BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015673
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/407 (67%), Positives = 333/407 (81%), Gaps = 10/407 (2%)
Query: 4 LRHIRRLCTATTAAGSSTTASS------ISVSKAKSKLRSEFDPDKALDIYSSVSKHYAS 57
LRH+R L TA AA +++TA++ ISVS+AKS LRSEFDPD+AL+IYSSVSKHY S
Sbjct: 9 LRHVRHLSTAAAAAAAASTAAASASSSSISVSRAKSILRSEFDPDRALEIYSSVSKHYTS 68
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
P++SRYAQDLTV+RLAKS+RF+DIETLIESHKNDPKITQEPYL LIRSYG AGMF HA+
Sbjct: 69 PLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAGMFQHAL 128
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
RTF+QM+ELGTPRS ISFNALL AC +S+L+D+VP F+EIP++Y + PDKISYG+L+KS
Sbjct: 129 RTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIXPDKISYGILVKS 188
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+C+SG SDKA+ +L EME KGVE+T VT+TT+L+ LYKQG ++ AE++W EM KKG LD
Sbjct: 189 YCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGC-LD 247
Query: 238 VAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
V AYNV+I +GGDPE +K LIDEM +AGLKPDTISYN+LMT YCK+ MMDEAKKVY
Sbjct: 248 VGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYAE 307
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
LEE GC PNA TFRT IY+LC SG+F+ YKVFK+S KIPDF T++ LVEGLV+KKK
Sbjct: 308 LEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKK 367
Query: 358 IKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLV---PAPAVGDGQKA 401
KEAKG+IRT+KK FP N L W+K+EE+LGL +PA D Q+A
Sbjct: 368 TKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQEA 414
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/405 (67%), Positives = 331/405 (81%), Gaps = 8/405 (1%)
Query: 4 LRHIRRLCTATTAAGSSTTASS----ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV 59
LRH+R L TA AA S+ AS+ ISVS+AKS LRSEFDPD+AL+IYSSVSKHY SP+
Sbjct: 9 LRHVRHLSTAAAAAASTAAASASSSSISVSRAKSILRSEFDPDRALEIYSSVSKHYTSPL 68
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+SRYAQDLTV+RLAKS+RF+DIETLIESHKNDPKITQEPYL LIRSYG AGMF HA+RT
Sbjct: 69 ASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAGMFQHALRT 128
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F+QM+ELGTPRS ISFNALL AC +S+L+D+VP F+EIP++Y + PDKISYG+L+KS+C
Sbjct: 129 FNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGVLPDKISYGILVKSYC 188
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+SG SDKA+ +L EME KGVE+T VT+TT+L+ LYKQG ++ AE++W EM KKG LDV
Sbjct: 189 ESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGC-LDVG 247
Query: 240 AYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
AYNV+I +GGDPE +K LIDEM +AGLKPDTISYN+LMT YCK+ M+DEAKKVY LE
Sbjct: 248 AYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELE 307
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
E GC PNA TFRT IY+LC SG+F+ YKVFK+S KIPDF T++ LVEGLV+KKK K
Sbjct: 308 ETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKKTK 367
Query: 360 EAKGVIRTIKKKFPPNVLRAWKKVEEELGLV---PAPAVGDGQKA 401
EAKG+IRT+KK FP N L W+K+EE+LGL +PA D Q+A
Sbjct: 368 EAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQEA 412
>gi|297798228|ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312834|gb|EFH43257.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 411
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/391 (66%), Positives = 318/391 (81%), Gaps = 6/391 (1%)
Query: 3 SLRHIRRLCTATTAAGSSTTASS---ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV 59
SLR +RR +A AA +TTA S ISVSKAKS LR E DPDKAL IY++VS H ASPV
Sbjct: 7 SLRLVRRFASA--AADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPV 64
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
SSRYAQ+LTVRRLAK +RFSDIETLIESHKNDPKI +EP+ LIRSYG+A MFDHAMRT
Sbjct: 65 SSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGRASMFDHAMRT 124
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN-LSPDKISYGLLLKSH 178
F+QMD+ GTPRS +SFNALL AC S+ +DKVP LFDEIP++YN + PDKISYG+L+KS+
Sbjct: 125 FEQMDQYGTPRSAVSFNALLNACLHSKKFDKVPQLFDEIPQRYNKIVPDKISYGILIKSY 184
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
CDSGS KA+E++ +M+ KG+EVTT+ +TT+L+ LYK+G E AE LW+EM KKG +LD
Sbjct: 185 CDSGSPQKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVAESLWNEMVKKGCELDN 244
Query: 239 AAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
AAYNVRI + PER+KELI+EM GLKPDTISYN+LMT YC+ M+DEAKKVYEGL
Sbjct: 245 AAYNVRIMSAQKESPERVKELIEEMSTMGLKPDTISYNYLMTAYCEKGMLDEAKKVYEGL 304
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E N C+PN+ TFRT I+HLC S +++ Y +FK+SV +HKIPDFNT+K L GLV+KKKI
Sbjct: 305 EGNNCAPNSATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLAVGLVEKKKI 364
Query: 359 KEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
+AKG+IRT+KKKFPP+ + AWKK+EEELGL
Sbjct: 365 DDAKGLIRTVKKKFPPSFMNAWKKLEEELGL 395
>gi|156070795|gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 246/370 (66%), Positives = 308/370 (83%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
+IS+SKAKSKL++E DPDKAL+IYSSVS Y SP+SSRYAQ+ TV+RLAKS RFSDIE
Sbjct: 30 TISISKAKSKLKAEHDPDKALEIYSSVSDRYVSPLSSRYAQEFTVKRLAKSHRFSDIENF 89
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
+ESHKN PKITQEP+L ++IRSYG AGMFDHA++ + QMD+LGTPRS ISFN LL AC R
Sbjct: 90 LESHKNSPKITQEPFLSSIIRSYGVAGMFDHALKIYHQMDDLGTPRSAISFNVLLSACVR 149
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
S+LYD+VP LFDEIP KY PDK+SYG+L++S+C+ GS + A+E L EME KGVE+T+V
Sbjct: 150 SKLYDRVPQLFDEIPVKYGFLPDKVSYGILIRSYCEMGSPEMAMERLKEMEEKGVEITSV 209
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR 264
T+TT+L+ YK+ ++EAE++W+EM +G DV AYNV+I N GGDPE +K LI+EM
Sbjct: 210 TFTTILHSFYKKRKSDEAEKVWNEMVNRGCGPDVGAYNVKIMNIQGGDPEGVKALIEEMN 269
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
DAGLKPDTISYN+LMTCYC+NE++DEA+KVY+ LE+NGC+PNA TFRT I++LC G F+
Sbjct: 270 DAGLKPDTISYNYLMTCYCRNELIDEAQKVYDDLEKNGCNPNAATFRTLIFYLCKKGRFE 329
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVE 384
YKVFKESV V KIPDF+T+K LVEGL KK K+K+AKG+ RT+KKKFPPN+++AW K+E
Sbjct: 330 TGYKVFKESVKVQKIPDFDTLKYLVEGLAKKSKLKDAKGMCRTVKKKFPPNLIKAWTKIE 389
Query: 385 EELGLVPAPA 394
EELGL A A
Sbjct: 390 EELGLAKAEA 399
>gi|15234493|ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein [Arabidopsis thaliana]
gi|7270616|emb|CAB80334.1| salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680 [Arabidopsis thaliana]
gi|24111267|gb|AAN46757.1| At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/391 (66%), Positives = 318/391 (81%), Gaps = 6/391 (1%)
Query: 3 SLRHIRRLCTATTAAGSSTTASS---ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV 59
SLR +RR +A AA +TTA S ISVSKAKS LR E DPDKAL IY++VS H ASPV
Sbjct: 7 SLRLVRRFASA--AADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPV 64
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
SSRYAQ+LTVRRLAK +RFSDIETLIESHKNDPKI +EP+ LIRSYGQA MF+HAMRT
Sbjct: 65 SSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRT 124
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN-LSPDKISYGLLLKSH 178
F+QMD+ GTPRS +SFNALL AC S+ +DKVP LFDEIP++YN + PDKISYG+L+KS+
Sbjct: 125 FEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSY 184
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
CDSG+ +KA+E++ +M+ KG+EVTT+ +TT+L+ LYK+G E A+ LW+EM KKG +LD
Sbjct: 185 CDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDN 244
Query: 239 AAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
AAYNVRI + PER+KELI+EM GLKPDTISYN+LMT YC+ M+DEAKKVYEGL
Sbjct: 245 AAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGL 304
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E N C+PNA TFRT I+HLC S +++ Y +FK+SV +HKIPDFNT+K LV GLV+ KK
Sbjct: 305 EGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKR 364
Query: 359 KEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
+AKG+IRT+KKKFPP+ L AWKK+EEELGL
Sbjct: 365 DDAKGLIRTVKKKFPPSFLNAWKKLEEELGL 395
>gi|2632061|emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/391 (66%), Positives = 318/391 (81%), Gaps = 6/391 (1%)
Query: 3 SLRHIRRLCTATTAAGSSTTASS---ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV 59
SLR +RR +A AA +TTA S ISVSKAKS LR E DPDKAL IY++VS H ASPV
Sbjct: 23 SLRLVRRFASA--AADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPV 80
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
SSRYAQ+LTVRRLAK +RFSDIETLIESHKNDPKI +EP+ LIRSYGQA MF+HAMRT
Sbjct: 81 SSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRT 140
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN-LSPDKISYGLLLKSH 178
F+QMD+ GTPRS +SFNALL AC S+ +DKVP LFDEIP++YN + PDKISYG+L+KS+
Sbjct: 141 FEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSY 200
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
CDSG+ +KA+E++ +M+ KG+EVTT+ +TT+L+ LYK+G E A+ LW+EM KKG +LD
Sbjct: 201 CDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDN 260
Query: 239 AAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
AAYNVRI + PER+KELI+EM GLKPDTISYN+LMT YC+ M+DEAKKVYEGL
Sbjct: 261 AAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGL 320
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E N C+PNA TFRT I+HLC S +++ Y +FK+SV +HKIPDFNT+K LV GLV+ KK
Sbjct: 321 EGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKR 380
Query: 359 KEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
+AKG+IRT+KKKFPP+ L AWKK+EEELGL
Sbjct: 381 DDAKGLIRTVKKKFPPSFLNAWKKLEEELGL 411
>gi|338762831|gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
Length = 417
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/404 (62%), Positives = 317/404 (78%), Gaps = 12/404 (2%)
Query: 3 SLRHIRRLCTATT------------AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSS 50
+L H R L T+ + +ST S+IS S+AKS+LR +DPDKAL+IYSS
Sbjct: 6 ALHHGRHLSTSAAAAAAAAVEAAGASTATSTKPSTISTSRAKSQLRYVYDPDKALEIYSS 65
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
VS +Y SP+SSRY Q+ TVRRLAKS RFSDIE+ +ESHKNDPKITQEP+L +LIRSYG A
Sbjct: 66 VSPNYTSPLSSRYTQEYTVRRLAKSHRFSDIESFLESHKNDPKITQEPFLSSLIRSYGLA 125
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GMFDHA++TF++MD+LGTPRS +SFNALL AC S+ + + P LFDE+P++Y LSPDK S
Sbjct: 126 GMFDHALKTFNEMDDLGTPRSTVSFNALLSACNSSKNFGRAPELFDEVPQRYGLSPDKFS 185
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
YG L+K++C+ GS + ALE L EME KG+E+T VT+TT+++ YK+G EEAER+WSEM
Sbjct: 186 YGNLIKAYCEMGSPESALERLKEMEEKGIEITAVTFTTIMHSFYKKGKNEEAERVWSEMV 245
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
K+G +DV AYNVRI + +G DP+ +K LI+E+ AGLKPDTISYN+LMT YCK+ MMDE
Sbjct: 246 KRGCPIDVGAYNVRIMHIHGEDPDSVKGLIEEISSAGLKPDTISYNYLMTSYCKSGMMDE 305
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A KVYE LE NGC PNA TFRT I++LC F+ YKVFKESV VHKIPDFNT+K L+E
Sbjct: 306 AFKVYEDLEGNGCKPNAATFRTLIFYLCKRQRFETGYKVFKESVAVHKIPDFNTLKHLLE 365
Query: 351 GLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPA 394
GLVK+ K KEAKG+IRT+KKKFPPNV++AW+++++ELGLV A
Sbjct: 366 GLVKRSKFKEAKGMIRTVKKKFPPNVVKAWERLQKELGLVSVEA 409
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/395 (63%), Positives = 319/395 (80%), Gaps = 1/395 (0%)
Query: 3 SLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
+ RH R L T T AA +++T ++IS+SKAKSKL++E DPDK L+IYSSVS Y SP+SSR
Sbjct: 6 AFRHARHLSTTTAAAATTSTTATISISKAKSKLKAEHDPDKVLEIYSSVSDRYISPLSSR 65
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
YAQ+ TV+RLAKS RFSDIE+ +ESHKN KITQEP+L ++IRSYG AGMFDHA++ +DQ
Sbjct: 66 YAQEYTVKRLAKSHRFSDIESFLESHKNSSKITQEPFLSSIIRSYGIAGMFDHALKIYDQ 125
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
MD+LGTPRS ISFN LL AC ++ YD+V LFDE+P KY PDK+SYG+L++S+C+ G
Sbjct: 126 MDDLGTPRSAISFNVLLSACVNTKQYDRVRQLFDEMPVKYGFLPDKVSYGILIRSYCEMG 185
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+KA+E L EME KGVE+T +T+TT+L+ YK+G +EAE++W+EM KG DV AYN
Sbjct: 186 LPEKAMERLKEMEEKGVEITAITFTTLLHAFYKKGMGDEAEKVWNEMVNKGCGPDVGAYN 245
Query: 243 VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
V+I N GGDPE +K LI+EM +AGLKPDTISYN+LMTCYC+N +MDEA+KVYE LE NG
Sbjct: 246 VKIRNIQGGDPEGVKALIEEMNNAGLKPDTISYNYLMTCYCENGLMDEAQKVYEDLETNG 305
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C+PNA TFR+ I +LC G F+ YKVFKESV V+K+PDFNT+K LVEGLVK++K+K+AK
Sbjct: 306 CNPNAATFRSLILYLCKKGRFETGYKVFKESVRVNKMPDFNTLKCLVEGLVKREKLKDAK 365
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEELGLVPAPAVGD 397
G+ RT+KKKFPPN+++AW K+EEELGL VGD
Sbjct: 366 GMSRTVKKKFPPNLVKAWAKLEEELGLAKV-EVGD 399
>gi|156070758|gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/392 (62%), Positives = 310/392 (79%)
Query: 3 SLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
+LR R L TA AA S +A++IS+SKAKSKL++E DPDKAL+IYSSVS Y SP+SSR
Sbjct: 6 ALRQARHLTTAAAAAAESASAATISISKAKSKLKAEHDPDKALEIYSSVSDRYISPLSSR 65
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
YAQ+ V+RLAKS RFSDIE +ESHKN PKITQEP+L ++IRSYG A MFDHA++ + Q
Sbjct: 66 YAQEYIVKRLAKSHRFSDIENFLESHKNSPKITQEPFLSSIIRSYGVARMFDHALKIYHQ 125
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
MD+LGTPRS ISFN LL AC S+LYD+V LFDEIP KY PDK+SYG+L++S+C+ G
Sbjct: 126 MDDLGTPRSAISFNVLLSACMHSKLYDRVAQLFDEIPVKYGFLPDKVSYGVLIRSYCEMG 185
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ A+E EME KGVE+T V +TT+L+ YK+G ++EAER+W+EM +G DV AYN
Sbjct: 186 LPEMAMERFKEMEEKGVEITAVAFTTILHSFYKKGKSDEAERVWNEMVSRGCGPDVGAYN 245
Query: 243 VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
V+I N G PE +K LI+EM +AGLKPDTISYN+LMTCYCKN++MDEA+KVYE L+ NG
Sbjct: 246 VKIMNIQGSKPEGVKALIEEMSNAGLKPDTISYNYLMTCYCKNQLMDEAQKVYEDLKTNG 305
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C+PNA TFRT I++LC G F+ YKVF+ESV VHKIPDF T+K LVEGLVKK + ++AK
Sbjct: 306 CNPNAATFRTLIFYLCKKGRFETGYKVFRESVSVHKIPDFITLKYLVEGLVKKSRWRDAK 365
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEELGLVPAPA 394
G+ RT+KKKFPPN+++AW K+EE+LGL A
Sbjct: 366 GMSRTVKKKFPPNLVKAWIKLEEDLGLAKVEA 397
>gi|224094727|ref|XP_002310210.1| predicted protein [Populus trichocarpa]
gi|222853113|gb|EEE90660.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 242/389 (62%), Positives = 307/389 (78%), Gaps = 10/389 (2%)
Query: 2 TSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASP-VS 60
++LRH+R L STT IS++KAKS+LR+E DPDKAL I+SS S + +SP V
Sbjct: 3 STLRHLRHL---------STTTQKISITKAKSRLRTEHDPDKALAIFSSASSNDSSPPVV 53
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
SRYAQDLTVRRLAKS RF+DIE+L+ESHK+DPKI QEP+L +LIRSYG AGMFD A++T+
Sbjct: 54 SRYAQDLTVRRLAKSHRFADIESLMESHKSDPKIKQEPFLSSLIRSYGVAGMFDQALKTY 113
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+MD+LGTPRS ISFNALL AC +S+LY KVP+LF+EI +KY + PD +SYG+L+K++C+
Sbjct: 114 QEMDQLGTPRSCISFNALLSACIQSKLYKKVPVLFNEISEKYRVLPDTVSYGMLVKAYCE 173
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G +KA+E+L EME KGVEVT + T VLNCLY +G +EAER M ++G +LD
Sbjct: 174 DGKPEKAIEVLGEMEKKGVEVTAIVCTPVLNCLYSKGKKDEAERFLDGMVERGCELDAVV 233
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
YNV+I+N PER+KELI+EM GLKPDTISYN+LMT YC + MM+EAKKVYE
Sbjct: 234 YNVKISNAVSQGPERVKELIEEMESYGLKPDTISYNYLMTSYCTSGMMEEAKKVYEEFRV 293
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+GC NA TFRT +++LC SG ++K Y++FK+SV VH+IPDFNT+K LV+GLV+KKKIKE
Sbjct: 294 HGCKANAATFRTLVFNLCKSGEYEKGYEIFKDSVKVHRIPDFNTLKYLVKGLVEKKKIKE 353
Query: 361 AKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
AKG+IRT+KKKFP N+L AWKKVEE LGL
Sbjct: 354 AKGLIRTMKKKFPLNLLNAWKKVEENLGL 382
>gi|224134358|ref|XP_002327818.1| predicted protein [Populus trichocarpa]
gi|222836903|gb|EEE75296.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 249/371 (67%), Positives = 303/371 (81%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF 78
++T SIS+SKAKSKLR+E DPDKAL IYS+ S + +SP +SRYAQDLTVRRLA S RF
Sbjct: 13 TTTQKISISISKAKSKLRTEHDPDKALAIYSAASNNDSSPAASRYAQDLTVRRLATSHRF 72
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
+DIE+LIES K DPKI QEP+L +LIRSYG AGMFD AM+T+ QMD+LGTPRS ISFNAL
Sbjct: 73 TDIESLIESRKTDPKIKQEPFLSSLIRSYGVAGMFDQAMKTYHQMDQLGTPRSSISFNAL 132
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L AC +SRLY+KVP LFDEI +KY + PDK+SYG+L+KS+C+ G DKA E+L EME KG
Sbjct: 133 LSACVQSRLYNKVPGLFDEISEKYRVLPDKVSYGILVKSYCEDGKPDKANEVLREMEKKG 192
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE 258
VEVTTV YTT+LNCLY +G EEAER W M K+G +LD A YNV+I+N PER+KE
Sbjct: 193 VEVTTVVYTTLLNCLYSKGKNEEAERFWHAMVKRGCELDAAVYNVKISNAMKQGPERVKE 252
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
LI++M ++ LKPDTISYN+L+T YC MM++AKKVYEGLE GC NA TFRT ++HLC
Sbjct: 253 LIEDMENSALKPDTISYNYLITSYCMTGMMEDAKKVYEGLEGYGCKANAATFRTLVFHLC 312
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLR 378
+G ++K Y++FKESV VH+IPDFNT+K L EGL +KKK+KEAKG+IRT+KKKFPPN+L
Sbjct: 313 KNGEYEKGYRLFKESVRVHRIPDFNTLKYLAEGLAEKKKMKEAKGLIRTMKKKFPPNLLN 372
Query: 379 AWKKVEEELGL 389
AWKKVEE LGL
Sbjct: 373 AWKKVEESLGL 383
>gi|18398767|ref|NP_565439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216725|sp|Q9ZU67.1|PP162_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g18520, mitochondrial; Flags: Precursor
gi|4218007|gb|AAD12215.1| expressed protein [Arabidopsis thaliana]
gi|21617890|gb|AAM66940.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
gi|330251683|gb|AEC06777.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 418
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/405 (59%), Positives = 303/405 (74%), Gaps = 11/405 (2%)
Query: 4 LRHIRRLCTATTAAGSSTTA--SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS 61
LR +RR TAT S TTA +I++SKAKSKLR DPDKAL IY SVS + SP+SS
Sbjct: 8 LRFLRRFSTAT-GIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSS 66
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
RYA +LTV+RLAKS+RFSDIE LIESHKN+PKI E +L LIRSYG+A MFDHAM+ F+
Sbjct: 67 RYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFE 126
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY-NLSPDKISYGLLLKSHCD 180
+MD+LGTPR+V+SFNALL AC S L+++VP LFDE P++Y N++PDKISYG+L+KS+CD
Sbjct: 127 EMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCD 186
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
SG +KA+E++ +ME KGVEVT + +TT+L LYK G +EAE LW EM KG DLD
Sbjct: 187 SGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTV 246
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
YNVR+ N PER+KEL++EM GLKPDT+SYN+LMT YC MM EAKKVYEGLE+
Sbjct: 247 YNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ 306
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
PNA TFRT I+HLC +G +D+ VFK+S +VHKIPDF T K L EGLVK ++++
Sbjct: 307 ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMED 362
Query: 361 AKGVIRTIKKKFPPNVLRAWKKVEEELGLVP---APAVGDGQKAR 402
A+GV R +KKKFPP ++ WKK+EE+LGL A AV + R
Sbjct: 363 ARGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAAAVSSSSQTR 407
>gi|297836596|ref|XP_002886180.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332020|gb|EFH62439.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 421
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/387 (59%), Positives = 302/387 (78%), Gaps = 8/387 (2%)
Query: 4 LRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRY 63
LR +RR +TAA ++ ++ +I++SKAKSKLR DPDKAL IY SVS + +SP+SSRY
Sbjct: 8 LRFLRRF---STAAATNVSSGAITISKAKSKLRKVHDPDKALAIYKSVSNNSSSPLSSRY 64
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A +LTV+RLAKS+RFSDIE LIESHKN+PKI E +L LIRSYG+A MFDHAM+ F++M
Sbjct: 65 AMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEM 124
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY-NLSPDKISYGLLLKSHCDSG 182
D++GTPR+V+SFNALL AC S L+++VP LFDEIP++Y N++PDK+SYG+L+KS+CDSG
Sbjct: 125 DQIGTPRTVVSFNALLAACLHSDLFERVPQLFDEIPQRYNNITPDKVSYGMLIKSYCDSG 184
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S +KA+E++ +ME KGVEVT + +TT+L LYK G + AE LW+EM KG +LD YN
Sbjct: 185 SPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDVAESLWTEMVNKGCELDNTVYN 244
Query: 243 VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
VR+ N PER++EL++EM GLKPDT+SYN+LMT YC MM EAKKVYEGLE+
Sbjct: 245 VRLMNAAKESPERVEELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMGEAKKVYEGLEQ-- 302
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
PNA TFRT I+ LC +G +D+ VFK+S +VHKIPDF T K L EGLVK ++++A+
Sbjct: 303 --PNAATFRTLIFRLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDAR 360
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEELGL 389
GV RT+KKKFPP ++ WKK+EE+LGL
Sbjct: 361 GVARTVKKKFPPRLVTEWKKLEEKLGL 387
>gi|297735184|emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/405 (60%), Positives = 293/405 (72%), Gaps = 51/405 (12%)
Query: 4 LRHIRRLCTATTAAGSSTTASS----ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV 59
LRH+R L TA AA S+ AS+ ISVS+AKS LRSEFDPD+AL+IYSSVSKHY SP+
Sbjct: 9 LRHVRHLSTAAAAAASTAAASASSSSISVSRAKSILRSEFDPDRALEIYSSVSKHYTSPL 68
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+SRYAQDLTV+RLAKS+RF+DIETLIESHKNDPKITQEPYL LIRSY
Sbjct: 69 ASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSY------------ 116
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
VP F+EIP++Y + PDKISYG+L+KS+C
Sbjct: 117 -------------------------------VPKFFEEIPRRYGVLPDKISYGILVKSYC 145
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+SG SDKA+ +L EME KGVE+T VT+TT+L+ LYKQG ++ AE++W EM KKG LDV
Sbjct: 146 ESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGC-LDVG 204
Query: 240 AYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
AYNV+I +GGDPE +K LIDEM +AGLKPDTISYN+LMT YCK+ M+DEAKKVY LE
Sbjct: 205 AYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELE 264
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
E GC PNA TFRT IY+LC SG+F+ YKVFK+S KIPDF T++ LVEGLV+KKK K
Sbjct: 265 ETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEGLVQKKKTK 324
Query: 360 EAKGVIRTIKKKFPPNVLRAWKKVEEELGLV---PAPAVGDGQKA 401
EAKG+IRT+KK FP N L W+K+EE+LGL +PA D Q+A
Sbjct: 325 EAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQEA 369
>gi|156070774|gb|ABU45188.1| unknown [Capsicum frutescens]
Length = 373
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/387 (58%), Positives = 277/387 (71%), Gaps = 35/387 (9%)
Query: 3 SLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
+LRH R L TA A KL++E DPDKAL IYSSVS Y SP+SSR
Sbjct: 6 ALRHARFLTTA-----------------AMPKLKAEHDPDKALQIYSSVSDRYISPLSSR 48
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
YAQ+ TV+RLAKS RFSD E +ESHKN KITQEP+L ++IRSYG AGMFDHA++ Q
Sbjct: 49 YAQEYTVKRLAKSHRFSDSENFLESHKNSSKITQEPFLSSIIRSYGVAGMFDHALKICHQ 108
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
MD LGTPRS ISFN LL AC S+LYD+V LFDE+P + L+K C G
Sbjct: 109 MDHLGTPRSAISFNVLLSACVHSKLYDRVAQLFDEMPVSMDF--------YLIK--CPMG 158
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
L EM+ K VE+TTV +TT+L+ YK+G ++EAER+W+EM KG DV AYN
Sbjct: 159 --------LKEMDEKDVEITTVAFTTILHSFYKKGKSDEAERVWNEMVNKGCGPDVGAYN 210
Query: 243 VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
V+I N GGDPE +K LI+EM DAGLKPDTISYN+LMTCY +NE+M+E +KVYE LE NG
Sbjct: 211 VKIMNIQGGDPEGVKALIEEMSDAGLKPDTISYNYLMTCYFRNELMNEVQKVYEDLEANG 270
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C+PNA TFRT I++L G ++ YKVFKESV V+KIPDFNT++ LVEGLVK+ K+ EAK
Sbjct: 271 CNPNAATFRTLIFYLSKKGKYEAGYKVFKESVRVNKIPDFNTLEYLVEGLVKRSKLNEAK 330
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEELGL 389
+ +T+KKKFPPN+++AW K+EEELGL
Sbjct: 331 RMSKTVKKKFPPNLVKAWTKLEEELGL 357
>gi|357150324|ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Brachypodium distachyon]
Length = 468
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 236/368 (64%), Gaps = 6/368 (1%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
+S S AK++LR E+D D+A+ + ++ S S+R+A L RRL+++ RF+D E L+
Sbjct: 36 LSASAAKTRLRREYDADRAVSLLDAIDTASLSAASTRHALSLAARRLSRAGRFADAEALL 95
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTR 144
SH P EP+L ++ SY A + + A+ F L +P S + FNALL A R
Sbjct: 96 SSHI--PASPTEPHLSAILCSYASAALPEKALEAFRSAAPSLPSPISPMPFNALLSAFVR 153
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
R + +VP+LF E+ K+++++PD SYG+L+K+HC KA E+L +M +G+ TT
Sbjct: 154 CRRHRRVPVLFTELSKEFSITPDATSYGILVKAHCMVRHDAKAHEVLAQMREEGISPTTT 213
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDE 262
+TT+++ +YKQ EEAE LW +M + G D A YNV+ N +G G PE + ++ E
Sbjct: 214 IFTTMIDSMYKQKKIEEAETLWKQMLESGCKPDQATYNVKAMN-FGLHGKPEDVLLVMAE 272
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M AG+KPDTI+YNFLMT YCKN +++AK +Y L GCSPNA T++ + +L G+
Sbjct: 273 MEAAGVKPDTITYNFLMTSYCKNGKVEDAKGLYHSLGAKGCSPNAATYKHMMAYLFAHGD 332
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKK 382
FD A K+F+ES+ HK+PDF T+K VEGL K K+ EAK VI +KK FP N+L WKK
Sbjct: 333 FDAAMKIFRESLSKHKVPDFKTMKGFVEGLAKGGKVAEAKDVISEVKKMFPENLLSGWKK 392
Query: 383 VEEELGLV 390
+E+ELGL+
Sbjct: 393 LEKELGLI 400
>gi|115447457|ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|49388176|dbj|BAD25302.1| membrane-associated salt-inducible protein like [Oryza sativa
Japonica Group]
gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|125540409|gb|EAY86804.1| hypothetical protein OsI_08180 [Oryza sativa Indica Group]
gi|125582977|gb|EAZ23908.1| hypothetical protein OsJ_07630 [Oryza sativa Japonica Group]
gi|215693356|dbj|BAG88738.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/378 (42%), Positives = 236/378 (62%), Gaps = 8/378 (2%)
Query: 14 TTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLA 73
TTAAG ++ S AK++LR E DPD+ + ++ ++ S S+R+A L RRL+
Sbjct: 27 TTAAGEQ----PLTASAAKTRLRREHDPDRVVSLFEAIDDASLSASSTRHALSLAARRLS 82
Query: 74 KSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF-DQMDELGTPRSV 132
+S+RF+D E L+ SH P EP L ++ SY A + + A+ F L +P S
Sbjct: 83 RSRRFADAEALLSSHI--PASPTEPQLAAVLCSYAAASLPEKALAAFRSAAPSLPSPISP 140
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
+ FNA+L R R + +VP+LFDE+ K+++++PD SYG+L+K++C KA E+L+
Sbjct: 141 LPFNAVLSVFLRCRRHRRVPVLFDELSKEFSITPDASSYGILVKAYCMLSKDAKAHEVLD 200
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGG 251
+M +G T YTT+++ +YKQ E+AERLW +M + G D A YN +I + + G
Sbjct: 201 QMRGQGFTPTNSIYTTMIDSMYKQKKMEQAERLWKQMLESGRKPDQAVYNTKIMHHSLHG 260
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E + E+I EM +AG+KPDTI+YNFLMT YCK+ M+ AK++Y L E GCS NA T++
Sbjct: 261 KTEDVLEVIAEMEEAGVKPDTITYNFLMTSYCKHGKMETAKELYRSLGEKGCSANAATYK 320
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ LC G+ D A +FKES +K+PDF T+ LVEGL K ++ EAK ++ +KKK
Sbjct: 321 HMMAQLCAHGDLDGALVIFKESYRSNKVPDFRTMSGLVEGLTKAGRVAEAKNIVAKMKKK 380
Query: 372 FPPNVLRAWKKVEEELGL 389
FP +L W K+E+ELGL
Sbjct: 381 FPEQLLSGWMKLEKELGL 398
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 229/386 (59%), Gaps = 4/386 (1%)
Query: 6 HIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ 65
H RRL +A + T + S AK +LR E DPD+ + I ++ S S+R+A
Sbjct: 17 HGRRLSSALSTTTGGTDPGATPFSDAKRQLRRERDPDRVVSILDAIDTASISAASTRHAL 76
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF-DQMD 124
L RRL+ S+RF++ E L+ SH E +L ++ Y A + + A+ F
Sbjct: 77 SLAARRLSLSRRFAEAEALLSSHLT--ASNTETHLAAVLCCYAAANLPEKAIDAFRSAAP 134
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
L P S + FNALL R R Y +VP+LF E+ K+++++PD SY +L+K++C +
Sbjct: 135 SLPAPISPLPFNALLSTFVRCRRYRRVPVLFAELSKEFSITPDATSYAILVKAYCMNRDD 194
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
KA ++L+ M +G+ T YT++++ +YK+ EAE LW EM + G + DV YNV+
Sbjct: 195 AKAKQVLDLMREQGISPTASIYTSLIDSMYKRKMTNEAESLWKEMVESGCEPDVVTYNVK 254
Query: 245 -ITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ G PE + E++ EM AGLKP+TI+YN+LM YCK+ +++AK +Y L E GC
Sbjct: 255 ALYYMAHGKPEEVIEVMTEMEAAGLKPNTITYNYLMISYCKSGKLEDAKVLYHSLAEKGC 314
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
S +A T++ + LC G+FD +FK+S+ K+PDF T+K LVEGL K ++ +AK
Sbjct: 315 SADAYTYKHMLAELCAHGDFDAGLGIFKDSLKKRKVPDFRTMKRLVEGLAKGGRVADAKE 374
Query: 364 VIRTIKKKFPPNVLRAWKKVEEELGL 389
VI +K FP N+L WKKVE+ELGL
Sbjct: 375 VIAEVKNMFPENLLSGWKKVEKELGL 400
>gi|212275364|ref|NP_001130677.1| uncharacterized protein LOC100191780 [Zea mays]
gi|194707568|gb|ACF87868.1| unknown [Zea mays]
gi|195624402|gb|ACG34031.1| membrane-associated salt-inducible protein like [Zea mays]
gi|195653371|gb|ACG46153.1| membrane-associated salt-inducible protein like [Zea mays]
gi|413937895|gb|AFW72446.1| putative membrane-associated salt-inducible protein [Zea mays]
Length = 471
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 228/367 (62%), Gaps = 4/367 (1%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
+I++S AK +L E DPD+ + I ++ S S+R+A L RRL++S+RF+D E L
Sbjct: 39 AITLSDAKRQLLRERDPDRVVSILDAIDTASISAASTRHALSLAARRLSRSRRFADAEAL 98
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACT 143
+ SH T E +L ++ SY A + + A+ F L TP S + FNALL
Sbjct: 99 LSSHLT--ASTTEAHLAAVLCSYASANLPEKAIDAFRSAAPSLPTPNSPLPFNALLSTFI 156
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R R Y +VP+LF E+ K+++++P+ SYG+L+K++C + KA + L+ M +G+ T
Sbjct: 157 RCRRYRRVPVLFAELSKEFSITPNATSYGILVKAYCMARDDAKAKQALDLMREQGISPTN 216
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR-ITNTYGGDPERLKELIDE 262
YTT+++ +YK+ EAE LW EM + + DVA YNV+ + G PE + E++ E
Sbjct: 217 RIYTTLIDSMYKRKMTNEAESLWKEMVESECEPDVATYNVKAMYYALHGKPEEVMEVMTE 276
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M AG+KPDT +YNFLMT YCK+ +++AK +Y L E GCS +A T++ + LC G+
Sbjct: 277 MEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSLAEKGCSADAATYKHMLAELCAYGD 336
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKK 382
FD +FK+S+ K+PDF T+K LVEGL K ++ +AK V+ +KK FP N+L WKK
Sbjct: 337 FDAGLGIFKDSLKRRKVPDFRTMKGLVEGLAKGGRVADAKEVVAEVKKMFPENLLSGWKK 396
Query: 383 VEEELGL 389
VE+ELGL
Sbjct: 397 VEKELGL 403
>gi|359496216|ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 183/301 (60%), Gaps = 2/301 (0%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TVRRLA +KRF IE ++E K I++E + LI YG++GMFDHA + FD+M +
Sbjct: 65 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQK 124
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
RSV+SFNALL AC S+ +DKV F E+P K ++ PD +SY +++K CD GS D A
Sbjct: 125 CERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSMDSA 184
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ +L+EME K +E +T+ T+LN Y G + E++W MEKK + D+ +YN ++
Sbjct: 185 VGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVG 244
Query: 248 TYGGDPERLK--ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ L+ L++EM+ G+KPD S+N L+ +C + +DEA Y + EN CSP
Sbjct: 245 LVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSP 304
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ TF T + C G+FD+A+++ KE + D ++ V+GLVK K+ EAK ++
Sbjct: 305 DKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLV 364
Query: 366 R 366
+
Sbjct: 365 Q 365
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 228 EMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
E +KK D+ + VR+ + YG G + ++ DEM D + +S+N L+ +
Sbjct: 83 EEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHS 142
Query: 286 EMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ D+ + + L P+ ++ I LC G+ D A + E PD T
Sbjct: 143 KKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLIT 202
Query: 345 VKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
L+ G + + + + R KK P++
Sbjct: 203 FNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDI 235
>gi|147791424|emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
Length = 383
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 182/301 (60%), Gaps = 2/301 (0%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TVRRLA +KRF IE ++E K I++E + LI YG++GMFDHA + FD+M +
Sbjct: 65 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQK 124
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
RSV+SFN LL AC S+ +DKV F E+P K ++ PD +SY +++K CD GS D A
Sbjct: 125 CERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSYNIVIKGLCDMGSMDSA 184
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ +L+EME K +E +T+ T+LN Y G + E++W MEKK + D+ +YN ++
Sbjct: 185 VGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVG 244
Query: 248 TYGGDPERLK--ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ L+ L++EM+ G+KPD S+N L+ +C + +DEA Y + EN CSP
Sbjct: 245 LVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSP 304
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ TF T + C G+FD+A+++ KE + D ++ V+GLVK K+ EAK ++
Sbjct: 305 DKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKLV 364
Query: 366 R 366
+
Sbjct: 365 Q 365
>gi|359496226|ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 182/302 (60%), Gaps = 5/302 (1%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TVRRLA +KRF IE ++E K I++E + LI YG++GMFDHA + FD+M +
Sbjct: 65 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLITLYGKSGMFDHAFKVFDEMPDQK 124
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
RSV+SFNALL AC S+ +DKV F E+P K ++ PD +SY +++ CD GS D A
Sbjct: 125 CERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSYNIVINGLCDMGSMDSA 184
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ +L+EME K +E +T+ T+LN Y G + E++W MEKK + D+ +YN ++
Sbjct: 185 VGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVG 244
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+R+ E L++EM+ G+KPD S+N L+ +C + +DEA Y + EN C
Sbjct: 245 LVS--EKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCL 302
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ TF T + C G+FD+A+++ KE + D ++ V+GLVK K+ EAK +
Sbjct: 303 PDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVDGLVKGGKVVEAKKL 362
Query: 365 IR 366
++
Sbjct: 363 VQ 364
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 33/198 (16%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ + SG D A ++ +EM ++ E + +++ +L ++ E +SE+
Sbjct: 100 LITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSEL---- 155
Query: 234 VDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
P +L ++PD +SYN ++ C MD A
Sbjct: 156 -------------------PSKL----------SVEPDLVSYNIVINGLCDMGSMDSAVG 186
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + +E+ P+ TF T + SG F K++ + +PD + + GLV
Sbjct: 187 MLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLV 246
Query: 354 KKKKIKEAKGVIRTIKKK 371
+K++ E G++ ++ K
Sbjct: 247 SEKRMLEGIGLVEEMQTK 264
>gi|449468996|ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 220/387 (56%), Gaps = 17/387 (4%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSI--SVSKAKS-------KLRSEFDPDKALDIYSSV 51
M SLR IRR C A T S+ T +++ V +KS KL++E DP+K ++ +
Sbjct: 1 MLSLRPIRRFCHAATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKA- 59
Query: 52 SKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAG 111
+ H + +R+A + TV RLA ++RF IE L+E K P+ +E ++ +I YG+A
Sbjct: 60 NAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAE 119
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
M HA+ TF M G R+V SFNA+L +SR + E P+K+++ D IS
Sbjct: 120 MIKHALDTFYDMHLYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISV 179
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L+K+ CD G ++A L+ EME G++ VTYTT+++ YK +E + LW+ M
Sbjct: 180 NILVKAFCDFGFLNRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVL 239
Query: 232 KGVDLDVAAYNVRITNTY----GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+G ++ +NVRI + D +L ++ MR+ G+ PD ++YN ++ +C+ +
Sbjct: 240 RGCLPNLTTFNVRIQHLIERRRAWDANKLMKM---MRNIGIVPDEVTYNLVIKGFCQAGL 296
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D AK+VY L +G PN ++T I++LC S +F+ A+ + K+++ + P+ +T+
Sbjct: 297 LDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHS 356
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPP 374
L++GL K + +A+ ++ +K+ PP
Sbjct: 357 LLKGLNKMGEAGKAQLILALARKRVPP 383
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 224/387 (57%), Gaps = 7/387 (1%)
Query: 6 HIRRLCTATT--AAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
IR L +A+T + S T +S SKA S L+SE DPD+ L+I + S + R
Sbjct: 22 QIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRI-DR 80
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESH-KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
A V LA+ K FS + L++ +N P + E + + I Y QA M DH++R F
Sbjct: 81 IAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFR 140
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+++ R+V S NALLFAC ++ Y + ++ E+PK Y + PD +Y ++K C+S
Sbjct: 141 DLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCES 200
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
GS+ + ++ EME KG++ + ++ +++ Y + ++E ++ + M+ +GV++ V+ Y
Sbjct: 201 GSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTY 260
Query: 242 NVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N+RI + + K L+D M AG+KP+T++Y+ L+ +C + +EAKK+++ +
Sbjct: 261 NIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVN 320
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
GC P++ + T IY+LC G+F+ A + KES+ + +P F+ +K LV GL K K++E
Sbjct: 321 RGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEE 380
Query: 361 AKGVIRTIKKKFPPNVLRAWKKVEEEL 387
AK +I +K+KF NV W +VE L
Sbjct: 381 AKELIGQVKEKFTRNV-ELWNEVEAAL 406
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 127/356 (35%), Positives = 205/356 (57%), Gaps = 15/356 (4%)
Query: 13 ATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRL 72
AT + S TA+ ++ KL F I +S SK + + D TVR L
Sbjct: 35 ATKKSKKSPTATPLTDENRLQKLVQRF-------IINSESKQFRRKNDT---YDSTVRFL 84
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
A K+FS IE +IE+ K +I +E ++ LIR YG+AGMF A + FD++ EL R+V
Sbjct: 85 AVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTV 144
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
SFNALL +C +S+ +D+V +F E+P++ ++ D SY +++ ++C+ DKA+ N
Sbjct: 145 RSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFN 204
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD 252
ME G+E VT+ T+L LY++G + E +W+ ME K + D+ +YN R+
Sbjct: 205 HMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVLD- 263
Query: 253 PERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+R++ EL+ +M + +KPD YN L+T +CK+ ++EAKK Y L+E+ PNATT
Sbjct: 264 -KRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATT 322
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+RT + LC G+FD ++ KE++ + V+ +V+GL + K +EAK ++
Sbjct: 323 YRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDLV 378
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 212/377 (56%), Gaps = 13/377 (3%)
Query: 1 MTSL-RHIRRLCTATTAAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASP 58
M+SL R +R + T+ A + T A +I S + S L+ D K SS SK +
Sbjct: 1 MSSLARRLRGIFTSPLPATTKTPAKTIKRSSSNNSSLKEMVDKFKK----SSDSKRF--- 53
Query: 59 VSSRYAQ-DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
SRY + V LAK+K+FS IE ++E K +I+ E + L+ YG+AGMF+HA
Sbjct: 54 -RSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAH 112
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ FD++ +L R+V+SFNALL C S+ +DK+ F E+P + PD +SY +++ +
Sbjct: 113 KLFDELPKLNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNA 172
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
C+ GS D AL +L+EME G+E +T+ T+LN Y+ G+ + E++W M+K V +
Sbjct: 173 FCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPN 232
Query: 238 VAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
V +YN ++ + ELIDEM+ +G+KPD + N LM +C ++EAK+ Y
Sbjct: 233 VRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYS 292
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ N P T+ T I L G+FD A ++ KE + + ++ ++EGLVK+
Sbjct: 293 EIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKES 352
Query: 357 KIKEAKGVIRTIK-KKF 372
KI+EA ++ K KKF
Sbjct: 353 KIEEATELVELAKLKKF 369
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 175/295 (59%), Gaps = 1/295 (0%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TVRRLA +KRF IE ++E K I++E + LI YG++GMFDHA + FD+M +
Sbjct: 73 TVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQK 132
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
RSV+SFNALL AC S+ +DK+ F E+P + PD +SY +++ + C+ GS D A
Sbjct: 133 CERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDSA 192
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L +L+EME G+E +T+ T+LN Y+ G+ + E++W M+K V +V +YN ++
Sbjct: 193 LSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLRG 252
Query: 248 TYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ ELIDEM+ +G+KPD + N LM +C ++EAK+ Y + N P
Sbjct: 253 VISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPV 312
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ T I L G+FD A ++ KE + + ++ ++EGLVK+ KI+EA
Sbjct: 313 RATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEA 367
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK- 232
L+ + SG D A ++ +EM ++ E + +++ +L ++ + + E+
Sbjct: 108 LISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNL 167
Query: 233 GVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
GV DV +YN+ I N + G + ++DEM GL+PD I++N L+ + +N +
Sbjct: 168 GVVPDVVSYNI-IVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYAD 226
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
+K+++ +++N +PN ++ + + +A ++ E PD T+ L++
Sbjct: 227 GEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMK 286
Query: 351 GLVKKKKIKEAKGVIRTI-KKKFPP 374
G ++EAK I + + PP
Sbjct: 287 GFCNAGNLEEAKRWYSEIARNELPP 311
>gi|449454724|ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449471723|ref|XP_004153390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449530564|ref|XP_004172264.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 213/383 (55%), Gaps = 3/383 (0%)
Query: 6 HIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ 65
H R L T + S+ ++ A S L++E +P++ +DI + S + R A
Sbjct: 23 HYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPERIIDICRAASLTPEFHLD-RIAF 81
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ + +L+K K F I +E K+ P + E + C+ I YGQA M DHA+RTF Q+DE
Sbjct: 82 SVAISKLSKFKHFDGIRRFLEELKSRPDLKNERFACHAIVLYGQANMLDHAIRTFKQIDE 141
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
LG SV + NALLFAC ++ Y ++ ++ E PK Y + PD +Y ++K+ +SGSS
Sbjct: 142 LGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYGIEPDIDTYNRVIKAFSESGSSS 201
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
++ EM+ K V+ T+ L Y + E+ E++ + MEK GV VA YN RI
Sbjct: 202 SVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVEKVLNLMEKYGVRRGVATYNARI 261
Query: 246 TNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ K L D M G+ P++++Y L+ +CK +DEAK +++ + +GC
Sbjct: 262 RSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGFCKEGNLDEAKSIFKRMINSGCQ 321
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P++ + T Y LC G+++ A+K+ ES+ +P+F+T+K LV+GLV K++EAK +
Sbjct: 322 PDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNFSTMKSLVDGLVSISKVEEAKQL 381
Query: 365 IRTIKKKFPPNVLRAWKKVEEEL 387
I IK++F NV W ++E L
Sbjct: 382 IGQIKERFSKNV-EKWSEIEAGL 403
>gi|255555097|ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542431|gb|EEF43973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 214/370 (57%), Gaps = 16/370 (4%)
Query: 4 LRHIRRLCTATT--AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS 61
+R + R C+ +T G++ ASS+ V L E + + ++ + S++ +
Sbjct: 5 IRLLSRTCSTSTQLTTGTAARASSVKV------LYKERNLKRLVEKFKKFSENDRFRTKT 58
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
++ T+RRLA +KRF+ IE ++E K I +E Y LIR YG++ MFD++ + FD
Sbjct: 59 GIYEE-TIRRLAIAKRFNWIEEILEDQKKYKDIHKEGYNARLIRLYGKSNMFDNSRKVFD 117
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M + R+V+SFNALL AC S+ +D+V LF ++PK+ + PD +SY ++K +C+
Sbjct: 118 EMPDRNCKRTVVSFNALLAACVTSKKFDEVDGLFRKLPKELEIKPDTVSYNTVIKGYCEM 177
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G+ DKA+ LL EME KG +T+ T+LN Y G + ER+WS+M +K + D+ +Y
Sbjct: 178 GALDKAISLLVEMEMKGNPPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKSIVPDIRSY 237
Query: 242 NVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N ++ +R K+ L+ EM+ G+KPD IS+N L+ + K E ++EAK Y
Sbjct: 238 NAKLLGL--ALVKRTKDAVLLLQEMKSKGIKPDVISFNALIKGFVKEENLEEAKYWYCET 295
Query: 299 EENG--CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+G C P+ TF T I +C G+ A+++ K+ + + D +K +VEGLVK+
Sbjct: 296 RNSGGDCGPDKFTFTTLIPFVCEKGDLRFAFELSKDVISRKCLVDMALLKCVVEGLVKES 355
Query: 357 KIKEAKGVIR 366
KI++A +++
Sbjct: 356 KIQDANELVK 365
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
+KPDT+SYN ++ YC+ +D+A + +E G P+ TF T + +G F
Sbjct: 160 IKPDTVSYNTVIKGYCEMGALDKAISLLVEMEMKGNPPDLITFNTLLNGFYSNGLFVDGE 219
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+++ + V +PD + + GL K+ K+A +++ +K K P+V+
Sbjct: 220 RIWSQMVQKSIVPDIRSYNAKLLGLALVKRTKDAVLLLQEMKSKGIKPDVI 270
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 221/387 (57%), Gaps = 7/387 (1%)
Query: 6 HIRRLCTATT--AAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
IR L +A+T + S T +S SKA S L+SE DPD+ L+I + S + R
Sbjct: 22 QIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCHI-DR 80
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESH-KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
A V LA+ K FS + L++ +N + E + + I Y QA M DH++R F
Sbjct: 81 IAFSAAVENLAEKKHFSAVSNLLDGFIENRQDLKSERFAAHAIVLYAQANMLDHSLRVFR 140
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+++ PR+V S NALLFAC ++ Y + ++ E+PK Y + PD +Y ++K C+S
Sbjct: 141 DLEKFEIPRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCES 200
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
GS+ + ++ EME KG++ + ++ +++ Y + +E ++ M+ +GV++ V+ Y
Sbjct: 201 GSASSSYSIVAEMERKGIKPNSSSFGLMISGFYSEDKNDEVGKVLVMMKDRGVNIGVSTY 260
Query: 242 NVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N+RI + + K L+D M AG+KP+T++Y+ L+ +C + +EAKK+++ +
Sbjct: 261 NIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIRGFCNEDDFEEAKKLFKVMVN 320
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
GC P++ + T IY+LC G+F+ A + KES+ + +P F+ +K LV GL K K+ E
Sbjct: 321 RGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWVPSFSIMKSLVNGLAKDSKVDE 380
Query: 361 AKGVIRTIKKKFPPNVLRAWKKVEEEL 387
AK +I +K+KF NV W +VE L
Sbjct: 381 AKELIGQVKEKFTRNV-ELWNEVEAAL 406
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 211/369 (57%), Gaps = 18/369 (4%)
Query: 13 ATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRL 72
AT + S TA+ ++ KL F I +S SK + + D TVR L
Sbjct: 892 ATKKSKKSPTATPLTDENRLQKLVQRF-------IINSESKQFRRKNDT---YDSTVRFL 941
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
A K+FS IE +IE+ K +I +E ++ LIR YG+AGMF A + FD++ EL R+V
Sbjct: 942 AVRKKFSMIEEIIEAQKKYDEIKEEGFVIRLIRLYGKAGMFSQARKLFDELPELKCERTV 1001
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
SFNALL +C +S+ +D+V +F E+P++ ++ D SY +++ ++C+ DKA+ N
Sbjct: 1002 RSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVINAYCEMDDFDKAILFFN 1061
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD 252
ME G+E VT+ T+L LY++G + E +W+ ME K + D+ +YN R+
Sbjct: 1062 HMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAPDLVSYNARLRGMVL-- 1119
Query: 253 PERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+R++ EL+ +M + +KPD YN L+T +CK+ ++EAKK Y L+E+ PNATT
Sbjct: 1120 DKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWYYKLKESEVDPNATT 1179
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+RT + LC G+FD ++ KE++ + V+ +V+GL + K +EAK + +K
Sbjct: 1180 YRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEVSKTEEAKDL---LK 1236
Query: 370 KKFPPNVLR 378
K F ++ R
Sbjct: 1237 KMFSSSLSR 1245
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 184/304 (60%), Gaps = 5/304 (1%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
D TVR LA K+FS IE +IE+ K I E + LI+ YG+AGMF HA + FD++ E
Sbjct: 1315 DSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPE 1374
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
L R+V SFN+LL +C +S+ D+V +F E+P++ ++ D ISY +++ + C+ + D
Sbjct: 1375 LNCERTVKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDALD 1434
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
KA+ ++ME G+E VT+ T+L LY++G + ER+W+ ME K + D+ +YN R+
Sbjct: 1435 KAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARL 1494
Query: 246 TNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+R++ EL+ +M + +KPD SYN L+ +C++ ++EAKK Y L+E+
Sbjct: 1495 RGMVL--EKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESE 1552
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P ATT+R + LC G+FD ++ KE++ + V+ +V+GL + K +EAK
Sbjct: 1553 VDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVDGLAEVSKTEEAK 1612
Query: 363 GVIR 366
+ R
Sbjct: 1613 DLSR 1616
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 206/375 (54%), Gaps = 33/375 (8%)
Query: 12 TATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRR 71
+AT ST A+ ++ + KL F I +S S+ + + ++ TVR
Sbjct: 1670 SATKKCNKSTAATPLTSEQGLQKLVKRF-------IKNSESEKFRRKNDTYFS---TVRL 1719
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LA K+FS IE +IE+ K +I +E + LI+ YG+AGMF HA + FD++ EL R+
Sbjct: 1720 LAIHKKFSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPELNCERT 1779
Query: 132 VISFNALLFACTRSRLY------------------DKVPILFDEIPKKYNLSPDKISYGL 173
V SFNALL +C S+ + D++ +F E+P++ ++ D +SY +
Sbjct: 1780 VKSFNALLTSCANSKEFEQLETMFREVPCANSKEFDQLETIFREVPQEVSIEADVVSYNI 1839
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ ++C G+ DKA+ N+ME G E VT+ T+L LY +G + E +W+ ME K
Sbjct: 1840 VINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKN 1899
Query: 234 VDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+ D+ +YN R+ +R++ +L+ EM + +KP+ SY L+ +C++ +++
Sbjct: 1900 IAPDLISYNARLQRMVL--EKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFCEDGDLEQ 1957
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
AK+ Y L++N +PNA+ +RT + C G+FD ++ KES + V+ +V+
Sbjct: 1958 AKQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLRLCKESFDNGLVFLAEEVQRVVD 2017
Query: 351 GLVKKKKIKEAKGVI 365
GL++ KI+EAK ++
Sbjct: 2018 GLIEVSKIEEAKDLV 2032
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLY-KQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
+E + E + K ++ + T L LY K G A +L+ E+ + + V ++N +
Sbjct: 1330 IEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFNSLLA 1389
Query: 247 NTYGG-DPERLKELIDEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ + ++++++ E+ ++ +K D ISYN ++ +C+ + +D+A + +E+NG
Sbjct: 1390 SCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDALDKAILFFHDMEKNGME 1449
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PN TF T + L G F +V+ + PD + + G+V +K+I++ +
Sbjct: 1450 PNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARLRGMVLEKRIQDGIEL 1509
Query: 365 IRTI-KKKFPPNV 376
+ + +K+ P+V
Sbjct: 1510 LAKMEEKEIKPDV 1522
>gi|21553755|gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 407
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 221/386 (57%), Gaps = 6/386 (1%)
Query: 6 HIRRLCTATT--AAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
IR L +A+T A S T +S SKA S L+SE DPD+ L+I + S + R
Sbjct: 22 QIRSLSSASTILAPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCHI-DR 80
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
A V LA+ FS + L++ + + E + + I Y QA M DH++R F
Sbjct: 81 IAFSAAVENLAEKNHFSAVSNLLDGFIENRHLKSERFAAHAIVLYAQANMLDHSLRVFRD 140
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+++ R+V S NALLFAC ++ Y + ++ E+PK Y + PD +Y ++K C+SG
Sbjct: 141 LEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESG 200
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S+ + ++ EME KG++ + ++ +++ Y + ++E ++ + M+ +GV++ V+ YN
Sbjct: 201 SASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKARGVNIGVSTYN 260
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+RI + + K L+D M AG+KP+T++Y+ L+ +C + +EAKK+++ +
Sbjct: 261 IRIQSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKVMVNR 320
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC P++ + T IY+LC G+F+ A + KES+ + +P F+ +K LV GL K K++EA
Sbjct: 321 GCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 380
Query: 362 KGVIRTIKKKFPPNVLRAWKKVEEEL 387
K +I +K+KF NV W +VE L
Sbjct: 381 KELIGQVKEKFTRNV-ELWNEVEAAL 405
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 211/377 (55%), Gaps = 13/377 (3%)
Query: 1 MTSL-RHIRRLCTATTAAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASP 58
M+SL R +R + T+ A + T A +I S + S L+ D K SS SK +
Sbjct: 1 MSSLARRLRGIFTSPLPATTKTPAKTIKRSSSNNSTLKEMIDKFKK----SSDSKRF--- 53
Query: 59 VSSRYAQ-DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
SRY + V LAK+K+ S IE ++E + +I+ E + L+ YG AGMFDHA
Sbjct: 54 -RSRYGYYEKAVLTLAKAKKLSFIEDILEHQEQYNEISTEVFAVRLMTLYGTAGMFDHAH 112
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ FD++ +L R+V+SFNALL AC S+ +DK+ F E+P + PD +SY +L+ +
Sbjct: 113 KLFDELPKLNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNA 172
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
C+ GS D AL +L+EME G+E +T+ T+LN Y+ G+ + E++W M+K V +
Sbjct: 173 FCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPN 232
Query: 238 VAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
V +YN ++ + ELIDEM+ +G+KPD + N LM +C ++EAK+ Y
Sbjct: 233 VRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYS 292
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ N P T+ T I L G+F+ A ++ KE + + ++ ++EGLVK+
Sbjct: 293 EIARNELPPVRATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKES 352
Query: 357 KIKEAKGVIRTIK-KKF 372
KI+EA ++ K KKF
Sbjct: 353 KIEEATELVELEKLKKF 369
>gi|9858776|gb|AAG01123.1|AF273333_8 BAC19.8 [Solanum lycopersicum]
Length = 167
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 130/167 (77%), Gaps = 3/167 (1%)
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
M +G DV AYNV+I N GGD E +K LI+EM DAGL PDTISY++ MTCYCKNE+M
Sbjct: 1 MVNRGCGPDVGAYNVKIMNIQGGDLEGMKTLIEEMSDAGLNPDTISYSYSMTCYCKNELM 60
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
DEA+ VYE LE+N C+ N+ TFRT I+ +C G F+ YKVFKESV V KIPDF+T+ L
Sbjct: 61 DEAEMVYEDLEKNECNANSATFRTLIF-IC--GRFETGYKVFKESVKVQKIPDFDTLTYL 117
Query: 349 VEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPAV 395
VEGLVKK K+K+AKG+ RT+KKKFPPN+++AW K+EEELGL AP +
Sbjct: 118 VEGLVKKSKLKDAKGMSRTVKKKFPPNLVKAWTKLEEELGLAEAPDI 164
>gi|5902386|gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 210/393 (53%), Gaps = 18/393 (4%)
Query: 1 MTSLRHIRRLC-----TATTAAGSSTTASSISVSK-----AKSKLRSEFDPDKALDIYSS 50
M SLRHIRR C AT A ST ++ I K A KL+SE DP+K +++ +
Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKA 60
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
+ + + +R+A + TV RLA + R IE L+E K P+ +E ++ +I YG+A
Sbjct: 61 NATNRLV-IENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKA 119
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GM A+ TF MD G RSV SFNA L + + + + P KY + D +S
Sbjct: 120 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ + +KS C+ G D A + EME G+ VTYTT+++ LYK LW+ M
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 231 KKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
KG ++ +NVRI D L L+ +++ ++PD+I+YN ++ +
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ---VEPDSITYNMVIKGFFLAR 296
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
D A++VY + G PN ++T I++LC +GNFD AY + K+ + P+ +TV+
Sbjct: 297 FPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVE 356
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRA 379
+L++GLVKK ++ +AK ++ + ++ PP RA
Sbjct: 357 MLLKGLVKKGQLDQAKSIMELVHRRVPPFSWRA 389
>gi|449479641|ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 185/303 (61%), Gaps = 5/303 (1%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
D TVR LA K+FS IE +IE+ K I E + LI+ YG+AGMF HA + FD++ E
Sbjct: 78 DSTVRLLAVRKKFSLIEDIIEAQKKYEDIKVEGFATRLIKLYGKAGMFSHARKLFDELPE 137
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
L R+V SFN+LL +C +S+ +D+V +F E+P++ ++ D ISY +++ + C+ + D
Sbjct: 138 LNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQEVSIKADVISYNIVINAFCEMDALD 197
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
KA+ ++ME G+E VT+ T+L LY++G + ER+W+ ME K + D+ +YN R+
Sbjct: 198 KAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYNARL 257
Query: 246 TNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+R++ EL+ +M + +KPD SYN L+ +C++ ++EAKK Y L+E+
Sbjct: 258 RGMVL--EKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKESE 315
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P ATT+R + LC G+FD ++ KE++ + V+ +V GL + KI+EAK
Sbjct: 316 VDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVNGLAEVSKIEEAK 375
Query: 363 GVI 365
++
Sbjct: 376 DLV 378
>gi|15220068|ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 208/388 (53%), Gaps = 18/388 (4%)
Query: 1 MTSLRHIRRLC-----TATTAAGSSTTASSISVSK-----AKSKLRSEFDPDKALDIYSS 50
M SLRHIRR C AT A ST ++ I K A KL+SE DP+K +++ +
Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKA 60
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
+ + + +R+A + TV RLA + R IE L+E K P+ +E ++ +I YG+A
Sbjct: 61 NATNRLV-IENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKA 119
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GM A+ TF MD G RSV SFNA L + + + + P KY + D +S
Sbjct: 120 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ + +KS C+ G D A + EME G+ VTYTT+++ LYK LW+ M
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 231 KKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
KG ++ +NVRI D L L+ +++ ++PD+I+YN ++ +
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ---VEPDSITYNMVIKGFFLAR 296
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
D A++VY + G PN ++T I++LC +GNFD AY + K+ + P+ +TV+
Sbjct: 297 FPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVE 356
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+L++GLVKK ++ +AK ++ + ++ PP
Sbjct: 357 MLLKGLVKKGQLDQAKSIMELVHRRVPP 384
>gi|242082341|ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 194/344 (56%), Gaps = 6/344 (1%)
Query: 34 KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
K++ E DP++ ++ + + H V +R+A + V RLA ++R +E ++E HK P+
Sbjct: 105 KIKHERDPERLYQLFRT-NAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKALPQ 163
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+E ++ +I YG+AGM HA+RTF +M G PR+ S NA + R++++D+
Sbjct: 164 GRREGFVVRIIGLYGKAGMPSHALRTFQEMGMYGCPRTAKSLNATMKVLLRAQMFDEALW 223
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E P+KY + D IS ++K +CD G A ++ ME GV+ VTYTT++
Sbjct: 224 LFEEGPEKYGVELDDISCNTVVKIYCDMGDLRAAYRVMQGMEGAGVQPDVVTYTTLMAAF 283
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER---LKELIDEMRDAGLKP 270
YK G E + LW+ M +G + +A YNVRI + ER EL+ +M G+KP
Sbjct: 284 YKCGQREVGDGLWNLMRLRGCEPTLATYNVRIQFLI--NRERGWQANELVRKMYAVGIKP 341
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D I+YN ++ + + AK V+ + GC PN+ ++T +++LC +FD A++
Sbjct: 342 DEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRFC 401
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
K+S+ + P NT+ L++GL+ K + A+ +++ + + PP
Sbjct: 402 KDSMEKNWFPSVNTINQLLKGLMAISKDRNAREIMKLVTGRKPP 445
>gi|359482337|ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 205/390 (52%), Gaps = 20/390 (5%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSK--------------AKSKLRSEFDPDKALD 46
M SLR IRR C A + A +++ +K A KL++E DP++
Sbjct: 1 MLSLRPIRRFCHAAAITAIAPVAETVTSAKSNCIKKPDKPLEEPALVKLKAERDPERLFQ 60
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
++ + + H V +R+A + TV RLA + RF IE L+E K P+ +E ++ +I
Sbjct: 61 LFKA-NAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREGFIVRIIML 119
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
YG+AGM A+ TF M G R+V SFNA L T+S + + + ++P K+ +
Sbjct: 120 YGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVPFKFGIEL 179
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D S +++K+ CD +KA ++ EME GV VTYTT+++ YK E LW
Sbjct: 180 DVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEVGNGLW 239
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYC 283
+ M KG ++A +NVRI Y + R + L+ M G+ PD ++YN ++ +C
Sbjct: 240 NLMVMKGCLPNLATFNVRI--QYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKGFC 297
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ ++ AKKVY L G PN ++T I++LC G FD AY + K+ + + + +
Sbjct: 298 QAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGEFDMAYTMCKDCMNRNWSLNVD 357
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T+ L+EGL +I +AK ++R +K+ P
Sbjct: 358 TIYKLLEGLKGNGEIDKAKVILRLARKRVP 387
>gi|26453140|dbj|BAC43646.1| unknown protein [Arabidopsis thaliana]
gi|28950987|gb|AAO63417.1| At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 208/388 (53%), Gaps = 18/388 (4%)
Query: 1 MTSLRHIRRLC-----TATTAAGSSTTASSISVSK-----AKSKLRSEFDPDKALDIYSS 50
M SLRHIRR C AT A ST ++ I K A KL+SE DP+K +++ +
Sbjct: 1 MLSLRHIRRFCHFPSSAATGIAYVSTESNQIQGLKPLEEPALVKLKSERDPEKLYNLFKA 60
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
+ + + +R+A + TV RLA + R IE L+E K P+ +E ++ +I YG+A
Sbjct: 61 NATNRLV-IENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFMVRIIMLYGKA 119
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GM A+ TF MD G RSV SFNA L + + + + P KY + D +S
Sbjct: 120 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ + +KS C+ G D A + EME G+ VTYTT+++ LYK LW+ +
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLIV 239
Query: 231 KKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
KG ++ +NVRI D L L+ +++ ++PD+I+YN ++ +
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ---VEPDSITYNMVIKGFFLAR 296
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
D A++VY + G PN ++T I++LC +GNFD AY + K+ + P+ +TV+
Sbjct: 297 FPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVE 356
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+L++GLVKK ++ +AK ++ + ++ PP
Sbjct: 357 MLLKGLVKKGQLDQAKSIMELVHRRVPP 384
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 188/327 (57%), Gaps = 7/327 (2%)
Query: 49 SSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
SS SK + SRY + V LAK+K+FS IE ++E K +I+ E + L+ Y
Sbjct: 8 SSDSKRF----RSRYGYYEKAVLTLAKAKKFSFIEDILEHQKQYNEISTEVFAVRLMTLY 63
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
G+AGMF+HA + FD+ +L R+V+SFNALL C S+ +DK+ F E+P + PD
Sbjct: 64 GKAGMFEHAHKLFDEXPKLNCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPD 123
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+SY +++ + C+ GS D AL +L+EME G+E +T+ T+LN Y+ G+ + E++W
Sbjct: 124 VVSYNIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWD 183
Query: 228 EMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
M+K V +V +YN ++ + ELIDEM+ +G+KPD + N LM +C
Sbjct: 184 LMKKNNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAG 243
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
++EAK+ Y + N P T+ T I L G+FD A ++ KE + + ++
Sbjct: 244 NLEEAKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQ 303
Query: 347 LLVEGLVKKKKIKEAKGVIRTIK-KKF 372
++EGLVK+ KI+EA ++ K KKF
Sbjct: 304 QVLEGLVKESKIEEATELVELAKLKKF 330
>gi|255553141|ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543245|gb|EEF44777.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 400
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 210/385 (54%), Gaps = 12/385 (3%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSK----------AKSKLRSEFDPDKALDIYSS 50
M SLR IRR C + AA SST + + ++ A +KL++E DP+K +++ +
Sbjct: 1 MLSLRPIRRFCYSAAAAISSTDSPAAVSNRVLNQKPLEEPALAKLKAERDPEKLFNLFKA 60
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
+++ + +R+A + T+ RLA ++RF IE L+E K P+ +E ++ +I YG+A
Sbjct: 61 NARNRLV-IENRFAFEDTISRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKA 119
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GM HA+ TF+ M G R+V SFNA L T + + + E+P+K+++ D S
Sbjct: 120 GMTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKFDIILDIFS 179
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+++K+ C DKA ++ +ME G+ VTYTT+++ YK E + LW+ M
Sbjct: 180 VNIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEISNGLWNLMV 239
Query: 231 KKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG +++ +NVRI + + E++ M G+ PD ++YN ++ + + ++
Sbjct: 240 LKGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKGFGQAGYLE 299
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
A++VY L G PN ++T I+ LC G FD AY + K+ + + +T+ L+
Sbjct: 300 MARRVYSALHGKGYKPNVKIYQTMIHCLCKGGEFDLAYTMCKDCMKKSWFLNVDTIHTLL 359
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPP 374
+GL K ++ +AK ++ +++ PP
Sbjct: 360 DGLKKNGQLDKAKMIVTLAQRRMPP 384
>gi|293334061|ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 191/341 (56%), Gaps = 2/341 (0%)
Query: 34 KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
+++ E DP++ ++ + + H V +R+A + V RLA ++R +E ++E HK P+
Sbjct: 99 RIKHERDPERLYQLFRA-NAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKALPQ 157
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+E ++ +I YG+AGM HA+RTF +M G PR+ S NA + R+R++D+
Sbjct: 158 GRREGFVVRIIGLYGKAGMPGHALRTFQEMGMYGCPRTAKSLNATMKVLLRARMFDEALS 217
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E P+KY++ D IS ++K CD G A +++ ME GV +TYTT++
Sbjct: 218 LFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYQVMQGMERAGVRPDVITYTTLMAAF 277
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
YK G E + LW+ M +G +A YNVRI G + EL +M AG+KPD
Sbjct: 278 YKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANELARKMYVAGIKPDE 337
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
I+YN ++ + + AK V+ + GC PN+ ++T +++LC +FD A+++ K+
Sbjct: 338 ITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRLCKD 397
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
S+ + P +T+ L++GL+ K + K +++ + + P
Sbjct: 398 SMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKP 438
>gi|15222796|ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14 [Arabidopsis thaliana]
gi|18650654|gb|AAL75896.1| At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis thaliana]
gi|332195194|gb|AEE33315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 213/372 (57%), Gaps = 15/372 (4%)
Query: 7 IRRLCTATTAAGSSTTASSISVSKAKSKLRS----EFDPDKALDIYSSV--SKHYASPVS 60
IRR +A T S TA + ++S + L S E +P + ++ + S+ + + ++
Sbjct: 17 IRRFSSAATVV-SEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKACESERFRTNIA 75
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
D TVRRL +KR +E ++E K +++E + +I YG+AGMF++A + F
Sbjct: 76 ---VYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 132
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
++M RSV+SFNALL A S+ +D V LF+E+P K ++ PD +SY L+K+ C+
Sbjct: 133 EEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCE 192
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
S +A+ LL+E+ENKG++ VT+ T+L Y +G E E +W++M +K V +D+
Sbjct: 193 KDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRT 252
Query: 241 YNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN R+ + + KEL++ E++ +GLKPD S+N ++ MDEA+ Y+
Sbjct: 253 YNARLLGL--ANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKE 310
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ ++G P+ TF + +C +G+F+ A ++FKE+ + T++ LV+ LVK K
Sbjct: 311 IVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSK 370
Query: 358 IKEAKGVIRTIK 369
+EA+ +++ K
Sbjct: 371 REEAEEIVKIAK 382
>gi|224070831|ref|XP_002303255.1| predicted protein [Populus trichocarpa]
gi|222840687|gb|EEE78234.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 207/388 (53%), Gaps = 17/388 (4%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSIS-----------VSKAKSKLRSEFDPDKALDIYS 49
M SLR+ RR C + S + +++S A KL++E DP+K +++
Sbjct: 1 MLSLRNTRRFCNFAASVALSRSPAAVSNRIQNQNQKPLEEPALVKLKAERDPEKLFNLFK 60
Query: 50 SVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQ 109
+ +++ V +R+A + TV RLA + RF IE L+E K P+ +E ++ +I YG+
Sbjct: 61 ANAENRLV-VENRFAFEDTVSRLAGANRFDYIEHLLEHQKPLPQGRREGFMVRIIMLYGK 119
Query: 110 AGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI 169
AGM HA+ TF M G R+V S NA L T +R + +E PKK+++ D
Sbjct: 120 AGMIKHAIDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAIEAFVNEAPKKFDIELDIF 179
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
S +++K+ C++G+ DKA L+ EME GV +TYTT+++ YK +E LW+ M
Sbjct: 180 SVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNNRSEIGNGLWNLM 239
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR---DAGLKPDTISYNFLMTCYCKNE 286
KG ++A +NVRI Y + R D MR G+ PD ++YN ++ + +
Sbjct: 240 VLKGCLPNLATFNVRI--QYLVNIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKGFFQTG 297
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
++ AK VY L G N ++T +++LC G FD AY + ++ + + + +T+
Sbjct: 298 KLEMAKMVYFSLRGKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRNNWFLNVDTIH 357
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
L+EGL K ++ +AK ++ +K+ PP
Sbjct: 358 TLLEGLKKNGQLNKAKVIVTLAQKRVPP 385
>gi|297842851|ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335148|gb|EFH65566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 397
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 204/388 (52%), Gaps = 18/388 (4%)
Query: 1 MTSLRHIRRLC-----TATTAAGSSTTASSISVSK-----AKSKLRSEFDPDKALDIYSS 50
M SLR IRR C AT A ST ++ I K A KL+SE DP+K ++ +
Sbjct: 1 MLSLRLIRRFCHFSSSAATGIAYVSTDSNQIQGLKPLEEPALVKLKSERDPEKLFKLFQA 60
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
+ + + +R+A + TV RLA + R IE L+E K P+ +E ++ +I YG+A
Sbjct: 61 NATNRLV-IENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKA 119
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GM A+ TF MD G RSV SFNA L + + + P KY + D +S
Sbjct: 120 GMTKQALDTFYNMDLYGCKRSVKSFNAALQVLSFKPDLHTIREFLHDAPAKYRIDIDAVS 179
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ + +KS C+ G D A + EME G++ VTYTT+++ YK LW+ M
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLKPDVVTYTTLISAFYKHERCVIGNGLWNLMV 239
Query: 231 KKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
KG ++ +NVRI D L L+ +++ ++PD+I+YN ++ +
Sbjct: 240 LKGCRPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ---VEPDSITYNMVIKGFFLAR 296
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
A++VY + G PN ++T I++LC +GNFD AY + K+ + P+ +TV+
Sbjct: 297 FPHMAERVYTAMHGKGYKPNVKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVE 356
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+L++GLVKK ++ +AK ++ + K+ PP
Sbjct: 357 MLLKGLVKKDQLDQAKSIMGLVHKRVPP 384
>gi|21617993|gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 202/369 (54%), Gaps = 17/369 (4%)
Query: 8 RRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ-- 65
RR +A TAA ++ + S+ + + E DP +++ + + + +
Sbjct: 21 RRFFSAVTAAAATPSPPKPSLI---TLVNDERDP-------KFITEKFKKACQAEWFRKN 70
Query: 66 ----DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
+ TVRRLA +K+F +E ++E P +++E ++ +I YG+ GMF++A + FD
Sbjct: 71 IAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFD 130
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M E R+V+SFNALL AC S+ +D V +F+E+P K ++ PD SY L+K C
Sbjct: 131 EMPERNCKRTVLSFNALLNACVNSKKFDLVEGIFEELPGKLSIEPDVASYNTLIKGLCGK 190
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
GS +A+ L++E+ENKG++ +T+ +L+ Y +G EE E++W+ M +K V D+ +Y
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N R+ E + L D+++ LKPD ++ ++ + +DEA Y+ +E+
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NGC P F + + +C +G+ + AY++ KE + D ++ +V+ LVK K E
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDE 370
Query: 361 AKGVIRTIK 369
A+ ++ K
Sbjct: 371 AEEIVELAK 379
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 137/319 (42%), Gaps = 26/319 (8%)
Query: 55 YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFD 114
+++P + R+ +T S + TL+ + DPK E + + QA F
Sbjct: 15 FSTPTNRRFFSAVTAAAATPSPPKPSLITLVNDER-DPKFITEKF-----KKACQAEWFR 68
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
+ ++ R+V A ++ ++ V + +E K N+S + +
Sbjct: 69 KNIAVYE--------RTVRRLAA-------AKKFEWVEEILEEQNKYPNMSKEGF-VARI 112
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK-G 233
+ + G + A ++ +EM + + T +++ +LN + E ++ E+ K
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVEGIFEELPGKLS 172
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM-TCYCKNEMMDEA 291
++ DVA+YN I G G LIDE+ + GLKPD I++N L+ Y K + +E
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK-FEEG 231
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++++ + E + ++ + L ++ +F + PD T +++G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 352 LVKKKKIKEAKGVIRTIKK 370
V + K+ EA + I+K
Sbjct: 292 FVSEGKLDEAITWYKEIEK 310
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 200/369 (54%), Gaps = 14/369 (3%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVS 60
M+SL R T S+ T +V+ + KL+ K + Y S+
Sbjct: 1 MSSLYRRLRTIFNTPKTTSTATIPPSTVNTKERKLQ------KLVQRYKRSSESPEFRAR 54
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
R+ + VRRL+ +K+FS +E +E KN IT E + LI YG+AGM DHA R F
Sbjct: 55 HRFYSTI-VRRLSFAKQFSMVEDFLEHQKNFADITNEQFTIRLISLYGKAGMLDHAHRLF 113
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D+M +L R+V SFNALL AC S +DKV + P K ++PD +S+ +++K +C+
Sbjct: 114 DEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCE 173
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G+ D + +L EME +G+E +T+ T+LN Y G + E++W+ ME K V +V +
Sbjct: 174 IGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRS 233
Query: 241 YNVRITNTYGGDPE----RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
YN R+ G + E EL+ EM + G++PD +SYN ++ C +E ++E K Y
Sbjct: 234 YNSRLR---GLELENRVMEAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYR 290
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
L+ENG P+ T+ T I +L G+ D A ++ E + + + + +V+ LVK
Sbjct: 291 KLKENGRMPDRVTYMTLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVVDELVKLS 350
Query: 357 KIKEAKGVI 365
+++EAK ++
Sbjct: 351 RVEEAKDLV 359
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 193 EMENKGVEVTTVTYTTVLNCLY-KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
E + ++T +T L LY K G + A RL+ EM V ++N ++
Sbjct: 79 EHQKNFADITNEQFTIRLISLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNALLSACI-- 136
Query: 252 DPERLKELIDEMRD----AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
D + ++ +RD G+ PD +S+N ++ YC+ +D V +E+ G P+
Sbjct: 137 DSGKFDKVQGFLRDFPVKLGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDL 196
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TF T + G+G F K++ + +P+ + + GL + ++ EA ++
Sbjct: 197 ITFNTLLNGFYGNGRFVDGEKIWTLMESKNVVPNVRSYNSRLRGLELENRVMEAVELLGE 256
Query: 368 IKKK-FPPNVL 377
++ K P+V+
Sbjct: 257 MENKGIRPDVM 267
>gi|297834132|ref|XP_002884948.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
gi|297330788|gb|EFH61207.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 202/364 (55%), Gaps = 7/364 (1%)
Query: 8 RRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSK-HYASPVSSRYAQD 66
RR +A TAA ++ ++ S+ + + E DP ++ + + + + Y +
Sbjct: 21 RRFFSAVTAAAATPSSPRPSLI---TLVNDERDPKFIMEKFKKACQAEWFRKNIAVYEK- 76
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
TVRRLA +K+F +E ++E P +++E ++ +I YG+ GMF++A + FD+M E
Sbjct: 77 -TVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPER 135
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
R+V+SFNALL AC S+ +D V +F E+P K ++ PD SY L+K C GS +
Sbjct: 136 NCKRTVLSFNALLNACVNSKKFDLVESIFKELPGKISIEPDVASYNTLIKGLCGKGSFTE 195
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ L++E+ENKG++ +T+ +L+ Y +G EE E++W+ M +K V D+ +YN R+
Sbjct: 196 AVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEKIWARMVEKKVKRDIRSYNARLL 255
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E + L DE++ LKPD ++ ++ + +DEA Y+ +E+NGC P
Sbjct: 256 GLAMEKKSEEMVSLFDELKVNELKPDVFTFTAMIKGFAGEGRLDEAITWYKEIEKNGCRP 315
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
F + + +C + + + AY++ KE + + D ++ +V+ LVK K EA+ ++
Sbjct: 316 MKFVFNSLLPAICKACDLESAYELCKEIFVKRLLVDEAVLQEVVDTLVKGSKQDEAEEIV 375
Query: 366 RTIK 369
K
Sbjct: 376 ELAK 379
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 156 DEIPKKYNLSPDKISYGL---LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+EI ++ N P+ G ++ + G + A ++ +EM + + T +++ +LN
Sbjct: 91 EEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTVLSFNALLNA 150
Query: 213 LYKQGNAEEAERLWSEMEKK-GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
+ E ++ E+ K ++ DVA+YN I G G LIDE+ + GLKP
Sbjct: 151 CVNSKKFDLVESIFKELPGKISIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKP 210
Query: 271 DTISYNFLM-TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
D I++N L+ Y K + +E +K++ + E + ++ + L ++ +
Sbjct: 211 DHITFNILLHESYTKGK-FEEGEKIWARMVEKKVKRDIRSYNARLLGLAMEKKSEEMVSL 269
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
F E + PD T +++G + ++ EA + I+K
Sbjct: 270 FDELKVNELKPDVFTFTAMIKGFAGEGRLDEAITWYKEIEK 310
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 228 EMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
E + K ++ + RI N YG G E +++ DEM + K +S+N L+ +
Sbjct: 95 EEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTVLSFNALLNACVNS 154
Query: 286 EMMDEAKKVYEGLE-ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ D + +++ L + P+ ++ T I LCG G+F +A + E PD T
Sbjct: 155 KKFDLVESIFKELPGKISIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHIT 214
Query: 345 VKLLVEGLVKKKKIKEAKGV-IRTIKKK 371
+L+ K K +E + + R ++KK
Sbjct: 215 FNILLHESYTKGKFEEGEKIWARMVEKK 242
>gi|297847954|ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337700|gb|EFH68117.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 395
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 203/358 (56%), Gaps = 14/358 (3%)
Query: 7 IRRLCTATTAAGSSTTASSISVSKAKSKLRS----EFDPDKALDIYSSV--SKHYASPVS 60
IRR +A T TTA S ++S ++ L S E +P + ++ + S+ + + ++
Sbjct: 17 IRRFSSAATV----TTAVSAAISPPQNSLTSIVNGERNPQRIVEKFKKACESERFRNNIA 72
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
D TVRRL +KR +E ++E K +++E + +I YG+AGMF++A + F
Sbjct: 73 ---VYDRTVRRLVAAKRLHFVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 129
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D+M + RSV+SFNALL A S+ +D V LF+E+P K ++ PD +SY L+K+ C+
Sbjct: 130 DEMPDRNCKRSVLSFNALLSAYGLSKKFDVVEQLFNELPGKLSIKPDIVSYNTLIKALCE 189
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
S +A+ LL+E ENKG++ VT+ T+L Y +G E E +W+++ +K V +D+
Sbjct: 190 KDSLPEAVALLDEFENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKLVEKNVPIDIRT 249
Query: 241 YNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YN R+ + L L +E++ +G+KPD S+N ++ MDEA+ Y+ +
Sbjct: 250 YNARLLGLASEVKSKELVSLFEELKASGIKPDVFSFNAMIRGSINQGKMDEAESWYKEIV 309
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
++G P+ TF + +C +G+F+ A ++FKE+ + T++ LV+ LVK K
Sbjct: 310 KHGYRPDKATFALLLPAMCKAGDFEFAIELFKETFSKRYLVGQTTLQQLVDELVKGSK 367
>gi|115477108|ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|125562056|gb|EAZ07504.1| hypothetical protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 443
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 200/361 (55%), Gaps = 11/361 (3%)
Query: 20 STTASSISVSKAKS----KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
STT S V A+ ++++E DP + +++ + + H + +R+A + V RLA +
Sbjct: 66 STTKESAGVEPAEPPVLVRIKNERDPVRLYELFRA-NAHNRLLIENRFAFEDAVARLAGA 124
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+R +E ++E HK P+ +E ++ +I YG+A M DHA+ TF +M G PR+ S
Sbjct: 125 RRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPDHALSTFREMGLYGCPRTAKSL 184
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
NA + R+RL+D+V LF E + Y + D ISY ++K CD G A ++ EME
Sbjct: 185 NATMKVLLRARLFDEVLQLF-ESSETYGVELDDISYNTVVKMMCDLGELRAAFRVMQEME 243
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI---TNTYGGD 252
GV +TYTT+++ YK G E + LW+ M +G +A+YNVRI N G
Sbjct: 244 KAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLVNRRRG- 302
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ +L+ +M +GL+PD I+YN ++ + + AK V+ + GC PNA ++T
Sbjct: 303 -WQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCKPNAKVYQT 361
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
+++LC FD A+++ K+S+ + P +T+ L++GL+ K + A+ +++ + +
Sbjct: 362 MVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLVIGRK 421
Query: 373 P 373
P
Sbjct: 422 P 422
>gi|18399887|ref|NP_566445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273726|sp|Q9LK57.1|PP226_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g13160, mitochondrial; Flags: Precursor
gi|10172603|dbj|BAB01407.1| unnamed protein product [Arabidopsis thaliana]
gi|22531265|gb|AAM97136.1| expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein [Arabidopsis thaliana]
gi|332641782|gb|AEE75303.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 394
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 175/303 (57%), Gaps = 1/303 (0%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TVRRLA +K+F +E ++E P +++E ++ +I YG+ GMF++A + FD+M E
Sbjct: 77 TVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERN 136
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
R+ +SFNALL AC S+ +D V +F E+P K ++ PD SY L+K C GS +A
Sbjct: 137 CKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEA 196
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L++E+ENKG++ +T+ +L+ Y +G EE E++W+ M +K V D+ +YN R+
Sbjct: 197 VALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLG 256
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
E + L D+++ LKPD ++ ++ + +DEA Y+ +E+NGC P
Sbjct: 257 LAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPL 316
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
F + + +C +G+ + AY++ KE + D ++ +V+ LVK K EA+ ++
Sbjct: 317 KFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Query: 367 TIK 369
K
Sbjct: 377 LAK 379
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 156 DEIPKKYNLSPDKISYGL---LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+EI ++ N P+ G ++ + G + A ++ +EM + + T +++ +LN
Sbjct: 91 EEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA 150
Query: 213 LYKQGNAEEAERLWSEMEKK-GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
+ E ++ E+ K ++ DVA+YN I G G LIDE+ + GLKP
Sbjct: 151 CVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKP 210
Query: 271 DTISYNFLM-TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
D I++N L+ Y K + +E ++++ + E + ++ + L ++ +
Sbjct: 211 DHITFNILLHESYTKGK-FEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSL 269
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
F + PD T +++G V + K+ EA + I+K
Sbjct: 270 FDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
>gi|125603901|gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 200/361 (55%), Gaps = 11/361 (3%)
Query: 20 STTASSISVSKAKS----KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
STT S V A+ ++++E DP + +++ + + H + +R+A + V RLA +
Sbjct: 138 STTKESAGVEPAEPPVLVRIKNERDPVRLYELFRA-NAHNRLLIENRFAFEDAVARLAGA 196
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+R +E ++E HK P+ +E ++ +I YG+A M DHA+ TF +M G PR+ S
Sbjct: 197 RRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPDHALSTFREMGLYGCPRTAKSL 256
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
NA + R+RL+D+V LF E + Y + D ISY ++K CD G A ++ EME
Sbjct: 257 NATMKVLLRARLFDEVLQLF-ESSETYGVELDDISYNTVVKMMCDLGELRAAFRVMQEME 315
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI---TNTYGGD 252
GV +TYTT+++ YK G E + LW+ M +G +A+YNVRI N G
Sbjct: 316 KAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVRIQFLVNRRRG- 374
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ +L+ +M +GL+PD I+YN ++ + + AK V+ + GC PNA ++T
Sbjct: 375 -WQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGCKPNAKVYQT 433
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
+++LC FD A+++ K+S+ + P +T+ L++GL+ K + A+ +++ + +
Sbjct: 434 MVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNAREIMKLVIGRK 493
Query: 373 P 373
P
Sbjct: 494 P 494
>gi|224054128|ref|XP_002298105.1| predicted protein [Populus trichocarpa]
gi|222845363|gb|EEE82910.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 204/390 (52%), Gaps = 21/390 (5%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSK-------------AKSKLRSEFDPDKALDI 47
M SLR RR AA T S +VS A KL++E DP+K ++
Sbjct: 1 MLSLRVTRRF--RNFAAAVLLTHSPAAVSNLIQNQNQKPLEEPALLKLKAERDPEKLFNL 58
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+ + +++ V +R+A + TV RLA + RF IE L+E K P+ +E Y+ +I Y
Sbjct: 59 FKANAEN-KLVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKTLPQGRREGYMVRIIMLY 117
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
G+AGM +HA+ TF M G R+V SFNA L T +R + +E PKK+++ D
Sbjct: 118 GKAGMIEHAIDTFHNMHLRGCKRTVKSFNAALKVLTGTRDLATIETFVNEAPKKFDIEFD 177
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
S +++K+ C+ G DK+ L+ EME GV +TYTT+ + YK AE LW+
Sbjct: 178 IFSVNIIVKALCERGVLDKSYLLMVEMEKSGVTPDVITYTTLTSAYYKNNKAEIGNGLWN 237
Query: 228 EMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR---DAGLKPDTISYNFLMTCYCK 284
M KG ++A +NVRI Y + R D MR G+ PD +SYN ++ + +
Sbjct: 238 LMVLKGCLPNLATFNVRI--QYLVNIRRAWHANDVMRLMQKIGIVPDEVSYNLVLKGFFQ 295
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++ AK VY L G N ++T +++LC G FD AY + ++ + + + +T
Sbjct: 296 VGNLEMAKLVYFSLRCKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRTNWFLNVDT 355
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+ L+EGL K ++ +AK ++ +++ PP
Sbjct: 356 IHTLLEGLKKNGQLNKAKVILTLAQRRVPP 385
>gi|317106734|dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
Length = 399
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 204/386 (52%), Gaps = 15/386 (3%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSIS---------VSKAKSKLRSEFDPDKALDIYSSV 51
M SLR RR C + A S+ + + +S A KL++E DP+K +++ +
Sbjct: 1 MLSLRLTRRFCHSAAAIASTDSPAVVSNYSLNNRPLEEPALIKLKAERDPEKLFNLFKAN 60
Query: 52 SKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAG 111
+++ + +R+A + TV RLA ++RF IE L+E K P+ +E ++ +I Y +AG
Sbjct: 61 AQNRLV-IENRFAFEDTVSRLAGARRFHYIENLLEHQKTLPQGRREGFIVRIIMLYAKAG 119
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
M HA+ TF M G R+V SFNA L T +R + E P+K++++ D S
Sbjct: 120 MVKHALNTFYDMHLYGCKRTVKSFNAALKVLTGTRNMVAIQDFLCEAPEKFDITMDIFSI 179
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+++K+ C+ G DKA ++ + + G+E +TYTT+++ Y+ LW+ M
Sbjct: 180 NIIIKALCEMGYLDKAYLVMVQFQKSGIEADVITYTTLISASYRNKLWMIGNGLWNLMVL 239
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKELIDEMR---DAGLKPDTISYNFLMTCYCKNEMM 288
KG ++A +NVRI Y + + E D MR G+ PD ++YN ++ +C +
Sbjct: 240 KGCKPNLATFNVRI--QYLVNSRQSWEANDVMRLMQRIGIAPDQVTYNLVIKGFCLAGYL 297
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+ AK+VY L+ PN ++T I++LC G FD AY + K+ + +T+ L
Sbjct: 298 EMAKRVYSALQGEVYKPNFKIYQTMIHYLCKGGEFDLAYTMCKDCMGKGWYLHVDTIHAL 357
Query: 349 VEGLVKKKKIKEAKGVIRTIKKKFPP 374
+ GL+K + +AK ++ K+K PP
Sbjct: 358 LNGLMKNGHLGKAKLIVTLAKRKVPP 383
>gi|449479644|ref|XP_004155662.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 205/375 (54%), Gaps = 34/375 (9%)
Query: 12 TATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRR 71
+AT ST A+ ++ + KL F I +S S+ + + ++ TVR
Sbjct: 33 SATKKCNKSTAATPLTSEQGLQKLVKRF-------IKNSESEKFRRKNDTYFS---TVRL 82
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LA K+FS IE +IE+ K +I +E + LI+ YG+AGMF HA + FD++ EL R+
Sbjct: 83 LAIHKKFSMIEDIIEAQKKYEEIKEEGFAIRLIKLYGKAGMFSHARKLFDELPELNCERT 142
Query: 132 VISFNALL------------------FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
V SFNALL C S+ +D++ +F E+P++ ++ D +SY +
Sbjct: 143 VKSFNALLTSCANSKEFEQLETMFREIPCANSKEFDQLETIFREVPQEVSIEADVVSYNI 202
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ ++C G+ DKA+ N+ME G E VT+ T+L LY +G + E +W+ ME K
Sbjct: 203 VINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKN 262
Query: 234 VDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+ D+ +YN R+ +R++ +L+ EM A +KP+ SY L+ +C++ +++
Sbjct: 263 IAPDLISYNARLQRMVL--EKRIQDGIQLLAEMEKA-IKPNVDSYYILIEGFCEDGDLEQ 319
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
AK+ Y L++N +PNA+ +RT + C G+FD ++ KES + V+ +V+
Sbjct: 320 AKQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLQLCKESFDNGLVFLAEEVQRVVD 379
Query: 351 GLVKKKKIKEAKGVI 365
GL++ KI+EAK ++
Sbjct: 380 GLIEVSKIEEAKDLV 394
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 17/204 (8%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+K + +G A +L +E+ E T ++ +L E+ E ++ E
Sbjct: 114 LIKLYGKAGMFSHARKLFDELPELNCERTVKSFNALLTSCANSKEFEQLETMFRE----- 168
Query: 234 VDLDVAAYNVRITNTYGGDPERLKELIDEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
I + ++L+ + E+ ++ ++ D +SYN ++ YCK +D+A
Sbjct: 169 -----------IPCANSKEFDQLETIFREVPQEVSIEADVVSYNIVINAYCKMGALDKAI 217
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ +E+NG PN TF T + L G F ++ + PD + ++ +
Sbjct: 218 LFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKNIAPDLISYNARLQRM 277
Query: 353 VKKKKIKEAKGVIRTIKKKFPPNV 376
V +K+I++ ++ ++K PNV
Sbjct: 278 VLEKRIQDGIQLLAEMEKAIKPNV 301
>gi|357148282|ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 207/382 (54%), Gaps = 9/382 (2%)
Query: 8 RRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDL 67
RR A + S+ S + +++ E DP + +++ + + H V +R+A
Sbjct: 62 RRRAPNDAPAAAEDKGSTDSETPLLVRIKHERDPKRLYELFRA-NAHNRLLVENRFAFQD 120
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V RL+ ++R +E ++E HK P+ +E ++ +I YG+A M +HA+RTF +M+ G
Sbjct: 121 AVARLSGARRNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPEHALRTFQEMEMYG 180
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ SFNA L +++L+D+ LF+E P KY + D ISY ++K CD G A
Sbjct: 181 CTCTNKSFNATLKVLMQAQLFDEALQLFEEGPGKYGVELDDISYNTVVKMMCDMGELRAA 240
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-- 245
++ EME +G++ +TYTT++ YK G E + LW+ M +G +A+YNVRI
Sbjct: 241 YRVMQEMEKEGIQPDVITYTTLMAAFYKNGQREVGDGLWNLMRLRGCMPTLASYNVRIQF 300
Query: 246 -TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
N G + +L+ +M AG++PD I+YN ++ + + AK V+ + GC
Sbjct: 301 LINRRRG--WQANDLVRKMYAAGIRPDEITYNLVIKGFFMMREHEMAKTVFGAMHGRGCK 358
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PN ++T +++LC FD A+++ K+S+ + P +T+ L++GL+ K + A +
Sbjct: 359 PNGKIYQTMVHYLCERREFDLAFRLCKDSMENNWFPSVDTIHHLLKGLMSISKDRNAGEI 418
Query: 365 IRTI---KKKFPPNVLRAWKKV 383
++ + K + + +RA++ +
Sbjct: 419 MKLVMGRKSSYSGDEVRAFQDI 440
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 176/309 (56%), Gaps = 10/309 (3%)
Query: 28 VSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDIETLIE 86
+S A + LR D A SS SK + SRY + V LAK+K+FS IE ++E
Sbjct: 139 ISSAATILRVXDDLGSAXFKKSSDSKRF----RSRYGYYEKAVLTLAKAKKFSFIEDILE 194
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
K +I+ E + LI YG+AGMF+HA + FD+M +L R+V+SFNALL AC S+
Sbjct: 195 HQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERTVMSFNALLSACVNSK 254
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+DK+ F E+P+ + PD +SY +L+ + C+ GS D AL +L+EME G+E +T+
Sbjct: 255 KFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITF 314
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEM 263
T+LN Y+ G+ + E++W M+K V +V +YN ++ + R+ E LIDEM
Sbjct: 315 NTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISEN--RMSEAVNLIDEM 372
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+ +G+KPD + N LM +C ++EAK+ + + N P T+ I L +F
Sbjct: 373 KTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWHSEIAINELPPVRATYMRLIPFLVEKDDF 432
Query: 324 DKAYKVFKE 332
+ A ++ KE
Sbjct: 433 EMATELCKE 441
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E K+YN ++ L+ + +G + A +L +EM E T +++ +L+
Sbjct: 194 EHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERTVMSFNALLSACVNS 253
Query: 217 GNAEEAERLWSEMEKK-GVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTI 273
++ + + E+ + G+ DV +YN+ + N + G + ++DEM GL+PD I
Sbjct: 254 KKFDKIDGFFQELPRNLGIVPDVVSYNI-LVNAFCEMGSLDSALSVLDEMEKVGLEPDLI 312
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
++N L+ + ++ + +K+++ +++N +PN ++ + + +A + E
Sbjct: 313 TFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEM 372
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
PD T+ L++G ++EAK
Sbjct: 373 KTSGIKPDVFTLNSLMKGFCNAGNLEEAK 401
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
Query: 200 EVTTVTYTTVLNCLY-KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLK 257
E++T + L LY K G E A +L+ EM K + V ++N ++ +++
Sbjct: 201 EISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERTVMSFNALLSACVNSKKFDKID 260
Query: 258 ELIDEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
E+ R+ G+ PD +SYN L+ +C+ +D A V + +E+ G P+ TF T +
Sbjct: 261 GFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNV 320
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
SG+ K++ + P+ + + G++ + ++ EA +I +K
Sbjct: 321 FYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLRGVISENRMSEAVNLIDEMK 373
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 228 EMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
E +K+ ++ + VR+ YG G E +L DEM + +S+N L++ +
Sbjct: 194 EHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEMPKLNCERTVMSFNALLSACVNS 253
Query: 286 EMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ D+ ++ L N G P+ ++ + C G+ D A V E V PD T
Sbjct: 254 KKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDSALSVLDEMEKVGLEPDLIT 313
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
L+ + + + + +KK PNV
Sbjct: 314 FNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNV 346
>gi|359494840|ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Vitis vinifera]
Length = 396
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 209/384 (54%), Gaps = 4/384 (1%)
Query: 6 HIRRLCTATTAAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
H R ++ + S+T SS S+A S L+SE DP + L+I + + S + R A
Sbjct: 13 HRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLD-RVA 71
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
+ + +LA SK F I ++ K P + E ++ + I +GQAGM + A+RTF+QM
Sbjct: 72 FSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMH 131
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+LG R+V S NALLF+C ++ Y + +F E PK Y + + SY +LK+ +SGSS
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+L EM KGV+ ++ +L Y + E+ ++ ME+ + ++ YN+R
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIR 251
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I + K L+D + +KP++ +Y L+ +CK +DEAKK+++ + GC
Sbjct: 252 IQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGC 311
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P++ + T +Y LC G+F+ A + KE + P+ +T+ LV GLV K++EA+
Sbjct: 312 KPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEARE 371
Query: 364 VIRTIKKKFPPNVLRAWKKVEEEL 387
+I IK+KF NV + W ++E L
Sbjct: 372 LIGQIKEKFSRNVDK-WNEIEAGL 394
>gi|147767812|emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
Length = 396
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 209/384 (54%), Gaps = 4/384 (1%)
Query: 6 HIRRLCTATTAAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
H R ++ + S+T SS S+A S L+SE DP + L+I + + S + R A
Sbjct: 13 HRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLD-RVA 71
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
+ + +LA SK F I ++ K P + E ++ + I +GQAGM + A+RTF+QM
Sbjct: 72 FSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMH 131
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+LG R+V S NALLF+C ++ Y + +F E PK Y + + SY +LK+ +SGSS
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+L EM KGV+ ++ +L Y + E+ ++ ME+ + ++ YN+R
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKMMEEYKMQPGISTYNIR 251
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I + K L+D + +KP++ +Y L+ +CK +DEAKK+++ + GC
Sbjct: 252 IQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGNLDEAKKLFKDMVNRGC 311
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P++ + T +Y LC G+F+ A + KE + P+ +T+ LV GLV K++EA+
Sbjct: 312 KPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTSLVNGLVSISKVEEAQE 371
Query: 364 VIRTIKKKFPPNVLRAWKKVEEEL 387
+I IK+KF NV + W ++E L
Sbjct: 372 LIGQIKEKFSRNVDK-WNEIEAGL 394
>gi|356555650|ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Glycine max]
Length = 388
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 209/385 (54%), Gaps = 10/385 (2%)
Query: 9 RLCTATTAAGSSTTASSISVSKAKSK-----LRSEFDPDKALDIYSSVSKHYASPVSSRY 63
RL +T + S +S+ SK K++ L+SE +P++ LDI + + S + R
Sbjct: 6 RLRHYSTTSILSPNSSTPLTSKQKTRSAIHLLKSETNPERILDICRAAALTPDSHIDRR- 64
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A L V +LA + F+ I T ++ K P + E +L + I YGQA M DHA+RTF +
Sbjct: 65 AFSLAVSKLAAAHHFAGIRTFLDDLKTRPDLRNEKFLSHAIVLYGQANMLDHAIRTFTE- 123
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+L +PRSV + N+LLFA ++ Y ++ ++ E PK Y++ P+ +Y ++K+ +SGS
Sbjct: 124 -DLPSPRSVKTLNSLLFAALLAKNYKELTRIYLEFPKTYSIQPNLDTYNTVIKAFAESGS 182
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+ +L EM+ + T L+ Y++ ++ ++ MEK V ++ YNV
Sbjct: 183 TSSVYSVLAEMDKNNIAPNVTTLNNSLSGFYREKKFDDVGKVLKLMEKYSVFPSISTYNV 242
Query: 244 RITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
RI + K L++ M G KP+++SY L+ +CK ++EAK+++ ++ G
Sbjct: 243 RIQSLCKLKRSSEAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRLFRDMKRRG 302
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ + T ++ LC G F+ A +V KE + +P+F T+K LV GL K+ EAK
Sbjct: 303 YLPDGECYFTLVHFLCCGGEFEAALEVAKECMGKGWVPNFTTMKSLVNGLAGALKVDEAK 362
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEEL 387
VI+ IK+KF + + W ++E L
Sbjct: 363 EVIKQIKEKFAESGDK-WDEIEAGL 386
>gi|357455193|ref|XP_003597877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162918|gb|ABD28713.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486925|gb|AES68128.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 439
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 195/349 (55%), Gaps = 9/349 (2%)
Query: 31 AKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN 90
A L+SE+DP K I+ S + + V +R+A TV RLA +KRF IE L+E K
Sbjct: 79 ALEALKSEWDPHKLFHIFKSNATN-PIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQKK 137
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
P+ +E ++ +I YG AGM HA+ TF QM + R+V SFNA L +SR +D+
Sbjct: 138 LPQSRREGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDFDE 197
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA-LELLNEMENKGVEVTTVTYTTV 209
+ +E+P+++++ D S + +K+ C++ +A L +L+ + NKGV+ VTYTT+
Sbjct: 198 ISRFLNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPDVVTYTTL 257
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRD 265
++ Y E LW++M KGV ++ +NVRI T D +L L M+
Sbjct: 258 ISAFYDHKRWEIGNGLWNQMVLKGVMPNLHTFNVRIQFLVTVRRVWDANKLMAL---MQR 314
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G+ PD ++ ++ + + + A +VY L + G +A ++T I++LC G+F +
Sbjct: 315 NGVTPDEVTLVLVIKGFFRAGYPEMAMRVYSALHDKGYKISANIYQTMIHNLCKRGDFSQ 374
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
AY + K+S+ + P+ +T+ +L+EGL K KI +AK ++ + + PP
Sbjct: 375 AYTLCKDSMRKNWFPNVDTIFMLLEGLKKSGKINKAKVIVALAEGRKPP 423
>gi|15221069|ref|NP_172629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200551|sp|Q9SAB4.1|PPR33_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11630, mitochondrial; Flags: Precursor
gi|4835794|gb|AAD30260.1|AC007296_21 Strong similarity to gi|3367521 F8K4.8 from Arabidopsis thaliana
BAC gb|AC004392 [Arabidopsis thaliana]
gi|14326576|gb|AAK60332.1|AF385742_1 At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|19548051|gb|AAL87389.1| At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|21593339|gb|AAM65288.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|332190642|gb|AEE28763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 209/382 (54%), Gaps = 9/382 (2%)
Query: 15 TAAGSSTTASSISVSKAKSK-----LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTV 69
+++ S T S++ + KS+ L+SE +PD+ L+I S S V R + V
Sbjct: 24 SSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVD-RIIFSVAV 82
Query: 70 RRLAKSKRFSDIETLIESH-KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
LA+ K F + L++ +N P E + I YG+A M D +++TF +++
Sbjct: 83 VTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEI 142
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
PR+V S NALLFAC ++ Y + ++ E+PK Y + PD +Y +++ C+SGS+ +
Sbjct: 143 PRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSY 202
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
++ EME K ++ T ++ +++ YK+ +E ++ M++ GV + VA YN+ I
Sbjct: 203 SIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCL 262
Query: 249 YG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
K LID + ++P++++Y+ L+ +C E +DEA ++E + NG P++
Sbjct: 263 CKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDS 322
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ T I+ LC G+F+ A + +ES+ + +P F+ +K LV GL + K+ EAK +I
Sbjct: 323 ECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAV 382
Query: 368 IKKKFPPNVLRAWKKVEEELGL 389
+K+KF NV W +VE L L
Sbjct: 383 VKEKFTRNV-DLWNEVEAALPL 403
>gi|224114223|ref|XP_002316701.1| predicted protein [Populus trichocarpa]
gi|222859766|gb|EEE97313.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 185/318 (58%), Gaps = 4/318 (1%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
+SV++H+ + V+ Y + T+RRL+ S++F +E ++E K +++E + LI YG
Sbjct: 54 ASVNEHFRTKVAI-YKE--TIRRLSVSRKFDYVEEILEDQKQYKDMSKEGFNARLISLYG 110
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
GMFDHA + FD+M E R+V+SFNALL AC S+ +D+V LF + K+ + PD
Sbjct: 111 SVGMFDHARKVFDEMRERQCARTVMSFNALLGACLSSKNFDEVEGLFRGLSKEIKIEPDL 170
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
ISY ++K+ C+ GS D A+ LL+EM+ KG+E +T+ T+L+ Y +G + ER+W +
Sbjct: 171 ISYNTVIKAFCEMGSLDSAVSLLDEMKRKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQ 230
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M++K V+ DV +YN ++ T E + ++++EM+ G++ DT SY+ L+ +
Sbjct: 231 MKEKNVEPDVRSYNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSALIRGFVNEGD 290
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ AK Y + +GC + T I G+F AY + K+ + + ++
Sbjct: 291 LKNAKHWYLEIGRSGCKRDKLTLEGLIPFALQKGDFMFAYGICKDVLCSKLLVQNALIQS 350
Query: 348 LVEGLVKKKKIKEAKGVI 365
+V+ L K+ +++ AK ++
Sbjct: 351 VVDALAKESRMEAAKELV 368
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 93/225 (41%), Gaps = 34/225 (15%)
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
SR +D V + ++ + ++S + + L+ + G D A ++ +EM + T +
Sbjct: 77 SRKFDYVEEILEDQKQYKDMSKEGFN-ARLISLYGSVGMFDHARKVFDEMRERQCARTVM 135
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR 264
++ +L N +E E L+ + K
Sbjct: 136 SFNALLGACLSSKNFDEVEGLFRGLSK--------------------------------- 162
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
+ ++PD ISYN ++ +C+ +D A + + ++ G P+ TF T ++ G F
Sbjct: 163 EIKIEPDLISYNTVIKAFCEMGSLDSAVSLLDEMKRKGLEPDLITFNTLLHGFYAKGRFV 222
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+++++ + PD + + GL +K++++ V+ +K
Sbjct: 223 DGERIWEQMKEKNVEPDVRSYNAKLLGLTLEKRMEDVVKVVEEMK 267
>gi|194689808|gb|ACF78988.1| unknown [Zea mays]
Length = 279
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 133/205 (64%), Gaps = 1/205 (0%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR- 244
KA + L+ M +G+ T YTT+++ +YK+ EAE LW EM + + DVA YNV+
Sbjct: 7 KAKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECEPDVATYNVKA 66
Query: 245 ITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ G PE + E++ EM AG+KPDT +YNFLMT YCK+ +++AK +Y L E GCS
Sbjct: 67 MYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSLAEKGCS 126
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+A T++ + LC G+FD +FK+S+ K+PDF T+K LVEGL K ++ +AK V
Sbjct: 127 ADAATYKHMLAELCAYGDFDAGLGIFKDSLKRRKVPDFRTMKGLVEGLAKGGRVADAKEV 186
Query: 365 IRTIKKKFPPNVLRAWKKVEEELGL 389
+ +KK FP N+L WKKVE+ELGL
Sbjct: 187 VAEVKKMFPENLLSGWKKVEKELGL 211
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
D + K+ +D MR+ G+ P Y L+ K +M +EA+ +++ + E+ C P+ T+
Sbjct: 4 DDAKAKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVESECEPDVATYN 63
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ G ++ +V E PD T L+ K K+++AK + ++ +K
Sbjct: 64 VKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSLAEK 123
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + D M E G + + L+ + + ++ ++ L+ E+ + PD +Y +
Sbjct: 8 AKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESLWKEMVES-ECEPDVATYNVKA 66
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ G ++ +E++ EME GV+ T TY ++ K G E+A+ L+ + +KG
Sbjct: 67 MYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCKSGKLEDAKVLYHSLAEKGCS 126
Query: 236 LDVAAY 241
D A Y
Sbjct: 127 ADAATY 132
>gi|297849542|ref|XP_002892652.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338494|gb|EFH68911.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 403
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 207/380 (54%), Gaps = 9/380 (2%)
Query: 15 TAAGSSTTASSISVSKAKSK-----LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTV 69
+++ S T +S++ + KS+ L+SE +P++ L+I S S V R + V
Sbjct: 24 SSSSSIFTLNSLTSKQKKSRATLSLLKSENNPNRILEICRSASLTPDYHVD-RIIFSVAV 82
Query: 70 RRLAKSKRFSDIETLIESH-KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
LAK K F + L++ +N P E + I YG+A M D +++TF +++
Sbjct: 83 VTLAKEKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRDLEQYEI 142
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
PR+V S NALLFAC ++ Y + ++ E+PK Y + PD +Y +++ C+SGS+ +
Sbjct: 143 PRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSLSY 202
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
++ EME K V+ T ++ +++ YK+ ++ ++ M++ GV + VA YN+ I
Sbjct: 203 SIVAEMERKWVKPTASSFGLMIDGFYKEEKFDDVRKVMRMMDEFGVHVGVATYNIMIQCL 262
Query: 249 YG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
K LID + ++P++++Y+ L+ +C E +DEA ++E + +G P++
Sbjct: 263 CKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVYSGYKPDS 322
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ T I LC G+F+ A + +ES+ + +P F+ +K LV GL K+ EAK +I
Sbjct: 323 ECYFTLIRCLCKGGDFETALILCRESMEKNWVPSFSIMKWLVNGLASVSKVDEAKELIAQ 382
Query: 368 IKKKFPPNVLRAWKKVEEEL 387
+K+KF NV W +VE L
Sbjct: 383 VKEKFTRNV-DLWNEVEAAL 401
>gi|224076667|ref|XP_002304978.1| predicted protein [Populus trichocarpa]
gi|222847942|gb|EEE85489.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 174/319 (54%), Gaps = 6/319 (1%)
Query: 56 ASPVSSRY-AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFD 114
+S SRY +TV+RL K R S I +++ KN P +T E + +LI YG+AGMFD
Sbjct: 49 SSSFRSRYDIYAITVKRLIKYNRLSMINEILDHQKNFPDMTNETFTAHLIYLYGKAGMFD 108
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A + FD+M +L PR+V SFNALL AC +R +D++ L + + ++ D +SY +
Sbjct: 109 DARKLFDEMPDLKCPRTVFSFNALLLACINARRFDEIKKLLADFRSELGITFDVVSYSIA 168
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C G A + +EM VE +T+ T+LN Y G + ER+WS M + V
Sbjct: 169 INGFCKMGDLVSAEMVFDEMIKSDVEPNLITFNTLLNGFYLNGKFADGERIWSRMVEMNV 228
Query: 235 DLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
DV +YN ++ R+K E+++EMRD GL+ D S+N L+ + E ++EA
Sbjct: 229 VPDVRSYNAKLHAL--ALENRMKEAIEVVEEMRDKGLELDVFSFNALIRGFLNGEDLEEA 286
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K+ Y + +GC PN TF+ I LC G+ A ++ +E ++L+V
Sbjct: 287 KQWYGEMRRHGCEPNRVTFQFLIPFLCEKGDVGFAVEICEEIFDKKWHARAEVLQLVVNR 346
Query: 352 LVKKKKIKEAKGVIRTIKK 370
LV + KI++A+ +++ KK
Sbjct: 347 LVMEAKIQDAEKLVQDGKK 365
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 92/190 (48%), Gaps = 6/190 (3%)
Query: 188 LELLNEM---ENKGVEVTTVTYTTVLNCLY-KQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
L ++NE+ + ++T T+T L LY K G ++A +L+ EM V ++N
Sbjct: 72 LSMINEILDHQKNFPDMTNETFTAHLIYLYGKAGMFDDARKLFDEMPDLKCPRTVFSFNA 131
Query: 244 RITNTYGGDP-ERLKELIDEMR-DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ + +K+L+ + R + G+ D +SY+ + +CK + A+ V++ + ++
Sbjct: 132 LLLACINARRFDEIKKLLADFRSELGITFDVVSYSIAINGFCKMGDLVSAEMVFDEMIKS 191
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
PN TF T + +G F +++ V ++ +PD + + L + ++KEA
Sbjct: 192 DVEPNLITFNTLLNGFYLNGKFADGERIWSRMVEMNVVPDVRSYNAKLHALALENRMKEA 251
Query: 362 KGVIRTIKKK 371
V+ ++ K
Sbjct: 252 IEVVEEMRDK 261
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ ++M + G V SFNAL+ ++ + E+ +++ P+++++ L+
Sbjct: 251 AIEVVEEMRDKGLELDVFSFNALIRGFLNGEDLEEAKQWYGEM-RRHGCEPNRVTFQFLI 309
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C+ G A+E+ E+ +K V+N L + ++AE+L + +K +
Sbjct: 310 PFLCEKGDVGFAVEICEEIFDKKWHARAEVLQLVVNRLVMEAKIQDAEKLVQDGKKHKYE 369
Query: 236 L 236
L
Sbjct: 370 L 370
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 209/374 (55%), Gaps = 8/374 (2%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVS 60
M++L + R T +TA ++ T ++I S + R E + ++ + S++
Sbjct: 1 MSALSRLFR-STFSTATSAAATENTIVRSLSNEVFR-ERSLKRLVEKFKKASENERFRTK 58
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
S +D T+RRLA +K+F +E ++E+ K +++E + LI YG +GMFD+A + F
Sbjct: 59 SAIYKD-TIRRLAAAKKFRYVEEILENQKQYQDMSKEGFNARLISLYGSSGMFDNARKVF 117
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D+M E R+V+SFNALL AC S+ +D+V LF + ++ + PD +SY ++K+ C+
Sbjct: 118 DEMLERKCARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKAFCE 177
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
GS D A+ LL+E+E KG++ +T+ T+LN LY G + ER+W M++K V D +
Sbjct: 178 MGSLDSAVSLLDEIEKKGLKPDLITFNTLLNGLYANGRFDAGERIWQRMKEKNVKPDGRS 237
Query: 241 YNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN ++ +R+K+ +++EM+ G++ D SYN L+ + ++EAK Y
Sbjct: 238 YNEKLLGL--ALEKRMKDATKVVEEMKSEGIEFDIFSYNALIRGFVNEGDLEEAKGWYGE 295
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ ++ P+ TF+T I + G+ A+ + K+++ ++ +++ L K+ K
Sbjct: 296 IRKSDIKPDKLTFKTLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKESK 355
Query: 358 IKEAKGVIRTIKKK 371
I EAK ++ K +
Sbjct: 356 INEAKELVELSKAR 369
>gi|224114227|ref|XP_002316702.1| predicted protein [Populus trichocarpa]
gi|222859767|gb|EEE97314.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 203/368 (55%), Gaps = 8/368 (2%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIY--SSVSKHYASP 58
M+SL +R L A A+ S+ + +I +++ E + + ++ + +SV + + +
Sbjct: 1 MSSL--LRLLGRALPASTSAAASDTIKAKSYWTEIIKERNLEHLVEKFKNASVDEDFRTK 58
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
+ ++ RLA +++F+ +E ++E K I +E + LI YG AGMFD+A +
Sbjct: 59 T---FVYKNSIHRLAAARKFNYVEEILEDQKQYEDIYKEGFNARLISLYGVAGMFDNARK 115
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD+M E R+V+SFNALL AC S+ +D+ LF + K+ + PD +SY +LK+
Sbjct: 116 VFDEMFERKCARTVVSFNALLGACVNSKKFDEAEGLFKGLSKELEIEPDLVSYNTVLKAF 175
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C+ GS D A LL+EME KG+E +T+ T+L+ Y +G + ER+W +M++K V+ D+
Sbjct: 176 CEMGSMDSAATLLDEMEKKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDI 235
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+YN ++ T E + ++++EM+ G++ DT SY+ L+ + + +AK Y
Sbjct: 236 RSYNAKLLGLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSTLIRGFVNEGDLKKAKHWYHE 295
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ +GC + T I G+F AY + K+ + + ++ +V+ L K +
Sbjct: 296 IGRSGCKRDKLTLEGLIPFALQKGDFMFAYGICKDVLCSKLLVQNALIQSVVDALAKDSR 355
Query: 358 IKEAKGVI 365
++EAK ++
Sbjct: 356 LEEAKKLV 363
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G D A ++ +EM + T V++ +L +EAE L+ + K
Sbjct: 107 AGMFDNARKVFDEMFERKCARTVVSFNALLGACVNSKKFDEAEGLFKGLSK--------- 157
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ ++PD +SYN ++ +C+ MD A + + +E+
Sbjct: 158 ------------------------ELEIEPDLVSYNTVLKAFCEMGSMDSAATLLDEMEK 193
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G P+ TF T ++ G F +++++ + PD + + GL +K++++
Sbjct: 194 KGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDIRSYNAKLLGLTLEKRMED 253
Query: 361 AKGVIRTIK 369
V+ +K
Sbjct: 254 VVKVVEEMK 262
>gi|255554937|ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542351|gb|EEF43893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 397
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 214/397 (53%), Gaps = 20/397 (5%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVS 60
+ SL +RR + T + T ++IS+ L+SE +P K ++I +S S +P +
Sbjct: 9 IHSLIKVRREFSTTPLSSKERTRAAISL------LKSEENPQKIIEICNSAS---LTPEA 59
Query: 61 --SRYAQDLTVRRLAKSKRFSDIETLIESHK-NDPKI-TQEPYLCNLIRSYGQAGMFDHA 116
R A + + +L+KS FS I+ ++ + + P + T E + + I +GQA M DHA
Sbjct: 60 HLDRIAFSVAITKLSKSNNFSFIQQFLDDLRVSRPDLRTSERFAAHAIVLFGQAAMVDHA 119
Query: 117 MRTFDQMDE----LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+RTF + LG SV FNALLFAC ++ Y +V +F E PK YN+ P+ SY
Sbjct: 120 VRTFKEYHTDVIGLGNNGSVKVFNALLFACYLAKDYSEVKRVFLEFPKNYNIEPNLDSYN 179
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EK 231
++KS CDS SS +L EM+ K ++ T+ +L YK+ E+ ++ M +K
Sbjct: 180 TVIKSFCDSESSSSGFSVLAEMDRKRLKPNATTFGHLLAGFYKEEKYEDVGKVLEMMKDK 239
Query: 232 KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
G+ V+ YN+RI + K L+D M +KP++++Y L+ +C ++
Sbjct: 240 YGIRPGVSTYNIRIQSLCKLKKSAEAKALLDGMLSRQMKPNSVTYAHLIHGFCNEGDLEG 299
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
K++++ + G P++ + T +++LC +F+ A ++ KES+ +P+ T+K LV
Sbjct: 300 GKRLFKDMVNRGYQPDSACYFTLLHYLCKGQDFETALRICKESIGKDWVPNIATMKSLVN 359
Query: 351 GLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
GL K+ EAK +I IK+KF NV W+++E L
Sbjct: 360 GLAGIGKVDEAKELIAKIKEKFTKNV-STWEEIEAGL 395
>gi|225425092|ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 200/392 (51%), Gaps = 9/392 (2%)
Query: 1 MTSLRHI-RRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV 59
M SL I RRL + A S+ + + AKS + SE DP+K I+ S ++A
Sbjct: 1 MASLCRIPRRLLS--LARFSTLSDPFTTFLAAKSAVESEPDPEKLAHIFHHQSSNFARFR 58
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
R L+ RRL++S R +E LI+ K P E + LI Y +GM DHA+RT
Sbjct: 59 RHRPLYQLSCRRLSRSGRLDLVERLIDHQKTLPHPRTEGFWIRLIMLYSTSGMVDHALRT 118
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F QM + + S A+L + L D++ +F+ +P + +SP SY L+LK+ C
Sbjct: 119 FHQMVQDRVQLTEKSLCAILTVYLDNDLIDQLHTVFNTMPSEIGVSPGTKSYSLVLKAFC 178
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+ A +LL++MEN + +Y +L + G+ E + + E++ KG++ D
Sbjct: 179 QQKDMESARKLLHKMENPDIG----SYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCT 234
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
YN RI + R K+L+DEM G+KP++ SYN ++ +CK + A+KV +
Sbjct: 235 TYNHRILRFCKNKESVRAKKLLDEMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGRM 294
Query: 299 EENG-CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+G +P + ++ T H+ G FD A + KE + +P F + LV+GLV+ K
Sbjct: 295 LADGYVAPCSISYITLFQHMVKEGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEISK 354
Query: 358 IKEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
++ AK V+ +KK+ N +WK E L L
Sbjct: 355 VEAAKEVVEKMKKRLKGNAADSWKTHEAALPL 386
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 165/299 (55%), Gaps = 1/299 (0%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TVRRLA +KRF + +IE K+ I+ E + LI YG++ M HA + FD+M +
Sbjct: 59 TVRRLAGAKRFRWVRDIIEHQKSYADISNEGFSARLITLYGKSNMHRHAQKLFDEMPQRN 118
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
RSV+S NALL A S+ YD V LF ++P + ++ PD +SY +K+ + GS D A
Sbjct: 119 CERSVLSLNALLAAYLHSKQYDVVERLFKKLPVQLSVKPDLVSYNTYIKALLEKGSFDSA 178
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ +L EME GVE +T+ T+L+ LY +G E+ E+LW ++ +K V ++ YN R+
Sbjct: 179 VSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWEKLGEKNVVPNIRTYNARLLG 238
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
E +EM G+KPD S+N L+ + +DEAKK + +E++ P+
Sbjct: 239 LAVAKRAGEAVEFYEEMEKKGVKPDLFSFNALIKGFANEGNLDEAKKWFGEIEKSEHDPS 298
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
T+ + LC G+ A ++ K+ + D + ++++V LV + + EAK ++
Sbjct: 299 KRTYAIIVPFLCEKGDLKTAIEMVKQIFLTRCRVDVSLLRIVVGKLVSESMVSEAKEIV 357
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAE-EAERLWSEMEKKGVDLDVAAYNVRI-----T 246
E + +++ ++ L LY + N A++L+ EM ++ + V + N + +
Sbjct: 77 EHQKSYADISNEGFSARLITLYGKSNMHRHAQKLFDEMPQRNCERSVLSLNALLAAYLHS 136
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
Y K+L ++ +KPD +SYN + + D A V E +E++G +
Sbjct: 137 KQYDVVERLFKKLPVQL---SVKPDLVSYNTYIKALLEKGSFDSAVSVLEEMEKDGVESD 193
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF T + L G F+ K++++ + +P+ T + GL K+ EA
Sbjct: 194 LITFNTLLDGLYSKGRFEDGEKLWEKLGEKNVVPNIRTYNARLLGLAVAKRAGEAVEFYE 253
Query: 367 TIKKK 371
++KK
Sbjct: 254 EMEKK 258
>gi|9858777|gb|AAG01124.1|AF273333_9 BAC19.9 [Solanum lycopersicum]
Length = 353
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 150/262 (57%), Gaps = 48/262 (18%)
Query: 3 SLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
+LR R L T A SS + +IS+SKAKSKL+ E DPDKA +IYSSV Y S +SSR
Sbjct: 6 ALRQARHLTTTAAAVASSPSTITISISKAKSKLKVEHDPDKAFEIYSSVYDRYVSSMSSR 65
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
YAQ+ TV+RLAKS RFSDIE +ESHKN PKI F H
Sbjct: 66 YAQEFTVKRLAKSHRFSDIENFLESHKNRPKI------------------FIH------- 100
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
N+ L+ C R L DEI KY PDK+SY +L++S+C+
Sbjct: 101 -------------NSFLW-CRRH--------LLDEISVKYGFLPDKVSYDILIRSYCEMR 138
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
SS A+++L +E K VE+TT+T+TT+L+ YK+G +EAE++W+EM KG DV AYN
Sbjct: 139 SSKMAIKILKVIEEKSVEITTITFTTILHSFYKKGKNDEAEKVWNEMVNKGCGPDVGAYN 198
Query: 243 VRITNTYGGDPERLKELIDEMR 264
V+I N G+ +RL L R
Sbjct: 199 VKIINIQ-GERQRLAPLSQHGR 219
>gi|413934838|gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 590
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 188/364 (51%), Gaps = 26/364 (7%)
Query: 19 SSTTASSISVSKAKS--------KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR 70
SS+ + S++ + AK +++ E DP++ ++ + + H V +R+A + V
Sbjct: 162 SSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRA-NAHNRLLVENRFAFEDAVA 220
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
RLA ++R +E ++E HK P+ G HA+RTF +M G PR
Sbjct: 221 RLAGARRNDLVEEILEQHKALPR----------------GGGKGHALRTFQEMGMYGCPR 264
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ S NA + R+R++D+ LF+E P+KY++ D IS ++K CD G A +
Sbjct: 265 TAKSLNATMKVLLRARMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRV 324
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
+ ME G+ +TY T++ YK G E + LW+ M +G +A YNVRI
Sbjct: 325 MQGMERAGLRSDVITYMTLMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVN 384
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + E+ ++ AG+KPD I+YN ++ + + AK V+ + GC PN+
Sbjct: 385 RGRGWQANEMARKIYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKV 444
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
++T +++LC +FD A+++ K+S+ + P +T+ L++GL+ K + K +++ +
Sbjct: 445 YQTMVHYLCERRDFDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVT 504
Query: 370 KKFP 373
+ P
Sbjct: 505 GRKP 508
>gi|413934837|gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 529
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 188/364 (51%), Gaps = 26/364 (7%)
Query: 19 SSTTASSISVSKAKS--------KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR 70
SS+ + S++ + AK +++ E DP++ ++ + + H V +R+A + V
Sbjct: 162 SSSPSPSLATAAAKEEQEQPVLVRIKHERDPERLYQLFRA-NAHNRLLVENRFAFEDAVA 220
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
RLA ++R +E ++E HK P+ G HA+RTF +M G PR
Sbjct: 221 RLAGARRNDLVEEILEQHKALPR----------------GGGKGHALRTFQEMGMYGCPR 264
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ S NA + R+R++D+ LF+E P+KY++ D IS ++K CD G A +
Sbjct: 265 TAKSLNATMKVLLRARMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRV 324
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
+ ME G+ +TY T++ YK G E + LW+ M +G +A YNVRI
Sbjct: 325 MQGMERAGLRSDVITYMTLMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVN 384
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + E+ ++ AG+KPD I+YN ++ + + AK V+ + GC PN+
Sbjct: 385 RGRGWQANEMARKIYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKV 444
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
++T +++LC +FD A+++ K+S+ + P +T+ L++GL+ K + K +++ +
Sbjct: 445 YQTMVHYLCERRDFDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVT 504
Query: 370 KKFP 373
+ P
Sbjct: 505 GRKP 508
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 166/302 (54%), Gaps = 1/302 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+RRL ++K+FS I+ +++ K I E ++ ++ YG +GM +HA + FD+M EL
Sbjct: 94 IRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNC 153
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
R+V SFNALL A S+ D+ F E+P+K ++PD ++Y ++K+ C GS D L
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDIL 213
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
+ E+E G E +++ T+L Y++ E +R+W M+ K + ++ +YN R+
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
T LID M+ G+ PD +YN L+T Y + ++E K Y ++E G +P+
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I LC G+ D+A +V +E++ + N K +VE L+ KI EA +++
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393
Query: 368 IK 369
K
Sbjct: 394 GK 395
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 166/302 (54%), Gaps = 1/302 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+RRL ++K+FS I +++ K I E ++ ++ YG +GM +HA + FD+M EL
Sbjct: 97 IRRLREAKKFSTIHEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNC 156
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
R+V SFNALL A SR D+ F E+P+K ++PD ++Y ++K+ C +GS D L
Sbjct: 157 ERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTGSMDDIL 216
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
+ E+E G E +++ T+L Y++ E +R+W M+ K + ++ +YN R+
Sbjct: 217 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYNSRVRGL 276
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
T +LI+ M+ G+ PD +YN +T Y + ++E K Y ++E G +P+
Sbjct: 277 TRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDNNLEEVMKWYNEMKEKGLTPDT 336
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I LC G+ D+A ++ +E++ + N K +VE L+ KI EA +++
Sbjct: 337 VTYCLLIPLLCKKGDLDRAVEISEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 396
Query: 368 IK 369
K
Sbjct: 397 GK 398
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 191/369 (51%), Gaps = 26/369 (7%)
Query: 8 RRLCTATTAAGSSTTASSI-SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ- 65
R CTAT A +T A+SI S+S+ D K + + + V K + + R+ +
Sbjct: 7 RAFCTATEPA--TTIAASIRSISE---------DLYKEVKLKNVVEKFKKASDNDRFRKK 55
Query: 66 ----DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
+ TVRRLA ++RF + ++E K I+ E + LI YG++GM HA + FD
Sbjct: 56 TGIYEDTVRRLAGARRFRWVRDILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFD 115
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M + R+V+S NALL A S YD V LF ++P + ++ PD ++Y ++K+ C+
Sbjct: 116 EMPQRNCSRTVLSLNALLAAYLHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKAFCEK 175
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
GS D AL +L E+E KG+ ++T+ T+L+ LY +G EE E++W +M V V +Y
Sbjct: 176 GSFDSALSVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSY 235
Query: 242 NVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
++ G E K EL EM G+KPD N ++ + +DEAKK +
Sbjct: 236 CSKLV----GLAEVKKAGEAVELFREMEKVGVKPDLFCINAVIKGFVNEGNLDEAKKWFG 291
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ ++ P+ T+ + LC G+F A ++ KE D ++ +V+ L +
Sbjct: 292 EIAKSEYDPDKNTYSIIVPFLCEKGDFKTAIEMCKEIFNNRCRVDATLLQGVVDKLASEG 351
Query: 357 KIKEAKGVI 365
I EAK ++
Sbjct: 352 MITEAKEIV 360
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 193 EMENKGVEVTTVTYTTVLNCLY-KQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-----T 246
E + + +++ ++ L LY K G + A +++ EM ++ V + N + +
Sbjct: 80 EHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHS 139
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ Y E ++L ++ +KPD ++YN ++ +C+ D A V +EE G SP+
Sbjct: 140 HKYDVVQELFRDLPTQL---SIKPDLVTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPD 196
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ TF T + L G F++ KV+++ + + P + + GL + KK EA + R
Sbjct: 197 SITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSYCSKLVGLAEVKKAGEAVELFR 256
Query: 367 TIKK 370
++K
Sbjct: 257 EMEK 260
>gi|224113615|ref|XP_002316521.1| predicted protein [Populus trichocarpa]
gi|222859586|gb|EEE97133.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 213/397 (53%), Gaps = 26/397 (6%)
Query: 4 LRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVS--S 61
LRH T+ ++ S T A A S L+SE +P+K L+I S +P +
Sbjct: 16 LRHHINFSTSPLSSKSKTCA-------ALSLLKSETNPEKILEICRSAC---LTPYAHID 65
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKND-PKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
R + + +LAKS FS I+ + + P + + + I YGQAGM D A+R F
Sbjct: 66 RITFSVAIDKLAKSNNFSYIDDFLTDLRTSRPDLRTVRFAAHSIILYGQAGMIDQAIRLF 125
Query: 121 ------DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
+Q D + T SV NALLF+C ++ YD+V +F + K+Y + P+ ++ +
Sbjct: 126 KEYHEKNQNDVVLTSGSVKLLNALLFSCILAKKYDEVNRVFVDFSKRYKIEPNLETFNTV 185
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK-G 233
++S C+SGSS +LNEM+ KGV+ T+ + Y++ E+ + +E+ G
Sbjct: 186 IQSFCESGSSSSCYSVLNEMDMKGVKPNETTFGHLFAGFYREEKYEDVGTVSKMIEEDYG 245
Query: 234 VDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+ + YN+RI + +R +E L++ G+ P+ ++Y+ L+ +C ++E
Sbjct: 246 ISAGIGVYNIRIHSL--CKLKRAREANVLLEGCLSKGITPNGVTYSHLILGFCMEGDLEE 303
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
AK++++ +E GC P + + T +Y L G+F+ AY+V KES+ +P+F+T+K+LV+
Sbjct: 304 AKRLFKSMENRGCQPAYSCYATLVYFLGKGGDFESAYRVCKESMGKKMVPNFSTMKILVQ 363
Query: 351 GLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
GL ++ +AK +I +K++F N+ W +VE L
Sbjct: 364 GLASSGEVDKAKELIGEVKERFSKNI-ELWNEVEAGL 399
>gi|357125390|ref|XP_003564377.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Brachypodium
distachyon]
Length = 390
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 156/285 (54%), Gaps = 8/285 (2%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I +GQAG+ A+ TF +P S S NALLFAC + + + +F P +N
Sbjct: 111 IALFGQAGLLPDAISTFQS-----SP-STRSLNALLFACLVAGNHAEAARIFQTFPDAHN 164
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P+ ++ ++KS +SG++ + +EM KGV+ T+TT + YK+ + E
Sbjct: 165 VKPNTETFNAIIKSFSESGTTRSFYSVFDEMCKKGVKPNATTFTTAIAGFYKEEQFGDVE 224
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
++ M+K G + YN R+ G K L++EM G KP ++YN L+ +
Sbjct: 225 KVIELMKKHGCGESLQVYNARVQGLCKLGRSGEAKALLNEMVKRGTKPSWVTYNHLIYGF 284
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK ++E K++Y+ + + G +++ + T I++LC +G+FD A V+ E+ +P F
Sbjct: 285 CKEGDLEEVKRLYKEMGKKGLVGDSSFYFTLIFYLCKAGDFDSALGVYNETTARSWVPCF 344
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
+T+K+LV GL K+ EAKG+I +K+KFP WK+VEE L
Sbjct: 345 STMKMLVNGLAGSSKVDEAKGIIEKMKEKFPDKA-EGWKEVEEAL 388
>gi|20146263|dbj|BAB89045.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|20160842|dbj|BAB89782.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|215700983|dbj|BAG92407.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 390
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 158/285 (55%), Gaps = 8/285 (2%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I +GQAG+ A+ TF +P S S NALLFAC S + + +F P Y+
Sbjct: 111 IALFGQAGLLPDAVSTFKS-----SP-STRSLNALLFACLVSGNHAEAARVFQTFPDAYS 164
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P+ ++ ++KS +SG++ +L+EM KGV+ T+TT + YK+ ++
Sbjct: 165 VKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVG 224
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
++ M+K G + +NVR+ G K L++EM G KP ++YN L+ +
Sbjct: 225 KVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGF 284
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK ++EAK++Y+ + + G +++ + IY+LC G+FD A V+ E + +P F
Sbjct: 285 CKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCF 344
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
+T+K+LV GL ++ EAKG+I +K+KF P+ WK+VE+ L
Sbjct: 345 STMKMLVNGLAGSSRVDEAKGIIEKMKEKF-PDKAEGWKEVEDAL 388
>gi|125528002|gb|EAY76116.1| hypothetical protein OsI_04043 [Oryza sativa Indica Group]
Length = 390
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 158/285 (55%), Gaps = 8/285 (2%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I +GQAG+ A+ TF +P S S NALLFAC S + + +F P Y+
Sbjct: 111 IALFGQAGLLPDAVSTFKS-----SP-STRSLNALLFACLVSGNHAEAARVFQTFPDAYS 164
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P+ ++ ++KS +SG++ +L+EM KGV+ T+TT + YK+ ++
Sbjct: 165 VKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCKKGVKPNATTFTTAIAGFYKEERFDDVG 224
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
++ M+K G + +NVR+ G K L++EM G KP ++YN L+ +
Sbjct: 225 KVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGF 284
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK ++EAK++Y+ + + G +++ + IY+LC G+FD A V+ E + +P F
Sbjct: 285 CKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCF 344
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
+T+K+LV GL ++ EAKG+I +K+KF P+ WK+VE+ L
Sbjct: 345 STMKMLVNGLAGSSRVDEAKGIIEKMKEKF-PDKAEGWKEVEDAL 388
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 5/301 (1%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TVRRLA ++RF I ++E K I+ E + LI YG++GM HA + FD+M +
Sbjct: 64 TVRRLAGARRFRWIRDILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRN 123
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
R+V+S NALL A SR YD V LF ++P + ++ PD ++Y ++K+ C+ GS D A
Sbjct: 124 CSRTVLSLNALLAAYLHSRKYDIVGELFRDLPTQLSIKPDLVTYNTIIKAFCEKGSFDSA 183
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L + E+E KG+ ++T+ T+L+ LY +G EE E++W +M K V V +Y ++
Sbjct: 184 LSVFQEIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMGVKNVAPGVRSYCSKLVG 243
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ +++ E L EM G+KPD N ++ + +DEAKK + + +
Sbjct: 244 L--AEVKKMGEAVVLFREMEKLGVKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKFEYD 301
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ + LC G+F A + KE D ++ +V+ L + EAK +
Sbjct: 302 PDRNTYSIIVPFLCEKGDFKTAIDMCKEIFNNRCRVDATLLQGVVDKLASEGMDTEAKEI 361
Query: 365 I 365
+
Sbjct: 362 V 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 92/184 (50%), Gaps = 9/184 (4%)
Query: 193 EMENKGVEVTTVTYTTVLNCLY-KQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-----T 246
E + + +++ ++ L LY K G + A +++ EM ++ V + N + +
Sbjct: 82 EHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHS 141
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
Y E ++L ++ +KPD ++YN ++ +C+ D A V++ +EE G SP+
Sbjct: 142 RKYDIVGELFRDLPTQL---SIKPDLVTYNTIIKAFCEKGSFDSALSVFQEIEEKGLSPD 198
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ TF T + L G F++ KV+++ + + P + + GL + KK+ EA + R
Sbjct: 199 SITFNTLLDGLYSKGRFEEGEKVWEQMGVKNVAPGVRSYCSKLVGLAEVKKMGEAVVLFR 258
Query: 367 TIKK 370
++K
Sbjct: 259 EMEK 262
>gi|242054629|ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
gi|241928435|gb|EES01580.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
Length = 439
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 34/394 (8%)
Query: 15 TAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAK 74
AA S S++K + E DPDKA V R ++ V RLA
Sbjct: 40 AAAKPDERRESRSLNKTLKAIFRERDPDKAG-------------VPHR-VYEVAVARLAS 85
Query: 75 SKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP---RS 131
R I +I+S K + + + L+R G A M HA F G P +S
Sbjct: 86 FGRHDAIAAIIDSQKPFIEASSVGFAARLVRLCGGASMPSHAAAIFH-----GLPPKHKS 140
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKY-NLSPDKISYGLLLKSHCDSGSSDKALEL 190
V++FNALL A + +D + F +IP + + P SY +L+ + C AL++
Sbjct: 141 VMTFNALLAAYVDASDFDALTTTFQQIPASHPTIIPTVYSYNILISALCQKPELSAALDV 200
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
+ ME +GV +++ +LN Y + ++AE++W M+++ ++ D +YN ++
Sbjct: 201 IALMEKRGVSPDIISFNILLNGFYNNDSFDDAEKVWEMMKERNIEPDEKSYNAKLRGLVS 260
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G E LI+ M+ G KPD++SYN L+ YCK ++EAKKVY+ L +N C+PN T
Sbjct: 261 QGRVEDAVALIERMQKEGPKPDSVSYNELIRGYCKEGRLNEAKKVYDDLIKNECAPNRGT 320
Query: 310 FRTWIYHLCGSGNFDKA----YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
F T + HL +G D+A +++F VH + ++ +V L+ ++ EAK ++
Sbjct: 321 FHTLVPHLVEAGELDRALSCCHEIFSRKCRVH----CSLLQGVVTALIAASRMGEAKRIV 376
Query: 366 RTIKKK-FPPNVLRAWKKVEEELGL-VPAPAVGD 397
+K +P LR ++ GL +P PA D
Sbjct: 377 HLGRKNYYPQKHLRMPPHTRKDEGLKMPQPAGED 410
>gi|297743432|emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSK--------------AKSKLRSEFDPDKALD 46
M SLR IRR C A + A +++ +K A KL++E DP++
Sbjct: 1 MLSLRPIRRFCHAAAITAIAPVAETVTSAKSNCIKKPDKPLEEPALVKLKAERDPERLFQ 60
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
++ + + H V +R+A + TV RLA + RF IE L+E K P+ +E ++ +I
Sbjct: 61 LFKA-NAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEHQKTLPQGRREGFIVRIIML 119
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
YG+AGM A+ TF M G R+V SFNA L T+S + + + ++P K+ +
Sbjct: 120 YGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVPFKFGIEL 179
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D S +++K+ CD +KA ++ EME GV VTYTT+++ YK E LW
Sbjct: 180 DVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEVGNGLW 239
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYC 283
+ M KG ++A +NVRI Y + R + L+ M G+ PD ++YN ++ +C
Sbjct: 240 NLMVMKGCLPNLATFNVRI--QYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKGFC 297
Query: 284 KNEMMDEAKK 293
+ ++ AKK
Sbjct: 298 QAGYLEMAKK 307
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 2/184 (1%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK-GVDLDVA 239
+G +A++ +M G + T ++ L L + + E + ++ K G++LDV
Sbjct: 123 AGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYDLEAIDLFLRDVPFKFGIELDVF 182
Query: 240 AYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+ N+ I D E+ ++ EM AG+ PD ++Y L++ + K+ + ++ +
Sbjct: 183 SVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYTTLISAFYKSNRWEVGNGLWNLM 242
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
GC PN TF I +L +A + + PD T L+++G + +
Sbjct: 243 VMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYLGITPDEVTYNLVIKGFCQAGYL 302
Query: 359 KEAK 362
+ AK
Sbjct: 303 EMAK 306
>gi|125572292|gb|EAZ13807.1| hypothetical protein OsJ_03733 [Oryza sativa Japonica Group]
Length = 351
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 155/280 (55%), Gaps = 8/280 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG+ A+ TF +P S S NALLFAC S + + +F P Y++ P+
Sbjct: 77 RAGLLPDAVSTFKS-----SP-STRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNT 130
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++ ++KS +SG++ +L+EM KGV+ T+TT + YK+ ++ ++
Sbjct: 131 DTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGKVIEL 190
Query: 229 MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M+K G + +NVR+ G K L++EM G KP ++YN L+ +CK
Sbjct: 191 MKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEGD 250
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++EAK++Y+ + + G +++ + IY+LC G+FD A V+ E + +P F+T+K+
Sbjct: 251 LEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKM 310
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
LV GL ++ EAKG+I +K+KF P+ WK+VE+ L
Sbjct: 311 LVNGLAGSSRVDEAKGIIEKMKEKF-PDKAEGWKEVEDAL 349
>gi|226490900|ref|NP_001141371.1| uncharacterized protein LOC100273462 [Zea mays]
gi|194704218|gb|ACF86193.1| unknown [Zea mays]
gi|414880165|tpg|DAA57296.1| TPA: hypothetical protein ZEAMMB73_527047 [Zea mays]
Length = 393
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 196/398 (49%), Gaps = 23/398 (5%)
Query: 3 SLRHI--RRLCTATT-AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSS--------- 50
++RHI RRL TA A T AS ++ S + L S A+ + S
Sbjct: 4 AVRHIVRRRLSTAAAITAPVPTPASILNPSSPSTPLTSRHKTRLAISLLKSSPPPPPDQI 63
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
+S A+ ++ D LA SK S +TL + P+ L +GQA
Sbjct: 64 LSICRAAALTPETHIDRIALSLAASKLSSAPDTLRDLASTVLTPRHAPHAIAL---FGQA 120
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
+ A+ TF +P S S NAL+FAC S + + +F P + + P+ +
Sbjct: 121 HLLPDAISTFQS-----SP-STRSLNALIFACIVSGNHTEAARVFQTFPDAHGVKPNTET 174
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ ++KS +SG+ + +EM KG++ ++T+TT L YK+ ++ +++ M+
Sbjct: 175 FNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMK 234
Query: 231 KKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
K G + YNVR+ + G + L+DEM G KP+ ++YN L+ +CK ++
Sbjct: 235 KNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLE 294
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EAK++Y+ + G ++ + IY+LC + D A ++ E + +P F+T+K+LV
Sbjct: 295 EAKRLYKEMGRKGLVGDSDFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLV 354
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
GL +I EAKG+I +K+KF P+ WK+VEE
Sbjct: 355 NGLAGSSRIDEAKGIIEKMKEKF-PDKTEGWKEVEEAF 391
>gi|195620494|gb|ACG32077.1| membrane-associated salt-inducible protein [Zea mays]
Length = 393
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 196/398 (49%), Gaps = 23/398 (5%)
Query: 3 SLRHI--RRLCTATT-AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSS--------- 50
++RHI RRL TA A T AS ++ S + L S A+ + S
Sbjct: 4 AVRHIVRRRLSTAAAITAPVPTPASILNPSSPSTPLTSRHKTRLAISLLKSSPPPPPDQI 63
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
+S A+ ++ D LA SK S +TL + P+ L +GQA
Sbjct: 64 LSICRAAALTPETHIDRIALSLAASKLSSAPDTLRDLASTVLTPRHAPHAIAL---FGQA 120
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
+ A+ TF +P S S NAL+FAC S + + +F P + + P+ +
Sbjct: 121 HLLPDAISTFQS-----SP-STRSLNALIFACIVSGNHTEXARVFQTFPDAHGVKPNTET 174
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ ++KS +SG+ + +EM KG++ ++T+TT L YK+ ++ +++ M+
Sbjct: 175 FNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMK 234
Query: 231 KKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
K G + YNVR+ + G + L+DEM G KP+ ++YN L+ +CK ++
Sbjct: 235 KNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLE 294
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EAK++Y+ + G ++ + IY+LC + D A ++ E + +P F+T+K+LV
Sbjct: 295 EAKRLYKEMGRKGLVGDSDFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLV 354
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
GL +I EAKG+I +K+KF P+ WK+VEE
Sbjct: 355 NGLAGSSRIDEAKGIIEKMKEKF-PDKTEGWKEVEEAF 391
>gi|297741760|emb|CBI32989.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 158/280 (56%), Gaps = 2/280 (0%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AGM + A+RTF+QM +LG R+V S NALLF+C ++ Y + +F E PK Y + +
Sbjct: 132 RAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNL 191
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
SY +LK+ +SGSS +L EM KGV+ ++ +L Y + E+ ++
Sbjct: 192 DSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVLKM 251
Query: 229 MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
ME+ + ++ YN+RI + K L+D + +KP++ +Y L+ +CK
Sbjct: 252 MEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKEGN 311
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+DEAKK+++ + GC P++ + T +Y LC G+F+ A + KE + P+ +T+
Sbjct: 312 LDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTMTS 371
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
LV GLV K++EA+ +I IK+KF NV + W ++E L
Sbjct: 372 LVNGLVSISKVEEARELIGQIKEKFSRNVDK-WNEIEAGL 410
>gi|449438040|ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 189/370 (51%), Gaps = 10/370 (2%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRY--AQDLTVRRLAKSKRFSDIETL 84
S+ AKS + S+ DPDK + S P RY ++R+LA+++RF I+ +
Sbjct: 39 SLRAAKSAILSQSDPDKLAQSFIQAS---TLPSFCRYRPIYHQSIRKLARAQRFDLIDVI 95
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ-MDELGTPRSVISFNALLFACT 143
I+SH P T E + LI Y GM + A+ DQ + S S A+L
Sbjct: 96 IQSHHKSPSATSEGFWIRLIMLYSSVGMVNQALYILDQAILHKSCNLSEKSLCAILSVFL 155
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM--ENKGVEV 201
+ + +KV +F IP+K ++P +S+ L+LK+ A ++E+ ++ V
Sbjct: 156 DNSMPEKVHEMFRSIPEKIGVTPTAVSHNLVLKAFVRQNDLPSARNWIDELCKDDAKVIP 215
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
++T +L + G+ + + E+ K+G++ ++A YN RI+ + R K+++
Sbjct: 216 NIDSFTILLGAYWSNGDMIGFDEIEKEISKRGLEFNLATYNYRISRLCKNKECARAKKIL 275
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCG 319
DEM G+KP++ SY+ ++ YC ++ A K+ +G+ E+G SP + + I +
Sbjct: 276 DEMISKGVKPNSSSYDSIIHGYCDVGDIESAMKILKGILEDGHVSPTSRIYYRLIRSMVK 335
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRA 379
G F+ A + +E++ +P F ++ LV GLV K++EAK V+ +KK+ + +
Sbjct: 336 EGEFEMALETCRETIKRRWVPPFEAMEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDS 395
Query: 380 WKKVEEELGL 389
W+K+E L L
Sbjct: 396 WRKIEAALPL 405
>gi|242054647|ref|XP_002456469.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
gi|241928444|gb|EES01589.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
Length = 392
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 149/282 (52%), Gaps = 8/282 (2%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+GQA + A+ TF +P S S NAL+FAC S + + +F P + + P
Sbjct: 116 FGQANLLPDAISTFQS-----SP-STRSLNALIFACIVSGNHTEAARVFQTFPDAHGVKP 169
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ ++KS +SG+ + +EM KG++ T+TT L YK+ ++ ++
Sbjct: 170 NTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNATTFTTALAGFYKEERFDDVGKVL 229
Query: 227 SEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
M+K G + YNVR+ + G + L+DEM G KP ++YN L+ +CK
Sbjct: 230 ELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMVKKGTKPSWVTYNHLIYGFCKE 289
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
++EAK++Y+ + G + + I++LC +FD A V+ E + +P F+T+
Sbjct: 290 GDLEEAKRLYKEMGRKGLVGDINFYFMLIHYLCKGDDFDTALGVYNEIAAKNWVPCFSTM 349
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
K+LV GL +I EAKG+I +K+KFP WK+VEE L
Sbjct: 350 KMLVNGLAGSSRIDEAKGIIEKMKEKFPDKT-EGWKEVEEAL 390
>gi|357131125|ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 457
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 182/349 (52%), Gaps = 9/349 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
L E DP+K + + + S A ++ V RLA R IETL+ + K +
Sbjct: 76 LLRERDPEKLVSDFVAASSASARFRDRHRVYEVAVSRLASFGRQDSIETLLGAQKRFLET 135
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
++E + LI YG+A M A TF ++ + ++FNA+L A +R++ +D +
Sbjct: 136 SKEGFATRLIGLYGRAAMPAQAAATFHELP--AQLKCTMTFNAVLTAYSRAKEFDALATA 193
Query: 155 FDEIPKKYNLS-PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
F EIP + L P SY +L+ + C + AL ++ ME GV +++ T+LN
Sbjct: 194 FQEIPASHPLVVPSVYSYNILISALCQKPALSAALNVVTLMEKCGVLPDNISFNTLLNGF 253
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
K G ++AE +W M+++ ++ D +YN ++ G E +++ M G KPDT
Sbjct: 254 SKNGRVDDAEAVWEMMKERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPDT 313
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA----YK 328
+SYN L+ YC +++AKK+Y+GL +N C+PN T+ T + L +G D A ++
Sbjct: 314 VSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNKGTYETLLPRLLQAGELDCALRYCHE 373
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+F ++ ++ D + ++ +V LV+ ++ EA ++ +KK+ P L
Sbjct: 374 LFSSNIKSCRV-DCSLLQDVVTTLVEASRVDEAAKIVELGRKKYYPRKL 421
>gi|326528779|dbj|BAJ97411.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534194|dbj|BAJ89447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 153/282 (54%), Gaps = 8/282 (2%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+GQAG+ A+ TF +P S S NALLFAC + + + +F P + + P
Sbjct: 114 FGQAGLLPDAISTFQS-----SP-STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKP 167
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ ++KS +SG++ + +EM +GV+ T T+T + YK+ ++ E++
Sbjct: 168 NAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVI 227
Query: 227 SEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
M+K G + YN R+ G K L+ EM G KP ++YN L+ +CK
Sbjct: 228 KLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPSWVTYNHLIYGFCKE 287
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
++E K++Y+ + G ++ + T I+HLC +G+FD A V+ E + IP F+T+
Sbjct: 288 GDLEEVKRLYKEMGMKGLVGDSNFYFTVIFHLCKAGDFDTALSVYNEIAPRNWIPCFSTM 347
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
K+LV GL +I EAKG+I +K+KF P+ WK+VEE L
Sbjct: 348 KMLVNGLAGSSRIDEAKGIIEKMKEKF-PDRDAGWKEVEEAL 388
>gi|242041671|ref|XP_002468230.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
gi|241922084|gb|EER95228.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
Length = 396
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 172/343 (50%), Gaps = 12/343 (3%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE 97
E +PDK + + + S S + ++ V RLA R I +I+S K K +
Sbjct: 10 ERNPDKLVSRFIAKSTASESFRNEHRVYEVAVARLASFGRHDAIAAIIDSQKPFIKASSV 69
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+ LIR G+A M HA F + +S+++FNALL + +D + I F +
Sbjct: 70 GFAARLIRLCGRASMPSHAAAIFHDLPP--KHKSIMTFNALLATYVDASDFDALAIAFQQ 127
Query: 158 IPKKY-NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
I + + P SY +L+ + C AL+++ ME +GV + + VLN Y+
Sbjct: 128 ILASHPTIVPTVYSYSILISALCQKRELSAALDVITLMEKRGVSPDNIFFNIVLNGFYRN 187
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISY 275
+ ++AE++W M+++ ++ D YN ++ G E LI+ M+ G KPD++SY
Sbjct: 188 DSFDDAEKVWEIMKERNIEPDAKCYNAKLRGLISQGRVEDAVALIERMQKEGPKPDSVSY 247
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA----YKVFK 331
N L+ YCK +++AKKVY+ L +N C+PN TF T + H + D A +++F+
Sbjct: 248 NELIRGYCKEGRLNQAKKVYDDLIKNECAPNRGTFHTLVPHFVEARELDCALSCCHEIFR 307
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
V + ++ +V L+ +++EA+ +++ + + P
Sbjct: 308 RKCRVQ----CSLLQGVVTALIAASRMEEARRIVQLGRTSYYP 346
>gi|413952228|gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]
Length = 453
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 180/369 (48%), Gaps = 15/369 (4%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE 97
E DPDK + + + S + D+ V RLA R I +I+S K +
Sbjct: 63 ERDPDKLVSQFIAESTASERFRNKHRVYDVAVARLASFGRHDGIAAIIDSQKPFIAASSV 122
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+ LIR G+A M HA F + +S ++FNALL A + +D + E
Sbjct: 123 GFAARLIRLCGRASMPSHAAAIFHDLPP--KHKSSMTFNALLAAYLDASDFDALATALQE 180
Query: 158 IPKKY-NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
IP + ++P S+ +L+ + C A++++ ME +G+ +++ +LN Y
Sbjct: 181 IPATHPTIAPTIYSHNILISALCKKPDLSAAVDVITLMEKRGITPDIISFNILLNGFYSN 240
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISY 275
++ E++W M+++ V+ D +YN ++ G E LI+ M+ G KPD++SY
Sbjct: 241 DRFDDVEKVWEMMKERNVEPDARSYNAKLRGLVSQGRVEDAAALIERMQKEGPKPDSVSY 300
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA----YKVFK 331
N L+ YC ++EAKKVY+ + +NG +PN TF T + H +G D A +++F
Sbjct: 301 NELIRGYCNEGRLNEAKKVYDNMIKNGYAPNRGTFHTLVPHFVEAGELDHALSCCHEIFT 360
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELGL- 389
V + ++ +V L +++EAK ++ ++ +P LR + ++ GL
Sbjct: 361 RKCRVQ----CSLLQGVVTALFAASRVEEAKRIVHLGRENYYPRKGLRMPPRTRKDEGLK 416
Query: 390 VPAPAVGDG 398
+P P G+G
Sbjct: 417 MPQPG-GEG 424
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 164/355 (46%), Gaps = 47/355 (13%)
Query: 40 DPDKALDIYSSVS----KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKIT 95
DP +AL ++ + KH+ SS + +LA+S+RF +ET++ +N
Sbjct: 61 DPCEALALFENYHEKGFKHHYPSYSS------LIYKLARSRRFEAVETILGHLRNRNIRC 114
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
E LI+ YG+A + + + F QM R++ SFN LL + K +F
Sbjct: 115 NETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIF 174
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN---- 211
+ + + P+ +SY +++K G ++A L +EM KGV+ + VTY + L
Sbjct: 175 QQ-AYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCR 233
Query: 212 --------CLYKQ-----------------------GNAEEAERLWSEMEKKGVDLDVAA 240
CL+K G +EA++L +ME G L
Sbjct: 234 KGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVN 293
Query: 241 YNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
Y V +T+ G+ + ++ L++EM+ LKPD ++YN L+ CK + +A KV ++
Sbjct: 294 YGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQ 353
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
GC PNA T+R I C +G+FD A K+ +M P T LV GL+K
Sbjct: 354 VGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLK 408
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ F+ E G S+++L++ RSR ++ V + + + N+ ++ + L+
Sbjct: 65 ALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNR-NIRCNETLFVALI 123
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ + + +K +EL ++M + T ++ +LN L VD
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTL--------------------VD 163
Query: 236 LDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
D + + E+ + + +P+++SYN ++ + K ++A ++
Sbjct: 164 CDQFS--------------KASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWEQACNLF 209
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+ + E G P+ T+ +++ LC G D A +FK P+ T LL+EG
Sbjct: 210 DEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFI 269
Query: 356 KKIKEAKGVI 365
K KEAK ++
Sbjct: 270 GKYKEAKKLM 279
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
L+ G+ G D ++M + V+++N L+ + C ++ D +L +
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVK--MQV 354
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK-QGNAE 220
P+ +Y +++ +C++G D A+++LN M G T+ +++ L K + N +
Sbjct: 355 GGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDD 414
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE---RLKELI 260
+ EMEK+ + D + + I + G E L +LI
Sbjct: 415 YVCFVLEEMEKRQLRFDAETWRILIMDVCGQHVEIGSHLNDLI 457
>gi|115440379|ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|20804913|dbj|BAB92593.1| drought-inducible protein 1OS [Oryza sativa Japonica Group]
gi|37179506|gb|AAN05726.2| drought-inducible protein 1OS [Oryza sativa Indica Group]
gi|113534000|dbj|BAF06383.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|125527974|gb|EAY76088.1| hypothetical protein OsI_04014 [Oryza sativa Indica Group]
gi|125572269|gb|EAZ13784.1| hypothetical protein OsJ_03709 [Oryza sativa Japonica Group]
gi|215704731|dbj|BAG94759.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717015|dbj|BAG95378.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 434
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 4/333 (1%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
L E DPDK + + + S + + D+ V RLA R +E +I++ K +
Sbjct: 67 LLRERDPDKLVSGFIAASSTHPRFRARHRVYDVAVSRLATFGRLDGVEAIIDAQKPFLET 126
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
++E + LIR YG A M HA TF + +S ++FN+LL A + ++ +
Sbjct: 127 SKEGFAARLIRLYGHASMASHAAATFHDLPP--QLKSTMTFNSLLAAYVEAGEFEALAAA 184
Query: 155 FDEIP-KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
F EIP ++ P SY +LL++ C AL+ + ME G+ VT+ T+LN
Sbjct: 185 FKEIPVSNPSVVPSVYSYNILLQALCKVPDLSAALDTMTLMEKSGISPDLVTFNTLLNGF 244
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
Y G+ + AE++W + ++ + D YN ++ G E ++++M G KPDT
Sbjct: 245 YNHGDMDGAEKVWEMITERNMVPDAKNYNAKLRGLVAQGRIEDAVAVVEKMEKDGPKPDT 304
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
ISYN L+ YCK+ ++EAKK++E + ENG N T+ T I L +G D A K E
Sbjct: 305 ISYNELIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDYALKCCHE 364
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ D ++ +V LV ++++A ++
Sbjct: 365 IYGKNLRVDCFVLQEVVTALVTASRVEDATKIV 397
>gi|125526857|gb|EAY74971.1| hypothetical protein OsI_02869 [Oryza sativa Indica Group]
Length = 378
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 164/333 (49%), Gaps = 29/333 (8%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R LA++ R +DI+ + H + + + G+ D R + +
Sbjct: 37 LRSLARAGRLADIDAALAPHLASHSVAA-------VSALSSVGLPD---RASALLATIRN 86
Query: 129 PRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P + NALL R RL +P L P ++ D + G+ K+ C + +D A
Sbjct: 87 P-TAAHLNALLAPLLRRHRLVGLIPTLLAAHP---SVPRDDATEGIHAKALCIATGADSA 142
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRIT 246
L LL + + + +T+V++ YKQ AE+LW EM E G+ D AA+NVRIT
Sbjct: 143 LHLL---QRESPPPSLQLFTSVIDSYYKQRKPHRAEQLWREMVEDHGIVPDAAAHNVRIT 199
Query: 247 -NTYGGDPERLKELIDEMR-DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G E +KELI MR DAGL+PD +S+N LM ++ +DE +VY+ LE+ S
Sbjct: 200 YKAATGTVEEVKELIRAMREDAGLQPDIVSHNGLMRAMARHGRVDEMMEVYKRLEKGSAS 259
Query: 305 --------PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
P+ T+ + LC +G + +A VF E+V K+ D T ++LV GL +
Sbjct: 260 AAAEGKSAPDCATYTCVVAALCKAGRWSEADDVFYEAVKRRKLADLGTARVLVRGLKEAG 319
Query: 357 KIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
K + A+ V+ ++KKFP WK +EE G+
Sbjct: 320 KGRAARRVVIGLRKKFPDRFDGPWKDLEELAGI 352
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 186/386 (48%), Gaps = 44/386 (11%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVS----SRYAQDLTVRRLAKSKR 77
T IS + S LR + DP AL ++ + + + P S + DL + +L ++K
Sbjct: 71 TQKPISPFRLSSLLRLQKDPTLALQLFLNPNPSSSEPPKPFRYSLLSYDLIISKLGRAKM 130
Query: 78 FSDIETLIESHKNDPKIT-QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
F ++E +++ K + + E CN+I YG+A + D A + F+++ R+V S N
Sbjct: 131 FDEMEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVN 190
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+LL A ++R +K+ +F +I Y SPD ++ +L+ + C G D + +EM+
Sbjct: 191 SLLAALLKNRQLEKMTQVFVDI-SNYG-SPDACTFNILIHAACLCGDLDAVWGVFDEMQK 248
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK---------------KG-------- 233
+GV+ VT+ T++ L +EA RL +M K KG
Sbjct: 249 RGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELN 308
Query: 234 -------------VDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
V L A Y+ I+ + G E + +++ EM + G KPDT++YN ++
Sbjct: 309 FAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAII 368
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+CK ++ A +V + + E GC P+ +F T I LC G DKA + ++
Sbjct: 369 NGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCP 428
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD + +++ +GL + ++KEA ++
Sbjct: 429 PDVLSYRIIFDGLCEMMQLKEATSIL 454
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 55/334 (16%)
Query: 41 PDKALDIYSSV----SKHYASPVSSRYAQDLTVRRLAK-SKRFSDIETLIESHKNDPKIT 95
PD+A ++ + K V+S A L R+L K ++ F DI
Sbjct: 167 PDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNY----------- 215
Query: 96 QEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
P C LI + G D FD+M + G +V++F L++ + + +
Sbjct: 216 GSPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEAL 275
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L +++ K Y + P+ Y L+K C G + A +L EM V++ + Y+T+++
Sbjct: 276 RLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISA 335
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPD 271
L+K G EE + EM + G D YN I + D E ++DEM + G KPD
Sbjct: 336 LFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPD 395
Query: 272 T-----------------------------------ISYNFLMTCYCKNEMMDEAKKVYE 296
+SY + C+ + EA + +
Sbjct: 396 VFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILD 455
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ G P + + LC N + + +
Sbjct: 456 EMIFKGYVPRNESINKLVDRLCQECNMELLWMIL 489
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
+I + + + A R D+M E G V SFN ++ + C +L DK L +++P++
Sbjct: 367 IINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKL-DKAMDLLEDMPRR 425
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +SY ++ C+ +A +L+EM KG + +++ L ++ N
Sbjct: 426 -GCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYVPRNESINKLVDRLCQECN--- 481
Query: 222 AERLWSEMEKKG 233
E LW + G
Sbjct: 482 MELLWMILNSLG 493
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 163/355 (45%), Gaps = 47/355 (13%)
Query: 40 DPDKALDIYSSVS----KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKIT 95
DP +AL ++ + KH+ SS + +LA+S+RF +ET++ +N
Sbjct: 61 DPCEALALFENYHEKGFKHHYPSYSS------LIYKLARSRRFEAVETILGHLRNRNIRC 114
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
E LI+ YG+A + + + F QM R++ SFN LL + K +F
Sbjct: 115 NETLFVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIF 174
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN---- 211
+ + P+ +SY +++K G ++A L +EM KGV+ + VTY + L
Sbjct: 175 QQ-AYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCR 233
Query: 212 --------CLYKQ-----------------------GNAEEAERLWSEMEKKGVDLDVAA 240
CL+K G +EA++L +ME G L
Sbjct: 234 KGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVN 293
Query: 241 YNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
Y V +T+ G+ + ++ L++EM+ LKPD ++YN L+ CK + +A KV ++
Sbjct: 294 YGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQ 353
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
GC PNA T+R I C +G+FD A K+ +M P T LV GL+K
Sbjct: 354 VGGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLK 408
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ F+ E G S+++L++ RSR ++ V + + + N+ ++ + L+
Sbjct: 65 ALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNR-NIRCNETLFVALI 123
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ + + +K +EL ++M + T ++ +LN L VD
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTL--------------------VD 163
Query: 236 LDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
D + + E+ + + G +P+++SYN ++ + K ++A ++
Sbjct: 164 CDQFS--------------KASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWEQACNLF 209
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+ + E G P+ T+ + + LC G D A +FK P+ T LL+EG
Sbjct: 210 DEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLMEGWCFI 269
Query: 356 KKIKEAKGVI 365
K KEAK ++
Sbjct: 270 GKYKEAKKLM 279
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
L+ G+ G D ++M + V+++N L+ + C ++ D +L +
Sbjct: 297 LMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVK--MQV 354
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK-QGNAE 220
P+ +Y +++ +C++G D A+++LN M G T+ +++ L K + N +
Sbjct: 355 GGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDD 414
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
+ EMEK+ + D + + I + G E
Sbjct: 415 YVCFVLEEMEKRQLRFDAETWRILIMDVCGQHVE 448
>gi|224078640|ref|XP_002305587.1| predicted protein [Populus trichocarpa]
gi|222848551|gb|EEE86098.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 183/377 (48%), Gaps = 53/377 (14%)
Query: 19 SSTTASSISVSK-AKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
S++ SSIS ++ A S+L++E +P+K L+I S S + + R + + +LAKS
Sbjct: 26 STSPLSSISKTRVALSRLKTETNPEKILEICRSASLTPEANI-DRITFSVAIDKLAKSNN 84
Query: 78 FSDI-ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS-- 134
FS I E L E + P + E + + I +G+AGM DHA+R F + E V+S
Sbjct: 85 FSYIDELLTELRTSRPDLRTEQFAAHSIVLFGKAGMIDHAIRLFKEYHEKNQNGVVLSSG 144
Query: 135 ----FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
N+LL++C ++ Y++V +F + K + + P+ +Y ++++ + GSS +
Sbjct: 145 SVKLLNSLLYSCILAKKYNEVKRVFVDFTKSFKIEPNLDTYNTIIQAFSEGGSSSSCYSI 204
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
LNEM+ KGV+ T T ++ YK+ E+ ++ ME+
Sbjct: 205 LNEMDKKGVKPNTTTIGNLITGFYKEEKYEDVGKVLKMMEE------------------- 245
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
D G K YN + CK + EA+ + G G P A T+
Sbjct: 246 --------------DYGTKAGIDIYNIRIRSLCKLKRSKEAEALLGGCIARGVKPKAVTY 291
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
R +F+ AY++ KES+ +P+ +T+K+LVEGL +++AK +I IK+
Sbjct: 292 R----------DFESAYRICKESMEKKLVPNSSTMKMLVEGLASSGNVEKAKELIGEIKE 341
Query: 371 KFPPNVLRAWKKVEEEL 387
KF NV W +VE L
Sbjct: 342 KFSKNV-ELWNEVEAGL 357
>gi|222618857|gb|EEE54989.1| hypothetical protein OsJ_02613 [Oryza sativa Japonica Group]
Length = 641
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 165/334 (49%), Gaps = 29/334 (8%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R LA++ R +DI+ + H + L ++ G+ D R + +
Sbjct: 37 LRSLARAGRLADIDAALAPHLASHSVAAVSALSSV-------GLPD---RASALLATIRN 86
Query: 129 PRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P + NALL R RL +P L P ++ D + G+ K+ C + +D A
Sbjct: 87 P-TAAHLNALLAPLLRRHRLVGLIPTLLAAHP---SVPRDDATEGIHAKALCIATGADSA 142
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRIT 246
L LL + + + +T+V++ YKQ AE+LW EM E G+ D AA+NVRIT
Sbjct: 143 LHLL---QRESPPPSLQLFTSVIDSYYKQRKPHRAEQLWREMVEDHGIVPDAAAHNVRIT 199
Query: 247 -NTYGGDPERLKELIDEMR-DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G E +KELI MR DAGL+PD +S+N LM ++ +DE +VY+ LE+ S
Sbjct: 200 YKAATGTVEEVKELIRAMREDAGLQPDIVSHNGLMRAMARHGRVDEMMEVYKRLEKGSAS 259
Query: 305 --------PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
P+ T+ + LC +G + +A VF E+V K+ D T ++LV GL +
Sbjct: 260 AAAEGKSAPDCATYTCVVAALCKAGRWSEADDVFYEAVKRRKLADLGTARVLVRGLKEAG 319
Query: 357 KIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLV 390
K + A+ V+ ++KKFP WK +EE G+
Sbjct: 320 KGRAARRVVIGLRKKFPDRFDGPWKDLEELAGIA 353
>gi|115438598|ref|NP_001043579.1| Os01g0616600 [Oryza sativa Japonica Group]
gi|13365572|dbj|BAB39117.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113533110|dbj|BAF05493.1| Os01g0616600 [Oryza sativa Japonica Group]
Length = 378
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 164/333 (49%), Gaps = 29/333 (8%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R LA++ R +DI+ + H + + + G+ D R + +
Sbjct: 37 LRSLARAGRLADIDAALAPHLASHSVAA-------VSALSSVGLPD---RASALLATIRN 86
Query: 129 PRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P + NALL R RL +P L P ++ D + G+ K+ C + +D A
Sbjct: 87 P-TAAHLNALLAPLLRRHRLVGLIPTLLAAHP---SVPRDDATEGIHAKALCIATGADSA 142
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRIT 246
L LL + + + +T+V++ YKQ AE+LW EM E G+ D AA+NVRIT
Sbjct: 143 LHLL---QRESPPPSLQLFTSVIDSYYKQRKPHRAEQLWREMVEDHGIVPDAAAHNVRIT 199
Query: 247 -NTYGGDPERLKELIDEMR-DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G E +KELI MR DAGL+PD +S+N LM ++ +DE +VY+ LE+ S
Sbjct: 200 YKAATGTVEEVKELIRAMREDAGLQPDIVSHNGLMRAMARHGRVDEMMEVYKRLEKGSAS 259
Query: 305 --------PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
P+ T+ + LC +G + +A VF E+V K+ D T ++LV GL +
Sbjct: 260 AAAEGKSAPDCATYTCVVAALCKAGRWSEADDVFYEAVKRRKLADLGTARVLVRGLKEAG 319
Query: 357 KIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
K + A+ V+ ++KKFP WK +EE G+
Sbjct: 320 KGRAARRVVIGLRKKFPDRFDGPWKDLEELAGI 352
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 177/355 (49%), Gaps = 5/355 (1%)
Query: 20 STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFS 79
++ S+S + L+SE +P AL I+ SV++ + + Y ++RL K +
Sbjct: 2 ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTR-FPGYSHTPYVFHHILKRLFDPKLVA 60
Query: 80 DIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISFNAL 138
+ ++E + E +I++Y + M D A+ F +M E+ G + S+N+L
Sbjct: 61 HVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 120
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A S +D+ F + LSP+ +Y +L+K C DKA ELLN M +G
Sbjct: 121 LNALIESNKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG 179
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLK 257
+Y T++N L K G +A +L+ EM ++GV DVA YN+ I + GD
Sbjct: 180 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNAS 239
Query: 258 ELIDE-MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
E+ + ++ + P+ SYN ++ CK DE+ +++ +++N + T+ T I+
Sbjct: 240 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 299
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LCGSGN D A +V+KE PD ++ G ++ +I+E + + ++K+
Sbjct: 300 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 43/314 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y +AG + + + M++ G R+V+S+N L+ + D+ +++ +P+K
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEK- 388
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG----- 217
+ D ++YG+L+ C +G +KAL +L E EN ++ T Y++++N L ++G
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448
Query: 218 -------------------NA-----------EEAERLWSEMEKKGVDLDVAAYNVRITN 247
NA E+A R + M KG V YN I
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
ER E L+ EM G KP+ I+Y+ LM C+ + +D A ++ E G
Sbjct: 509 L--SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFK 566
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ I+ LC SG + A +++ E +P+ T L+EG K + + A +
Sbjct: 567 PDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKI 626
Query: 365 IRTIKKKFP-PNVL 377
I + P P+++
Sbjct: 627 WDHILQYGPQPDII 640
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 132/347 (38%), Gaps = 73/347 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-------SRLYDKV---P 152
LI S + G A++ FD+M E G V +N L+ + S +++++ P
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 153 ILFDEIP-------------------------KKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ IP KK D +Y L+ C SG+ D A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-- 245
+ EM GV V Y T+LN + G EE LW MEK+G V +YN+ I
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRG 368
Query: 246 -------------------------TNTYG---------GDPERLKELIDEMRDAGLKPD 271
+ TYG G + +++E + D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T +Y+ ++ C+ +DE V + + ++GC PN I + + A + F
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
V P T L+ GL K ++ EA +++ + K + PN++
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEPYLCN-LIRSYGQAGMFDHAMR 118
+A + L + R ++ +++ H P P++CN +I + +A + A+R
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPN----PHVCNAVINGFVRASKLEDALR 485
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
F M G +V+++N L+ +++ + + L E+ K P+ I+Y LL+
Sbjct: 486 FFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK-GWKPNMITYSLLMNGL 544
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C D AL L + KG + + +++ L G E+A +L+SEM+++ ++
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604
Query: 239 AAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+N + Y D ER ++ D + G +PD ISYN + C + +A
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLND 664
Query: 298 LEENGCSPNATTFRTWIYHLCGSG 321
+ G P A T+ + + +G
Sbjct: 665 AVDRGVLPTAITWNILVRAVLDNG 688
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 115/264 (43%), Gaps = 2/264 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G + A+ ++ + ++++++ R D+V + D++ K+
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM-TKH 458
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ + + AL M +KG T VTY T++N L K EA
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTC 281
L EM KG ++ Y++ + G + L + + G KPD +N ++
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + +++A ++Y +++ C PN T T + +F++A K++ + PD
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPD 638
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI 365
+ + ++GL +I +A G +
Sbjct: 639 IISYNITLKGLCSCHRISDAVGFL 662
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 177/355 (49%), Gaps = 5/355 (1%)
Query: 20 STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFS 79
++ S+S + L+SE +P AL I+ SV++ + + Y ++RL K +
Sbjct: 2 ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTR-FPGYSHTPYVFHHILKRLFDPKLVA 60
Query: 80 DIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISFNAL 138
+ ++E + E +I++Y + M D A+ F +M E+ G + S+N+L
Sbjct: 61 HVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 120
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A S +D+ F + LSP+ +Y +L+K C DKA ELLN M +G
Sbjct: 121 LNALIESNKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG 179
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLK 257
+Y T++N L K G +A +L+ EM ++GV DVA YN+ I + GD
Sbjct: 180 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNAS 239
Query: 258 ELIDE-MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
E+ + ++ + P+ SYN ++ CK DE+ +++ +++N + T+ T I+
Sbjct: 240 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 299
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LCGSGN D A +V+KE PD ++ G ++ +I+E + + ++K+
Sbjct: 300 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 354
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 50/316 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y +AG + + + M++ G R+V+S+N L+ + D+ +++ +P+K
Sbjct: 331 MLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEK- 388
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG----- 217
+ D ++YG+L+ C +G +KAL +L E EN ++ T Y++++N L ++G
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448
Query: 218 -------------------NA-----------EEAERLWSEMEKKGVDLDVAAYNVRITN 247
NA E+A R + M KG V YN I
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
ER E L+ EM G KP+ I+Y+ LM C+ + +D A ++ E G
Sbjct: 509 L--SKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFK 566
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ I+ LC SG + A +++ E +P+ T L+EG K + + A
Sbjct: 567 PDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERA--- 623
Query: 365 IRTIKKKFPPNVLRAW 380
K ++L++W
Sbjct: 624 -----SKIWDHILQSW 634
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 132/347 (38%), Gaps = 73/347 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-------SRLYDKV---P 152
LI S + G A++ FD+M E G V +N L+ + S +++++ P
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 249
Query: 153 ILFDEIP-------------------------KKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ IP KK D +Y L+ C SG+ D A
Sbjct: 250 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 309
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-- 245
+ EM GV V Y T+LN + G EE LW MEK+G V +YN+ I
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRG 368
Query: 246 -------------------------TNTYG---------GDPERLKELIDEMRDAGLKPD 271
+ TYG G + +++E + D
Sbjct: 369 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 428
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T +Y+ ++ C+ +DE V + + ++GC PN I + + A + F
Sbjct: 429 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFG 488
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
V P T L+ GL K ++ EA +++ + K + PN++
Sbjct: 489 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMI 535
>gi|357131120|ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Brachypodium distachyon]
Length = 463
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 171/349 (48%), Gaps = 19/349 (5%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
L E DP+K + + + S A ++ V RLA R IET++ + K +
Sbjct: 83 LLRERDPEKLVSDFVAASSASARFRDRHRVYEMAVSRLASLGRQDSIETILGAQKRFLET 142
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
++E + LI YG+A M A TF ++ + ++ NA+L A +++ +D +
Sbjct: 143 SKEGFATRLIGLYGRAAMPAQASATFHELP--AQLKCTMTLNAVLTAYYQAKEFDALATA 200
Query: 155 FDEIPKKYNLS-PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
F EI + L P SY +L+++ C AL ++ ME GV +++ T+LN
Sbjct: 201 FQEISVSHPLVVPSVYSYNILIRALCQKHDLSAALNVITLMEKCGVLPDNISFNTLLNGF 260
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
Y+ G ++AE +W M+ ++ D +YN ++ G E +++ M G KPDT
Sbjct: 261 YQNGRMDDAEAVWEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPDT 320
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+SYN L+ YC +++AKK+Y+GL +N C+PN T+ T + L +G D A +
Sbjct: 321 VSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNRGTYETLLPRLLQAGELDCAVR---- 376
Query: 333 SVMVHKIPDFNT---------VKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
H + NT ++ +V LV+ ++ EA ++ +KK+
Sbjct: 377 --YCHGLLSPNTKNCRVDRSLLQDVVTTLVEASRVDEAAKIVELGRKKY 423
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%)
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P SYN L+ C+ + A V +E+ G P+ +F T + +G D A V
Sbjct: 213 PSVYSYNILIRALCQKHDLSAALNVITLMEKCGVLPDNISFNTLLNGFYQNGRMDDAEAV 272
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
++ + PD + + GLV + +I++A V+ ++K+ P
Sbjct: 273 WEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGP 316
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 168/349 (48%), Gaps = 7/349 (2%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
++ ++ + S+ D A++I+ S+ S L + +L ++++F +E LI
Sbjct: 98 LTPARVHKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTL-ICKLGRARQFKTMEGLI 156
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS 145
+ + D ++I YG+ GM + A++ F QM E G FN LL
Sbjct: 157 QQMRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEH 216
Query: 146 RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
+ + LF ++ ++ +SP+ +Y +L+++HC S A L N+M +G T
Sbjct: 217 KCLETALSLFKKL-HEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVET 275
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDE 262
Y+ ++ L ++ + A + EM KG D YN + + L+E L+ +
Sbjct: 276 YSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSL--CRKMNLREAYRLLSK 333
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M+ G PD I+YN ++T +C+ +A ++ + ENGC PNA ++RT + LC G
Sbjct: 334 MKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGK 393
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
FD+A +E + IP + LL+ GL + K+ EA V+ + K+
Sbjct: 394 FDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQ 442
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A R +M +G VI++N ++ C R D IL D +P+ L P+ +SY L
Sbjct: 327 AYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRD-MPENGCL-PNALSYRTL 384
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C+ G D+A + + EM + G Y ++ L +G EA + M K+ +
Sbjct: 385 VNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTL 444
Query: 235 DLDVAAYNVRITNTYGGDPERLKELIDEMRD 265
+ ++V + +EL+D++ +
Sbjct: 445 APHESTWSVLLMRICEDSQTEARELVDKLSE 475
>gi|227463008|gb|ACP39956.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463010|gb|ACP39957.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 337
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 166/316 (52%), Gaps = 9/316 (2%)
Query: 6 HIRRLCTATTAAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSS--R 62
H+RR + +A S T S+ ++A L+SE +PD+ L+I + S +P R
Sbjct: 17 HLRRF--SILSADSPTPLSAHQKTRAALCLLKSEQNPDRILNICRAAS---LTPTFHLDR 71
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
A + + +L++ F I+T + + P + E ++ + + YGQA M +HA+ TFD+
Sbjct: 72 IAFSVAISKLSEGNHFQSIDTFLRELNSRPDLQHERFVSHSLILYGQAKMLNHALTTFDE 131
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
G RS S NALL A ++ Y + +F E PK+Y + P+ +Y +K+ C+SG
Sbjct: 132 FYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEFPKRYGIEPNLETYNTAIKALCESG 191
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
SS +L +M++KG++ T+ T+L Y + E+ ++ + M++ GV + V+ YN
Sbjct: 192 SSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEKYEDVGKVLNLMKEHGVSVGVSTYN 251
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+RI + K L+D M G+ P++ +YN L+ C+ + EAKKV++ +
Sbjct: 252 IRIRSLCMLKKSNEAKALLDGMLSKGIMPNSATYNHLIYGXCRGGNLGEAKKVFKNMVNK 311
Query: 302 GCSPNATTFRTWIYHL 317
G P + + T Y L
Sbjct: 312 GFEPESHCYFTLWYFL 327
>gi|242054627|ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
gi|241928434|gb|EES01579.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
Length = 429
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 165/345 (47%), Gaps = 28/345 (8%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE 97
E DPDK + + + S +R ++ V RLA R + L++S K + + E
Sbjct: 71 ERDPDKLVSQFIAASTASPRFRDNRRVYEVAVSRLASFGRRDAVAALLDSQKPFLEASNE 130
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP---RSVISFNALLFACTRSRLYDKVPIL 154
+ ++R YG+A M HA TF +G P +SV +FNALL A + +D + I
Sbjct: 131 DFTVRILRLYGRASMPSHAAATF-----VGLPPKHKSVAAFNALLAAYVDTGDFDSLAIA 185
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
DEIP P AL++++ M+ G+ V++ ++LN Y
Sbjct: 186 LDEIPGSQKAEPSA------------------ALDVISLMDKCGLTPDMVSFNSLLNGFY 227
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTI 273
G ++AE++W M+++ + + YN ++ G E +I M G KPD++
Sbjct: 228 NNGRFDKAEKIWEMMKERNLQPNAKTYNAKLRGLVAEGRMEDAAAVIQRMLKEGPKPDSV 287
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
SYN L+ YCK +DE+KKVY+ L +NG +PN TF T I L G D A +E
Sbjct: 288 SYNELIRGYCKEGRLDESKKVYDELVKNGYAPNKGTFETLIPCLVEVGELDLALNCCQEI 347
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
+ ++ +V LV +++EA+ +++ K +PP L
Sbjct: 348 FNRKCRVKCSLLQAVVTALVAASRVEEARRIVKLGWKNNYPPRHL 392
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 188/391 (48%), Gaps = 45/391 (11%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYA---QDLTVRRLAKSKRFSDIE 82
IS + S LR + DP AL ++ + + +P RY+ DL + +L ++K F ++E
Sbjct: 9 ISSFRLASLLRLQEDPKLALHLFQHPNSN-PNPKPFRYSLLCYDLMITKLGRAKMFHEME 67
Query: 83 TLIESHKNDPK-ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
++ K + + +EP CN+I YG+AG+ +A++ FD+M R++ S+N LL
Sbjct: 68 QILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFDEMPLYRCQRTIKSYNTLLNV 127
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+ +D + F I K ++ PD ++ ++++ C G D AL++L+EM+N+ +
Sbjct: 128 LMICKEFDVMREHFVNI--KRHVKPDGCTFNIMIRGLCSDGRVDDALKVLDEMKNRDLVP 185
Query: 202 TTVT------------------------------------YTTVLNCLYKQGNAEEAERL 225
VT Y T++ L G A RL
Sbjct: 186 NQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYATLIKGLCAVGELSFALRL 245
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
EME+ GV +D A Y+ I+ + G + + ++ EM G K DT++YN ++ +CK
Sbjct: 246 KEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELKGCKADTVTYNVMINGFCK 305
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++ + A K+ + + EN C P+ ++ + LC G + +A +F++ PD +
Sbjct: 306 DKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRRGCAPDVVS 365
Query: 345 VKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
+++ +GL + K+A ++ + K F P
Sbjct: 366 YRIVFDGLSDAMEFKDAAFILDEMVFKGFAP 396
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 38/265 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+IR G D A++ D+M + ++F L++ C +L + L D +
Sbjct: 158 MIRGLCSDGRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFK-LKDYMVNV 216
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ L P++ Y L+K C G AL L EME GV+V + Y+T+++ L+K G +E
Sbjct: 217 HGLCPNEYVYATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDE 276
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD--------------- 265
+ EME KG D YNV I D E +++DEM +
Sbjct: 277 VFGVLMEMELKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILG 336
Query: 266 --------------------AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G PD +SY + +A + + + G +P
Sbjct: 337 ELCKDGKWSEASDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAP 396
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVF 330
+++ +I LC +G+ D + V
Sbjct: 397 RSSSICKFINRLCQNGDEDLVWSVL 421
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 4/131 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + F+ A + D+M E VIS+N +L + + + LF+++P++
Sbjct: 299 MINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEASDLFEDMPRR- 357
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD +SY ++ D+ A +L+EM KG + + +N L + G +
Sbjct: 358 GCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINRLCQNG---DE 414
Query: 223 ERLWSEMEKKG 233
+ +WS + G
Sbjct: 415 DLVWSVLNCLG 425
>gi|357130504|ref|XP_003566888.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Brachypodium distachyon]
Length = 370
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 167/331 (50%), Gaps = 26/331 (7%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+RRLA++ R +D++ L+ P + P +I + G+ D R + + +
Sbjct: 36 IRRLARAGRLADVDALVA-----PLVPSHP--TAVISALSLVGLSD---RASAILSTIPS 85
Query: 129 PRSVISFNALLFACTRSRLYDK-VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P + NALL + R + K VP L D+ P ++ D + +L KS C + +D A
Sbjct: 86 P-TAAHLNALLGPLLQRRRHAKLVPDLLDKHP---SIPRDAATRCILAKSICITKGADDA 141
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRIT 246
L LL E + + YT +++ YK+ AE LW +M E G+ D AA+NVRIT
Sbjct: 142 LHLLAGDEPPSLHL----YTAIIDSYYKEKKPHRAEELWRDMVENHGIVPDAAAHNVRIT 197
Query: 247 -NTYGGDPERLKELIDEMRD-AGLKPDTISYNFLMTCYCKNEMMDEA----KKVYEGLEE 300
+ G E ++ELI MR+ AGLKPD ++Y+ L+ +++ +DEA K E EE
Sbjct: 198 YKSKKGTVEEVEELIRAMREEAGLKPDIVTYHALIQVLARHKRVDEAVELCKSFLEKEEE 257
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+ + T+ + LCG + +A +F E V K+ D TV LV GL + K +
Sbjct: 258 STVALKCRTYSYLVTMLCGEKRWSEAEDMFYEGVKRLKVADLGTVHKLVSGLKEAGKGRA 317
Query: 361 AKGVIRTIKKKFPPNVLRAWKKVEEELGLVP 391
A+ V+ ++KKFP WK +EE GL P
Sbjct: 318 ARRVVVGLRKKFPDQFDGPWKVLEEAAGLTP 348
>gi|242053623|ref|XP_002455957.1| hypothetical protein SORBIDRAFT_03g027940 [Sorghum bicolor]
gi|241927932|gb|EES01077.1| hypothetical protein SORBIDRAFT_03g027940 [Sorghum bicolor]
Length = 369
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 124/229 (54%), Gaps = 7/229 (3%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D + +L KS C + +D AL LL E + G + +T +++ YKQ AE LW
Sbjct: 116 DAATDSILAKSLCLTSGADSALHLLRE-PSSGSPPSLQLFTAIIDSFYKQRLPHRAEELW 174
Query: 227 SEM-EKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRD-AGLKPDTISYNFLMTCYC 283
M + G+ D AAYN RIT + G E +KELI MR+ AGL+PD +SYN LM
Sbjct: 175 RAMVQDHGIAPDTAAYNARITYKSANGTVEEVKELIRAMREEAGLRPDLVSYNALMRAMA 234
Query: 284 KNEMMDEAKKVY---EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
++ +DEA +VY E EE P+ T+ + LCG+G + +A VF V K+
Sbjct: 235 RHNRVDEAVEVYRRLEAGEEADVVPDCATYTCVVGALCGAGRWSEAEDVFYAGVKRRKVT 294
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
D TV++LV GL K + A+ V+ ++KKFP W+++EE GL
Sbjct: 295 DLGTVRVLVRGLKDAGKGRAARRVVVGLRKKFPEQFDGPWRELEEAAGL 343
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 179/340 (52%), Gaps = 7/340 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYL 100
D AL I+ K+ + + D + +L++++ F +E L+ HK+ K + ++
Sbjct: 75 DLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFI 134
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N+IR+YG AG D A+RTF ++ + RSV S N LL A +++ YD V +F
Sbjct: 135 -NVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRS 193
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
KY + P+ + +L+K+ C + A+++L+EM G+ VTYTT+L +G+
Sbjct: 194 KYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMV 253
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
A +++ E+ +G D Y + + N Y + RL + L+D+M + G++P+ ++Y
Sbjct: 254 NANKVFGELFDRGWLPDATTYTI-LMNGY-CEQGRLADAIKLMDDMGENGVEPNEVTYGV 311
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ YCK + EA+ + + + E P++ I LC +G ++A +++K + +
Sbjct: 312 MVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKN 371
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+PD + L+ L K+ K+ EA+ + ++ P++L
Sbjct: 372 CMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLL 411
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 155/375 (41%), Gaps = 57/375 (15%)
Query: 46 DIYSSVSKHYASPVSSRYA-------QDLTVRRLAKS-----------KRFSDIETLIES 87
+I+ +V ++Y +A QD V+R +S KR+ + + ++
Sbjct: 131 NIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKN 190
Query: 88 HKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
++ + + CN LI++ + + A++ D+M +G +V+++ +L +
Sbjct: 191 CRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRG 250
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+F E+ + L PD +Y +L+ +C+ G A++L+++M GVE VTY
Sbjct: 251 DMVNANKVFGELFDRGWL-PDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTY 309
Query: 207 TT-----------------------------------VLNCLYKQGNAEEAERLWSEMEK 231
V++ L + G EEA LW M K
Sbjct: 310 GVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLK 369
Query: 232 KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
K D A + I G ++L E + G P ++YN L+ C+ + E
Sbjct: 370 KNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSE 428
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A K+++ + E G PNA T+ I GN + ++ +E + +P+ +T +L+E
Sbjct: 429 AGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIE 488
Query: 351 GLVKKKKIKEAKGVI 365
L K E V+
Sbjct: 489 ELCKMGMEGEVDKVV 503
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G A + F + + P S++++N L+ C + L + + D + K
Sbjct: 382 LIHWLCKEGKVWEARKLFGEFERGAIP-SLLTYNTLIAGMCEKGELSEAGKLWDDMMEKG 440
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ +Y +L+K G++ + + +L EM + TY ++ L K G E
Sbjct: 441 Y--KPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGE 498
Query: 222 AERLWS-EMEKKGVDLD 237
+++ S M GVD D
Sbjct: 499 VDKVVSMAMASGGVDSD 515
>gi|115440435|ref|NP_001044497.1| Os01g0793200 [Oryza sativa Japonica Group]
gi|113534028|dbj|BAF06411.1| Os01g0793200, partial [Oryza sativa Japonica Group]
Length = 235
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 131/234 (55%), Gaps = 2/234 (0%)
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F P Y++ P+ ++ ++KS +SG++ +L+EM KGV+ T+TT + Y
Sbjct: 1 FQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFY 60
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTI 273
K+ ++ ++ M+K G + +NVR+ G K L++EM G KP +
Sbjct: 61 KEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWL 120
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN L+ +CK ++EAK++Y+ + + G +++ + IY+LC G+FD A V+ E
Sbjct: 121 TYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEI 180
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
+ +P F+T+K+LV GL ++ EAKG+I +K+KFP WK+VE+ L
Sbjct: 181 AARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKMKEKFPDKA-EGWKEVEDAL 233
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 167/345 (48%), Gaps = 13/345 (3%)
Query: 20 STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTV----RRLAKS 75
S+ +IS + LR DP KAL + + S Y L + R L +
Sbjct: 70 SSLLITISKTTVLRTLRLIKDPSKALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVA 129
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+ F IE H ++ + +LIRSY +AG+F +M+ F M + SV++F
Sbjct: 130 RNFL---FSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTF 186
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
N+L+ + + ++DE+ Y +SPD +Y +L++ C + D+ EME
Sbjct: 187 NSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREME 246
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK--GVDLDVAAYNVRITN-TYGGD 252
+ + VTY T+++ L + G A L + M KK G++ +V Y I +
Sbjct: 247 SFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQE 306
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE-ENGCSPNATTFR 311
E +++EM GLKP+ I+YN L+ C+ +D+ K V E ++ + G SP+ TF
Sbjct: 307 VEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFN 366
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIP-DFNTVKLLVEGLVKK 355
T I+ C +GN D+A KVF ES+ +IP D + L+ L +K
Sbjct: 367 TIIHLHCCAGNLDEALKVF-ESMKKFRIPADSASYSTLIRSLCQK 410
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 126/286 (44%), Gaps = 30/286 (10%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y + A+ ++M G ++I++N L+ + DK+ + + +
Sbjct: 297 LIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDG 356
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD ++ ++ HC +G+ D+AL++ M+ + + +Y+T++ L ++G+ + A
Sbjct: 357 GFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMA 416
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E+L+ E+ +K + L G KP SYN +
Sbjct: 417 EQLFDELFEKEILLS---------------------------KFGSKPLAASYNPIFESL 449
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C++ +A++V L + G + + ++ T I C G ++ Y++ + +PD
Sbjct: 450 CEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDI 508
Query: 343 NTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKKVEEEL 387
L++G ++K K AK + + +K + P W V +L
Sbjct: 509 EIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKT-STWHSVLAKL 553
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK--KG-VDLDVAAYN 242
KAL + KG T +Y +L L ++ N A +EK KG V L+ +N
Sbjct: 93 KALRFFKWTQQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFN 152
Query: 243 --VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLE 299
+R G E +K L M+ + P +++N LM+ K + AK+VY E L
Sbjct: 153 SLIRSYAEAGLFKESMK-LFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLG 211
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
G SP+ T+ I C + D+ ++ F+E + D T LV+GL + K++
Sbjct: 212 TYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVR 271
Query: 360 EAKGVIRTIKKK---FPPNVL 377
A+ ++ + KK PNV+
Sbjct: 272 IARNLVNGMGKKCEGLNPNVV 292
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 105/261 (40%), Gaps = 44/261 (16%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELG 127
V+ L ++ + ++ ++E K+D + + + N +I + AG D A++ F+ M
Sbjct: 333 VKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESM---- 388
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
KK+ + D SY L++S C G D A
Sbjct: 389 --------------------------------KKFRIPADSASYSTLIRSLCQKGDYDMA 416
Query: 188 LELLNEMENK-------GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+L +E+ K G + +Y + L + G ++AER+ ++ K+G +
Sbjct: 417 EQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSY 476
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
V + + G E EL+ M PD Y++L+ + + + AK+ E + +
Sbjct: 477 TTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLK 536
Query: 301 NGCSPNATTFRTWIYHLCGSG 321
+ P +T+ + + L G
Sbjct: 537 SSYQPKTSTWHSVLAKLLEKG 557
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 141/271 (52%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYDKVPILFDEIPKK 161
LI Y G D A++ + M + G +V ++N L+ A +R D +L E +K
Sbjct: 225 LIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVL--EEMQK 282
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD +Y +L+ +C G+ KALE+ EM KGV T VTYT+++ ++G +E
Sbjct: 283 NGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQE 342
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+RL++ KKG+ DV YN I ++ GGD ER E++ EM + PD ++YN LM
Sbjct: 343 TDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMR 402
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C +DEA+ + + + + G P+ ++ T I G+ A +V E + P
Sbjct: 403 GFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNP 462
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++GL K ++ +A+ +++ + K
Sbjct: 463 TLMTYNALIQGLCKIRQGDDAENLMKEMVAK 493
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 4/262 (1%)
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
+R + + ++ P +V + C R R+ + ++ E+ ++ ++PDK +Y L+
Sbjct: 133 VRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVM-REMRERGGIAPDKYTYATLIS 191
Query: 177 SHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G + A+++ +EM KG V + V Y ++ G + A + +M ++G+
Sbjct: 192 GWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIA 251
Query: 236 LDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ VA YN+ + + +++EM+ G PD +YN L+ YCK +A +V
Sbjct: 252 MTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+E + + G A T+ + IY G + ++F +V PD L+
Sbjct: 312 FEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCT 371
Query: 355 KKKIKEAKGVIRTI-KKKFPPN 375
++ A ++ + KK+ PP+
Sbjct: 372 GGDMERAYEIMAEMEKKRIPPD 393
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 173/359 (48%), Gaps = 13/359 (3%)
Query: 14 TTAAGSSTTASSISVSKAK--SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRR 71
+T SS + S S+SK LR P KA + ++ S++ + S Y L +
Sbjct: 11 STELESSLFSLSPSISKTTFFQVLRFIASPPKAFEFFNWASRNGFAHDSRSYFMMLDI-- 68
Query: 72 LAKSKRFSDIETLIES--HKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGT 128
L ++ + + S +++ + E CN L+RSYG AG+F+ A++ F M G
Sbjct: 69 LGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGV 128
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
SVI+FN+LL + + +FDE+ Y ++PD ++ +L++ C + D+
Sbjct: 129 SPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGF 188
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRIT 246
EM E VTY T+++ L + G A + M KK DL DV Y +
Sbjct: 189 RFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTT-LV 247
Query: 247 NTYGGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG-LEENGC 303
Y E + L+ +EM GLKP+ I+YN L+ C+ + D+ K++ G + G
Sbjct: 248 RGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGF 307
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ T+ T + C +GNFD+A K+FK+ + PD T +L+ L ++ + A+
Sbjct: 308 VPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAE 366
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 50/380 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A+ ++S + SP + L + L K R + ++ + +T + Y
Sbjct: 114 NEAIKLFSLMKSSGVSPSVITFNSLLLI--LLKRGRTNMAHSVFDEMCGTYGVTPDTYTF 171
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LIR + + M D R F +M V+++N L+ C ++ ++ +
Sbjct: 172 NILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVK 231
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL--------- 210
K +LSPD ++Y L++ +C D+AL + EM ++G++ +TY T++
Sbjct: 232 KMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKF 291
Query: 211 -------------------NCLYK--------QGNAEEAERLWSEMEKKGVDLDVAAYNV 243
C Y GN +EA +++ +M++ V D A Y+V
Sbjct: 292 DKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSV 351
Query: 244 RITN-TYGGDPERLKELIDEM-------RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
I N GD ER ++L D++ RD G P +YN + CKN +A++V+
Sbjct: 352 LIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVF 411
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
L + G + + +++T I C G F+ YK+ + +PDF T LL+ G ++K
Sbjct: 412 RQLMKKG-TQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQK 470
Query: 356 KK-IKEAKGVIRTIKKKFPP 374
+ I K + R +K + P
Sbjct: 471 GEPILAYKTLERMLKSSYLP 490
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 148/374 (39%), Gaps = 51/374 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL ++ + P Y + ++ L + ++F I+ ++ +
Sbjct: 257 DEALVVFEEMVSRGLKPNDITY--NTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTY 314
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N L+ + AG FD A++ F +M EL +++ L+ + +++ LFD++
Sbjct: 315 NTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSD 374
Query: 161 KYNL------SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ L +P +Y + C +G + KA + ++ KG + +Y T++
Sbjct: 375 EDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHC 433
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDT 272
K+G E +L M ++ D Y V + N + G+P + ++ M + P T
Sbjct: 434 KEGTFEAGYKLLLFMLRRDYVPDFETY-VLLINGFLQKGEPILAYKTLERMLKSSYLPKT 492
Query: 273 ISYNFLMTCYCKNE-----------MMD------------------------EAKKVYEG 297
++ +++ KN+ M+D +A ++ E
Sbjct: 493 SVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVEL 552
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L +NG I +C +G A K+ + D N +++EGL K K+
Sbjct: 553 LYDNG---YMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKR 609
Query: 358 IKEAKGVIRTIKKK 371
EA G+ + +K
Sbjct: 610 PLEAFGLYYMLVEK 623
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 168/343 (48%), Gaps = 9/343 (2%)
Query: 20 STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFS 79
S+ +S+S + LR P KA ++ + + S Y L + L + K +
Sbjct: 77 SSFTTSLSKTTVFQTLRHIKVPTKAFLFFNWIHEKGFSHNPQTYFIMLEI--LGREKNLN 134
Query: 80 DIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
IE N ++ + +LIRSYG+AG+F +++ F+ M +G V++FN
Sbjct: 135 IARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFN 194
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
++L + + ++DE+ K Y + PD +Y +L++ C + D+ EM +
Sbjct: 195 SVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTS 254
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRITN-TYGGDP 253
+ VTY T+++ L + G + A L + M KK DL DV Y I +
Sbjct: 255 FDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEV 314
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS-PNATTFRT 312
+ ++++EM GLKP+ ++YN L+ C+ + D+ K++ E ++ +G S P+A TF T
Sbjct: 315 DEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNT 374
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
I C +GN D+A+KVF+ + D + +L+ L +K
Sbjct: 375 LINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQK 417
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 130/286 (45%), Gaps = 30/286 (10%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y + D A+ ++M+ G +++++N L+ ++ +DK+ + +++
Sbjct: 304 LIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDG 363
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++ L+ SHC +G+ D+A ++ M+ V + +Y+ ++ L ++G+ +A
Sbjct: 364 GSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKA 423
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E L+ E+ +K + + ++YG KP SY +
Sbjct: 424 EMLFDELFEKEI----------LLSSYGP-----------------KPLAASYKCMFQYL 456
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+N +A++V L + G + + +++ I C G+++ Y + + +PD
Sbjct: 457 CENGKTKKAERVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDI 515
Query: 343 NTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKKVEEEL 387
+ L++G ++K K AK + + +K + P W + L
Sbjct: 516 DIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQT-STWHSILNRL 560
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 131/296 (44%), Gaps = 11/296 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+ALDI ++ P Y + ++ L +++++ ++ ++E K D +
Sbjct: 315 DEALDILEEMNGRGLKPNIVTY--NTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTF 372
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI S+ AG D A + F+ M +L S++ L+ + Y K +LFDE+ +
Sbjct: 373 NTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFE 432
Query: 161 K------YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
K Y P SY + + C++G + KA +L ++ +G + ++Y V+
Sbjct: 433 KEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVILGHC 491
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTI 273
K+G+ E L M ++ D+ Y+ I D P KE +++M + KP T
Sbjct: 492 KEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTS 551
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
+++ ++ + + E+ V + E N + L G DKA+K+
Sbjct: 552 TWHSILNRLLEQGCVHESAGVIVMMLERNIRQNINFSTKCLQLLFDRGLQDKAFKI 607
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG---VDLDVAAYN 242
KA N + KG TY +L L ++ N A +EK+ V L+ +N
Sbjct: 100 KAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFN 159
Query: 243 VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLE 299
I +YG G + +L + M+ G+ P +++N ++ K + AK+VY E L+
Sbjct: 160 SLI-RSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLK 218
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
G P+ T+ I C + D+ + FKE PD T LV+GL + KIK
Sbjct: 219 TYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIK 278
Query: 360 EAKGVIRTIKKK---FPPNVL 377
A ++ + KK P+V+
Sbjct: 279 VAHNLVNGMSKKCKDLSPDVV 299
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 151/292 (51%), Gaps = 6/292 (2%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
I+ N ++ + +LIRSYG+AG+F +++ F+ M +G SV++FN+LL +
Sbjct: 144 IKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLK 203
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
+ +FDE+ Y ++PD ++ +L++ C + D+ EM + V
Sbjct: 204 RGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLV 263
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRITNTYGGDPERLKELI-- 260
TY T+++ L + G A + + M KK +L DV Y + Y E + L+
Sbjct: 264 TYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTT-LVRGYCMKHEIDEALVVF 322
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG-LEENGCSPNATTFRTWIYHLCG 319
+EM GLKP+ I+YN L+ C+ + +D+ K+++EG L G P+ T T + C
Sbjct: 323 EEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCN 382
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+GN + A +VF++ ++++ PD T +L+ L ++ + A+ + + +K
Sbjct: 383 AGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEK 434
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 115/253 (45%), Gaps = 28/253 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Y D A+ F++M G + I++N L+ + DK+ +F+
Sbjct: 305 LVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGG 364
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + L+ +HC++G+ + ALE+ +M V + TY+ ++ L ++GN E A
Sbjct: 365 GFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERA 424
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E+L+ E+ +K + L RD G P +Y +
Sbjct: 425 EQLFDELSEKEILL---------------------------RDDGCTPLVAAYKSMFEFL 457
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+N +A++V+ L + G + + +F+ I C G F+ Y++ + +PD
Sbjct: 458 CRNGKTAKAERVFRQLMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDL 516
Query: 343 NTVKLLVEGLVKK 355
T + L++GL++K
Sbjct: 517 ETYQSLIDGLLQK 529
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 114/270 (42%), Gaps = 13/270 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDEL-------GTPRSVISFNALLFACTRSRLYDKVPILF 155
LIR+ Q G F+ A + FD++ E G V ++ ++ R+ K +F
Sbjct: 411 LIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVF 470
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
++ K+ + D +S+ +L+K HC G+ + ELL M + TY ++++ L +
Sbjct: 471 RQLMKRG--TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQ 528
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTIS 274
+G A + +M K + + ++ + G I M + ++ +
Sbjct: 529 KGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINL 588
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ + + D+A K+ L NG + ++ H + F A+K+ +
Sbjct: 589 STHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFLSH---NRKFLLAHKLLLFCL 645
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
H+ D + ++EGL K K+ EA G+
Sbjct: 646 EKHQNVDIDMCDTVIEGLCKMKRHSEAFGL 675
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 22/368 (5%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
+E D D+AL+I S + H P + Y ++ L S+R+ ++E L ++
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTP--VLKSLCGSERWKEVEELFAEMASNKCAPD 301
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
E ++ S Q G+ D A++ D M E G +++++++L C R+ D V +L
Sbjct: 302 EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLS 361
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
K Y PD I+Y +LK C + A EL+ EM VT+ TV+ L +
Sbjct: 362 RL--KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL----KELIDEMRDAGLKPD 271
+G + A ++ +M + G + D+ YN I G ER EL+ ++ G KPD
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIID---GLCNERCIDDAMELLSNLQSYGCKPD 476
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+++N L+ C + ++A+++ + + C P+ATTF T I LC G +A + K
Sbjct: 477 IVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLK 536
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP---------PNVLRAWKK 382
IP+ +T ++V+ L+K K +EA ++ + P N+ +A K
Sbjct: 537 IMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKA-GK 595
Query: 383 VEEELGLV 390
+EE L L+
Sbjct: 596 MEEALDLL 603
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 139/307 (45%), Gaps = 13/307 (4%)
Query: 69 VRRLAKSKRFSDIETLIES---HKNDPKITQEPYL-CN-LIRSYGQAGMFDHAMRTFDQM 123
+R L + + D L++S K P + CN LI+ G A R F
Sbjct: 65 LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFAT- 123
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
LG +V+++N ++ R+ + L +P PD ++ L+++ C G
Sbjct: 124 --LGASATVVTYNTMVNGYCRAGRIEDARRLISGMP----FPPDTFTFNPLIRALCVRGR 177
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
AL + ++M ++G + VTY+ +L+ K +A L EM KG + D+ YNV
Sbjct: 178 VPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNV 237
Query: 244 RITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I GD + ++ ++ G KPD ++Y ++ C +E E ++++ + N
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C+P+ TF T + LC G D+A KV IPD T +++GL ++ +A
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV 357
Query: 363 GVIRTIK 369
++ +K
Sbjct: 358 ELLSRLK 364
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 147/360 (40%), Gaps = 41/360 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A+++ S + + P + Y ++ L +++ E L+ E
Sbjct: 354 DDAVELLSRLKSYGCKPDTIAYTT--VLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFN 411
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I S Q G+ D A++ +QM E G ++++N+++ R D L + +
Sbjct: 412 TVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL-QS 470
Query: 162 YNLSPDKISYGLLLK-----------------------------------SHCDSGSSDK 186
Y PD +++ LLK S C G +
Sbjct: 471 YGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQ 530
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+E L M G TY V++ L K G +EA +L S M DL YN I+
Sbjct: 531 AIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDL--ITYNTVIS 588
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
N T G E +L+ M GL PDTI+Y L C+ + D A ++ L++ G SP
Sbjct: 589 NITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSP 648
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+AT + + C + D A F V +PD +T +L+E L + + EAK ++
Sbjct: 649 DATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLL 708
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 111/258 (43%), Gaps = 6/258 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A+++ S++ + P + + ++ L R+ D E L+ + +
Sbjct: 459 DDAMELLSNLQSYGCKPDIVTF--NTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFN 516
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I S Q G+ A+ T M E G + ++N ++ A ++ K +
Sbjct: 517 TVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKA---GKTQEALKLLSGM 573
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N +PD I+Y ++ + +G ++AL+LL M + G+ T+TY ++ + ++ +
Sbjct: 574 TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ ++ G+ D YN + + + + M +G PD +Y L+
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLE 693
Query: 281 CYCKNEMMDEAKKVYEGL 298
++DEAK++ L
Sbjct: 694 ALAYECLLDEAKQLLVNL 711
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 232 KGVDLDVAAYNVRITNTYGG----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
K + L V N+ I G D ER+ + G ++YN ++ YC+
Sbjct: 92 KCLPLPVVPCNILIKRLCSGGRVADAERVFATL------GASATVVTYNTMVNGYCRAGR 145
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTV 345
+++A+++ G+ P+ TF I LC G A VF + M+H+ P T
Sbjct: 146 IEDARRLISGMPF---PPDTFTFNPLIRALCVRGRVPDALAVFDD--MLHRGCSPSVVTY 200
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK 371
+L++ K ++A ++ ++ K
Sbjct: 201 SILLDATCKASGYRQAMVLLDEMRAK 226
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +AG + A+ M G I++ +L + R D+ + + +
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRL-QDM 644
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD Y +L C + +D A++ M + G TY +L L + +EA
Sbjct: 645 GLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEA 704
Query: 223 ERLWSEMEKKGV 234
++L + GV
Sbjct: 705 KQLLVNLCSLGV 716
>gi|195627114|gb|ACG35387.1| hypothetical protein [Zea mays]
Length = 371
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 153/327 (46%), Gaps = 20/327 (6%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R+LA++ R DI+ + P P + + G+ D A M T
Sbjct: 33 LRQLARAGRLDDIDATLA-----PLFPSHPVAA--LSALSTLGLPDRASALLGTMTSPNT 85
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
LL + L + +P+ D ++ +L KS C + +D AL
Sbjct: 86 AHLNAVLGPLLRRRRLAGLVPSILAAHASVPR------DAVTDSILAKSLCLTSGADSAL 139
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRIT- 246
LL + + G + +TT+++ YKQ AE +W M + G+ D AAYN R+T
Sbjct: 140 HLLRK-PSSGAPPSLQLFTTIIDSFYKQRLPHRAEEMWRAMVQDHGIAPDTAAYNARLTY 198
Query: 247 NTYGGDPERLKELIDEMRD-AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN---G 302
+ G + +KELI MR+ A L+PD SYN LM +++ +DEA +VY LE
Sbjct: 199 KSTNGTVDEVKELIRVMREEASLRPDVGSYNALMRAMARHKRLDEAVEVYRSLEAGKKAD 258
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ T+ + LCG+G + +A VF V K+ D TV++LV GL K + A+
Sbjct: 259 VVPDCATYSCVVGALCGAGRWSEAEDVFYAGVKRRKVADLGTVRVLVRGLKDAGKGRAAR 318
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEELGL 389
V+ + KKFP W+++EE GL
Sbjct: 319 RVVVGLCKKFPEMFDGPWRELEEAAGL 345
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 170/356 (47%), Gaps = 18/356 (5%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA+++ + +H P Y+ +T L K L + K +
Sbjct: 167 KAMELLEEMERHGCPPDVMTYSSLIT--GLGKDGETVKAFKLFQEMKRRGRKPDSITFTA 224
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G+AG D A+ D+M E G V+++NAL+ + + L DE+ K+
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM-KRN 283
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y L+ + D+A ++L +ME +G T+TY T++N L K G +A
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
RL+ M+ KG + DV Y+ IT G R++ L +EM G++PD +Y ++
Sbjct: 344 GRLFDRMKSKGCNPDVVTYSTLITAL--GKAARVESACVLFEEMESVGIQPDLFTYCSII 401
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T K +D+A +++ + G SP+ T+ ++ L G F +A K+F++ +
Sbjct: 402 TVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLL 461
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK--------KFPP--NVLRAWKKVEE 385
PD T L+ GL K K++ +A G+++ + + KF +L +W V+E
Sbjct: 462 PDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDE 517
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 133/244 (54%), Gaps = 6/244 (2%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+V+++N+LL A ++ ++ +LF+E+ K +PD +SY L+ S +G + ALE+
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEEL-KAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
+ EM+ KG + TY T+++CL K G +EA RL +EM G DV YN I+
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTL-- 124
Query: 251 GDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G RL E L EMR+ G PDT +YN L+ K +A ++ E +E +GC P+
Sbjct: 125 GKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDV 184
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ + I L G KA+K+F+E + PD T L++ L K ++ +A ++
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244
Query: 368 IKKK 371
+K++
Sbjct: 245 MKER 248
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 153/302 (50%), Gaps = 10/302 (3%)
Query: 78 FSDIETLIESH-------KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
F + L+E++ +N K Y C LI +A D A + +M++ G P
Sbjct: 264 FGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC-LITGLIKASQLDEACQVLKKMEKEGCPP 322
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
I++N L+ ++ L + LFD + K +PD ++Y L+ + + + A L
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSK-GCNPDVVTYSTLITALGKAARVESACVL 381
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-Y 249
EME+ G++ TY +++ L K G ++A+RL+SEM KG+ DV YN + +
Sbjct: 382 FEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGR 441
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
GG + +++ ++M+++GL PD +Y+ L+ K + +D+A + + L E GC+ ++
Sbjct: 442 GGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLK 501
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
F + L GN D+A+++ + + P ++ L++ L K ++ EA + +K
Sbjct: 502 FDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLK 561
Query: 370 KK 371
++
Sbjct: 562 EQ 563
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 117/266 (43%), Gaps = 37/266 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G+AG+ + A R FD+M G V++++ L+ A ++ + +LF+E+ +
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM-ESV 388
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++ +G D A L +EM KG+ +TY LN L + G +EA
Sbjct: 389 GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEA 448
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN----------------------------------- 247
+++ +M++ G+ DVA Y+ +
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEI 508
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
T G+ + EL+ GL P SYN L+ K + EA E L+E G P+
Sbjct: 509 LTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPD 568
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKE 332
++ + I L +G D A+++ +E
Sbjct: 569 IVSYSSLISALGQTGQIDTAFELLEE 594
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELI 260
VTY ++LN L K G EEA+ L+ E++ DV +Y+ I N+ G G E E++
Sbjct: 9 VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLI-NSLGRAGKWEAALEVV 67
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
EM+ G KP+ +YN L+ C K DEA ++ + +NGC P+ T+ I L +
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
G +A+ +F E +PD T L+ GL K + ++A ++ +++ PP+V+
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 8/253 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYL---CNLIRSYGQAGMFDHAMRTFDQMDE 125
+ L K+ R L E ++ + +P L C++I G+AG D A R F +M
Sbjct: 366 ITALGKAARVESACVLFEEMES---VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G VI++NA L + R + + +F+++ K+ L PD +Y LL + D
Sbjct: 423 KGLSPDVITYNAFLNSLGRGGRFKEARKIFEDM-KESGLLPDVATYDALLLGLSKTKEVD 481
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A LL E+ +G ++ + L L GN +EA L KG+ ++YN I
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALI 541
Query: 246 TN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G ++++++ G KPD +SY+ L++ + +D A ++ E + + G
Sbjct: 542 DALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLK 601
Query: 305 PNATTFRTWIYHL 317
+ ++ + L
Sbjct: 602 LSPRSYSNLVRKL 614
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKKYNLSPDKI 169
G D A + G S+NAL+ A ++ R+ + L D K+ PD +
Sbjct: 513 GNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLED--LKEQGGKPDIV 570
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
SY L+ + +G D A ELL EM +G++++ +Y+ ++ L G
Sbjct: 571 SYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 162/339 (47%), Gaps = 6/339 (1%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
+E D D+AL+I S++ H P + Y ++ L S+R+ ++E L+ ++
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTP--VLKSLCGSERWKEVEELLAEMTSNNCAPD 390
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
E ++ S Q G+ D A+ D M E G +++++++L C R+ D V +L
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
K Y PD I+Y +LK C + ++A EL+ EM VT+ TV+ L +
Sbjct: 451 RL--KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTIS 274
+G + A R+ +M + G D+ YN I + EL+ +++ G KPD ++
Sbjct: 509 KGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+N L+ C + ++A+++ + + C P+ TF T I LC G +A + K
Sbjct: 569 FNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMA 628
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+P+ +T ++V+ L+K K + A ++ + P
Sbjct: 629 ENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTP 667
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 133/277 (48%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A+ + G +++ +L + S + +V L E+
Sbjct: 327 LINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN- 385
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N +PD++++ ++ S C G D+A+E+++ M G VTY+++L+ L G ++A
Sbjct: 386 NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDA 445
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
L S ++ G D AY + + ER +EL+ EM + PD +++N ++
Sbjct: 446 VELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ ++D A +V E + ENGCSP+ T+ I LC D A ++ + PD
Sbjct: 506 LCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L++GL + ++A+ ++ ++ PP+ L
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDEL 602
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 39/362 (10%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A+++ S + + P + Y ++ L ++++ E L+ E
Sbjct: 443 DDAVELLSRLKSYGCKPDTIAYTT--VLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFN 500
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL------ 154
++ S Q G+ D A+R +QM E G ++++N ++ C S + D + +L
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560
Query: 155 --------FDEIPK-------------------KYNLSPDKISYGLLLKSHCDSGSSDKA 187
F+ + K + N PD++++ ++ S C G +A
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+E L M G + TY+ V++ L K G A+ A L S M DL YN I+N
Sbjct: 621 IETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDL--ITYNTVISN 678
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
T G E +L+ M GL PDT +Y L C+ + D A ++ +++ G SP+
Sbjct: 679 LTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPD 738
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T + + C D A F V +PD +T +L+E L + EAK ++
Sbjct: 739 TTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLA 798
Query: 367 TI 368
++
Sbjct: 799 SL 800
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 12/266 (4%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRS--VISFNALL-FACTRSRLYDKVPILFDEIPK 160
+RS Q G D A+ FD M G V+ N L+ C+ R+ D + +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDA-----ERVFA 211
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
S ++Y ++ +C +G + A L+N M T T+ ++ L +G
Sbjct: 212 ALGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIP 268
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLM 279
+A ++ +M +G V Y++ + T R L+DEMR G +PD ++YN L+
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C +DEA + L +GC P+A T+ + LCGS + + ++ E +
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD T +V L ++ + A V+
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVV 414
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 26/232 (11%)
Query: 175 LKSHCDSGSSDKALELLNEMENKGVE--VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+S G D+AL L + M + G V ++ L G +AER+++ +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213
Query: 233 GVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
G V YN + N Y G E + LI+ M PDT ++N L+ C + +
Sbjct: 214 GPSATVVTYNTMV-NGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPD 269
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A V++ + GCSP+ T+ + C + +A + E PD T +L+
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329
Query: 351 GLVKKKKIKEAKGVIRTIKKK--------FPPNVLRA------WKKVEEELG 388
+ + + EA ++ + + P VL++ WK+VEE L
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTP-VLKSLCGSERWKEVEELLA 380
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 9/194 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK--ITQEPYL 100
+A++ ++++ P SS Y+ + V L K+ + L+ N IT +
Sbjct: 619 QAIETLKIMAENGCVPNSSTYS--IVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVI 676
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
NL + AG + A+ M G ++ +L + R D+ + + +
Sbjct: 677 SNLTK----AGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRV-Q 731
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
LSPD Y +L C +D A++ M + G TY +L L G +
Sbjct: 732 DTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLD 791
Query: 221 EAERLWSEMEKKGV 234
EA+RL + + GV
Sbjct: 792 EAKRLLASLCSLGV 805
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 170/355 (47%), Gaps = 30/355 (8%)
Query: 20 STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFS 79
++ S+S + L+SE +P AL I+ SV++ + + Y ++RL
Sbjct: 2 ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTR-FPGYSHTPYVFHHILKRLF------ 54
Query: 80 DIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISFNAL 138
DPK+ +Y + M D A+ F +M E+ G + S+N+L
Sbjct: 55 -----------DPKLVAH--------AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSL 95
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A S +D+ F + LSP+ +Y +L+K C DKA ELLN M +G
Sbjct: 96 LNALIESNKWDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQG 154
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLK 257
+Y T++N L K G +A +L+ EM ++GV DVA YN+ I + GD
Sbjct: 155 FSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNAS 214
Query: 258 ELIDE-MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
E+ + ++ + P+ SYN ++ CK DE+ +++ +++N + T+ T I+
Sbjct: 215 EIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHG 274
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LCGSGN D A +V+KE PD ++ G ++ +I+E + + ++K+
Sbjct: 275 LCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKE 329
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 135/300 (45%), Gaps = 42/300 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y +AG + + + M++ G R+V+S+N L+ + D+ +++ +P+K
Sbjct: 306 MLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEK- 363
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG----- 217
+ D ++YG+L+ C +G +KAL +L E EN ++ T Y++++N L ++G
Sbjct: 364 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 423
Query: 218 -------------------NA-----------EEAERLWSEMEKKGVDLDVAAYNVRITN 247
NA E+A R + M KG V YN I
Sbjct: 424 AGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 483
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
ER E L+ EM G KP+ I+Y+ LM C+ + +D A ++ E G
Sbjct: 484 L--SKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFK 541
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ I+ LC SG + A +++ E + +P+ T L+EG K + + A +
Sbjct: 542 PDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKI 601
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 133/347 (38%), Gaps = 73/347 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-------SRLYDKV---P 152
LI S + G A++ FD+M E G V +N L+ + S +++++ P
Sbjct: 165 LINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGP 224
Query: 153 ILFDEIP-------------------------KKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ IP KK D +Y L+ C SG+ D A
Sbjct: 225 SVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGA 284
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-- 245
+ EM GV V Y T+LN + G EE LW MEK+G V +YN+ I
Sbjct: 285 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRG 343
Query: 246 -------------------------TNTYG---------GDPERLKELIDEMRDAGLKPD 271
+ TYG G + +++E + D
Sbjct: 344 LFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLD 403
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T +Y+ ++ C+ +DE V + + ++GC PN I + + A + F
Sbjct: 404 TFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFG 463
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
V P T L+ GL K ++ EA +++ ++K + PN++
Sbjct: 464 NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMI 510
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 6/330 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ I+ + + S Y + V L K+ + +++E +N
Sbjct: 351 DEAISIWELLPEKDCCADSMTYG--VLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 408
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPK 160
++I + G D DQM + G + NA++ R S+L D + + + K
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSK 468
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P ++Y L+ + +A L+ EM KG + +TY+ ++N L + +
Sbjct: 469 --GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLD 526
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A LW + +KG DV +N+ I G E +L EM+ P+ +++N LM
Sbjct: 527 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM 586
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K + A K+++ + + G P+ ++ + LC A ++V +
Sbjct: 587 EGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVL 646
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
P T +LV+G + K E V ++K
Sbjct: 647 PTAITWNILVQGYLALKGYMEPVFVPASMK 676
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 172/329 (52%), Gaps = 9/329 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN-DPKITQEP 98
D D+A D+ ++ P Y + + L K++R + L+E+ ++ K T
Sbjct: 390 DVDRAFDMLDVMTTKGIFPNLHTY--NTMICGLLKARRLDEALELLENMESLGVKPTAFS 447
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y+ I YG++G A+ TF+ M + G S+ + NA L+ + + +F+++
Sbjct: 448 YVL-FIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDL 506
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K LSPD ++Y +L+K + +G DKA +LL+EM +KG E + +++N LYK G
Sbjct: 507 -HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGR 565
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYN 276
+ A +++ ++ + V YN+ +T G + + LK EL M ++G P+TI++N
Sbjct: 566 VDAAWKMFGRLKNLKLAPTVVTYNILLTGL-GKEGKILKALELFGSMTESGCPPNTITFN 624
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ C KN+ +D A K++ + C+P+ T+ T IY L G D A+ F +
Sbjct: 625 SLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF 684
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD+ T+ L+ G+V+ ++++A V+
Sbjct: 685 LS-PDYVTLCTLIPGVVRHGRVEDAIKVV 712
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +G+ G + R +++M+ G V+++ L+ A +S D+ + D + K
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTK- 404
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y ++ + D+ALELL ME+ GV+ T +Y ++ K G+ +A
Sbjct: 405 GIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKA 464
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M+K+G+ +AA N + T G +++ +++ GL PD+++YN LM C
Sbjct: 465 IDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKC 524
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K +D+A ++ + GC P+ + I L +G D A+K+F + P
Sbjct: 525 YSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPT 584
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T +L+ GL K+ KI +A + ++ + PPN +
Sbjct: 585 VVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTI 621
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 126/250 (50%), Gaps = 2/250 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++G++ + + +M G + I+ N ++ A +S +K L+ E+
Sbjct: 837 LLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG- 895
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ SP +YG L+ +G S++A+++ EM + G +V Y ++N K G + A
Sbjct: 896 DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M K+G+ D+ +Y + + G + + +E++ GL PDT+SYNF++
Sbjct: 956 CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIING 1015
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K+ +DEA ++ ++ G SP+ T+ I HL +G D A K+++E +V P
Sbjct: 1016 LGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPS 1075
Query: 342 FNTVKLLVEG 351
T L+ G
Sbjct: 1076 VFTYNALIRG 1085
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 8/272 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
+K D+YS + P + ++ + L KS + ++ E D T Y
Sbjct: 848 NKLYDLYSEMRSRGCEP--NAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTY- 904
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI +AG + AM+ F++M + G P SVI +N L+ +S D LF ++
Sbjct: 905 GPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVI-YNILINGFGKSGEIDFACELFKKMV 963
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ + PD SY +L++ C +G D+A++ E++ G++ TV+Y ++N L K
Sbjct: 964 KE-GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRL 1022
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA L+SEM+ +G+ D+ YN I + G + ++ +E++ GL+P +YN L
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ + + D+A V++ + GCSPN TF
Sbjct: 1083 IRGHSLSGNKDQAFSVFKKMMVVGCSPNTETF 1114
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 3/276 (1%)
Query: 116 AMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A FD+ + LG ++ S+N L+ S +K LF+++ K P+ +Y LL
Sbjct: 779 AQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDM-KSAGTHPNNFTYNLL 837
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L +H S +K +L +EM ++G E +T+ +++ L K N +A L+ E+
Sbjct: 838 LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897
Query: 235 DLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
Y I G E+ ++ +EM D G P+++ YN L+ + K+ +D A +
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+++ + + G P+ ++ + LC +G D+A + F+E + PD + ++ GL
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017
Query: 354 KKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
K +++ EA + +K + L + + LG+
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGI 1053
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 6/282 (2%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +C L++ A D A+ + M+ LG + S+ + +S K
Sbjct: 412 TYNTMICGLLK----ARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDT 467
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F E KK + P + L + ++G +A ++ N++ G+ +VTY ++ C
Sbjct: 468 F-ETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYS 526
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTI 273
K G ++A +L SEM KG + DV N I Y G + ++ +++ L P +
Sbjct: 527 KAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVV 586
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN L+T K + +A +++ + E+GC PN TF + + L + D A K+F
Sbjct: 587 TYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRM 646
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
M++ PD T ++ GL+++ +I A +KK P+
Sbjct: 647 TMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPD 688
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 154/345 (44%), Gaps = 16/345 (4%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIET 83
+S+S + + L+S DP+ A + VS+ + V + A + + L + +R D+
Sbjct: 94 TSVSEEEVMTILKSISDPNSAFSYFKIVSQ-LTNFVHTTDACNYMLEILREQRRIEDMVF 152
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
+ + + + ++ G A +M E+G + S+N L+
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLI---- 208
Query: 144 RSRLYDKVPILFDEIPKKY------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+ +P +E K Y + P +Y L+ + G + K + LL EM++
Sbjct: 209 ----HLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI 264
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERL 256
G+ TYT + L + ++A ++ EM+ +G DV Y V I G ++
Sbjct: 265 GLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKA 324
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
KEL +MR + PD ++Y LM + K ++ K+ + +E +G +P+ T+ I
Sbjct: 325 KELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEA 384
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
LC SG+ D+A+ + P+ +T ++ GL+K +++ EA
Sbjct: 385 LCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 16/314 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFS---DIETLIESHKNDPK-ITQE 97
+KAL+++ + P + + +L + KSKR + D+ + + S +P IT
Sbjct: 813 EKALELFEDMKSAGTHP--NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHN 870
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+ L++S + A+ + ++ + ++ L+ ++ ++ +F+E
Sbjct: 871 IIISALVKSNN----LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEE 926
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ Y P+ + Y +L+ SG D A EL +M +G+ +YT ++ CL G
Sbjct: 927 M-LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITG 985
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTIS 274
+EA + + E++ G+D D +YN I G RL E L EM++ G+ PD +
Sbjct: 986 RIDEAVQYFEELKLTGLDPDTVSYNFIINGL--GKSRRLDEALSLFSEMKNRGISPDLYT 1043
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
YN L+ +D A K+YE L+ G P+ T+ I SGN D+A+ VFK+ +
Sbjct: 1044 YNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMM 1103
Query: 335 MVHKIPDFNTVKLL 348
+V P+ T L
Sbjct: 1104 VVGCSPNTETFAQL 1117
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G++ D A+ F +M G + ++NAL+ + D +++E+ +
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEEL-QLV 1070
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
L P +Y L++ H SG+ D+A + +M G T T+ + N
Sbjct: 1071 GLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPN 1119
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 2/265 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G D A+ D+M E G +V ++N L+ A + L +E+ K
Sbjct: 223 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK- 281
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD +Y +L+ HC G+ KALE+ M +GV T VTYT ++ L K+G +E
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L+ E ++G+ D+ YN I +++ G+ +R E++ EM + PD ++YN LM
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +DEA+K+ + + E G P+ T+ T I G+ A ++ E + P
Sbjct: 402 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 461
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR 366
T L++GL K + +A+ +++
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVK 486
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++R AG A+ QM PR + +++N ++ C+R R+ + I+ E+ +
Sbjct: 120 MLRHLCSAGKPARALELLRQM-----PRPNAVTYNTVIAGFCSRGRVQAALDIM-REMRE 173
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNA 219
+ ++P++ +YG ++ C G D+A+++ +EM KG V+ V Y ++ QG
Sbjct: 174 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 233
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A M ++GV + VA YN+ + + G EL++EM GL PD +YN L
Sbjct: 234 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 293
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + +A +++E + G T+ IY L G + K+F E+V
Sbjct: 294 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 353
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD L+ I A ++ ++KK
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 173/389 (44%), Gaps = 43/389 (11%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
+ L+S DPD AL +++ + Y+ V +LA+S+ F +ETL++ +N
Sbjct: 386 ADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSA--LVYKLARSRNFEAVETLLDYLQNIN 443
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKV 151
+E LI+ YG++ M + A+ F +M R+++SFN LL R D +
Sbjct: 444 IRCRETLFIALIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAI 503
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
I FD K + IS+ +++K G DKA ++ EM +K V+ T VT+ +++
Sbjct: 504 GI-FDR-STKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIG 561
Query: 212 CLYKQGNAEEAERLWSEM----------------------------EKKGVDLDVAAYNV 243
L +G+ + A L +M +K D+D
Sbjct: 562 FLCGKGDLDGAMGLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 621
Query: 244 RITNTYG---------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
R+ N +G G + K L+ EM+ KPD ++YN L+ CK EA KV
Sbjct: 622 RLLN-FGVLMSDLGRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKV 680
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ GC PNA T+R + C +F+ KV +M P + LV GL+K
Sbjct: 681 LVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLK 740
Query: 355 KKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
KI A V+ ++K+ L AW+ +
Sbjct: 741 NGKIDGACFVLEEMEKRKMRFHLEAWEAL 769
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G D A+ D+M E G +V ++N L+ A + L +E+ K
Sbjct: 592 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK- 650
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD +Y +L+ HC G+ KALE+ M +GV T VTYT ++ L K+G +E
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L+ E ++G+ D+ YN I +++ G+ +R E++ EM + PD ++YN LM
Sbjct: 711 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 770
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +DEA+K+ + + E G P+ T+ T I G+ A ++ E + P
Sbjct: 771 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T L++GL K + +A+ +++ +
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEM 857
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++R AG A+ QM PR + +++N ++ C+R R+ + I+ E+ +
Sbjct: 489 MLRHLCSAGKPARALELLRQM-----PRPNAVTYNTVIAGFCSRGRVQAALDIM-REMRE 542
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNA 219
+ ++P++ +YG ++ C G D+A+++ +EM KG V+ V Y ++ QG
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A M ++GV + VA YN+ + + G EL++EM GL PD +YN L
Sbjct: 603 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 662
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + +A +++E + G T+ IY L G + K+F E+V
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD L+ I A ++ ++KK
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G D A+ D+M E G +V ++N L+ A + L +E+ K
Sbjct: 597 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK- 655
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD +Y +L+ HC G+ KALE+ M +GV T VTYT ++ L K+G +E
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L+ E ++G+ D+ YN I +++ G+ +R E++ EM + PD ++YN LM
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +DEA+K+ + + E G P+ T+ T I G+ A ++ E + P
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T L++GL K + +A+ +++ +
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEM 862
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++R AG A+ QM PR + +++N ++ C+R R+ + I+ E+ +
Sbjct: 494 MLRHLCSAGKPARALELLRQM-----PRPNAVTYNTVIAGFCSRGRVQAALDIM-REMRE 547
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNA 219
+ ++P++ +YG ++ C G D+A+++ +EM KG V+ V Y ++ QG
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A M ++GV + VA YN+ + + G EL++EM GL PD +YN L
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 667
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + +A +++E + G T+ IY L G + K+F E+V
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD L+ I A ++ ++KK
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 161/347 (46%), Gaps = 41/347 (11%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + K + FS +E +++ K D + + L+ + G A + FD+
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M E G V + +L+ R + +LFDE+ +K LSP +YG L+ C G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVG 378
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
A L+NEM++KGV +T V + T+++ ++G +EA ++ ME+KG DV N
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 243 -------------------------------VRITNTYG-----GDPERLKELIDEMRDA 266
V TN G+ E K L EM
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G++P+ I+YN ++ YCK + EA+K+ +E NG P++ T+ + I+ C + N D+A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 327 YKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIKKK 371
++F E M K D N+V +++ GL K K EA G+ +K+K
Sbjct: 559 MRLFSE--MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 8/275 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLC 101
+A ++ +++ SP S Y + + K E L+ E ITQ +
Sbjct: 347 RAFLLFDELTEKGLSP--SSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF-N 403
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV-PILFDEIPK 160
LI Y + GM D A +D M++ G V + N + R + YD+ LF +
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
LS +SY L+ +C G+ ++A L EM +KGV+ +TY ++ KQG +
Sbjct: 464 GVKLST--VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
EA +L + ME G+D D Y I D + L EM GL ++++Y ++
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ K DEA +Y+ ++ G + + + I
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 136/328 (41%), Gaps = 67/328 (20%)
Query: 71 RLAKSKRFSDIETLIESHKND-------PKITQEPYLCNL---------------IRSYG 108
RL ++RF+++ +L+ S ND ++ C++ R Y
Sbjct: 106 RLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYV 165
Query: 109 QAGMFDHAMRTFDQMDELGTP---RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
GMF+ +R FD M + G RS I F L+ A R R+
Sbjct: 166 DNGMFEEGLRVFDYMVKKGLSIDERSCIVF--LVAAKKRRRI------------------ 205
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
D LE+ M + GV++T + T V+ L ++G E++++L
Sbjct: 206 -------------------DLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKL 246
Query: 226 WSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
E KG+ + YN I N Y D ++ ++ M+ G+ + ++Y LM
Sbjct: 247 IKEFSVKGIKPEAYTYNT-IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
KN M +A+K+++ + E G + + + I C GN +A+ +F E P
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++G+ K ++ A+ ++ ++ K
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSK 393
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 36/148 (24%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRL------------- 147
NLI Y + G + A R F +M G + I++N +++A C + ++
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 148 ---------------------YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
D+ LF E+ K L + ++Y +++ +G SD+
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVMISGLSKAGKSDE 592
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLY 214
A L +EM+ KG + YT ++ ++
Sbjct: 593 AFGLYDEMKRKGYTIDNKVYTALIGSMH 620
>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Glycine max]
Length = 529
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 172/346 (49%), Gaps = 25/346 (7%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDL--TVRRLAKSKRFSDIETLIESHKN 90
S + + DPD +L I+ H+A P S Q L +L++++RF +E+L+ +H
Sbjct: 61 SLISRQHDPDLSLQIF-----HHAHPSLSHAPQPLHALFLKLSRARRFYHLESLL-THLP 114
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
EP L LIR+YG AG A+R F + LG V S NALL A +++ +
Sbjct: 115 --NPPPEPPLTTLIRAYGLAGKPLSALRIFLKFQPLG----VRSLNALLNALVQNKRHRL 168
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
+F +K+ L P+ +S +LLK+ C D A+ +L+EM G+ V+Y+TVL
Sbjct: 169 AHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVL 228
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGL-- 268
+G+ E A R++ E+ KG DV +Y V ++ RL +L+D +R L
Sbjct: 229 GGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFC-----RLGKLVDAIRMMDLME 283
Query: 269 ----KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
+P ++Y ++ YCK EA + E + E G P++ + LC G+ +
Sbjct: 284 ENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVE 343
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+A +V++ V V +V L K+ K+ EA+GV+ ++K
Sbjct: 344 RACEVWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDELEK 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 127/244 (52%), Gaps = 5/244 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G + AMR F ++ + G V S+ L+ C +L D + ++ ++ ++ + P ++
Sbjct: 235 GDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMM--DLMEENRVQPSEV 292
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+YG++++++C +A+ LL +M KG+ ++V V++ L ++G+ E A +W +
Sbjct: 293 TYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACEVWRGV 352
Query: 230 EKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+KG + A + + G + ++DE+ + G ++YN L+ C+ +
Sbjct: 353 VRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDEL-EKGEVASLMTYNTLIAGMCERGQL 411
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
EA ++++ + E G PNA T+ + C G+ +A +V +E V +P+ +T +L
Sbjct: 412 CEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSIL 471
Query: 349 VEGL 352
V+G+
Sbjct: 472 VDGI 475
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 157/325 (48%), Gaps = 4/325 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN- 102
ALDI + + ++Y + K R + + + ++ E + N
Sbjct: 91 ALDIMREM-RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNA 149
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G D A+ D+M E G +V ++N L+ A + L +E+ K
Sbjct: 150 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK- 208
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD +Y +L+ HC G+ KALE+ M +GV T VTYT+++ L K+G +E
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L+ E ++G+ D+ YN I +++ G+ +R E++ EM + PD ++YN LM
Sbjct: 269 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 328
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +DEA+K+ + + + G P+ T+ T I G+ A ++ E + P
Sbjct: 329 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 388
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR 366
T L++GL K + +A+ +++
Sbjct: 389 LLTYNALIQGLCKNGQGDDAENMVK 413
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 4/272 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG--TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I + G A+ +M E G P + C R+ + V + FDE+
Sbjct: 78 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV-FDEMLT 136
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + P+ + Y L+ +CD G D AL + M +GV +T TY +++ L+ G
Sbjct: 137 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 196
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L EM KG+ DV YN+ I + G+ ++ E+ + M G++ ++Y L+
Sbjct: 197 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 256
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K + E K+++ G P+ + I SGN D+A+++ E
Sbjct: 257 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 316
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L+ GL ++ EA+ +I + K+
Sbjct: 317 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 348
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 130/273 (47%), Gaps = 10/273 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++R AG A+ QM PR + +++N ++ C+R R+ + I+ E+ +
Sbjct: 47 MLRHLCSAGKPARALELLRQM-----PRPNAVTYNTVIAGFCSRGRVQAALDIM-REMRE 100
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNA 219
+ ++P++ +YG ++ C G D+A+++ +EM KG V+ V Y ++ QG
Sbjct: 101 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 160
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A M ++GV + VA YN+ + + G EL++EM GL PD +YN L
Sbjct: 161 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 220
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + +A +++E + G T+ + IY L G + K+F E+V
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD L+ I A ++ ++KK
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 313
>gi|226501132|ref|NP_001144243.1| hypothetical protein [Zea mays]
gi|195638968|gb|ACG38952.1| hypothetical protein [Zea mays]
gi|413939592|gb|AFW74143.1| hypothetical protein ZEAMMB73_602318 [Zea mays]
Length = 419
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 192/413 (46%), Gaps = 32/413 (7%)
Query: 1 MTSLRH--IRRLCTATTAAGSSTTASSISVSKAKSKLR-SEFDPDKALDIYSSVSKHYAS 57
+ S RH IR L T T T + +S+ KS +R + PD ++ S H A
Sbjct: 14 LLSRRHLLIRLLSTQTQLVTPPTPTTPADLSRLKSSIRDAATTPDALATLFLSGLPHPAF 73
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFD 114
++ R L+V RLA + R + +++ S P E +L LI Y AGM D
Sbjct: 74 -LADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPH-PSEGFLLRLISLYSAAGMPD 131
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
H++ F L P S + +ALL A +RLYD+ F+ +P + + P +S+ +L
Sbjct: 132 HSLAVF----RLVKPASDRALSALLSAYHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVL 187
Query: 175 LKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME--K 231
LK+ SG A L +EM + GV+ V+ +L G+A+ +RL E+ K
Sbjct: 188 LKALVASGDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVKEIAGPK 247
Query: 232 KGVDLDVAAYNVRIT------NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ + +V YN+R+ ++ + EL+D M G+ P+ S+N ++ C
Sbjct: 248 RRLKPNVGTYNLRMALLCSKMRSFEAE-----ELLDVMGANGVPPNRTSFNTVIKGLCNE 302
Query: 286 EMMDEAKKVYEGLEE------NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ A +++ + E G SPN T+ + L FD A ++ KE +
Sbjct: 303 GEVGAAMALFKRMPEVPRQHGKGVSPNFETYIMLLEALVKKNLFDPALEICKECLRNKWA 362
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPA 392
P F VK LV+GL+K +K K A+ V ++K + + W KVE + ++ A
Sbjct: 363 PPFQAVKGLVQGLLKSRKAKHAREVFMAMRKAVKGDAKQEWIKVEAQFPMLLA 415
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 139/276 (50%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G + A+ F +M++ G +V+++N ++ + + RL + E+ +
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR- 262
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I+Y ++ C G ++A L ME G + VTY +++ LYK +A
Sbjct: 263 GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDA 322
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
SEM +G+ DV Y + Y G L +M G KPD ++YN ++
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ ++++A + + + G PNA T+ T ++ C G D+A ++FKE V + +P+
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPN 442
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
T +LV+GL ++ + EA+ V T+ +K PN+
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 137/270 (50%), Gaps = 5/270 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G + A+R F +M++ G V+++N ++ + + RL + E+ + + P+ ++
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR-GIPPNAVT 410
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L C+ G D+A +L EM + V T+T++ +++ L ++G EA ++ M
Sbjct: 411 YSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT 470
Query: 231 KKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+KGV+ ++ YN + N Y +++ + M G PD SYN L+ YC + M
Sbjct: 471 EKGVEPNIYTYNA-LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRM 529
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
D+AK + + +PN T+ T + LC G A ++FK+ +P T +L
Sbjct: 530 DKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSIL 589
Query: 349 VEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+ GL K + EA + +++K KK P+++
Sbjct: 590 LNGLCKHGHLDEALKLFKSMKEKKLEPDII 619
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 11/254 (4%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+QMD G +V S N L+ R D ++ ++ K + PD I++ L+ C+
Sbjct: 117 NQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKM-FKLGIQPDVITFTTLINGVCN 175
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G A+EL NEM G E ++Y T++N L GN A ++ +ME+ G +V
Sbjct: 176 EGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVT 235
Query: 241 YNVRITNTYGGDPERL----KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
YN I + +RL + + EM G+ PD I+YN ++ C ++EA ++++
Sbjct: 236 YNTIIDSLC---KDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFK 292
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+E+NGC P+ T+ I L + A E V PD T ++ GL
Sbjct: 293 RMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLG 352
Query: 357 KIKEAKGVIRTIKK 370
++ EA IR KK
Sbjct: 353 QLNEA---IRLFKK 363
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 1/211 (0%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ N P + +G L S + L N+M+ GV T + ++NCL + + +
Sbjct: 86 RMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVD 145
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +W +M K G+ DV + I G + EL +EM +G +PD ISYN L+
Sbjct: 146 FAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLI 205
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C + + A V++ +E+NGC PN T+ T I LC + A E V
Sbjct: 206 NGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIP 265
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T +V GL ++ EA + + +++
Sbjct: 266 PDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 37/268 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Q GM A F+ M E G ++ ++NAL+ C R ++ + + EI
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF--EIMVG 506
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD SY +L+ +C+S DKA LL +M K + TVTY T++ L G +
Sbjct: 507 KGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLD 566
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A+ EL +M +G+ P ++Y+ L+
Sbjct: 567 AQ----------------------------------ELFKKMCSSGMLPTLMTYSILLNG 592
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ +DEA K+++ ++E P+ + I + G + A +F + P
Sbjct: 593 LCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPP 652
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++++GL+K+ EA + R K
Sbjct: 653 GRTYNVMIKGLLKEGLSDEAYELFRKWK 680
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 130/252 (51%), Gaps = 12/252 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYDKVPILFDEIPKK 161
LI Y G D A++ + M + G +V ++N L+ A R D +L E ++
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVL--EEMQR 282
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSPD +Y +L+ +C G+ KALE+ EM KGV T VTYT+++ ++G +E
Sbjct: 283 NGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQE 342
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+RL+ KKG+ DV YN I ++ GGD ER E++ EM + PD ++YN L+
Sbjct: 343 TDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIR 402
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C +DEA+ + + + + G P+ LC +G D A + KE V P
Sbjct: 403 GFCLLGRLDEARGLIDEMTKRGIQPD--------LGLCKNGQGDDAENLMKEMVGKGITP 454
Query: 341 DFNTVKLLVEGL 352
D +T L+EGL
Sbjct: 455 DDSTYISLIEGL 466
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 116/232 (50%), Gaps = 4/232 (1%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C R+ D + FDE+ + ++P + Y L+ +CD G D AL+ +M +GV +
Sbjct: 194 CKIGRMEDAAKV-FDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAM 252
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKEL 259
T TY +++ L+ G A +A + EM++ G+ DV YN+ I N Y G+ ++ E+
Sbjct: 253 TVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILI-NGYCKEGNEKKALEV 311
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+EM G++ ++Y L+ + + + E ++++ + G P+ + I C
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCA 371
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G+ ++A+++ E PD T L+ G ++ EA+G+I + K+
Sbjct: 372 GGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKR 423
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
+R + + ++ P +V + C R R+ + ++ E+ ++ ++PDK +Y L+
Sbjct: 133 VRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVM-REMRERGGIAPDKYTYATLIS 191
Query: 177 SHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G + A ++ +EM +G V + V Y ++ +G + A + +M ++GV
Sbjct: 192 GWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVA 251
Query: 236 LDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ VA YN+ + + G +++EM+ GL PD +YN L+ YCK +A +V
Sbjct: 252 MTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+E + G A T+ + IY G + ++FK +V PD L+
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCA 371
Query: 355 KKKIKEAKGVIRTI-KKKFPPN 375
++ A ++ + KK+ PP+
Sbjct: 372 GGDMERAFEIMAEMEKKRIPPD 393
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 145/279 (51%), Gaps = 4/279 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++S +AGM A+ F+ M S++++N L+ + + + K LF + ++
Sbjct: 16 VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD+ +Y L+ C SG+++ A +LL+EM +K + TY++++ L K+ EE+
Sbjct: 76 RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 223 ERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ EM G + DV A+N V + E+ +E+ M ++G KPD +SY+ L+
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 282 YCKNEMMDEAKKVYE--GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K +DE+ K+ + G PN TF T I+ LC +G +KA +VF +
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T L+ GL + +K+ +A+ + + + PP+ +
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAV 294
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 5/273 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMD--ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI + G D +++ +M G +VI+F+ L+ R+ +K +F + +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P+K +Y L+ C + +A EL +M + V Y +++ K+G+ +
Sbjct: 252 A-GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 310
Query: 221 EAERLWSEMEK-KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
EAE+L+ EM G+ + +N I G R EL+ EM GL DT +Y L
Sbjct: 311 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRIL 370
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + +DEA +VY+ + E + + +++ LC +GN D+AY VF+ +
Sbjct: 371 IAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 430
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+P+ T ++L E L+K ++++A+ ++ K +
Sbjct: 431 VPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--C--------------- 212
+Y +++S +G +ALE+ M+++ + VTY ++N C
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 213 -------------------LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
L GN E A +L SEM K + +V Y+ I +
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
PE ++++EM AG PD ++N +M + ++ M++A++VY+ + E+G P+ ++
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 313 WIYHLCGSGNFDKAYKVFKESVM--VHKIPDFNTVKLLVEGLVKKKKIKEA 361
I+ L G D++ K+ E M +P+ T L+ GL + ++++A
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKA 242
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y+F++ K M+ +A +V+E ++ C P+ T+ I C +G F KA +F+
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 334 VMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++ PD T L+ GL + A+ ++ ++ K
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDK 110
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 137/278 (49%), Gaps = 4/278 (1%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + G+ GM F + FD+M G I+FN+LL C+R L++ LFDE+ +
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D SY LL + C G D A E+L +M K + V+Y+TV++ K G +E
Sbjct: 369 -RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 222 AERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM G+ LD +YN ++ T G E +++ EM G+K D ++YN L+
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K DE KKV+ ++ PN T+ T I G + +A ++F+E
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D L++ L K + A +I + K+ PNV+
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 124/236 (52%), Gaps = 3/236 (1%)
Query: 93 KITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+I Q+ + N L+ + + G D A QM +V+S++ ++ ++ +D+
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
LF E+ + ++ D++SY LL + G S++AL++L EM + G++ VTY +L
Sbjct: 429 LNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKP 270
KQG +E +++++EM+++ V ++ Y+ I + GG + E+ E + AGL+
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
D + Y+ L+ CKN ++ A + + + + G SPN T+ + I S D++
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-NAEEAERLWSE 228
++ L+ ++ SG ++A+ + N M+ G+ VTY V++ K G ++ + + E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 229 MEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M++ GV D +N + + GG E + L DEM + ++ D SYN L+ CK
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
MD A ++ + PN ++ T I +G FD+A +F E + D +
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 348 LVEGLVKKKKIKEAKGVIRTI 368
L+ K + +EA ++R +
Sbjct: 450 LLSIYTKVGRSEEALDILREM 470
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +AG FD A+ F +M LG +S+N LL T+ ++ + E+
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM-ASV 473
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D ++Y LL + G D+ ++ EM+ + V +TY+T+++ K G +EA
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ E + G+ DV Y+ I G LIDEM G+ P+ ++YN ++
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Query: 282 YCKNEMMDEAKKVYEG 297
+ ++ MD + G
Sbjct: 594 FGRSATMDRSADYSNG 609
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--R 255
G T ++ +++ + G EEA +++ M++ G+ ++ YN I G E +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ + DEM+ G++PD I++N L+ + + + A+ +++ + + ++ T +
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+C G D A+++ + + +P+ + +++G K + EA
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 43/389 (11%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
+ L+S DPD AL +++ + Y+ V +LA+S+ F +ETL++ +N
Sbjct: 457 ADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSA--LVYKLARSRNFEAVETLLDYLQNIN 514
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKV 151
+E LI+ YG++ M + A+ F +M R+++SFN LL + R D +
Sbjct: 515 IRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAI 574
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
I FD K + IS+ +++K G DKA ++ EM +K V+ T VT+ +++
Sbjct: 575 GI-FDR-STKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIG 632
Query: 212 CLYKQGNAEEAERLWSEM----------------------------EKKGVDLDVAAYNV 243
L +G+ + A L +M +K D+D
Sbjct: 633 FLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 692
Query: 244 RITNTYG---------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
R+ N +G G + K L+ EM+ KPD ++YN L+ CK EA KV
Sbjct: 693 RLLN-FGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKV 751
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ GC PNA T+R + C +F+ KV +M P + LV GL+K
Sbjct: 752 LVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLK 811
Query: 355 KKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
KI A V+ ++K+ L AW+ +
Sbjct: 812 NGKIDGACFVLEEMEKRKMRFHLEAWEAL 840
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 168/348 (48%), Gaps = 9/348 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKH--YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
L++E +P+ AL I+ S +H YA P + +RRL K + +++ +
Sbjct: 17 LKAEKNPNAALAIFDSACQHPGYAHP---PFVFHHILRRLMDPKLVVHVGRIVDLMRAQR 73
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKV 151
E + I++Y + M D A+ F M D G + SFN++L A S + +
Sbjct: 74 CTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREA 133
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ F + +SP+ +Y +L+K C +K LL M G+ ++Y T++N
Sbjct: 134 ELFFTYF-QTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLIN 192
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE-MRDAGLK 269
L K GN +A L+ EM +GV+ DV YN+ I GD + E+ + ++ +
Sbjct: 193 ALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY 252
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P +YN ++ CK +DE+ +++ +++N SP+ TF + I+ L +GNF+ A KV
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
F+E + PD T ++ GL + K+ + + + K N++
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIV 360
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 132/303 (43%), Gaps = 36/303 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
+I +AG F+ A + F +M E G V ++NA+L R+ +K L++ + K
Sbjct: 296 MIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN 355
Query: 162 ------YN--------------------------LSPDKISYGLLLKSHCDSGSSDKALE 189
YN L D +YGLL+ C +G +KAL
Sbjct: 356 CCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALR 415
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+L E EN+G ++ T Y+++++ L K+G E+A L +M+K L+ +N + N Y
Sbjct: 416 ILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFN-SLINGY 474
Query: 250 --GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
E ++ EM+ P +SYN ++ CK E +A + + E G P+
Sbjct: 475 VRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDM 534
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I LC D A ++ + + PD +++ GL +K+ A +
Sbjct: 535 ITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQ 594
Query: 368 IKK 370
+++
Sbjct: 595 MRQ 597
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 131/269 (48%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + ++G A+ FD+M G V+ +N L+ R + K ++ + +
Sbjct: 190 LINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTES 249
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P +Y +++ C G D+++E+ N M+ T++++++ L K GN A
Sbjct: 250 SVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAA 309
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+++ EM + G+ DV YN ++ + G + EL + M + +SYN L+
Sbjct: 310 EKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQG 368
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
N+ +++A ++ L E G ++TT+ I LC +G +KA ++ +E+ D
Sbjct: 369 LLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLD 428
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+V GL KK +++A +I +KK
Sbjct: 429 TFAYSSMVHGLCKKGMLEQAVELIHQMKK 457
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 125/295 (42%), Gaps = 2/295 (0%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
L + L K+ + ++E +N+ +++ + GM + A+ QM +
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+ FN+L+ R+ ++ + E+ K + +P +SY ++ C +
Sbjct: 459 RRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSK-DCAPTVVSYNTIINGLCKAERFSD 517
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A L EM +G++ +TY+ +++ L + + A LW + K + D+ +N+ I
Sbjct: 518 AYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIH 577
Query: 247 NTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ E+ +MR PD +++N +M K EA K+++ + E G P
Sbjct: 578 GLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQP 637
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+ ++ LC A + +++ +P+ T +LV +V K + E
Sbjct: 638 DIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 148/304 (48%), Gaps = 35/304 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
L+ + G D A R D+M+++ V+++N L+ C++ R +V L +E+ KK
Sbjct: 324 LVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKG 383
Query: 162 -------YN--------------------------LSPDKISYGLLLKSHCDSGSSDKAL 188
YN LSPD ++Y L+ ++C +G KA
Sbjct: 384 VKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAF 443
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+++EM +KG+++ T T T+L+CL + +EA L K+G LD +Y + I
Sbjct: 444 RMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGY 503
Query: 249 YGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ + +R L DEM++ + P TI+YN ++ C++ +D+A + ENG P+
Sbjct: 504 FKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDE 563
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TT+ I+ C GN +KA++ E + PD T +L+ GL ++ +++A + T
Sbjct: 564 TTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNT 623
Query: 368 IKKK 371
+ K
Sbjct: 624 LVSK 627
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y A+ ++M E G +S+N +L A + RL + L ++ K
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK- 277
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP+K +Y +L+ +C G +A +++ M + T TY ++N G +EA
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEA 337
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R+ EMEK V DV YN I + D + LI+EM G+K + ++YN ++
Sbjct: 338 FRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKW 397
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M EA + +EENG SP+ T+ T I C +G KA+++ E D
Sbjct: 398 MCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKID 457
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T+ ++ L +KK+ EA ++ + K+
Sbjct: 458 TWTLNTILHCLCVEKKLDEAYNLLCSASKR 487
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 4/262 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +Y +AG A R D+M G + N +L C +L + +L +
Sbjct: 429 LIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRG 488
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y L D++SYG+L+ + D+AL L +EM+ + + +T+TY +V+ L + ++
Sbjct: 489 YIL--DEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQ 546
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +EM + G+ D YN+ I G+ E+ + +EM + KPD + N L+
Sbjct: 547 AIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLR 606
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ M+++A K++ L G + T+ T I LC G F+ AY + E P
Sbjct: 607 GLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGP 666
Query: 341 DFNTVKLLVEGLVKKKKIKEAK 362
D T K+++ L +IKEA+
Sbjct: 667 DQYTYKVIIAALTDAGRIKEAE 688
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 118/272 (43%), Gaps = 40/272 (14%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR----SRLYDKVPILFDEIP 159
I +Y Q A + F++M L ++++ N L+ + R S + +L D I
Sbjct: 147 IGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSI- 205
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + P+ S+ +L+ +C AL+ +N+M G TV+Y T+L+ L K+
Sbjct: 206 -KLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLL 264
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+EA ++L+ +M+ GL P+ +YN L+
Sbjct: 265 QEA----------------------------------RDLLLDMKSKGLSPNKHTYNMLV 290
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC+ ++ EA KV E + N P T+ + C G D+A+++ E ++ +
Sbjct: 291 CGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVL 350
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++G + + E +I + KK
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKK 382
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 5/194 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
D+AL+++ + + P + Y + L +S++ I+ L E +N + E
Sbjct: 510 DRALNLWDEMKERQIMPSTITYNS--VIGGLCQSRKVDQAIDKLNEMLENGL-VPDETTY 566
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I + G + A + ++M E V + N LL R + +K LF+ +
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVS 626
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K D ++Y ++ S C G + A +LL EME K + TY ++ L G +
Sbjct: 627 K-GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIK 685
Query: 221 EAERLWSEMEKKGV 234
EAE +M + G+
Sbjct: 686 EAEEFTLKMVESGI 699
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 165/381 (43%), Gaps = 45/381 (11%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP++AL ++ + YA L +LA+S+ F +ET++ K+ +E
Sbjct: 54 DPEEALSLFHRYKEQGFRHYYPSYAALLY--KLARSRMFDAVETILAHMKDTEMQCRESV 111
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD---------- 149
L + YG + A+ F++M + R++ SFNALL + +D
Sbjct: 112 FIALFQHYGP----EKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSY 167
Query: 150 -------------------------KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
K +FDE+ +K + P ++Y L+ C G
Sbjct: 168 EMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQK-RVQPSVVTYNSLIGFLCRKGDL 226
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
DKA+ LL +M KG VTY ++ L EEA++L +M +G + V
Sbjct: 227 DKAMALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGV- 285
Query: 245 ITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ N G G E K L+ EM+ LKPD ++YN L+ CK EA KV ++ G
Sbjct: 286 LMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGG 345
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C PNA T+R + LC G+F+ A V + P T +V GL+K I +
Sbjct: 346 CVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSC 405
Query: 363 GVIRTIKKKFPPNVLRAWKKV 383
V+ ++K+ L +W+ +
Sbjct: 406 FVLEEMEKRKLEFDLESWETI 426
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
L+ G+ G + A +M + V+++N L+ + C + + +L + +
Sbjct: 286 LMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEM--QI 343
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +Y +++ C G + AL +LN M + T+ ++ L K GN +
Sbjct: 344 GGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDG 403
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI 245
+ + EMEK+ ++ D+ ++ I
Sbjct: 404 SCFVLEEMEKRKLEFDLESWETII 427
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 43/389 (11%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
+ L+S DPD AL +++ + Y+ V +LA+S+ F +ETL++ +N
Sbjct: 95 ADLKSVQDPDDALSLFNQYQQMGFKHDYPSYSA--LVYKLARSRNFEAVETLLDYLQNIN 152
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKV 151
+E LI+ YG++ M + A+ F +M R+++SFN LL + R D +
Sbjct: 153 IRCRETLFIALIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAI 212
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
I FD K + IS+ +++K G DKA ++ EM +K V+ T VT+ +++
Sbjct: 213 GI-FDR-STKMGFRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIG 270
Query: 212 CLYKQGNAEEAERL----------------------------WSEMEKKGVDLDVAAYNV 243
L +G+ + A L + E +K D+D
Sbjct: 271 FLCGKGDLDGAMGLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKP 330
Query: 244 RITNTYG---------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
R+ N +G G + K L+ EM+ KPD ++YN L+ CK EA KV
Sbjct: 331 RLLN-FGVLMSDLGRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKV 389
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ GC PNA T+R + C +F+ KV +M P + LV GL+K
Sbjct: 390 LVEMQVGGCEPNAATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLK 449
Query: 355 KKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
KI A V+ ++K+ L AW+ +
Sbjct: 450 NGKIDGACFVLEEMEKRKMRFHLEAWEAL 478
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%), Gaps = 7/278 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI+ +GQ G F +M G +++ L+ C + + L +E+ +
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS-LHNEMVQM 462
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P+ ++YG L+ C G D A ELL+EM KG+++ Y +++N + K GN E+
Sbjct: 463 -GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQ 521
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L EME G+D D Y + + Y GD ++ +L+ EM D GL+P +++N LM
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTT-VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C M+++ ++ + E G P+A T+ T + C + + K++K
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
PD NT +L++G K + +KEA + + I+K + P V
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 141/269 (52%), Gaps = 4/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG +A ++M ++G +++++ AL+ + D L DE+ KK
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK- 497
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + Y ++ C +G+ ++A++L+ EME G++ +TYTTV++ + G+ ++A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L EM +G+ V +NV + N + G E L+ M + G+ PD I+YN LM
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNV-LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C M+ K+Y+ + G +P++ T+ I C + N +A+ ++KE + +P
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ L++ KKKKI EA+ + ++
Sbjct: 677 TVTSYNALIKRFYKKKKILEARELFEEMR 705
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
E G + S+N ++++ R + L ++ + + +PD +SY ++ +C G
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS-TPDVVSYSTVIDGYCHLGEL 309
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
KAL+L+++M+ KG++ TY +++ L K G + EAE++ EM + + D Y
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I + G + DEM + PD I+Y L+ + + + E + ++ + G
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ T I C +G A+ + E V + P+ T L++GL K ++ A
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 364 VIRTIKKK 371
++ ++KK
Sbjct: 490 LLDEMRKK 497
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + GM + R M E G I++N L+ C R+ + I + +
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY--KRMRN 636
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD +Y +L+K HC + + +A L EM KG T +Y ++ YK+ E
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE 262
A L+ EM G+ D YN + Y GD E L DE
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%), Gaps = 7/278 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI+ +GQ G F +M G +++ L+ C + + L +E+ +
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFS-LHNEMVQM 462
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P+ ++YG L+ C G D A ELL+EM KG+++ Y +++N + K GN E+
Sbjct: 463 -GMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQ 521
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L EME G+D D Y + + Y GD ++ +L+ EM D GL+P +++N LM
Sbjct: 522 AIKLMKEMEVAGIDPDAITYTT-VIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C M+++ ++ + E G P+A T+ T + C + + K++K
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
PD NT +L++G K + +KEA + + I+K + P V
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTV 678
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 140/269 (52%), Gaps = 4/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG +A ++M ++G +++++ AL+ + D L DE+ KK
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK- 497
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + Y ++ C +G+ ++A++L+ EME G++ +TYTTV++ + G+ ++A
Sbjct: 498 GLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA 557
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L EM +G+ V +NV + N + G E L+ M + G+ PD I+YN LM
Sbjct: 558 HKLLQEMLDRGLQPTVVTFNV-LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMK 616
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C M+ K+Y+ + G +P++ T+ I C + N +A+ ++KE + +P
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVP 676
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ L++ KK+K EA+ + ++
Sbjct: 677 TVTSYNALIKRFYKKRKFXEARELFEEMR 705
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 2/248 (0%)
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
E G + S+N ++++ R + L ++ + + +PD +SY ++ +C G
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS-TPDVVSYSTVIDGYCHLGEL 309
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
KAL+L+++M+ KG++ TY +++ L K G + EAE++ EM + + D Y
Sbjct: 310 KKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTL 369
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I + G + DEM + PD I+Y L+ + + + E + ++ + G
Sbjct: 370 IHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGL 429
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ T I C +G A+ + E V + P+ T L++GL K ++ A
Sbjct: 430 KPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANE 489
Query: 364 VIRTIKKK 371
++ ++KK
Sbjct: 490 LLDEMRKK 497
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + GM + R M E G I++N L+ C R+ + I + +
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY--KRMRN 636
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD +Y +L+K HC + + +A L EM KG T +Y ++ YK+ E
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXE 696
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE 262
A L+ EM G+ D YN + Y GD E L DE
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 7/260 (2%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +L L+R G A +++M G VI+++ L+ + +R +D+ L
Sbjct: 519 TYNAFLNGLMRK----GRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+ + + P+ ++Y LL C D+A EL +M +G + VTYTT+L
Sbjct: 575 FETMISR-GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFC 633
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTI 273
G E+A ++ EM KG D DV AYN + + G P K+L M KPDT+
Sbjct: 634 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTV 693
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
S+N ++ K + +D+A +V+E +E++ GCSP+ T+ + I+ LCG +A KVFKE
Sbjct: 694 SHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKE 753
Query: 333 SVMVHKIPDFNTVKLLVEGL 352
+ PD + +L+E +
Sbjct: 754 IDRLKLSPDPHAFNVLLEAI 773
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N+LL + +++ + +F + + + PD +SY +L+ C +A +L +M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDP 253
+ TY LN L ++G +A+ ++ EM G DV Y+ I +
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
++ EL + M G +P+ ++YN L+ CK DEA +++ + E GC P+ T+ T
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+Y C G ++A +VF E V PD L++G + K EAK + + +
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVM 683
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + A + + QM +L +V ++NA L R +++E+
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAA- 546
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD I+Y L+ + D+A EL M ++G VTY +L+ L K+ +EA
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYNFL 278
L+ +M ++G D D Y T YG G E+ E+ DEM G PD ++YN L
Sbjct: 607 HELFRKMVERGCDPDRVTYT---TLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + + EAK++++ + C P+ + I L + D A +VF+ H
Sbjct: 664 LKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHG 723
Query: 339 I-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
PD T L+ GL ++++ EA V + I + K P+
Sbjct: 724 CSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 116/241 (48%), Gaps = 8/241 (3%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ F + V ++N LL R R + +F+++ + + P+ +Y +L+
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ-GVVPNGFTYAVLV 171
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+S C +SD+A+ EM +KG + ++ Y V CL G E R++ +K V
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 236 LDVAAYNVRITNTYGGDPE-RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+++ + N D +L M +G KPD Y++++ +CK E +DEA K+
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291
Query: 295 YEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAY---KVFKESVMVHKIPDFNT-VKLLV 349
+ + +P N + ++ LC SG ++A+ + +ES+ + P ++ ++LL+
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQ-PVYDMLIRLLI 350
Query: 350 E 350
E
Sbjct: 351 E 351
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 45/307 (14%)
Query: 113 FDHAMRTFDQMD-ELGTPRSVISFNALLFACTRSRLYDKVPILFDEI-PKKYNLSPDKIS 170
D A + F +M E P + +++ A L +S K+ F+ + +LS +
Sbjct: 285 LDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKS---GKIEQAFEACRTMQESLSSSQPV 341
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L++ +SG DKA E E+ + ++ ++ T +V+ L K G + A L M
Sbjct: 342 YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMI 401
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEM-------------------------- 263
K+G D+A +++ I D + +E + M
Sbjct: 402 KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKK 461
Query: 264 ------------RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ PD +SY+ L+ +CK + + A+K+Y+ + + C PN TT+
Sbjct: 462 VHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 521
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKK 370
++ L G A V++E V PD T L+ G +K +A + T I +
Sbjct: 522 AFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR 581
Query: 371 KFPPNVL 377
PN +
Sbjct: 582 GCRPNAV 588
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 187/396 (47%), Gaps = 39/396 (9%)
Query: 6 HIRRLCTATTAAGSSTTASSISVSKA-------------------KSKLRSEFDPDKALD 46
H R TA +AA + T ++ S+ ++ S + + DP +L
Sbjct: 8 HHHRFSTAISAAIVANTTTTPSLPQSYKIQPPIKPWPHRLNPKLLSSLISRQHDPHFSLQ 67
Query: 47 IYSSVSKHYASPVSSR-YAQDLTVRRLAKSKRFSDIETLIESHKNDPK--ITQEPYLCNL 103
I+ H+ P S +L+K + FS+IE+L+ ++ P +EP + +
Sbjct: 68 IFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSEIESLLAGLRSSPPHCCGEEP-IVTV 126
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
IR YG AG A++TF +++ G SV S NALL + +++ Y ++F +++
Sbjct: 127 IRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFR 186
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P+ +S +LLK+ C + A+++L+EM G+ V+YTTVL +G+ + A
Sbjct: 187 VLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAM 246
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR------DAGLKPDTISYNF 277
+++ E+ +G DV +Y V + RL +L+D +R D G++P+ ++Y
Sbjct: 247 KVFREVLDRGWSPDVTSYTVLVDGFC-----RLGKLVDAIRVMDIMEDNGVEPNEVTYGV 301
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ YCK + EA + E + + + LC GN +KA ++++ ++
Sbjct: 302 MIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWR--MVSR 359
Query: 338 KIPDFN---TVKLLVEGLVKKKKIKEAKGVIRTIKK 370
K N V L+ L KK K+ EA+ V K
Sbjct: 360 KNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGK 395
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G D AM+ F ++ + G V S+ L+ C +L D + ++ +I + + P+++
Sbjct: 240 GDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVM--DIMEDNGVEPNEV 297
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+YG++++++C S +A+ L+ +M K + V + V++ L ++GN E+A +W +
Sbjct: 298 TYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMV 357
Query: 230 EKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+K L+ A + + G + + DE G ++YN L+ C+
Sbjct: 358 SRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEF-GKGSVASLLTYNTLIAGLCEGGE 416
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ EA ++++ + E G +PNA T+ I C GN + +V +E + +P+ +T +
Sbjct: 417 LCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTI 476
Query: 348 LVEGLVKKKKIKE 360
L++G++ +K+
Sbjct: 477 LIDGILLLGGMKQ 489
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 5/169 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A FD+ + G+ S++++N L+ + L+D++ +K
Sbjct: 373 LIHWLCKKGKVLEARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEK- 430
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN-CLYKQGNAEE 221
++P+ +Y +L+K C G++ + + +L EM TYT +++ L G +E
Sbjct: 431 GVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQE 490
Query: 222 AERLWSEMEKKGVDLDVAAYNVR--ITNTYGGDPERLKELIDEMRDAGL 268
++ S GVD D+ V+ + N GG+ E + L++ + L
Sbjct: 491 INKVVSLAMSTGVDADLWNIFVKPVVGNDNGGEAELDRILLENKAEPAL 539
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
SS+ +H +P + Y ++ VR L R + ++ + L+ ++
Sbjct: 141 SSMLRHGVAP--NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198
Query: 109 QAGMFDHAMRTFDQMDELGTPR-SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+AG D A R M E G + ++++FN+++ ++ + +FDE+ ++ L+PD
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPD 257
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+SY LL +C G ++L + +EM +G+ VT+T++++ K GN E+A L +
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 228 EMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
+M ++G+ ++ + I G + ++EMR G++P + YN L+ YCK
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
MD A+++ +E P+ T+ T I C GN D A+++ ++ + +PD T
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437
Query: 347 LLVEGLVKKKKIKEA 361
L+ GL ++K++ +A
Sbjct: 438 SLIRGLCEEKRLNDA 452
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G ++ F +M + G V++F +L+ A ++ ++ L ++ ++
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RER 322
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L +++++ L+ C G D AL + EM G++ + V Y ++N K G + A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EME K V DV Y+ I+ G+ + +L +M G+ PD I+Y+ L+
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ + +++A +++E + + G P+ T+ T I C GN +KA + E + +PD
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T +L+ GL K + KEA ++ + + P
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 52/287 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I Y + G D A + +M + G I++++L+ C RL D LF+ + +
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE-LFENM-LQ 461
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD+ +Y L+ HC G+ +KAL L +EM KGV VTY+ ++N L K +E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A RL ++ Y DP PD I Y+ LM C
Sbjct: 522 AHRLLFKL-------------------YHEDP---------------VPDNIKYDALMLC 547
Query: 282 ---------------YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+C +M EA KVY+ + + + + + I+ C GN KA
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 607
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
K+ + P+ + LV GL ++ + EA I+ + P
Sbjct: 608 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 165/340 (48%), Gaps = 5/340 (1%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
IS S ++ E DP +ALDI++ S+ + + + L + K+F ++ ++
Sbjct: 55 ISHESTVSLMKRERDPQRALDIFNKASQQKGFN-HNNATYSVLLDNLVRHKKFLAVDAIL 113
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFACTR 144
K + QE NL+R + + + D M F+ + + + S+ + + L
Sbjct: 114 HQMKYETCRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLID 173
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV-TT 203
S D L L P+ + +L+K HC +G D A ++ EM+ G+ +
Sbjct: 174 SGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNS 233
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLKELID 261
+TY+T+++CL+ Q ++EA L+ +M K+G+ D +NV I G+ ER K ++D
Sbjct: 234 ITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILD 293
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M+ G P+ +Y+ LM +CK + EAK+V++ +++ G + + T + LC +G
Sbjct: 294 FMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNG 353
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
D+A K+ E D T +++ GL + + +EA
Sbjct: 354 EIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEA 393
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 117/239 (48%), Gaps = 2/239 (0%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D + + G + FN ++ RS ++ ++ D + KK +P+ +Y L+ C
Sbjct: 258 DMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFM-KKNGCNPNVYNYSALMNGFCK 316
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G +A ++ +E++ G+++ TV YTT++NCL + G +EA +L EM+ D
Sbjct: 317 EGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALT 376
Query: 241 YNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YNV + + G E +++D+ G+ + SY ++ C N +++A K +
Sbjct: 377 YNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 436
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+ G P+ T+ + LC SGN + +V + + IP + +VE + K++K+
Sbjct: 437 KRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKL 495
>gi|86438766|emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Brachypodium
sylvaticum]
Length = 289
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 122/217 (56%), Gaps = 1/217 (0%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
AG+ S S + ++++E +P + +++ + + H V +R+A V RL+ ++
Sbjct: 70 AGAEDKGSRDSETPLLVRIKNERNPKRLYELFRA-NAHNRLLVENRFAFQDAVARLSGAR 128
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
R +E ++E HK P+ +E ++ +I YG+A M +HA+RTF +M+ G + SFN
Sbjct: 129 RNDLVEEILEQHKALPQGRREGFVVRIIGLYGKARMPEHALRTFQEMEMYGCTCTNKSFN 188
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
A L +++L+DK LF+E P KY + D ISY ++K CD G A ++ EME
Sbjct: 189 ATLKVLMQAQLFDKALQLFEEGPGKYGVELDDISYNTVVKMMCDMGQLRAAYRVMQEMEK 248
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
+G++ +TYTT++ YK G E + LW+ M +G
Sbjct: 249 EGIQPDVITYTTLMAAFYKNGQREVGDGLWNLMRLRG 285
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 180/356 (50%), Gaps = 5/356 (1%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
S+S L+SE +P A ++ S ++H S+ + +RRL++++ + + +
Sbjct: 7 SLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHI-LRRLSETRMVNHVSRI 65
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISFNALLFACT 143
+E ++ E ++I++YG+ M D A+ F +M E+ G ++ S+N LL A
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
++ + KV LF ++P+ +Y +L+K C +KA L+ M +G +
Sbjct: 126 EAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDE 262
+Y+TV+N L K G ++A L+ EM ++GV DV YN+ I D + EL D
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 263 -MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+ D+ + P+ ++N +++ K +D+ K++E +++N + T+ + I+ LC +G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
N DKA VF E D T ++ G + KIKE+ + R ++ K N++
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIV 360
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 154/377 (40%), Gaps = 47/377 (12%)
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
++ + L+K R D + E K + + +LI AG D A F+++D
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 125 ELGTPRSVISFNALLFA-CTRSRLYDKVPIL--------------------------FDE 157
E V+++N +L C ++ + + + DE
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDE 377
Query: 158 IPKKYNLSP------DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ L P DK +YG+ + C +G +KAL ++ E+E+ G + Y ++++
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKE---LIDEMRDA 266
CL K+ EEA L EM K GV+L+ N I GG RL E + EM
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI----GGLIRDSRLGEASFFLREMGKN 493
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G +P +SYN L+ CK EA + + ENG P+ T+ + LC D A
Sbjct: 494 GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLA 553
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEE 386
+++ + + D +L+ GL K+ +A V+ ++ + L + + E
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 387 LGLVPAPAVGDGQKARV 403
VGD +A V
Sbjct: 614 F-----FKVGDSNRATV 625
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 135/272 (49%), Gaps = 8/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +AG D A+ FD+M E G V +N L+ + + + L+D + +
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ ++ +++ G D L++ M+ E TY+++++ L GN ++A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLK--PDTISYNFL 278
E +++E++++ +DV YN + GG ++KE ++ R K + +SYN L
Sbjct: 310 ESVFNELDERKASIDVVTYNTML----GGFCRCGKIKESLELWRIMEHKNSVNIVSYNIL 365
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +N +DEA ++ + G + + TT+ +I+ LC +G +KA V +E
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D +++ L KKK+++EA +++ + K
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 109/256 (42%), Gaps = 16/256 (6%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-----LIRS--YGQAGMFDH 115
YA + L K KR + L++ + + ++CN LIR G+A F
Sbjct: 430 YAYASIIDCLCKKKRLEEASNLVKE-MSKHGVELNSHVCNALIGGLIRDSRLGEASFF-- 486
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+M + G +V+S+N L+ ++ + + E+ + PD +Y +LL
Sbjct: 487 ----LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN-GWKPDLKTYSILL 541
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C D ALEL ++ G+E + + +++ L G ++A + + ME +
Sbjct: 542 CGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 236 LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++ YN + + GD R + M GL+PD ISYN +M C + A +
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 295 YEGLEENGCSPNATTF 310
++ +G P T+
Sbjct: 662 FDDARNHGIFPTVYTW 677
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG F A +M E G + +++ LL R R D L+ + +
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQS- 563
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D + + +L+ C G D A+ ++ ME++ VTY T++ +K G++ A
Sbjct: 564 GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+W M K G+ D+ +YN + E D+ R+ G+ P ++N L+
Sbjct: 624 TVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 11/348 (3%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSV-SKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
A S+S + L+ P KAL + V +K + S + L + L +S+ +
Sbjct: 90 APSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYF---LMIEILGRSRNLNAA 146
Query: 82 ETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
IE + + +LIRSYG AG+F +++ F M E+G SV++FN+L
Sbjct: 147 RNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSL 206
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L + LFDE+ Y ++PD ++ +L++ C + D+ EM
Sbjct: 207 LSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFK 266
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRITN-TYGGDPER 255
+ VTY T+++ L + G + A + M KK +L +V Y I D
Sbjct: 267 CDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAE 326
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL-EENGCSPNATTFRTWI 314
L+ EM GLKP+ I+YN L+ C+ + +D+ K++ EG+ + G P+ T T I
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C G ++A+ VF++ + PD T +LV L ++ + A+
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAE 434
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LIR Y A+ +M G + I++N L+ ++ DK+ + + +
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD + L+K+HC G ++A + +M V+ + TY+ ++ L ++G+
Sbjct: 373 GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRR 432
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
AE + E+ +K + L D G KP +YN +
Sbjct: 433 AEEFFDELAEKEILL---------------------------HDVGCKPLVAAYNPMFEY 465
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N +A++V+ L + G + + +++T I C G + + + + +PD
Sbjct: 466 LCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 524
Query: 342 FNTVKLLVEGLVKK 355
T L+++GL+KK
Sbjct: 525 AETYGLMIDGLLKK 538
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK---GVDLDVAAYN 242
KAL +E KG +Y ++ L + N A +EKK V L +N
Sbjct: 110 KALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169
Query: 243 VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLE 299
I +YG G + ++ M++ G+ P +++N L++ K AK+++ E L+
Sbjct: 170 SLI-RSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
G +P+ TF I C + D+ + FKE PD T LV+GL + K+K
Sbjct: 229 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 288
Query: 360 EAKGVIRTIKKKFP---PNVL 377
A V++ + KK P PNV+
Sbjct: 289 IAHNVVKGMVKKSPNLSPNVV 309
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
SS+ +H +P + Y ++ VR L R + ++ + L+ ++
Sbjct: 141 SSMLRHGVAP--NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC 198
Query: 109 QAGMFDHAMRTFDQMDELGTPR-SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+AG D A R M E G + ++++FN+++ ++ + +FDE+ ++ L+PD
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPD 257
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+SY LL +C G ++L + +EM +G+ VT+T++++ K GN E+A L +
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317
Query: 228 EMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
+M ++G+ ++ + I G + ++EMR G++P + YN L+ YCK
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
MD A+++ +E P+ T+ T I C GN D A+++ ++ + +PD T
Sbjct: 378 RMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYS 437
Query: 347 LLVEGLVKKKKIKEA 361
L+ GL ++K++ +A
Sbjct: 438 SLIRGLCEEKRLNDA 452
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G ++ F +M + G V++F +L+ A ++ ++ L ++ ++
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER- 322
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L +++++ L+ C G D AL + EM G++ + V Y ++N K G + A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EME K V DV Y+ I+ G+ + +L +M G+ PD I+Y+ L+
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ + +++A +++E + + G P+ T+ T I C GN +KA + E + +PD
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T +L+ GL K + KEA ++ + + P
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 52/287 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I Y + G D A + +M + G I++++L+ C RL D LF+ + +
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE-LFENM-LQ 461
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD+ +Y L+ HC G+ +KAL L +EM KGV VTY+ ++N L K +E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A RL ++ Y DP PD I Y+ LM C
Sbjct: 522 AHRLLFKL-------------------YHEDP---------------VPDNIKYDALMLC 547
Query: 282 ---------------YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+C +M EA KVY+ + + + + + I+ C GN KA
Sbjct: 548 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 607
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
K+ + P+ + LV GL ++ + EA I+ + P
Sbjct: 608 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 165/317 (52%), Gaps = 10/317 (3%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A L + LAK +++ + L+ + + + E + C ++R Y +A D A+ TF+ M
Sbjct: 80 AYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNVETF-CIMMRKYARANKVDEAVYTFNVM 138
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
D+ ++ +FN LL A +S K +FD + ++ PD+ SY +LL+ + +
Sbjct: 139 DKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQF--VPDEKSYSILLEGWGKAPN 196
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+A E+ EM G + VTY +++ L K G +EA + EM+ Y+V
Sbjct: 197 LPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSV 256
Query: 244 RITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ +TYG + R+++ ID EM G+K D ++YN L+ +CK +V + +E
Sbjct: 257 -LVHTYGVE-HRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMES 314
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NG +PN+ T I + G G D+A++VF + + + PD +T ++++ +K +++
Sbjct: 315 NGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKLCE-PDADTYTMMIKMFCEKNELEM 373
Query: 361 AKGVIRTIK-KKFPPNV 376
A + + +K K+F P++
Sbjct: 374 ALKIWKYMKSKQFVPSM 390
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMD-ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N+++ + AGM A R F+ + + G S+ +++ ++ + + R Y V L + K
Sbjct: 49 NVLKRFENAGM--PAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVWDLVSAMRK 106
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L+ + ++ ++++ + + D+A+ N M+ V + +L+ L K N
Sbjct: 107 KGMLNVE--TFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGLLSALCKSNNVR 164
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+A+ ++ M+ + V PD SY+ L+
Sbjct: 165 KAQEIFDAMKGQFV-----------------------------------PDEKSYSILLE 189
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ K + A++V+ + E GC P+ T+ + LC +G D+A +V KE
Sbjct: 190 GWGKAPNLPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKE 241
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 3/197 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG + A+ TF +M + G V+++NAL+ A + + V + E+
Sbjct: 257 LVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESN- 315
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P+ + +++ S G +D+A + M K E TYT ++ ++ E A
Sbjct: 316 GVAPNSRTCNVIISSMIGQGQTDRAFRVFCRM-IKLCEPDADTYTMMIKMFCEKNELEMA 374
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTC 281
++W M+ K + ++ I D + +++EM + G++P I++ L
Sbjct: 375 LKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQL 434
Query: 282 YCKNEMMDEAKKVYEGL 298
K D K ++E +
Sbjct: 435 LIKEGREDVLKFLHEKM 451
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 6/194 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
D+A+++ + P S Y+ + V R D I+T +E K K Y
Sbjct: 233 DEAVEVVKEMDVGNCRPTSFIYS--VLVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYN 290
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI ++ + F + R +M+ G + + N ++ + D+ +F + K
Sbjct: 291 A-LIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIK 349
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD +Y +++K C+ + AL++ M++K + T++ ++ L ++ NA
Sbjct: 350 L--CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAA 407
Query: 221 EAERLWSEMEKKGV 234
+A + EM +KG+
Sbjct: 408 KACVVMEEMIEKGI 421
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS--YGQAGMFDHAMRTFD 121
A + + K +F ++ +++ +++ + CN+I S GQ G D A R F
Sbjct: 288 AYNALIGAFCKVNKFKNVHRVLKEMESN-GVAPNSRTCNVIISSMIGQ-GQTDRAFRVFC 345
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M +L P + + C ++ L + I + K P ++ L+K C+
Sbjct: 346 RMIKLCEPDADTYTMMIKMFCEKNELEMALKIW--KYMKSKQFVPSMHTFSALIKGLCEK 403
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
++ KA ++ EM KG+ + +T+ + L K+G + + L +M
Sbjct: 404 DNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKM 451
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 11/348 (3%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSV-SKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
A S+S + L+ P KAL + V +K + S + L + L +S+ +
Sbjct: 90 APSLSKTTVLQTLQLIRTPAKALHFFRWVEAKGFTHNEQSYF---LMIEILGRSRNLNAA 146
Query: 82 ETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
IE + + +LIRSYG AG+F +++ F M E+G SV++FN+L
Sbjct: 147 RNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSL 206
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L + LFDE+ Y ++PD ++ +L++ C + D+ EM
Sbjct: 207 LSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFK 266
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRITN-TYGGDPER 255
+ VTY T+++ L + G + A + M KK +L +V Y I D
Sbjct: 267 CDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAE 326
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL-EENGCSPNATTFRTWI 314
L+ EM GLKP+ I+YN L+ C+ + +D+ K++ EG+ + G P+ T T I
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C G ++A+ VF++ + PD T +LV L ++ + A+
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAE 434
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 28/254 (11%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LIR Y A+ +M G + I++N L+ ++ DK+ + + +
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD + L+K+HC G ++A + +M V+ + TY+ ++ L ++G+
Sbjct: 373 GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRR 432
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
AE + E+ +K + L D G KP +YN +
Sbjct: 433 AEEFFDELAEKEILL---------------------------HDVGCKPLVAAYNPMFEY 465
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N +A++V+ L + G + + +++T I C G + + + + +PD
Sbjct: 466 LCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 524
Query: 342 FNTVKLLVEGLVKK 355
T L+++GL+KK
Sbjct: 525 AETYGLMIDGLLKK 538
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK---GVDLDVAAYN 242
KAL +E KG +Y ++ L + N A +EKK V L +N
Sbjct: 110 KALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169
Query: 243 VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLE 299
I +YG G + ++ M++ G+ P +++N L++ K AK+++ E L+
Sbjct: 170 SLI-RSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLD 228
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
G +P+ TF I C + D+ + FKE PD T LV+GL + K+K
Sbjct: 229 TYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 288
Query: 360 EAKGVIRTIKKKFP---PNVL 377
A V++ + KK P PNV+
Sbjct: 289 IAHNVVKGMVKKSPNLSPNVV 309
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 26/344 (7%)
Query: 6 HIRRLCTATTAAGSSTTASSI------SVSKAKSKLRSEFDPD--------------KAL 45
H+ R A +T A + ++S+A +K R + P+ KAL
Sbjct: 25 HLPRDAVNIAEASDATIAKLVLESDPRTLSEALTKPRIHWTPELVNKTLKRLWNHGPKAL 84
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIR 105
+ + +H S S + D V A+ + F+ L+ ++ L L
Sbjct: 85 LFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAE 144
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
Y G A+RTF M E G + + SFN LL +S + L + ++
Sbjct: 145 RYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFR-- 202
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +SY +L +C + AL +L EM +G+E T VTY T+L ++ +EA
Sbjct: 203 PDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEF 262
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+ EM+K+ ++DV +Y + + +G G+ ++ K + DEM G+ P+ +YN L+ +C
Sbjct: 263 YLEMKKRKCEIDVVSYTT-VIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFC 321
Query: 284 KNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKA 326
K + + A V+E + G CSPN TF I LC G+ ++A
Sbjct: 322 KKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERA 365
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
+I +G+AG A R FD+M + G +V ++NAL+ C + + + V + F+E+ ++
Sbjct: 281 VIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAV-FEEMVRE 339
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ +++ ++++ C G ++AL + M G+ + TY V+ G E+
Sbjct: 340 GVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEK 399
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY----GGDPERLKELIDEMRDAGLKPDTISYNF 277
++ +M ++ YNV I+ + D +L+ EM + G P ++N
Sbjct: 400 GLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNR 459
Query: 278 LMTCYCKNEMMDEAKKV 294
++ D AK +
Sbjct: 460 VLNGLVITGNQDFAKDI 476
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 116/318 (36%), Gaps = 48/318 (15%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN--LIRSYGQAGMFDHAMRTFD 121
A D T+ +L SD TL E+ P+I P L N L R + A+ F
Sbjct: 36 ASDATIAKLVLE---SDPRTLSEA-LTKPRIHWTPELVNKTLKRLWNHG---PKALLFFK 88
Query: 122 QMDEL--GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
+D S SF+ + R R ++ L + + L P + +L + +
Sbjct: 89 HLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRM-RSLRLGPSPKTLAILAERYA 147
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G +A+ M G+ ++ T+L+ L K E A L ++ +
Sbjct: 148 SIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR------- 200
Query: 240 AYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+PDT+SYN L YC + A +V + +
Sbjct: 201 ----------------------------FRPDTVSYNILANGYCLKKRTPMALRVLKEMV 232
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ G P T+ T + S +A++ + E D + ++ G + ++K
Sbjct: 233 QRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVK 292
Query: 360 EAKGVI-RTIKKKFPPNV 376
+AK V +K+ PNV
Sbjct: 293 KAKRVFDEMVKEGVAPNV 310
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 185/390 (47%), Gaps = 43/390 (11%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVS-KHYASPVS-SRYAQDLTVRRLAKSKRFSDIET 83
I+ + S LR + DP AL ++ + + K + P S + DL + +L ++K F++++
Sbjct: 7 ITPFRLASLLRLQKDPKLALQLFKNPNPKTPSKPFRYSLLSYDLIITKLGRAKMFNEMQE 66
Query: 84 LIESHKNDPKIT-QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC 142
++ K + T +E C++I YG+A + ++A++ ++ R+V S+N+LL
Sbjct: 67 ILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLSVF 126
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
+ +DK+ LF I K D +Y LL++ C SG D A ++ +EM N+GV
Sbjct: 127 LMCKDFDKMRELFVGIEKLG--KADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPN 184
Query: 203 TVTYTTVLN--CLY----------------------------------KQGNAEEAERLW 226
+T+ ++ CL+ K G A RL
Sbjct: 185 VITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYASLIKGVCKNGELSLAFRLK 244
Query: 227 SEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
EM + ++LD A Y+ I+ + G E + ++M++ G KPDT++YN ++ +CK+
Sbjct: 245 KEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCKD 304
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+ + A ++ + + E GC P+ ++ + L G +A +F++ PD +
Sbjct: 305 KDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVSY 364
Query: 346 KLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
++L +G + KEA ++ I K F P
Sbjct: 365 RILFDGFCNGMQFKEAAFILDEMIFKGFVP 394
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 129/271 (47%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LIR + +G D A + FD+M G +VI+F L++ C RL + + D + K
Sbjct: 156 LIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMV-KV 214
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + P+ Y L+K C +G A L EM +E+ Y+T+++ L+K G EE
Sbjct: 215 YRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEE 274
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLM 279
A +W +M+++G D YNV I N + D E L+DEM + G KPD ISYN ++
Sbjct: 275 ALGVWEDMKERGYKPDTVTYNV-IINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVIL 333
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ EA ++E + GC+P+ ++R C F +A + E + +
Sbjct: 334 RELFEEGKRGEANDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFV 393
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P ++ V L + K + T++K
Sbjct: 394 PCSASICKFVNRLCEGKNEDLLRSAFNTLEK 424
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 8/292 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL--GTP 129
LAK F L++ + + +IR Y +AGM A F +M+E G P
Sbjct: 149 LAKHHHFPLARHLLDEMRERSIPVSSQVILAIIRRYVRAGMSPEASELFRRMEEYGAGVP 208
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ +LL A ++ RL + LFD K PD + Y L+ + C +G DKA +
Sbjct: 209 DPAV-LASLLGALSKKRLAGEAQALFDSY--KSVFPPDVVLYTTLVHAWCRAGCLDKAEQ 265
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNT 248
+ EM+ G+ TYT+V++ +Y+ G A+ L +M + G + A +N + +
Sbjct: 266 VFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQELLCQMMETGCPPNTATFNAIMRAHV 325
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC--KNEMMDEAKKVYEGLEENGCSPN 306
G E++ ++ ++MR G PD I+YNFLM +C +D A KV + GC P+
Sbjct: 326 KAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPD 385
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
TF + + G+GN + A ++++ + P+ T LL++ K+K +
Sbjct: 386 CHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSM 437
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 134/268 (50%), Gaps = 9/268 (3%)
Query: 72 LAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
L+K + + + L +S+K+ P + L+ ++ +AG D A + F +M + G
Sbjct: 220 LSKKRLAGEAQALFDSYKSVFPPDVV---LYTTLVHAWCRAGCLDKAEQVFAEMQQAGIM 276
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+V ++ +++ A R+ + L ++ + P+ ++ ++++H +G S++ L+
Sbjct: 277 PNVYTYTSVIDAMYRAGQVPRAQELLCQM-METGCPPNTATFNAIMRAHVKAGRSEQVLQ 335
Query: 190 LLNEMENKGVEVTTVTYTTVL--NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ N+M G + +TY ++ +C Q N + A ++ ++M KG D +N +
Sbjct: 336 VHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKL 395
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G G+ E + L + M++ KP+ ++YN LM + K + MD ++ + ++ G PN
Sbjct: 396 VLGTGNVEAARRLYERMQELQCKPNVVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPN 455
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESV 334
T+ I CG GN+ +A+ +E V
Sbjct: 456 VNTYGALIESFCGRGNWRRAHATLREMV 483
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 163/347 (46%), Gaps = 41/347 (11%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + K + FS +E +++ K D + + LI + G + + FD+
Sbjct: 241 YTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDE 300
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M E G + + +L+ R + +LFDE+ +K L P +YG L+ C G
Sbjct: 301 MRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEK-GLLPSSHTYGALIDGVCKVG 359
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
A L+NEM++KGV +T V + T++N ++G +EA ++ MEKKG DV N
Sbjct: 360 EMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCN 419
Query: 243 --------------------------VRI-TNTYG---------GDPERLKELIDEMRDA 266
VR+ T +Y G+ E K L EM
Sbjct: 420 TIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 479
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
++P+ I+YN ++ YCK + EA+K++ ++ NG P++ T+ + I+ C + N D+A
Sbjct: 480 EVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEA 539
Query: 327 YKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIKKK 371
++F E M K D N+V +++ GL K K EA G+ IK+K
Sbjct: 540 MRLFSE--MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRK 584
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS 145
E ITQ + LI Y + GM D A +D M++ G V + N + R
Sbjct: 370 EMQSKGVNITQVVF-NTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRL 428
Query: 146 RLYDKV-PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
+ YD+ LF + LS +SY L+ +C G+ ++A L EM +K V+ +
Sbjct: 429 KRYDEAKQWLFRMMEGGVRLST--VSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAI 486
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEM 263
TY ++ KQG +EA +LW+ M+ G+D D Y I D + L EM
Sbjct: 487 TYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM 546
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
GL ++++Y +++ K DEA +Y+ ++ G + + + I
Sbjct: 547 GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 67/328 (20%)
Query: 71 RLAKSKRFSDIETLIESHKNDP----------------KITQEPY-----LCNLI-RSYG 108
RL ++RFS++ L+ S ND I++E + +L+ R Y
Sbjct: 87 RLYSNRRFSEMRLLLNSVVNDGFYERPVEGLGSAMVDCDISEEKFEFWEKFFDLVFRVYV 146
Query: 109 QAGMFDHAMRTFDQMDELGTP---RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
GMF+ +R FD M + G RS I F L+ A R R+
Sbjct: 147 DNGMFEEGLRVFDYMVKKGLSIDERSCIVF--LVAAKKRRRI------------------ 186
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
D LE M + GV++T + T V+ L ++G E++++L
Sbjct: 187 -------------------DLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKL 227
Query: 226 WSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
E KG+ + YN I N Y D +++++ M+ G+ + ++Y L+
Sbjct: 228 IKEFSGKGIKPEAYTYNT-IINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSV 286
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
KN M++ +K+++ + E G + + + I C GN +A+ +F E +P +
Sbjct: 287 KNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSH 346
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++G+ K ++ A+ ++ ++ K
Sbjct: 347 TYGALIDGVCKVGEMGAAEILMNEMQSK 374
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 154/310 (49%), Gaps = 13/310 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+R+L ++ + E ++E K P + C LIR + ++G F D+M E
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSH---CLLIRGFFKSGSFQRGCSQLDRMLE 57
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G + I +N L+ ++ + + +P+ + +P+ +SY +++ +C + + +
Sbjct: 58 AGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQ--HCAPNVVSYNIIIDGYCKARNIE 115
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
KAL L EME G T Y++++ K GN +A +++EM KG + D+ +NV +
Sbjct: 116 KALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLL 175
Query: 246 TNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ + +EL M G KPD ++YN ++ CK + +DEA + E +++ S
Sbjct: 176 SGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 235
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFK---ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P T+ T I HLC +AY+VF+ E P + +V +L+ GL K ++ EA
Sbjct: 236 PTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAY-SVLILINGLCKARRPGEA 294
Query: 362 KGVIRTIKKK 371
K + + ++ +
Sbjct: 295 KEMFQEMRGR 304
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++++S+ + G AM F +M G +++FN LL R+R + LF + +
Sbjct: 138 SIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSR 197
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++Y ++ C D+A+ LL M+ + V T VTYTT+++ L K ++
Sbjct: 198 -GCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQ 256
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNT---YGGDPERLKELIDEMRDAGLKPDTISYN-- 276
A ++ +M + AY+V I P KE+ EMR G+ P ++YN
Sbjct: 257 AYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTL 316
Query: 277 ---------------------------------FLMTCYCKNEMMDEAKKVYEGLEENGC 303
L++ CK + ++EA K+ + + G
Sbjct: 317 LEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF 376
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ + + L +G D A++++KE ++ + +L++G++++ + EAK
Sbjct: 377 VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 436
Query: 364 VIRTI 368
++ +
Sbjct: 437 FLKQM 441
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 45/241 (18%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K SPD S+ LL++ SGS + L+ M G+ + Y +++CL K G
Sbjct: 21 KYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGML 80
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EAE M + P+ +SYN ++
Sbjct: 81 AEAESYLKRMPQH-----------------------------------CAPNVVSYNIII 105
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YCK +++A +EE G P + + + C +GN KA VF E
Sbjct: 106 DGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCE 165
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV---------LRAWKKVEEELGL 389
PD +L+ GL + +KI EA+ + R++ + P+V L WKK++E + L
Sbjct: 166 PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFL 225
Query: 390 V 390
+
Sbjct: 226 L 226
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 14/268 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ + + + SP Y + L K R + E P EP
Sbjct: 220 DEAVFLLERMKQEDVSPTFVTYTT--LIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYS 277
Query: 102 NLIRSYG--QAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYDKVPI---LF 155
LI G +A A F +M G +V+++N LL + ++L D + + +
Sbjct: 278 VLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFML 337
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D++P +P+ +Y +L+ S C + ++A +LL+ M +KG + + +L+ L +
Sbjct: 338 DQVP-----APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLAR 392
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTIS 274
G ++A L+ EM + V + N+ + G + K+ + +M D G+ PD +
Sbjct: 393 AGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFT 452
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENG 302
Y+ L+ C D+A+K+ E L +G
Sbjct: 453 YDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 6/295 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +++ S++ P Y + + L K K+ + L+E K +
Sbjct: 186 EARELFRSMNSRGCKPDVVTY--NTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF--ACTRSRLYDKVPILFDEIPK 160
LI + A F++M E P + +++ L+ ++R + +F E+ +
Sbjct: 244 LIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEM-R 302
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP ++Y LL+ + A+EL M ++ TY +++ L K E
Sbjct: 303 GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVE 362
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA +L S M KG + + V ++ G + EL EM + S N L+
Sbjct: 363 EAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILL 422
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ +DEAK + + + G P+ T+ + LC G D+A K+ +E V
Sbjct: 423 DGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELV 477
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 176/354 (49%), Gaps = 5/354 (1%)
Query: 12 TATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRR 71
T++T + IS A + ++ E DP AL+I++ V + + L + +
Sbjct: 43 TSSTLVETGRKCKFISHESAINLIKREKDPQHALEIFNMVGEQKGFNHNHATYSTL-IHK 101
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR- 130
LA++K+F ++ L+ + E NL++ + ++ + + + F + + +
Sbjct: 102 LAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKP 161
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
S+ + + L S+ D + + + P+ + +L+K HC SG + ALE+
Sbjct: 162 SLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESALEV 221
Query: 191 LNEME-NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITN- 247
++EM+ ++ +TY+T+++ L G +EA L+ EM K L D Y+V I
Sbjct: 222 MHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGF 281
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+GG +R +++++ MR G P+ +Y+ LM +CK ++EAK+V++ ++ +G P+
Sbjct: 282 CHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDT 341
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ T I CG G D+A ++ KE + D T +L++GL ++ + EA
Sbjct: 342 VGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEA 395
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ + G D A + + M G +V +++ L+ C RL ++ +FDE+ K
Sbjct: 277 LIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRL-EEAKEVFDEM-KS 334
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD + Y L+ C G D+A+ELL EM + VT+ +L L ++G +E
Sbjct: 335 SGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDE 394
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ + +GV L+ +Y + + G+ E+ L+ M G P + N L+
Sbjct: 395 ALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLV 454
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
C C+ M+D A GL + G +P ++ I ++C
Sbjct: 455 CLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYIC 492
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRS---VISFNALLFA-CTRSRLYDKVPILFDEI 158
L++ + ++G + A+ +M + + RS VI+++ L+ C RL + + LF+E+
Sbjct: 205 LVKHHCKSGDLESALEVMHEMKK--SRRSYPNVITYSTLIDGLCGNGRLKEAIE-LFEEM 261
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + PD ++Y +L+K C G +D+A +++ M + G + Y+ ++N K+G
Sbjct: 262 VSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGR 321
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
EEA+ ++ EM+ G+ D Y I G G + EL+ EM + K D +++N
Sbjct: 322 LEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNV 381
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT------------------------- 312
L+ C+ DEA ++ E L G N ++R
Sbjct: 382 LLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRG 441
Query: 313 WIYH----------LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
++ H LC +G D A + P+ + L+E + +++K+
Sbjct: 442 FVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKL 497
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 133/260 (51%), Gaps = 7/260 (2%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +L L+R G A +++M G VI+++ L+ + +R +D+ L
Sbjct: 194 TYNAFLNGLMRK----GRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+ + + P+ ++Y LL C D+A EL +M +G + VTYTT+L
Sbjct: 250 FEAMISR-GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTI 273
G E+A ++ EM KG D DV AYN + + G P ++L M KPDT+
Sbjct: 309 NVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTV 368
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
S+N ++ K + +D+A +V+E +E++ GCSP+ T+ + I+ LCG +A KVFKE
Sbjct: 369 SHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKE 428
Query: 333 SVMVHKIPDFNTVKLLVEGL 352
+ PD + +L+E +
Sbjct: 429 IDRLKLSPDPHAFNVLLEAM 448
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 135/304 (44%), Gaps = 3/304 (0%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ L K+ R +L+E+ LI +A A M+
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114
Query: 128 TPR--SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
+ R S S+N+LL + +++ + +F + + ++ PD +SY +L+ C
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELG 174
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A +L +M + TY LN L ++G +A+ ++ EM G DV Y+ I
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234
Query: 246 TN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ ++ EL + M G +P+ ++YN L+ CK DEA +++ + E GC
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ T +Y C G ++A +VF E V PD L++G + K EA+ +
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQL 354
Query: 365 IRTI 368
+ +
Sbjct: 355 FQVM 358
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 8/219 (3%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV---TYTTVLNCLYKQGNAEEAE 223
+ +++ L C SG ++A E M+ T +V+ L K G + A
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEM-RDAGLKPDT-ISYNFLMT 280
L M K+G D+A +++ I D + +E + M R + + SYN L+
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 281 CYCKNEMMDEAKKVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + + +A ++ + E P+ ++ I C +A K++K+ + ++ +
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
P+ T + GL++K +I +A+GV I P+V+
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 136/265 (51%), Gaps = 2/265 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G D A+ D+M E G +V ++N L+ A + L +E+ K
Sbjct: 263 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGK- 321
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+ D +Y +L+ HC G+ KALE+ M +GV T VTYT+++ L K+G +E
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L+ E ++G+ D+ YN I +++ G+ +R E++ EM + PD ++YN LM
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +DEA+K+ + + + G P+ T+ T I G+ A ++ E + P
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR 366
T L++GL K + +A+ +++
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVK 526
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG--TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I + G A+ +M E G P + C R+ + V + FDE+
Sbjct: 191 VIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKV-FDEMLT 249
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + P+ + Y L+ +CD G D AL + M +GV +T TY +++ L+ G
Sbjct: 250 KGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGT 309
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L EM KG+ LDV YN+ I + G+ ++ E+ + M G++ ++Y L+
Sbjct: 310 EAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLI 369
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K + E K+++ G P+ + I SGN D+A+++ E
Sbjct: 370 YALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIA 429
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L+ GL ++ EA+ +I + K+
Sbjct: 430 PDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 461
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 10/273 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++R AG A+ QM PR + +++N ++ C+R R+ + I+ E+ +
Sbjct: 160 MLRHLCSAGKPARALELLRQM-----PRPNAVTYNTVIAGFCSRGRVQAALDIM-REMRE 213
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNA 219
+ ++P++ +YG ++ C G D+A+++ +EM KG V+ V Y ++ QG
Sbjct: 214 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 273
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A M ++GV + VA YN+ + + G EL++EM GL D +YN L
Sbjct: 274 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNIL 333
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + +A +++E + G T+ + IY L G + K+F E+V
Sbjct: 334 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 393
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD L+ I A ++ ++KK
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 426
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 159/317 (50%), Gaps = 7/317 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y L ++ L + + T+++ K + L R++ + G A+ F
Sbjct: 161 YTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRN 220
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+ +P + I++NA++ R D E+ ++ ++PD +Y +L+ C +
Sbjct: 221 IP---SPDA-IAYNAIIHGHCRKNDCDGALEFLKEMNER-KVAPDVFTYNILIDGLCKAS 275
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+DKA E+L+EM ++GV TVT+ ++++ L K G E A L + M ++ YN
Sbjct: 276 KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYN 335
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I+ + +R K+L+DE +G PD ++Y+ L CK +DEA ++ + +
Sbjct: 336 TLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK 395
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC+PN T+ T I LC + +KAY++ + V +PD T ++V+GL K+ ++ +A
Sbjct: 396 GCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKA 455
Query: 362 -KGVIRTIKKKFPPNVL 377
K V +K+ P+V+
Sbjct: 456 LKMVEGMLKRGCTPSVI 472
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 3/282 (1%)
Query: 90 NDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
N+ K+ + + N LI +A D A +M + G ++FN+++ ++ +
Sbjct: 253 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 312
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
++ L + ++ N P +Y L+ C + D+A +L++E + G VTY+
Sbjct: 313 ERAHSLLAVMAER-NCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSI 371
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG 267
+ + L K+G +EA L EM KG ++ YN I E+ EL++ + +G
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
PD ++Y ++ CK +D+A K+ EG+ + GC+P+ T+ + LC +G D+A+
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+FKE V D LV G K + KEA+ V+ I+
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 10/271 (3%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A +M G +++++N L+ ++ +K L + + PD ++
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS-GFVPDVVT 438
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +++ C G DKAL+++ M +G + +TYT ++ L + G +EA ++ EM
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
K D AY V + N Y R KE ++D +R P YN LM YCK
Sbjct: 499 SKDCTADALAY-VSLVNGYC-KSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGR 553
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+DE V+E + GC PN T+ + LC G D+A+ + +PD + +
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613
Query: 348 LVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+++GL K K KEA+ V+ + I+ PP+ +
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAV 644
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 123/284 (43%), Gaps = 34/284 (11%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G S + N L + D++P +F+ + +PD +Y L++KS C DK
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA-GYAPDSYTYHLVIKSLCQMNQIDK 178
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW-------------------- 226
A +L++ + +G + YT + K G ++A ++
Sbjct: 179 AFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCR 238
Query: 227 -----------SEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
EM ++ V DV YN+ I ++ E++ EM D G+ PDT++
Sbjct: 239 KNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVT 298
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+N +M CK + A + + E C P+ T+ T I LC N D+A + E V
Sbjct: 299 FNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFV 358
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+PD T +L +GL K+ +I EA +++ + K PN++
Sbjct: 359 SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 149/353 (42%), Gaps = 42/353 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A ++ +S +P Y + + L K+ + L+ES + +
Sbjct: 383 DEAFELVKEMSGKGCTPNLVTY--NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYT 440
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ + G D A++ + M + G SVI++ AL+ R+ D+ +F E+ K
Sbjct: 441 IIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Query: 162 YNLSPDKISYGLLLKSHCDS--------------------------------GSSDKALE 189
+ + D ++Y L+ +C S G D+
Sbjct: 501 -DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPN 559
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+ +M +G TY V++ L K G +EA M G DV +YN+ I +
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619
Query: 250 -GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
P+ ++++D+M AG+ PD ++YN LM +CK E D+A + + + + G P+
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKE----SVMVHKIPDFNTV--KLLVEGLVKK 355
T+ T I L + AY++ E +V +NT+ +L EG +K+
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQ 732
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 42/288 (14%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A + DQM + G P +++N L+ C R D V IL + I K + PD ++Y L
Sbjct: 627 ARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI--KAGVDPDNVTYNTL 684
Query: 175 LKS--------------H----------------------CDSGSSDKALELLNEMENKG 198
+ H C G +AL L++ M G
Sbjct: 685 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG 744
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE 258
VE TVTY ++ L K+G +EA L SEM+ + +V+ V I +R +
Sbjct: 745 VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT--LRDEVSYTTVIIGLCKAEQLDRASK 802
Query: 259 LIDEMRDA-GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L EM GL + ++N L+ + K + +DEA + + + GCSP+ T+ I L
Sbjct: 803 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCL 862
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
C DKA+++F E + + + +L+ GL + + KEA V+
Sbjct: 863 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 910
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLIESHKNDPKITQEPYL 100
D A+ I ++ K P + Y + + L+++ R D E + E +N ++
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTY--NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 717
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIP 159
+I + G A+ D M G + +++N + C RL D+ L E+
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL-DEASSLLSEM- 775
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGN 218
+ D++SY ++ C + D+A +L EM KG+ +T+ T+ +++ K
Sbjct: 776 ---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKR 832
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
+EA L M ++G V YN+ IT D ++ EL DEM G+ ++SY
Sbjct: 833 LDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 892
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGC 303
L+ C EA +V E + + C
Sbjct: 893 LIYGLCGQGRGKEALQVLEEMASSDC 918
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A +MD L R +S+ ++ ++ D+ L E+ L +
Sbjct: 763 GRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHT 819
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ LL+ + + D+AL LL M +G + +TY V+ CL K ++A L+ EM
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879
Query: 231 KKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISY 275
+G+ +Y V I G G + ++++EM + + D + +
Sbjct: 880 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKW 925
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 50/117 (42%)
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
DP+ D G K T + N + +N D ++E + + G +P++ T+
Sbjct: 105 DPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYH 164
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
I LC DKA+ + ++ + P+ + +L K ++K+A + R I
Sbjct: 165 LVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI 221
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 180/356 (50%), Gaps = 5/356 (1%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
S+S L+SE +P A ++ S ++H S+ + +RRL++++ + + +
Sbjct: 7 SLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHI-LRRLSEARMVTHVGRI 65
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISFNALLFACT 143
+E ++ E ++I++YG+ M D A+ F +M E+ G + S+N LL A
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFV 125
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
++ + KV LF ++P+ +Y +L+K C +KA LN M +G +
Sbjct: 126 EAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDV 184
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDE 262
+Y+TV+N L K G ++A L+ EM ++ V DV YN+ I D + +L D+
Sbjct: 185 FSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDK 244
Query: 263 -MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+ D+ + P+ ++N +++ K +D+ K+++ +++N + T+ + I+ LC G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEG 304
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
N DKA VF E V D T ++ G + KIKE+ + R ++++ N++
Sbjct: 305 NVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIV 360
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G ++ + M++ + +++S+N L+ + D+ +++ +P K
Sbjct: 331 MLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAK- 388
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D +YG+ + C +G +KAL ++ E+E+KG + Y ++++CL K+ EEA
Sbjct: 389 GYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEA 448
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKE---LIDEMRDAGLKPDTISYNF 277
L EM K GV+L+ N I GG RL + L+ M G P +SYN
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALI----GGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNI 504
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ C+ EA + + ENG P+ T+ + LC + A +++ + +
Sbjct: 505 LICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSG 564
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD +L+ GL K+ +A V+ ++ +
Sbjct: 565 LEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 134/271 (49%), Gaps = 6/271 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A+ FD+M E V +N L+ + + + L+D++ +
Sbjct: 190 VINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDS 249
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ ++ +++ G D L++ + M+ E TY+++++ L +GN ++A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKA 309
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL--IDEMRDAGLKPDTISYNFLM 279
E +++E+ ++ +DV YN + G + EL I E R++ + +SYN L+
Sbjct: 310 ESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNS---VNIVSYNILI 366
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+N +DEA ++ + G + + TT+ +I+ LC +G +KA V +E
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGH 426
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D +++ L KK++++EA +++ + K
Sbjct: 427 LDVYAYASIIDCLCKKRRLEEASNLVKEMSK 457
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 4/247 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A ++ +SKH ++S L + L + R SD L+ + +
Sbjct: 446 EEASNLVKEMSKH-GVELNSHVCNAL-IGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYN 503
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI +AG F A +M E G + +++ LL R R + L+ + +
Sbjct: 504 ILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQS 563
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD + + +L+ C G D A+ ++ ME++ VTY T++ +K ++
Sbjct: 564 -GLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNR 622
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +W M K G+ D+ +YN + E D+ R+ G+ P ++N L+
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVR 682
Query: 281 CYCKNEM 287
+M
Sbjct: 683 AVVNRKM 689
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 105/254 (41%), Gaps = 4/254 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFD 121
YA + L K +R + L++ + + ++CN LI + A
Sbjct: 430 YAYASIIDCLCKKRRLEEASNLVKE-MSKHGVELNSHVCNALIGGLIRDSRLSDASLLMR 488
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M + G +V+S+N L+ + + + E+ + L PD +Y +LL C
Sbjct: 489 GMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLEN-GLKPDLKTYSILLGGLCRD 547
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+ ALEL ++ G+E + + +++ L G ++A + + ME + ++ Y
Sbjct: 548 RKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 242 NVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N + + D R + M GL+PD ISYN ++ C + A + ++
Sbjct: 608 NTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARN 667
Query: 301 NGCSPNATTFRTWI 314
+G P T+ +
Sbjct: 668 HGIFPTVYTWNILV 681
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 174/355 (49%), Gaps = 5/355 (1%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
+S + S + + + D AL I+ K + + + + +L+K++ F +ETLI
Sbjct: 99 LSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLI 158
Query: 86 -ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
+ HK+ K + ++ +IR+YG AG A+RTF ++ G SV SFN LL +
Sbjct: 159 SQLHKSQIKCGENLFI-TVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQ 217
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
++ +D V ++F KK+ + P+ + +L+K+ C D A+ +L EM G V
Sbjct: 218 NKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVV 277
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDE 262
TYTT+L +G+ A R++ E+ +G D Y + + + Y G +++DE
Sbjct: 278 TYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI-LMDGYCKKGRFMDAVKVMDE 336
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M + ++P+ ++Y ++ YCK + E + + + E P++ I LC G
Sbjct: 337 MEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGK 396
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+ A +++K+ + + PD L+ L K+ K+ EA+ + +K P+ L
Sbjct: 397 VEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL 451
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 41/299 (13%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L ++KRF + + ++ + I + CN L+++ + D A+R ++M +G
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 131 SVISFNALLFA------------------------------------CTRSRLYDKVPIL 154
+V+++ +L C + R D V ++
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVM 334
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
DE+ ++ + P+ ++YG++++++C S + L LL++M K ++ V++ L
Sbjct: 335 -DEM-EENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLC 392
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTI 273
++G E A LW ++ KK D A + I G ++L DE + G P T+
Sbjct: 393 EEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF-EKGSIPSTL 451
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ C+ + EA ++++ + E GC PNA T+ I C GN + +V +E
Sbjct: 452 TYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEE 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 4/178 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DE 125
+ + K K+ ++ L++ I C +I + G + A + ++ +
Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
TP + I+ + + C ++++ LFDE K P ++Y L+ C+ G
Sbjct: 411 NCTPDNAITSTLIHWLCKEGKVWEARK-LFDEFEK--GSIPSTLTYNALIAGMCEGGELP 467
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+A L + M KG TY ++ K GNA E R+ EM G + A Y +
Sbjct: 468 EAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 169/329 (51%), Gaps = 8/329 (2%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF-SDIETLIESHKNDPKIT 95
+E +P AL ++ S S++ + S + +RRLA R S + +++ K
Sbjct: 22 AEKNPLSALSLFESASRNKSH---SAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPC 78
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPIL 154
+E +I++Y + M + A+ TF M D G V S+N LL A +D+
Sbjct: 79 KEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAES- 137
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F + ++SP+ +Y +L+K C +KA+ LL+ M ++ ++ +Y T++N +
Sbjct: 138 FSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMV 197
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM-RDAGLKPDT 272
K G+ A +++ EM +GV DV YN+ I + GD ++ KE+ + + +D + P+
Sbjct: 198 KVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNV 257
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN ++ CK DE+ +++E + +N + T+ + I+ LC +GN D A +V+KE
Sbjct: 258 VTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKE 317
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
V + D T ++ G + KIKE+
Sbjct: 318 IVESSLVVDAVTHNAMLNGFCRAGKIKES 346
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A++ FD+M G V +N L+ + YDK +++ + K
Sbjct: 192 LINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDC 251
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ ++Y +++ C G D++LE+ M E TY+++++ L + GN + A
Sbjct: 252 SVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGA 311
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R++ E+ + + +D +N + G + EL M + +SYN L+
Sbjct: 312 VRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKG 370
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+N ++EA ++E L + GC P +TT+ I+ LC +G +KA K+FKE+ D
Sbjct: 371 LFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLD 430
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK---KFPPNV 376
+V+GL K+ ++ EA ++ + K K P+V
Sbjct: 431 AYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHV 468
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 154/340 (45%), Gaps = 7/340 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D DK +I+ + K S + ++ + L K RF + + E + +
Sbjct: 236 DYDKGKEIWERLVKD-CSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFT 294
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
+LI +AG D A+R + ++ E ++ NA+L C ++ + + +
Sbjct: 295 YSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWM--V 352
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K N +SY +L+K ++G ++A+ + + KG + TY +++ L K G
Sbjct: 353 MGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGR 411
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
+A +++ E E LD AY+ + G + ++++M G K D N
Sbjct: 412 LNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNP 471
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + + +++A + +E GCSP ++ T I LC + F +AY KE +
Sbjct: 472 LINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKE 531
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
PD T LL++GL ++KKI+ A + + + K F P++
Sbjct: 532 WKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDI 571
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 13/282 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI---P 159
LI+ + G + A+ ++ + + G ++ L+ ++ +K +F E P
Sbjct: 367 LIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGP 426
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K D +Y ++ C G D+A+ ++N+M+ +G ++ ++N +
Sbjct: 427 GKL----DAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKL 482
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
E+A + EME KG + +YN I ER E + EM + KPD I+ +
Sbjct: 483 EDAINFFREMECKGCSPTIVSYNTLIKGL--CKAERFSEAYSFVKEMLEKEWKPDMITCS 540
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM C+ + ++ A +++ + G P+ T + ++ LC + A +++
Sbjct: 541 LLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRS 600
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
+P+ T L+EGL K + ++A + I K P+++
Sbjct: 601 TCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDII 642
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTF 120
YA V L K R + +++ + K K+ +P++CN LI + +A + A+ F
Sbjct: 432 YAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKL--DPHVCNPLINGFVRASKLEDAINFF 489
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+M+ G +++S+N L+ ++ + + E+ +K PD I+ LL+ C
Sbjct: 490 REMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK-EWKPDMITCSLLMDGLCQ 548
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+ AL L + +KG + Y +++ L E+A +L+S M++ ++
Sbjct: 549 EKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVT 608
Query: 241 YNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
N + Y D E+ E+ D + GL PD ISYN + C + +A +
Sbjct: 609 RNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDAL 668
Query: 300 ENGCSPNATTF 310
G P A T+
Sbjct: 669 NRGILPTAVTW 679
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
+ P+ +YN L+ CK + +++A + + + P+ ++ T I + G+ A
Sbjct: 147 VSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGAL 206
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP--PNVL 377
KVF E + + D +L++G K + K + + K PNV+
Sbjct: 207 KVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVV 258
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 177/388 (45%), Gaps = 37/388 (9%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKND 91
L+S+FD L + H P + + L++ L + K + +TL + +D
Sbjct: 65 LKSQFDQTLTLKFLTWARNH---PFFDSHCKCLSLHILTRFKLYKTAQTLAQELALSASD 121
Query: 92 PK-------ITQEPYLCN--------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
P + ++ N +++SY M D A+ T + G V+S+N
Sbjct: 122 PSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYN 181
Query: 137 ALLFACTRSRLYDKVPILFDEIPK---KYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++L A RSR V + +E+ + + +SP+ +Y +L++ C G K L E
Sbjct: 182 SVLDAIVRSR--GSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGE 239
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGD 252
ME G VTY T+++ K G +EA L M KG+ ++ +YNV I G
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ E+++EM G PD ++YN L+ YCK +A ++ + NG SP+ T+
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
I +C + N ++A + F + + P+ T L++G ++ + EA ++ + +
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419
Query: 372 FPPNVLR---------AWKKVEEELGLV 390
F P+V+ +++EE LG+V
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVV 447
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y + G D A M G ++IS+N ++ R + + +E+ K
Sbjct: 255 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK- 313
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD+++Y LL +C G+ +AL + EM GV + VTYT ++N + K N A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M +G+ + Y I + G +++EM ++G P ++YN +
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C E M+EA V + + E G +P+ ++ T I C G D+A+++ +E V PD
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T L++GL + +++ EA
Sbjct: 494 AVTYSSLIQGLCEMRRLTEA 513
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 140/268 (52%), Gaps = 10/268 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G F A+ +M G SV+++ AL+ + ++R ++ FD++ +
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR- 383
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CLYKQGNAE 220
L P++ +Y L+ G ++A +LNEM G + VTY ++ C+ ++ E
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER--ME 441
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA + EM +KG+ DV +Y+ I+ G+ +R ++ EM + G+ PD ++Y+ L+
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK- 338
C+ + EA + + + + G P+ T+ T I C G+ +KA + E M+HK
Sbjct: 502 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE--MIHKG 559
Query: 339 -IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+PD T +L+ GL K+ + +EAK ++
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLL 587
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 164/405 (40%), Gaps = 74/405 (18%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLT----VRRLAKSKRFSDIETLIESHKNDPKITQEP 98
+AL I++ + ++ SP Y + R L ++ F D + N+ T
Sbjct: 337 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT--- 393
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
LI + + G+ + A R ++M E G SV+++NA + C R+ + + ++ +
Sbjct: 394 ---TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 450
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K L+PD +SY ++ C G D+A ++ EM KGV VTY++++ L +
Sbjct: 451 VEK--GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 508
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISY 275
EA L EM G+ D Y I N Y GD + L DEM G PD ++Y
Sbjct: 509 RLTEACDLSQEMLDMGLPPDEFTYTTLI-NAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 567
Query: 276 NFLMT------------------------------------C--------------YCKN 285
+ L+ C +C
Sbjct: 568 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 627
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+M EA +V+E + E P + I+ C GN KA+ ++KE + +P TV
Sbjct: 628 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTV 687
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLV 390
L++ L K+ +E VI + LR+ + E EL V
Sbjct: 688 ITLIKALFKEGMNEEMSEVI--------GDTLRSCRLNEAELAKV 724
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 129/285 (45%), Gaps = 19/285 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A + +M E G +++++L+ R + L E+
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM-LDM 523
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD+ +Y L+ ++C G +KAL L +EM +KG VTY+ ++N L KQ EA
Sbjct: 524 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Query: 223 ERL-WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI----------------DEMRD 265
+RL + + ++ V DV Y+ I N + + + LI + M +
Sbjct: 584 KRLLFKLIYEESVPSDVT-YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 642
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
KP YN ++ +C+ + +A +Y+ + +G P+ T T I L G ++
Sbjct: 643 RNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 702
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+V +++ ++ + K+LVE K+ ++ V+ + K
Sbjct: 703 MSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAK 747
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR+ G A+ FD M G SV++++ LL A + Y + +L DE+ K
Sbjct: 166 LIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSK- 224
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y +L+ + C G +AL++LN + + G + VTYT VL L EEA
Sbjct: 225 GCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEA 284
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L ++M D +N IT+ G R +++ +M + G PD I+Y+ +M
Sbjct: 285 DKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDG 344
Query: 282 YCKNEMMDEAKKVYEGL----EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
CK +DEA K+ + L C P+ TF T I LC G FD+A KV E
Sbjct: 345 LCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHG 404
Query: 338 KIPDFNTVKLLVEG-LVKKKKIKEA 361
IPD T +V+G L K K +EA
Sbjct: 405 CIPDITTYNCIVDGFLCKSCKTEEA 429
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 85 IESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
I DP + CN LI+ G A R ++ LG ++I++N ++
Sbjct: 87 ISGSGKDPAVIP----CNILIKKLCADGRVADAERV---VEALGPSATIITYNTMVNGYC 139
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R+ D + D +P +PD +Y L+++ C G AL + ++M ++G +
Sbjct: 140 RAGNIDAARRMIDSVP----FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSV 195
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDE 262
VTY+ +L+ K+ ++A L EM KG + D+ YNV I GD ++++
Sbjct: 196 VTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNS 255
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
+ G KPD ++Y ++ C +E +EA K+ + N C+P+ TF I LC G
Sbjct: 256 LPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGF 315
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+A KV + PD T +++GL K++++ EA +++ +
Sbjct: 316 VGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKEL 361
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 10/264 (3%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKKY 162
+R Q G D A+R + G +VI N L+ C R+ D + + +
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADA-----ERVVEAL 122
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
S I+Y ++ +C +G+ D A +++ + T TY ++ L +G +A
Sbjct: 123 GPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDA 179
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ +M +G V Y++ + T ++ L+DEMR G +PD ++YN L+
Sbjct: 180 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINA 239
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + EA KV L GC P+A T+ + LC S +++A K+ + PD
Sbjct: 240 MCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPD 299
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI 365
T ++ L +K + A V+
Sbjct: 300 EVTFNAVITSLCQKGFVGRATKVL 323
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 135/332 (40%), Gaps = 44/332 (13%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
S+ D +AL + +S+ + P + Y ++ L S+R+ + + L+ ++
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTP--VLKSLCSSERWEEADKLLTKMFSNDCAPD 299
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
E +I S Q G A + QM E G CT
Sbjct: 300 EVTFNAVITSLCQKGFVGRATKVLAQMSEHG--------------CT------------- 332
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL----ELLNEMENKGVEVTTVTYTTVLNC 212
PD I+Y ++ C D+A+ ELL EM +K VT+ T++
Sbjct: 333 ---------PDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITS 383
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKP 270
L ++G + A ++ EM + G D+ YN + E +L++ M GL P
Sbjct: 384 LCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCP 443
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
DT +Y L + + M+ A ++ ++ G SP+ + + LC D A F
Sbjct: 444 DTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFF 503
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
V +PD +T +LVEG+ + ++EAK
Sbjct: 504 AYMVSNGCMPDESTYIILVEGIAYEGFLEEAK 535
>gi|212276298|ref|NP_001130394.1| uncharacterized protein LOC100191490 [Zea mays]
gi|194689016|gb|ACF78592.1| unknown [Zea mays]
gi|238014318|gb|ACR38194.1| unknown [Zea mays]
gi|414881856|tpg|DAA58987.1| TPA: hypothetical protein ZEAMMB73_205276 [Zea mays]
Length = 371
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 20/327 (6%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R+LA++ R DI+ + P P + + G+ D A M T
Sbjct: 33 LRQLARAGRLDDIDATLA-----PLFPSHPVAA--LSALSTLGLPDRASALLGTMTSPNT 85
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
LL + L + +P+ D ++ +L KS C + +D AL
Sbjct: 86 AHLNAVLGPLLRRRRLAGLVPSILAAHASVPR------DAVTDSILAKSLCLTSGADSAL 139
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRIT- 246
LL + + G + +TT+++ YKQ AE +W M + G+ D AAYN +T
Sbjct: 140 HLLRK-PSSGAPPSLQLFTTIIDSFYKQRLPHRAEEMWRAMVQDHGIAPDTAAYNALLTY 198
Query: 247 NTYGGDPERLKELIDEMRD-AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN---G 302
+ G + +KE+I MR+ A L+PD SYN LM +++ +DEA +VY LE
Sbjct: 199 KSTNGTVDEVKEVIRVMREEASLRPDVGSYNALMRAMARHKRLDEAVEVYRSLEAGKKAD 258
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ T+ + LCG+G + +A VF V K+ D TV++LV GL K + A+
Sbjct: 259 VVPDCATYSCVVGALCGAGRWSEAEDVFYAGVKRRKVADLGTVRVLVRGLKDAGKGRAAR 318
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEELGL 389
V+ + KKFP W+++E GL
Sbjct: 319 RVVVGLCKKFPEMFDGPWRELEVAAGL 345
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 156/311 (50%), Gaps = 5/311 (1%)
Query: 53 KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGM 112
+H +P + Y ++ VR L R + ++ + L+ ++ +AG
Sbjct: 3 RHGVAP--NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 113 FDHAMRTFDQMDELGTPR-SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
D A R M E G + ++++FN+++ ++ + +FDE+ ++ L+PD +SY
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE-GLAPDVVSY 119
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
LL +C G ++L + +EM +G+ VT+T++++ K GN E+A L ++M +
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+G+ ++ + I G + ++EMR G++P + YN L+ YCK MD
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A+++ +E P+ T+ T I C GN D A+++ ++ + +PD T L+
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299
Query: 351 GLVKKKKIKEA 361
GL ++K++ +A
Sbjct: 300 GLCEEKRLNDA 310
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 130/260 (50%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G ++ F +M + G V++F +L+ A ++ ++ L ++ ++
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM-RER 180
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L +++++ L+ C G D AL + EM G++ + V Y ++N K G + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EME K V DV Y+ I+ G+ + +L +M G+ PD I+Y+ L+
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ + +++A +++E + + G P+ T+ T I C GN +KA + E + +PD
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L+ GL K + KEA
Sbjct: 361 VVTYSVLINGLSKSARTKEA 380
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 114/222 (51%), Gaps = 7/222 (3%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ ++P+ +Y +L+++ C G ++A+ ++ +M G VTY T++ + G +
Sbjct: 3 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 62
Query: 221 EAERLWSEMEKKG-VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
AER+ S M ++G ++ +N + G E +++ DEM GL PD +SYN L
Sbjct: 63 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ YCK + E+ V+ + + G P+ TF + I+ C +GN ++A + + M +
Sbjct: 123 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ--MRER 180
Query: 339 IPDFNTVKL--LVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
N V L++G KK + +A + ++K P+V+
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 222
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 119/287 (41%), Gaps = 52/287 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I Y + G D A + +M + G I++++L+ C RL D LF+ + +
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE-LFENMLQ- 319
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD+ +Y L+ HC G+ +KAL L +EM KGV VTY+ ++N L K +E
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A RL ++ Y DP PD I Y+ LM C
Sbjct: 380 AHRLLFKL-------------------YHEDP---------------VPDNIKYDALMLC 405
Query: 282 ---------------YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+C +M EA KVY+ + + + + + I+ C GN KA
Sbjct: 406 CSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKA 465
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
K+ + P+ + LV GL ++ + EA I+ + P
Sbjct: 466 LSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 512
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 127/335 (37%), Gaps = 89/335 (26%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRL-------------- 147
LI + + G D A+ ++M + G SV+ +NAL+ C R+
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251
Query: 148 --------------YDKVPIL-----FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
Y KV L ++ K + PD I+Y L++ C+ + A
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
EL M GV+ TYTT+++ K+GN E+A L EM +KGV DV Y+V I
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371
Query: 249 YGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTC---------------YCKNEMMDE 290
R KE L+ ++ PD I Y+ LM C +C +M E
Sbjct: 372 --SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKE 429
Query: 291 AKKVYEGLEE-----------------------------------NGCSPNATTFRTWIY 315
A KVY+ + + +G SPN+T+ + +
Sbjct: 430 ADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVR 489
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
L G +A ++ + + D K L++
Sbjct: 490 GLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 524
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGD 252
M GV TY ++ L +G EEA + +M G + YN + G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 253 PERLKELIDEMRDAG-LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ + ++ MR+ G KP+ +++N ++ CK M+ A+KV++ + G +P+ ++
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T + C G ++ VF E +PD T L+ K +++A ++ ++++
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 174/355 (49%), Gaps = 5/355 (1%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
+S + S + + + D AL I+ K + + + + +L+K++ F +ETLI
Sbjct: 99 LSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETLI 158
Query: 86 -ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
+ HK+ K + ++ +IR+YG AG A+RTF ++ G SV SFN LL +
Sbjct: 159 SQLHKSQIKCGENLFI-TVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQ 217
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
++ +D V ++F KK+ + P+ + +L+K+ C D A+ +L EM G V
Sbjct: 218 NKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVV 277
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDE 262
TYTT+L +G+ A R++ E+ +G D Y + + + Y G +++DE
Sbjct: 278 TYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI-LMDGYCKKGRFMDAVKVMDE 336
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M + ++P+ ++Y ++ YCK + E + + + E P++ I LC G
Sbjct: 337 MEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGK 396
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+ A +++K+ + + PD L+ L K+ K+ EA+ + +K P+ L
Sbjct: 397 VEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTL 451
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 137/304 (45%), Gaps = 51/304 (16%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L ++KRF + + ++ + I + CN L+++ + D A+R ++M +G
Sbjct: 215 LVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIP 274
Query: 131 SVISFNALLFA------------------------------------CTRSRLYDKVPIL 154
+V+++ +L C + R D V ++
Sbjct: 275 NVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVM 334
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
DE+ ++ + P+ ++YG++++++C S + L LL++M K ++ V++ L
Sbjct: 335 -DEM-EENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLC 392
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY------GGDPERLKELIDEMRDAGL 268
++G E A LW ++ KK D A IT+T G ++L DE + G
Sbjct: 393 EEGKVEVACELWKKLLKKNCTPDNA-----ITSTLIHWLCKEGKVWEARKLFDEF-EKGS 446
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P T++YN L+ C+ + EA ++++ + E GC PNA T+ I C GN + +
Sbjct: 447 IPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIR 506
Query: 329 VFKE 332
V +E
Sbjct: 507 VMEE 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 4/178 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ + K K+ ++ L++ I C +I + G + A + ++ +
Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410
Query: 127 G-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
TP + I+ + + C ++++ LFDE K P ++Y L+ C+ G
Sbjct: 411 NCTPDNAITSTLIHWLCKEGKVWEARK-LFDEFEK--GSIPSTLTYNALIAGMCEGGELP 467
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+A L + M KG TY ++ K GNA E R+ EM G + A Y +
Sbjct: 468 EAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
>gi|414881857|tpg|DAA58988.1| TPA: hypothetical protein ZEAMMB73_205276 [Zea mays]
Length = 379
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 20/327 (6%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R+LA++ R DI+ + P P + + G+ D A M T
Sbjct: 33 LRQLARAGRLDDIDATLA-----PLFPSHPVAA--LSALSTLGLPDRASALLGTMTSPNT 85
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
LL + L + +P+ D ++ +L KS C + +D AL
Sbjct: 86 AHLNAVLGPLLRRRRLAGLVPSILAAHASVPR------DAVTDSILAKSLCLTSGADSAL 139
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRIT- 246
LL + + G + +TT+++ YKQ AE +W M + G+ D AAYN +T
Sbjct: 140 HLLRK-PSSGAPPSLQLFTTIIDSFYKQRLPHRAEEMWRAMVQDHGIAPDTAAYNALLTY 198
Query: 247 NTYGGDPERLKELIDEMRD-AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN---G 302
+ G + +KE+I MR+ A L+PD SYN LM +++ +DEA +VY LE
Sbjct: 199 KSTNGTVDEVKEVIRVMREEASLRPDVGSYNALMRAMARHKRLDEAVEVYRSLEAGKKAD 258
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ T+ + LCG+G + +A VF V K+ D TV++LV GL K + A+
Sbjct: 259 VVPDCATYSCVVGALCGAGRWSEAEDVFYAGVKRRKVADLGTVRVLVRGLKDAGKGRAAR 318
Query: 363 GVIRTIKKKFPPNVLRAWKKVEEELGL 389
V+ + KKFP W+++E GL
Sbjct: 319 RVVVGLCKKFPEMFDGPWRELEVAAGL 345
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 171/340 (50%), Gaps = 5/340 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND--PKITQEPY 99
D AL I+ K + + + +L++++ F +E+L+ +N P E
Sbjct: 63 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENL 122
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+L+R+YG AG ++ +MR F ++ + G RSV S N LL +++ +D V +F
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + ++P+ + LL+K+ C + A ++L+E+ + G+ VTYTT+L +G+
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
E A+R+ EM +G D Y V + + Y G ++D+M ++P+ ++Y
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTV-LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGV 301
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK + EA+ +++ + E P+++ I LC D+A ++++ + +
Sbjct: 302 MIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNN 361
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+PD + L+ L K+ ++ EA+ + +K P++L
Sbjct: 362 CMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLL 401
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 144/332 (43%), Gaps = 41/332 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPR 130
L +++RF + + ++ K IT + CNL +++ + + A + D++ +G
Sbjct: 165 LIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVP 224
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+++++ +L R + +L + + + + PD +Y +L+ +C G +A
Sbjct: 225 NLVTYTTILGGYVARGDMESAKRVLEEMLDRGW--YPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-------------------- 229
++++ME +E VTY ++ L K+ + EA ++ EM
Sbjct: 283 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC 342
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPERLKELI----------------DEMRDAGLKPDTI 273
E VD + + N D L LI DE + G P +
Sbjct: 343 EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLL 401
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN L+ C+ + EA ++++ + E C PNA T+ I L +GN + +V +E
Sbjct: 402 TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 461
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ + P+ T +L EGL K K ++A ++
Sbjct: 462 LEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 3/238 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G F A D M++ + +++ ++ A + + + +FDE+ ++
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER- 325
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++ + C+ D+A L +M +T+++ L K+G EA
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ E EK + + YN I G+ L D+M + KP+ +YN L+
Sbjct: 386 RKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
KN + E +V E + E GC PN TTF L G + A K+ +VM K+
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV 502
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 29/387 (7%)
Query: 2 TSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS 61
T L + R A SS+ + + A ++R DPD AL ++ + P
Sbjct: 47 TRLLLLHRFPAAERLLASSSPLTPALLQAALRRVR--LDPDAALHLFRLAP---SRPSLV 101
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIES--HKNDPKITQEPYLCN--------------LIR 105
+AQ L + LA+++RF D L+ S +P P+L L+R
Sbjct: 102 SHAQLLHI--LARARRFHDARALLSSLPPHAEPLF---PHLAEVYRDFTFSAVSFDLLLR 156
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
++ AG A+ FD M ++G S+ S N LL +S +++ ++ + +
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM-RIAGVL 215
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD+ + ++ K++C G +A+E + EME G+EV V Y V++C G E+A R+
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG-LKPDTISYNFLMTCYC 283
+++KG+ +V Y + + G E + ++ EM++ G + D ++Y ++ YC
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ MD+A +V + + G N + T I LC G ++ KV +E V PD
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ L++G ++ +++A + R + +
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVR 422
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 163/356 (45%), Gaps = 10/356 (2%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE 86
S ++ +KL DP A +Y + A + + + + + R + +E
Sbjct: 185 SCNRLLNKLVQSGDPGMAAMVYGQM--RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVE 242
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
+ ++ Y G + A R + + G +V+++ L+ +
Sbjct: 243 EMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDG 302
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
++ + E+ + ++ D+++YG+++ +C G D A + NEM + G+ V Y
Sbjct: 303 RMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVY 362
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
T++N L K G EE +++ EME G+ D +YN I G + E+ M
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVR 422
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
GL T++YN L+ +C +D+A +++ + + G +PN + T + L +G ++
Sbjct: 423 NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQ 482
Query: 326 AYKVFKESV---MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
A ++KE++ + + FNTV + GL K ++ EA+ ++ +K+ + PP+ L
Sbjct: 483 ALNLWKETLARGLAKNVITFNTV---INGLCKIGRMAEAEELLDRMKELRCPPDSL 535
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 8/310 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFD 121
+ + + L K R +++ +++ + D + + Y N LI Y + G A
Sbjct: 360 FVYNTMINGLCKLGRMEEVQKVLQEME-DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR 418
Query: 122 QMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
M G + +++N LL C+ + D + + F + K ++P++IS LL
Sbjct: 419 MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF--LMLKRGVAPNEISCSTLLDGLFK 476
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G +++AL L E +G+ +T+ TV+N L K G EAE L M++ D
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536
Query: 241 YNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
Y + + Y G L+++M G P +N +T + + + ++ +
Sbjct: 537 YRT-LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G SPN T+ I C GN +A ++ E V P+ L+ K+ K+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655
Query: 359 KEAKGVIRTI 368
EA V++ +
Sbjct: 656 DEANLVLQKL 665
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
S + DK + +++ +P S+ ++ + L KS R +D ++L ES +N +
Sbjct: 677 STIEIDKISHVVDTIAD--GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
+LI +G D A D M G ++I++N+L++ +S + LF+
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSS----------------DKALELLNEMENKGVE 200
++ K +SP+ I+Y L+ +C G + ++A++LL++M V+
Sbjct: 795 KLQSK-GISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVD 853
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+TY T+++ K GN EE +L+ EM +G+
Sbjct: 854 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGL 887
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 145/395 (36%), Gaps = 81/395 (20%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+ L K R ++ E L++ K L Y + G A ++M+ LG
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL---------LKSH 178
SV FN+ + ++ + KV + E+ + LSP+ ++YG L L
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR-GLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 179 CD--------------------------SGSSDKALELLNEMEN----KGVEVTT----- 203
C+ G D+A +L ++ N G ++T
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDK 683
Query: 204 -----------------VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
V + ++ L K G +A+ L+ + K D Y+ I
Sbjct: 684 ISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIH 743
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + L D M AGL P+ I+YN L+ CK+ + A ++ L+ G SP
Sbjct: 744 GCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP 803
Query: 306 NATTFRTWIYHLCGSGNFDKAYKV----FKESVMVHKI------------PDFNTVKLLV 349
N T+ T I C G +A+K+ +E M I P++ T L+
Sbjct: 804 NGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLI 863
Query: 350 EGLVKKKKIKEAKGVI--RTIKKKFPPNVLRAWKK 382
G +K ++E + I+ P N + WK+
Sbjct: 864 HGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKR 898
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 159/331 (48%), Gaps = 1/331 (0%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
+ +R + + D AL I+ K++ + + + RL++++ F +E+L+ ++
Sbjct: 57 AMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSG 116
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
E +IRSYG A A++TF ++ G RSV S N LL A ++ + V
Sbjct: 117 INCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVH 176
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+LF K+ + P+ + +L+K+ C + A ++ +EM + G+ VTYTT+L
Sbjct: 177 LLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGG 236
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
+G+ A+R++ E+ G D Y + + G +++DEM + G++P+
Sbjct: 237 YVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPN 296
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
I+Y ++ YCK EA + + E PN+ I LCG G +A K+++
Sbjct: 297 DITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWE 356
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+ + + PD L+ L K+ I EA+
Sbjct: 357 KLLKKNCTPDNAITSTLIHWLCKEGNIWEAR 387
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 162/384 (42%), Gaps = 69/384 (17%)
Query: 46 DIYSSVSKHYASPVSSRYA-------QDLTVRR-----------LAKSKRFSDIETLIES 87
D++ +V + Y + A Q VRR L ++ RFS + L +
Sbjct: 122 DLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKY 181
Query: 88 HKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA----- 141
K+ + + CN LI++ + + A + FD+M +G +V+++ +L
Sbjct: 182 SKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRG 241
Query: 142 -------------------------------CTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
+ R D V ++ DE+ + + P+ I+
Sbjct: 242 DMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVM-DEMEEN-GVEPNDIT 299
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
YG+++ +C S +AL LLN+M K + V++ L +G +EA ++W ++
Sbjct: 300 YGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLL 359
Query: 231 KKGVDLDVAAYNVRITNTY------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
KK D A IT+T G+ ++L +E + G ++YN L+ C+
Sbjct: 360 KKNCTPDNA-----ITSTLIHWLCKEGNIWEARKLFNEF-ERGTISSLLTYNTLIAGMCE 413
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ EA ++++ + E GC PN T+ I G + KV +E + + + +T
Sbjct: 414 MGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNEST 473
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTI 368
+LVEGL+K K +E ++ I
Sbjct: 474 YLILVEGLLKLGKREELLNILSMI 497
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 17/150 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-------CTRSRLYDKVPILF 155
LI + G A + F++ E GT S++++N L+ C +RL+D
Sbjct: 373 LIHWLCKEGNIWEARKLFNEF-ERGTISSLLTYNTLIAGMCEMGELCEAARLWD------ 425
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D + K P++ +Y +L+K G + + ++++ EM +KG + TY ++ L K
Sbjct: 426 DMLEK--GCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLK 483
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
G EE + S + G +D A+N+ +
Sbjct: 484 LGKREELLNILSMIISSGA-VDFKAWNLFV 512
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 143/283 (50%), Gaps = 4/283 (1%)
Query: 91 DPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
D + E L N L+R + + G A + FD+M P +V++FN L+ R+R D
Sbjct: 179 DAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQP-TVVTFNTLISGMCRARDLD 237
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
V L+ E+ + PD +YG L+K C +G + A+++ NEM + GV V +TT+
Sbjct: 238 AVDGLYKEM-SDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTL 296
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGL 268
++ K+GN L+ +M +GV D+ AYN + + E +++EM++AGL
Sbjct: 297 IDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGL 356
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
KPD ++Y L+ CK+ +D A + + + E S + T+ I L +G A +
Sbjct: 357 KPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAER 416
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V +E + PD T ++++ +K +K +++ ++ K
Sbjct: 417 VLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 5/258 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + G + M + M G ++++NAL+ R+R + +E+ K
Sbjct: 296 LIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM-KNA 354
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PDK++Y L+ C G D A+++ +M K V + VTYT +++ L K G +A
Sbjct: 355 GLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDA 414
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
ER+ EM + ++ D Y + I GD + +L+ EM++ G KP ++YN +M
Sbjct: 415 ERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNG 474
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M A + + G SP+ T+ + C G + ++ MV PD
Sbjct: 475 LCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELESSKGMV---PD 531
Query: 342 FNTVKLLVEGLVKKKKIK 359
F L+ L KKK K
Sbjct: 532 FAVYTSLISELAKKKPAK 549
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 126/261 (48%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + + G ++A++ F++M + G + + F L+ A + + L+ ++ +
Sbjct: 261 LIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDM-RVR 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y L+ C + + A ++ EM+N G++ VTYTT+++ K G + A
Sbjct: 320 GVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMA 379
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M +K V LD Y I+ + G P + ++ EM +A L+PD +Y ++
Sbjct: 380 MDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDA 439
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+ + K+ + ++ G P T+ + LC G A + + + PD
Sbjct: 440 FCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPD 499
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T +L++G K K+ ++
Sbjct: 500 DITYNILLDGQCKHGKVANSE 520
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S+ +A ++ + G+ T + ++ + G A +++ EM ++ V V +N
Sbjct: 166 STPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFN 224
Query: 243 VRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I+ D + + L EM D G+KPD +Y L+ +C+ M+ A K++ + +
Sbjct: 225 TLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDT 284
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G +PNA F T I C GN + ++++ + +PD LV GL + + +K A
Sbjct: 285 GVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAA 344
Query: 362 KGVIRTIK 369
+ ++ +K
Sbjct: 345 ESIVEEMK 352
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 5/207 (2%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE 97
E + + +D+Y + P A + V L +++ E+++E KN +
Sbjct: 303 EGNVNAGMDLYQDMRVRGVMP--DLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDK 360
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFD 156
LI + G D AM +M E +++ AL+ +++ R D +L +
Sbjct: 361 VTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE 420
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ + L PD +Y +++ + C G +LL EM+NKG + VTY ++N L K
Sbjct: 421 MM--EAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKL 478
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNV 243
G + A+ L M GV D YN+
Sbjct: 479 GQMKNADMLLHAMLNIGVSPDDITYNI 505
>gi|115450015|ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|125584252|gb|EAZ25183.1| hypothetical protein OsJ_08983 [Oryza sativa Japonica Group]
gi|215769058|dbj|BAH01287.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 423
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 173/377 (45%), Gaps = 23/377 (6%)
Query: 32 KSKLRSE-FDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN 90
K+ +RS P+ D++ S H A ++ R L+V RLA + R D+ I S
Sbjct: 48 KNSIRSAAHTPEALADLFISGLSHPAF-LADRPIFTLSVHRLASAGR-RDLVASILSSSL 105
Query: 91 DPKITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
P +L LI Y AGM DH++ TF + TP S + +ALL A +RL
Sbjct: 106 TSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTF----RIVTPPSDRALSALLSAYHDNRL 161
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTY 206
YD+ F +P + + P +S+ +LLKS SG A L +EM +K VE V+
Sbjct: 162 YDRAIQAFRTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSC 221
Query: 207 TTVLNCLYKQGNAEEAERLWSEME-----KKGVDLDVAAYNVRITNTYG-GDPERLKELI 260
+L + ++ + K+ + +V+ YN+R+ + G EL+
Sbjct: 222 NEILKGYLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSKGRSFEAAELL 281
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE------NGCSPNATTFRTWI 314
D M G+ P+ S+N ++ CK + A +++ + E G PN+ T+ +
Sbjct: 282 DAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLL 341
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
L G F A +VFKE + P F V+ L++GL+K +K K AK V ++K
Sbjct: 342 EGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEVAMAMRKVVKG 401
Query: 375 NVLRAWKKVEEELGLVP 391
+ WKKVE E P
Sbjct: 402 DAKEEWKKVEAEFSFEP 418
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 29/387 (7%)
Query: 2 TSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS 61
T L + R A SS+ + + A ++R DPD AL ++ + P
Sbjct: 47 TRLLLLHRFPAAERLLASSSPLTPALLQAALRRVR--LDPDAALHLFRLAP---SRPSLV 101
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIES--HKNDPKITQEPYLCN--------------LIR 105
+AQ L + LA+++RF D L+ S +P P+L L+R
Sbjct: 102 SHAQLLHI--LARARRFHDARALLSSLPPHAEPLF---PHLAEVYRDFTFSAVSFDLLLR 156
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
++ AG A+ FD M ++G S+ S N LL +S +++ ++ + +
Sbjct: 157 AHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM-RIAGVL 215
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD+ + ++ K++C G +A+E + EME G+EV V Y V++C G E+A R+
Sbjct: 216 PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRI 275
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG-LKPDTISYNFLMTCYC 283
+++KG+ +V Y + + G E + ++ EM++ G + D ++Y ++ YC
Sbjct: 276 LESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYC 335
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ MD+A +V + + G N + T I LC G ++ KV +E V PD
Sbjct: 336 QRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKY 395
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ L++G ++ +++A + R + +
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVR 422
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 163/356 (45%), Gaps = 10/356 (2%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE 86
S ++ +KL DP A +Y + A + + + + + R + +E
Sbjct: 185 SCNRLLNKLVQSGDPGMAAMVYGQM--RIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVE 242
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
+ ++ Y G + A R + + G +V+++ L+ +
Sbjct: 243 EMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDG 302
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
++ + E+ + ++ D+++YG+++ +C G D A + NEM + G+ V Y
Sbjct: 303 RMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVY 362
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
T++N L K G EE +++ EME G+ D +YN I G + E+ M
Sbjct: 363 NTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVR 422
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
GL T++YN L+ +C +D+A +++ + + G +PN + T + L +G ++
Sbjct: 423 NGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQ 482
Query: 326 AYKVFKESV---MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
A ++KE++ + + FNTV + GL K ++ EA+ ++ +K+ + PP+ L
Sbjct: 483 ALNLWKETLARGLAKNVITFNTV---INGLCKIGRMAEAEELLDRMKELRCPPDSL 535
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 4/235 (1%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
S + DK + +++ +P S+ ++ + L KS R +D ++L ES +N +
Sbjct: 677 STIEIDKISHVVDTIAD--GNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
+LI +G D A D M G ++I++N+L++ +S + LF+
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
++ K +SP+ I+Y L+ +C G + +A +L +M +G++ T +TY+ ++ L Q
Sbjct: 795 KLQSK-GISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
G EEA +L +M + VD + Y I G+ E + +L DEM GL P
Sbjct: 854 GYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 138/309 (44%), Gaps = 10/309 (3%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+ L K R ++ E L++ K L Y + G A ++M+ LG
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
SV FN+ + ++ + KV + E+ + LSP+ ++YG L+ C G+ +A
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSAR-GLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L EM N G+ + +++C YK+G +EA + ++ V++D+ I+
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL----VNIDMIP-GCSIST 678
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ +++ ++D + D + +N ++ CK+ + +AK ++E L P+
Sbjct: 679 I---EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ + I+ SG+ D+A+ + + P+ T L+ GL K K+ A +
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795
Query: 368 IKKK-FPPN 375
++ K PN
Sbjct: 796 LQSKGISPN 804
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 18/244 (7%)
Query: 149 DKVPILFDEI----PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
DK+ + D I P N+ + I +GL C SG A L + NK
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGL-----CKSGRIADAKSLFESLRNKRFLPDNF 736
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELI 260
TY+++++ G+ +EA L M G+ ++ YN I YG G R L
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLI---YGLCKSGKLSRAVNLF 793
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
++++ G+ P+ I+YN L+ YCK EA K+ + + E G P T+ IY LC
Sbjct: 794 NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI--RTIKKKFPPNVLR 378
G ++A K+ + + + P++ T L+ G +K ++E + I+ P N +
Sbjct: 854 GYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIG 913
Query: 379 AWKK 382
WK+
Sbjct: 914 NWKR 917
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 8/310 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFD 121
+ + + L K R +++ +++ + D + + Y N LI Y + G A
Sbjct: 360 FVYNTMINGLCKLGRMEEVQKVLQEME-DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR 418
Query: 122 QMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
M G + +++N LL C+ + D + + F + K ++P++IS LL
Sbjct: 419 MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF--LMLKRGVAPNEISCSTLLDGLFK 476
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G +++AL L E +G+ +T+ TV+N L K G EAE L M++ D
Sbjct: 477 AGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLT 536
Query: 241 YNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
Y + + Y G L+++M G P +N +T + + + ++ +
Sbjct: 537 YRT-LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G SPN T+ I C GN +A ++ E V P+ L+ K+ K+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655
Query: 359 KEAKGVIRTI 368
EA V++ +
Sbjct: 656 DEANLVLQKL 665
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ YG+ G + M G + FN ++ A + + D+V +F ++ K+
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKM-KQQ 534
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP+ ++YG L+ + C G D A+ N+M N+GV V + +++ L E+
Sbjct: 535 GLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKV 594
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L+ EM +G+ D+ +N + N G + LID M GLKPD ISYN L+
Sbjct: 595 EELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C MDEA K+ +G+ G PN ++ T ++ C +G D AY +F+E + P
Sbjct: 655 HCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPG 714
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL + + EA+
Sbjct: 715 VETYNTILNGLFRSGRFSEAR 735
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 7/258 (2%)
Query: 122 QMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP-KKYNLSPDKISYGLLLKSHC 179
QM E+G V+S+N LL C R R + +L + + + SPD +SY +++
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+ G DKA L EM GV VTY T+++ L K + AE ++ +M +KGV +
Sbjct: 205 NEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261
Query: 240 AYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
YN I + E + +M D G+KP ++YN ++ CK + +D A+ V++ +
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+ G P+ T+ T I LC + DKA VF++ + PD T ++++GL K + +
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381
Query: 359 KEAKGVI-RTIKKKFPPN 375
A+GV + I K PN
Sbjct: 382 DRAEGVFQQMIDKGVKPN 399
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 131/267 (49%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +Y + M D M F +M + G +V+++ L+ A + D + F+++ +
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINE- 569
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P+ + + L+ C +K EL EM N+G+ V + TVL L K+G EA
Sbjct: 570 GVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEA 629
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL M G+ DV +YN I + + + +L+D M AGLKP+ +SYN L+
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +D A ++ + G +P T+ T + L SG F +A +++ + K+
Sbjct: 690 YCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWS 749
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T ++++G K EA + +++
Sbjct: 750 ICTYSIILDGFCKNNCFDEAFKIFQSL 776
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 137/276 (49%), Gaps = 6/276 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A F +M G V+++N ++ +++ D+ +F ++ +K
Sbjct: 199 VINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK- 254
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y ++ C + D A + +M +KGV+ + VTY T+++ L K + A
Sbjct: 255 GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRA 314
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E ++ +M +GV D YN I ++ + + +M D G+KPD ++Y ++
Sbjct: 315 EGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDG 374
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +D A+ V++ + + G PN T+ I+ +G +++ + KE PD
Sbjct: 375 LCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNV 376
T LL++ L K K EA+ + + I+K P+V
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 10/281 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + G + F + + G I N LL C R+ + + +L ++P+
Sbjct: 90 VIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPE- 148
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM---ENKGVEVTTVTYTTVLNCLYKQGN 218
+SY LLK CD +++A ELL+ M ++ V+Y V+N + +G
Sbjct: 149 VGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQ 208
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++A L+ EM GV DV YN I + +R +++ +M + G+KP+ ++YN
Sbjct: 209 VDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNT 265
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK + +D A+ V++ + + G P+ T+ T I LC + D+A VF++ +
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG 325
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
PD T +++GL K + I +A+GV + I K P+ L
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +A D A F +M + G S +++N ++ +++ D+ +F ++ +
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR- 324
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y ++ C + + DKA + +M +KGV+ +TYT +++ L K + + A
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E ++ +M KGV + YN I G E + + I EM L+PD +Y L+
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CKN +EA+ +++ + G P+ T + ++ G + + + V P+
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
++ K+ I E + +K++ PNV+
Sbjct: 505 HRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVV 541
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 37/304 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + + G D A+ F+QM G TP +V+ FN+L++ ++KV LF E+ +
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVV-FNSLVYGLCTVDKWEKVEELFLEMLNQ 604
Query: 162 ----------------------------------YNLSPDKISYGLLLKSHCDSGSSDKA 187
L PD ISY L+ HC + D+A
Sbjct: 605 GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEA 664
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++LL+ M + G++ V+Y T+L+ K G + A L+ EM +KGV V YN +
Sbjct: 665 VKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G +EL M + +Y+ ++ +CKN DEA K+++ L +
Sbjct: 725 LFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF I L G + A +F +P T +L+ E L+++ ++E +
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFS 844
Query: 367 TIKK 370
++K
Sbjct: 845 VMEK 848
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 20/276 (7%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +A D A F QM + G + ++N L+ + +++V E+ +
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM-SAH 429
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L PD +YGLLL C +G ++A L + M KG++ + Y +L+ K+G E
Sbjct: 430 DLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEM 489
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDE-------MRDAGLKPDTISY 275
L + M G+ + N RI NT + + +IDE M+ GL P+ ++Y
Sbjct: 490 HDLLNLMVANGI-----SPNHRIFNTVICAYAK-RAMIDEVMHIFIKMKQQGLSPNVVTY 543
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
L+ CK +D+A + + G +PN F + +Y LC ++K ++F E +
Sbjct: 544 GTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLN 603
Query: 336 VHKIPD---FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
PD FNTV + L K+ ++ EA+ +I ++
Sbjct: 604 QGIRPDIVFFNTV---LCNLCKEGRVMEARRLIDSM 636
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
LCNL + G A R D M +G VIS+N L+ C SR+ + V +L +
Sbjct: 617 LCNLCKE----GRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
L P+ +SY LL +C +G D A L EM KGV TY T+LN L++ G
Sbjct: 673 SA--GLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
EA L+ M K + Y++ + + + ++ + L+ D I++N
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K ++A ++ + NG P+ T+R +L G+ ++ +F
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ + + L+ L+ + +I A + + +K
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEK 884
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 35/229 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL-------- 154
L+ Y +AG D+A F +M G V ++N +L RS + + L
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745
Query: 155 --------------------FDEIPKKY------NLSPDKISYGLLLKSHCDSGSSDKAL 188
FDE K + +L D I++ +++ G + A+
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+L + G+ + VTY + L ++G+ EE + L+S MEK G + N I
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKL 865
Query: 249 YG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
G+ R + ++ + + + + L++ + + E AK + E
Sbjct: 866 LDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPE 914
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 138/260 (53%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++ +AG D A R M E G S+++FN ++ ++ + +FDE+ ++
Sbjct: 196 LVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE- 254
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD +SY L+ +C +G +AL + EM KGV VT+T++++ + + GN E A
Sbjct: 255 GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M ++G+ ++ + I G + + EMR+ ++P + YN L+
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK MDEA+++ +E G P+ T+ T + C G+ D A+++ ++ + +PD
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T L+ GL +++++ +A
Sbjct: 435 AITYSSLIRGLCEERRLGDA 454
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 4/297 (1%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V L K+ R D + + + L+ Y +AG A+ F +M + G
Sbjct: 231 VVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKG 290
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
V++F +L+ A R+ ++ L ++ ++ L ++ ++ L+ C +G D A
Sbjct: 291 VVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER-GLRMNEFTFTALIDGFCRNGFLDDA 349
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L + EM ++ + V Y ++N K G +EA L EME KG+ DV Y+ I +
Sbjct: 350 LLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST-ILS 408
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
Y GD + EL +M G+ PD I+Y+ L+ C+ + +A +++E + + G P
Sbjct: 409 GYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQP 468
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+ T+ T I C GN KA + E + +PD T +L++GL K + KEA+
Sbjct: 469 DEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 28/298 (9%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + +AG + A+ QM E G + +F AL+ R+ D + E+ ++
Sbjct: 300 SLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM-RE 358
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P + Y +L+ +C G D+A EL++EME KG++ VTY+T+L+ K G+ +
Sbjct: 359 CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDS 418
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFL 278
A L +M KKGV D Y+ I + RL EL ++M GL+PD +Y L
Sbjct: 419 AFELNRKMLKKGVVPDAITYSSLIRGLC--EERRLGDACELFEKMLQLGLQPDEFTYTTL 476
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF-------- 330
+ +CK + +A +++ + + G P+ T+ I L S +A ++
Sbjct: 477 IDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP 536
Query: 331 -----KESVMVH--KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
K ++H + +F +V L++G KG++ K + + R WK
Sbjct: 537 VPDNIKYEALMHCCRTAEFKSVVALLKGF-------SMKGLMNQADKVYQSMLDRHWK 587
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 17/282 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G D A +M+ G V++++ +L + D L ++ KK
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK- 429
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I+Y L++ C+ A EL +M G++ TYTT+++ K+GN ++A
Sbjct: 430 GVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKA 489
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM KKGV DV Y+V I + + + L+ ++ PD I Y LM C
Sbjct: 490 LSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC 549
Query: 282 ---------------YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ +M++A KVY+ + + + + + I+ C GN KA
Sbjct: 550 CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKA 609
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
K+ + P+ + LV GL ++ EA VI+ +
Sbjct: 610 LSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 113/246 (45%), Gaps = 37/246 (15%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G S++++NA+L A + + L +L + + ++P+ +Y +L+++ C G ++
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRLLASML--RDGVAPNVYTYNILVRALCARGQREE 172
Query: 187 ALELL-NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
AL ++ ++M G VTY T++ + G + AERL
Sbjct: 173 ALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERL-------------------- 212
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ MR+ G++P +++N ++ CK M++A+K+++ + G +P
Sbjct: 213 --------------VGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTP 258
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ ++ T + C +G +A VF E +PD T L+ + + ++ A ++
Sbjct: 259 DGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALV 318
Query: 366 RTIKKK 371
++++
Sbjct: 319 GQMRER 324
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPER 255
G + + Y VL L + A RL + M + GV +V YN VR G E
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L + D+MR AG P+ ++YN L+ +C+ +D A+++ + E G P+ TF T +
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
LC +G + A K+F E PD + LV G K + EA V + +K P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 375 NVL 377
+V+
Sbjct: 294 DVV 296
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 41/297 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ ++ +AG D A R D M E G ++++FN+++ C R+ D + FDE+ K+
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV-FDEMVKE 256
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+PD +SY L+ +C G S +AL + EM KG+ VT+T++++ + K GN E
Sbjct: 257 -GLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLER 315
Query: 222 AERLWSEMEKKGVDLD-----------------------------------VAAYNVRIT 246
A L EM ++G+ ++ V YN I
Sbjct: 316 AVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI- 374
Query: 247 NTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
N Y G + +EL+ EM G+KPD ++Y+ +++ YCKN A ++ + + ENG
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL 434
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P+A T+ + I LC A+ +FK + + PD T L++G K+ ++ A
Sbjct: 435 PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERA 491
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 8/255 (3%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G SV+++NA+L A + + L FD + ++P+ +Y +L+++ C G +
Sbjct: 118 GYAPSVLAYNAVLLALSDASL-PSARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKE 175
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL +L +M G + VTY T++ + G + AERL M + G+ ++ +N +
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235
Query: 247 NTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E +++ DEM GL PD +SYN L+ YCK EA V+ + G P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL--LVEGLVKKKKIKEAKG 363
+ TF + I+ +C +GN ++A + +E M + N + L++G KK + +A
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVRE--MRERGLQMNEITFTALIDGFCKKGFLDDALL 353
Query: 364 VIRTIKK-KFPPNVL 377
+R +++ + P+V+
Sbjct: 354 AVREMRQCRIQPSVV 368
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 6/278 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G A+ F +M G V++F +L+ ++ ++ L E+ ++
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM-RER 326
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L ++I++ L+ C G D AL + EM ++ + V Y ++N G +EA
Sbjct: 327 GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEA 386
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EME KGV DV Y+ I + Y GD +L +M + G+ PD I+Y+ L+
Sbjct: 387 RELVREMEAKGVKPDVVTYST-ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIR 445
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ + + +A +++ + G P+ T+ + I C GN ++A + E V +P
Sbjct: 446 VLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLP 505
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI--KKKFPPNV 376
D T +L+ GL K + KEA+ ++ + ++ P N+
Sbjct: 506 DVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANI 543
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 7/266 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A R FD M G +V ++N L+ A C R + + +L D + P+ ++Y L
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDM--RGAGCDPNAVTYNTL 198
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ + C +G D+A L++ M G++ VT+ +V+N + K G E+A +++ EM K+G+
Sbjct: 199 VAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGL 258
Query: 235 DLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
D +YN + G E L + EM G+ PD +++ L+ CK ++ A
Sbjct: 259 APDGVSYNTLVGGYCKVGCSHEALS-VFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + E G N TF I C G D A +E P L+ G
Sbjct: 318 GLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGY 377
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVL 377
++ EA+ ++R ++ K P+V+
Sbjct: 378 CMVGRMDEARELVREMEAKGVKPDVV 403
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 133/318 (41%), Gaps = 54/318 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + G D A+ +M + SV+ +NAL+ C R+ D+ L E+ K
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRM-DEARELVREMEAK 396
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +L ++C +G + A +L +M GV +TY++++ L ++ +
Sbjct: 397 -GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGD 455
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL-- 278
A L+ M G+ D Y I + G+ ER L DEM AG+ PD ++Y+ L
Sbjct: 456 AHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLIN 515
Query: 279 ---------------------------------MTC---------------YCKNEMMDE 290
M C +C +M+E
Sbjct: 516 GLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNE 575
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A KVY+ + + + + + + I+ C GN KA K+ + P+ + L+
Sbjct: 576 ADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIR 635
Query: 351 GLVKKKKIKEAKGVIRTI 368
GL +K + EA VI+ +
Sbjct: 636 GLFEKGMVVEADQVIQQL 653
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 4/278 (1%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + G+ GM F + FD+M I+FN+LL C+R L++ LFDE+ +
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNR 368
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D SY LL + C G D A E+L +M K + V+Y+TV++ K G +E
Sbjct: 369 -RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 222 AERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM + LD +YN ++ T G E +++ EM G+K D ++YN L+
Sbjct: 428 ALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K DE KKV+ ++ PN T+ T I G + +A +VF+E
Sbjct: 488 GYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRA 547
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D L++ L K + A +I + K+ PNV+
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVV 585
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 121/224 (54%), Gaps = 3/224 (1%)
Query: 93 KITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+I Q+ + N L+ + + G D A QM +V+S++ ++ ++ +D+
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
LF E+ + N++ D++SY LL + G S++AL++L EM + G++ VTY +L
Sbjct: 429 LNLFGEM-RYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKP 270
KQG +E +++++EM+++ V ++ Y+ I + GG + E+ E + AGL+
Sbjct: 488 GYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRA 547
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
D + Y+ L+ CKN ++ A + + + + G SPN T+ + I
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-NAEEAERLWSE 228
++ L+ ++ SG ++A+ + N M+ G+ VTY V++ K G ++ + + E
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 229 MEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M++ V D +N + + GG E + L DEM + ++ D SYN L+ CK
Sbjct: 330 MQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
MD A ++ + PN ++ T I +G FD+A +F E ++ D +
Sbjct: 390 MDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNT 449
Query: 348 LVEGLVKKKKIKEAKGVIRTI 368
L+ K + +EA ++R +
Sbjct: 450 LLSIYTKVGRSEEALDILREM 470
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--R 255
G T ++ +++ + G EEA +++ M++ G+ ++ YN I G E +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ + DEM+ ++PD I++N L+ + + + A+ +++ + + ++ T +
Sbjct: 323 VAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLD 382
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+C G D A+++ + +P+ + +++G K + EA
Sbjct: 383 AICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ YG+ G +D + F +M ++++++ L+ ++ LY + +F E K
Sbjct: 485 LLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREF-KSA 543
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D + Y L+ + C +G A+ L++EM +G+ VTY ++++ G +
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF---GRSATM 600
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
ER + +A + +T T G R+ +L ++ G N MT
Sbjct: 601 ERSADYSNGGSLPFSSSALS-ELTETEG---NRVIQLFGQLTSEG--------NNRMTKD 648
Query: 283 CKNEMMDEA--KKVYEGLEENGCSPNATTFRTWIYHLCGSGN-FDKAYKVFKESVMVHKI 339
CK M + + +V+ + + PN TF I + C N F+ A + +E +
Sbjct: 649 CKEGMQELSCILEVFRKMHQLEIKPNVVTFSA-ILNACSRCNSFEDASMLLEELRLFD-- 705
Query: 340 PDFNTVKLLVEGLVKKKK 357
N V +V GL+ ++
Sbjct: 706 ---NKVYGVVHGLLMGQR 720
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 183/369 (49%), Gaps = 31/369 (8%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+S +HY V A + + AK +++ + LI + + E + C ++R Y
Sbjct: 88 WSEKQRHYEHSVR---AYHMMIESTAKIRQYKLMWDLINAMMKKKMLNVETF-CIVMRKY 143
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+A D A+ F+ M++ P ++++FN LL A +S+ K +F+ + ++ +PD
Sbjct: 144 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDRF--TPD 201
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y +LL+ + KA E+ EM + G VTY+ +++ L K G +EA +
Sbjct: 202 SKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVR 261
Query: 228 EMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCK 284
M+ Y+V + +TYG + RL+E +D EM +G+K D +N L+ +CK
Sbjct: 262 SMDPSICKPTTFIYSV-LVHTYGTET-RLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 319
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
M +V + ++ G +PN+ + + HL G D+A+ VF++ + V + PD +T
Sbjct: 320 TNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKVCE-PDADT 378
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK--FP---------------PNVLRAWKKVEE-- 385
++++ +KK+++ A V + ++KK FP PN +A +EE
Sbjct: 379 YTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMI 438
Query: 386 ELGLVPAPA 394
E+G+ P+ A
Sbjct: 439 EMGIRPSGA 447
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 5/198 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG + A+ TF +M+ G V FN+L+ A ++ V + E+ K
Sbjct: 278 LVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSK- 336
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P+ S ++L+ D G D+A ++ +M K E TYT ++ ++ E A
Sbjct: 337 GVTPNSKSCNIILRHLIDRGEKDEAFDVFRKM-IKVCEPDADTYTMMIKMFCEKKEMETA 395
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE--LIDEMRDAGLKPDTISYNFLMT 280
+++W M KKGV + ++V I N +P K L++EM + G++P ++ L
Sbjct: 396 DKVWKYMRKKGVFPSMHTFSVLI-NGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQ 454
Query: 281 CYCKNEMMDEAKKVYEGL 298
K + D K + E +
Sbjct: 455 LLLKEDREDVLKFLNEKM 472
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 167/313 (53%), Gaps = 10/313 (3%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V LAK +++ + ++ + + E + ++R Y +A FD A+ TF+ M+ G
Sbjct: 110 VVASLAKIRQYQLMWDVVAVMRKEGVANVETF-SIIMRKYARAQKFDEAVYTFNIMERYG 168
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ +FN+LL A +S+ K +FD++ ++ SPD +Y +LL+ + + K
Sbjct: 169 VAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNRF--SPDAKTYSILLEGWGRAPNLPKM 226
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
E+ ++M G + VTY +++ L K G EEA + +M +G Y+V + +
Sbjct: 227 REVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSV-LVH 285
Query: 248 TYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
TYG D R+++ + +M G+ PD + YN L+T +CK + D A +V + +E +G S
Sbjct: 286 TYGVDM-RIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGIS 344
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PN+ T+ + L G D+AY+VF+ + K PD +T ++++ + KI+ A V
Sbjct: 345 PNSRTWNIILNTLISLGKDDEAYRVFRNMIKRCK-PDSDTYTMMIKMFCENDKIEMALKV 403
Query: 365 IRTIK-KKFPPNV 376
+ ++ K+F P++
Sbjct: 404 WKYMRLKQFLPSM 416
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S KA + +E+++ GV VT VL L G W+ +K+G A+
Sbjct: 48 SCRKASAVEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARRQKRGG----CAHT 103
Query: 243 VRITNTYGGDPERLKE------LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
VR +T ++++ ++ MR G+ + +++ +M Y + + DEA +
Sbjct: 104 VRSYHTVVASLAKIRQYQLMWDVVAVMRKEGV-ANVETFSIIMRKYARAQKFDEAVYTFN 162
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEG 351
+E G + N F + + LC S N KA ++F + M ++ PD T +L+EG
Sbjct: 163 IMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDK--MNNRFSPDAKTYSILLEG 216
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 17/298 (5%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
IE N Q+ Y +LIRSYG AG+F +++ F M ++G SV++FN+LL +
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
LFDE+ + Y ++PD ++ L+ C + D+A + +ME V
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRITNTYGGDPERLKELIDE 262
TY T+++ L + G + A + S M KK D+ +V +Y + +K+ IDE
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC------MKQEIDE 299
Query: 263 -------MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE--NGCSPNATTFRTW 313
M GLKP+ ++YN L+ + DE K + G + +P+A TF
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNIL 359
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I C +G+ D A KVF+E + + PD + +L+ L + + A+ + + +K
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP-ILFDEIPKK 161
L+R Y D A+ F M G + +++N L+ + + YD++ IL
Sbjct: 287 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 346
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD ++ +L+K+HCD+G D A+++ EM N + + +Y+ ++ L + +
Sbjct: 347 TTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDR 406
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
AE L++E+ +K V L G D KP +YN +
Sbjct: 407 AETLFNELFEKEVLL-------------GKDE--------------CKPLAAAYNPMFEY 439
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N +A+KV+ L + G + +++T I C G F AY++ + +PD
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPD 498
Query: 342 FNTVKLLVEGLVK 354
T +LL++GL+K
Sbjct: 499 LETYELLIDGLLK 511
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 4/332 (1%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP L + S+ + S + DL +R L K + + + ++D +
Sbjct: 88 DPLLGLKFFE-FSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSI 146
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L L+ SY + G D A +++ G S +N LL + L D+ +LF E
Sbjct: 147 LELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL 206
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ Y PD S+ +L++ C G DKA E M N G V+Y T++N +
Sbjct: 207 EPY-FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEI 265
Query: 220 EEAERLWSE-MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
+ L E M KGV DV Y I+ GD + EL DEM +G+KP+ ++N
Sbjct: 266 SKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNV 325
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + K M A +YE + GC P+ TF + I C G ++ K+++E + +
Sbjct: 326 LIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN 385
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
P+ T +L+ L K+ +I+EA+ +R +K
Sbjct: 386 LSPNVYTYAVLINALCKENRIREARNFLRHLK 417
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 134/341 (39%), Gaps = 38/341 (11%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRT 119
S + + + L K + L H +P + Y N LIR + G D A
Sbjct: 178 SPFVYNNLLNMLVKQNLVDEAVLLFREHL-EPYFVPDVYSFNILIRGLCRIGEIDKAFEF 236
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F M G ++S+N L+ R K L E +SPD I+Y ++ +C
Sbjct: 237 FQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYC 296
Query: 180 DSGSSDKALELLNEMENKGVEVT-----------------------------------TV 204
G A EL +EM + G++ V
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEM 263
T+T++++ ++G + +LW EM+ + + +V Y V I + R + + +
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+ + + P YN ++ +CK +DEA + ++E C P+ TF I C G
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+A F + + ++ +PD T+ L+ L+K EA +
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 4/332 (1%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP L + S+ + S + DL +R L K + + + ++D +
Sbjct: 88 DPLLGLKFFE-FSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSI 146
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L L+ SY + G D A +++ G S +N LL + L D+ +LF E
Sbjct: 147 LELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHL 206
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ Y PD S+ +L++ C G DKA E M N G V+Y T++N +
Sbjct: 207 EPY-FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEI 265
Query: 220 EEAERLWSE-MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
+ L E M KGV DV Y I+ GD + EL DEM +G+KP+ ++N
Sbjct: 266 SKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNV 325
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + K M A +YE + GC P+ TF + I C G ++ K+++E + +
Sbjct: 326 LIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN 385
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
P+ T +L+ L K+ +I+EA+ +R +K
Sbjct: 386 LSPNVYTYAVLINALCKENRIREARNFLRHLK 417
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 134/341 (39%), Gaps = 38/341 (11%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRT 119
S + + + L K + L H +P + Y N LIR + G D A
Sbjct: 178 SPFVYNNLLNMLVKQNLVDEAVLLFREHL-EPYFVPDVYSFNILIRGLCRIGEIDKAFEF 236
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F M G ++S+N L+ R K L E +SPD I+Y ++ +C
Sbjct: 237 FQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYC 296
Query: 180 DSGSSDKALELLNEMENKGVEVT-----------------------------------TV 204
G A EL +EM + G++ V
Sbjct: 297 KLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVV 356
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEM 263
T+T++++ ++G + +LW EM+ + + +V Y V I + R + + +
Sbjct: 357 TFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHL 416
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+ + + P YN ++ +CK +DEA + ++E C P+ TF I C G
Sbjct: 417 KSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRM 476
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+A F + + ++ +PD T+ L+ L+K EA +
Sbjct: 477 VEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG A R +M + G V+++ L+ C R + + + + + ++
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P+ ++Y L C G A ELL+EM NKG+E+ TY +++N L K GN E+
Sbjct: 458 --VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQ 515
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ +EME G DV Y I T G+ +R ++ EM D G+KP +YN LM
Sbjct: 516 AMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMN 575
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C + ++ KK+ E + E PN T+ + + C N +++K P
Sbjct: 576 GFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAP 635
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ NT +L++G K + +KEA
Sbjct: 636 NENTYNILIKGHCKARNMKEA 656
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 12/281 (4%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
LCN G A+R + M G + F ++ C++ L LF+E+
Sbjct: 332 LCN-------KGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDL-AAARRLFEEM 383
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ L+ D++++ L+ C +G +A +L EM +KG++V VTYT +++ K+GN
Sbjct: 384 QKR-GLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
EA R+ +EM + V +V Y GD EL+ EM + GL+ + +YN
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK +++A ++ +E G + T+ T I LC SG FD+A+ + +E +
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
P T +L+ G +++ K ++ ++K PNV+
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVV 603
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 14/280 (5%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYDKVP 152
++ P CN + S D A+ F ++ + ++V S N LL A + RL D
Sbjct: 224 LSPSPESCNAVLSRLP---LDEAIALFRELPD----KNVCSHNILLKALLSAGRLKDACQ 276
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
FDE+ PD ++YG ++ +C G + A++LL+EM KG+E YT+V+
Sbjct: 277 -HFDEMSSP----PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIAL 331
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPD 271
L +G +A R+ +M GV LD + I+ GD + L +EM+ GL D
Sbjct: 332 LCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAAD 391
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+++ L+ C+ + EA +V + + + G + T+ I C GN +A++V
Sbjct: 392 RVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHN 451
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
E V P+ T L +GL K+ ++ A ++ + K
Sbjct: 452 EMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNK 491
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 39/231 (16%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G + AMR +M+ G R+ +Y
Sbjct: 502 SLINGLCKFGNLEQAMRIMTEMEAAG---------------HRTDVY------------- 533
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+Y L+ + C SG D+A +L EM +KG++ + TY ++N G E
Sbjct: 534 --------TYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEG 585
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLM 279
++L M +K V +V YN + Y D + E+ M + P+ +YN L+
Sbjct: 586 GKKLLEWMLEKNVRPNVVTYN-SLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+CK M EA ++ + E G A+++ I L F +A F
Sbjct: 645 KGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFF 695
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL------- 154
LI + ++G FD A +M + G S+ ++N L+ C R+ +L
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597
Query: 155 -------FDEIPKKY-------------------NLSPDKISYGLLLKSHCDSGSSDKAL 188
++ + K+Y ++P++ +Y +L+K HC + + +AL
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
EM KG+ +T +Y+ ++ L K+ EA + +M +G+ + Y+ + +
Sbjct: 658 YFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDIS 717
Query: 249 YGGDP-ERLKELIDEMRDA 266
+ D E L DE+ +A
Sbjct: 718 FNEDNLESTITLCDELVEA 736
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 169/357 (47%), Gaps = 17/357 (4%)
Query: 19 SSTTASSISVSKAKSKLRSEF----DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAK 74
S AS+ + S + KLR+ F + ALD++ + + P + + LT +A
Sbjct: 20 SGGGASARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTA--IAN 77
Query: 75 SKRFSDIETLIESHKNDP--KITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
+R+ ET+I + I+ + Y LI + + A+ +M +LG S
Sbjct: 78 LRRY---ETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPS 134
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+++F +LL C R+R++D ++ + Y P+ + Y L+ C +G + ALEL
Sbjct: 135 IVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY--EPNVVVYNTLIDCLCKNGDVNIALEL 192
Query: 191 LNEMENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNT 248
LNEME KG + VTY T+L L G +A R+ +M K+ ++ DV + I
Sbjct: 193 LNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFV 252
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G+ + +EL +M + + P+T++YN L+ C + + AKK ++ + GC PN
Sbjct: 253 KQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVV 312
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
T+ T I C S + K+F+ + D T L+ G + K++ AK +
Sbjct: 313 TYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIF 369
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 8/312 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
Y+ + + + RFS L+ P I L +L+ + Q F A+
Sbjct: 651 YSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVT---LGSLLNGFCQGNRFQEAVSL 707
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
D M ELG +V+ +N ++ ++R + +F + KK + D ++Y L+ C
Sbjct: 708 VDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK-GIVADAVTYNTLISGLC 766
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+SG A LL +M + ++ + +T +++ K+GN EA+ L+ EM ++ V ++
Sbjct: 767 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNIL 826
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
YN I G K + D M G PD ++YN L+T +CK++ +++ K++ +
Sbjct: 827 TYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 886
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G +A T+ T I+ C +G + A KVF V PD T +L++ L KI
Sbjct: 887 THQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKI 946
Query: 359 KEAKGVIRTIKK 370
++A ++ ++K
Sbjct: 947 EKALVMVEDLQK 958
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 120/302 (39%), Gaps = 38/302 (12%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD + F +M+ LG + SF L+ R + L ++ K P ++ G
Sbjct: 631 FDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKM-MKLGFQPSIVTLG 689
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL C +A+ L++ M G+E V Y TV+N L K + A ++ MEKK
Sbjct: 690 SLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK 749
Query: 233 GVDLDVAAYNVRITNTYGG----DPERL-------------------------------- 256
G+ D YN I+ D RL
Sbjct: 750 GIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 809
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
K L EM + P+ ++YN L+ +C + +AK +++ + GC P+ T+ T I
Sbjct: 810 KNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITG 869
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
C S + K+F E + D T L+ G + K+ A+ V R + PP+
Sbjct: 870 FCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPD 929
Query: 376 VL 377
++
Sbjct: 930 IV 931
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 36/266 (13%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A F +M + S++ F +L A + +D V LF ++ + +S D S+
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKM-ENLGISHDLYSFT 654
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ C AL LL +M G + + VT ++LN + +EA
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEA---------- 704
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
L+D M + GL+P+ + YN ++ CKN ++ A
Sbjct: 705 ------------------------VSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL 740
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+++ G+E+ G +A T+ T I LC SG + A ++ ++ V P+ L++
Sbjct: 741 EIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 800
Query: 353 VKKKKIKEAKGVIR-TIKKKFPPNVL 377
VK+ + EAK + + I++ PN+L
Sbjct: 801 VKEGNLLEAKNLYKEMIRRSVHPNIL 826
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQ 96
D + AL+I+ + K V+ + + L S R++D L+ K DP +
Sbjct: 735 DLNNALEIFYGMEK--KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI- 791
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
+ LI ++ + G A + +M +++++N+L+ C + RL D +F
Sbjct: 792 --FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGD-AKHMF 848
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D + K PD ++Y L+ C S + ++L EM ++G+ TY T+++ +
Sbjct: 849 DLMVSK-GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTIS 274
G A+++++ M GV D+ YN+ + G E+ ++++++ + D I+
Sbjct: 908 AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
YN ++ C+N+ + EA ++ L G +A + T I LC +G
Sbjct: 968 YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G A FD M G V+++N L+ +S+ + LF E+ +
Sbjct: 830 SLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D +Y L+ +C +G + A ++ N M + GV VTY +L+CL G E+
Sbjct: 890 -GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEK 948
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A + +++K +D+D+ YN+ I D ++KE L + G+K D I+Y +
Sbjct: 949 ALVMVEDLQKNQMDVDIITYNIIIQGMCRND--KVKEAWCLFRSLTRKGVKLDAIAYITM 1006
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPN 306
++ C+N + EA K+ ++E+G P+
Sbjct: 1007 ISGLCRNGLRREADKLCTRMKEDGFMPS 1034
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +G + A R M + V +F AL+ A + D+ L+ ++ +
Sbjct: 212 LLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS- 270
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ ++Y L+ C G A + + M +KG VTY T++N K E+
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDG 330
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ M ++G+ D YN I G K++ M G+ PD I++ L+
Sbjct: 331 MKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHG 390
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N + A + + + I+ LC + ++A+++F + PD
Sbjct: 391 LCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPD 450
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +++ GL K +EA + R +K+
Sbjct: 451 ARTYTIMILGLCKNGPRREADELFRRMKE 479
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G HA +TFD M G +V+++N L+ +SR + LF + ++
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D +Y L+ +C G A ++ + M + GV +T+ +L+ L G
Sbjct: 341 -GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A +++M L + AYN+ I D E EL + G+KPD +Y ++
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459
Query: 281 CYCKNEMMDEAKKVYEGLEENG 302
CKN EA +++ ++E+G
Sbjct: 460 GLCKNGPRREADELFRRMKEDG 481
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 37/206 (17%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
KSKR D L + + LI Y QAG + A + F++M + G P
Sbjct: 870 FCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVP-- 927
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
PD ++Y +LL C++G +KAL ++
Sbjct: 928 ----------------------------------PDIVTYNILLDCLCNNGKIEKALVMV 953
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
+++ ++V +TY ++ + + +EA L+ + +KGV LD AY I+
Sbjct: 954 EDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRN 1013
Query: 251 GDPERLKELIDEMRDAGLKPDTISYN 276
G +L M++ G P Y+
Sbjct: 1014 GLRREADKLCTRMKEDGFMPSERIYD 1039
>gi|357129559|ref|XP_003566429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Brachypodium distachyon]
Length = 461
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 131/255 (51%), Gaps = 7/255 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R+ +G DHA FD+M + +V++F L+ A C+ RL D+ L + + ++
Sbjct: 155 LMRAAAASGSVDHARLLFDEMVQRRIAPTVVTFGTLVAAFCSSGRL-DEAFDLKEAMARQ 213
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEME-NKGVEVTTVTYTTVLNCLYKQGNAE 220
YN+ P+ Y L+K C SG +D A+ L EM N + + + Y T++ L++ G
Sbjct: 214 YNVRPNAHVYASLMKGLCQSGDADNAVRLKEEMAGNAELGLDSAIYATLVRALFRVGRKG 273
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
E L EM+ +G+ +D +N I + D L ++D+M+ +G K DT+SYN
Sbjct: 274 EVVGLLEEMKGRGIAVDRVVHNAMIAG-FCEDEMDLDAAFVVLDDMQKSGCKADTVSYNT 332
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK +A ++ E + GCSP+ T+R +C G F +A +V E V
Sbjct: 333 LVAGLCKLGRWRDANELVEDMPRRGCSPDVVTYRMLFDGMCAVGEFHEANQVLDEMVFKG 392
Query: 338 KIPDFNTVKLLVEGL 352
P + VK V+G+
Sbjct: 393 FAPSKDGVKRFVQGI 407
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 180/385 (46%), Gaps = 43/385 (11%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSS--RYA---QDLTVRRLAKSKRFSDIETLIES 87
+ LR E DP AL ++ + S ASP+ + RY+ DL + ++A ++ F +E+L+ S
Sbjct: 13 AALRREPDPAAALRLFLNPSSAAASPIPTPFRYSLRCYDLIISKVAAARLFPAMESLLSS 72
Query: 88 HKNDPKITQEPYLCNLIRSYGQ-----------------AGMFDHAMRTF--------DQ 122
+ +EP LC +I +YG+ A A+ T
Sbjct: 73 LRTSSLSPREPLLCCVISAYGRARLPAAARRAFAHPAFPAPRTSRALNTLLHALLVCHTP 132
Query: 123 MDEL-------GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+DEL ++N L+ A S D +LFDE+ ++ ++P +++G L+
Sbjct: 133 LDELFSVCRDADVSPDACTYNILMRAAAASGSVDHARLLFDEMVQR-RIAPTVVTFGTLV 191
Query: 176 KSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG- 233
+ C SG D+A +L M + V Y +++ L + G+A+ A RL EM
Sbjct: 192 AAFCSSGRLDEAFDLKEAMARQYNVRPNAHVYASLMKGLCQSGDADNAVRLKEEMAGNAE 251
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM-MDEA 291
+ LD A Y + + G + L++EM+ G+ D + +N ++ +C++EM +D A
Sbjct: 252 LGLDSAIYATLVRALFRVGRKGEVVGLLEEMKGRGIAVDRVVHNAMIAGFCEDEMDLDAA 311
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
V + ++++GC + ++ T + LC G + A ++ ++ PD T ++L +G
Sbjct: 312 FVVLDDMQKSGCKADTVSYNTLVAGLCKLGRWRDANELVEDMPRRGCSPDVVTYRMLFDG 371
Query: 352 LVKKKKIKEAKGVI-RTIKKKFPPN 375
+ + EA V+ + K F P+
Sbjct: 372 MCAVGEFHEANQVLDEMVFKGFAPS 396
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 4/271 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+ +L+R++ +AG+F +++ F M G SV++FN+LL + + ++DE+
Sbjct: 151 FFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
Y ++PD ++ +L++ C +G D + N++ G E VTY T+++ L + G
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 219 AEEAERLWSEMEKKGVDL--DVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISY 275
A + M KK VDL +V Y I + E+ + +EM + GLK + I+Y
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGC-SPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
N L+ C+ ++ K + EG +G SP+ TF T ++ C +GN D A KVF+
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ PD T LV L + ++A+ ++
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLL 421
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 28/255 (10%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y + A+ F++M G + I++N L+ +R ++K+ + +
Sbjct: 298 LIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDG 357
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD ++ L+ HC +G+ D AL++ M ++ + TY+ ++ L + G+ E+A
Sbjct: 358 TFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKA 417
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E L ++ ++ + L GD G KP +YN +
Sbjct: 418 EDLLDKLLERKILLS-------------GD--------------GCKPLVAAYNPIFKYL 450
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ +A+K + L G + + +++T I C G F+ Y++ + PDF
Sbjct: 451 CETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDF 509
Query: 343 NTVKLLVEGLVKKKK 357
T + L+ GL+ K
Sbjct: 510 ETYESLINGLLHMDK 524
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG---VDLDVAA 240
+ KAL+ N + G T +Y ++L L + + A +EK+ V L+
Sbjct: 92 TSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARF 151
Query: 241 YN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EG 297
+N +R N G E +K + M+ G+ P +++N L+T K + AKKVY E
Sbjct: 152 FNSLMRNFNRAGLFQESIK-VFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L G +P+ TF I C +G D +++F + PD T LV+GL + K
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 358 IKEAKGVIRTIKKK---FPPNVL 377
+ A V++ + KK PNV+
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVV 293
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 4/271 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+ +L+R++ +AG+F +++ F M G SV++FN+LL + + ++DE+
Sbjct: 151 FFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
Y ++PD ++ +L++ C +G D + N++ G E VTY T+++ L + G
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 219 AEEAERLWSEMEKKGVDL--DVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISY 275
A + M KK VDL +V Y I + E+ + +EM + GLK + I+Y
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGC-SPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
N L+ C+ ++ K + EG +G SP+ TF T ++ C +GN D A KVF+
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ PD T LV L + ++A+ ++
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLL 421
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 28/255 (10%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y + A+ F++M G + I++N L+ +R ++K+ + +
Sbjct: 298 LIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDG 357
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD ++ L+ HC +G+ D AL++ M ++ + TY+ ++ L + G+ E+A
Sbjct: 358 TFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKA 417
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E L ++ ++ + L GD G KP +YN +
Sbjct: 418 EDLLDKLLERKILLS-------------GD--------------GCKPLVAAYNPIFKYL 450
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ +A+K + L G + + +++T I C G F+ Y++ + +PDF
Sbjct: 451 CETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDF 509
Query: 343 NTVKLLVEGLVKKKK 357
T + L+ GL+ K
Sbjct: 510 ETYESLINGLLHMDK 524
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 10/203 (4%)
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG---VDLDVAA 240
+ KAL+ N + G T +Y ++L L + + A +EK+ V L+
Sbjct: 92 TSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARF 151
Query: 241 YN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EG 297
+N +R N G E +K + M+ G+ P +++N L+T K + AKKVY E
Sbjct: 152 FNSLMRNFNRAGLFQESIK-VFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L G +P+ TF I C +G D +++F + PD T LV+GL + K
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 358 IKEAKGVIRTIKKK---FPPNVL 377
+ A V++ + KK PNV+
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVV 293
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 137/257 (53%), Gaps = 3/257 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Y +AG+ A+ F++M++ G +SF+ ++ + + R + + FD + K+
Sbjct: 184 LVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSL--KH 241
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I Y L+ C +G KA E+ ++M+ GV+ TY+ V++ L + G A
Sbjct: 242 KFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRA 301
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++SEM G D + +N + + G E++ ++ ++M+ G DTISYNFL+
Sbjct: 302 HDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIES 361
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK+E +DEA KV + + + G +PNA+TF + + + + A++++ + + +P+
Sbjct: 362 HCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPN 421
Query: 342 FNTVKLLVEGLVKKKKI 358
T +L+ K I
Sbjct: 422 TLTYNILMRMFADSKSI 438
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 133/275 (48%), Gaps = 15/275 (5%)
Query: 67 LTVRRLAKSKRFSDIETLIES--HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
+ + L K +R S+ E +S HK +P + +L+ + +AG A F M
Sbjct: 218 IVISSLCKKRRASEAELFFDSLKHKFEPDVI---VYTSLVHGWCRAGDIAKAEEVFSDMK 274
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
E G +V +++ ++ + R + +F E+ P+ +++ L++ H +G +
Sbjct: 275 EAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDA-GCDPNAVTFNSLMRVHVKAGRT 333
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+K L++ N+M+ G T++Y ++ K N +EA ++ M KKGV + + +N
Sbjct: 334 EKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFN-- 391
Query: 245 ITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ +G D + +M++ P+T++YN LM + ++ +D K+ + ++
Sbjct: 392 --SIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMD 449
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
E+ PN T+R I C G+++ AY + KE V
Sbjct: 450 ESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMV 484
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 175/383 (45%), Gaps = 27/383 (7%)
Query: 4 LRHIRRLCTATTAAG------SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHY-A 56
L H RLC+++ ++TT + ++S + + +F ++ + HY
Sbjct: 20 LPHTFRLCSSSPLVSEHDTNDNNTTPQNTNLSPEDTHIVDKF--------HTIIKDHYRK 71
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDH 115
+P + + L + S FS I T+ + P IT+ C+ +R F
Sbjct: 72 NPNPNAVSPSLNLSIPDLSIEFSKISTV---YSVSPSITRRAIEKCSGVR---HGIPFLQ 125
Query: 116 AMRTFDQMDEL-GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
++ F+ L G P S +N ++ + R +D L D + K + ++ +L
Sbjct: 126 SLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLID-LMKSRGVRITVSTFSVL 184
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
++ + +G + +A+ N ME+ G + V+++ V++ L K+ A EAE + ++ K
Sbjct: 185 VRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK-F 243
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+ DV Y + GD + +E+ +M++AG+KP+ +Y+ ++ C+ + A
Sbjct: 244 EPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHD 303
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
V+ + + GC PNA TF + + +G +K +V+ + + D + L+E
Sbjct: 304 VFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHC 363
Query: 354 KKKKIKEAKGVIRT-IKKKFPPN 375
K + + EA V+ T +KK PN
Sbjct: 364 KDENLDEAVKVLDTMVKKGVAPN 386
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 67 LTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
L ++ K + + E ++ E K D + E LI Y + G A+R D+M +
Sbjct: 141 LLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLK 200
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+G ++ N+L+ C ++++ +L +K +L PD SY L+ +C G S
Sbjct: 201 VGLKMNLFVCNSLINGYCKNGQVHEGERLLM--CMRKLDLKPDSYSYCTLVDGYCRDGLS 258
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
KA + ++M KG+E T VTY T+L L + G+ ++A RLW M ++GV + Y
Sbjct: 259 SKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTL 318
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ + GD R L D++ G+ ++N ++ CK MD AK+ ++ +EE GC
Sbjct: 319 LDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGC 378
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+RT C GN ++A+K+ ++ P L+ GL KKI +
Sbjct: 379 KPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLID 438
Query: 364 VIRTIKKK-FPPNVL 377
++ + + PNV+
Sbjct: 439 LLAEMDTRGLSPNVV 453
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 11/253 (4%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
S+ +N+L+ S+ K+ L E+ + LSP+ ++YG L+ CD G DKA
Sbjct: 416 SIEMYNSLIVGLFTSKKISKLIDLLAEMDTR-GLSPNVVTYGALIAGWCDQGRLDKAFSA 474
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
EM KG + + +++ LY+ G +EA L +M VD D+ + + +
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM----VDFDLVLDHRCLEDFQN 530
Query: 251 GDPERLK--ELIDEMRDAGLK---PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
D +L ++ D + ++ +K P+ + YN M CK+ +++A++ + GL +P
Sbjct: 531 ADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTP 590
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I+ +G ++A+ + E V +P+ T L+ GL K + A+ +
Sbjct: 591 DNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLF 650
Query: 366 RTIK-KKFPPNVL 377
+ K PNV+
Sbjct: 651 DKLHLKGLIPNVV 663
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 46/300 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT-RSRLYDKVPILFDEIPKK 161
+++ Y + GM +A+ FD M + G S+ S N+LL R Y V +++D++ ++
Sbjct: 2 ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAV-LVYDQM-RR 59
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY--------------- 206
++ PD + +++ ++C +G ++A+E + EME G E+ V+Y
Sbjct: 60 LDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEG 119
Query: 207 --------------------TTVLNCLYKQGNAEEAERLWSEMEKK-GVDLDVAAYNVRI 245
T ++ KQ EEAE++ EMEK+ GV +D AY I
Sbjct: 120 AKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALI 179
Query: 246 TNTYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
GD R++ DEM GLK + N L+ YCKN + E +++ + +
Sbjct: 180 DGYCKVGKMGDAIRVR---DEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKL 236
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P++ ++ T + C G KA+ V + + P T L++GL + K+A
Sbjct: 237 DLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDA 296
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ + L KS + +D + C LI + AG + A D+M
Sbjct: 561 NIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVN 620
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G ++ ++NALL +S D+ LFD++ K L P+ ++Y +L+ +C SGS
Sbjct: 621 KGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLK-GLIPNVVTYNILIDGYCKSGSPR 679
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+AL+L +M +G+ + +TY++++N KQ + EEA +L +EM+ VD +A ++ +
Sbjct: 680 EALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLV 739
Query: 246 TNTYG-GDPERLKELIDEMRDA 266
GD +++ +L + M A
Sbjct: 740 EGCIQHGDVKKMSKLHNMMHMA 761
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
K+ DE K++L P+ + Y + + C SG + A + + TY T+
Sbjct: 540 KIADTLDESAIKFSL-PNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTL 598
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
++ G EA L EM KG+ ++ YN + G +R + L D++ GL
Sbjct: 599 IHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGL 658
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ ++YN L+ YCK+ EA + + + G SP+ T+ + I C + ++A K
Sbjct: 659 IPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMK 718
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVE 384
+ E + T LVEG ++ +K+ + + P + + K++E
Sbjct: 719 LLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQME 774
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 156/360 (43%), Gaps = 48/360 (13%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN- 102
AL ++ ++ K+ P S R L + + + +S + L+ I + + C
Sbjct: 15 ALHVFDNMGKYGRKP-SLRSCNSLLSNLVKRGESYSAV--LVYDQMRRLDIVPDVFTCAI 71
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-----------------FACTRS 145
++ +Y +AG + A+ +M++LG + +S+N+L+ F +
Sbjct: 72 MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131
Query: 146 RLYDKVPI------------------LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +KV + + E+ K+ + D+ +YG L+ +C G A
Sbjct: 132 VMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA 191
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ + +EM G+++ +++N K G E ERL M K + D +Y + +
Sbjct: 192 IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSY-CTLVD 250
Query: 248 TY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
Y G + + D+M G++P ++YN L+ C+ +A +++ + + G +P
Sbjct: 251 GYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTP 310
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESV---MVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
N + T + L G+F +A ++ + + + I FNT ++ GL K ++ AK
Sbjct: 311 NEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNT---MINGLCKMGEMDGAK 367
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 170/331 (51%), Gaps = 14/331 (4%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+S +HY V A + + AK +++ + LI + + + E + C ++R Y
Sbjct: 123 WSEKQRHYEHSVR---AYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETF-CIVMRKY 178
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+A D A+ F+ M++ P ++++FN LL A +S+ K +F+ + ++ +PD
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF--TPD 236
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y +LL+ + KA E+ EM + G VTY+ +++ L K G +EA +
Sbjct: 237 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 296
Query: 228 EMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCK 284
M+ Y+V + +TYG + RL+E +D EM +G+K D +N L+ +CK
Sbjct: 297 SMDPSICKPTTFIYSV-LVHTYGTE-NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
M +V + ++ G +PN+ + + HL G D+A+ VF++ + V + PD +T
Sbjct: 355 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-PDADT 413
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK--FP 373
++++ +KK+++ A V + ++KK FP
Sbjct: 414 YTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 170/331 (51%), Gaps = 14/331 (4%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+S +HY V A + + AK +++ + LI + + + E + C ++R Y
Sbjct: 87 WSEKQRHYEHSVR---AYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETF-CIVMRKY 142
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+A D A+ F+ M++ P ++++FN LL A +S+ K +F+ + ++ +PD
Sbjct: 143 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRF--TPD 200
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y +LL+ + KA E+ EM + G VTY+ +++ L K G +EA +
Sbjct: 201 SKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVR 260
Query: 228 EMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCK 284
M+ Y+V + +TYG + RL+E +D EM +G+K D +N L+ +CK
Sbjct: 261 SMDPSICKPTTFIYSV-LVHTYGTE-NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 318
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
M +V + ++ G +PN+ + + HL G D+A+ VF++ + V + PD +T
Sbjct: 319 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-PDADT 377
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK--FP 373
++++ +KK+++ A V + ++KK FP
Sbjct: 378 YTMVIKMFCEKKEMETADKVWKYMRKKGVFP 408
>gi|125524099|gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 172/377 (45%), Gaps = 23/377 (6%)
Query: 32 KSKLRSE-FDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN 90
K+ +RS P+ D++ S H A ++ R L+V RLA + R D+ I S
Sbjct: 48 KNSIRSAAHTPEALADLFISGLSHPAF-LADRPIFTLSVHRLASAGR-RDLVASILSSSL 105
Query: 91 DPKITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
P +L LI Y AGM DH++ TF + TP S + +ALL A +RL
Sbjct: 106 TSLPAPHPSEGFLIRLISLYSAAGMPDHSLSTF----RIVTPPSDRALSALLSAYHDNRL 161
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTY 206
YD+ F +P + + P +S+ +LLKS SG A L +EM +K VE V+
Sbjct: 162 YDRAIQAFRTLPAELGIKPSVVSHNVLLKSFVASGDLASARALFDEMPSKADVEPDIVSC 221
Query: 207 TTVLNCLYKQGNAEEAERLWSEME-----KKGVDLDVAAYNVRITNTYG-GDPERLKELI 260
+L + ++ + K+ + +V+ YN+R+ + G EL+
Sbjct: 222 NEILKGYLNAADYAAFDQFLKDNTTAAGGKRRLKPNVSTYNLRMASLCSKGRSFEAAELL 281
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE------NGCSPNATTFRTWI 314
D M G+ P+ S+N ++ CK + A +++ + E G PN+ T+ +
Sbjct: 282 DAMEAKGVPPNRGSFNTVIQGLCKEGEVGAAVAIFKRMPEVPRPNGKGVLPNSETYIMLL 341
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
L G F A +VFKE + P F V+ L++GL+K +K K AK V ++K
Sbjct: 342 EGLVNKGVFAPALEVFKECLQNKWAPPFQAVQGLIKGLLKSRKAKHAKEVAMAMRKVVKG 401
Query: 375 NVLRAWKKVEEELGLVP 391
+ WKK E E P
Sbjct: 402 DAKEEWKKFEAEFSFEP 418
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 169/313 (53%), Gaps = 10/313 (3%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V LAK +++ + ++ + + + E + ++R Y +A D A+ TF+ M++ G
Sbjct: 107 VVASLAKIRQYQLMWDVVAVMRREGAVNVETFGI-IMRKYARAQKVDEAVYTFNVMEKYG 165
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ +FN+LL A +S+ K +FD++ ++ SPD +Y +LL+ + + K
Sbjct: 166 VVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRF--SPDAKTYSILLEGWGRAPNLPKM 223
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
E+ +EM + G E VTY +++ L K G EEA R+ +M +G Y+V + +
Sbjct: 224 REVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSV-LVH 282
Query: 248 TYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
TYG + R+++ + +M G+ PD + YN L++ +CK + + A +V +E +G +
Sbjct: 283 TYGVE-MRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGIT 341
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
N+ T+ + HL G D+AYKVF+ + + PD +T ++++ + K++ A V
Sbjct: 342 TNSRTWNIILNHLISLGRDDEAYKVFRRMIKCCQ-PDCDTYTMMIKMFCENDKVEMALKV 400
Query: 365 IRTIK-KKFPPNV 376
+ ++ K+F P++
Sbjct: 401 WKYMRLKQFLPSM 413
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
++G++++ + + D+A+ N ME GV + ++L L K N +A+ ++ +M
Sbjct: 137 TFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKM 196
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+ D Y++ + +G P +++E+ EM DAG +PD ++Y ++ CK
Sbjct: 197 NSR-FSPDAKTYSI-LLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGR 254
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++EA +V + + GC P + ++ + A F + +PD
Sbjct: 255 VEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNA 314
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
LV K KK + A V+ ++ R W + L
Sbjct: 315 LVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHL 354
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 20/317 (6%)
Query: 27 SVSKAKSKLRSEFDPD--------------KALDIYSSVSKHYASPVSSRYAQDLTVRRL 72
+VS+A +K ++ PD KAL + + +H+ S S + D V
Sbjct: 55 TVSEALTKPTIQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSYTHSPSSFDHAVDIA 114
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
A+ + F+ L+ ++ L L Y G A+RTF M E G + +
Sbjct: 115 ARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDL 174
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
SFN LL +S+ + L + ++ PD ++Y +L +C + AL +L
Sbjct: 175 HSFNTLLDILCKSKRVETAHSLLKTLTSRFR--PDTVTYNILANGYCLIKRTPMALRVLK 232
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-- 250
EM +G+E T VTY T+L ++ +EA + EM+K+ ++DV Y + + +G
Sbjct: 233 EMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTT-VIHGFGVA 291
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG-CSPNATT 309
GD ++ K + EM G+ P+ +YN L+ CK + ++ A V+E + G C PN T
Sbjct: 292 GDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVT 351
Query: 310 FRTWIYHLCGSGNFDKA 326
+ I LC G+ ++A
Sbjct: 352 YNVVIRGLCHVGDMERA 368
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 22/328 (6%)
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDH---A 116
S + D T+ +L SD T+ E+ P I P L N + +++H A
Sbjct: 35 SVEHPSDATIAKLVLE---SDPRTVSEA-LTKPTIQWTPDLVNKV----MKRLWNHGPKA 86
Query: 117 MRTFDQMDEL--GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
++ F +D S SF+ + R R ++ L + + L P + +L
Sbjct: 87 LQFFKHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRM-RSLRLGPSPKTLAIL 145
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ + +G +A+ M G+ ++ T+L+ L K E A L + +
Sbjct: 146 AERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-F 204
Query: 235 DLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
D YN+ + N Y P L+ ++ EM G++P ++YN ++ Y ++ + EA
Sbjct: 205 RPDTVTYNI-LANGYCLIKRTPMALR-VLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEA 262
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ Y +++ C + T+ T I+ +G+ KA +VF E V +P+ T L++
Sbjct: 263 WEFYLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQV 322
Query: 352 LVKKKKIKEAKGVIRTIKKK--FPPNVL 377
L KK ++ A V + ++ PNV+
Sbjct: 323 LCKKDSVENAVVVFEEMAREGVCVPNVV 350
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +G AG A R F +M + G +V ++NAL+ + + ++F+E+ ++
Sbjct: 284 VIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREG 343
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++Y ++++ C G ++AL + M G+ TY V+ G E+A
Sbjct: 344 VCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVEKA 403
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY----GGDPERLKELIDEMRDAGLKPDTISYNFL 278
++ +M ++ YNV I+ + D +L+ +M D G P ++N +
Sbjct: 404 LEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRV 463
Query: 279 MTCYCKNEMMDEAKKV 294
+ D AK++
Sbjct: 464 LNGLVITGNQDFAKEI 479
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 144/265 (54%), Gaps = 5/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
I YG+ G + A+ TF++M + G S+ + NA L++ + +F++I
Sbjct: 443 FIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI-HNC 501
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD ++Y +++K + +G DKA +LL EM ++G E + ++++ LYK G +EA
Sbjct: 502 GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEA 561
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLMT 280
+++ ++ + V YN+ IT G + + LK +L M+++G P+T+++N L+
Sbjct: 562 WQMFGRLKDLKLAPTVVTYNILITGL-GKEGKLLKALDLFGSMKESGCPPNTVTFNALLD 620
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C CKN+ +D A K++ + CSP+ T+ T IY L G A+ F + P
Sbjct: 621 CLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFW-FYHQMKKFLSP 679
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
D T+ L+ G+VK ++++A ++
Sbjct: 680 DHVTLYTLLPGVVKDGRVEDAIKIV 704
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 140/277 (50%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +G G + R + +M+ G V+++ L+ A +S D+ + D + +
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLD-VMRVR 396
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y L+ + D+ALEL N ME+ GV T +Y ++ K G+ E+A
Sbjct: 397 GIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKA 456
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M+K+G+ +AA N + + G K++ +++ + GL PD+++YN +M C
Sbjct: 457 LDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKC 516
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K +D+A K+ + GC P+ + I L +G D+A+++F + P
Sbjct: 517 YSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPT 576
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T +L+ GL K+ K+ +A + ++K+ PPN +
Sbjct: 577 VVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTV 613
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL--FDEIPKKYNLSPDKIS 170
D A+ F+ M+ LG + S+ +LF +L D L F+++ KK + P +
Sbjct: 418 LDEALELFNNMESLGVAPTAYSY--VLFIDYYGKLGDPEKALDTFEKM-KKRGIMPSIAA 474
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
L S + G +A ++ N++ N G+ +VTY ++ C K G ++A +L +EM
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534
Query: 231 KKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+G + D+ N I Y G + ++ ++D L P ++YN L+T K +
Sbjct: 535 SEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLL 594
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A ++ ++E+GC PN TF + LC + D A K+F +++ PD T ++
Sbjct: 595 KALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPPN 375
GL+K+ + A +KK P+
Sbjct: 655 YGLIKEGRAGYAFWFYHQMKKFLSPD 680
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 6/198 (3%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F+E+P Y P+ Y +L+ +G+ + A +L M +G+ +YT ++ CL
Sbjct: 915 IFEEMPD-YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECL 973
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKP 270
+ G ++A + E++ G+D D +YN+ I G RL+E L EM++ G+ P
Sbjct: 974 FMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGL--GKSRRLEEALSLFSEMKNRGISP 1031
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ +YN L+ + M+D+A K++E L+ G PN T+ I SGN D+A+ VF
Sbjct: 1032 ELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVF 1091
Query: 331 KESVMVHKIPDFNTVKLL 348
K+ ++V P+ T L
Sbjct: 1092 KKMMIVGCSPNAGTFAQL 1109
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++G++ D +++M G ++I+ N ++ A +S +K L+ EI
Sbjct: 829 LLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISG- 887
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ SP +YG L+ +G S++A+++ EM + + Y ++N K GN A
Sbjct: 888 DFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIA 947
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ M K+G+ D+ +Y + + + G + +E++ GL PDT+SYN ++
Sbjct: 948 CDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMING 1007
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K+ ++EA ++ ++ G SP T+ I H +G D+A K+F+E + P+
Sbjct: 1008 LGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPN 1067
Query: 342 FNTVKLLVEG 351
T L+ G
Sbjct: 1068 VFTYNALIRG 1077
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 148/330 (44%), Gaps = 7/330 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
L+S DP+ AL + VS+ + V + + + L R D+ + + + I
Sbjct: 96 LKSISDPNSALSYFKMVSQ-LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQ-VI 153
Query: 95 TQEP--YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+ P YL + ++ G A +M + G + S+N L++ + +
Sbjct: 154 NRNPNTYL-TIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEAL 212
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
++ + + L P +Y L+ + + ++LL EME G+ TYT +
Sbjct: 213 KVYKRMISE-GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRV 271
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L + G ++A + ME +G DV Y V I G ++ KEL +MR + KPD
Sbjct: 272 LGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPD 331
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++Y LM+ + ++ K+ + +E +G +P+ T+ + LC SG D+A+ +
Sbjct: 332 LVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLD 391
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ +P+ +T L+ GL+ +++ EA
Sbjct: 392 VMRVRGIVPNLHTYNTLISGLLNLRRLDEA 421
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 4/210 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG + AM+ F++M + + +N L+ ++ + LF + K+
Sbjct: 899 LIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE- 957
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +L++ +G D A+ E++ G++ TV+Y ++N L K EEA
Sbjct: 958 GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEA 1017
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+SEM+ +G+ ++ YN I + +G G ++ ++ +E++ GL+P+ +YN L+
Sbjct: 1018 LSLFSEMKNRGISPELYTYNALILH-FGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIR 1076
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ K+ D A V++ + GCSPNA TF
Sbjct: 1077 GHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 3/258 (1%)
Query: 116 AMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A + FD+ + LGT + S+N L+ + + LF E+ K P+ +Y LL
Sbjct: 771 AKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEM-KNAGCCPNIFTYNLL 829
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L +H S D+ EL NEM +G + +T+ +++ L K + +A L+ E+
Sbjct: 830 LDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDF 889
Query: 235 DLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
Y I G E ++ +EM D KP+ YN L+ + K ++ A
Sbjct: 890 SPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACD 949
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+++ + + G P+ ++ + L +G D A F+E + PD + L++ GL
Sbjct: 950 LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLG 1009
Query: 354 KKKKIKEAKGVIRTIKKK 371
K ++++EA + +K +
Sbjct: 1010 KSRRLEEALSLFSEMKNR 1027
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 152/368 (41%), Gaps = 45/368 (12%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP+KALD + + K P S A + ++ LA+ R + + + N
Sbjct: 452 DPEKALDTFEKMKKRGIMP--SIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVT 509
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+++ Y +AG D A + +M G +I N+L+ ++ D+ +F +
Sbjct: 510 YNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRL- 568
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K L+P ++Y +L+ G KAL+L M+ G TVT+ +L+CL K
Sbjct: 569 KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAV 628
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAG------------ 267
+ A +++ M DV YN I YG LI E R AG
Sbjct: 629 DLALKMFCRMTIMNCSPDVLTYNTII---YG--------LIKEGR-AGYAFWFYHQMKKF 676
Query: 268 LKPDTISYNFLMTCYCKNEMMDEA-KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
L PD ++ L+ K+ +++A K V E + ++G + + + + ++A
Sbjct: 677 LSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEA 736
Query: 327 YKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEE 385
F E ++ + I D N + L+ L K+KK +AK + + K +
Sbjct: 737 IS-FAEGLVCNSICQDDNLILPLIRVLCKQKKALDAK---------------KLFDKFTK 780
Query: 386 ELGLVPAP 393
LG P P
Sbjct: 781 SLGTHPTP 788
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 132/331 (39%), Gaps = 73/331 (22%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-------RLYDKVPIL- 154
LI G+ G A+ F M E G P + ++FNALL ++ +++ ++ I+
Sbjct: 583 LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN 642
Query: 155 --------------------------FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
F KK+ LSPD ++ LL G + A+
Sbjct: 643 CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAI 701
Query: 189 ELLNE-MENKGVEVTTVTYTTVLNC----------------------------------- 212
+++ E + G++ + + ++ C
Sbjct: 702 KIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRV 761
Query: 213 LYKQGNAEEAERLWSEMEKK-GVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKP 270
L KQ A +A++L+ + K G +YN + G + E +L EM++AG P
Sbjct: 762 LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ +YN L+ + K++ +DE ++Y + GC PN T I L S + +KA ++
Sbjct: 822 NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
E + P T L+ GL+K + +EA
Sbjct: 882 YEIISGDFSPTPCTYGPLIGGLLKAGRSEEA 912
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G++ + A+ F +M G + ++NAL+ + + D+ +F+E+ +
Sbjct: 1004 MINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL-QFM 1062
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
L P+ +Y L++ H SG+ D+A + +M G T+ + N
Sbjct: 1063 GLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 49/410 (11%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF 78
SS+ + IS S + S D D A+ +++ + + +P + + + L L KSK +
Sbjct: 44 SSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILG--SLVKSKHY 101
Query: 79 SDIETL---IESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+ L +E P + CN LI + Q G+ A F ++ ++G I+
Sbjct: 102 HTVLYLSQKMEFRGIKPNLVN----CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157
Query: 135 FNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
F L+ C + ++ + LF + D+ISYG L+ C G + AL+LL
Sbjct: 158 FTTLIKGLCLKGQI--QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQR 215
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT------- 246
++ V+ V Y T+++ + K EA L+SEM KG+ DV Y+ I+
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGK 275
Query: 247 ---------------------------NTY--GGDPERLKELIDEMRDAGLKPDTISYNF 277
N + G + K + D M G+KP+ ++YN
Sbjct: 276 LNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
LM YC + +++AK ++ + + G +P+ ++ I C FD+A +FKE +
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
IPD T L++GL K +I A ++ + + P +R + + + L
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 143/293 (48%), Gaps = 3/293 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++ + G FD M + G + +++N+L+ + +K +F+ + +
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG- 359
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++PD SY +++ C D+A+ L EM K + VTY+++++ L K G A
Sbjct: 360 GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYA 419
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M +GV + YN + ++ L+ +++D G++P+ +Y+ L+
Sbjct: 420 LQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKG 479
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C++ +++A+KV+EGL G + N T+ I C G F++A + + IPD
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEELGLVPAP 393
T ++++ L KK + A+ ++R I + P + W + ++E + P
Sbjct: 540 AKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIWFQKKKEYDVSSEP 592
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 4/237 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA I++++++ +P Y+ + + K K+F + L + I
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYS--IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++G +A++ DQM + G P ++ ++N++L A + DK L ++ K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +Y +L+K C SG + A ++ + KG + TYT ++ +G E
Sbjct: 465 -GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNE 523
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNF 277
A L S+ME G D Y + I + + D + E L+ EM G++P I+ F
Sbjct: 524 ALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIWF 580
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 173/349 (49%), Gaps = 5/349 (1%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND- 91
S + + + D AL I+ K + + + +L++++ F +E+L+ +N
Sbjct: 52 SMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSY 111
Query: 92 -PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
P E +L+R+YG AG ++ +MR F ++ + G RSV S N LL +++ +D
Sbjct: 112 PPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDL 171
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
V +F + + ++P+ + LL+K+ C + A ++L+E+ G+ VTYTT+L
Sbjct: 172 VHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTIL 231
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGL 268
+G+ E A+R+ EM +G D Y V + + Y G ++D+M +
Sbjct: 232 GGYVARGDMESAKRVLEEMLDRGWYPDAITYTV-LMDGYCKLGRFSEAATVMDDMEKNEI 290
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+P+ ++Y ++ CK + EA+ +++ + + P+++ I LC D+A
Sbjct: 291 EPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACG 350
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
++++ + + +PD + L+ L K+ ++ EA+ + K P++L
Sbjct: 351 LWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGSIPSLL 399
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 41/332 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPR 130
L +++RF + + ++ K IT + CNL +++ + + A + D++ +G
Sbjct: 163 LIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVP 222
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+++++ +L R + +L + + + + PD I+Y +L+ +C G +A
Sbjct: 223 NLVTYTTILGGYVARGDMESAKRVLEEMLDRGW--YPDAITYTVLMDGYCKLGRFSEAAT 280
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-------------------- 229
++++ME +E VTY ++ L K+ + EA ++ EM
Sbjct: 281 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALC 340
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPERLKELI----------------DEMRDAGLKPDTI 273
E VD + + N D L LI DE D G P +
Sbjct: 341 EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLL 399
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN L+ C+ + EA ++++ + E C PNA T+ I L +GN + +V +E
Sbjct: 400 TYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEM 459
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ P+ T +L EGL K K ++A ++
Sbjct: 460 LESGCFPNKTTFLILFEGLQKLGKEEDAIKIV 491
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 3/238 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G F A D M++ + +++ ++ A + + + +FDE+ +
Sbjct: 265 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDR- 323
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++ + C+ D+A L +M +T+++ L K+G EA
Sbjct: 324 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEA 383
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ E +K + + YN I G+ L D+M + KP+ +YN L+
Sbjct: 384 RKLFDEFDKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEG 442
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
KN + E +V E + E+GC PN TTF L G + A K+ +VM K+
Sbjct: 443 LSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKV 500
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G D+A+ D M G V+++ LL A + Y + L DE+ K
Sbjct: 158 LIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDK- 216
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y +++ C G D A+E L + + G E TV+Y VL L E+A
Sbjct: 217 GCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDA 276
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L +EM +KG +V +N+ I+ G E E++D++ G P+++SYN ++
Sbjct: 277 EKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHA 336
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---FKESVMVHK 338
+CK + MD A E + +GC P+ ++ T + LC G D A ++ K+
Sbjct: 337 FCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 396
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ +NTV ++GL K K +EA ++ + K P+++
Sbjct: 397 LISYNTV---IDGLTKAGKTEEALELLNEMVTKGLQPDII 433
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 159/332 (47%), Gaps = 19/332 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ S+ + P + Y ++ ++ L ++R+ D E L+ +
Sbjct: 239 DDAMEFLKSLPSYGCEPNTVSY--NIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFN 296
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G+ + AM DQ+ + G + +S+N +L A + + D+ + F E+
Sbjct: 297 MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA-MAFVELMVS 355
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +SY LL + C G D A+ELL+++++KG ++Y TV++ L K G EE
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-RLKELID---EMRDAGLKPDTISYNF 277
A L +EM KG+ D+ Y+ T + G E R++E I +++D G++P+T+ YN
Sbjct: 416 ALELLNEMVTKGLQPDIITYS---TISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNA 472
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK A ++ + NGC PN +T+ I L G +A ++ E
Sbjct: 473 ILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAE----- 527
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ ++ + LV K I+ G + T K
Sbjct: 528 ----LCSRGVVSKTLVNKGAIRLLDGTMHTSK 555
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 10/302 (3%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQ 122
++ V + + R D +E K+ P EP + +++ A ++ A + +
Sbjct: 226 NVVVNGICQEGRVDDA---MEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 282
Query: 123 MDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M G P +V++FN L+ F C R + + IL D+IPK Y +P+ +SY +L + C
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEIL-DQIPK-YGCTPNSLSYNPILHAFCKQ 340
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
D+A+ + M + G V+Y T+L L + G + A L +++ KG + +Y
Sbjct: 341 KKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 400
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N I T G E EL++EM GL+PD I+Y+ + + C+ ++EA K + +++
Sbjct: 401 NTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQD 460
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G PN + + LC A +F V +P+ +T +L+EGL + +KE
Sbjct: 461 MGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKE 520
Query: 361 AK 362
A+
Sbjct: 521 AR 522
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 149/321 (46%), Gaps = 12/321 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+++L S R ++ ++ S + D ++ Y G D+A R M
Sbjct: 97 IKKLCASGRTAEARRVLASCEPDVMSYNA-----MVAGYCVTGQLDNARRLVAAMP---M 148
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++N L+ C R R + + +L D + + PD ++Y +LL++ C +A
Sbjct: 149 EPDTYTYNTLIRGLCGRGRTDNALAVLDDML--RRGCVPDVVTYTILLEATCKRSGYKQA 206
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++LL+EM +KG VTY V+N + ++G ++A + G + + +YN+ +
Sbjct: 207 VKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266
Query: 248 TYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ E ++L+ EM G P+ +++N L++ C+ +++ A ++ + + + GC+PN
Sbjct: 267 LCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ ++ ++ C D+A + V PD + L+ L + ++ A ++
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386
Query: 367 TIKKKFPPNVLRAWKKVEEEL 387
+K K VL ++ V + L
Sbjct: 387 QLKDKGCTPVLISYNTVIDGL 407
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVA---AYNVRITNTYGGDPERLKELIDEMRDA 266
L L ++G+ EEA RL M G++ A A ++ G E + L A
Sbjct: 63 LRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVL------A 114
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+PD +SYN ++ YC +D A+++ + P+ T+ T I LCG G D A
Sbjct: 115 SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNA 171
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + + +PD T +L+E K+ K+A ++ ++ K
Sbjct: 172 LAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDK 216
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 37/337 (10%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
++Y + + L K+ R + E ++ KN LI +G++G + F
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLF 380
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D+M +++ +++ ++ + LF E+ K L PD+++Y L+ +C
Sbjct: 381 DEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK-GLKPDEVTYTALIDGYCK 439
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G +A L N+M KG+ VTYT +++ L K G + A L EM +KG+ +V
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499
Query: 241 YNVRI---------------------------TNTYG---------GDPERLKELIDEMR 264
YN I T TY G+ + EL+ M
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
D GL+P +++N LM +C + M+++ +++ + + + G PNATTF + + C N
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+++K +PD NT +L++G K + +KEA
Sbjct: 620 ATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEA 656
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 6/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG A +QM E G +V+++ AL+ + D L E+ +K
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK- 491
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y L+ C G+ ++A++L+ EM+ G T+TYTT+++ K G +A
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M KG+ + +NV + G E + LI M D G+ P+ ++N LM
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQ 611
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M ++Y+G+ G P+ T+ I C + N +A+ + KE MV K
Sbjct: 612 YCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE--MVEKGFS 669
Query: 342 FNTVKL--LVEGLVKKKKIKEAKGVIRTIK 369
L++G K+KK +EA+ + ++
Sbjct: 670 LTAASYNSLIKGFYKRKKFEEARKLFEEMR 699
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 8/310 (2%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
+L K K + +E N P + + + Y Q ++ +++ G
Sbjct: 264 QLGKVKEAHSLLIQMEFRGNVPDVVSYSVI---VDGYCQVEQLGKVLKLMEELQRKGLKP 320
Query: 131 SVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ ++N+++ F C R+ + +L + K + PD + Y L+ SG+ +
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVL--RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYK 378
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
L +EM+ K + VTYT++++ L + G EA +L+SEM KG+ D Y I
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYC 438
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G+ + L ++M + GL P+ ++Y L+ CK +D A ++ + E G PN
Sbjct: 439 KAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT- 367
T+ I LC GN ++A K+ +E + PD T +++ K ++ +A ++R
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIM 558
Query: 368 IKKKFPPNVL 377
+ K P ++
Sbjct: 559 LDKGLQPTIV 568
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 120/226 (53%), Gaps = 7/226 (3%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LFDE+ +K + PD ++Y ++ C +G +A +L +EM +KG++ VTYT +++
Sbjct: 379 LFDEMKRK-KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGY 437
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
K G +EA L ++M +KG+ +V Y + G+ + EL+ EM + GL+P+
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ CK +++A K+ E ++ G P+ T+ T + C G KA+++ +
Sbjct: 498 CTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLR- 556
Query: 333 SVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+M+ K P T +L+ G +++ + +I+ + K PN
Sbjct: 557 -IMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A + E GV TV+Y +L+ L + G +EA L +ME +G DV +Y+V I
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV-IV 294
Query: 247 NTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ Y + ++ +L++E++ GLKP+ +YN +++ CK + EA++V ++
Sbjct: 295 DGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ + T I SGN YK+F E +PDF T ++ GL + K+ EA+
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 135/274 (49%), Gaps = 8/274 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN---LS 165
+AG+ A + FD++ G SV S N LF S +D + F + ++Y+ +
Sbjct: 193 EAGLLLEAGKLFDKLLNYGVLVSVDSCN--LFLARLSNSFDGIRTAF-RVFREYSEVGVC 249
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
+ +SY ++L C G +A LL +ME +G V+Y+ +++ + + +L
Sbjct: 250 WNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKL 309
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
E+++KG+ + YN I+ G ++++ M++ + PD + Y L++ + K
Sbjct: 310 MEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGK 369
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ + K+++ ++ P+ T+ + I+ LC +G +A K+F E + PD T
Sbjct: 370 SGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVT 429
Query: 345 VKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
L++G K ++KEA + + ++K PNV+
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVV 463
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 37/268 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G D A +M E G +V ++NAL+ + ++ L +E+
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLA- 526
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I+Y ++ ++C G KA ELL M +KG++ T VT+ ++N G E+
Sbjct: 527 GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDG 586
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTC 281
ERL M KG+ + +N + + R E+ M G+ PDT +YN L+
Sbjct: 587 ERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKG 646
Query: 282 YCKNEMM-----------------------------------DEAKKVYEGLEENGCSPN 306
+CK M +EA+K++E + +G
Sbjct: 647 HCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAE 706
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ ++ GN++ ++ E++
Sbjct: 707 KEIYDIFVDVNYEEGNWENTLELCDEAI 734
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + D A + F QM E G +++++N LL R+ L D+ L DE+ ++
Sbjct: 202 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM-RER 260
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PDK SY L+ C +G D AL++ + N V Y+T++ L K G +EA
Sbjct: 261 GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEA 320
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
+L+ +M + + DV + + GD RL+E +++ M D P+ I+Y+ L+
Sbjct: 321 CKLFEKMRENSCEPDVVTFTALMDGLCKGD--RLQEAQQVLETMEDRNCTPNVITYSSLI 378
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + +A++V++ + G PN T+ + I+ C + D A + +E +
Sbjct: 379 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 438
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
PD T L++GL K + EA + +K KF P+V+
Sbjct: 439 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 176/395 (44%), Gaps = 39/395 (9%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DPD AL + SK + Y + L +++R + ++++ P IT +
Sbjct: 3 DPDAALRFFHWASKQQGFD-HNVYTYNRLFEALLRARRIDETCHILKNGW-PPGITPNVF 60
Query: 100 -LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV------- 151
+I+ ++G D A ++M E G +N ++ A ++R K
Sbjct: 61 TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM 120
Query: 152 ---------PILFDEIPKKYNLS---------------PDKISYGLLLKSHCDSGSSDKA 187
I+ D + K L P++ +Y +L+ C +A
Sbjct: 121 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LL EM+ G+ VTY+TV++ +Q + A +L+ +M + G ++ YN ++
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + EL+DEMR+ GL+PD SY+ LM CK +D A KV+E C P+
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 300
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ T I LC +G D+A K+F++ PD T L++GL K +++EA+ V+
Sbjct: 301 VVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLE 360
Query: 367 TIK-KKFPPNVLRAWKKVEEELGLVPAPAVGDGQK 400
T++ + PNV+ ++ GL V D Q+
Sbjct: 361 TMEDRNCTPNVITYSSLID---GLCKTGQVRDAQE 392
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 153/340 (45%), Gaps = 9/340 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A ++ + + P +++ D + L K+ + + E + N
Sbjct: 248 DEAYELLDEMRERGLQP--DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 305
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI +AG D A + F++M E V++F AL+ C RL + +L E +
Sbjct: 306 TLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL--ETME 363
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N +P+ I+Y L+ C +G A E+ M +G+E VTY ++++ +
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 423
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
A L EM G D+ YN I G PE L +M+ PD I+Y+ L
Sbjct: 424 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA-NRLFGDMKAKFCNPDVITYSCL 482
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK E +D A+ +++ + + P+ TF T + C +G D A ++ +E V
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
PD T LV+G K ++ EA+ V+ R K+ PNV+
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 582
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 138/300 (46%), Gaps = 2/300 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K R + + ++E+ ++ +LI + G A F +M G +
Sbjct: 346 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 405
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++N+L+ + D +L +E+ L PD I+Y L+ C +G + +A L
Sbjct: 406 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL-PDIITYNTLIDGLCKTGRAPEANRLF 464
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
+M+ K +TY+ ++ K + A L+ +M K+ V DV ++ +
Sbjct: 465 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNA 524
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G + + L++EM + PD +Y L+ +CK M EA++V + + + GC PN T+
Sbjct: 525 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 584
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I C +G AY++ +E V P+ T + L+ G ++EA+ ++ +++
Sbjct: 585 TALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLER 644
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y C LI + + D A FD M + V++F+ L+ + L D L +E+
Sbjct: 479 YSC-LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ SPD +Y L+ C G +A +L M +G + VTYT +++ + G
Sbjct: 538 VAS-DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEM-RDAGLKPDTISYN 276
A RL EM GV +V Y I G GD E +++++ + RD K D +Y
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYR 656
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+M C+ M A ++ E ++++G P + I LC KA +V +E +
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716
Query: 337 HKI-PDFNTVKLLVEGLVKKKKIKEAKGV 364
K P+ + +++ L ++ + +EA +
Sbjct: 717 RKSRPNAEAYEAVIQELAREGRHEEANAL 745
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 45/319 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG + A D M LG P +V+++NAL+ +S ++ +E+
Sbjct: 608 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS- 666
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I+YG L+ + C + +D AL+L++E+++ G + TVTY +++ L+K G E+A
Sbjct: 667 GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQA 726
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN------------------------------TYG-- 250
+ EM KG DV YN I + TY
Sbjct: 727 ITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVL 786
Query: 251 -------GDPERLKELIDEM--RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
G + +ELI EM + + P+ I+YN + CK MM EA ++ L +
Sbjct: 787 INGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDG 846
Query: 302 G--CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
SP+ TF T I LC G D+A VF + + +P+ T +L+ GL K K++
Sbjct: 847 SLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906
Query: 360 EAKGVIRT-IKKKFPPNVL 377
A +I + + K P+V+
Sbjct: 907 RAHAMIESMVDKGVTPDVI 925
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 161/333 (48%), Gaps = 16/333 (4%)
Query: 43 KALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQE 97
+AL+I+ +++ +P Y + + L KS E L+E + +T
Sbjct: 198 RALEIFRGEMARDGVAPTIVTY--NTIINGLCKSNELGAGMELFEELVERGHHPDVVTYN 255
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
LI S +AG + A R M +V++++ L+ + D+ L E
Sbjct: 256 ----TLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQE 311
Query: 158 IPKK-YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLY 214
+ +K ++ P+ I+Y L C + +A EL+ + + + V+ TVT++T+++ L
Sbjct: 312 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 371
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTI 273
K G +EA ++ +M G +V YN + D ER +I+ M D G+ PD I
Sbjct: 372 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 431
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y+ L+ +CK +DEA ++ G+ GC+PN TF + I LC S +A+++F +
Sbjct: 432 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM 491
Query: 334 VMVHK-IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ H +PD T L++GL + + +A+ ++
Sbjct: 492 ALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL + S + P + Y ++ V L KS + T++E
Sbjct: 689 DDALQLVSELKSFGWDPDTVTY--NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYN 746
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDE----LGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
LI S +AG + A R M P +V++++ L+ C R+ + ++ +
Sbjct: 747 TLIDSLCKAGDLEEARRLHGDMSSRVSRCCVP-NVVTYSVLINGLCKVGRIDEARELIQE 805
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLY 214
+ K ++ P+ I+Y L C +A EL+ + + + V+ TVT++T+++ L
Sbjct: 806 MMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 865
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTI 273
K G +EA ++ +M G +V YNV + D ER +I+ M D G+ PD I
Sbjct: 866 KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y+ L+ +CK +DEA ++ G+ GC+PN TF + I LC S +A+++F +
Sbjct: 926 TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985
Query: 334 VMVHKI-PDFNTVKLLVEGLVKKKKIKEAK 362
+ H + PD T L++GL + +A+
Sbjct: 986 TLKHGLAPDKITYCTLIDGLFRTGWAGQAE 1015
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 33/342 (9%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K+ + +IES + L+ ++ +A D A+ M G
Sbjct: 402 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 461
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+V++FN+++ +S + +FD++ K+ L PDKI+Y L+ +G + +A
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521
Query: 189 ELLNEME---------------------------NKGVEVTTV----TYTTVLNCLYKQG 217
LL+ M N+ +E+ V T+ ++ K G
Sbjct: 522 ALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAG 581
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYN 276
N E+A L+ EM K + DV + I G E ++++D M + G+ P+ ++YN
Sbjct: 582 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 641
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK+ ++EA + E + +GC P++ T+ + +Y LC + D A ++ E
Sbjct: 642 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 701
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
PD T +LV+GL K + ++A V+ + K P+V+
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 6/252 (2%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V +N +L + R+ + +F + ++P ++Y ++ C S +EL
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
E+ +G VTY T+++ L K G+ EEA RL +M + +V Y+V I
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 251 GDPERLKELIDEM--RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG--CSPN 306
G + +ELI EM + + P+ I+YN + CK M EA ++ L + SP+
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 359
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF T I LC G D+A VF + + +P+ T LV GL K K++ A +I
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419
Query: 367 T-IKKKFPPNVL 377
+ + K P+V+
Sbjct: 420 SMVDKGVTPDVI 431
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 130/259 (50%), Gaps = 10/259 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A FD M G +V+++N L+ ++ ++ + + + K
Sbjct: 860 LIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDK- 918
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++PD I+Y +L+ + C + D+ALELL+ M ++G VT+ ++++ L K + EA
Sbjct: 919 GVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEA 978
Query: 223 ERLWSEME-KKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ +M K G+ D Y I + G + + L+D M D PDT ++N +
Sbjct: 979 FQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCIN 1034
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K + D ++ ++ LE P+ TF I C +GNF++A +F+E V + P
Sbjct: 1035 GLSK--LGDVSRALHRMLELE-LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 1091
Query: 341 DFNTVKLLVEGLVKKKKIK 359
D T L++GL K +++
Sbjct: 1092 DVMTFGALIDGLCKAGQVE 1110
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER-LWSEMEKKGVDLDVA 239
SGS KA++L TY+T+L YK G + ER L + VA
Sbjct: 124 SGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG--DVERTLGFFRRIRSSSRSVA 181
Query: 240 AYNVRITN-TYGGDPERLKELI-DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN+ + + G+ R E+ EM G+ P ++YN ++ CK+ + +++E
Sbjct: 182 DYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEE 241
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L E G P+ T+ T I LC +G+ ++A ++ + +P+ T +L+ GL K +
Sbjct: 242 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGR 301
Query: 358 IKEAKGVIRTIKKK---FPPNVL 377
I EA+ +I+ + +K PN++
Sbjct: 302 IDEARELIQEMTRKSCDVLPNII 324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 45/290 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A +++ + P Y ++ + L K+ + +IES +
Sbjct: 871 DEACNVFDDMIAGGYVPNVVTY--NVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS 928
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ ++ +A D A+ M G +V++FN+++ +S + +FD++ K
Sbjct: 929 VLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLK 988
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ L+PDKI+Y T+++ L++ G A +
Sbjct: 989 HGLAPDKITY-----------------------------------CTLIDGLFRTGWAGQ 1013
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE L M D D A+N I + GD R + M + L PD +++N L+
Sbjct: 1014 AEVLLDAMP----DPDTYAFNCCINGLSKLGDVSR---ALHRMLELELVPDKVTFNILIA 1066
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
CK ++A ++E + P+ TF I LC +G + + +
Sbjct: 1067 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 147/332 (44%), Gaps = 39/332 (11%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V L R SD T++E + I E ++ + G A R FD+M G
Sbjct: 335 VVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKG 394
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+++ L+ C L + +L + + ++ L D+++Y +L+ +C G +
Sbjct: 395 LATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR--LDVDEVTYTVLVDGYCKRGKMAE 452
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A ++ N M +GV VTYT + + L KQG+ + A L EM KG++L+ YN I
Sbjct: 453 AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 512
Query: 247 N---------------------------TY---------GGDPERLKELIDEMRDAGLKP 270
TY G+ +R +L+ EM D G+KP
Sbjct: 513 GLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKP 572
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
++YN LM +C + ++ KK+ E + E PNATT+ + + C N +++
Sbjct: 573 TIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIY 632
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
K + P+ NT +L++G K + +KEA+
Sbjct: 633 KGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 167/384 (43%), Gaps = 49/384 (12%)
Query: 30 KAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHK 89
+A + + S D+A++++ + P + + ++ ++ L + R D L +
Sbjct: 236 EACNAVLSRLPLDEAIELFQGL------PDKNVCSYNILLKVLCGAGRVEDARQLFDEMA 289
Query: 90 NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLY 148
+ P + L I Y G ++A++ D M G P + + + + C + R+
Sbjct: 290 SPPDVVTYGIL---IHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVS 346
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D + ++ D + K L D+ Y +L C+ G A +EM+ KG+ VTYTT
Sbjct: 347 DALTVVEDMVHHKVIL--DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTT 404
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV---------------RITNTY---- 249
++N L + G +EAE++ EM + +D+D Y V ++ NT
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464
Query: 250 -----------------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
GD + EL+ EM + GL+ + +YN L+ CK +D+A
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ ++ G P+ T+ T I LC SG D+A+ + +E + P T +L+ G
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584
Query: 353 VKKKKIKEAKGVIR-TIKKKFPPN 375
+++ K ++ ++K PN
Sbjct: 585 CMSGRVEGGKKLLEWMLEKNIHPN 608
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 14/280 (5%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVP 152
I+ P CN + S D A+ F + + ++V S+N LL C R+ D
Sbjct: 231 ISPSPEACNAVLSRLP---LDEAIELFQGLPD----KNVCSYNILLKVLCGAGRVEDARQ 283
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LFDE+ PD ++YG+L+ +C G + A++LL++M +GVE YT+V+
Sbjct: 284 -LFDEMAS----PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVAL 338
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPD 271
L +G +A + +M V LD A Y ++ GD + DEM+ GL D
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 398
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++Y L+ C+ + EA+KV + + + T+ + C G +A++V
Sbjct: 399 GVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V P+ T L +GL K+ ++ A ++ + K
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 2/214 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +AG D AMRT MD G V ++ L+ A +S D+ L E+
Sbjct: 509 SLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDN 568
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P ++Y +L+ C SG + +LL M K + TY +++ N +
Sbjct: 569 -GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKS 627
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLMT 280
++ M + V+ + YN+ I + + +EM + G + SY+ L+
Sbjct: 628 TTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIR 687
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
K + EA+K++ + + G + + +I
Sbjct: 688 LLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 35/201 (17%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL------- 154
LI + ++G D A +M + G +++++N L+ C R+ +L
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 155 -------FDEIPKKY-------------------NLSPDKISYGLLLKSHCDSGSSDKAL 188
++ + K+Y N+ P++ +Y +L+K HC + S +A
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
NEM KG +T +Y+ ++ L K+ EA +L+ +M K+G + YN I
Sbjct: 665 YFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFN 724
Query: 249 YGGDP-ERLKELIDEMRDAGL 268
+ D E L DE+ +A +
Sbjct: 725 FNEDNLEATLALCDELVEASI 745
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 168/346 (48%), Gaps = 12/346 (3%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDI 81
+ I+ SK + LR+E D KA I+ S S Y++ + + + +L + F
Sbjct: 10 SKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPA 69
Query: 82 ETLIESHKNDP-KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG---TPRSVISFNA 137
E ++ K + +IT+E +L ++ R YG+ M A+R F +M++ G T +S IS A
Sbjct: 70 EEMLNRMKEEKCRITEEIFL-SICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFA 128
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC-DSGSSDKALELLNEMEN 196
+L ++L KV + F + ++ + +S +L+K+ C +SG+ D A E+ EM
Sbjct: 129 ILVE--ENQL--KVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPK 184
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPER 255
+G + + TY T++N L K G EA+ L+ EM+ KG V Y+ + G+ +
Sbjct: 185 RGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDE 244
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L D+M+ ++P+ +Y+ LM CKN EA ++ E + PN T+ T I
Sbjct: 245 AMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLIN 304
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
LC G +A + + PD ++ G +K +EA
Sbjct: 305 GLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEA 350
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 145/308 (47%), Gaps = 16/308 (5%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEP---YLCNLIRSYGQAGMFDHAMRTFDQM 123
L V A K I+ E + PK +P LI + G A F +M
Sbjct: 158 LNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEM 217
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
D G SV++++ L+ ++ D+ LFD++ KK + P+ +Y L+ C +G
Sbjct: 218 DTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK-AIEPNVFTYSSLMDGLCKNGG 276
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
S +A+ELL M K + VTY+T++N L K+G EA M+ +G+ D Y
Sbjct: 277 SLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYG- 335
Query: 244 RITNTYGGDPERLKE---LIDEMRDAGLKPDTISY-------NFLMTCYCKNEMMDEAKK 293
+I N + + + +E +DEM + P+ +++ N ++ C N ++ + +
Sbjct: 336 KIINGFC-NIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQ 394
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+Y G+ G S +A TF + + C G+ KA ++F E V+ +PD +V G
Sbjct: 395 LYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFW 454
Query: 354 KKKKIKEA 361
++K++EA
Sbjct: 455 DRRKVREA 462
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ + ++M + G + T +Y +V L ++ + A + M + GV V + NV I
Sbjct: 104 AIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIK 163
Query: 247 NTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G + E+ EM G PD+ +Y L+ CK EAK++++ ++ GCS
Sbjct: 164 ALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCS 223
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ ++ LC +GN D+A +F + P+ T L++GL K EA +
Sbjct: 224 PSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMEL 283
Query: 365 IR-TIKKKFPPNVL 377
+ ++K+ PN++
Sbjct: 284 LEMMVRKRHKPNMV 297
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L++ G+ HA++ ++M E G + ++N ++ C + D ++ D I K
Sbjct: 366 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 425
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y PD ++ L+ +C D AL+L+ M G+ T+TY +VLN L K G
Sbjct: 426 GY--LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 483
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E + EM KG + YN+ I N E ++I +M GL PD +S+N L+
Sbjct: 484 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 543
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+N ++ A +++ LEE G S A TF T I G N A K+F E +
Sbjct: 544 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 603
Query: 340 PDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNV 376
D T ++L++G K + A ++ IKK F P++
Sbjct: 604 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 641
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++Y L++ C +A+ L M N+G TY T+++ K +EA L
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ KG D Y I GD ER EL +E + G+KPD + YN L+ C
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++ A +V + E GC P+ T+ I LC GN A V +++M +PD T
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433
Query: 345 VKLLVEGLVKKKKIKEAKGVI 365
L++G K+ K+ A ++
Sbjct: 434 FNTLIDGYCKRLKLDSALQLV 454
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 10/223 (4%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E K + PD + Y L+K C G AL+++NEM +G TY V+N L
Sbjct: 348 LFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 406
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGL 268
K GN +A + ++ KG DV +N I G +RLK +L++ M + G+
Sbjct: 407 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLID----GYCKRLKLDSALQLVERMWEYGI 462
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PDTI+YN ++ CK ++E + ++ + GC PN T+ I + C S ++A K
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + PD + L+ G + ++ A + + +++K
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 44/304 (14%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T P IR+Y +AG A+ F++MD P + ++NA++ A + +D+ +
Sbjct: 49 TIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKV 108
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ + +SPD ++ + L+S C + AL LL + ++G V Y TV+ LY
Sbjct: 109 YVRMLAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLY 163
Query: 215 KQGNAEEAERLWSEME-----------------------------------KKGVDLDVA 239
G+ +A +L+ +M ++G+ +++
Sbjct: 164 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 223
Query: 240 AYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN+ I G PE ++ L+D MR A PD ++YN L+ CK M EA
Sbjct: 224 TYNIWIRGLCEAGRLPEAVR-LVDGMR-AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRR 281
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ GC P+ T+ T I C +A ++ K++V +PD T L+ GL +
Sbjct: 282 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 341
Query: 358 IKEA 361
++ A
Sbjct: 342 VERA 345
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A++ ++M E G I++N++L ++ ++V F E+ K
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK- 495
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ I+Y +L+++ C S ++A +++ +M +G+ V++ T++ + G+ E A
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTC 281
L+ ++E+KG +N I G + E + DEM G + D+ +Y L+
Sbjct: 556 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +D A + + G P+ +TF I L + ++VF+ ++H +
Sbjct: 616 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN------HRVFQAVGIIHIMVK 669
Query: 342 FNTVKLLVEGLVK--KKKIKEAKGVIRTIKKK 371
V +V+ ++ KK+I K ++ + KK
Sbjct: 670 IGVVPEVVDTILNADKKEIAAPKILVEDLMKK 701
>gi|242067098|ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 185/406 (45%), Gaps = 22/406 (5%)
Query: 1 MTSLRH--IRRLCTATTAAGSSTTASSISVSKAKSKLR-SEFDPDKALDIYSSVSKHYAS 57
+ S RH +R L T T A T + +S+ KS +R + PD ++ S H A
Sbjct: 14 LLSRRHLLVRLLSTQTQLATPPTPTTPADLSRLKSSIRDAATSPDALATLFLSGLPHPAF 73
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFD 114
++ R L+V RLA + R + +++ S P E +L LI Y AGM D
Sbjct: 74 -LADRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPH-PSEGFLLRLISLYSAAGMPD 131
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
H++ F L P S + +ALL +RLYD+ F+ +P + + P +S+ +L
Sbjct: 132 HSLTVF----RLVNPPSDRALSALLSTYHDNRLYDRAVRAFNTLPAELGIKPGLVSHNVL 187
Query: 175 LKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LK+ SG A ++M + GV+ V+ +L G+ ++L E+
Sbjct: 188 LKALVASGDIAAARSAFDKMPDTAGVQPDIVSCNEILKGYLSTGDDAAFDQLVKEIAGPN 247
Query: 234 VDL--DVAAYNVRITNTYGGDPE-RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
L +V YN+R+ + +EL+D M G+ P+ S+N ++ C +
Sbjct: 248 RRLKPNVGTYNLRMAMLCSKERSFEAEELLDAMGANGVPPNRASFNTVIKGLCNEGEVGA 307
Query: 291 AKKVYEGLEE------NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
A +++ + E G SPN T+ + L FD A +V KE + P F
Sbjct: 308 AMALFKRMPEVPRQKGKGVSPNFETYIMLLEALVNKNLFDPALEVCKECLHNKWAPPFQA 367
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLV 390
VK LVE L+K +K K A+ V+ ++K + + W KVE + ++
Sbjct: 368 VKGLVESLLKSRKAKHAREVLMAMRKAVKGDAKQEWTKVEAQFPML 413
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L++ G+ HA++ ++M E G + ++N ++ C + D ++ D I K
Sbjct: 365 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 424
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y PD ++ L+ +C D AL+L+ M G+ T+TY +VLN L K G
Sbjct: 425 GY--LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 482
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E + EM KG + YN+ I N E ++I +M GL PD +S+N L+
Sbjct: 483 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 542
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+N ++ A +++ LEE G S A TF T I G N A K+F E +
Sbjct: 543 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 602
Query: 340 PDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNV 376
D T ++L++G K + A ++ IKK F P++
Sbjct: 603 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 640
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++Y L++ C +A+ L M N+G TY T+++ K +EA L
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ KG D Y I GD ER EL +E + G+KPD + YN L+ C
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++ A +V + E GC P+ T+ I LC GN A V +++M +PD T
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432
Query: 345 VKLLVEGLVKKKKIKEAKGVI 365
L++G K+ K+ A ++
Sbjct: 433 FNTLIDGYCKRLKLDSALQLV 453
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 10/223 (4%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E K + PD + Y L+K C G AL+++NEM +G TY V+N L
Sbjct: 347 LFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 405
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGL 268
K GN +A + ++ KG DV +N I G +RLK +L++ M + G+
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLID----GYCKRLKLDSALQLVERMWEYGI 461
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PDTI+YN ++ CK ++E + ++ + GC PN T+ I + C S ++A K
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + PD + L+ G + ++ A + + +++K
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 133/304 (43%), Gaps = 44/304 (14%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T P IR+Y +AG A+ F++MD P + ++NA++ A + +D+ +
Sbjct: 48 TIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKV 107
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ + +SPD ++ + L+S C + AL LL + ++G V Y TV+ LY
Sbjct: 108 YVRMLAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLY 162
Query: 215 KQGNAEEAERLWSEME-----------------------------------KKGVDLDVA 239
G+ +A +L+ +M ++G+ +++
Sbjct: 163 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 222
Query: 240 AYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN+ I G PE ++ L+D MR A PD ++YN L+ CK M EA
Sbjct: 223 TYNIWIRGLCEAGRLPEAVR-LVDGMR-AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRR 280
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ GC P+ T+ T I C +A ++ K++V +PD T L+ GL +
Sbjct: 281 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 340
Query: 358 IKEA 361
++ A
Sbjct: 341 VERA 344
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 130/272 (47%), Gaps = 10/272 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A++ ++M E G I++N++L ++ ++V F E+ K
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK- 494
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ I+Y +L+++ C S ++A +++ +M +G+ V++ T++ + G+ E A
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTC 281
L+ ++E+KG +N I G + E + DEM G + D+ +Y L+
Sbjct: 555 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +D A + + G P+ +TF I L + ++VF+ ++H +
Sbjct: 615 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN------HRVFQAVGIIHIMVK 668
Query: 342 FNTVKLLVEGLVK--KKKIKEAKGVIRTIKKK 371
V +V+ ++ KK+I K ++ + KK
Sbjct: 669 IGVVPEVVDTILNADKKEIAAPKILVEDLMKK 700
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 141/278 (50%), Gaps = 14/278 (5%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y C LI + +AG + FD+M++ G +V++ N L+ R+ F E
Sbjct: 422 YNC-LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEA 480
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
++ + D ++Y L+ + C+ + +KA+EL NEM G + Y T+++ + G
Sbjct: 481 QRR-GMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGR 539
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRI-----TNTYGGDPERLKELIDEMRDAGLKPDTI 273
+A + +E++K G+ D YN I TN + R+ E++ EM +AGLKPDTI
Sbjct: 540 MADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF----HRVFEMLKEMEEAGLKPDTI 595
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN L+ KN + A+KV + + G P T+ I C +GN ++A ++FK+
Sbjct: 596 TYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDM 655
Query: 334 VMVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIK 369
K+P NTV +L+ L K K+K A ++ +K
Sbjct: 656 KAASKVPP-NTVIYNILINSLCKNNKVKSAVSLMEDMK 692
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 13/330 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
+K +++ ++K +P + + V + ++ R S + +E+ + K Y
Sbjct: 436 EKGKELFDEMNKEGVAP--NVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYT 493
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI ++ F+ AM F++M + G +P +++ + + R+ D +L +
Sbjct: 494 A-LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAE--L 550
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
KK + PD + Y L+ C + + E+L EME G++ T+TY T++ K G+
Sbjct: 551 KKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDL 610
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAG-LKPDTISYN 276
+ A+++ +M K GV VA Y + N Y G+ E+ +M+ A + P+T+ YN
Sbjct: 611 KFAQKVMRKMIKAGVVPTVATYGA-VINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYN 669
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CKN + A + E ++ G +PN TT+ L + +K ++ F + ++
Sbjct: 670 ILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFE-FMDRMIE 728
Query: 337 HKI-PDFNTVKLLVEGLVKKKKIKEAKGVI 365
H PD+ T+++L E L +I+ K +
Sbjct: 729 HACNPDYITMEILTEWLSAVGEIERLKKFV 758
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 143/316 (45%), Gaps = 31/316 (9%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMF-------------------DHAMRTFDQMD 124
L++ +N+ ++ E + NL+ +G+ G+ + F +M
Sbjct: 239 LLKRERNE-ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMI 297
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+LG + N+LL R ++++ L +++ + ++ P+ +++G+L+ C
Sbjct: 298 KLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVE-MDIQPNVVTFGILINHMCKFRRV 356
Query: 185 DKALELLNEM----ENKGVEVTT----VTYTTVLNCLYKQGNAEEAERLWSEME-KKGVD 235
D ALE+L +M E+ G+ V+ V Y T+++ L K G +E L M +KG
Sbjct: 357 DDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCA 416
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D YN I G+ E+ KEL DEM G+ P+ ++ N L+ C+ + A
Sbjct: 417 PDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + G +A T+ I C NF+KA ++F E + PD L+ G +
Sbjct: 477 FVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQ 536
Query: 355 KKKIKEAKGVIRTIKK 370
++ +A V+ +KK
Sbjct: 537 AGRMADASFVLAELKK 552
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 4/226 (1%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L + + + +PD I+Y L+ C +G +K EL +EM +GV VT T++ +
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPD 271
+ G A + E +++G+ D Y I N + + E+ EL +EM +G PD
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI-NAFCNVNNFEKAMELFNEMLKSGCSPD 523
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
I Y L++ + + M +A V L++ G P+ + T I C + F + +++ K
Sbjct: 524 AIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLK 583
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
E PD T L+ K +K A+ V+R IK P V
Sbjct: 584 EMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTV 629
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 138/297 (46%), Gaps = 26/297 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
L+R+ G++ + + ++ F+ +D + ++ N L RS R+ D + ++ DE+ +
Sbjct: 163 LLRASGRSELVEESLILFNDLDP--SVKNTYLRNVWLSILLRSGRVKDALKVI-DEMFES 219
Query: 162 ---YNLSPDK----ISYGLLLKSHCDSG--SSDKALELLNEMENKGVEVTTVTYTTVLNC 212
N P+ I + LLK + S D+ + L+ + GV +++ ++
Sbjct: 220 NDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITR 279
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L + L++EM K G L+ AA N +T G+ R+ EL+++M + ++P+
Sbjct: 280 LCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPN 339
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYE----GLEENGCS----PNATTFRTWIYHLCGSGNF 323
+++ L+ CK +D+A +V E G E G S P+ + T I LC G
Sbjct: 340 VVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQ 399
Query: 324 DKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ + E + K PD T L++G K +I++ K + + K+ PNV+
Sbjct: 400 QEGLGLM-ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 21/268 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP-YL 100
+KA+++++ + K SP + Y + +++ R +D ++ K K+ P +
Sbjct: 506 EKAMELFNEMLKSGCSPDAIVYYT--LISGFSQAGRMADASFVLAELK---KLGIRPDTV 560
Query: 101 C--NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDE 157
C LI + + F +M+E G I++N L+ +A L ++
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQ 216
I K + P +YG ++ ++C +G+ ++A+E+ +M+ V TV Y ++N L K
Sbjct: 621 I--KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKN 678
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-----DPERLKELIDEMRDAGLKPD 271
+ A L +M+ GV + YN + G D E++ E +D M + PD
Sbjct: 679 NKVKSAVSLMEDMKIWGVTPNTTTYNA----IFKGLRDEKDLEKVFEFMDRMIEHACNPD 734
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLE 299
I+ L ++ KK G E
Sbjct: 735 YITMEILTEWLSAVGEIERLKKFVAGCE 762
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + D A + F QM E G +++++N LL R+ L D+ L DE+ ++
Sbjct: 83 VIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM-RER 141
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PDK SY L+ C +G D AL++ + N V Y+T++ L K G +EA
Sbjct: 142 GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEA 201
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
+L+ +M + + DV + + GD RL+E +++ M D P+ I+Y+ L+
Sbjct: 202 CKLFEKMRENSCEPDVVTFTALMDGLCKGD--RLQEAQQVLETMEDRNCTPNVITYSSLI 259
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + +A++V++ + G PN T+ + I+ C + D A + +E +
Sbjct: 260 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 319
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
PD T L++GL K + EA + +K KF P+V+
Sbjct: 320 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 358
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 6/274 (2%)
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
++VI++ ++ ++ + F ++ KK + P++ +Y +L+ C +A
Sbjct: 5 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYL 63
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
LL EM+ G+ VTY+TV++ +Q + A +L+ +M + G ++ YN ++
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G + EL+DEMR+ GL+PD SY+ LM CK +D A KV+E C P+
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ T I LC +G D+A K+F++ PD T L++GL K +++EA+ V+ T+
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Query: 369 K-KKFPPNVLRAWKKVEEELGLVPAPAVGDGQKA 401
+ + PNV+ ++ GL V D Q+
Sbjct: 244 EDRNCTPNVITYSSLID---GLCKTGQVRDAQEV 274
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 152/340 (44%), Gaps = 9/340 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A ++ + + P +++ D + L K+ + + E + N
Sbjct: 129 DEAYELLDEMRERGLQP--DKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI + G D A + F++M E V++F AL+ C RL + +L E +
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL--ETME 244
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N +P+ I+Y L+ C +G A E+ M +G+E VTY ++++ +
Sbjct: 245 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVD 304
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
A L EM G D+ YN I G PE L +M+ PD I+Y+ L
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA-NRLFGDMKAKFCNPDVITYSCL 363
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK E +D A+ +++ + + P+ TF T + C +G D A ++ +E V
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
PD T LV+G K ++ EA+ V+ R K+ PNV+
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVV 463
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 2/300 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K R + + ++E+ ++ +LI + G A F +M G +
Sbjct: 227 LCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++N+L+ + D +L +E+ L PD I+Y L+ C +G + +A L
Sbjct: 287 VVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL-PDIITYNTLIDGLCKTGRAPEANRLF 345
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
+M+ K +TY+ ++ K + A L+ +M K+ V DV ++ +
Sbjct: 346 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNA 405
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G + + L++EM + PD +Y L+ +CK M EA++V + + + GC PN T+
Sbjct: 406 GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTY 465
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I C +G AYK+ +E V P+ T + L+ G ++EA+ ++ +++
Sbjct: 466 TALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLER 525
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y C LI + + D A FD M + V++F+ L+ + L D L +E+
Sbjct: 360 YSC-LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 418
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ SPD +Y L+ C G +A +L M +G + VTYT +++ + G
Sbjct: 419 VAS-DCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEM-RDAGLKPDTISYN 276
A +L EM GV +V Y I G GD E +++++ + RD K D +Y
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+M C+ M A ++ E ++++G P + I LC KA +V +E +
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597
Query: 337 HKI-PDFNTVKLLVEGLVKKKKIKEAKGV 364
K P+ + +++ L ++ + +EA +
Sbjct: 598 RKSRPNAEAYEAVIQELAREGRHEEANAL 626
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKE 258
E +T+T +++ L K EA +++M+KKG + YNV I R
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L+ EM+++GL P+ ++Y+ ++ +C+ +D A K++ + ENGC PN T+ T + LC
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+G D+AY++ E PD + L+ GL K KI A V PP+V+
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 152/313 (48%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++ +AG D A R M E G ++++FN+++ ++ + +FDE+ ++
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVRE- 289
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD +SY L+ +C +G S +AL + EM KG+ VT+T++++ + K GN E A
Sbjct: 290 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 223 ERLWSEMEKKGVDLD-----------------------------------VAAYNVRITN 247
L +M ++G+ ++ V YN I N
Sbjct: 350 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALI-N 408
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
Y G + +EL+ EM GLKPD ++Y+ +++ YCKN A ++ + + E G P
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 468
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A T+ + I LCG A+ +FK + + PD T L++G K+ ++ A +
Sbjct: 469 DAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH 528
Query: 366 -RTIKKKFPPNVL 377
+ +K P+V+
Sbjct: 529 DKMVKAGVLPDVV 541
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 129/251 (51%), Gaps = 8/251 (3%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
SV+++NA+L A + + L FD + ++P+ +Y +L+++ C G +AL +
Sbjct: 155 SVLAYNAVLLALSDASL-TSARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
L +M G VTY T++ ++ G + AERL M + G+ ++ +N +
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G E +++ DEM GL PD +SYN L+ YCK EA V+ + + G P+ T
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL--LVEGLVKKKKIKEAKGVIRT 367
F + I+ +C +GN ++A + ++ M + N V L++G KK + +A +R
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQ--MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 368 IKK-KFPPNVL 377
+K+ + P+V+
Sbjct: 391 MKQCRIKPSVV 401
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 4/273 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y +AG A+ F +M + G V++F +L+ ++ ++ L ++ ++
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQM-RER 359
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L +++++ L+ C G D AL + M+ ++ + V Y ++N G +EA
Sbjct: 360 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEA 419
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EME KG+ DV Y+ I + Y D EL +M + G+ PD I+Y+ L+
Sbjct: 420 RELLHEMEAKGLKPDVVTYST-IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 478
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + + +A +++ + + G P+ T+ + I C GN + A + + V +P
Sbjct: 479 VLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP 538
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
D T +L+ GL K + EA+ ++ + + P
Sbjct: 539 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 5/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A R FD M G +V ++N L+ A C R + + IL D + P+ ++Y L
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDM--RGAGCGPNVVTYNTL 231
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ + +G D A L+ M G++ VT+ +++N + K G E+A +++ EM ++G+
Sbjct: 232 VAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGL 291
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D +YN + G + EM G+ PD +++ L+ CK ++ A
Sbjct: 292 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVT 351
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + E G N TF I C G D A + P L+ G
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYC 411
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNVL 377
++ EA+ ++ ++ K P+V+
Sbjct: 412 MVGRMDEARELLHEMEAKGLKPDVV 436
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 152/378 (40%), Gaps = 56/378 (14%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+AL +++ +++ P + + V + K+ TL+ + E
Sbjct: 313 EALSVFAEMTQKGIMPDVVTFTSLIHV--MCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + G D A+ M + SV+ +NAL+ C R+ D+ L E+ K
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRM-DEARELLHEMEAK 429
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD ++Y ++ ++C + + A EL +M KGV +TY++++ L + +
Sbjct: 430 -GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSD 488
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL-- 278
A L+ M K G+ D Y I + G+ E L D+M AG+ PD ++Y+ L
Sbjct: 489 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLIN 548
Query: 279 ---------------------------------MTC---------------YCKNEMMDE 290
M C +C +M+E
Sbjct: 549 GLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 608
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A KVY+ + + + + + + I+ C +GN KA K+ + P+ + L+
Sbjct: 609 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIR 668
Query: 351 GLVKKKKIKEAKGVIRTI 368
GL + + EA VI+ +
Sbjct: 669 GLFENGMVVEADQVIQQL 686
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 187/401 (46%), Gaps = 47/401 (11%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ---DLTVRRLAKSKRFSDIE 82
IS + S LR + DP AL ++ + + P RY DL + +L +S+ F ++E
Sbjct: 7 ISPFRLSSLLRLQNDPKLALQLFQNPN---PDPKPFRYTHLSYDLIITKLGRSRMFHEME 63
Query: 83 TLIESHKNDPKIT-QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
++ + + + + +E CN+I YG+A + D A++TF+ + E R+V S N+LL A
Sbjct: 64 QILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNA 123
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+ + ++K + I K +PD +Y +L+ + C SGS A + +EM K V
Sbjct: 124 LLKCKEFEKFDGILSGIDK--FATPDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCP 181
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEK---------------KG------------- 233
VT+ T+++ L +EA RL +M K KG
Sbjct: 182 NVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFEL 241
Query: 234 --------VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ LD Y+ I + G + + +++EMR+ G KPDT++YN +++ +C
Sbjct: 242 KKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCN 301
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ + A V E + GC P+ ++ I LC G + +A +F++ PD +
Sbjct: 302 EKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGS 361
Query: 345 VKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKKVE 384
++L +GL + + EA ++ + K + P K VE
Sbjct: 362 YRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVE 402
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + F+ A ++M G VIS+N ++ + + + LF+++P++
Sbjct: 295 MISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRR- 353
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD SY +L C+ ++A +L+EM KG + + T + L ++GN E
Sbjct: 354 GCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALCQEGNLELL 413
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT 246
++ + + K V +D A+++ ++
Sbjct: 414 CKVLNSLVKGNV-IDGDAWSLAVS 436
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 170/371 (45%), Gaps = 10/371 (2%)
Query: 5 RHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDI--YSSVSKHYASPVSSR 62
+H R L + + ++T + S S+ + + S+ DP A +I Y+S ++ SS
Sbjct: 44 QHKRELEPSDSHPNANTKSPIGSPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSY 103
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
+ + +L ++K FS I+ L+ K+ +I YG+A + D A++ F
Sbjct: 104 L---ILILKLGRAKYFSFIDDLLTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFYT 160
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+ + S N +L + Y K + Y++ P+ SY +L+++ C +G
Sbjct: 161 ILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNG 220
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
A L N+M + V +Y ++ L ++ A L +M KG D +Y
Sbjct: 221 QISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYT 280
Query: 243 VRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ + ++L+E L+ M+ G PD I YN ++ +C+ +A KV E +E
Sbjct: 281 TLLNSL--CRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDME 338
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
NGC PN ++RT + LC G FD+A +E +M P F L++G KI+
Sbjct: 339 SNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIE 398
Query: 360 EAKGVIRTIKK 370
EA GV+ + K
Sbjct: 399 EACGVVEELLK 409
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 14/301 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L++ + G+ HA++ ++M E G + ++N ++ C + D ++ D I K
Sbjct: 390 SLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVK 449
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y PD ++ L+ +C D AL+L+ M G+ +TY +VLN L K G A+
Sbjct: 450 GY--LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAK 507
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
E + EM KG + YN+ I N E +I M GL PD +S+N L+
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+N +D A +++ L+E G S A TF I N A K+F E +
Sbjct: 568 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 627
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKG-VIRTIKKKFPP---------NVLRAWKKVEEELGL 389
PD T ++LV+GL K + A + I K F P N+L +V E + +
Sbjct: 628 PDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAI 687
Query: 390 V 390
+
Sbjct: 688 I 688
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 146/330 (44%), Gaps = 39/330 (11%)
Query: 69 VRRLAKSKRFSDIETLIESHKND--PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+R L + R D++ + S ++ P Q Y+ + I++Y +AG A+ F++MD
Sbjct: 42 IRELVSAGRLDDVDAALASARSHLAPDSLQPLYVAS-IQAYARAGRLRAAVDAFERMDLF 100
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
P + ++NA++ A + +D+ ++ + ++PD ++ + LKS C +G
Sbjct: 101 ACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA-GVAPDARTHTVRLKSFCLTGRPHV 159
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY-NVRI 245
AL LL + +G + Y TV+ LY G+ A L+ EM + V DVA + NV
Sbjct: 160 ALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLH 219
Query: 246 TNTYGGD--------------------------------PERLKELID--EMRDAGLKPD 271
GD RL+E + E A + PD
Sbjct: 220 ALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPD 279
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN LM CK+ + EA + + GC P+ T+ T I C SG +A ++ K
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
++V +PD T L+ GL + I+ A
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERA 369
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 2/216 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
++PD ++Y L++ C +A + L M N+G TY T+++ K G +EA
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L + KG D Y I GD ER EL +E + LKPD + YN L+
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ ++ A +V + E GC P+ T+ I LC GN A V ++++ +PD
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 343 NTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L++G K+ K+ A ++ R P+V+
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVI 491
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 123/270 (45%), Gaps = 16/270 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A++ ++M G VI++N++L ++ +V F+E+ K
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK- 519
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ I+Y +L+++ C ++A ++ M G+ V++ T+++ + G+ + A
Sbjct: 520 GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ ++++KG +N+ I Y + + +++ EM G KPD +Y L+
Sbjct: 580 YLLFQKLDEKGYSATADTFNILI-GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVD 638
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D A + G P+ TF + L + +A + V + +P
Sbjct: 639 GLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
Query: 341 D-FNTV-----------KLLVEGLVKKKKI 358
+ +T+ K+LVE L+KK I
Sbjct: 699 EVVDTILSTDKKEIAAPKILVEELMKKGHI 728
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ + K + + +I D + LI + + G D A F ++DE
Sbjct: 529 NILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDE 588
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G + +FN L+ A + +F E+ K PD +Y +L+ C + + D
Sbjct: 589 KGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYKPDLYTYRILVDGLCKAANVD 647
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+A L EM +KG + T+ +LN L EA + M + GV
Sbjct: 648 RAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGV 696
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 7/324 (2%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
SP S Y + + LAK+ + +D L + + +LI A FD A
Sbjct: 7 SPDSWSYG--ILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 117 MRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
F M+ G P S +++N ++ A C R L + ++ I + PD ++Y ++
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH--VPDVVTYNTVM 122
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C SG ++AL L NEME G ++ T++ L +Q ++A +++ EME + +
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D +Y + I G +L M D+G+ P ++YN ++ C +DEA ++
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + GC P+ TF I C G D+A+++ K +PD T L+ GL
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 355 KKKIKEAKGVIR-TIKKKFPPNVL 377
++ +A+ ++ +K++ P V+
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVV 326
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 158/376 (42%), Gaps = 29/376 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A ++ + P S Y + + LAK+ + ++ L D IT
Sbjct: 167 DQACQVFHEMEARDIPPDSWSYG--ILIDGLAKAGKLNEAYKLFR-RMLDSGITPSAVTY 223
Query: 102 NL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N+ I A D A+ F M G S +FN L+ A C R ++ D+ L +
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM-DEAFRLLKRMT 282
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ PD ++Y L+ C D A LL +M + + T VT T+++ L K G
Sbjct: 283 DDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA + M G DV YN + + G ER +EL+ +M GL P+ ++Y L
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ CK + EA V+ ++ +GC+PN T+ I C +G D K+F E V
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK------------KFPPNVLRAWKKVEEE 386
PD L L K + A ++R ++ +F + L K+E
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMA 521
Query: 387 LGLV---------PAP 393
LG V PAP
Sbjct: 522 LGFVRDMVRGGQLPAP 537
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+SPD SYG+L+ +G + A +L ++ + GV +TV YT++++ L + ++A
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+++M ++G YNV I + G E +LI +M + G PD ++YN +M
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ ++EA ++ +E GC+PN + T I LC D+A +VF E PD
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ +L++GL K K+ EA + R +
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRM 211
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 178/421 (42%), Gaps = 47/421 (11%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYA--SPVSSRYAQDLTVRRLAKSK 76
S T S+++ + L D A ++++ +++ SPV+ D + +R +
Sbjct: 39 SGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEE 98
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
I+ +IE +T + L +S G + A+ F++M+ LG + S N
Sbjct: 99 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKS----GRVEEALLLFNEMERLGCTPNRRSHN 154
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL----------------KSHCD 180
++ + D+ +F E+ + ++ PD SYG+L+ + D
Sbjct: 155 TIILGLCQQSKIDQACQVFHEMEAR-DIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLD 213
Query: 181 SGSS-------------------DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SG + D+ALEL M +KG + T+ +++ K+G +E
Sbjct: 214 SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDE 273
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL M G DV Y+ I+ + + L+++M KP ++ N L+
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA++V + + +G SP+ T+ T ++ C +G ++A ++ + V P
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELGLVPAPAVGDGQ 399
+ T LV GL K ++ EA GV +K PN+ + LG A V G
Sbjct: 394 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI---LGFCSAGQVDGGL 450
Query: 400 K 400
K
Sbjct: 451 K 451
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 134/241 (55%), Gaps = 6/241 (2%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+T E +L L+R Y +AG+ A+ F++M++ I+F+ L+ R R +
Sbjct: 127 VTVETFLI-LMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQE 185
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
FD + K+ PD I Y L++ C +G+ +A + EM+ G++ TY+ V++ L
Sbjct: 186 FFDSLKDKF--EPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSL 243
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPD 271
+ G A +++EM G + YN +RI + G E++ ++ ++M+ G +PD
Sbjct: 244 CRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRI-HVKAGRTEKVLQVYNQMKRLGCEPD 302
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T++YNFL+ +CK+E +++A KV + + GC+PNA+TF T + G+ + A++++K
Sbjct: 303 TVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYK 362
Query: 332 E 332
+
Sbjct: 363 K 363
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 136/280 (48%), Gaps = 15/280 (5%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+ A + + L + +R S + +S K+ +P + NL+R + +AG A R
Sbjct: 164 KIAFSILISILCRERRASQAQEFFDSLKDKFEPDVI---VYTNLVRGWCRAGNISEAERV 220
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F +M G +V +++ ++ + R + +F E+ P+ I+Y L++ H
Sbjct: 221 FGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDA-GCQPNSITYNSLMRIHV 279
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G ++K L++ N+M+ G E TVTY ++ K N E+A ++ M KKG + +
Sbjct: 280 KAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNAS 339
Query: 240 AYNVRITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+N +G GD + +M++ + +T++YN LM + ++ D K+
Sbjct: 340 TFN----TLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKL 395
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
++EN PN T++ I CG G+++ AYK F+E +
Sbjct: 396 KTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMI 435
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 36/264 (13%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
GQ MFD A D M +V +F L+ R+ L + F+ + + YN PD
Sbjct: 105 GQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRM-EDYNCKPD 163
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
KI++ +L+ C + +A E + +++K E + YT ++ + GN EAER++
Sbjct: 164 KIAFSILISILCRERRASQAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFG 222
Query: 228 EMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
EM + AG+KP+ +Y+ ++ C+
Sbjct: 223 EM----------------------------------KVAGIKPNVYTYSIVIDSLCRCGQ 248
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ A ++ + + GC PN+ T+ + + +G +K +V+ + + PD T
Sbjct: 249 ITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNF 308
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKK 371
L+E K + +++A VI + KK
Sbjct: 309 LIETHCKDENLEDAIKVIGLMAKK 332
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + G F A F M + G ++N+ + C RL + ++ + +
Sbjct: 257 IIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKML--E 314
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ ++Y L+ +C+ G DKA +EM +KG+ + VTY ++ L+ +G +
Sbjct: 315 GGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGD 374
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A+ + EM +KG+ D +N+ I N Y GD +R L+DEM G++P ++Y L+
Sbjct: 375 ADNMIKEMREKGMMPDAVTHNILI-NGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI 433
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K M EA ++ +++ G P+ F I C +GN D+A+++ KE + +
Sbjct: 434 YVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVL 493
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++G ++ K++EA+ ++ +K++
Sbjct: 494 PDEITYNTLMQGYCREGKVEEARQLLDEMKRR 525
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 143/270 (52%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G D A D+M G S++++N + A + E+ +K
Sbjct: 327 LIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK- 385
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +++ +L+ +C G + +A LL+EM KG++ T VTYT+++ L K+ +EA
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+S+++++G+ D+ +N I + G+ +R +L+ EM + + PD I+YN LM
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ ++EA+++ + ++ G P+ ++ T I G+ A++V E + P
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++GL K ++ + A+ +++ + K
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSK 595
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
++S +L + L R D + +I+ + + LI Y + G A
Sbjct: 353 MASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFG 412
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
D+M G +++++ +L++ + + LF +I ++ L PD I + L+ H
Sbjct: 413 LLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQE-GLLPDIIVFNALIDGH 471
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C +G+ D+A +LL EM+N V +TY T++ ++G EEA +L EM+++G+ D
Sbjct: 472 CANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDH 531
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+YN I+ + GD + + DEM G P ++YN L+ CKN+ + A+++ +
Sbjct: 532 ISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKE 591
Query: 298 LEENGCSPNATTFRTWI 314
+ G +P+ +T+ + I
Sbjct: 592 MVSKGITPDDSTYLSII 608
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 41/266 (15%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE------------ 189
CT ++D++ + D + K L D LL++++C+ ++ALE
Sbjct: 125 CTNRTIFDELALARDRVDAKTTLIFD-----LLVRAYCELKKPNEALECFYLIKEKGFVP 179
Query: 190 -----------------------LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
L EM + + T+ ++N L K+G ++A+
Sbjct: 180 NIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFI 239
Query: 227 SEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
ME GV +V YN I + G +R + + M+D GL+PD +YN ++ CK
Sbjct: 240 GHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKE 299
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
++EA + + E G PNA T+ I C G+ DKAY E + + T
Sbjct: 300 GRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTY 359
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK 371
L + L + ++ +A +I+ +++K
Sbjct: 360 NLFIHALFMEGRMGDADNMIKEMREK 385
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R+Y + + A+ F + E G ++ + N +L + +L+ E+ +
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM-FRM 210
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ ++ +++ C G KA E + ME GV+ VTY T+++ +G + A
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ M+ KG++ D YN I+ G E LI +M + GL P+ ++YN L+
Sbjct: 271 RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC +D+A + + G + T+ +I+ L G A + KE +PD
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T +L+ G + K A G++ + K P ++
Sbjct: 391 AVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLV 427
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 139/275 (50%), Gaps = 7/275 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A FD M G +VI++NAL+ ++ ++ + + + K
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK- 245
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT-----VTYTTVLNCLYKQG 217
++PD I+Y +L+ + C + D+ALELL+ M ++G VT+ ++ K G
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYN 276
N E+A L+ EM K + DV + I G E ++++D M + G+ P+ ++YN
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK+ ++EA + E + +GC P++ T+ + +Y LC + D A ++ E
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +LV+GL K K ++A V+ + K
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 460
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 139/282 (49%), Gaps = 8/282 (2%)
Query: 103 LIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+++S +AG A+ F +M G +++++N ++ +S LF+E+ ++
Sbjct: 7 VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y L+ S C +G ++A L +M ++G VTY+ ++N L K G +E
Sbjct: 67 GH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDE 125
Query: 222 AERLWSEMEKKGVDL--DVAAYNVRITNTYGGD-PERLKELIDEMRDAGLK--PDTISYN 276
A L EM +K D+ ++ YN + EL+ +RD L+ PDT++++
Sbjct: 126 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 185
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK +DEA V++ + G PN T+ + LC + ++A+ + + V
Sbjct: 186 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 245
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD T +LV+ K ++ EA ++ + + PNVL
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVL 287
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 7/304 (2%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K+ + +IES + L+ ++ +A D A+ M G
Sbjct: 223 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 282
Query: 129 PRSV-----ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+V ++FN L+ ++ +++ LF+E+ K NL PD +++G L+ C +G
Sbjct: 283 TPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQ 341
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+ A ++L+ M N GV VTY +++ L K G EEA + EM G D Y
Sbjct: 342 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401
Query: 244 RI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ + +L+ E++ G PDT++YN L+ K+ ++A V E + G
Sbjct: 402 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKG 461
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P++ TF L SGN ++ + + +PD T +++ + + K+ + K
Sbjct: 462 HQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVK 521
Query: 363 GVIR 366
+I+
Sbjct: 522 AMIK 525
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 11/265 (4%)
Query: 42 DKALDIYSSVSKHYASP---VSSRYAQDLTVRRLAKSKRFSDIETLIESH--KN-DPKIT 95
D+AL++ ++ +P V + ++ + K+ F L E KN P +
Sbjct: 268 DEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 327
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
LI +AG + A D M LG P +V+++NAL+ +S ++
Sbjct: 328 T---FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 384
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+E+ PD I+YG L+ + C + +D AL+L++E+++ G + TVTY +++ L+K
Sbjct: 385 EEMVSS-GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 443
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTIS 274
G E+A + EM KG D + + + G+ EL+ + G+ PD +
Sbjct: 444 SGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLE 299
+ ++ C++ +D+ K + + E
Sbjct: 504 CSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 238 VAAYNVRITN-TYGGDPERLKELI-DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
VA YN+ + + GD R E+ EM G+ P ++YN ++ CK+ + +++
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
E L E G P+ T+ T I LC +G+ ++A ++ + +P+ T +L+ GL K
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 356 KKIKEAKGVIRTIKKK---FPPNVL 377
+I EA+ +I+ + +K PN++
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNII 145
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L++ G+ HA++ ++M E G + ++N ++ C + D ++ D I K
Sbjct: 368 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 427
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y PD ++ L+ +C D AL+L+ M G+ T+TY +VLN L K G
Sbjct: 428 GY--LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 485
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E + EM KG + YN+ I N E ++I +M GL PD +S+N L+
Sbjct: 486 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 545
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+N ++ A +++ LEE G S A TF T I G N A K+F E +
Sbjct: 546 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 605
Query: 340 PDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNV 376
D T ++L++G K + A ++ IKK F P++
Sbjct: 606 ADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSM 643
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++Y L++ C +A+ L M N+G TY T+++ K +EA L
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ KG D Y I GD ER EL +E + G+KPD + YN L+ C
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++ A +V + E GC P+ T+ I LC GN A V +++M +PD T
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435
Query: 345 VKLLVEGLVKKKKIKEA 361
L++G K+ K+ A
Sbjct: 436 FNTLIDGYCKRLKLDSA 452
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 10/223 (4%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E K + PD + Y L+K C G AL+++NEM +G TY V+N L
Sbjct: 350 LFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGL 408
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGL 268
K GN +A + ++ KG DV +N I G +RLK +L++ M + G+
Sbjct: 409 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLID----GYCKRLKLDSALQLVERMWEYGI 464
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PDTI+YN ++ CK ++E + ++ + GC PN T+ I + C S ++A K
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + PD + L+ G + ++ A + + +++K
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 44/304 (14%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T P IR+Y +AG A+ F++MD P + ++NA++ A + +D+ +
Sbjct: 51 TIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKV 110
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ + +SPD ++ + L+S C + AL LL + ++G V Y TV+ LY
Sbjct: 111 YVRMLAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLY 165
Query: 215 KQGNAEEAERLWSEME-----------------------------------KKGVDLDVA 239
G+ +A +L+ +M ++G+ +++
Sbjct: 166 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 225
Query: 240 AYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN+ I G PE ++ L+D MR + PD ++YN L+ CK M EA
Sbjct: 226 TYNIWIRGLCEAGRLPEAVR-LVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRR 283
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ GC P+ T+ T I C +A ++ K++V +PD T L+ GL +
Sbjct: 284 MMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGD 343
Query: 358 IKEA 361
++ A
Sbjct: 344 VERA 347
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 129/272 (47%), Gaps = 10/272 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A++ ++M E G I++N++L ++ ++V F E+ K
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK- 497
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ I+Y +L+++ C S ++A +++ +M +G+ V++ T++ + G+ E A
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTC 281
L+ ++E+KG +N I G + E + DEM G + D+ +Y L+
Sbjct: 558 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +D A + + G P+ +TF I + ++VF+ ++H +
Sbjct: 618 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI------NSLTVNHRVFQAVGIIHIMVK 671
Query: 342 FNTVKLLVEGLVK--KKKIKEAKGVIRTIKKK 371
V +V+ ++ KK+I K ++ + KK
Sbjct: 672 IGVVPEVVDTILNADKKEIAAPKILVEDLMKK 703
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G +A+ D M G V+++ LL A + Y + L DE+ K
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK- 220
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD I+Y +++ C G D A+E L + + G E TV+Y VL L E+A
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L +EM +KG +V +N+ I+ G E E++D++ G P+++SYN ++
Sbjct: 281 EKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHA 340
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---FKESVMVHK 338
+CK + MD A E + GC P+ ++ T + LC G D A ++ K+
Sbjct: 341 FCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 400
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ +NTV ++GL K K KEA ++ + K P+++
Sbjct: 401 LISYNTV---IDGLTKAGKTKEALELLNEMVTKGLQPDII 437
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 29/335 (8%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ S+ H P + Y ++ ++ L ++R+ D E L+ +++Q+ Y
Sbjct: 243 DDAIEFLKSLPSHGCEPNTVSY--NIVLKGLCTAERWEDAEKLMA------EMSQKGYPP 294
Query: 102 N------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
N LI + G+ + AM DQ+ + G + +S+N +L A + + D+ + F
Sbjct: 295 NVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA-MAF 353
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
E+ PD +SY LL + C G D A+ELL+++++KG ++Y TV++ L K
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDT 272
G +EA L +EM KG+ D+ Y+ + D R++E I +++D G++P+T
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRED--RIEEAIRAFCKVQDMGIRPNT 471
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ YN ++ CK A ++ + NGC PN +T+ I L G +A ++ E
Sbjct: 472 VLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGE 531
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ ++ +GL+ K I+ G T
Sbjct: 532 ---------LCSRGVVSKGLINKAAIRLLDGTTHT 557
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 160/350 (45%), Gaps = 14/350 (4%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D ++AL + S+S S A +++L S R ++ ++ + + D
Sbjct: 74 DLEEALRLVESMSGLEPSAAPGPCAA--LIKKLCASGRTAEARRVLAACEPDVMAYNA-- 129
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
++ Y G D A R M P S ++N L+ C R R + + +L D +
Sbjct: 130 ---MVAGYCVTGQLDAARRLVADMPM--EPDSY-TYNTLIRGLCGRGRTGNALVVLDDML 183
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ PD ++Y +LL++ C +A++LL+EM KG +TY V+N + ++G
Sbjct: 184 --RRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
++A + G + + +YN+ + + E ++L+ EM G P+ +++N
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L++ C+ +++ A +V + + + GC+PN+ ++ ++ C D+A + V
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
PD + L+ L + ++ A ++ +K K VL ++ V + L
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 210 LNCLYKQGNAEEAERL---WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA 266
L L ++G+ EEA RL S +E AA ++ + G E + L A
Sbjct: 66 LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCAS-GRTAEARRVL------A 118
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+PD ++YN ++ YC +D A+++ + P++ T+ T I LCG G A
Sbjct: 119 ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNA 175
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + + +PD T +L+E K+ K+A ++ ++ K
Sbjct: 176 LVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 38/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G A+ D+M E+G +I+ N L+ S + +L D++ + Y
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-Y 222
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++YG +L C SG + A+ELL +ME + +++ V Y+ +++ L K G+ + A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN---------------------------TYG----- 250
L++EME KG+ ++ YN+ I T+
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 251 ----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G +EL EM G+ PDTI+Y L+ +CK +D+A ++ + + GC PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF I C + D ++F++ + + D T L++G + K+ AK + +
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 367 -TIKKKFPPNVL 377
+ +K PPN++
Sbjct: 463 EMVSRKVPPNIV 474
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 136/263 (51%), Gaps = 8/263 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + G D+A F++M+ G ++I++N L+ C R D +L D I +K
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N P+ +++ +L+ S G +A EL EM ++G+ T+TYT++++ K+ + ++
Sbjct: 329 IN--PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFL 278
A ++ M KG D ++ +N+ I N Y R+ EL +M G+ DT++YN L
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILI-NGYC-KANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +C+ ++ AK++++ + PN T++ + LC +G +KA ++F++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
D +++ G+ K+ +A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDA 527
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 168/372 (45%), Gaps = 16/372 (4%)
Query: 8 RRLCTATTAAGS----STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRY 63
R+LC A +A G ++I+ S + L E +AL++ + + P
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP--DLI 194
Query: 64 AQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+ V L S + ++ I+ ++E +T P L N++ GQ + AM
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL-NVMCKSGQTAL---AMEL 250
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
+M+E + ++ ++ + D LF+E+ K ++ + I+Y +L+ C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFC 309
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
++G D +LL +M + + VT++ +++ K+G EAE L EM +G+ D
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 240 AYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
Y I + ++ +++D M G P+ ++N L+ YCK +D+ +++ +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G + T+ T I C G + A ++F+E V P+ T K+L++GL +
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 359 KEAKGVIRTIKK 370
++A + I+K
Sbjct: 490 EKALEIFEKIEK 501
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 127/253 (50%), Gaps = 4/253 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + + D A + D M G ++ +FN L+ C +R+ D + LF ++
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE-LFRKMSL 431
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + D ++Y L++ C+ G + A EL EM ++ V VTY +L+ L G +E
Sbjct: 432 R-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 490
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
+A ++ ++EK ++LD+ YN+ I + +L + G+KP +YN ++
Sbjct: 491 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + EA+ ++ +EE+G +P+ T+ I G G+ K+ K+ +E
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 610
Query: 340 PDFNTVKLLVEGL 352
D +T+K++++ L
Sbjct: 611 VDASTIKMVIDML 623
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S+ + G A +M G I++ +L+ + DK + D + K
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK- 397
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ +L+ +C + D LEL +M +GV TVTY T++ + G A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ EM + V ++ Y + + G+ E+ E+ +++ + ++ D YN ++
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +D+A ++ L G P T+ I LC G +A +F++ PD
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 342 FNTVKLLV 349
T +L+
Sbjct: 578 GWTYNILI 585
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 37/249 (14%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGV-------------------------- 199
P I + L + + D L L +ME KG+
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 200 ---------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
E T+T++T++N L +G EA L M + G D+ N +
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G LID+M + G +P+ ++Y ++ CK+ A ++ +EE +A
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TI 368
+ I LC G+ D A+ +F E M + T +L+ G + + ++R I
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 369 KKKFPPNVL 377
K+K PNV+
Sbjct: 326 KRKINPNVV 334
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 7/324 (2%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
SP S Y + + LAK+ + +D L + + +LI A FD A
Sbjct: 7 SPDSWSYG--ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 117 MRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
F M+ G P S +++N ++ A C R L + ++ I + PD ++Y ++
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH--VPDVVTYNTVM 122
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C S ++AL L NEME G ++ T++ L +Q ++A +++ EME K +
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D +Y + I G +L M D+G+ P ++YN ++ C +DEA ++
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + GC P+ TF I C G D+A+++ K +PD T L+ GL
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 355 KKKIKEAKGVIR-TIKKKFPPNVL 377
++ +A+ ++ +K++ P V+
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVV 326
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 159/376 (42%), Gaps = 29/376 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A ++ + P S Y + + LAK+ + ++ L + D IT
Sbjct: 167 DQACQVFHEMEAKDIPPDSWSYG--ILIDGLAKAGKLNEAYKLFQ-RMLDSGITPSAVTY 223
Query: 102 NL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N+ I A D A+ F M G S +FN L+ A C R +L D+ L +
Sbjct: 224 NVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL-DEAFRLLKRMT 282
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ PD ++Y L+ C D A LL +M + + T VT T+++ L K G
Sbjct: 283 DDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 341
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA + M G DV YN + + G ER +EL+ +M GL P+ ++Y L
Sbjct: 342 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 401
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ CK + EA V+ ++ +GC+PN T+ I C +G D K+F E V
Sbjct: 402 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 461
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK------------KFPPNVLRAWKKVEEE 386
PD L L K + A ++R ++ +F + L K+E
Sbjct: 462 SPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMA 521
Query: 387 LGLV---------PAP 393
LG V PAP
Sbjct: 522 LGFVRDMVRGGQLPAP 537
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+SPD SYG+L+ +G + A L ++ + GV +TV YT++++ L + ++A
Sbjct: 5 NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+++M ++G YNV I + G E +LI +M + G PD ++YN +M
Sbjct: 65 RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ ++EA ++ +E GC+PN + T I LC D+A +VF E PD
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+ +L++GL K K+ EA
Sbjct: 185 SWSYGILIDGLAKAGKLNEA 204
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 6/300 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Q D A + F +M+ P S+ L+ ++ ++ LF +
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS- 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P ++Y +++ C + + D+ALEL M +KG + T+ +++ K+G +EA
Sbjct: 215 GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEA 274
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL M G DV Y+ I+ + + L+++M KP ++ N L+
Sbjct: 275 FRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA++V + + +G SP+ T+ T ++ C +G ++A ++ + V P+
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPN 394
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELGLVPAPAVGDGQK 400
T LV GL K ++ EA GV +K PN+ + LG A V G K
Sbjct: 395 VVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI---LGFCSAGQVDGGLK 451
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + Q G A + F +M G +I+F L+ C + D + I +
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI--Q 872
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y L+ C G D A ELL+EM G++ TY +++N L K GN EE
Sbjct: 873 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L E E G++ D Y + + Y G+ ++ +E++ EM GL+P +++N LM
Sbjct: 933 AVKLVGEFEAAGLNADTVTYTT-LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C + M+++ +K+ + G +PNATTF + C N A ++K+
Sbjct: 992 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE 1051
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T + LV+G + +KEA + + +K K
Sbjct: 1052 PDGKTYENLVKGHCNARNMKEAWFLFQEMKGK 1083
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Q G + A M+ G VIS++ ++ R DKV L +++ +K
Sbjct: 675 VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK- 733
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +YG ++ C +A E +EM +G+ T+ YTT+++ K+G+ A
Sbjct: 734 GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + EM + + DV Y I+ GD +L EM GL+PD I++ LM
Sbjct: 794 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNG 853
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +A +V+ + + GCSPN T+ T I LC G+ D A ++ E + P+
Sbjct: 854 YCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 913
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +V GL K I+EA
Sbjct: 914 IFTYNSIVNGLCKSGNIEEA 933
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ F + E+G +V S+N ++ F C R+ + +L K Y +PD ISY +
Sbjct: 653 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGY--TPDVISYSTV 710
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ +C G DK +L+ +M+ KG++ + TY +++ L + EAE +SEM +G+
Sbjct: 711 INGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGI 770
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D Y + GD + EM + PD ++Y +++ +C+ M EA K
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + G P+ TF + C +G+ A++V + P+ T L++GL
Sbjct: 831 LFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 890
Query: 354 KKKKIKEAKGVIRTIKK-KFPPNVL 377
K+ + A ++ + K PN+
Sbjct: 891 KEGDLDSANELLHEMWKIGLQPNIF 915
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 2/231 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A +M ++G ++ ++N+++ +S ++ L E +
Sbjct: 885 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAA 943
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+ D ++Y L+ ++C SG DKA E+L EM KG++ T VT+ ++N G E+
Sbjct: 944 GLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1003
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L + M KG+ + +N + + + + +M G++PD +Y L+
Sbjct: 1004 EKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKG 1063
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+C M EA +++ ++ G S + +T+ I F +A ++F +
Sbjct: 1064 HCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQ 1114
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + GM + + + M G + +FN L+ C R+ L I D +
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSR- 1048
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y L+K HC++ + +A L EM+ KG V+ TY+ ++ +K+ E
Sbjct: 1049 -GVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEM 263
A ++ +M + G+ D ++ Y G P+ + + IDE+
Sbjct: 1108 AREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1150
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G D M E G FN A + + DK +F+++ +++
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQH 403
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP+ ++YG L+ + C G D A N+M N+GV V + +++ L E A
Sbjct: 404 GLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERA 463
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM +G+ + +N I N G + LID M G++PD SY L++
Sbjct: 464 EELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISG 523
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC DEA+KV++G+ G SP T+ T ++ C + D AY +F+E + P
Sbjct: 524 YCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPG 583
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL + K+ EAK
Sbjct: 584 VVTYNTILHGLFQTKRFSEAK 604
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D F +M + G P V+++ ++ +++L+D+ +F ++
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN- 263
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +Y L+ + G + +++L EM +G++ TY ++LN L K G EA
Sbjct: 264 GFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREA 323
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M +KG+ V+ Y + I G + +D M + GL PD +N +
Sbjct: 324 RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSA 383
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K M+D+A ++ + ++G SPN + I LC G D A F + + P+
Sbjct: 384 YAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
LV GL K + A+ ++ + + PN +
Sbjct: 444 IVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAV 480
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 151/333 (45%), Gaps = 10/333 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+DI++ + +H SP Y + L K R D E N+
Sbjct: 391 DKAMDIFNKMRQHGLSPNVVNYGA--LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L+ ++ A +M + G + + FN L+ C R+ + ++ ++ +
Sbjct: 449 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLI--DLME 506
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD SY L+ +C +G +D+A ++ + M + G+ T VTY T+L+ +
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNF 277
+A L+ EM +KGV V YN + + +R KEL M ++G K D +YN
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLF--QTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK+ +DEA K+++ L G N TF I L G + A +F
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P+ T +L+ E L+++ ++E + ++K
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEK 717
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 154/386 (39%), Gaps = 56/386 (14%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE---- 97
D AL ++ + H+A P S R L R S L SH N ++ +E
Sbjct: 31 DDALKLFDEL-LHHARPASVRAFNHLLTA--VSRARCSSASELAVSHFN--RMVRECSDK 85
Query: 98 --PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKV 151
P LC LI + + G +H F + + G I+ N LL C R+ + +
Sbjct: 86 VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN------------------- 192
+L +P+ PD +SY +LLK C+ +++ALELL+
Sbjct: 146 DVLLQRMPE-LGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204
Query: 193 -------------------EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
EM ++G+ VTYTTV++ L K + AE ++ +M G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ YN I G + + ++++EM GLKPD +Y L+ CKN EA+
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ + G P +T+ I+ G + + V PD + +
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVL 377
K I +A + +++ PNV+
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVV 410
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 173/365 (47%), Gaps = 7/365 (1%)
Query: 9 RLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDL 67
RL + + +S IS A +++E DP ALDI++ VS+ + + YA
Sbjct: 31 RLFATSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYAS-- 88
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ LAK K+F I+ ++ D E NL++ + ++ M + + F + +
Sbjct: 89 IIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIV 148
Query: 128 TPR-SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+ S+ + + L S D L K NL P+ + +L+K HC +G
Sbjct: 149 REKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQA 208
Query: 187 ALELLNEMENKGVEV-TTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVR 244
A E++ EM++ V VTY+T++ L + G +EA + EM K + D YN+
Sbjct: 209 AFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNIL 268
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I G +R + +++ M+ G P+ +Y+ LM YCK + EAK+V+ ++ G
Sbjct: 269 INGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGM 328
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ ++ T I LC +G D+A ++ ++ D T +++ GL ++ + EA
Sbjct: 329 KPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALD 388
Query: 364 VIRTI 368
+++ +
Sbjct: 389 MVQKL 393
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 161/361 (44%), Gaps = 76/361 (21%)
Query: 47 IYSSVSKHYA-SPVSSR-----YAQDLTVRRLAKSKRFSD-IETLIESHKND-------- 91
I+ ++ KH++ S + R YA VR K S + L+ES + D
Sbjct: 120 IFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVN 179
Query: 92 --PKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPR----SVISFNALLFA- 141
K+ P C L++ + + G A F+ + E+ + R ++++++ L+
Sbjct: 180 ARSKLNLRPNTCIFNILVKHHCRNGDLQAA---FEVVKEMKSARVSYPNLVTYSTLIGGL 236
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C +L + + F+E+ K N+ PD ++Y +L+ C G D+A +L M++ G
Sbjct: 237 CENGKLKEAIE-FFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSP 295
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID 261
Y+ ++N K+G +EA+ +++E++ G
Sbjct: 296 NVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLG---------------------------- 327
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+KPDTISY L+ C C+ +DEA ++ + +++ C + TF + LC G
Sbjct: 328 ------MKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREG 381
Query: 322 NFDKAYKVFKESVMVHKIP------DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
FD+A MV K+P + + ++++ L +K ++++A ++ + + F P
Sbjct: 382 RFDEALD------MVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVP 435
Query: 375 N 375
+
Sbjct: 436 H 436
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 40/254 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI + G A+ F++M + +++N L+ C R ++ IL E K
Sbjct: 232 LIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTIL--EFMK 289
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
SP+ +Y +L+ +C G +A E+ NE+++ G++ T++YTT++NCL + G +
Sbjct: 290 SNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVD 349
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN--------------------------------- 247
EA L +M+ K D +NV +
Sbjct: 350 EATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVL 409
Query: 248 ---TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
T G+ + EL+ M + G P + N L+ C N M+ +A + GL E G
Sbjct: 410 NFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFK 469
Query: 305 PNATTFRTWIYHLC 318
P ++ T + +C
Sbjct: 470 PEHESWFTLVDLIC 483
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 38/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G A+ D+M E+G +I+ N L+ S + +L D++ + Y
Sbjct: 262 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-Y 320
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++YG +L C SG + A+ELL +ME + +++ V Y+ +++ L K G+ + A
Sbjct: 321 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 380
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN---------------------------TYG----- 250
L++EME KG+ ++ YN+ I T+
Sbjct: 381 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 440
Query: 251 ----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G +EL EM G+ PDTI+Y L+ +CK +D+A ++ + + GC PN
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF I C + D ++F++ + + D T L++G + K+ AK + +
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560
Query: 367 -TIKKKFPPNVL 377
+ +K PPN++
Sbjct: 561 EMVSRKVPPNIV 572
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 135/262 (51%), Gaps = 6/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + G D+A F++M+ G ++I++N L+ C R D +L D I +K
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N P+ +++ +L+ S G +A EL EM ++G+ T+TYT++++ K+ + ++
Sbjct: 427 IN--PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 484
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A ++ M KG D ++ +N+ I N Y + EL +M G+ DT++YN L+
Sbjct: 485 ANQMVDLMVSKGCDPNIRTFNILI-NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+ ++ AK++++ + PN T++ + LC +G +KA ++F++
Sbjct: 544 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 603
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
D +++ G+ K+ +A
Sbjct: 604 LDIGIYNIIIHGMCNASKVDDA 625
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 168/372 (45%), Gaps = 16/372 (4%)
Query: 8 RRLCTATTAAGS----STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRY 63
R+LC A +A G ++I+ S + L E +AL++ + + P
Sbjct: 235 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP--DLI 292
Query: 64 AQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+ V L S + ++ I+ ++E +T P L N++ GQ + AM
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL-NVMCKSGQTAL---AMEL 348
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
+M+E + ++ ++ + D LF+E+ K ++ + I+Y +L+ C
Sbjct: 349 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK-GITTNIITYNILIGGFC 407
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
++G D +LL +M + + VT++ +++ K+G EAE L EM +G+ D
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 467
Query: 240 AYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
Y I + ++ +++D M G P+ ++N L+ YCK +D+ +++ +
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 527
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G + T+ T I C G + A ++F+E V P+ T K+L++GL +
Sbjct: 528 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 587
Query: 359 KEAKGVIRTIKK 370
++A + I+K
Sbjct: 588 EKALEIFEKIEK 599
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 128/257 (49%), Gaps = 4/257 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + + D A + D M G ++ +FN L+ C +R+ D + LF ++
Sbjct: 471 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE-LFRKMSL 529
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + D ++Y L++ C+ G + A EL EM ++ V VTY +L+ L G +E
Sbjct: 530 R-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 588
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
+A ++ ++EK ++LD+ YN+ I + +L + G+KP +YN ++
Sbjct: 589 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + EA+ ++ +EE+G +P+ T+ I G G+ K+ K+ +E
Sbjct: 649 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFS 708
Query: 340 PDFNTVKLLVEGLVKKK 356
D +T+K++++ L K
Sbjct: 709 VDASTIKMVIDMLSDDK 725
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 117/269 (43%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S+ + G A +M G I++ +L+ + DK + D + K
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK- 495
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ +L+ +C + D LEL +M +GV TVTY T++ + G A
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ EM + V ++ Y + + G+ E+ E+ +++ + ++ D YN ++
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 615
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +D+A ++ L G P T+ I LC G +A +F++ PD
Sbjct: 616 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 675
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +L+ + ++ +I +K+
Sbjct: 676 GWTYNILIRAHLGDGDATKSVKLIEELKR 704
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 37/249 (14%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGV-------------------------- 199
P I + L + + D L L +ME KG+
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 243
Query: 200 ---------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
E T+T++T++N L +G EA L M + G D+ N +
Sbjct: 244 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 303
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G LID+M + G +P+ ++Y ++ CK+ A ++ +EE +A
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TI 368
+ I LC G+ D A+ +F E M + T +L+ G + + ++R I
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 369 KKKFPPNVL 377
K+K PNV+
Sbjct: 424 KRKINPNVV 432
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 160/369 (43%), Gaps = 41/369 (11%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DPDKAL ++ ++ Y+ V +LA+S+RF +ET++ ++ ++
Sbjct: 60 DPDKALSLFHDYLQNGFRHDYPSYSA--LVYKLARSRRFEAVETVLGYLQDFNVRCRDTL 117
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYD--------- 149
L YG+ G+ A+R F++M R++ SFNALL RL+D
Sbjct: 118 FIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSS 177
Query: 150 -------KVPI------------------LFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
VP +FDE+ ++ + P ++Y L+ C +G
Sbjct: 178 EMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLER-KVEPSVVTYNSLIGYLCRNGEL 236
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
KA L +M KG VTY ++ L G +EA+++ +ME +G + V
Sbjct: 237 GKAKGLFKDMIKKGKRPNAVTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGV- 295
Query: 245 ITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ N G G E K L+ EM+ +PD + YN L+ CK + EA K ++ G
Sbjct: 296 LMNDLGKKGKIEEAKLLLLEMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGG 355
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C NA T+R C G F++ KV ++ P T V GL+K I A
Sbjct: 356 CEANAATYRMLADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAF 415
Query: 363 GVIRTIKKK 371
V+ ++K+
Sbjct: 416 FVLEEMEKR 424
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
DKAL L ++ G +Y+ ++ L + E E + ++ +NVR
Sbjct: 62 DKALSLFHDYLQNGFRHDYPSYSALVYKLARSRRFEAVETVLGYLQD---------FNVR 112
Query: 245 ITNT--------YG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+T YG G + L +EM S+N L+ N+ + +AK++
Sbjct: 113 CRDTLFIALFEHYGKVGLVAKAIRLFNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQL 172
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ E G N+ F I G + +A KVF E + P T L+ L +
Sbjct: 173 FDRSSEMGFRLNSVPFNILIKGWLKKGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCR 232
Query: 355 KKKIKEAKGVIR-TIKKKFPPNVL 377
++ +AKG+ + IKK PN +
Sbjct: 233 NGELGKAKGLFKDMIKKGKRPNAV 256
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 153/278 (55%), Gaps = 9/278 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R Y +A D A+ TF+ M++ G ++ +FN+LL A +S+ K +FD++ ++
Sbjct: 146 IMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRF 205
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD +Y +LL+ + S K E+ ++M G + VTY +++ L K G EEA
Sbjct: 206 --SPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEA 263
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLM 279
+ +M +G Y++ + +TYG D R+++ + +M G+ PD + YN L+
Sbjct: 264 VCVVQDMSSRGCQPTTFIYSI-LVHTYGVDM-RIEDAVAAFLDMEKDGIMPDVVVYNALI 321
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T +CK + + A +V + ++ +G SPN+ T+ + L G D+AY+VF+ + K
Sbjct: 322 TAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKRCK- 380
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
PD +T ++++ + KI+ A V + ++ K+F P++
Sbjct: 381 PDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSM 418
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
++G++++ + + D+A+ N ME GV + ++L+ L K N +A+ ++ +M
Sbjct: 142 TFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKM 201
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+ D Y++ + +G P +++E+ +M AG +PD ++Y ++ CK
Sbjct: 202 NNR-FSPDAKTYSI-LLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGR 259
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++EA V + + GC P + ++ + A F + +PD
Sbjct: 260 VEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNA 319
Query: 348 LVEGLVKKKKIKEAKGVIRTIK-KKFPPNVLRAWKKVEEEL 387
L+ K KK + A V+ ++ PN R W + L
Sbjct: 320 LITAFCKVKKFENAFRVMDDMQGHGISPNS-RTWNIILNTL 359
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGD 252
M +GV T+ ++ + +EA ++ MEK GV ++AA+N ++ +
Sbjct: 132 MRKEGV-ANVETFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKN 190
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ +E+ D+M + PD +Y+ L+ + + + + ++VY + GC P+ T+
Sbjct: 191 VRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGI 249
Query: 313 WIYHLCGSGNFDKAYKVFKE 332
+ LC +G ++A V ++
Sbjct: 250 MVDALCKTGRVEEAVCVVQD 269
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 141/272 (51%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKK 161
+I Y G F+ A + F M + ++N+ + C R+ + +L + +
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLL--E 315
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ ++Y L+ C+ G DKA +EM N+G+ + TY +++ L+ + EE
Sbjct: 316 SGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEE 375
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE + EM +KGV+ DV YN++I N Y G+ ++ L DEM + ++P +Y L+
Sbjct: 376 AEDMIKEMREKGVEPDVVTYNIQI-NGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K M EA++ ++ + G P+ F I C +GN D+A+++ KE +
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVV 494
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++G +++K++EAK ++ +K++
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKER 526
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 154/314 (49%), Gaps = 10/314 (3%)
Query: 63 YAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
Y + + RL K +R + + L+ES +T LI G D A
Sbjct: 288 YTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA----LIDGCCNKGDLDKAFA 343
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
D+M G SV ++N L+ A + ++ + E+ +K + PD ++Y + + +
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK-GVEPDVVTYNIQINGY 402
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G++ KAL L +EM K + T TYT++++ K+ EAE + + K+G+ D+
Sbjct: 403 CRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDI 462
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+N I + G+ +R +L+ EM +A + PD +++N LM YC+ ++EAKK+ +
Sbjct: 463 IMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDE 522
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
++E G P+ ++ T I G+ A +VF E + + P T L++G K +
Sbjct: 523 MKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGE 582
Query: 358 IKEAKGVIRTIKKK 371
A+ ++R ++ K
Sbjct: 583 ADHAEELLREMQSK 596
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 122/283 (43%), Gaps = 56/283 (19%)
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
L T + FN L A R+RL K ++FD LLL ++C D
Sbjct: 123 LHTTTPTVIFNELSLA--RNRLNVKTTLVFD----------------LLLSAYCQFRKPD 164
Query: 186 KALELLN-----------------------------------EMENKGVEVTTVTYTTVL 210
+ALE LN EM ++ + VT+ ++
Sbjct: 165 EALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMI 224
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGL 268
N L ++G ++A+ ME GV +V YN + N Y G E ++ M+D L
Sbjct: 225 NILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT-VINGYCLRGKFEAASKIFKTMKDKNL 283
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
KPD +YN ++ CK ++EA V L E+G PNA T+ I C G+ DKA+
Sbjct: 284 KPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFA 343
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
E + + T LL+ L +K+I+EA+ +I+ +++K
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREK 386
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 51/281 (18%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAM 117
V+S + +L + L KR + E +I+ + + + + N+ I Y + G A+
Sbjct: 354 VASVFTYNLLIHALFLEKRIEEAEDMIKEMR-EKGVEPDVVTYNIQINGYCRCGNAKKAL 412
Query: 118 RTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
FD+M E +V ++ +L+ R+R+ + I K + PD I + L+
Sbjct: 413 SLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI--KEGMLPDIIMFNALID 470
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
HC +G+ D+A +LL EM+N V VT+ T++ ++ EEA++L EM+++G+
Sbjct: 471 GHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKP 530
Query: 237 DVAAYNVRITN------------------TYGGDPERL------------------KELI 260
D +YN I+ + G DP L +EL+
Sbjct: 531 DHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELL 590
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
EM+ G+ PD +Y +++ EA K + L EN
Sbjct: 591 REMQSKGITPDDSTYLYVI----------EAMKTNDDLVEN 621
>gi|414590555|tpg|DAA41126.1| TPA: hypothetical protein ZEAMMB73_459455 [Zea mays]
Length = 246
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 1/221 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E P+KY++ + IS ++K CD G A ++ ME GV +TYTT++
Sbjct: 5 LFEEGPEKYDVEVNDISCNTVVKMFCDMGDLRAAYRVMQGMERAGVRPDVITYTTLMAAF 64
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
YK G E + LW+ M +G +A YNVRI G + E+ +M AG+KPD
Sbjct: 65 YKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANEMARKMYVAGIKPDE 124
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
I+YN ++ + + AK V+ + GC PN ++T ++++C +FD A+++ K+
Sbjct: 125 ITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNNKVYQTMVHYICERRDFDLAFRLCKD 184
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+ + P +T+ L++GL+ K + K +++ + + P
Sbjct: 185 IMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKP 225
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 140/265 (52%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G D A T+ +M + G V+++++++ A +++ DK + + + K
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN- 265
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +L +C SG +A+ L +M + GVE VTY++++N L K G + EA
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G++ D+A Y + T G E + L+D M G++PD +N L+
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE-MHALLDLMVRNGIQPDHHVFNILIC 384
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K E +D+A V+ + ++G +PN + T I LC SG+ D A F++ + P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
+ L+ GL K +A+ +I
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELI 469
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++ Y G D M G FN L+ A + D+ ++F ++ +++
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM-RQH 405
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ + YG ++ C SGS D A+ +M ++G+ + YT++++ L ++A
Sbjct: 406 GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKA 465
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM +G+ L+ +N I ++ G ++L D M G+KPD I+YN L+
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C MDEA K+ + G P+ T+ T I C D A +FKE V P+
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T ++++GL ++ AK + +I K
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITK 614
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 35/262 (13%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+ ++I S+ + G + + FD M +G +I++N L+ C + D+ L +
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ PD ++YG L+ +C D AL L EM + GV +TY +L L+
Sbjct: 543 -VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A+ L+ + K G L+++ YN+ +
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNI----------------------------------I 627
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CKN + DEA ++++ L TF I L G D+A +F
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 687
Query: 339 IPDFNTVKLLVEGLVKKKKIKE 360
+PD T L+ E L+++ ++E
Sbjct: 688 VPDVRTYSLMAENLIEQGSLEE 709
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 39/273 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG D + + G I+F LL C R D + I+ + +
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM-TE 156
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGN 218
PD SY LLK CD S +ALELL+ M + G V+Y TVLN +K+G+
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+++A +TY EM D G+ PD ++Y+ +
Sbjct: 217 SDKA-----------------------YSTY-----------HEMLDRGILPDVVTYSSI 242
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + MD+A +V + +NG P+ T+ + ++ C SG +A K+
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T L+ L K + EA+ + ++ K+
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + Q G A + F +M G ++F L+ C + D + I +
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI--Q 892
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y L+ C G D A ELL+EM G++ TY +++N L K GN EE
Sbjct: 893 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 952
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L E E G++ D Y + + Y G+ ++ +E++ EM GL+P +++N LM
Sbjct: 953 AVKLVGEFEAAGLNADTVTYTT-LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 1011
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C + M+++ +K+ + G +PNATTF + + C N A ++K+
Sbjct: 1012 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 1071
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T + LV+G K + +KEA + + +K K
Sbjct: 1072 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 1103
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG A R + M + G +V+++ L+ + D L E+ K
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKI 928
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y ++ C SG+ ++A++L+ E E G+ TVTYTT+++ K G ++A
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + EM KG+ + +NV + G E ++L++ M G+ P+ ++N L+
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC + A +Y+ + G P+ T+ + C + N +A+ +F+E
Sbjct: 1049 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 1108
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+T +L++G +K+KK EA+ V ++++
Sbjct: 1109 VSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ F + E+G +V S+N ++ F C R+ + +L K Y +PD ISY +
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY--TPDVISYSTV 730
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ +C G DK +L+ M+ KG++ + Y +++ L + EAE +SEM ++G+
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 790
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D Y I GD + EM + PD ++Y +++ +C+ M EA K
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + G P++ TF I C +G+ A++V + P+ T L++GL
Sbjct: 851 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910
Query: 354 KKKKIKEAKGVIRTIKK-KFPPNVL 377
K+ + A ++ + K PN+
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIF 935
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 37/244 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A +M ++G ++ ++N+++ +S ++ L E +
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAA 963
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+ D ++Y L+ ++C SG DKA E+L EM KG++ T VT+ ++N G E+
Sbjct: 964 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 1023
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI------------TNTY------GGDPE---------- 254
E+L + M KG+ + +N + T Y G P+
Sbjct: 1024 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 1083
Query: 255 -----RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+KE L EM+ G +Y+ L+ + K + EA++V++ + G + +
Sbjct: 1084 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143
Query: 307 ATTF 310
F
Sbjct: 1144 KEIF 1147
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + GM + + + M G + +FN+L+ C R+ L I D +
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR- 1068
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y L+K HC + + +A L EM+ KG V+ TY+ ++ K+ E
Sbjct: 1069 -GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEM 263
A ++ +M ++G+ D ++ Y G P+ + + IDE+
Sbjct: 1128 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 148/304 (48%), Gaps = 8/304 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQ 122
++ V + + R D IE KN P EP + +++ A ++ A +
Sbjct: 234 NVVVNGICQEGRVDDA---IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 290
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M + G P +V++FN L+ R L + + ++IPK Y SP+ +SY LL + C
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK-YGCSPNSLSYNPLLHAFCKQK 349
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
DKA+ L+ M ++G V+Y T+L L + G + A L +++ KG + +YN
Sbjct: 350 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 409
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I T G + EL++EM GL+PD I+Y+ + C+ + +++A + + +++
Sbjct: 410 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 469
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G PN + I LC A +F + +P+ +T +L+EGL + IKEA
Sbjct: 470 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529
Query: 362 KGVI 365
+ ++
Sbjct: 530 RDLL 533
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 143/290 (49%), Gaps = 10/290 (3%)
Query: 94 ITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+ ++ Y C+ LIR G +A+ D+M V+++ LL A + Y +
Sbjct: 156 VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 215
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L DE+ K +PD ++Y +++ C G D A+E L + + G E TV+Y VL
Sbjct: 216 KLLDEMRDK-GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKG 274
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L E+AE L EM +KG +V +N+ I+ G E E+++++ G P+
Sbjct: 275 LCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPN 334
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV-- 329
++SYN L+ +CK + MD+A + + GC P+ ++ T + LC SG D A ++
Sbjct: 335 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 394
Query: 330 -FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
K+ + +NTV ++GL K K KEA ++ + K P+++
Sbjct: 395 QLKDKGCAPVLISYNTV---IDGLTKAGKTKEALELLNEMVSKGLQPDII 441
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 8/294 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ ++ + P + Y ++ ++ L ++R+ D E L+
Sbjct: 247 DDAIEFLKNLPSYGCEPNTVSY--NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G+ + A+ +Q+ + G + +S+N LL A + + DK D + +
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +SY LL + C SG D A+ELL+++++KG ++Y TV++ L K G +E
Sbjct: 365 -GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 423
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
A L +EM KG+ D+ Y+ D R+++ I +++D G++P+T+ YN +
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCRED--RIEDAIRAFGKVQDMGIRPNTVLYNAI 481
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ CK A ++ + NGC PN +T+ I L G +A + E
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 161/348 (46%), Gaps = 18/348 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL + S + A ++ +++L+ S R ++ ++ + D
Sbjct: 84 DEALRLVGSARRPDAGTCAA------LIKKLSASGRTAEARRVLAACGPDVMAYNA---- 133
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++ Y AG D A R E R + + L+ C R R + + +L DE+ +
Sbjct: 134 -MMAGYCGAGQVDAARR---WCAERAVERDAYTCDTLIRGLCGRGRTANALAVL-DEMLR 188
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + PD ++Y +LL++ C +A++LL+EM +KG VTY V+N + ++G +
Sbjct: 189 RRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 247
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
+A + G + + +YN+ + + E +EL+ EM G P+ +++N L+
Sbjct: 248 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 307
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ C+ +++ A +V E + + GCSPN+ ++ ++ C DKA V
Sbjct: 308 SFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 367
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
PD + L+ L + ++ A ++ +K K VL ++ V + L
Sbjct: 368 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 415
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 6/292 (2%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
IE N Q+ Y +LIRSYG AG+F ++ F M ++G SV++FN+LL +
Sbjct: 129 IEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLK 188
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
+FDE+ + Y ++PD ++ L+ C + D+A + EME V
Sbjct: 189 RGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVV 248
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKK--GVDLDVAAYNVRITNTYGGDPERLKELI-- 260
TY T+++ L + G + A L + M KK V ++ +Y + Y E + L+
Sbjct: 249 TYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTT-LLRGYCMKQEIDEALLVF 307
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE-NGCSPNATTFRTWIYHLCG 319
EM GLKP+ ++YN L+ + DE K G + SP+A TF I C
Sbjct: 308 HEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCD 367
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+G+ D A KVF+E + + PD + +L+ L + + +A+ + + +K
Sbjct: 368 AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEK 419
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 28/252 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Y D A+ F +M G + +++N L+ + + YD++
Sbjct: 290 LLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFT 349
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD ++ +L+K+HCD+G D A+++ EM N + + +Y+ ++ L + ++A
Sbjct: 350 TFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKA 409
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E L++E+ +K V L G E KP +YN +
Sbjct: 410 ETLFNELFEKEVLL--------------GKNE-------------CKPLAAAYNLMFEYL 442
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C N +A+KV+ L + G + + +++RT I LC G F AY++ + +PD
Sbjct: 443 CANGKAKQAEKVFRQLMKRG-AQDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDP 501
Query: 343 NTVKLLVEGLVK 354
T ++L++GL+K
Sbjct: 502 ETYEVLIDGLLK 513
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 10/305 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
+AK K++S + +L + + +T Y N LI + A+ +M +LG
Sbjct: 102 IAKKKQYSTVVSLC-NQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQP 160
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
I+FN L+ C + + V LF+E+ ++ + PD ISY ++ C SG++ AL+
Sbjct: 161 DAITFNTLINGRCIEGEIKEAVG-LFNEMVRRGH-QPDVISYSTVINGLCKSGNTSMALQ 218
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL +ME KG + V YTT+++ L K +A L SEM +G+ DV Y+ +
Sbjct: 219 LLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFC 278
Query: 250 G-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G L +EM + P+T+++ L+ CK M+ EA+ V+E + + G PNA
Sbjct: 279 SLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAY 338
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ + C + D+A KV +MV K P ++ +L+ G K++++ EAK ++
Sbjct: 339 TYNALMDGYCLNNQMDEAQKVL--DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLV 396
Query: 367 TIKKK 371
+ +K
Sbjct: 397 EMSEK 401
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 139/277 (50%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I ++G A++ +M+E G +++++ ++ + + L + L E+ +
Sbjct: 203 VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDR- 261
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +L C G ++A L NEM + V TVT+T +++ L K+G EA
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA 321
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ M KKG + + YN + + ++++D M D G P SYN L+
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILING 381
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +DEAK + + E +P+ T+ T + LC G +A +FKE +PD
Sbjct: 382 YCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPD 441
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
T L++GL K + EA +++++++ K P+++
Sbjct: 442 LMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIV 478
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y D A + D M + G V S+N L+ + R D+ L E+ +K
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEK- 401
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++Y L++ C G +AL L EM + G+ +TY+T+L+ L K G+ +EA
Sbjct: 402 ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA 461
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L M++ ++ D+ YN+ I + G E KEL ++ G++P +Y ++
Sbjct: 462 LKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKG 521
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + DEA +++ +E++G PN+ ++ I + + A ++ E V D
Sbjct: 522 LLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSAD 581
Query: 342 FNTVKLLVE 350
+T ++L++
Sbjct: 582 SSTFQMLLD 590
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 137/267 (51%), Gaps = 14/267 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I S + + + AM +M + G P V++++ +L C+ L ++ ILF+E+ +
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL-NEATILFNEMVGR 296
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CLYKQGNA 219
N+ P+ +++ +L+ C G +A + M KG E TY +++ CL Q
Sbjct: 297 -NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ--M 353
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
+EA+++ M KG V +YN+ I N Y RL E L+ EM + L PDT++Y+
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILI-NGYC-KRRRLDEAKSLLVEMSEKELTPDTVTYS 411
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM C+ EA +++ + +G P+ T+ T + LC G+ D+A K+ K S+
Sbjct: 412 TLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLK-SMQE 470
Query: 337 HKI-PDFNTVKLLVEGLVKKKKIKEAK 362
KI PD +L+EG+ K++ AK
Sbjct: 471 SKIEPDIVLYNILIEGMFIAGKLEVAK 497
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 130/275 (47%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + G + A F++M + ++F L+ + + + +F+ + KK
Sbjct: 273 ILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK- 331
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +Y L+ +C + D+A ++L+ M +KG +Y ++N K+ +EA
Sbjct: 332 GAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA 391
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L EM +K + D Y+ + G P+ L EM +GL PD ++Y+ L+
Sbjct: 392 KSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDG 451
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ +DEA K+ + ++E+ P+ + I + +G + A ++F + P
Sbjct: 452 LCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPT 511
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
T ++++GL+K+ EA + R ++ F PN
Sbjct: 512 IRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPN 546
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 5/273 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + GM A F+ M + G + ++NAL+ + D+ + D + K
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDK- 366
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P SY +L+ +C D+A LL EM K + TVTY+T++ L + G +EA
Sbjct: 367 GCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM G+ D+ Y+ + +G E LK L+ M+++ ++PD + YN L+
Sbjct: 427 LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK-LLKSMQESKIEPDIVLYNILIE 485
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
++ AK+++ L +G P T+ I L G D+AY++F++ +P
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKF 372
+ + ++++G ++ + A +I + K+F
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRF 578
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK----- 215
+ N P + +G L S + L N+M+ GV + ++NCL +
Sbjct: 85 RMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVV 144
Query: 216 ------------------------------QGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+G +EA L++EM ++G DV +Y+ I
Sbjct: 145 FAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVI 204
Query: 246 TNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G+ +L+ +M + G KP+ ++Y ++ CK+ ++++A + + + G
Sbjct: 205 NGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIP 264
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ T ++ C G+ ++A +F E V + +P+ T +LV+GL K+ + EA+ V
Sbjct: 265 PDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCV 324
Query: 365 IRTIKKK 371
+ KK
Sbjct: 325 FEAMTKK 331
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 7/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ D + FD+M G RSV S+ AL+ A R+ Y+ L D + K
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM-KND 205
Query: 163 NLSPDKISYGLLLKSHCDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP ++Y ++ + C G D L L EM ++G++ VTY T+L+ +G +
Sbjct: 206 KISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFL 278
EAE ++ M G+ D+ Y+ + T+G E++ +L+ EM G PD SYN L
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYS-HLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVL 323
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ Y K+ + EA V+ ++ GC+PNA T+ + SG +D ++F E +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 339 IPDFNTVKLLVEGLVKKKKIKE 360
PD T +L+E + KE
Sbjct: 384 DPDAATYNILIEVFGEGGYFKE 405
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G DK LE+ +EM ++GV + +YT ++N
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPD 271
+ G E + L M+ + + YN I G D E L L EMR G++PD
Sbjct: 187 GRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 246
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L++ + DEA+ V+ + + G P+ TT+ + +K +
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLS 306
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
E +PD + +L+E K IKEA GV ++
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 3/267 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G+ D A F M++ G + +++ L+ + R +KV L E+ +L PD S
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSL-PDITS 319
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +LL+++ SGS +A+ + ++M+ G TY+ +LN + G ++ +L+ EM+
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 231 KKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
D D A YN+ I GG + + L +M + ++PD +Y ++ K + +
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A+K+ + + N P++ + I + +++A F V P T L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLL 499
Query: 350 EGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ +KE++ ++ R + P N
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRN 526
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKK 161
LI +YG+ G ++ ++ D+M S++++N ++ AC R L ++ + LF E+ +
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEM-RH 240
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y LL + G D+A + M + G+ TY+ ++ K E+
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
L SEM G D+ +YNV + Y G + + +M+ AG P+ +Y+ L+
Sbjct: 301 VSDLLSEMASGGSLPDITSYNV-LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ ++ D+ ++++ ++ + P+A T+ I G F + +F + V +
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELG 388
PD T + ++ K ++A+ +++ + +A+ V E G
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 148/334 (44%), Gaps = 11/334 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DK L+++ + S S ++ + ++ R+ L++ KND KI+
Sbjct: 158 DKCLEVFDEMPSQGVS--RSVFSYTALINAYGRNGRYETSLELLDRMKND-KISPSILTY 214
Query: 102 N-LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
N +I + + G+ ++ + F +M G ++++N LL AC L D+ ++F +
Sbjct: 215 NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 274
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ PD +Y L+++ +K +LL+EM + G +Y +L K G+
Sbjct: 275 DG-GIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
+EA ++ +M+ G + Y+V + N +G G + +++L EM+ + PD +YN
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSV-LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF-DKAYKVFKESVMV 336
L+ + + E ++ + E P+ T+ I+ CG G + A K+ +
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGKGGLHEDARKILQYMTAN 451
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P ++E + +EA T+ +
Sbjct: 452 DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE 485
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L + ++ SD+ + + S + P IT L + +Y ++G AM F QM G
Sbjct: 291 TFGKLRRLEKVSDLLSEMASGGSLPDITSYNVL---LEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +++ LL +S YD V LF E+ K N PD +Y +L++ + G +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L ++M + +E TY ++ K G E+A ++ M + AY +
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY-TGVIE 465
Query: 248 TYGGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+G + L+ + M + G P +Y+ L+ + + ++ E++ + L ++G
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPR 525
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
N TF I G F++A K + + PD T++ ++
Sbjct: 526 NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/272 (18%), Positives = 118/272 (43%), Gaps = 10/272 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL---IESHKNDPKITQEPY 99
+A+ ++ + +P ++ Y+ L + +S R+ D+ L ++S DP
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNL--FGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L I +G+ G F + F M E + ++ ++FAC + L++ + +
Sbjct: 393 L---IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 449
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ P +Y ++++ + ++AL N M G + TY ++L + G
Sbjct: 450 AN-DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLV 508
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+E+E + S + G+ + +N +I GG E + +M + PD + +
Sbjct: 509 KESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAV 568
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
++ Y ++DE ++ +E ++ + P+ +
Sbjct: 569 LSVYSFARLVDECREQFEEMKASDILPSIMCY 600
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 163/363 (44%), Gaps = 12/363 (3%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIET 83
S +VS LR + + A D+ + V K +P S + + + + K + + E+
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP--SLFVYNALINSMCKDGKLDEAES 376
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
L + + + LI S+ + G D A+ +M E+G +V +++L+
Sbjct: 377 LFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+ LFDE+ L P+ + Y L+ +C G A L +EM KG+ T
Sbjct: 437 KLGKLRAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNT 495
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDE 262
T+T +++ L EA +L+ EM + V + YNV I + G+ R EL+DE
Sbjct: 496 YTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDE 555
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL--------EENGCSPNATTFRTWI 314
M + GL PDT +Y L++ C + EA++ L E GC PN T+ I
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALI 615
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
LC G DKA + +E + + +P+ NT ++ L + I++A + + + F
Sbjct: 616 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA 675
Query: 375 NVL 377
N +
Sbjct: 676 NTV 678
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 134/295 (45%), Gaps = 2/295 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K + F E ++ + E + NL+ + G A +++ + G
Sbjct: 292 VLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
S+ +NAL+ + + D+ LF+ + K L P+ ++Y +L+ S C G D AL
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHK-GLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
L +M G++ T Y+++++ K G A+ L+ EM G+ +V Y I+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ L EM G+ P+T ++ L++ C M EA K++ + E PN
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
T+ I C GN +A+++ E V +PD T + L+ GL ++ EA+
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
KK+ ++P Y L+ S C G D+A L N M +KG+ VTY+ +++ K+G
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A +M + G+ V Y+ I+ + G K L DEM GLKP+ + Y L
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ YCK + A ++Y + G SPN TF I LC + +A K+F E V +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEE--ELGLVP 391
IP+ T +L+EG K+ N +RA++ ++E E GLVP
Sbjct: 527 IPNEVTYNVLIEGHCKEG------------------NTVRAFELLDEMVEKGLVP 563
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 135/331 (40%), Gaps = 85/331 (25%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y + G +A R + +M G + +F AL+ + + LF E+ +
Sbjct: 465 SLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE- 523
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALEL------------------------------- 190
+N+ P++++Y +L++ HC G++ +A EL
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 191 --------------LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM------- 229
LNE+E G VTYT ++N L K G ++AE L EM
Sbjct: 584 AREFMNDLQGEQQKLNEIE--GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 641
Query: 230 ------------------EK---------KGVDLDVAAYNVRITNTYG-GDPERLKELID 261
EK +G + YN+ I G + E++
Sbjct: 642 NQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M D+G+ PD ISY+ ++ YC+ + EA K++E + G +P+ + IY C +G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761
Query: 322 NFDKAYKVFKESVMVHKI-PDFNTVKLLVEG 351
KA+++ ++ +M + P+ T L+ G
Sbjct: 762 ELTKAFEL-RDDMMRRGVKPNRATYNSLIHG 791
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G +V+++ AL+ + L DK +L E+ +L P++ +Y L G+ +K
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL-PNQNTYACFLDYLTSEGNIEK 661
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A++L +++ +G TVTY ++ K G +EA + M G+ D +Y+ I
Sbjct: 662 AIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIY 720
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
GD + +L + M + G+ PDT++YNFL+ C + +A ++ + + G P
Sbjct: 721 EYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 780
Query: 306 NATTFRTWIYHLC 318
N T+ + I+ C
Sbjct: 781 NRATYNSLIHGTC 793
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+K N S + + LL++++ + L ++ M + G+ T + VLN L +
Sbjct: 138 RKCNFST-TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQF 196
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
A L+ E+ G+ DV Y + + D R +E+I M +G +YN
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CKN+ + EA ++ L G + T+ T + LC F+ ++ E +
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P V LV+GL KK I A ++ +KK
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 9/196 (4%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI- 245
AL L +E+ + G+ YT V+ L + + A + ME G DL VA YNV I
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258
Query: 246 ---TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
N + +K L+ GL+ D +Y L+ CK E + +++ + E G
Sbjct: 259 GLCKNQRVWEAVEIKNLLSY---KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFG 315
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ + L GN A+ + + P L+ + K K+ EA+
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAE 375
Query: 363 GVIRTIKKK--FPPNV 376
+ + K FP +V
Sbjct: 376 SLFNNMGHKGLFPNDV 391
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL 154
Q Y C + G + A++ D + E G + +++N L+ C R+ + +L
Sbjct: 643 QNTYAC-FLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVL 700
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ I +SPD ISY ++ +C G +A++L M N+GV TV Y ++
Sbjct: 701 VNMIDS--GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCC 758
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
G +A L +M ++GV + A YN I T
Sbjct: 759 VTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 792
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 156/329 (47%), Gaps = 6/329 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+++ S+ P Y D+ + KR + + ++ D + EP
Sbjct: 258 DEAIELKRSMVDKGLVP--DLYTYDILINGFCMEKRSREAKLMLLEMI-DVGLKPEPITY 314
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI + + G + A R D+M G ++I +N LL ++ +K + E+ +
Sbjct: 315 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 374
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + PD +Y LL++ HC + +A ELL+EM+ + + T +TY+ ++N L + GN +
Sbjct: 375 K-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ EM G+ + Y +T + G E + +++ MR+ G+ PD YN L+
Sbjct: 434 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 493
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+CK + M+EA+ + E PNA T+ +I +G + A + F E + +
Sbjct: 494 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 553
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
P+ L+EG K+ + EA V R I
Sbjct: 554 PNVGIYTALIEGHCKEGNVTEAFSVFRFI 582
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A F + + V +++ L+ +R+ + +F E+ +K
Sbjct: 562 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK- 620
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y L+ C G+ DKA +LL EM KG+ VTY +++ L K G E A
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 680
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++E +G+ + Y + +P +L++EM G+ PD YN ++
Sbjct: 681 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK E ++A +++ + E G + + +F T I C SG +A + +E + IP+
Sbjct: 741 CCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 799
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T L++ K + EAK
Sbjct: 800 HVTYTSLIDHNCKAGMMGEAK 820
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 127/261 (48%), Gaps = 3/261 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G D A + ++M G ++++N L+ ++ ++ LFD+I +
Sbjct: 631 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 690
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+P+ ++Y ++ +C S + A +LL EM +GV Y +LN K+ E+
Sbjct: 691 -GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEK 749
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM +KG V+ +N I G + L++EM + P+ ++Y L+
Sbjct: 750 ALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 808
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK MM EAK+++ ++E P A T+ + ++ GN + +F+E V P
Sbjct: 809 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 868
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
D T ++++ ++ + EA
Sbjct: 869 DKMTYYVMIDAYCREGNVMEA 889
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 130/271 (47%), Gaps = 20/271 (7%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I ++ + G A R +M E ++RL D+ L + K
Sbjct: 229 NMISAHCKVGNVKDAKRVLLEMGE------------------KARLLDEAIELKRSMVDK 270
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+ C S +A +L EM + G++ +TY +++ +QG+ E+
Sbjct: 271 -GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ EM G++ ++ +N + G E+ E++ EM + G++PD+ +Y+ L+
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 389
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C+ + M A ++ + +++ +P T+ I LC GN + +E VM P
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 449
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ L+ K+ +++E++ ++ ++++
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQ 480
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 147/346 (42%), Gaps = 76/346 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD----- 156
L+ ++ + G + + ++M E G V +N+L+ C R+ + L +
Sbjct: 457 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 516
Query: 157 ---------------------EIPKKY-------NLSPDKISYGLLLKSHCDSGSSDKAL 188
EI +Y + P+ Y L++ HC G+ +A
Sbjct: 517 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 576
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ + ++ V TY+ +++ L + G EA ++SE+++KG+ + YN I+ +
Sbjct: 577 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 636
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ ++ +L++EM G+ PD ++YN L+ CK ++ AK +++ +E G +PN
Sbjct: 637 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 696
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD-------------------------- 341
T+ + C S N A+++ +E ++ PD
Sbjct: 697 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 756
Query: 342 -----------FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
FNT L+EG K K++EA ++ I+K+F PN
Sbjct: 757 MLEKGFASTVSFNT---LIEGYCKSGKLQEANHLLEEMIEKQFIPN 799
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 21/277 (7%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ SY + G A+ F S++S N+LL + + +FD + +
Sbjct: 160 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCA-H 218
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++ +HC G+ A +L EM K + +EA
Sbjct: 219 KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLL------------------DEA 260
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLMTC 281
L M KG+ D+ Y++ I R K ++ EM D GLKP+ I+YN L+
Sbjct: 261 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 320
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + +++A ++ + + G N + T + +C +G +KA ++ +E + PD
Sbjct: 321 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 380
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
T LL+EG + + + A ++ +KK K P VL
Sbjct: 381 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 417
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
F+ A+ F +M E G S +SFN L+ C +L + +L + I K++ P+ ++Y
Sbjct: 747 FEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF--IPNHVTY 803
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ +C +G +A L EM+ + V T TYT++L+ + GN E L+ EM
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
KG++ D Y V +ID G N + C K+E++ +
Sbjct: 864 KGIEPDKMTYYV---------------MIDAYCREG--------NVMEACKLKDEILVKG 900
Query: 292 KKVYEGLEEN--GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+ G CS A F+ +GN D+A +V + V + + ++ LV
Sbjct: 901 MPMKSGFRLGLPTCSVIARGFQI-------AGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 953
Query: 350 EG 351
+G
Sbjct: 954 DG 955
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 42 DKALDIYSS-VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
+KALD++ + K +AS VS + + KS + + L+E I
Sbjct: 748 EKALDLFQEMLEKGFASTVSF----NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+LI +AGM A R + +M E + ++ +LL +V LF+E+
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT------VTYTTVLNCLY 214
K + PDK++Y +++ ++C G+ +A +L +E+ KG+ + + T + +
Sbjct: 864 K-GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQ 922
Query: 215 KQGNAEEAERLWSEMEKKG 233
GN +EA + M K G
Sbjct: 923 IAGNMDEAAEVLRSMVKFG 941
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 140/265 (52%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G D A T+ +M + G V+++++++ A +++ DK + + + K
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN- 265
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +L +C SG +A+ L +M + GVE VTY++++N L K G + EA
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G++ D+A Y + T G E + L+D M G++PD +N L+
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE-MHALLDLMVRNGIQPDHHVFNILIC 384
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K E +D+A V+ + ++G +PN + T I LC SG+ D A F++ + P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
+ L+ GL K +A+ +I
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELI 469
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++ Y G D M G FN L+ A + D+ ++F ++ +++
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM-RQH 405
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ + YG ++ C SGS D A+ +M ++G+ + YT++++ L ++A
Sbjct: 406 GLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKA 465
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM +G+ L+ +N I ++ G ++L D M G+KPD I+YN L+
Sbjct: 466 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 525
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C MDEA K+ + G P+ T+ T I C D A +FKE V P+
Sbjct: 526 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T ++++GL ++ AK + +I K
Sbjct: 586 IITYNIILQGLFHTRRTAAAKELYVSITK 614
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 35/262 (13%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+ ++I S+ + G + + FD M +G +I++N L+ C + D+ L +
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ PD ++YG L+ +C D AL L EM + GV +TY +L L+
Sbjct: 543 VS-VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A+ L+ + K G L+++ YN+ +
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNI----------------------------------I 627
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CKN + DEA ++++ L TF I L G D+A +F
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 687
Query: 339 IPDFNTVKLLVEGLVKKKKIKE 360
+PD T L+ E L+++ ++E
Sbjct: 688 VPDVRTYSLMAENLIEQGSLEE 709
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 120/279 (43%), Gaps = 40/279 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG D + + G I+F LL C R D + I+ + +
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM-TE 156
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGN 218
PD SY LLK CD S +ALELL+ M + G V+Y TVLN +K+G+
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+++A +TY EM D G+ PD ++Y+ +
Sbjct: 217 SDKA-----------------------YSTY-----------HEMLDRGILPDVVTYSSI 242
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + MD+A +V + +NG P+ T+ + ++ C SG +A K+
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
P+ T L+ L K + EA+ + ++ K+ P++
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 341
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 142/279 (50%), Gaps = 6/279 (2%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + G+ G+ F + FD M G I+FN+LL C+R L++ LF + K
Sbjct: 266 VIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDK 325
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D +Y LL + C G D A E+++EM K + VTY+T+++ K G ++
Sbjct: 326 -GIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDD 384
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +++EM+ GV LD +YN + + Y G E+ ++ EM +AG++ D ++YN L+
Sbjct: 385 ALNMFNEMKFLGVGLDRVSYNT-LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALL 443
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K DE ++V+E ++ SPN T+ T I G + +A +VF+E
Sbjct: 444 AGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLK 503
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D L++ L K ++ + ++ + K+ PNV+
Sbjct: 504 ADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVV 542
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + G+++ A R F M + G + + ++N LL A + D + E+P K
Sbjct: 301 SLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTK 360
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ P+ ++Y ++ + G D AL + NEM+ GV + V+Y T+L+ K G E+
Sbjct: 361 -NILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQ 419
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLM 279
A + EME G+ DV YN + YG + ++ + +EM+ + P+ ++Y+ L+
Sbjct: 420 ALDVCKEMENAGIRKDVVTYNALLAG-YGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLI 478
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
Y K + EA +V+ ++ G + + I LC +G + + + E
Sbjct: 479 DVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDE 531
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 148/309 (47%), Gaps = 10/309 (3%)
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
AK+ R + ES KN+ Q +I + G+ G + A FD + G ++V
Sbjct: 170 AKAVRCFEFAVRRESGKNE----QGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTV 225
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD--KALEL 190
+F+AL+ A RS ++ +FD + K L P+ ++Y ++ + C G + K +E+
Sbjct: 226 YAFSALISAYGRSGYCNEAIKVFDSM-KSNGLMPNLVTYNAVIDA-CGKGGVEFKKVVEI 283
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-Y 249
+ M + GV+ +T+ ++L + G E A RL+S M KG+D D+ YN +
Sbjct: 284 FDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCK 343
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
GG + E++ EM + P+ ++Y+ ++ Y K +D+A ++ ++ G + +
Sbjct: 344 GGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVS 403
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ T + G F++A V KE D T L+ G K+ + E + V +K
Sbjct: 404 YNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMK 463
Query: 370 K-KFPPNVL 377
+ + PN+L
Sbjct: 464 RGRVSPNLL 472
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G F+ A+ +M+ G + V+++NALL + YD+V +F+E+ K+
Sbjct: 407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEM-KRG 465
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ ++Y L+ + G +A+E+ E + G++ V Y+ +++ L K G E +
Sbjct: 466 RVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESS 525
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L EM K+G+ +V YN I + +G
Sbjct: 526 VTLLDEMTKEGIRPNVVTYN-SIIDAFG 552
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y + G D A+ F++M LG +S+N LL + +++ + E+ +
Sbjct: 372 MIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEM-ENA 430
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D ++Y LL + D+ + EM+ V +TY+T+++ K G +EA
Sbjct: 431 GIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEA 490
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ E ++ G+ DV Y+ I G E L+DEM G++P+ ++YN ++
Sbjct: 491 MEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDA 550
Query: 282 YCKN 285
+ ++
Sbjct: 551 FGRS 554
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 182 GSSDKALE--LLN-EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS-EMEKKGVDLD 237
G DKALE LLN E G + YT +L L +G++ +A R + + ++ +
Sbjct: 133 GKDDKALENVLLNFESRLCGPD----DYTFLLRELGNRGDSAKAVRCFEFAVRRESGKNE 188
Query: 238 VAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ +T G G E K + D G +++ L++ Y ++ +EA KV+
Sbjct: 189 QGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVF 248
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGN--FDKAYKVFKESVMVHKIPD---FNTV 345
+ ++ NG PN T+ + CG G F K ++F + PD FN++
Sbjct: 249 DSMKSNGLMPNLVTYNA-VIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSL 302
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDIET 83
I+ S +++E D KA++++ S + Y + + L + RL +F E
Sbjct: 12 QITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEG 71
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD------------------- 124
++E K + + E ++ R YG+ A+R F +M+
Sbjct: 72 MLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILV 131
Query: 125 ----------------ELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPD 167
ELG P SV+S N L+ A C D +F E+P + PD
Sbjct: 132 EENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNR-GCQPD 190
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+YG L+ C G+ +A EL EME KG + VTYT++++ L + N +EA L
Sbjct: 191 SYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLE 250
Query: 228 EMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
EM++ ++ +V Y+ + GG + +L++ M P+ ++Y+ L+ CK
Sbjct: 251 EMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKER 310
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ EA ++ + + G PNA + I LC +G++ +A E V+
Sbjct: 311 KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVL 359
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A F +M++ G SV+++ +L+ +S D+ L +E+ K+
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEM-KRN 255
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ +Y L+ C G S +A++LL M+ K VTY+T++N L K+ EA
Sbjct: 256 DIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREA 315
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY------ 275
+ M +G+ + Y I+ G + IDEM G+ P+ S+
Sbjct: 316 VEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRM 375
Query: 276 -NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
N ++ C N A ++Y + S TF + C G+ KA ++ +E V
Sbjct: 376 HNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMV 435
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKF 372
+ IPD +++ GL +KK++EA + ++ +++KF
Sbjct: 436 LDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKF 474
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ + ++ME + T Y T+L+ L ++ + + A + EM + G+ V + N+ I
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIK 163
Query: 247 NTYGGDPERLKELID-------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ KE +D EM + G +PD+ +Y L+ C+ + EAK++++ +E
Sbjct: 164 ALC-----KNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEME 218
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ G S + T+ + I+ LC S N D+A + +E P+ T L++GL K
Sbjct: 219 QKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSS 278
Query: 360 EAKGVIRTIKKKFP-PNVL 377
+A ++ + KK PN++
Sbjct: 279 QAMQLLEVMDKKHHLPNMV 297
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + G A+ D+M E+ +++ + L+ C + R+ + + +L D + +
Sbjct: 175 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL-VLIDRMVE- 232
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD+++YG +L C SG+S AL+L +ME + ++ + V Y+ V++ L K G+ ++
Sbjct: 233 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 292
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN---------------------------TYG---- 250
A L++EME KG+ DV Y+ I T+
Sbjct: 293 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 352
Query: 251 -----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G KEL +EM G+ PDTI+YN L+ +CK + EA ++++ + GC P
Sbjct: 353 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 412
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ I C + D ++F+E IP+ T LV G + K+ AK +
Sbjct: 413 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 472
Query: 366 R-TIKKKFPPNVL 377
+ + + PP+V+
Sbjct: 473 QEMVSRGVPPSVV 485
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 141/291 (48%), Gaps = 6/291 (2%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
I+ ++E ++T P L L +S A A+ F +M+E SV+ ++ ++
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSA----LALDLFRKMEERNIKASVVQYSIVID 282
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+ + +D LF+E+ K + D ++Y L+ C+ G D ++L EM + +
Sbjct: 283 SLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 341
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKEL 259
VT++ +++ K+G EA+ L++EM +G+ D YN I + ++
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
D M G +PD ++Y+ L+ YCK + +D+ +++ + G PN T+ T + C
Sbjct: 402 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 461
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
SG + A ++F+E V P T +L++GL ++ +A + ++K
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 512
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 152/307 (49%), Gaps = 43/307 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I S + G FD A+ F++M+ G V+++++L+ C + D +L + I +
Sbjct: 280 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR- 338
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ PD +++ L+ G +A EL NEM +G+ T+TY ++++ K+ E
Sbjct: 339 -NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 397
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A +++ M KG + D+ Y++ I N+Y +R+ + L E+ GL P+TI+YN L
Sbjct: 398 ANQMFDLMVSKGCEPDIVTYSILI-NSYC-KAKRVDDGMRLFREISSKGLIPNTITYNTL 455
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE------ 332
+ +C++ ++ AK++++ + G P+ T+ + LC +G +KA ++F++
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515
Query: 333 -------SVMVHKI----------------------PDFNTVKLLVEGLVKKKKIKEAKG 363
++++H + PD T +++ GL KK + EA
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575
Query: 364 VIRTIKK 370
+ R +K+
Sbjct: 576 LFRKMKE 582
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 130/257 (50%), Gaps = 4/257 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + A + FD M G +++++ L+ + +++ D LF EI K
Sbjct: 384 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 443
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ I+Y L+ C SG + A EL EM ++GV + VTY +L+ L G +
Sbjct: 444 -GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 502
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +M+K + L + YN+ I + L + D G+KPD ++YN ++
Sbjct: 503 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 562
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI-YHLCGSGNFDKAYKVFKESVMVHKI 339
CK + EA ++ ++E+GC+P+ T+ I HL GSG + ++ +E +
Sbjct: 563 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEMKVCGFS 621
Query: 340 PDFNTVKLLVEGLVKKK 356
D +T+K++++ L ++
Sbjct: 622 ADSSTIKMVIDMLSDRR 638
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 41/287 (14%)
Query: 114 DHAMRTFDQMDE---LGTPRSVISFNALLFACTRSRLYD--------------------- 149
+ A+ F+ M + L TP I FN L A R++ YD
Sbjct: 81 NDAIDLFESMIQSRPLPTP---IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 137
Query: 150 -----------KVPILFDEIPKKYNLS--PDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
K+ F + + + L PD I++ L+ C G +A+ L++ M
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPER 255
VT +T++N L +G EA L M + G D Y + G+
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+L +M + +K + Y+ ++ CK+ D+A ++ +E G + T+ + I
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
LC G +D K+ +E + + IPD T L++ VK+ K+ EAK
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M G++ D + ++ CYC+ + + A V + G P+ TF T + C G
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+A + V + + PD TV L+ GL K ++ EA +I R ++ F P+
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 238
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 156/329 (47%), Gaps = 6/329 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+++ S+ P Y D+ + KR + + ++ D + EP
Sbjct: 267 DEAIELKRSMVDKGLVP--DLYTYDILINGFCMEKRSREAKLMLLEMI-DVGLKPEPITY 323
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI + + G + A R D+M G ++I +N LL ++ +K + E+ +
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + PD +Y LL++ HC + +A ELL+EM+ + + T +TY+ ++N L + GN +
Sbjct: 384 K-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ EM G+ + Y +T + G E + +++ MR+ G+ PD YN L+
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLI 502
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+CK + M+EA+ + E PNA T+ +I +G + A + F E + +
Sbjct: 503 IGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVL 562
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
P+ L+EG K+ + EA V R I
Sbjct: 563 PNVGIYTALIEGHCKEGNVTEAFSVFRFI 591
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 139/271 (51%), Gaps = 2/271 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I ++ + G A R +M E G +++++N ++ R+RL D+ L + K
Sbjct: 220 NMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK 279
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+ C S +A +L EM + G++ +TY +++ +QG+ E+
Sbjct: 280 -GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 338
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ EM G++ ++ +N + G E+ E++ EM + G++PD+ +Y+ L+
Sbjct: 339 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 398
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C+ + M A ++ + +++ +P T+ I LC GN + +E VM P
Sbjct: 399 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 458
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ L+ K+ +++E++ ++ ++++
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQ 489
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A F + + V +++ L+ +R+ + +F E+ +K
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK- 629
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y L+ C G+ DKA +LL EM KG+ VTY +++ L K G E A
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 689
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++E +G+ + Y + +P +L++EM G+ PD YN ++
Sbjct: 690 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 749
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK E ++A +++ + E G + + +F T I C SG +A + +E + IP+
Sbjct: 750 CCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPN 808
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T L++ K + EAK
Sbjct: 809 HVTYTSLIDHNCKAGMMGEAK 829
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 3/287 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G D A + ++M G ++++N L+ ++ ++ LFD+I +
Sbjct: 640 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 699
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+P+ ++Y ++ +C S + A +LL EM +GV Y +LN K+ E+
Sbjct: 700 -GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEK 758
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM +KG V+ +N I G + L++EM + P+ ++Y L+
Sbjct: 759 ALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLID 817
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK MM EAK+++ ++E P A T+ + ++ GN + +F+E V P
Sbjct: 818 HNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 877
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
D T ++++ ++ + EA + I K P + A+ + + L
Sbjct: 878 DKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQAL 924
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ SY + G A+ F S++S N+LL + + +FD + +
Sbjct: 151 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCA-H 209
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++ +HC G+ A +L EM KG VTY ++ L + +EA
Sbjct: 210 KVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEA 269
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLMTC 281
L M KG+ D+ Y++ I R K ++ EM D GLKP+ I+YN L+
Sbjct: 270 IELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 329
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + +++A ++ + + G N + T + +C +G +KA ++ +E + PD
Sbjct: 330 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 389
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
T LL+EG + + + A ++ +KK K P VL
Sbjct: 390 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL 426
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 147/346 (42%), Gaps = 76/346 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD----- 156
L+ ++ + G + + ++M E G V +N+L+ C R+ + L +
Sbjct: 466 LMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR 525
Query: 157 ---------------------EIPKKY-------NLSPDKISYGLLLKSHCDSGSSDKAL 188
EI +Y + P+ Y L++ HC G+ +A
Sbjct: 526 LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAF 585
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ + ++ V TY+ +++ L + G EA ++SE+++KG+ + YN I+ +
Sbjct: 586 SVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS 645
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ ++ +L++EM G+ PD ++YN L+ CK ++ AK +++ +E G +PN
Sbjct: 646 CKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNC 705
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD-------------------------- 341
T+ + C S N A+++ +E ++ PD
Sbjct: 706 VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQE 765
Query: 342 -----------FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
FNT L+EG K K++EA ++ I+K+F PN
Sbjct: 766 MLEKGFASTVSFNT---LIEGYCKSGKLQEANHLLEEMIEKQFIPN 808
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 21/249 (8%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
F+ A+ F +M E G S +SFN L+ C +L + +L + I K++ P+ ++Y
Sbjct: 756 FEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF--IPNHVTY 812
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ +C +G +A L EM+ + V T TYT++L+ + GN E L+ EM
Sbjct: 813 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 872
Query: 232 KGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG++ D Y V I + Y G+ +L DE+ G+ +Y+ L+ CK E
Sbjct: 873 KGIEPDKMTYYVMI-DAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFF 931
Query: 290 EAKKVYEGLEENG-------CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
E K+ + E+G CS A F+ +GN D+A +V + V + +
Sbjct: 932 EVLKLLNEIGESGFRLGLPTCSVIARGFQI-------AGNMDEAAEVLRSMVKFGWVSNT 984
Query: 343 NTVKLLVEG 351
++ LV+G
Sbjct: 985 TSLGDLVDG 993
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 42 DKALDIYSS-VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
+KALD++ + K +AS VS + + KS + + L+E I
Sbjct: 757 EKALDLFQEMLEKGFASTVSF----NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 812
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+LI +AGM A R + +M E + ++ +LL +V LF+E+
Sbjct: 813 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 872
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + PDK++Y +++ ++C G+ +A +L +E+ KG+ ++ Y ++ L K+
Sbjct: 873 K-GIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFF 931
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTIS 274
E +L +E+ + G L + +V I + G+ + E++ M G +T S
Sbjct: 932 EVLKLLNEIGESGFRLGLPTCSV-IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTS 986
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + G A+ D+M E+ +++ + L+ C + R+ + + +L D + +
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL-VLIDRMVE- 203
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD+++YG +L C SG+S AL+L +ME + ++ + V Y+ V++ L K G+ ++
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN---------------------------TYG---- 250
A L++EME KG+ DV Y+ I T+
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 251 -----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G KEL +EM G+ PDTI+YN L+ +CK + EA ++++ + GC P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ I C + D ++F+E IP+ T LV G + K+ AK +
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 366 R-TIKKKFPPNVL 377
+ + + PP+V+
Sbjct: 444 QEMVSRGVPPSVV 456
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 141/291 (48%), Gaps = 6/291 (2%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
I+ ++E ++T P L L +S A A+ F +M+E SV+ ++ ++
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSA----LALDLFRKMEERNIKASVVQYSIVID 253
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+ + +D LF+E+ K + D ++Y L+ C+ G D ++L EM + +
Sbjct: 254 SLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKEL 259
VT++ +++ K+G EA+ L++EM +G+ D YN I + ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
D M G +PD ++Y+ L+ YCK + +D+ +++ + G PN T+ T + C
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
SG + A ++F+E V P T +L++GL ++ +A + ++K
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 152/307 (49%), Gaps = 43/307 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I S + G FD A+ F++M+ G V+++++L+ C + D +L + I +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR- 309
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ PD +++ L+ G +A EL NEM +G+ T+TY ++++ K+ E
Sbjct: 310 -NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A +++ M KG + D+ Y++ I N+Y +R+ + L E+ GL P+TI+YN L
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILI-NSYC-KAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE------ 332
+ +C++ ++ AK++++ + G P+ T+ + LC +G +KA ++F++
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 333 -------SVMVHKI----------------------PDFNTVKLLVEGLVKKKKIKEAKG 363
++++H + PD T +++ GL KK + EA
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 364 VIRTIKK 370
+ R +K+
Sbjct: 547 LFRKMKE 553
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 130/257 (50%), Gaps = 4/257 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + A + FD M G +++++ L+ + +++ D LF EI K
Sbjct: 355 SLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ I+Y L+ C SG + A EL EM ++GV + VTY +L+ L G +
Sbjct: 415 -GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +M+K + L + YN+ I + L + D G+KPD ++YN ++
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI-YHLCGSGNFDKAYKVFKESVMVHKI 339
CK + EA ++ ++E+GC+P+ T+ I HL GSG + ++ +E +
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEMKVCGFS 592
Query: 340 PDFNTVKLLVEGLVKKK 356
D +T+K++++ L ++
Sbjct: 593 ADSSTIKMVIDMLSDRR 609
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 41/287 (14%)
Query: 114 DHAMRTFDQMDE---LGTPRSVISFNALLFACTRSRLYD--------------------- 149
+ A+ F+ M + L TP I FN L A R++ YD
Sbjct: 52 NDAIDLFESMIQSRPLPTP---IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 150 -----------KVPILFDEIPKKYNLS--PDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
K+ F + + + L PD I++ L+ C G +A+ L++ M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPER 255
VT +T++N L +G EA L M + G D Y + G+
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+L +M + +K + Y+ ++ CK+ D+A ++ +E G + T+ + I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
LC G +D K+ +E + + IPD T L++ VK+ K+ EAK
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G++ D + ++ CYC+ + + A V + G P+ TF T + C G +A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ V + + PD TV L+ GL K ++ EA +I R ++ F P+
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 2/216 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
++PD +Y +L+ C + +DKA E+L+EM ++GV TVT+ ++++ L K G E A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 224 RLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L + M ++ YN I+ + +R K L+DE +G PD ++Y+ L
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK +DEA ++ + + NGC+PN T+ T I LC + +KAY++ + V +PD
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 343 NTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNVL 377
T ++V+GL K+ ++ +A K V +K+ P+V+
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 221
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 10/271 (3%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A +M G +++++N L+ ++ +K L + + PD ++
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS-GFVPDVVT 187
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +++ C G DKAL+++ M +G + +TYT ++ L + G +EA ++ EM
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
K D AY V + N Y R KE ++D +R P YN LM YCK
Sbjct: 248 SKDCTADALAY-VSLVNGYC-KSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGR 302
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+DE V+E + GC PN T+ + LC G D+A+ + +PD + +
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362
Query: 348 LVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+++GL K K KEA+ V+ + I+ PP+ +
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAV 393
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 135/282 (47%), Gaps = 3/282 (1%)
Query: 90 NDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
N+ K+ + + N LI +A D A +M + G ++FN+++ ++ +
Sbjct: 2 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 61
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
++ L + ++ N P +Y L+ C + D+A L++E + G VTY+
Sbjct: 62 ERAHSLLAVMAER-NCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG 267
+ + L K+G +EA L EM G ++ YN I E+ EL++ + +G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
PD ++Y ++ CK +D+A K+ EG+ + GC+P+ T+ + LC +G D+A+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+FKE V D LV G K + KEA+ V+ I+
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 282
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 150/355 (42%), Gaps = 46/355 (12%)
Query: 42 DKALDIYSSVSKHYASP--VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D+A ++ +S + +P V+ D + K + +ETL+ S +T
Sbjct: 132 DEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTI- 190
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
++ + G D A++ + M + G SVI++ AL+ R+ D+ +F E+
Sbjct: 191 ---IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 160 KKYNLSPDKISY--------------------------------GLLLKSHCDSGSSDKA 187
K + + D ++Y L+ +C G D+
Sbjct: 248 SK-DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEI 306
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ +M +G TY V++ L K G +EA M G DV +YN+ I
Sbjct: 307 PNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDG 366
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ P+ ++++D+M AG+ PD ++YN LM +CK E D+A + + + + G P+
Sbjct: 367 LFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPD 426
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKE----SVMVHKIPDFNTV--KLLVEGLVKK 355
T+ T I L + AY++ E +V +NT+ +L EG +K+
Sbjct: 427 NVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQ 481
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 125/289 (43%), Gaps = 42/289 (14%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
A + DQM + G P +++N L+ C R D V IL + I K + PD ++Y
Sbjct: 375 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI--KAGVDPDNVTYNT 432
Query: 174 LLKSH------------------------------------CDSGSSDKALELLNEMENK 197
L+ C G +AL L++ M
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK 257
GVE TVTY ++ L K+G +EA L SEM+ + +V+ V I +R
Sbjct: 493 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT--LRDEVSYTTVIIGLCKAEQLDRAS 550
Query: 258 ELIDEMRDA-GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+L EM GL + ++N L+ + K + +DEA + E + + GCSP+ T+ I
Sbjct: 551 KLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITC 610
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
LC DKA+++F E + + + +L+ GL + + KEA V+
Sbjct: 611 LCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVL 659
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 127/294 (43%), Gaps = 11/294 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLIESHKNDPKITQEPYL 100
D A+ I ++ K P + Y + + L+++ R D E + E +N ++
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTY--NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 466
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIP 159
+I + G A+ D M G + +++N + C RL D+ L E+
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRL-DEASSLLSEM- 524
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGN 218
+ D++SY ++ C + D+A +L EM KG+ +T+ T+ +++ K
Sbjct: 525 ---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKR 581
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
+EA L M ++G V YN+ IT D ++ EL DEM G+ ++SY
Sbjct: 582 LDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 641
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
L+ C EA +V E + + C + R L G G ++A ++ +
Sbjct: 642 LIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLR 695
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M + + PD +YN L+ CK D+A ++ + + G +P+ TF + + LC +G
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
F++A+ + + P T L+ GL K++ + AK ++ + F P+V+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVV 116
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + D A+ + M + G SVI++N ++ + DK LFDE+ +
Sbjct: 572 LIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR- 630
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +SY +L+ C G +AL++L EM + E+ + + L QG EEA
Sbjct: 631 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEA 690
Query: 223 ERLWSEMEKK 232
L M K
Sbjct: 691 AELLRRMTTK 700
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 173/333 (51%), Gaps = 13/333 (3%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
++S ++Y V + ++ + LAK +++ + L+ + +N + E + C ++R Y
Sbjct: 45 WASKQRNYVHSVRAYHSM---IESLAKIRQYQMVWDLVNAMRNKEILNVEAF-CIIMRKY 100
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+A + A+ TF+ M++ +V +FN LL A +S+ K +FD + ++ PD
Sbjct: 101 ARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQF--VPD 158
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y +L++ + + KA E+ EM + G VTY+ +++ L K G +EA +
Sbjct: 159 SKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVK 218
Query: 228 EMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCK 284
EM+ Y+V + +TYG + R+++ + EM G+ D +YN L++ +CK
Sbjct: 219 EMDYNNCKPSSFIYSV-LVHTYGVE-NRIEDAVSTFLEMERNGVMADVAAYNALISAFCK 276
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
M +V + ++ G +PN+ T I L G G D+A+K+F+ + V + PD ++
Sbjct: 277 ANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCE-PDVDS 335
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
++++ +K++ A + + +KKK F P++
Sbjct: 336 YTMIIKMFCGRKELDMALKIWKYMKKKQFVPSM 368
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMD-ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++R + AGM A R F+ + SV ++++++ + + R Y V L + + K
Sbjct: 28 VLRRFENAGML--AYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNK 85
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+ + ++ ++++ + + ++A+ N ME ++ + +L+ L K N +
Sbjct: 86 EILNVE--AFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRK 143
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLM 279
A+ ++ M+ + V D Y++ I +G P + +E+ EM D+G PD ++Y+ ++
Sbjct: 144 AQEIFDNMKDQFVP-DSKTYSILIEG-WGRAPNLPKAREIYREMIDSGCIPDEVTYSIMV 201
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +DEA ++ + ++ N C P++ + ++ + A F E +
Sbjct: 202 DVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVM 261
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPN 375
D L+ K K+K V++ + K PN
Sbjct: 262 ADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPN 298
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLC 101
KA +IY + P Y+ + V L K+ R + +E + E N+ K + Y
Sbjct: 177 KAREIYREMIDSGCIPDEVTYS--IMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSV 234
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
L+ +YG + A+ TF +M+ G V ++NAL+ A C +++ + +L D K
Sbjct: 235 -LVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLK 293
Query: 161 KYN--------------------------------LSPDKISYGLLLKSHCDSGSSDKAL 188
N PD SY +++K C D AL
Sbjct: 294 GVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKVCEPDVDSYTMIIKMFCGRKELDMAL 353
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
++ M+ K + T++ ++N L + GNA +A L EM +KG+
Sbjct: 354 KIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGI 399
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 101 CNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEI 158
CN+I S G D A + F +M ++ P V S+ ++ C R L + I +
Sbjct: 302 CNIIINSLIGRGETDEAFKIFRRMIKVCEP-DVDSYTMIIKMFCGRKELDMALKIW--KY 358
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
KK P ++ +L+ C G++ +A LL EM KG+ + T+ + + L K+G
Sbjct: 359 MKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGR 418
Query: 219 AEEAERLWSEM 229
+ + L +M
Sbjct: 419 KDVLKFLQEKM 429
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 128/261 (49%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ YG G + M G + FN A + + DK +F+++ +++
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQH 59
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD +SYG L+ + C G D A N+M N+GV V +++++ L E+
Sbjct: 60 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKV 119
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L+ EM G+ ++ +N + N G + L+D + G++PD ISYN L+
Sbjct: 120 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 179
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C +DEA K+ EG+ G PN+ ++ T ++ C +G D AY +F++ + P
Sbjct: 180 HCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPG 239
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL + K+ EAK
Sbjct: 240 VVTYNTILHGLFQTKRFSEAK 260
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 10/334 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+DI++ + +H SP + Y + L K R D E N+
Sbjct: 47 DKAMDIFNKMRQHGLSPDAVSYGA--LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFS 104
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L+ ++ F +M +G +++ FN +L C R+ + L D I +
Sbjct: 105 SLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQR-LVDSI-E 162
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD ISY L+ HC +G+ D+A +LL M + G++ + +Y T+L+ K G +
Sbjct: 163 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRID 222
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNF 277
A L+ +M G+ V YN + + +R KEL M ++G K +YN
Sbjct: 223 SAYSLFRKMLSNGITPGVVTYNTILHGLF--QTKRFSEAKELYLNMINSGTKWGIYTYNT 280
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK+ +DEA K+++ L G N TF I L G + A +F
Sbjct: 281 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 340
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+PD T +++ E L+++ ++E + ++K
Sbjct: 341 LVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKN 374
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDT 272
+G E L + M G+ + +N+ + Y G ++ ++ ++MR GL PD
Sbjct: 7 NKGALSEMHDLLNLMVANGISPNHHIFNIFFS-AYAKCGMIDKAMDIFNKMRQHGLSPDA 65
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+SY L+ CK +D+A+ + + G +PN F + +Y LC ++K ++F E
Sbjct: 66 VSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFE 125
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ V P+ ++ L K+ ++ E + ++ +I+
Sbjct: 126 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 162
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 87/213 (40%), Gaps = 35/213 (16%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+SP+ + + ++ G DKA+++ N+M G+ V+Y +++ L K G ++AE
Sbjct: 26 ISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAE 85
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+++M I+E G+ P+ + ++ L+ C
Sbjct: 86 VKFNQM------------------------------INE----GVTPNIVVFSSLVYGLC 111
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ ++ ++++ + G PN F T + +LC G + ++ + PD
Sbjct: 112 SIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVI 171
Query: 344 TVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+ L++G I EA ++ + PN
Sbjct: 172 SYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPN 204
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/205 (18%), Positives = 88/205 (42%), Gaps = 3/205 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A ++ + + +P Y + + L ++KRFS+ + L + N
Sbjct: 222 DSAYSLFRKMLSNGITPGVVTY--NTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYN 279
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ ++ D A + F + G ++I+F ++ A + + LF IP
Sbjct: 280 TILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 339
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD ++Y ++ ++ + GS ++ L + ME G + ++ L +G+
Sbjct: 340 -GLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISR 398
Query: 222 AERLWSEMEKKGVDLDVAAYNVRIT 246
A S+++++ ++ + ++ I+
Sbjct: 399 AGAYLSKLDERNFSVEASTTSMLIS 423
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + Q G A + F +M G ++F L+ C + D + I +
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI--Q 449
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y L+ C G D A ELL+EM G++ TY +++N L K GN EE
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L E E G++ D Y + + Y G+ ++ +E++ EM GL+P +++N LM
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTT-LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C + M+++ +K+ + G +PNATTF + + C N A ++K+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T + LV+G K + +KEA + + +K K
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG A R + M + G +V+++ L+ + D L E+ K
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKI 485
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y ++ C SG+ ++A++L+ E E G+ TVTYTT+++ K G ++A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + EM KG+ + +NV + G E ++L++ M G+ P+ ++N L+
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC + A +Y+ + G P+ T+ + C + N +A+ +F+E
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS 665
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+T +L++G +K+KK EA+ V ++++
Sbjct: 666 VSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ F + E+G +V S+N ++ F C R+ + +L K Y +PD ISY +
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY--TPDVISYSTV 287
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ +C G DK +L+ M+ KG++ + Y +++ L + EAE +SEM ++G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D Y I GD + EM + PD ++Y +++ +C+ M EA K
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + G P++ TF I C +G+ A++V + P+ T L++GL
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 354 KKKKIKEAKGVIRTIKK-KFPPNVL 377
K+ + A ++ + K PN+
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIF 492
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 37/244 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A +M ++G ++ ++N+++ +S ++ L E
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA- 520
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+ D ++Y L+ ++C SG DKA E+L EM KG++ T VT+ ++N G E+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI------------TNTY------GGDPE---------- 254
E+L + M KG+ + +N + T Y G P+
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 255 -----RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+KE L EM+ G +Y+ L+ + K + EA++V++ + G + +
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 307 ATTF 310
F
Sbjct: 701 KEIF 704
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + GM + + + M G + +FN+L+ C R+ L I D +
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR- 625
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y L+K HC + + +A L EM+ KG V+ TY+ ++ K+ E
Sbjct: 626 -GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEM 263
A ++ +M ++G+ D ++ Y G P+ + + IDE+
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 170/314 (54%), Gaps = 12/314 (3%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V LAK +++ + ++ + + + E + ++R Y +A FD A+ TF+ M++ G
Sbjct: 109 VVASLAKIRQYQLMWDVVAIMRREGVVNVETFGI-IMRKYARAQKFDEAVYTFNIMEKYG 167
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ +FN+LL A +S+ K +FD++ ++N PD +Y +LL+ + + K
Sbjct: 168 VVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFN--PDAKTYSILLEGWGKAPNLPKM 225
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
E+ +EM + G + VTY +++ L K G EEA + +M +G Y+V + +
Sbjct: 226 REVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSV-LVH 284
Query: 248 TYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
TYG + R+++ + +M G+ PD + YN L+T +CK + + A +V + +E +G +
Sbjct: 285 TYGVE-MRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIA 343
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKG 363
PN+ T+ + L G D+AY+VF+ M+ + PD +T ++++ + ++ A
Sbjct: 344 PNSRTWNIILNKLISLGKDDEAYRVFRR--MIKRCQPDSDTYTMMIKMFCENDNVEMALK 401
Query: 364 VIRTIK-KKFPPNV 376
V + ++ K+F P++
Sbjct: 402 VWKYMRLKQFLPSM 415
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 7/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ D + FD+M G RSV S+ AL+ A R+ Y+ L D + K
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM-KNE 205
Query: 163 NLSPDKISYGLLLKSHCDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP ++Y ++ + C G D L L EM ++G++ VTY T+L+ +G +
Sbjct: 206 KISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFL 278
EAE ++ M G+ D+ Y+ + T+G E++ +L+ EM G PD SYN L
Sbjct: 265 EAEMVFRTMNDGGIVPDLTTYS-HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ Y K+ + EA V+ ++ GC+PNA T+ + SG +D ++F E +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 339 IPDFNTVKLLVEGLVKKKKIKE 360
PD T +L+E + KE
Sbjct: 384 DPDAATYNILIEVFGEGGYFKE 405
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G DK LE+ +EM ++GV + +YT ++N
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPD 271
+ G E + L M+ + + + YN I G D E L L EMR G++PD
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 246
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L++ + DEA+ V+ + + G P+ TT+ + +K +
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLG 306
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
E +PD + +L+E K IKEA GV ++
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 3/267 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G+ D A F M++ G + +++ L+ + R +KV L E+ +L PD S
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL-PDITS 319
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +LL+++ SGS +A+ + ++M+ G TY+ +LN + G ++ +L+ EM+
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 231 KKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
D D A YN+ I GG + + L +M + ++PD +Y ++ K + +
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A+K+ + + N P++ + I + +++A F V P T L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 350 EGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ +KE++ ++ R + P N
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRN 526
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 147/334 (44%), Gaps = 11/334 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DK L+++ + S S ++ + ++ R+ L++ KN+ KI+
Sbjct: 158 DKCLEVFDEMPSQGVS--RSVFSYTALINAYGRNGRYETSLELLDRMKNE-KISPSILTY 214
Query: 102 N-LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
N +I + + G+ ++ + F +M G ++++N LL AC L D+ ++F +
Sbjct: 215 NTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 274
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ PD +Y L+++ +K +LL EM + G +Y +L K G+
Sbjct: 275 DG-GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
+EA ++ +M+ G + Y+V + N +G G + +++L EM+ + PD +YN
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSV-LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNI 392
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF-DKAYKVFKESVMV 336
L+ + + E ++ + E P+ T+ I+ CG G + A K+ +
Sbjct: 393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGKGGLHEDARKILQYMTAN 451
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P ++E + +EA T+ +
Sbjct: 452 DIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHE 485
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 125/284 (44%), Gaps = 7/284 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L + ++ D+ + S + P IT L + +Y ++G AM F QM G
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL---LEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +++ LL +S YD V LF E+ K N PD +Y +L++ + G +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L ++M + +E TY ++ K G E+A ++ M + AY +
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY-TGVIE 465
Query: 248 TYGGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+G + L+ + M + G P +++ L+ + + ++ E++ + L ++G
Sbjct: 466 AFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPR 525
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
N TF I G F++A K + + PD T++ ++
Sbjct: 526 NRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 87/203 (42%), Gaps = 37/203 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I ++GQA +++ A+ F+ M E+G+ S+ +F++LL++ R
Sbjct: 463 VIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARG----------------- 505
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
GL+ +S +L+ + + G+ T+ + + G EEA
Sbjct: 506 ---------GLVKESEA----------ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + +MEK D D ++ ++ + +E +EM+ + + P + Y ++
Sbjct: 547 VKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAV 606
Query: 282 YCKNEMMDEAKKVYEGLEENGCS 304
Y K E D+ ++ E + N S
Sbjct: 607 YGKTERWDDVNELLEEMLSNRVS 629
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 175/400 (43%), Gaps = 50/400 (12%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF 78
SS+ + IS S + S D D A+ +++ + + +P + + + L L KSK +
Sbjct: 44 SSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILG--SLVKSKHY 101
Query: 79 SDIETL---IESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+ L +E P + CN LI + Q G+ A F ++ ++G I+
Sbjct: 102 HTVLYLSQKMEFRGIKPNLVN----CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157
Query: 135 FNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
F L C + ++ + LF + D+ISYG L+ C G + AL+LL
Sbjct: 158 FTTLSKGLCLKGQI--QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQR 215
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT------- 246
++ V+ V Y T+++ + K EA L+SEM KG+ DV Y+ I+
Sbjct: 216 VDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK 275
Query: 247 ---------------------------NTY--GGDPERLKELIDEMRDAGLKPDTISYNF 277
N + G + K + D M G+KP+ ++YN
Sbjct: 276 LKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
LM YC + +++AK ++ + + G +P+ ++ I C FD+A +FKE +
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
IPD T L++GL K +I A ++ + + PPN+
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 435
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 10/295 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+ F++M V +FN L+ A + + +FD + K+
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ- 324
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y L+ +C +KA + N M GV +Y+ ++N K +EA
Sbjct: 325 GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ EM +K + DV Y+ I + G +L+D+M D G+ P+ +YN ++
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDA 444
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +D+A + ++ G P+ +T+ I LC SG + A KVF++ ++ D
Sbjct: 445 LCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLD 504
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK--------KKFPPNVLRAWKKVEEELG 388
++++G + EA ++ ++ K + +L +KK E ++
Sbjct: 505 VYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMA 559
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 170/360 (47%), Gaps = 22/360 (6%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLT-VRRLAKSKRFSDI- 81
++I S K KL +E A D++S + SP Y+ ++ L K K D+
Sbjct: 229 NTIIDSMCKVKLVNE-----AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283
Query: 82 -ETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
+ ++E+ K D Y N L+ ++ + G FD M + G + +++N+L+
Sbjct: 284 NKMILENIKPDV------YTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337
Query: 140 FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
+ +K +F+ + + ++PD SY +++ C D+A+ L EM K +
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV---RITNTYGGDPERL 256
VTY+++++ L K G A +L +M +GV ++ YN + T+ D +
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVD--KA 454
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
L+ + +D G +PD +Y+ L+ C++ +++A+KV+E L G + + + I
Sbjct: 455 IALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQG 514
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
C G F++A + + IPD T ++++ L KK + A+ ++R I + P N
Sbjct: 515 FCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 41/247 (16%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA I++++++ +P Y+ + + K K+F + L + I
Sbjct: 347 NKAKSIFNTMAQGGVNPDIQSYS--IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-------------------- 141
+LI ++G +A++ DQM + G P ++ ++N++L A
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464
Query: 142 ----------------CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
C +L D + D + K YNL D +Y ++++ C G +
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNL--DVYAYTIMIQGFCVEGLFN 522
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA-AYNVR 244
+AL LL++ME+ G TY ++ L+K+ + AE+L EM +G+ L+ Y R
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFYDLYLTR 582
Query: 245 ITNTYGG 251
+ T+ G
Sbjct: 583 LAQTWHG 589
>gi|356514549|ref|XP_003525968.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Glycine max]
Length = 465
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 178/392 (45%), Gaps = 50/392 (12%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIY---SSVSKHYASPV-SSRYAQDLTVRRLAKSK 76
+T+ IS + S LRS DP AL ++ + P+ S + DL + +LA++K
Sbjct: 2 STSKPISPFRLTSLLRSTKDPSLALQLFLNPNPNPNPNPRPLRHSLRSYDLLITKLARAK 61
Query: 77 RFSDIETLIESHKNDPKI-TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
F +E ++ + + EP LC +I SY +A + A+RTF + ++ SF
Sbjct: 62 MFPQMEQILHQLQTLTQFPVPEPLLCRVIISYARARLPSRALRTFLSIPSFRCTPTLKSF 121
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD--KALELLNE 193
N+LL A R + +P L + PD +Y +L+++ C ++D A +L +E
Sbjct: 122 NSLLHALLLCRDFPSLPRLLPRLRHFSASGPDACTYNILIRA-CSLNNNDLAHARKLFDE 180
Query: 194 MENKGVEVTTVTYTTVLNCLYKQ------------------------------------- 216
M GV T VT+ T++N L K
Sbjct: 181 MLTLGVRPTQVTFGTLINMLCKDPHLNLREAFSVKEDMERVFKLKPNVFVYTNLIKAVCE 240
Query: 217 -GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTIS 274
G+ + A RL EM + + LDV YN + + + L +++EM+ G+KPD ++
Sbjct: 241 VGDFDCAFRLKDEMVRNNLRLDVVVYNTLTSAVFKAGKKGLGYRILEEMKSGGVKPDAVT 300
Query: 275 YNFLMTCYCKNEMMDEAKKVY-EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
N L+ +C+ + EA +V +G+E G P+ + I LC G + +A +F++
Sbjct: 301 CNVLIGEFCREGNLVEAYRVLDDGVE--GVKPDVFGYNVVIGWLCKEGKWREADDLFRDM 358
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+PD T + + +GL + + +EA V+
Sbjct: 359 PRRQCVPDVVTYRTVFDGLCQWMQFEEAGLVL 390
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 157/388 (40%), Gaps = 26/388 (6%)
Query: 7 IRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQD 66
+ +L T T + +S A+++L P +AL + S+ +P +
Sbjct: 70 LHQLQTLTQFPVPEPLLCRVIISYARARL-----PSRALRTFLSIPSFRCTPTLKSFNSL 124
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYG-QAGMFDHAMRTFDQ 122
L L + F + L+ ++ P C LIR+ HA + FD+
Sbjct: 125 LHALLLCRD--FPSLPRLLPRLRHFS--ASGPDACTYNILIRACSLNNNDLAHARKLFDE 180
Query: 123 MDELGTPRSVISFNALL-FACTRSRLYDKVPILFDE-IPKKYNLSPDKISYGLLLKSHCD 180
M LG + ++F L+ C L + E + + + L P+ Y L+K+ C+
Sbjct: 181 MLTLGVRPTQVTFGTLINMLCKDPHLNLREAFSVKEDMERVFKLKPNVFVYTNLIKAVCE 240
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G D A L +EM + + V Y T+ + ++K G R+ EM+ GV D
Sbjct: 241 VGDFDCAFRLKDEMVRNNLRLDVVVYNTLTSAVFKAGKKGLGYRILEEMKSGGVKPDAVT 300
Query: 241 YNVRITNTYGGDPERLKELIDEMRDA-----GLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
NV I G+ R L++ R G+KPD YN ++ CK EA ++
Sbjct: 301 CNVLI-----GEFCREGNLVEAYRVLDDGVEGVKPDVFGYNVVIGWLCKEGKWREADDLF 355
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+ C P+ T+RT LC F++A V +E V +P +++ V L ++
Sbjct: 356 RDMPRRQCVPDVVTYRTVFDGLCQWMQFEEAGLVLEEMVFKGYVPCSSSLNEFVGRLCQE 415
Query: 356 KKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
+ V+ + F N WK V
Sbjct: 416 GDFELLGKVLSGLGGGFFCNE-NVWKTV 442
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 147/306 (48%), Gaps = 37/306 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIRS+G GM + + + +M E G S+ +FN LL S + +F E+ +
Sbjct: 195 SLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVF-EVMEC 253
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +SY ++K +C +G++ KA+E +ME + +E +TY T++ Y +GN +
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDS 313
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI----------------------------------TN 247
L+ EME++G+++ AY++ I +
Sbjct: 314 CLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALID 373
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YG G+ L + M+ G +PD ++Y ++ CK+ +DEA + +E ++N +
Sbjct: 374 AYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAV 433
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
NA + + I L +G D+A K F+E V D L++ L K K++EA +
Sbjct: 434 NAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLF 493
Query: 366 RTIKKK 371
+ ++K+
Sbjct: 494 KRMEKE 499
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 5/251 (1%)
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
F+ M++ G +V + AL+ A ++ ++ LF+ + K PD ++YG+++
Sbjct: 352 VFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERM-KGEGFEPDDVTYGVIVNGL 410
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C SG D+A+E ++ V V + Y+++++ L K G +EAE+ + EM ++G D
Sbjct: 411 CKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDS 470
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN I G E L M G +Y L++ K +EA K+++
Sbjct: 471 YCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDL 530
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF---NTVKLLVEGLVK 354
+ + G +P +FR LC SG +A K+ E + IP+ + + +L +
Sbjct: 531 MIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAGRT 590
Query: 355 KKKIKEAKGVI 365
++ K A G++
Sbjct: 591 EQACKLADGIV 601
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A++++ + P Y + V L KS R + E K++ +
Sbjct: 382 NEAINLFERMKGEGFEPDDVTYG--VIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYS 439
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G+AG D A + F++M E G P+ +NAL+ A +S
Sbjct: 440 SLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKS---------------- 483
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
G ++AL L ME +G + T TYT +++ L+K+ EE
Sbjct: 484 --------------------GKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEE 523
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +LW M KG+ A++ + + G R +++DE+ G+ P+T ++ ++
Sbjct: 524 ALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMIN 582
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
CK ++A K+ +G+ + G I L +GN D A K+ + +
Sbjct: 583 VLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGI 638
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 113/295 (38%), Gaps = 37/295 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I+ Y +AG AM F M++ I++ L+ AC +D L+ E+ ++
Sbjct: 266 MIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEER- 324
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L +Y L++ C G + + + M KG + YT +++ K GN EA
Sbjct: 325 GLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEA 384
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--------------------------------- 249
L+ M+ +G + D Y V +
Sbjct: 385 INLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDG 444
Query: 250 ---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + ++ +EM + G D+ YN L+ K+ M+EA +++ +E+ GC
Sbjct: 445 LGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQT 504
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ I L ++A K++ + P + + L GL K+ A
Sbjct: 505 VYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARA 559
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
S D+ + E + KG +T +++ G EE +W M++ G++ +
Sbjct: 168 SSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYT 227
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAG-LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+N + E + E+ + G + PD +SYN ++ YCK +A + + +E
Sbjct: 228 FNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDME 287
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-SVMVHKIPDFNTVKLLVEGLVKKKKI 358
+ P+ T+ T I GNFD +++E +IP + L++ GL K +
Sbjct: 288 KRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPP-HAYSLVIGGLCKDGRT 346
Query: 359 KEAKGVIRTIKKK 371
E V + KK
Sbjct: 347 VEGSSVFENMNKK 359
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 11/311 (3%)
Query: 72 LAKSKRFSDIETLIESHK--NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
L K + D +L+E K N + Y C LI + +AG FD A F QM+E G
Sbjct: 367 LCKVGKEEDGLSLLEEMKMGNINRPNTVTYNC-LIDGFFKAGNFDRAHELFRQMNEEGVQ 425
Query: 130 RSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+VI+ N L+ C R++ V F+E+ K L + +Y L+ + C + ++A+
Sbjct: 426 PNVITLNTLVDGLCKHGRVHRAVE-FFNEMKGK-GLKGNAATYTALISAFCGVNNINRAM 483
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ EM + G V Y ++++ L G +A + S+++ G LD + YNV I+
Sbjct: 484 QCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGF 543
Query: 249 YGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
ER+ EL+ EM + G+KPDTI+YN L++ K A KV E + + G P+
Sbjct: 544 CKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSV 603
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVI 365
T+ I+ C N D+ K+F E K+P NTV +L++ L + + A ++
Sbjct: 604 VTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPP-NTVIYNILIDALCRNNDVDRAISLM 662
Query: 366 RTIK-KKFPPN 375
+K K+ PN
Sbjct: 663 EDMKVKRVRPN 673
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 7/267 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI ++ + AM+ F++M G +P +V+ ++ + C R+ D ++ ++ K
Sbjct: 469 LISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMND-ASVVVSKL-KL 526
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
S D+ Y +L+ C ++ ELL EME GV+ T+TY T+++ L K G+
Sbjct: 527 AGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFAT 586
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP---ERLKELIDEMRDAGLKPDTISYNFL 278
A ++ +M K+G+ V Y I + Y E +K + + + P+T+ YN L
Sbjct: 587 ASKVMEKMIKEGLRPSVVTYGA-IIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+N +D A + E ++ PN TT+ + + KA+++ V
Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEAC 705
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD+ T+++L E L +I++ K +
Sbjct: 706 RPDYITMEVLTEWLSAVGEIEKLKHFV 732
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 144/364 (39%), Gaps = 82/364 (22%)
Query: 52 SKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQA 110
S H P++ + A L ++ L ++ +D +L+ ++ DP ++ P LC+ L+R ++
Sbjct: 132 STHPTLPLTPKSAS-LLLQCLENARLVND--SLLLFNQLDPS-SKSPQLCHGLLRVLLKS 187
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G A+ D+M + + SV I+F E+ + PD
Sbjct: 188 GRAGDALHVLDEMPQANSGFSVTG-----------------EIVFGELVRSGRSFPDGEV 230
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
GL+ K + G +L + + VL+C+ + G A
Sbjct: 231 VGLVAKLG-ERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGA----------- 278
Query: 231 KKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+D A+ N +T G D +R+ EL+ EM ++P +++ L+ CK +D
Sbjct: 279 -----VDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRID 333
Query: 290 EAKKVYE------------------------------GLEENGCS------------PNA 307
EA +V++ G EE+G S PN
Sbjct: 334 EALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNT 393
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I +GNFD+A+++F++ P+ T+ LV+GL K ++ A
Sbjct: 394 VTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNE 453
Query: 368 IKKK 371
+K K
Sbjct: 454 MKGK 457
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G+ G F A + ++M + G SV+++ A++ A + D+ +F E+
Sbjct: 574 LISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTS 633
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ + Y +L+ + C + D+A+ L+ +M+ K V T TY +L + + +A
Sbjct: 634 KVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDA 266
L M ++ D V +T G+ E+LK ++ +D+
Sbjct: 694 FELMDRMVEEACRPDYITMEV-LTEWLSAVGEIEKLKHFVEGYQDS 738
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + + +M+E G I++N L+ ++ + + +++ K+
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKE- 597
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P ++YG ++ ++C + D+ +++ EM V TV Y +++ L + + +
Sbjct: 598 GLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDR 657
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFL 278
A L +M+ K V + YN + D + L EL+D M + +PD I+ L
Sbjct: 658 AISLMEDMKVKRVRPNTTTYNAILKGVR--DKKMLHKAFELMDRMVEEACRPDYITMEVL 715
Query: 279 MTCYCKNEMMDEAKKVYEGLEEN 301
+++ K EG +++
Sbjct: 716 TEWLSAVGEIEKLKHFVEGYQDS 738
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 154/308 (50%), Gaps = 11/308 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDE 125
V L +++R D E +I + + ++ P LI + +A + A+ QM E
Sbjct: 154 VSALVRTRRLDDAERVIAAMR---RLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQE 210
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
+G V F L+ A R + L DE+ K L PD + Y + + +G+ D
Sbjct: 211 VGYEVGVPLFTTLVRALAREGRVEGALALVDEV-KGSCLEPDIVLYNVCIDCFGKAGNVD 269
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A + +E++++G++ V+YT+++ L K G EAE L+ +ME + AYN I
Sbjct: 270 MAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMI 329
Query: 246 TNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
YG G E +L+D++++ G P +S+N ++TC K +DEA ++E ++++
Sbjct: 330 MG-YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA- 387
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN++T+ I LC +G ++AY + E P+ TV ++V+ L K KK + A
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447
Query: 364 VIRTIKKK 371
+ T ++
Sbjct: 448 MFETASQR 455
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 157/344 (45%), Gaps = 7/344 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A + + P Y + V L K+ R S+ E L + + +
Sbjct: 269 DMAWKFFHELKSQGLKPDDVSYTSMIWV--LCKAGRLSEAEELFGQMETERAVPCAYAYN 326
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I YG AG F++A + DQ+ E G SV+SFN++L + R D+ LF+ + K
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK- 385
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +Y +++ C +G ++A + +EME+ G+ +T +++ L K E
Sbjct: 386 -DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEP 444
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A ++ ++G + + Y + + G G+ + L + M D G + + Y L+
Sbjct: 445 AYEMFETASQRGCNPNSVTY-CSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLI 503
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + ++ K+++ + GC P+ T T++ + +G+ +K +F++ +
Sbjct: 504 RNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFL 563
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
PD + +L+ GL K + +E + +K++ RA+ V
Sbjct: 564 PDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAV 607
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 45/370 (12%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE 97
+F+P A +++ + S+ +P S Y + L K D L E+ +
Sbjct: 441 KFEP--AYEMFETASQRGCNPNSVTYCS--LIDGLGKKGNVDDAYRLFENMLDTGHNANP 496
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+LIR++ G + + F +M+ G + N + ++ +K +F++
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556
Query: 158 IPKKYNLSPDKISYGLLLKS-----------------------------------HCDSG 182
I K Y PD SY +L+ C SG
Sbjct: 557 I-KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSG 615
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
DKA E+L EM+ K V T TY ++++ L K +EA L+ E + KG++L+V Y+
Sbjct: 616 KLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYS 675
Query: 243 VRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
I G R+ E +++EM GL P+ ++N LM K E ++EA ++ ++
Sbjct: 676 SLIDGF--GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMK 733
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
E CSPN T+ I LC ++KA+ ++E +P+ T ++ GL K I
Sbjct: 734 EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNIT 793
Query: 360 EAKGVIRTIK 369
+A + K
Sbjct: 794 DACSLFERFK 803
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 137/301 (45%), Gaps = 3/301 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K ++ + TL E+ K D + Y +I AG + A D+M+ G +
Sbjct: 367 LGKKRKVDEALTLFEAMKKDAEPNSSTYNI-IIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+++ N ++ +++ ++ +F E + +P+ ++Y L+ G+ D A L
Sbjct: 426 LLTVNIMVDRLCKAKKFEPAYEMF-ETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLF 484
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
M + G V YT+++ + G E+ +++ EM ++G D+ N + +
Sbjct: 485 ENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKA 544
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
GD E+ + + ++++ G PD SY+ L+ K E ++ +++ G + +A +
Sbjct: 545 GDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAY 604
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ C SG DKAY+V +E + P T +++GL K ++ EA + K
Sbjct: 605 NAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 664
Query: 371 K 371
K
Sbjct: 665 K 665
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 10/263 (3%)
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ ++M LG + L+ A R+R D + + ++ P +Y +L+ +
Sbjct: 133 KVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAM-RRLKFRPAFSAYTVLIGA 191
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
++ ++ALELL +M+ G EV +TT++ L ++G E A L E++ ++ D
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251
Query: 238 VAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ YNV I + +G G+ + + E++ GLKPD +SY ++ CK + EA++++
Sbjct: 252 IVLYNVCI-DCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELF 310
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---FKESVMVHKIPDFNTVKLLVEGL 352
+E P A + T I +G F+ AYK+ KE + + FN++ + L
Sbjct: 311 GQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSI---LTCL 367
Query: 353 VKKKKIKEAKGVIRTIKKKFPPN 375
KK+K+ EA + +KK PN
Sbjct: 368 GKKRKVDEALTLFEAMKKDAEPN 390
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 9/315 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ V RL K+K+F + E+ C+LI G+ G D A R F+ M +
Sbjct: 430 NIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLD 489
Query: 126 LGTPRSVISFNALL---FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
G + + + +L+ F R K+ F E+ ++ PD + +G
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGRKEDGHKI---FKEMNRR-GCQPDLTLLNTYMDCVFKAG 545
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+K + +++ G +Y+ +++ L K G A E ++ M+++G LD AYN
Sbjct: 546 DVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYN 605
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G ++ E+++EM+ + P +Y ++ K + +DEA ++E +
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK 665
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G N + + I G D+AY + +E + P+ T L++ LVK ++I EA
Sbjct: 666 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEA 725
Query: 362 KGVIRTIKK-KFPPN 375
+++K+ K PN
Sbjct: 726 LICFQSMKEMKCSPN 740
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 114/261 (43%), Gaps = 6/261 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA ++ + P + Y + LAK R + L E K+
Sbjct: 618 DKAYEVLEEMKVKRVPPTVATYGS--IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYS 675
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +G+ G D A ++M + G +V ++N+L+ A ++ ++ I F + K+
Sbjct: 676 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM-KE 734
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ +Y +L+ C +KA EM+ +G+ VTYTT++ L K GN +
Sbjct: 735 MKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITD 794
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ + G D A++N I ++ + +E R G + + + L+
Sbjct: 795 ACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLD 854
Query: 281 CYCKNEMMDEAKKVYEGLEEN 301
K E +++A V G EN
Sbjct: 855 ALNKAECLEQAAVV--GFGEN 873
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 2/206 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + D A F++ G +VI +++L+ + D+ ++ +E+ KK
Sbjct: 641 SIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKK 700
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+P+ ++ L+ + + ++AL M+ T TY+ ++N L + +
Sbjct: 701 -GLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNK 759
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A W EM+K+G+ +V Y I G+ L + + G PD S+N L+
Sbjct: 760 AFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIE 819
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPN 306
EA V+E GC N
Sbjct: 820 GMSHANRAIEAYHVFEETRLKGCRIN 845
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 148/335 (44%), Gaps = 37/335 (11%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + L KS + D E ++ N + LI + + G A + FD+
Sbjct: 46 YTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDE 105
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M++ I++ A++ R + +F+++ + + PD+++Y L+ +C SG
Sbjct: 106 MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSR-GVEPDEVTYTTLIDGYCKSG 164
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+KA L N+M G+ VTYT + + L K G + A L EM KG+ L++ YN
Sbjct: 165 EMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYN 224
Query: 243 ---------------------VRITNTY---------------GGDPERLKELIDEMRDA 266
+ + Y G+ + EL+ EM D
Sbjct: 225 SLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
GL+P I++N LM +C + M+++ +++ + E G PN TT+ + + C N
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCT 344
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+++K +PD NT +L++G K + +KEA
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEA 379
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
+PD +SY ++ +C G K L+L+ EM+ KG++ TY +++ L K G ++AER
Sbjct: 7 APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+ EM +G+ D Y I G+ + +L DEM + PD I+Y ++ C
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ M EA KV+ + G P+ T+ T I C SG +KA+ + + V P+
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L +GL K ++ A ++ + K
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGK 214
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G V+S++ ++ KV L E+ K L P+ +Y ++ C SG D
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMK-GLKPNLYTYNSIILLLCKSGKVDD 63
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A +L EM N+G+ TV YTT+++ K GN + A +L+ EMEK+ + D AY I
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G ++ ++M G++PD ++Y L+ YCK+ M++A ++ + ++G +P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN--TVKLLVEGLVKKKKIKEA 361
N T+ LC G D A ++ E M K N T LV GL K I++A
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHE--MCGKGLQLNICTYNSLVNGLCKSGNIRQA 239
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL-LFACTRSRLYDKVPILFDEIPKK 161
+I Y G ++ +M G ++ ++N++ L C ++ D +L + I +
Sbjct: 16 VINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQ- 74
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD + Y L+ C G+ A +L +EME + + + YT V+ L + G E
Sbjct: 75 -GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMME 133
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++++++M +GV+ D Y I G+ E+ L ++M +GL P+ ++Y L
Sbjct: 134 ADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALAD 193
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D A ++ + G N T+ + + LC SGN +A K+ +E + P
Sbjct: 194 GLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYP 253
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
D T L++ K ++ +A ++R + + P V+
Sbjct: 254 DTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI 291
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y ++G + A +QM + G +V+++ AL + D L E+ K
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGK- 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + +Y L+ C SG+ +A++L+ EME G+ T+T+TT+++ K G +A
Sbjct: 215 GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKA 274
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM +G+ V +NV + G E + L+ M + G+ P+T +YN LM
Sbjct: 275 HELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQ 334
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
YC M ++Y+G+ G P++ T+ I C + N +A+ + KE
Sbjct: 335 YCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 385
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
++G D A R +M G + + L+ + LFDE+ K+ + PD
Sbjct: 57 KSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDF 115
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
I+Y ++ C G +A ++ N+M ++GVE VTYTT+++ K G E+A L ++
Sbjct: 116 IAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQ 175
Query: 229 MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M + G+ +V Y G + EL+ EM GL+ + +YN L+ CK+
Sbjct: 176 MVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGN 235
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ +A K+ E +E G P+ TF T + C +G KA+++ +E + P T +
Sbjct: 236 IRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295
Query: 348 LVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
L+ G +++ + ++ ++K PN
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Query: 229 MEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
M+ +G DV +Y+ I N Y GG+ +++ +LI EM+ GLKP+ +YN ++ CK+
Sbjct: 1 MKFRGDAPDVVSYSTVI-NGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSG 59
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+D+A++V + G P+ + T I C GN AYK+F E +PDF
Sbjct: 60 KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119
Query: 347 LLVEGLVKKKKIKEAKGVI 365
++ GL + K+ EA V
Sbjct: 120 AVICGLCRCGKMMEADKVF 138
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 37/260 (14%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A +M G ++ ++N+L+ +S + L +E+ + PD I+
Sbjct: 199 GQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVA-GMYPDTIT 257
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ L+ ++C +G KA ELL EM ++G++ T +T+ ++N G E+ ERL + M
Sbjct: 258 FTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWML 317
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+KG+ + YN + + R E+ M G+ PD+ +YN L+ +CK M
Sbjct: 318 EKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMK 377
Query: 290 EAKKVYEGLEENGCSPNATTFRTW------------------------------IYHLC- 318
EA +++ + E G + A+++ + IY+L
Sbjct: 378 EAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV 437
Query: 319 ----GSGNFDKAYKVFKESV 334
G GN + A ++ E++
Sbjct: 438 DISYGEGNMETALELCDEAI 457
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 2/186 (1%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNTYGGD 252
M+ +G V+Y+TV+N G ++ +L EM+ KG+ ++ YN + + G
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ + ++ EM + G+ PDT+ Y L+ +CK + A K+++ +E+ P+ +
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKK 371
I LC G +A KVF + PD T L++G K ++++A + + ++
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 372 FPPNVL 377
PNV+
Sbjct: 181 LTPNVV 186
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 4/162 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + +GM + R M E G + ++N+L+ C R+ + I +
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCAR- 354
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y +L+K HC + + +A L EM KG +T +Y +++ +K+ E
Sbjct: 355 -GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISE 413
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDE 262
A L+ EM ++G+ D YN+ + +YG G+ E EL DE
Sbjct: 414 ARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDE 455
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 4/179 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ +Y + G A +M + G +VI+FN L+ C L D +L + K
Sbjct: 261 LMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEK- 319
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +Y L+K +C + E+ M +GV + TY ++ K N +E
Sbjct: 320 -GIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKE 378
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A L EM +KG +L ++YN + +EL +EMR G+ D YN +
Sbjct: 379 AWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFV 437
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 10/330 (3%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEPYLCN--LIRSYGQA 110
+SP SS DL V+ L++ TL+ H P + + + L RS
Sbjct: 126 SSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNH 185
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
+D A R F M G +V ++N ++ +K + F +K +SP+ ++
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEK-GLGFMRKMEKEGISPNVVT 244
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ + C +A+ LL M GV ++Y +V+N L +G E L EM
Sbjct: 245 YNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR 304
Query: 231 KKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
KG+ D YN + N + G+ + L+ EM GL P+ ++Y L+ C CK +
Sbjct: 305 GKGLVPDEVTYNT-LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
A ++++ + G PN T+ T I C G ++AYKV E ++ P T L
Sbjct: 364 SRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423
Query: 349 VEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
V G +++EA G++R +++ PP+V+
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVV 453
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 133/263 (50%), Gaps = 5/263 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
AM M G ++IS+N+++ C + R+ +V L +E+ K L PD+++Y L
Sbjct: 261 AMALLRAMAVGGVAANLISYNSVINGLCGKGRM-SEVGELVEEMRGK-GLVPDEVTYNTL 318
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C G+ + L LL+EM KG+ VTYTT++NC+ K GN A ++ +M +G+
Sbjct: 319 VNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGL 378
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+ Y I G +++ EM +G P ++YN L+ YC + EA
Sbjct: 379 RPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVG 438
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ G+ E G P+ ++ T I C KA+++ +E V +PD T L++GL
Sbjct: 439 ILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLC 498
Query: 354 KKKKIKEAKGVIR-TIKKKFPPN 375
++K+ EA + R +++ PP+
Sbjct: 499 LQQKLVEAFDLFREMMRRGLPPD 521
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 8/302 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+ L R S++ L+E + + E L+ + + G + +M G
Sbjct: 283 VINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKG 342
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+V+++ L+ ++ + +FD++ + L P++ +Y L+ C G ++A
Sbjct: 343 LSPNVVTYTTLINCMCKAGNLSRAVEIFDQM-RVRGLRPNERTYTTLIDGFCQKGLMNEA 401
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++L+EM G + VTY +++ G +EA + M ++G+ DV +Y+ I
Sbjct: 402 YKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG 461
Query: 248 TYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G ++KE EM + G+ PDT++Y+ L+ C + + EA ++ + G
Sbjct: 462 FCRERELGKAFQMKE---EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ + I C G KA ++ E V +PD T +L+ GL KK + K AK
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578
Query: 364 VI 365
++
Sbjct: 579 LL 580
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A + ++M E G +++++L+ C + +L + LF E+ ++ L PD+++Y L
Sbjct: 471 AFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD-LFREMMRR-GLPPDEVTYTSL 528
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ ++C G KAL L +EM +G VTY+ ++N L K+ + A+RL ++ +
Sbjct: 529 INAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEES 588
Query: 235 DLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D YN I N + + ++ L+ +C +M+EA +V
Sbjct: 589 VPDDVTYNTLIENCSNNEFKSVEGLVKG-------------------FCMKGLMNEADRV 629
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE----SVMVHKIPDFNTVKLLV- 349
++ + + PNA + I+ GN KAY ++ E S H + VK L
Sbjct: 630 FKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAR 689
Query: 350 EGL 352
EG+
Sbjct: 690 EGM 692
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 159/338 (47%), Gaps = 15/338 (4%)
Query: 35 LRSEFDPDKAL---DIYSSVSKHYASPVSSRYAQDLTVRRLAKSK--RFSDIETLIESHK 89
++SE DP AL D+ S Y P + +RRLA S R + ++ +
Sbjct: 21 MKSEPDPATALAHLDLLVSTWPAYTPPQPLLFH---LLRRLATSSPSRLPRLLGILPRLR 77
Query: 90 NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLY 148
+ P+ ++ L ++ ++ +A M D A+ F ++ LG V S NALL A R+R +
Sbjct: 78 HRPRFSESAALV-VLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRF 136
Query: 149 DKVPILFDEIPKKY---NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
F + ++P+ +Y ++L+S C G D+A+ L + + +G+ +T
Sbjct: 137 SDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRIT 196
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM- 263
Y+T+++ K + A L EM V D YN + + G+ E+ + +++
Sbjct: 197 YSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLV 256
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
RD G P+ +YN ++ CK M EA V+E + N P+ T+ T I+ LC S +
Sbjct: 257 RDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDV 316
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
D A +V+ E + +PD L++G ++ EA
Sbjct: 317 DSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 35/270 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L++ + AG A + +D M G R+V S+N +L + DK L++ + K
Sbjct: 340 SLLKGFCHAGRVGEAWKFWDSMSVSGI-RNVTSYNIMLKGLFDGGMVDKATDLWELLEKD 398
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+LSPD +++ ++ C+ G ++K+L++L E G E+ +Y+++++ L K G ++
Sbjct: 399 DSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDD 458
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A +L+ EK +D KP++ YN L+
Sbjct: 459 AVKLY---EKISMD-------------------------------SFKPNSHIYNALING 484
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+ +A +VY + EN CSP T+ T I+ LC + + +A + +E + + D
Sbjct: 485 FCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLD 544
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
NT L+ GL + KKI A + I K
Sbjct: 545 VNTYGSLIRGLCRDKKIDGALALWNQILDK 574
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 134/276 (48%), Gaps = 4/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + D+A+ D+M + +NALL C R+ ++K +++++ +
Sbjct: 200 LMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDP 259
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ +Y ++L C G +A ++ M + +TY T+++ L + + + A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R++SEM K G+ DV YN + + G + D M +G++ + SYN ++
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKG 378
Query: 282 YCKNEMMDEAKKVYEGLE-ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
M+D+A ++E LE ++ SP+ TF T I+ LC G +K+ ++ +E+ K
Sbjct: 379 LFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKEL 438
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPN 375
D + ++ GL K ++ +A + I F PN
Sbjct: 439 DEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPN 474
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 130/281 (46%), Gaps = 9/281 (3%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ--MDELGTPRSVISFNALLFA 141
++E + K E ++I + G D A++ +++ MD P S I +NAL+
Sbjct: 427 ILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSF-KPNSHI-YNALING 484
Query: 142 -CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
C S+ D + + + ++ + + SP I+Y L+ C + +A EM KG
Sbjct: 485 FCQASKFSDAIRV-YSQMAEN-DCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCM 542
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
+ TY +++ L + + A LW+++ KG+ DV +N+ I G + +L
Sbjct: 543 LDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQL 602
Query: 260 IDEMRDAG-LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+ EM++ P+ ++YN LM + + D+A ++ + ENG P+ ++ T I LC
Sbjct: 603 LSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLC 662
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ ++ E + IP T +LV ++K I+
Sbjct: 663 SCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 32/309 (10%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
+D+ L+E K+D +I + G + +++ ++ G S++++
Sbjct: 389 TDLWELLE--KDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSM 446
Query: 139 LFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+ C RL D V L+++I + P+ Y L+ C + A+ + ++M
Sbjct: 447 ISGLCKDGRLDDAVK-LYEKISMD-SFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEN 504
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL- 256
TT+TY T+++ L K EA R EM +KG LDV NTYG L
Sbjct: 505 DCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDV--------NTYGSLIRGLC 556
Query: 257 --------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE-NGCSPNA 307
L +++ D GL+ D + +N L+ C +DEA ++ ++E N C PN
Sbjct: 557 RDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNV 616
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE------- 360
T+ T + +G FDKA ++ + +PD + ++GL + E
Sbjct: 617 VTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNE 676
Query: 361 --AKGVIRT 367
A G+I T
Sbjct: 677 MLASGIIPT 685
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 237 DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
++ YN+ + + GD +R L D +R GL PD I+Y+ LM+ + KN +D A +
Sbjct: 158 NLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLL 217
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM-VHKIPDFNTVKLLVEGLVK 354
+ + P+A + + +G F+KA +V+++ V P+ T ++++GL K
Sbjct: 218 DEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCK 277
Query: 355 KKKIKEAKGVI-RTIKKKFPPNVL 377
KEA V R + P+++
Sbjct: 278 LGMFKEAGDVWERMVANNHQPDMI 301
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 4/209 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
A+ +YS ++++ SP + Y + + L K++++ + + +L
Sbjct: 494 AIRVYSQMAENDCSPTTITY--NTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSL 551
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
IR + D A+ ++Q+ + G V+ N L+ + D+ L E+ +K N
Sbjct: 552 IRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNN 611
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
P+ ++Y L+ ++G DKA L + G+ ++Y T + L E
Sbjct: 612 CCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGV 671
Query: 224 RLWSEMEKKGVDLDVAAYN--VRITNTYG 250
+L +EM G+ +N VR YG
Sbjct: 672 QLLNEMLASGIIPTAITWNILVRAVIKYG 700
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 136/249 (54%), Gaps = 6/249 (2%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G +FN L+ A S D LFDE+P+K P++ ++G+L++ +C +G +DK
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYCKAGLTDK 200
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
LELLN ME+ GV V Y T+++ ++G +++E+L +M ++G+ D+ +N RI+
Sbjct: 201 GLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRIS 260
Query: 247 NTYGG----DPERLKELIDEMRDAGL-KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
D R+ ++ GL +P++I+YN ++ +CK ++++AK ++E + EN
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ ++ W+ L G F +A V K+ + P + +L++GL K + +A
Sbjct: 321 DDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 362 KGVIRTIKK 370
K ++ +K+
Sbjct: 381 KTIVGLMKR 389
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 153/358 (42%), Gaps = 40/358 (11%)
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPY---LCNLIRS 106
+ ++ P + +L ++ K D +TL ES +ND ++ + Y L L+R
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRH 339
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLS 165
G F A QM + G S+ S+N L+ C L D I+ + K+ +S
Sbjct: 340 ----GKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV--GLMKRNGVS 393
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++YG LL +C G D A LL EM T +L+ L+ G EAE L
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEEL 453
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAG----------------- 267
+M +KG LD N+ + G G+ ++ E++ MR G
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 268 ------LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
PD I+Y+ L+ CK EAK ++ + P++ + +I+H C G
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQG 573
Query: 322 NFDKAYKVFK--ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
A++V K E HK T L+ GL K +I E G++ +++K PN+
Sbjct: 574 KISSAFRVLKDMEKKGCHK--SLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNI 629
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 42/319 (13%)
Query: 94 ITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
I+ E Y NL IR+ + D A FD+M E G + +F L+ ++ L DK
Sbjct: 143 ISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L + + + + + P+K+ Y ++ S C G +D + +L+ +M +G+ VT+ + ++
Sbjct: 203 ELLNSM-ESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261
Query: 213 LYKQGNAEEAERLWSEME-----------------------KKGVDLD------------ 237
L K+G +A R++S+ME K G+ D
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 238 ----VAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ +YN+ + G + ++ +M D G+ P SYN LM CK M+ +AK
Sbjct: 322 DLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ ++ NG SP+A T+ ++ C G D A + +E + + +P+ T +L+ L
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 353 VKKKKIKEAKGVIRTIKKK 371
+I EA+ ++R + +K
Sbjct: 442 WNMGRISEAEELLRKMNEK 460
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 126/284 (44%), Gaps = 18/284 (6%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L NL SY G+ D D + E +I+++ LL ++ + + LF E+
Sbjct: 500 LGNLGNSY--IGLVD------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMM 551
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ L PD ++Y + + C G A +L +ME KG + TY +++ L +
Sbjct: 552 GE-KLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E L EM +KG+ ++ YN I GG E L+DEM + P+ S+ +L
Sbjct: 611 FEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK D A++V+E + C + L +G KA ++ E+V+
Sbjct: 671 IGAFCKVPDFDMAQEVFE-TAVSICGQKEGLYSLMFNELLAAGQLLKATELL-EAVLDRG 728
Query: 339 IPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIKKK---FPPNVL 377
+ T K LV L KK +++ A G++ + K F P L
Sbjct: 729 F-ELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAAL 771
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
E + L +M G+ P+T ++N L+ C + +D A+++++ + E GC PN TF
Sbjct: 129 EFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGIL 188
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPD---FNTV 345
+ C +G DK ++ +P+ +NT+
Sbjct: 189 VRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTI 223
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 43/218 (19%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T YLC + G + A D+M + +V SF L+ A + +D +
Sbjct: 634 TAIQYLC-------EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEV 686
Query: 155 FDE----IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
F+ +K L Y L+ +G KA ELL + ++G E+ T Y ++
Sbjct: 687 FETAVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLV 740
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKP 270
L K+ E A + +M KG YG DP L +ID + G K
Sbjct: 741 VSLCKKDELEVASGILHKMIDKG---------------YGFDPAALMPVIDGLGKMGNKK 785
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+ ++ +MM+ A G N PNAT
Sbjct: 786 EANNF--------AEKMMEMASV---GEVANKVDPNAT 812
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 9/346 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKH--YASPVSSRYAQDLTVRRLAKSKRFSDIE-TLIESHKND 91
+R + DP KAL++++S+ K + +S+ + + +L +F +E L++ +N
Sbjct: 14 IRCQKDPMKALEMFNSMRKEDGFKHTLSTYRS---IIEKLGLYGKFEAMEEVLVDMRQNV 70
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
E +++YG+ G A+ F++MD +V S+NA++ S +D+
Sbjct: 71 GNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQA 130
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
++ + + ++PD S+ + +KS C + AL LLN M ++G E+ V Y TV+
Sbjct: 131 HKVYMRMRDR-GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKP 270
Y++ +E L+ +M GV L ++ +N + GD + ++L+D++ G+ P
Sbjct: 190 GFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ +YNF + C+ +D A ++ L + G P+ T+ IY LC + F +A
Sbjct: 250 NLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYL 309
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPN 375
+ V PD T L+ G K ++ A+ + + + F P+
Sbjct: 310 GKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPD 355
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 136/340 (40%), Gaps = 70/340 (20%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
I+ Q G D A+R ++ + G V+++N L++ ++ + + + ++ +
Sbjct: 257 FIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316
Query: 162 -------YN--------------------------LSPDKISYGLLLKSHCDSGSSDKAL 188
YN PD+ +Y L+ C G +++AL
Sbjct: 317 LEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRAL 376
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN------ 242
L NE KG++ + Y T++ L QG EA +L SEM +KG+ +V +N
Sbjct: 377 ALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGL 436
Query: 243 --------------VRITNTYGGD----------------PERLKELIDEMRDAGLKPDT 272
V I+ Y D E E++D M D G+ PD
Sbjct: 437 CKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDV 496
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ CK ++ + Y+ + E GC+PN TF + LC DKA + +E
Sbjct: 497 YTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEE 556
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
PD T L++G K + A + R +++ +
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 43/312 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ G+ A + +M E G V +FN L+ C + D ++ I K
Sbjct: 397 LIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ +L+ + + ALE+L+ M + GV+ TY ++LN L K E+
Sbjct: 457 Y--FPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ M +KG ++ +N+ + + Y + L L++EM++ + PD +++ L+
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALG-LLEEMKNKSVNPDAVTFGTLI 573
Query: 280 TCYCKNEMMDEAKKVYEGLEEN---GCS-------------------------------- 304
+CKN +D A ++ +EE CS
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 305 -PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+R + C +GN D YK E + IP T+ ++ L + ++ EA G
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 364 VI-RTIKKKFPP 374
+I R ++K P
Sbjct: 694 IIHRMVQKGLVP 705
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 131/257 (50%), Gaps = 10/257 (3%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G V +FN+L+ +R + LF+E+ K PD+ +Y +L+ S C G D+
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL +L +ME G + +TY T+++ K EAE ++ EME GV + YN I
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 247 NTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E +L+D+M G KPD +YN L+T +C+ + +A + + + NGC P
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVM--VHKIPD-FNTVKLLVEGLVKKKKIKEAK 362
+ T+ T I LC +G + A K+ + M ++ P +N V ++GL +K+K EA
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV---IQGLFRKRKTTEAI 630
Query: 363 GVIRTI--KKKFPPNVL 377
+ R + + + PP+ +
Sbjct: 631 NLFREMLEQNEAPPDAV 647
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 178/432 (41%), Gaps = 78/432 (18%)
Query: 12 TATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKH-YASPVSSRYAQDLTVR 70
T + A+ S SS V K LRS+ D AL +++ SK SP + Y + L
Sbjct: 35 TISFASPHSAALSSTDV-KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILL-- 91
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGT- 128
RL +S F D++ ++E K+ LI SY Q + D + D M DE G
Sbjct: 92 RLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLK 151
Query: 129 PRS----------------------------------VISFNALLFACTRSRLYDKVPIL 154
P + V +FN L+ A R+ ++
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 155 FDEIPKKYNLSPDK-----------------------------------ISYGLLLKSHC 179
+++P Y L PD+ +S +++ C
Sbjct: 212 LEDMPS-YGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 180 DSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
G + AL + EM N+ G T+ T++N L K G+ + A + M ++G D DV
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 239 AAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN I+ G+ + E++D+M P+T++YN L++ CK ++EA ++
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L G P+ TF + I LC + N A ++F+E PD T +L++ L K K
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 358 IKEAKGVIRTIK 369
+ EA +++ ++
Sbjct: 451 LDEALNMLKQME 462
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 3/302 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ ++ L ++ + ++E + + E +++ Y + G D A+R +QM E
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVE 252
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G S +S N ++ C R+ D + + E+ + PD+ ++ L+ C +G
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFI-QEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
A+E+++ M +G + TY +V++ L K G +EA + +M + + YN
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 245 ITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I+ + E EL + G+ PD ++N L+ C A +++E + GC
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ I LC G D+A + K+ + T L++G K K +EA+
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 364 VI 365
+
Sbjct: 492 IF 493
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S G D A+ QM+ G RSVI++N L+ ++ + +FDE+ + +
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVH 499
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+S + ++Y L+ C S + A +L+++M +G + TY ++L + G+ ++A
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M G + D+ Y I+ G E +L+ ++ G+ +YN ++
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Query: 282 YCKNEMMDEAKKVY-EGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKI 339
+ EA ++ E LE+N P+A ++R LC G G +A E + +
Sbjct: 620 LFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
Query: 340 PDFNTVKLLVEGLV 353
P+F+++ +L EGL+
Sbjct: 680 PEFSSLYMLAEGLL 693
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 17/265 (6%)
Query: 126 LGTPRSVISF-----------NALLFACTRSRLYDKVPI-LFDEIPKKYNLSPDKISYGL 173
L P S ISF + L RS+ D + LF+ KK N SP+ Y
Sbjct: 29 LTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEE 88
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKK 232
+L SGS D ++L +M++ E+ T T+ ++ + +E + M ++
Sbjct: 89 ILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEF 148
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELID-EMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G+ D YN + G+ +L E+ +M G+KPD ++N L+ C+ + A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ E + G P+ TF T + G+ D A ++ ++ V +V ++V G
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 352 LVKKKKIKEAKGVIRTIKKK---FP 373
K+ ++++A I+ + + FP
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFP 293
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 147/313 (46%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G A+ D+M E+ +V++ N L+ C + R+ + + +L D + K
Sbjct: 145 LINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEAL-VLIDRMVK- 202
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y ++I+YG +L C SG++ AL+L +ME + ++ + V Y+ V++ L K GN ++
Sbjct: 203 YGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDD 262
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN---------------------------TYG---- 250
A L++EME KG+ DV AY+ I T+
Sbjct: 263 ALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALID 322
Query: 251 -----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G KEL +EM G+ PDTI+Y+ L+ +CK + EA ++ + + GC P
Sbjct: 323 VFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEP 382
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ I C + D ++F E + D T LV+G + K+ AK +
Sbjct: 383 NIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELF 442
Query: 366 R-TIKKKFPPNVL 377
+ + + PP+V+
Sbjct: 443 QEMVSRGVPPSVV 455
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I S + G D A+ F++M+ G V+++++++ C R D +L + I +
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGR- 308
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ P+ +++ L+ G +A EL NEM +G+ T+TY+++++ K+ E
Sbjct: 309 -NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGE 367
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A ++ M KG + ++ Y++ I N+Y + L E+ GL DT++YN L+
Sbjct: 368 ANQMLDLMVSKGCEPNIVTYSILI-NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C++ ++ AK++++ + G P+ T+ + LC +G KA ++F++ I
Sbjct: 427 QGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMI 486
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+++ G+ K+ +A + ++ K P+VL
Sbjct: 487 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVL 525
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 136/281 (48%), Gaps = 10/281 (3%)
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+IT P L + +S A A+ F +M+E SV+ ++ ++ + + D
Sbjct: 209 EITYGPVLNRMCKSGNTA----LALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL 264
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LF+E+ K + D ++Y ++ C+ G D ++L EM + + VT++ +++
Sbjct: 265 SLFNEMEMK-GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDV 323
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLK 269
K+G EA+ L++EM +G+ D Y+ I RL E ++D M G +
Sbjct: 324 FVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFC--KENRLGEANQMLDLMVSKGCE 381
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ ++Y+ L+ YCK + +D +++ + G + T+ T + C SG + A ++
Sbjct: 382 PNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
F+E V P T +L++GL ++++A + ++K
Sbjct: 442 FQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK 482
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + A + D M G ++++++ L+ + +++ D LF EI K
Sbjct: 354 SLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSK 413
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D ++Y L++ C SG + A EL EM ++GV + VTY +L+ L G ++
Sbjct: 414 -GLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQK 472
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +M+K + L + YN+ I + L + G+KPD ++YN ++
Sbjct: 473 ALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIG 532
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI-YHLCGSGNFDKAYKVFKESVMVHKI 339
CK + EA ++ ++E+GC+P+ T+ I HL GSG + ++ +E M
Sbjct: 533 GLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVI-SSVELIEEMKMRGFA 591
Query: 340 PDFNTVKLLV 349
D +T+K++V
Sbjct: 592 ADASTIKMVV 601
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 92/268 (34%), Gaps = 71/268 (26%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGV-------------------------- 199
P I + L + D L EM+ G+
Sbjct: 67 PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSV 126
Query: 200 ---------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--- 247
E T+T++T++N +G EA L M + +V N I
Sbjct: 127 VGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCL 186
Query: 248 ------------------------TYG---------GDPERLKELIDEMRDAGLKPDTIS 274
TYG G+ +L +M + +K +
Sbjct: 187 KGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y+ ++ CK+ +D+A ++ +E G + + + I LC G +D K+ +E +
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+ IP+ T L++ VK+ K+ EAK
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAK 334
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
EM G++ + + N ++ C+C+ + A V + G PN TF T I C G
Sbjct: 94 EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+A + V + P+ TV L+ GL K ++ EA +I R +K N
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEAN 208
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 153/332 (46%), Gaps = 6/332 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++++ + + P Y V L K+ R + + ++ P
Sbjct: 117 DSAMEMFREMKIKGSEP--DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYN 174
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ ++ + G D A+ F +M G SV+++N LL A + LF ++
Sbjct: 175 LLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGD 234
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD +Y L+ SG ++A ++ EM ++GV V V Y ++L L K GN +
Sbjct: 235 -GCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDR 293
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
+L EM +KG D ++N I + G P+ +E+ M ++G KPD ISYN L+
Sbjct: 294 VWKLMKEMSRKGFHPDAFSFNT-IMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y + +A+++ E + E G P T+ + I+ L G D+A+ V +E
Sbjct: 353 DSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCR 412
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++ L K+ + + A + + +K K
Sbjct: 413 PDVVTYNRLMDMLGKRGENQRAARLFQQMKDK 444
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 153/316 (48%), Gaps = 6/316 (1%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+ETL++ + + + L LI +YG+ A F+Q + +V +F L+
Sbjct: 14 LETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLID 73
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
S +++ +++ ++ +K D+ +Y +L++ SG D A+E+ EM+ KG E
Sbjct: 74 ILVNSGEFERAELVYKKLVQK-GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSE 132
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKE 258
TY ++N L K G +EA + M ++G+ ++ YN+ + + + G +
Sbjct: 133 PDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNL-LMDAFRKVGQLDMALG 191
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L EM+ G +P ++YN L+ C + A+K++ + +GCSP++ T+ T + L
Sbjct: 192 LFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG 251
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
SG ++A+KVF+E V D L+ L K + +++ + +K F P+
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAF 311
Query: 378 RAWKKVEEELGLVPAP 393
++ + + LG P
Sbjct: 312 -SFNTIMDALGKANKP 326
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 133/309 (43%), Gaps = 39/309 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL +++ + + P Y ++ + L + R L D
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTY--NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ G++G + A + F +M + G ++++N+LL ++ D+V L E+ +K
Sbjct: 245 TLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRK 304
Query: 162 --------YNL--------------------------SPDKISYGLLLKSHCDSGSSDKA 187
+N PD ISY +L+ S+ G + +A
Sbjct: 305 GFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQA 364
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++L EM G T TY ++++ L G +EA + EME G DV YN R+ +
Sbjct: 365 RQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYN-RLMD 423
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G G+ +R L +M+D G++PDT+SY + ++ +DEA +++ ++ GC
Sbjct: 424 MLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPV 483
Query: 306 NATTFRTWI 314
+ +R I
Sbjct: 484 DKAMYRILI 492
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI SY + G A + ++M E G ++N+L+ D+ + +E+ +
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM-ETA 409
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y L+ G + +A L +M++KGVE T++Y ++ L +EA
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE 262
L+ +M+ G +D A Y + I + GD E +L E
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 76/188 (40%), Gaps = 3/188 (1%)
Query: 41 PDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
PD A ++++ + + P Y ++ + A+ + ++E I +
Sbjct: 326 PDAAREVFARMVESGCKPDLISY--NILIDSYARFGDAAQARQMLEEMVEAGFIPETKTY 383
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+LI G D A ++M+ G V+++N L+ + + LF ++
Sbjct: 384 NSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKD 443
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + PD +SY + + D+AL L +M+ G V Y ++ ++ G+ E
Sbjct: 444 K-GVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
Query: 221 EAERLWSE 228
+L E
Sbjct: 503 LEAQLKHE 510
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 148/304 (48%), Gaps = 8/304 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQ 122
++ V + + R D IE KN P EP + +++ A ++ A +
Sbjct: 106 NVVVNGICQEGRVDDA---IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGE 162
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M + G P +V++FN L+ R L + + ++IPK Y +P+ +SY LL + C
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK-YGCTPNSLSYNPLLHAFCKQK 221
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
DKA+ L+ M ++G V+Y T+L L + G + A L +++ KG + +YN
Sbjct: 222 KMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYN 281
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I T G + EL++EM GL+PD I+Y+ + C+ + +++A + + +++
Sbjct: 282 TVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G PN + I LC A +F + +P+ +T +L+EGL + IKEA
Sbjct: 342 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401
Query: 362 KGVI 365
+ ++
Sbjct: 402 RDLL 405
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G +A+ D+M V+++ LL A + Y + L DE+ K
Sbjct: 38 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK- 96
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y +++ C G D A+E L + + G E TV+Y VL L E+A
Sbjct: 97 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 156
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM +KG +V +N+ I+ G E E+++++ G P+++SYN L+
Sbjct: 157 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 216
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---FKESVMVHK 338
+CK + MD+A + + GC P+ ++ T + LC SG D A ++ K+
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 276
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ +NTV ++GL K K KEA ++ + K P+++
Sbjct: 277 LISYNTV---IDGLTKAGKTKEALELLNEMVSKGLQPDII 313
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 8/294 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ ++ + P + Y ++ ++ L ++R+ D E L+
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSY--NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G+ + A+ +Q+ + G + +S+N LL A + + DK D + +
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +SY LL + C SG D A+ELL+++++KG ++Y TV++ L K G +E
Sbjct: 237 -GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 295
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
A L +EM KG+ D+ Y+ D R+++ I +++D G++P+T+ YN +
Sbjct: 296 ALELLNEMVSKGLQPDIITYSTIAAGLCRED--RIEDAIRAFGKVQDMGIRPNTVLYNAI 353
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ CK A ++ + NGC PN +T+ I L G +A + E
Sbjct: 354 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 407
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 138/287 (48%), Gaps = 7/287 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ Y AG D A R +M ++N L+ C R R + + +L DE+ ++
Sbjct: 6 MVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVL-DEMLRR 61
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++Y +LL++ C +A++LL+EM +KG VTY V+N + ++G ++
Sbjct: 62 -RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A + G + + +YN+ + + E +EL+ EM G P+ +++N L++
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ +++ A +V E + + GC+PN+ ++ ++ C DKA V P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
D + L+ L + ++ A ++ +K K VL ++ V + L
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y ++ +C +G D A L+ EM VE TY T++ L +G A + E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 229 MEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
M ++ DV Y + + T G + +K L+DEMRD G PD ++YN ++ C+
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMK-LLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+D+A + + L GC PN ++ + LC + ++ A ++ E P+ T
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKK 370
+L+ L +K ++ A V+ I K
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPK 200
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G V +FN+L+ + + LF+E+ K PD+ +Y +L+ S C G ++
Sbjct: 416 GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK-GCHPDEFTYNMLIDSLCSRGRLEE 474
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL LL EME+ G VTY T+++ K EEAE ++ EME +G+ +V YN I
Sbjct: 475 ALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID 534
Query: 247 NTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E +L+D+M GLKPD +YN L+T +C+ + +A + + + NGC P
Sbjct: 535 GLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEP 594
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
++ T+ T I L +G + A ++ + + + T +++ L ++K+ EA +
Sbjct: 595 DSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLF 654
Query: 366 RTIKKKFPP 374
R + +K P
Sbjct: 655 REMMEKGDP 663
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Y + G + + D+M G +FN+L+ C + + IL ++ +
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEIL--DVMLQ 344
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +Y L+ C G ++A+E+LN+M + TVTY T+++ L K+ EE
Sbjct: 345 EGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEE 404
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMT 280
A L + KG+ DV +N I + RL EL +EM+ G PD +YN L+
Sbjct: 405 ATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLID 464
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C ++EA + + +E +GCS N T+ T I C + ++A ++F E +
Sbjct: 465 SLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISR 524
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T L++GL K ++++EA ++
Sbjct: 525 NVVTYNTLIDGLCKNRRVEEAAQLM 549
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 164/362 (45%), Gaps = 6/362 (1%)
Query: 14 TTAAGSSTTA--SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRR 71
+T + S TT + + + + LR + D D LD+ SK + V S + +R+
Sbjct: 56 STLSPSPTTQLPQNFTPKQLRDALRRQSDEDSILDLLDWASKQ-PNFVPSSVIYEEVLRK 114
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE-LGTPR 130
L K F + +++ K+ + LI SY + +FD A+ D M+E G
Sbjct: 115 LGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKL 174
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++N LL V I+ + + + PD ++ +L+K+ C + A+ +
Sbjct: 175 DAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR-GIKPDVTTFNILIKALCRAHQIRPAILM 233
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
+ EM + G+ T+TT++ ++GN A R+ +M G NV +
Sbjct: 234 MEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCK 293
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G E + IDEM + G +PD ++N L+ C+ + A ++ + + + G P+ T
Sbjct: 294 EGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFT 353
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ + I+ LC G ++A ++ + ++ P+ T L+ L K+ +++EA + R +
Sbjct: 354 YNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLT 413
Query: 370 KK 371
K
Sbjct: 414 SK 415
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + + A FD+M+ G R+V+++N L+ ++R ++ L D++ +
Sbjct: 497 LIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLME- 555
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PDK +Y LL C +G KA +++ M + G E +VTY T++ L K G E A
Sbjct: 556 GLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELA 615
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
RL ++ KG+ L YN I K L E R +
Sbjct: 616 SRLLRTVQLKGMVLAPQTYNPVI-----------KALFREKRTS---------------- 648
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKIPD 341
EA +++ + E G P+A T++ LC G G +A E +PD
Sbjct: 649 -------EAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701
Query: 342 FNTVKLLVEGL 352
F++ +L EGL
Sbjct: 702 FSSFLMLAEGL 712
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 148/301 (49%), Gaps = 9/301 (2%)
Query: 69 VRRLAKSK--RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE- 125
+RRLA S + L+ ++ P+ ++ L ++ ++ +A M D A+ F +
Sbjct: 54 LRRLATSSPSHLPCLLNLLPRLRHRPRFSESAALV-VLSAFSRAIMPDAALDAFRALPSI 112
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY---NLSPDKISYGLLLKSHCDSG 182
LG + S NALL A R+R + F + ++P+ +Y ++L+S C G
Sbjct: 113 LGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARG 172
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D+A+ L + + + V +TY+T++ L KQ + A L EM + GV DV YN
Sbjct: 173 DLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYN 232
Query: 243 VRITNTY-GGDPERLKELIDEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ + G+ E++ + D++ +D G +P+ +YN ++ CK E +V+E +
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVA 292
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
N P+ T+ I+ LC SG+ D A +V+ E + + D LV+G + +++E
Sbjct: 293 NNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQE 352
Query: 361 A 361
A
Sbjct: 353 A 353
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 140/279 (50%), Gaps = 7/279 (2%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
IT +C L + DHA+ D+M G V+ +NALL C ++ ++KV
Sbjct: 194 ITYSTLMCGL----AKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMR 249
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
++D++ K P+ +Y ++L C G + E+ M ++ +TY +++ L
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
+ G+ + A R++SE+ K G+ +D A YN + G + + D AGL+ +
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NL 368
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+YN ++ + M+DEA ++++ LE++ C P+ TF T I+ LC +G +KA+ +F+
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
E+ + K D + ++ GL ++ +A V + K
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 26/290 (8%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L++ + QAG A + +D G R++ ++N ++ S + D+ L+D + K
Sbjct: 339 SLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKD 397
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +++G L+ C +G ++KA + E G ++ +Y++++N L G +
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN---TY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
A +++ +M+K G + YN I+ Y D R+ +M D G P I+YN
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS---KMADNGCSPTVITYNT 514
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA--------YKV 329
L+ CK E EA V + ENG +P+ TT+ + I L D A YK
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNVL 377
K VM+H I L+ GL K+ EA V +K+K PPN++
Sbjct: 575 LKVDVMMHNI--------LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 5/261 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++I G A++ +++MD+ G + +NAL+ C R D V I + ++
Sbjct: 444 SMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI-YSKMAD 502
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
SP I+Y L+ C + +A + EM G TY +++ L+ +
Sbjct: 503 N-GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A +W ++ KG+ +DV +N+ I + G E L D P+ ++YN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M + +D+A ++ + E+G P+ ++ T I LC + ++ E +
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681
Query: 339 IPDFNTVKLLVEGLVKKKKIK 359
IP T +LV ++K I+
Sbjct: 682 IPTVITWNILVRAVIKYGPIQ 702
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND---PKITQEPYL 100
A+ IYS ++ + SP Y + + L K++++ + ++ + P IT
Sbjct: 493 AVRIYSKMADNGCSPTVITY--NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG-- 548
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+LIR D A+ + Q+ G V+ N L+ + D+ +F ++ +
Sbjct: 549 -SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKE 607
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K N P+ ++Y L+ ++G DKA L + G+E ++Y T + L
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH 667
Query: 221 EAERLWSEMEKKGVDLDVAAYN--VRITNTYG 250
E +L E+ +G+ V +N VR YG
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G + +MD G +++N L+ + + + +L E+ +
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRN- 337
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD ++Y L+ + C +G+ ++A+E ++M +G+ VTYT+++N ++G +EA
Sbjct: 338 GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEA 397
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R+W EM + G + YN + + G E L+ M GL PD +SY+ ++
Sbjct: 398 YRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG 457
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+ + +D A ++ + E G SP+A T+ + I LC ++A +F+E + +PD
Sbjct: 458 FCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L+ G K+ + EA + IKK F P+ +
Sbjct: 518 EFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTV 554
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 58/335 (17%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL------- 154
LI + Q G D A R +D+M G P +++++NALL C R+ + + +L
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 155 -----------------FDEIPKKYNL---------SPDKISYGLLLKSHCDSGSSDKAL 188
+ E+ + + + SPD I+Y L++ C+ ++A
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+L EM NK + TYT+++N K+G+ EA L EM KKG D YNV I
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563
Query: 249 YGGDPER------LKELIDEMRDAGLKPDTI----------SYNFLMTCYCKNEMMDEAK 292
R LK DE G+ DT+ S L+ +C +M+EA
Sbjct: 564 NKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEAD 623
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+V+E + + PN + I+ C GN KA+K++KE V IP T+ LV+ L
Sbjct: 624 QVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683
Query: 353 VKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
+ ++ VIR ++LR+ K + EL
Sbjct: 684 YSEGMDEQLNLVIR--------DILRSCKLSDAEL 710
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +Y + D A + M G +++++N ++ R ++ + E+ +K
Sbjct: 244 VIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRK- 302
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y L+ +C G+ +AL L +EM G+ VTYT+++N + K GN A
Sbjct: 303 GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRA 362
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M +G+ + Y I + G + + DEM +G P ++YN L+
Sbjct: 363 MEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNG 422
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C + M+EA + G+E G SP+ ++ T I C D+A+++ E V PD
Sbjct: 423 HCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPD 482
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++GL +++++ EA + + + K
Sbjct: 483 AITYSSLIQGLCEQRRLNEACDLFQEMLNK 512
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 129/265 (48%), Gaps = 5/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + + +M G +V S+N L+ + + F+E+ + L P+ ++Y ++
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCL-PNVVTYNTVI 245
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
++C D+A +LL M +G+E +TY V+N L + G EE + +EM++KG
Sbjct: 246 GAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA 305
Query: 236 LDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D YN + N Y G+ + L EM GL PD ++Y L+ CK ++ A +
Sbjct: 306 PDGVTYNT-LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME 364
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + G PN T+ + I G D+AY+++ E + P T L+ G
Sbjct: 365 FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHC 424
Query: 354 KKKKIKEAKGVIRTIK-KKFPPNVL 377
+++EA G++R ++ K P+V+
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVV 449
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 22/292 (7%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG + AM FDQM G + +++ +L+ ++ D+ ++DE+ +
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS- 407
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++Y LL HC SG ++A+ LL ME KG+ V+Y+T++ + + A
Sbjct: 408 GFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRA 467
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
++ +EM +KGV D Y+ I + RL E L EM + L PD +Y L+
Sbjct: 468 FQMNAEMVEKGVSPDAITYSSLIQGL--CEQRRLNEACDLFQEMLNKSLLPDEFTYTSLI 525
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YCK ++EA +++ + + G P+ T+ I L +A ++ + I
Sbjct: 526 NGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESI 585
Query: 340 PD---------------FNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
P+ F +V L++G K + EA V + IK+ PN
Sbjct: 586 PNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPN 637
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 17/264 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + D A + +M E G I++++L+ R ++ LF E+ K
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK- 512
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L PD+ +Y L+ +C G ++AL L +EM KG TVTY ++N L KQ EA
Sbjct: 513 SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREA 572
Query: 223 ERL-----WSEMEKKGVDLDV---AAYNVRITNTYG--------GDPERLKELIDEMRDA 266
+RL + E G+ D + ++ + G ++ + M
Sbjct: 573 KRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKR 632
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
KP+ YN ++ +C++ + +A K+Y+ + + G P+ T + L G ++
Sbjct: 633 NQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQL 692
Query: 327 YKVFKESVMVHKIPDFNTVKLLVE 350
V ++ + K+ D K LV+
Sbjct: 693 NLVIRDILRSCKLSDAELSKALVQ 716
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 138/272 (50%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I Y G + A R D M G ++ +L+ C RL ++ LFD++ +
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL-EEASGLFDKM-VE 271
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ ++Y L+ +C+ G ++A +EM KG+ + TY +++ L+ +G E
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A+ + EM KKG+ D YN+ I N Y G+ +R +L +EM G++P ++Y L+
Sbjct: 332 ADDMIKEMRKKGIIPDAITYNILI-NGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLI 390
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ M EA ++E + + G SP+ F I C +GN ++A+ + KE
Sbjct: 391 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVP 450
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++G ++ K++EA+ ++ +K +
Sbjct: 451 PDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 137/270 (50%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G + A D+M + G SV ++N L+ A + + E+ KK
Sbjct: 284 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK- 342
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I+Y +L+ + G++ +A +L NEM +KG+E T VTYT+++ L ++ +EA
Sbjct: 343 GIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++ +GV DV +N I + G+ ER L+ EM + PD +++N LM
Sbjct: 403 DDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 462
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ ++EA+ + + ++ G P+ ++ T I G+ A+ V E + + P
Sbjct: 463 RCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPT 522
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++ L K ++ A+ +++ + K
Sbjct: 523 LLTYNALIKCLCKNQEGDLAEELLKEMVNK 552
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTI 273
+G ++A ME G +V +YN I + Y G+ E + ++D MR G++PD+
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNT-IIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y L++ CK ++EA +++ + E G PNA T+ T I C G+ ++A+ E
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V +P +T LLV L + ++ EA +I+ ++KK
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK 342
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LFDE+ LS D++S + G KA E + ME G + V+Y T+++
Sbjct: 163 LFDEL----TLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 218
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
+GN E A R+ M KG++ D Y I+ G E L D+M + GL P+
Sbjct: 219 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 278
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ YC ++ A + + + G P+ +T+ ++ L G +A + KE
Sbjct: 279 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 338
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
IPD T +L+ G + K A
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRA 367
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 155/326 (47%), Gaps = 7/326 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KAL + + H+ V + DL + A+ + +LI ++ +I P
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRS-LRIGPSPKTFA 130
Query: 103 LI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ Y AG D A++ F M E G + + SFN +L +S+ +K LF + +
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ S D ++Y ++L C + KALE+L EM +G+ TY T+L ++ G
Sbjct: 191 F--SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + EM+K+ ++DV Y + + +G G+ +R + + DEM G+ P +YN ++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTT-VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + ++ A ++E + G PN TT+ I L +G F + ++ +
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
P+F T +++ + ++++A G+
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLF 393
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 171/382 (44%), Gaps = 42/382 (10%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE-TLIESHKN-DP 92
+R + DP AL +++ V + + +L +F +E L E KN D
Sbjct: 14 IRYQNDPLNALKMFNQVKTEDGFK-HTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDS 72
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
K+ + Y+ ++R YG+ G A+ F++MD SV S+NA++ + +
Sbjct: 73 KMLEGVYI-GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAH 131
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL-- 210
++ + K + PD ++ + +KS C +G AL LLN M +G E V+Y V+
Sbjct: 132 KVYMRM-KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISG 190
Query: 211 ----NC-----------------------------LYKQGNAEEAERLWSEMEKKGVDLD 237
NC L K+GN +E+E+L+S++ K+GV +
Sbjct: 191 FYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN 250
Query: 238 VAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+ +N+ I G + L++ + GL PD ISYN L+ +CK+ + EA+
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ +G PN T+ T I C +G A K+ ++++ IPD T L+ GL
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370
Query: 357 KIKEAKGVI-RTIKKKFPPNVL 377
+ A V ++K F +++
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSII 392
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
I+ + G D A R + + G VIS+N L+ C S+L + L +
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS- 315
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P++ +Y ++ C +G A ++L + KG TY++++N L G+
Sbjct: 316 -GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ E +KG + YN + + G + +L+ +M + G PD +YN ++
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI- 339
CK + +A + GC P+ TF T I C N DKA ++ ++++ H I
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL-DTMLSHGIT 493
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
PD T L+ GL K +K+ + ++K PN++
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 4/272 (1%)
Query: 103 LIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + +AGM +A + D M + P + + C + + + ++ + K
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ S I Y L+K G +AL+L+ +M G TY V+N L K G +
Sbjct: 387 FKHSI--ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + ++ KG D+ +N I + ++ E++D M G+ PD I+YN L+
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D ++ + E GC+PN T+ I C +A ++FKE P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
D T+ L+ GL ++ +A + TI+K++
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L++ + G+ A++ M E G + ++N ++ C L D IL D I K
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK- 455
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++ L+ +C + DKA+E+L+ M + G+ +TY T+LN L K +
Sbjct: 456 -GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTIS----- 274
+ M +KG ++ YN+ I ++ D + EL EM+ GL PD ++
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILI-ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 275 -------------------------------YNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+N ++ +C+ + A+K++ + + C
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDC 633
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+P+ T+R I C +GN D A+ E++ +P F T ++ L ++ EA
Sbjct: 634 APDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVV 693
Query: 364 VIRTI 368
+I +
Sbjct: 694 IINLM 698
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 142/334 (42%), Gaps = 25/334 (7%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+AL + + +H SP + +L V L K SD ++ I
Sbjct: 409 QALQLMKDMMEHGCSP--DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNT 466
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A+ D M G VI++N LL ++R D V F + +K
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK- 525
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ I+Y +L++S C +A+EL EM+ +G+ VT T++ L G ++A
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585
Query: 223 ERLWSEMEKK-GVDLDVAAYNVRITNTYGGDPERL-----KELIDEMRDAGLKPDTISYN 276
L+ +EK+ A +N+ I N + E+L ++L +M + PD +Y
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMI-NAF---CEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ YCK +D A G P+ TT + LC + +A + V
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701
Query: 337 HKIP-DFNTV-----------KLLVEGLVKKKKI 358
+P + N++ K++VE L+KK I
Sbjct: 702 GIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHI 735
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 4/194 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D +D + ++ + +P Y ++ + K ++ S+ L + K LC
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITY--NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570
Query: 102 NLIRSYGQAGMFDHAMRTFDQMD-ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI G D A F ++ E S FN ++ A LF ++
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGG 630
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ +PD +Y +++ S+C +G+ D A L E +KG+ + T VLNCL
Sbjct: 631 S-DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689
Query: 221 EAERLWSEMEKKGV 234
EA + + M + G+
Sbjct: 690 EAVVIINLMVQNGI 703
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 143/279 (51%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + G D A+R D+M LG ++ N+L+ C R +++ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV--D 395
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+NL PD SY LL +C G + +A L ++M +G+E T +TY T+L L + G ++
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++W M K+GV D Y+ + + + E L ++ G I++N +++
Sbjct: 456 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI- 339
CK M EA+++++ +++ GCSP+ T+RT I C + N +A+KV K ++ I
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV-KGAMEREPIS 574
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
P L+ GL K +++ E ++ + + PN++
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 613
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +A A + M+ S+ +N+L+ +SR +V L E+ +
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR- 606
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ ++YG L+ C G DKA EM G+ + +T+++ LY+ G +EA
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
Query: 223 ERLWSEMEKKGVDLDVAAY---NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
L +M G D + ++R +++ + +DE L P+ I YN +
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAI-----QKIADSLDESCKTFLLPNNIVYNIAI 721
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +D+A++ + L G P+ T+ T I+ +GN D+A+++ E + +
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T L+ GL K + + A+ + + +K PNV+
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 820
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y G + A M E G R+V+++ L+ + D+ + + ++
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD+ +YG+L+ +C +G D A+ LL+EM G++ +++N K+G E
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE + + M + D +YN + G L D+M G++P ++YN L+
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ D+A +++ + + G +P+ + T + L NF+ A ++K+ +
Sbjct: 446 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++ GL K K+ EA+ + +K
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + GM D A ++ +M E G ++I + ++ R D+ +L ++ +
Sbjct: 618 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD-H 676
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + LKS + K + L+E + + Y + L K G ++A
Sbjct: 677 GFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 733
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R +S + KG D Y I + G+ + L DEM GL P+ ++YN L+
Sbjct: 734 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 793
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+E +D A++++ L + G PN T+ T I C GN D A+K+ + + P
Sbjct: 794 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 853
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T L+ GL K I+ + ++ + K
Sbjct: 854 VVTYSALINGLCKHGDIERSMKLLNQMIK 882
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI Y AG D A R D+M G +++++NAL+ +S D+ LF ++ +
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 812
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L P+ ++Y L+ +C G+ D A +L ++M +G+ + VTY+ ++N L K G+ E
Sbjct: 813 K-GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
+ +L ++M K GVD + Y + G+ +++ +L D M L IS+
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ Y + G+ +A+ FD M + G S+ S N+LL ++ ++ ++ +
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR-V 220
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +++ + C G D+A + +MEN GVE VTY +++N G+ E A
Sbjct: 221 GIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAA 280
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ + M +KGV +V ++Y L+ Y
Sbjct: 281 KGVLKFMSEKGVSRNV----------------------------------VTYTLLIKGY 306
Query: 283 CKNEMMDEAKKVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK MDEA+KV G+ EE P+ + I C +G D A ++ E + + +
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
L+ G K+ +I EA+GVI R + P+
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +Y L+ + +G+ D+A L +EM +G+ VTY ++N L K N + A+RL
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ ++ +KG+ +V YN I G+ + +L D+M + G+ P ++Y+ L+ CK
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ ++ + K+ + + G + T + SG K +K++
Sbjct: 867 HGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 113/241 (46%), Gaps = 9/241 (3%)
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGM-----FDHAMRTFDQMDELGTPRS 131
R++ I+ + +S K P N++ + AG+ D A R F + G
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPN--NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++ L+ + + D+ L DE+ ++ L P+ ++Y L+ C S + D+A L
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRR-GLVPNIVTYNALINGLCKSENVDRAQRLF 807
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
+++ KG+ VTY T+++ K GN + A +L +M ++G+ V Y+ I
Sbjct: 808 HKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKH 867
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
GD ER +L+++M AG+ I Y L+ Y ++ M + K+Y+ + S A +
Sbjct: 868 GDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927
Query: 311 R 311
+
Sbjct: 928 K 928
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 4/272 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR Y + G+FD A+ F+ M G I+ N +L R+ + + L ++ +
Sbjct: 536 SLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEH 595
Query: 162 -YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+NL+P SY ++ C G ++ALELL M + V + V Y+T+++ KQ N +
Sbjct: 596 GFNLNPH--SYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFK 653
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A L++ M K G+ ++A Y + ++ ++ + EM++ GL D ISY L+
Sbjct: 654 RAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLI 713
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C N M +A ++E + GCSPN T+ I C S D A VF + I
Sbjct: 714 VGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVI 773
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +L++ K +A + +K K
Sbjct: 774 PDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDK 805
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 137/300 (45%), Gaps = 9/300 (3%)
Query: 79 SDIETLIESHKNDPKITQEPYL--CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
S +E ++ N + EP + CN L++ +A + R F+++ + G ++ ++
Sbjct: 261 SMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTY 320
Query: 136 NALL-FACTRSRL---YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++ F C+ + ++ +I + P ++Y + C G+ + AL L+
Sbjct: 321 TIMMNFYCSDVGCDAGMRQAAVILGKIYRS-GEKPTVVTYSTYIHGLCKVGNVEAALMLI 379
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+ + + ++ V+ K+G EA ++ EM+ G+ DV +Y++ I G
Sbjct: 380 RNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGK 439
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
GD + +L++EM + +KP +SY L+ CK M+ A ++ + + C ++T +
Sbjct: 440 GDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVY 499
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T I C G+ D A K+ +E + +P + + L+ G K +A V + +
Sbjct: 500 ETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLR 559
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 126/311 (40%), Gaps = 40/311 (12%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKY 162
I + G + A+ + P + SFN +++ C R +++ + +L E K
Sbjct: 363 IHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVL--EEMKSS 420
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +L+ + C G K L+L+ EME+ ++ + V+YT++++ L K+ + A
Sbjct: 421 GILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNA 480
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ + D Y I GD + +L++EM L P S L+
Sbjct: 481 VDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRG 540
Query: 282 YCKNEMMDEAKKVY-----------------------------------EGLEENGCSPN 306
Y K + D+A +V+ E +E+G + N
Sbjct: 541 YYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLN 600
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI- 365
++ IY LC G ++A ++ + + +P L+ G K+ K A +
Sbjct: 601 PHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFT 660
Query: 366 RTIKKKFPPNV 376
R +K N+
Sbjct: 661 RMVKVGITFNI 671
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 39/270 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + M ++A+ F +G + + N LL + + V +F+E+ K
Sbjct: 253 LISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL-KDR 311
Query: 163 NLSPDKISYGLLLKSHCDSGSSD----KALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
SP+ +Y +++ +C D +A +L ++ G + T VTY+T ++ L K GN
Sbjct: 312 GPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGN 371
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E A L + L+ ++N I YG
Sbjct: 372 VEAALMLIRNLHYTNQPLNSHSFNDVI---YG---------------------------- 400
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+CK + EA +V E ++ +G P+ ++ I CG G+ K + +E
Sbjct: 401 ---FCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQI 457
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
P + L+ GL KK ++ A + +I
Sbjct: 458 KPSIVSYTSLIHGLCKKNMLQNAVDIFHSI 487
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 3/210 (1%)
Query: 34 KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
KL E P++AL++ + K P Y+ + AK F L
Sbjct: 610 KLCKEGYPERALELLPRMLKRNVLPSVVNYST--LISGFAKQSNFKRAVNLFTRMVKVGI 667
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
L+ + + A F +M E G IS+ L+ +R K
Sbjct: 668 TFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWA 727
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E+ ++ SP+ I+Y ++ C S D A + ++M V VTYT +++
Sbjct: 728 LFEEMSRE-GCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWY 786
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+K G ++A +L+ M+ KGV D +NV
Sbjct: 787 HKHGYFDQAHKLYDVMKDKGVLPDDITHNV 816
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 126/307 (41%), Gaps = 30/307 (9%)
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
P+ SR + L+ +A+ K+F + +E H I+ + + ++ AGM
Sbjct: 160 PLVSRVFKSLS-WSVARKKKFGN---WVECHGFSHSISCFRII---VHAFALAGM----- 207
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+++ R ++ F C ++ YD + + ++ + + +L+
Sbjct: 208 ----RLEVWALLRDIVGF------CNEAK-YDTFELFSAFLDSPQHVERSGVVFDVLISV 256
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+ + AL++ + ++ G+E T +L CL + E R++ E++ +G +
Sbjct: 257 FASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPN 316
Query: 238 VAAYNVRITNTYGGDP------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ Y + + N Y D + ++ ++ +G KP ++Y+ + CK ++ A
Sbjct: 317 IYTYTI-MMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAA 375
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ L N+ +F IY C G +A +V +E +PD + +L+
Sbjct: 376 LMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINA 435
Query: 352 LVKKKKI 358
K +
Sbjct: 436 FCGKGDV 442
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PER 255
+ VE + V + +++ E A ++S + G++ D+ N + + E
Sbjct: 241 QHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEF 300
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKN----EMMDEAKKVYEGLEENGCSPNATTFR 311
++ + +E++D G P+ +Y +M YC + M +A + + +G P T+
Sbjct: 301 VRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYS 360
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T+I+ LC GN + A + + ++ + ++ ++ G K+ ++ EA V+ +K
Sbjct: 361 TYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMK 418
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 172/387 (44%), Gaps = 52/387 (13%)
Query: 35 LRSEFDPDKALDIYSSVS-----KHYASPVSSRYAQDLTVRRLAKSKRFSDIE-TLIESH 88
+R + DP AL +++ V KH + +L +F +E L E
Sbjct: 14 IRYQNDPLNALKMFNQVKTEDGFKHTLETYKC------MIEKLGLHGKFEAMEDVLAEMR 67
Query: 89 KN-DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
KN D K+ + Y+ ++R YG+ G A+ F++MD SV S+NA++
Sbjct: 68 KNVDSKMLEGVYI-GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGY 126
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ + ++ + K + PD ++ + +KS C +G AL LLN M +G E V+Y
Sbjct: 127 FSQAHKVYMRM-KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYC 185
Query: 208 TVL------NC-----------------------------LYKQGNAEEAERLWSEMEKK 232
V+ NC L K+GN +E+E+L+S++ K+
Sbjct: 186 AVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR 245
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
GV ++ +N+ I G + L++ + GL PD ISYN L+ +CK+ + EA
Sbjct: 246 GVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA 305
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ + +G PN T+ T I C +G A K+ ++++ IPD T L+ G
Sbjct: 306 ECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLING 365
Query: 352 LVKKKKIKEAKGVI-RTIKKKFPPNVL 377
L + A V ++K F +++
Sbjct: 366 LCNDGDMNRAMAVFYEAMEKGFKHSII 392
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
I+ + G D A R + + G VIS+N L+ C S+L + L +
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS- 315
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P++ +Y ++ C +G A ++L + KG TY++++N L G+
Sbjct: 316 -GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ E +KG + YN + + G + +L+ +M + G PD +YN ++
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI- 339
CK + +A + GC P+ TF T I C N DKA ++ ++++ H I
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL-DTMLSHGIT 493
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
PD T L+ GL K +K+ + ++K PN++
Sbjct: 494 PDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 4/272 (1%)
Query: 103 LIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + +AGM +A + D M + P + + C + + + ++ + K
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ S I Y L+K G +AL+L+ +M G TY V+N L K G +
Sbjct: 387 FKHSI--ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + ++ KG D+ +N I + ++ E++D M G+ PD I+YN L+
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D ++ + E GC+PN T+ I C +A ++FKE P
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
D T+ L+ GL ++ +A + TI+K++
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 129/305 (42%), Gaps = 42/305 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L++ + G+ A++ M E G + ++N ++ C L D IL D I K
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK- 455
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++ L+ +C + DKA+E+L+ M + G+ +TY T+LN L K +
Sbjct: 456 -GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTIS----- 274
+ M +KG ++ YN+ I ++ D + EL EM+ GL PD ++
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILI-ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 275 -------------------------------YNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+N ++ +C + A+K++ + + C
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDC 633
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+P+ T+R I C +GN D A+ E++ +P F T ++ L ++ EA
Sbjct: 634 APDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVV 693
Query: 364 VIRTI 368
+I +
Sbjct: 694 IINLM 698
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 19/331 (5%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+AL + + +H SP + +L V L K SD ++ I
Sbjct: 409 QALQLMKDMMEHGCSP--DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNT 466
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A+ D M G VI++N LL ++R D V F + +K
Sbjct: 467 LIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK- 525
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ I+Y +L++S C +A+EL EM+ +G+ VT T++ L G ++A
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585
Query: 223 ERLWSEMEKK-GVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLM 279
L+ +EK+ A +N+ I N + + ++L +M + PD +Y ++
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMI-NAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMI 644
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YCK +D A G P+ TT + LC + +A + V +
Sbjct: 645 DSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIV 704
Query: 340 P-DFNTV-----------KLLVEGLVKKKKI 358
P + N++ K++VE L+KK I
Sbjct: 705 PEEVNSIFEADKKEVAAPKIVVEYLLKKSHI 735
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 4/194 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D +D + ++ + +P Y ++ + K ++ S+ L + K LC
Sbjct: 513 DNVVDTFKAMLEKGCTPNIITY--NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570
Query: 102 NLIRSYGQAGMFDHAMRTFDQMD-ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI G D A F ++ E S FN ++ A LF ++
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGG 630
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ +PD +Y +++ S+C +G+ D A L E +KG+ + T VLNCL
Sbjct: 631 S-DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689
Query: 221 EAERLWSEMEKKGV 234
EA + + M + G+
Sbjct: 690 EAVVIINLMVQNGI 703
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ +++N L+ ++ + + LFD++ K + P+ ++ L+ C G + A+E
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKD-GVPPNVVTLNTLVDGMCKHGRINGAVEF 473
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
NEM+ KG++ VTYT ++ N E+A L+ EM + G D Y I+ +
Sbjct: 474 FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G +R ++ +M++AG PD +S+N L+ +C+ +DEA ++ + +E G P+ T
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ T I H +G+F A+++ K+ V +P T L+ + EA + R +
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS 653
Query: 370 --KKFPPNVL 377
K PPN +
Sbjct: 654 STSKVPPNTV 663
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 157/329 (47%), Gaps = 41/329 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K R + L+E ++ P+ N LI Y +A M + A FDQM++ G P
Sbjct: 390 LCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPP 449
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+V++ N L+ C R+ V F+E+ K L + ++Y L+++ C+ + +KA+E
Sbjct: 450 NVVTLNTLVDGMCKHGRINGAVE-FFNEMQGK-GLKGNAVTYTALIRAFCNVNNIEKAME 507
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
L +EM G + Y T+++ L + G + A + S+M++ G D+ ++NV I
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567
Query: 250 GGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+ + E++ EM +AG+KPD ++YN L++ + K A ++ + + + G P
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKE--------------SVMVHKI--------------- 339
T+ I+ C +GN D+A K+F++ +++++ +
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDD 687
Query: 340 -------PDFNTVKLLVEGLVKKKKIKEA 361
P+ NT + +GL +K + +A
Sbjct: 688 MKVKGVKPNTNTFNAMFKGLQEKNWLSKA 716
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 5/253 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR++ + AM FD+M E G I + L+ +++ D+ + ++ K+
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM-KEA 550
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD +S+ +L+ C D+A E+L EMEN G++ VTY T+++ K G+ A
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
RL +M K+G+ V Y I + Y G E +K D + + P+T+ YN L+
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALI-HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILI 669
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ +D A + + ++ G PN TF L KA+++
Sbjct: 670 NSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACN 729
Query: 340 PDFNTVKLLVEGL 352
PD+ T+++L E L
Sbjct: 730 PDYITMEILTEWL 742
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 110/239 (46%), Gaps = 39/239 (16%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+L LI ++G D A + +LG S NALL A R+R + ++ L E+
Sbjct: 272 WLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEM 331
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM---ENKG--VEVTTVTYTTVLNCL 213
K+ ++ P+ +++G+L+ C D+ALE+ +M E+ G VE +TY T+++ L
Sbjct: 332 -KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGL 390
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTI 273
K G EE L M + P + P+T+
Sbjct: 391 CKVGRQEEGLGLVERMRSQ--------------------PRCM-------------PNTV 417
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ YCK M++ A+++++ + ++G PN T T + +C G + A + F E
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNE 476
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 147/275 (53%), Gaps = 7/275 (2%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
++I +L+E + D +T L I Y ++ + A + FD+M + G V + ++
Sbjct: 247 NEILSLMEKNVVDYNVTTYTML---IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI 303
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
+ + + +LFDE+ ++ L P+ +YG L+ C +G A ++N+M++KG
Sbjct: 304 INWNCKFGNMKRAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 362
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERL 256
V+V V + T+++ K+G +EA RL + M++KG ++D N+ I + + E
Sbjct: 363 VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI-IASGFCRSNRREEA 421
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
K L+ M + G+ P+ +S++ L+ YCK + EA+++++ +E+ G +P+ T+ +I
Sbjct: 422 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 481
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
C G ++AYK+ E +PD T L++G
Sbjct: 482 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 149/336 (44%), Gaps = 9/336 (2%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF-SDIETLIESHKNDPKITQEPYLCNLIR 105
I SS+ + P D+ R ++ F S +E + K +I + +
Sbjct: 107 IVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCF-EFLL 165
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
+ ++G + + QM + G V S+ A++ + + L DE+ K
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCK-GFK 224
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P I+Y LL + + E+L+ ME V+ TYT ++ + EEAE+L
Sbjct: 225 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 284
Query: 226 WSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ EM KKG++ DV Y I N G+ +R L DEM + L P+ +Y L+ CK
Sbjct: 285 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 344
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN- 343
M A+ + ++ G N F T + C G D+A ++ +++M K + +
Sbjct: 345 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL--QNIMQQKGFEIDA 402
Query: 344 -TVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T ++ G + + +EAK ++ T++++ PNV+
Sbjct: 403 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 438
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A + M G + + FN L+ + + D+ + I ++
Sbjct: 338 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDE-ALRLQNIMQQK 396
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D + ++ C S ++A LL ME +GV V+++ +++ K+ N EA
Sbjct: 397 GFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEA 456
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL+ MEKKG V YN I G E +LI+EM++ GL PDT +Y L+
Sbjct: 457 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +D A +++ + + G + N T+ I L G D+A+K++ E +PD
Sbjct: 517 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 576
Query: 342 FNTVKLLVEGLVK 354
L+ L K
Sbjct: 577 DGIYSSLIASLHK 589
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + F A R F M++ G SV+++NA + + ++ L +E+ ++
Sbjct: 443 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER- 501
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y L+ SG+ D+ALEL NEM G+ VTYT +++ L K G A+EA
Sbjct: 502 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEA 561
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP 253
+L+ EM K+G+ D Y+ I + + P
Sbjct: 562 FKLYDEMNKEGIVPDDGIYSSLIASLHKVGP 592
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 155/326 (47%), Gaps = 7/326 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KAL + + H+ V + DL + A+ + +LI ++ +I P
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRS-LRIGPSPKTFA 130
Query: 103 LI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ Y AG D A++ F M E G + + SFN +L +S+ +K LF + +
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 190
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ S D ++Y ++L C + KALE+L EM +G+ TY T+L ++ G
Sbjct: 191 F--SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + EM+K+ ++DV Y + + +G G+ +R + + DEM G+ P +YN ++
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTT-VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 307
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + ++ A ++E + G PN TT+ I L +G F + ++ +
Sbjct: 308 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 367
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
P+F T +++ + ++++A G+
Sbjct: 368 PNFQTYNMMIRYYSECSEVEKALGLF 393
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 42/347 (12%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRT 119
+RY + ++ K + D L E D I+ + N LI Y + G D A R
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQML-DNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+++M +G S+ ++N+LL A C +++ + + LF + +K PD ++Y ++
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAME-LFKTMAEK-GFEPDVVTYSTIISGL 123
Query: 179 CDSGSSDKALE------------------------------------LLNEMENKGVEVT 202
C +G +ALE LL EM +KG
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELID 261
+TY T+L+ L + G EA++ + M +G DV AYN + Y G + +L
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
++ G PDT++YN ++ + MDEA+++++ + +GC+PN T+ + C +
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D A+KV +E + +PD T +L++GL K + +A + T+
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 131/254 (51%), Gaps = 2/254 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A + ++M G I++N +L R + FD +P + SPD ++Y
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR-GYSPDVVAYN 223
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL + G +D+A++L ++ KG TVTY ++L L ++ N +EAE ++ +M
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 233 GVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G + A Y++ ++ + + ++++EM G PD ++YN L+ CK ++D+A
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+++ + +NGC+P+ ++ + LC + A +F + +PD T +L++G
Sbjct: 344 HELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDG 403
Query: 352 LVKKKKIKEAKGVI 365
L K K+ EAK ++
Sbjct: 404 LCKAGKLDEAKDLL 417
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 111/217 (51%), Gaps = 5/217 (2%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
SP++ ++ ++LKS C G +L +M + G+ + Y +++ K+G +EA R
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L+ EM G++ + YN + N + + + EL M + G +PD ++Y+ +++
Sbjct: 65 LYEEMVSVGLEPSIYTYN-SLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 283 CKNEMMDEA-KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA + ++ + E GCS N + I LC N ++AYK+ +E +PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
T ++ GL + K+ EAK ++ + + P+V+
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 220
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 8/280 (2%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
IT L L R G A + FD M G V+++N LL A + D+
Sbjct: 185 ITYNTILSGLCR----MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240
Query: 154 LF-DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LF D I K Y PD ++Y +L + D+A E+ +M G TY+ VL+
Sbjct: 241 LFKDVIAKGY--MPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSG 298
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPD 271
+ ++A ++ EM K G DV YN+ + + ++ EL M D G PD
Sbjct: 299 HCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+SY+ ++ CK + +A+ +++ + E P+ TF + LC +G D+A +
Sbjct: 359 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 418
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ PD+ L+ GL K+ + +A + + +K+K
Sbjct: 419 QMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 5/239 (2%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C + +L D LF+++ +SPD I Y +L+ + G D+A L EM + G+E
Sbjct: 19 CKQGKLRDGYK-LFEQMLDN-GISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEP 76
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKEL 259
+ TY ++LN K+ +EA L+ M +KG + DV Y+ I+ G E L+ L
Sbjct: 77 SIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML 136
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+M + G +T++YN L+ CK+E ++ A K+ E + G P+ T+ T + LC
Sbjct: 137 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCR 196
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
G +A + F PD L++ L K+ K EA + + I K + P+ +
Sbjct: 197 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A F +M G + +++ +L R++ D + +E+ K PD ++Y
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM-SKIGAVPDVVTYN 328
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+LL C + DKA EL + M + G V+Y+ VLN L K +A L+ M ++
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ DV +N+ + G + K+L+D+M +G PD ++YN LM K +A
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448
Query: 292 KKVYEGLEENG 302
++ + ++E G
Sbjct: 449 DRLTQAMKEKG 459
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A +++ + +P + Y+ + + ++K+ D ++E KI P +
Sbjct: 271 DEAEEMFKKMVASGCAPNGATYS--IVLSGHCRAKKVDDAHKVLEEMS---KIGAVPDVV 325
Query: 102 N---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
L+ + + D A F M + G ++S++ +L C ++++D +LFD
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD-ARVLFDR 384
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ ++ L PD +++ +L+ C +G D+A +LL++M G V Y T++N L KQG
Sbjct: 385 MIER-KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQG 443
Query: 218 NAEEAERLWSEMEKKG 233
+A+RL M++KG
Sbjct: 444 RHIQADRLTQAMKEKG 459
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
CSPN TFR + C G YK+F++ + PD +L++G KK ++ EA
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 94 ITQEPYLCNLIR-SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
I+ Y+ N++ +Y + M D AM F +M + G V+++ L+ A + D
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+ F+++ ++P+ + + L+ C +KA EL EM ++GV V + T++
Sbjct: 500 LKFNQMIND-GVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCN 558
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPD 271
L +G A+RL ME+ GV +V +YN I + G + +L+D M GLKPD
Sbjct: 559 LCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPD 618
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
ISY+ L+ YCK +D A ++ + G +P A T+ T + L + F +A +++
Sbjct: 619 LISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
+ + D T +++ GL K + EA + +++ K PN++
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNII 725
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 157/341 (46%), Gaps = 15/341 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSR-YAQDLTVRRLAKSKRFSDIE-TLIESHKNDPKITQEPY 99
D AL ++ + H A P S R + L V A+ S++ +L P
Sbjct: 31 DDALKLFDELLPH-ARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89
Query: 100 LCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
LC L + + G +H F + + G + + N LL C R+ + + IL
Sbjct: 90 LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVT--TVTYTTVLNC 212
+P+ + P+ +S LLK C+ ++ALELL+ M E+ G T VTY T+++
Sbjct: 150 RRMPE-FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPD 271
L K + AE + M KGV LDV Y+ I +R + ++ M D G+KPD
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ CK + +D A+ V + + + G P+ T+ T I LC + D+A V +
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
+ PD T L+ G + + KE V+R +++ +
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKE---VVRRLEEMY 366
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 134/287 (46%), Gaps = 5/287 (1%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
E + L+ A D AM +M E G +V+S N LL C R+ + +
Sbjct: 123 VNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALE 182
Query: 153 ILFDEIPKKY-NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+L N +P+ ++Y ++ C + + D+A +L M +KGV++ VTY+T+++
Sbjct: 183 LLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIID 242
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKP 270
L K + AE + M KGV DV YN I +R + ++ M D G+KP
Sbjct: 243 GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 302
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++YN ++ CK + +D A V + + + P+ T+ I+ +G + + +
Sbjct: 303 DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL 362
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNV 376
+E PD T LL++ L K K EA+ + I+K PNV
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNV 409
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 8/332 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ I+S +S+H SP Y + + L K R D ND
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYG--ILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFN 518
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ ++ A F +M + G +V+ FN ++ L D + ++
Sbjct: 519 SLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM-ER 577
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ISY L+ HC +G +D+A +LL+ M + G++ ++Y T+L K G +
Sbjct: 578 VGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDN 637
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNFL 278
A L+ EM +KGV Y+ + + R KEL M +G + D +YN +
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLF--HTRRFSEAKELYLNMIKSGQQWDIYTYNII 695
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +DEA K+++ L PN TF I L G A +F
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P+ T ++++ ++++ + E + ++K
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEK 787
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 122/261 (46%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +A D A M + G V+++N ++ +++ D+ + + K
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK- 333
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ PD +Y L+ + +G + + L EM +G++ VTY+ +L+ L K G EA
Sbjct: 334 DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEA 393
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ M +KG+ +V Y + + G L +L+D M G+ P+ +N ++
Sbjct: 394 RKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCA 453
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K M+DEA ++ + ++G SP+ T+ I LC G D A F + + P+
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
LV GL + ++A+
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAE 534
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 41/263 (15%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+CNL GQ + A R D M+ +G +VIS+N L+ + D+ L D +
Sbjct: 556 MCNLCNE-GQVMV---AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLD-VM 610
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
L PD ISY LL+ +C +G D A L EM KGV VTY+T+L L+
Sbjct: 611 VSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRF 670
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-----TNTY------------------------- 249
EA+ L+ M K G D+ YN+ + TN
Sbjct: 671 SEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIM 730
Query: 250 ------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
GG + +L + GL P+ ++Y +M + ++DE ++ +E++GC
Sbjct: 731 IDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGC 790
Query: 304 SPNATTFRTWIYHLCGSGNFDKA 326
+P++ I L G G +A
Sbjct: 791 TPDSVMLNAIIRSLLGRGEIMRA 813
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 147/275 (53%), Gaps = 7/275 (2%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
++I +L+E + D +T L I Y ++ + A + FD+M + G V + ++
Sbjct: 243 NEILSLMEKNVVDYNVTTYTML---IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI 299
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
+ + + +LFDE+ ++ L P+ +YG L+ C +G A ++N+M++KG
Sbjct: 300 INWNCKFGNMKRAFVLFDEMTER-RLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKG 358
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERL 256
V+V V + T+++ K+G +EA RL + M++KG ++D N+ I + + E
Sbjct: 359 VDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI-IASGFCRSNRREEA 417
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
K L+ M + G+ P+ +S++ L+ YCK + EA+++++ +E+ G +P+ T+ +I
Sbjct: 418 KRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIER 477
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
C G ++AYK+ E +PD T L++G
Sbjct: 478 YCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 149/336 (44%), Gaps = 9/336 (2%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF-SDIETLIESHKNDPKITQEPYLCNLIR 105
I SS+ + P D+ R ++ F S +E + K +I + +
Sbjct: 103 IVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCF-EFLL 161
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
+ ++G + + QM + G V S+ A++ + + L DE+ K
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCK-GFK 220
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P I+Y LL + + E+L+ ME V+ TYT ++ + EEAE+L
Sbjct: 221 PSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKL 280
Query: 226 WSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ EM KKG++ DV Y I N G+ +R L DEM + L P+ +Y L+ CK
Sbjct: 281 FDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACK 340
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN- 343
M A+ + ++ G N F T + C G D+A ++ +++M K + +
Sbjct: 341 AGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRL--QNIMQQKGFEIDA 398
Query: 344 -TVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T ++ G + + +EAK ++ T++++ PNV+
Sbjct: 399 FTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVV 434
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A + M G + + FN L+ + + D+ + I ++
Sbjct: 334 LINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDE-ALRLQNIMQQK 392
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D + ++ C S ++A LL ME +GV V+++ +++ K+ N EA
Sbjct: 393 GFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEA 452
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL+ MEKKG V YN I G E +LI+EM++ GL PDT +Y L+
Sbjct: 453 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +D A +++ + + G + N T+ I L G D+A+K++ E +PD
Sbjct: 513 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 572
Query: 342 FNTVKLLVEGLVK 354
L+ L K
Sbjct: 573 DGIYSSLIASLHK 585
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + F A R F M++ G SV+++NA + + ++ L +E+ ++
Sbjct: 439 LIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQER- 497
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y L+ SG+ D+ALEL NEM G+ VTYT +++ L K G A+EA
Sbjct: 498 GLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEA 557
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP 253
+L+ EM K+G+ D Y+ I + + P
Sbjct: 558 FKLYDEMNKEGIVPDDGIYSSLIASLHKVGP 588
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 143/279 (51%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + G D A+R D+M LG ++ N+L+ C R +++ ++ +
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV--D 361
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+NL PD SY LL +C G + +A L ++M +G+E T +TY T+L L + G ++
Sbjct: 362 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 421
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++W M K+GV D Y+ + + + E L ++ G I++N +++
Sbjct: 422 ALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 481
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI- 339
CK M EA+++++ +++ GCSP+ T+RT I C + N +A+KV K ++ I
Sbjct: 482 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV-KGAMEREPIS 540
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
P L+ GL K +++ E ++ + + PN++
Sbjct: 541 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 579
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +A A + M+ S+ +N+L+ +SR +V L E+ +
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR- 572
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ ++YG L+ C G DKA EM G+ + +T+++ LY+ G +EA
Sbjct: 573 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 632
Query: 223 ERLWSEMEKKGVDLDVAAY---NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
L +M G D + ++R +++ + +DE L P+ I YN +
Sbjct: 633 NLLMQKMVDHGFFPDHECFLKSDIRYAAI-----QKIADSLDESCKTFLLPNNIVYNIAI 687
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +D+A++ + L G P+ T+ T I+ +GN D+A+++ E + +
Sbjct: 688 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 747
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T L+ GL K + + A+ + + +K PNV+
Sbjct: 748 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 786
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y G + A M E G R+V+++ L+ + D+ + + ++
Sbjct: 232 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 291
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD+ +YG+L+ +C +G D A+ LL+EM G++ +++N K+G E
Sbjct: 292 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 351
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE + + M + D +YN + G L D+M G++P ++YN L+
Sbjct: 352 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 411
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ D+A +++ + + G +P+ + T + L NF+ A ++K+ +
Sbjct: 412 GLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 471
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++ GL K K+ EA+ + +K
Sbjct: 472 SRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ Y + G+ +A+ FD M + G S+ S N+LL ++ ++ ++ +
Sbjct: 128 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR-V 186
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +++ + C G D+A + +MEN GVE VTY +++N G+ E A
Sbjct: 187 GIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAA 246
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ + M +KGV +V ++Y L+ Y
Sbjct: 247 KGVLKFMSEKGVSRNV----------------------------------VTYTLLIKGY 272
Query: 283 CKNEMMDEAKKVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK MDEA+KV G+ EE P+ + I C +G D A ++ E + + +
Sbjct: 273 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 332
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
L+ G K+ +I EA+GVI R + P+
Sbjct: 333 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 367
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 7/288 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A + ++ + SP Y + L KS+R ++ L+
Sbjct: 526 QAFKVKGAMEREPISPSIEMYNS--LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGA 583
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + GM D A ++ +M E G ++I + ++ R D+ +L ++ +
Sbjct: 584 LIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVD-H 642
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + LKS + K + L+E + + Y + L K G ++A
Sbjct: 643 GFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDA 699
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R +S + KG D Y I + G+ + L DEM GL P+ ++YN L+
Sbjct: 700 RRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING 759
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
CK+E +D A++++ L + G PN T+ T I C GN D A+K+
Sbjct: 760 LCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI Y AG D A R D+M G +++++NAL+ +S D+ LF ++ +
Sbjct: 719 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 778
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
K L P+ ++Y L+ +C G+ D A +L ++M +G+
Sbjct: 779 K-GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGM-----FDHAMRTFDQMDELGTPRS 131
R++ I+ + +S K P N++ + AG+ D A R F + G
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPN--NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++ L+ + + D+ L DE+ ++ L P+ ++Y L+ C S + D+A L
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRR-GLVPNIVTYNALINGLCKSENVDRAQRLF 773
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+++ KG+ VTY T+++ K GN + A +L +M ++G+
Sbjct: 774 HKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 816
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 8/335 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIE-TLIESHKNDP 92
++ + DP KAL++++S+ K S Y + +L +F +E L++ +N
Sbjct: 14 IKCQKDPMKALEMFNSMRKEVGFKHTLSTYRS--VIEKLGYYGKFEAMEEVLVDMRENVG 71
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
E +++YG+ G A+ F++MD +V S+NA++ S +D+
Sbjct: 72 NHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAH 131
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
++ + + ++PD S+ + +KS C + AL LLN M ++G E+ V Y TV+
Sbjct: 132 KVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGG 190
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKP 270
Y++ E L+ +M GV L ++ +N +R+ GD + ++L+D++ G+ P
Sbjct: 191 FYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL-CKKGDVKECEKLLDKVIKRGVLP 249
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ +YN + C+ +D A ++ L E G P+ T+ IY LC + F +A
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ V PD T L+ G K ++ A+ ++
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 12/307 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K+ +F + E + N+ + + Y N LI Y + GM A R G
Sbjct: 296 LCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP 354
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++ +L+ ++ LF+E K + P+ I Y L+K + G +A +L
Sbjct: 355 DQFTYRSLIDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
NEM KG+ T+ ++N L K G +A+ L M KG D+ +N+ I
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH---- 469
Query: 251 GDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G +LK E++D M D G+ PD +YN L+ CK ++ + Y+ + E GC+P
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAP 529
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N TF + LC D+A + +E PD T L++G K + A +
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 366 RTIKKKF 372
R +++ +
Sbjct: 590 RKMEEAY 596
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 43/324 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ GM A + ++M E G V +FN L+ C + D ++ I K
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ +L+ + + ALE+L+ M + GV+ TY ++LN L K E+
Sbjct: 457 Y--FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ M +KG ++ +N+ + + Y E L L++EM++ + PD +++ L+
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG-LLEEMKNKSVNPDAVTFGTLI 573
Query: 280 TCYCKNEMMDEAKKVYEGLEE-----------------------------------NGC- 303
+CKN +D A ++ +EE + C
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+R + C +GN + YK E + IP T+ ++ L + ++ EA G
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 364 VI-RTIKKKFPPNVLRAWKKVEEE 386
+I R ++K P + V+++
Sbjct: 694 IIHRMVQKGLVPEAVNTICDVDKK 717
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 133/336 (39%), Gaps = 60/336 (17%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
++ + AL+I + + P Y + + L K+ +F D+ +E++K +
Sbjct: 473 TQLKMENALEILDVMLDNGVDP--DVYTYNSLLNGLCKTSKFEDV---METYKTMVEKGC 527
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
P L L+ S + D A+ ++M
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEM------------------------------ 557
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNC 212
K +++PD +++G L+ C +G D A L +ME V +T TY +++
Sbjct: 558 ------KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
++ N AE+L+ EM + + D Y + + G+ + + EM + G P
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK----AY 327
+ ++ C C + + EA + + + G P A +C + DK A
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN------TIC---DVDKKEVAAP 722
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
K+ E ++ + +LL +GL + K++++ KG
Sbjct: 723 KLVLEDLLKKSCITYYAYELLFDGL-RDKRLRKKKG 757
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 149/288 (51%), Gaps = 6/288 (2%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
+ D+ L++S KND I + Y N LI + ++ A + FD+M G ++FN
Sbjct: 230 WKDVVALVDSMKND-GIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFN 288
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+LL ++R++D+ + E+ + P ++Y L+ S+ G +A EL EME
Sbjct: 289 SLLDVYGKARMHDEAIGVLKEM-ELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEV 347
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPE 254
KG++ +TYTT+++ L + G + A + EM + G ++ YN +++ G PE
Sbjct: 348 KGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPE 407
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ + D++R AG PD +++N L+ + +N + E V++ ++++G P T+ + I
Sbjct: 408 -MMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLI 466
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
G FD++ +++K + PD +T ++ L + + ++A+
Sbjct: 467 SSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAE 514
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 140/290 (48%), Gaps = 4/290 (1%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K + + +LI SY + G+FD +M + +M E G + ++NA+
Sbjct: 441 SEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAV 500
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R +++ LF E+ + + PD++SY LL ++ ++ DK L ++ +
Sbjct: 501 LSALARGGRWEQAEKLFAEM-ENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEK 559
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD--PERL 256
+E T++ K N E E+ + E+ ++ LD+ N ++ YG + +++
Sbjct: 560 IESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVS-VYGKNRMVKKV 618
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+E++ M+ + + T +YN LM Y + ++ + + ++ +G P+ ++ T IY
Sbjct: 619 EEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYA 678
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
G +A ++F E IPD T + V+ V +EA ++R
Sbjct: 679 YGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVR 728
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D M G P ++N L+ C R LY + +FDE+ + PDK+++ LL +
Sbjct: 238 DSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEM-RAAGFEPDKVTFNSLLDVYGK 296
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+ D+A+ +L EME G + VTY ++++ K G +EA L EME KG
Sbjct: 297 ARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKG------- 349
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
++PD I+Y L++ + +D A Y+ +
Sbjct: 350 ---------------------------IQPDVITYTTLISGLDRAGKIDAAIGTYDEMLR 382
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NGC PN T+ I G F + VF + +PD T L+ + E
Sbjct: 383 NGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSE 442
Query: 361 AKGVIRTIKK 370
GV + +KK
Sbjct: 443 VSGVFKEMKK 452
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA-EEAER 224
PD +Y L+ + + A+ + M G++ VTY VL+ K ++
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
L M+ G+ LD YN I+ G + ++ DEMR AG +PD +++N L+ Y
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDF 342
K M DEA V + +E GC P+ T+ + I G +A ++ KE + V I PD
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAEL-KEEMEVKGIQPDV 354
Query: 343 NTVKLLVEGLVKKKKIKEAKG 363
T L+ GL + KI A G
Sbjct: 355 ITYTTLISGLDRAGKIDAAIG 375
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 167/349 (47%), Gaps = 44/349 (12%)
Query: 67 LTVRRLAKSKRFSDI-ETLIESHKNDP--KITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
+ V L +SK+F+ + + LIE+ ++D KIT E + + +Y +A + D A+R+F +M
Sbjct: 112 ILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWI-IFTAYSRADLPDGAIRSFVRM 170
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
DE G S+I + LL+ + + + FD++ + L+ +Y +L+ G
Sbjct: 171 DEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTK--TYSILINGWGKIGD 228
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
S KA EL + M +G V + Y +L L K G+ +EA ++M K V+ D Y++
Sbjct: 229 SGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSI 288
Query: 244 RITN---------------------------TYGGDPERL---------KELIDEMRDAG 267
I + TY +RL +L+DEM +G
Sbjct: 289 FIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSG 348
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
LKPDT SYN + +C + ++ A K+ +E++ C P+ T+ + L G FDKA
Sbjct: 349 LKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKAT 408
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKK-KIKEA-KGVIRTIKKKFPP 374
+V++ P +T +++ GL KKK K++EA K I + PP
Sbjct: 409 EVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPP 457
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 11/241 (4%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFD-EIPKKYNLSPDKIS---YGLLLKSHCDSG 182
G SV SF+ L+ RS+ + IL+D I + + S KI+ + ++ ++ +
Sbjct: 102 GFQHSVQSFHILVEILGRSK---QFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRAD 158
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D A+ M+ G++ + + +L L K+ + +A++ + ++ K L Y+
Sbjct: 159 LPDGAIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQV-KSHFLLTTKTYS 217
Query: 243 VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ I N +G GD + +EL D M + G D ++YN L+ CK +DEA +
Sbjct: 218 ILI-NGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLS 276
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
P+A T+ +I C + N A+ V + + +P+ T +++ L K KK++E
Sbjct: 277 KKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEE 336
Query: 361 A 361
A
Sbjct: 337 A 337
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 2/264 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S + A R + +M G +V +F+ L+ A + R + L + KK
Sbjct: 153 IIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK- 211
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++YG ++ +C +KAL + N M +GVE Y ++N L K+ +EA
Sbjct: 212 GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEA 271
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ EM K ++ DV YN+ I G EL+DEMR G D I+YN L+
Sbjct: 272 MNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHA 331
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CKN +D+A + + +++ G PN T+ T I LC G + AY +F+E +
Sbjct: 332 LCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHIT 391
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI 365
T +++ GL KK EA ++
Sbjct: 392 VWTYNVMINGLCKKGLFDEALALL 415
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 128/312 (41%), Gaps = 43/312 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Y G ++ ++G + I+F L+ C + Y+ +LF +
Sbjct: 51 LMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYE--ALLFHDHVVA 108
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D++SY +L+ C G + A+++L + V V Y+T+++ L K +
Sbjct: 109 HGFKLDQVSYAILMNGLCKMGETRAAMQMLRK---TWVNADVVMYSTIIDSLCKGKFVTD 165
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI---------------------------TNTYGG--- 251
A RL+SEM KG+ +V +++ + TYG
Sbjct: 166 AYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMD 225
Query: 252 ------DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ + + M G++P+ YN ++ CK + +DEA +++ + +P
Sbjct: 226 GYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINP 285
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ I LC G + ++ E + K D T L+ L K + +A ++
Sbjct: 286 DVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLV 345
Query: 366 RTIKKK-FPPNV 376
+ IK + PNV
Sbjct: 346 KEIKDQGIQPNV 357
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESH--KNDPKITQEP 98
+KAL+I++ + + P + + ++ + L K KR + L E H K +P +
Sbjct: 234 NKALNIFNVMVQEGVEP--NVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYN 291
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L I + G ++ D+M +G +I++N+LL A ++ D+ L EI
Sbjct: 292 IL---IDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + P+ +Y L+ C G + A + E+ +G +T TY ++N L K+G
Sbjct: 349 -KDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGL 407
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRI 245
+EA L S ME D +Y I
Sbjct: 408 FDEALALLSRMEDNACIPDAVSYETII 434
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 116/290 (40%), Gaps = 37/290 (12%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN-LSPDKISYGLLLKSHCDS 181
M ++ ++ FN +L + + Y LF ++ ++N + P ++ +L+ +C +
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQL--EFNGIKPSIVTLTILMNCYCHT 58
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G +L ++ G E ++T+TT++ + G A EA + G LD +Y
Sbjct: 59 GGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSY 118
Query: 242 NVRITNT-----------------YGGDPERLKELID----------------EMRDAGL 268
+ + D +ID EM G+
Sbjct: 119 AILMNGLCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGI 178
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ +++ L+ CK+ +A + + + G PN T+ + C +KA
Sbjct: 179 FPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALN 238
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+F V P+ +++ GL KKK++ EA + + + KK P+V+
Sbjct: 239 IFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R ++G A FD+M G P +V++FN L+ ++ + L + K
Sbjct: 250 LMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANAL-RGLMAKA 308
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++PD +YG ++ C +G A+E+ EM +GV TV +TT+++ K+GN
Sbjct: 309 GVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAG 368
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM +G+ D+ AYN D + ++++EMR+ GLKPD ++Y L+
Sbjct: 369 LELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDG 428
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK +D A ++ + + + G + + T+ T I L SG + ++ E + PD
Sbjct: 429 FCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPD 488
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T ++++ K +K +++ ++ K
Sbjct: 489 NTTYTMVIDAFCKNSDVKTGFKLLKEMQNK 518
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 5/298 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ L K+ R D + E + LI ++ + G + +
Sbjct: 315 YTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHRE 374
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++++NAL R R + +E+ + L PDK++Y L+ C G
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEM-RNNGLKPDKVTYTTLIDGFCKEG 433
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D A+E+ EM ++GV + VTYTT+++ L K G + ++ER+ EM + G++ D Y
Sbjct: 434 ELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYT 493
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I D + +L+ EM++ G KP ++YN +M +C M A + +
Sbjct: 494 MVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNI 553
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
G P+ T+ + C G A ++ MV DF L+ VKKK K
Sbjct: 554 GVCPDDITYNILLDGHCKHGKVRDAEELKSAKGMVS---DFGLYTSLINEFVKKKSTK 608
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 14/227 (6%)
Query: 145 SRLYDKVPILFDEIPKKY---------NLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
S L +++P +P+ Y + P+ + +L++ SG A + +EM
Sbjct: 216 SDLMNRLP----SVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEML 271
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPE 254
+GV T VT+ T+++ + K + A L M K GV DV Y + G +
Sbjct: 272 RRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQ 331
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
E+ +EMR+ G+ P+T+ + L+ +CK + +++ + G + +
Sbjct: 332 DAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALA 391
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
LC + A + +E PD T L++G K+ ++ A
Sbjct: 392 NGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMA 438
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 10/339 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A ++ + + + P + Y L + L SKR+ D+E L + E
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLL--KGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LIR + + GM + A++ +QM E G + N ++ + C + R+ D +L D
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM--G 345
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y +PD ISY +LK C + D A ELLNEM VT+ T + L ++G E
Sbjct: 346 SYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIE 405
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A L +M + G + V YN + G + EL R KP+TI+Y L+
Sbjct: 406 QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLL 462
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T C E +D A ++ + C PN TF + C G ++A ++ ++ +
Sbjct: 463 TGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCT 522
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
P+ T L++G+ K ++A ++ + K P+V+
Sbjct: 523 PNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVI 561
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 6/295 (2%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELG 127
+RRL + + L+E + + YLC LIR+ + G A R + G
Sbjct: 47 LRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 106
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+P V ++N L+ R D L +P ++PD +Y L++ CD G A
Sbjct: 107 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVADA 162
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L LL++M +G + VTYT +L + + E+A + EM KG ++ YNV I
Sbjct: 163 LSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIING 222
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + +EL++ + G +PDT+SY L+ C ++ D+ ++++ + E C PN
Sbjct: 223 MCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 282
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
TF I C G ++A +V ++ + +++ + K+ ++ +A
Sbjct: 283 EVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDA 337
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 165/361 (45%), Gaps = 19/361 (5%)
Query: 16 AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
++TT +I ++ + R D A + + + + +P + Y L + L ++
Sbjct: 313 GCATNTTLCNIVINSICKQGRV----DDAFKLLNDMGSYGCNPDTISYTTVL--KGLCRA 366
Query: 76 KRFSDIETLIES--HKNDP--KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
+R+ D + L+ N P ++T ++C L Q G+ + A+ +QM E G
Sbjct: 367 ERWDDAKELLNEMVRNNCPPNEVTFNTFICILC----QKGLIEQAIMLIEQMSEHGCTVG 422
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++NAL+ D LF +P K P+ I+Y LL C++ D A EL+
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMPCK----PNTITYTTLLTGLCNAERLDGAAELV 478
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
EM VT+ +++ ++G EEA L +M + G ++ YN + T
Sbjct: 479 AEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKD 538
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
E EL+ + G+ PD I+++ ++ K + ++EA +++ +++ G P A +
Sbjct: 539 CSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVY 598
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ LC D A F V +P+ +T +L+EGL + +KEA+ ++ +
Sbjct: 599 NKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCS 658
Query: 371 K 371
+
Sbjct: 659 R 659
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 123/276 (44%), Gaps = 4/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + F+ AM D+M G +++++N ++ R D L + +P Y
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS-Y 242
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +SY LLK C S D EL EM K VT+ ++ + G E A
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ +M + G + N+ I + G + +L+++M G PDTISY ++
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ E D+AK++ + N C PN TF T+I LC G ++A + ++
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
T LV G + I A + R++ K PN +
Sbjct: 423 VVTYNALVNGFCVQGHIDSALELFRSMPCK--PNTI 456
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 17/193 (8%)
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
T ++ L ++G +A R+ E G +DV AYN + G + + LI M
Sbjct: 80 TKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV 139
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
A PD +Y L+ C + +A + + + GC PN T+ + +C + F++
Sbjct: 140 A---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQ 196
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL------- 377
A V E P+ T +++ G+ ++ ++ +A+ ++ R F P+ +
Sbjct: 197 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLK 256
Query: 378 -----RAWKKVEE 385
+ W VEE
Sbjct: 257 GLCASKRWDDVEE 269
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 11/326 (3%)
Query: 59 VSSRYAQD-----LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMF 113
VS+R+ D + V+ L R D L+E + L+ +
Sbjct: 66 VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 125
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ + M E G +V+++N+++ R+R D+ +++ + PD I+Y
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE-GCHPDIITYTA 184
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C S + LELL E+ +G VTY+TV++ L K G +A ++ EM
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAP 244
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ YN I GD + L+ +M D PD ++Y LM+ +CK +D+A
Sbjct: 245 TAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++++ + N SP+ TF + + LCG G + A ++ +E P T +V+G
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 361
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVL 377
K ++++A+ ++ + + F PN +
Sbjct: 362 CKANQVRKAEELVADFRSRGFVPNTV 387
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 13/327 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP-KITQEP 98
D + L++ V++ +P Y+ + L K+ R D + E P IT
Sbjct: 194 DVGRGLELLGEVTRRGFTPDIVTYST--VIDGLCKAGRLRDAVDIFEEMSCAPTAITYN- 250
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+LI Y +AG D A+R +M + V+++ L+ A C RL D +
Sbjct: 251 ---SLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K LSPD +++ L+ C G + ALELL E+ +G T TY V++ K
Sbjct: 308 VANK--LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKAN 365
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMR-DAGLKPDTIS- 274
+AE L ++ +G + YN+ + G ++ + +D++ + G P +++
Sbjct: 366 QVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAM 425
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y ++ C++ D+A + YE + + G P A TF T ++ LC + +A+++ +E +
Sbjct: 426 YAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMI 485
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P T +V + I++A
Sbjct: 486 KYGHTPGPGTCDAVVSAYCRAGMIQKA 512
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 81/190 (42%), Gaps = 5/190 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ AL++ +++ P + Y + V K+ + E L+ ++ +
Sbjct: 333 EDALELLEEITRRGCPP--TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYN 390
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG--TPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L+ +AG D A++ DQ++ G P SV + +L A R D ++E+
Sbjct: 391 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 450
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ P ++ ++ + C + +A ELL EM G T V++ + G
Sbjct: 451 QR-GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMI 509
Query: 220 EEAERLWSEM 229
++A+ L SE+
Sbjct: 510 QKADELASEL 519
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG A R +M++ G +++ L+ C ++ + + + K+
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR 455
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P+ ++Y L C G A ELL+EM +KG+E+ TY +++N L K GN E+
Sbjct: 456 --VTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQ 513
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R +M++ G+ DV Y I + +R L+ EM D G+KP ++YN LM
Sbjct: 514 AMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C + ++ K++ E + E PN TT+ + + C N +++K + +P
Sbjct: 574 GFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ NT +L++G K + +KEA
Sbjct: 634 NENTYNILIKGHCKARNMKEA 654
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 136/280 (48%), Gaps = 14/280 (5%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
I+ P CN + D A++ F ++ E ++ S+N LL A CT R+ D
Sbjct: 222 ISPSPESCNAVLCRLP---LDEAVQLFQELPE----KNTCSYNILLKALCTAGRIKDAHQ 274
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LFDE+ PD ++YG+++ +C + A++LL+EM +G+E+ V YT+V+
Sbjct: 275 -LFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIAL 329
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L +G +A R+ +M GV LD A + ++ GD + DEM+ GL D
Sbjct: 330 LCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAAD 389
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++Y L+ C+ + EA++V + +E+ G +A T+ I C G +A+ V
Sbjct: 390 GVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHN 449
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ V P+ T L +GL K+ + A ++ + K
Sbjct: 450 KMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 156/372 (41%), Gaps = 49/372 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + P + + ++ ++ L + R D L + + P + +
Sbjct: 239 DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIM- 291
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+ Y + A++ +M G + +++ +++ C ++ D V ++ D +
Sbjct: 292 --VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV-- 347
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + D + ++ C G A +EM+ +G+ VTYT ++N L + G +
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN---------------------------TY---- 249
EAER+ EME KG+D+D Y V I TY
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467
Query: 250 -----GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
GD EL+ EM GL+ + +YN L+ CK +++A + ++E G
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ T I LC S D+A+ + +E + P T +L+ G +++ K +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 365 IR-TIKKKFPPN 375
+ ++K PN
Sbjct: 588 LEWMLEKNIHPN 599
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 6/216 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +AG + AMRT MDE G V ++ ++ A +S+ D+ L E+ K
Sbjct: 500 SLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P ++Y +L+ C SG + LL M K + T TY +++ + N +
Sbjct: 560 -GIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
++ M + V + YN+ I +KE + EM + G + SYN L
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKA--RNMKEALYFHSEMIEKGFRLTASSYNAL 676
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ K + EA++++E + + + + +I
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + +G + R + M E + ++N+L+ C + I + ++
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P++ +Y +L+K HC + + +AL +EM KG +T +Y ++ L K+ E
Sbjct: 631 --VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
A RL+ +M K+ + + YN I ++ D E L DE+ + L
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTL 736
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 152/301 (50%), Gaps = 5/301 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPK--ITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+A R D+ + +E H+ + ++ Y LI + + G D A R FD+M +
Sbjct: 447 IAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSV 506
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+ ++FN ++ R K L+D++ + L+PD +Y L+ C + + KA
Sbjct: 507 VPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDR-GLTPDNYTYRSLISVLCLTLGAMKAK 565
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
E ++++EN V + + + TT++ K+G E +W EM +GV LD+ ++ V +
Sbjct: 566 EFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAA 625
Query: 249 YG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
D E++ L EM++ G+KPD + + ++ + K E + +A ++ + +GCSPN
Sbjct: 626 LKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNV 685
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I HLC SG A + +E ++ +P+ T ++ L + ++++AK + T
Sbjct: 686 VTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHAT 745
Query: 368 I 368
I
Sbjct: 746 I 746
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 5/272 (1%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P + ++ + +R G D A R + ELG ++ + NAL+ + R + +
Sbjct: 298 PSVASCSFMVDGLRKRGH---IDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREA 354
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
LF + + L P++++Y +L+ S C G D AL + + M KG+ VT Y +++N
Sbjct: 355 ERLFRGMANR-GLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLIN 413
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKP 270
+ N +A L +EM +KG+ A+Y+ I GD EL EM G+
Sbjct: 414 GYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSG 473
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ ++ L++ +CK+ MDEA ++++ + ++ PN TF I C GN KA++++
Sbjct: 474 NVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+ V PD T + L+ L +AK
Sbjct: 534 DQMVDRGLTPDNYTYRSLISVLCLTLGAMKAK 565
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 138/312 (44%), Gaps = 13/312 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLA----KSKRFSDIETLIESHKNDPKITQEP 98
KA +Y + +P + Y ++V L K+K F D +N+ +
Sbjct: 528 KAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVD------DLENNCVVLNSF 581
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L L+ + + G +D+M G +ISF +++A + +K+ +LF E+
Sbjct: 582 SLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREM 641
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+K + PD + + ++ H + +AL ++M G VTYT ++N L K G
Sbjct: 642 KEK-GVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGY 700
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
A+ L EM + YN + G+ E+ K L + + G +T+++N
Sbjct: 701 LSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNT 759
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +CK + A + + E+G P+ ++ T I LC G+ +KA++++ E +
Sbjct: 760 LIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKG 819
Query: 338 KIPDFNTVKLLV 349
PD +L+
Sbjct: 820 LKPDIVAYNILI 831
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 125/271 (46%), Gaps = 8/271 (2%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKY 162
IR+Y + D A +M+ G S + +N L++ C +R+ + V + + +
Sbjct: 202 IRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVER-- 259
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D+++Y L+ C + + ALE+ ++M + + + + +++ L K+G+ ++A
Sbjct: 260 GIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA 319
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
RL + + G+ ++ A N I R +E L M + GL+P+ ++Y L+
Sbjct: 320 FRLACHLGELGMVPNLFACNALIDKL--CKDRRFREAERLFRGMANRGLEPNEVTYAILI 377
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK MMD+A +++ + E G + + I C NF +A + E V
Sbjct: 378 HSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLA 437
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P + L+ GL +K + A + R + +
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMAR 468
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 10/239 (4%)
Query: 138 LLFACTRSRLYDKVPILFDEIPK-KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+LFA + R + LFDE+ + K+ L D+ Y ++++C+ + D A LL ME+
Sbjct: 166 ILFALIKIRQFALARDLFDEMVQCKFPL--DEYVYTAGIRAYCEIRNLDGARGLLTRMES 223
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GD 252
KGV+ + V Y ++ L + EA + + M ++G+ D Y T YG +
Sbjct: 224 KGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYR---TLVYGFCRTEE 280
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
E E+ D+M P S +F++ K +D+A ++ L E G PN
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNA 340
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I LC F +A ++F+ P+ T +L+ L K+ + +A + +++K
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV--- 243
A ++L + G+ + T + +L L K A L+ EM + LD Y
Sbjct: 144 AADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIR 203
Query: 244 ---RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
I N G + L+ M G+K + YN LM C+N + EA +V + E
Sbjct: 204 AYCEIRNLDGA-----RGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVE 258
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G + T+RT +Y C + + A ++ + + +H +P + +V+GL K+ I +
Sbjct: 259 RGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDK 318
Query: 361 A 361
A
Sbjct: 319 A 319
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 127 GTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G + ++FN L+ C ++ + ++ + + PD ISY ++ C G +
Sbjct: 749 GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGF--FPDCISYSTIINELCKVGDIN 806
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
KA +L NEM KG++ V Y ++ G ++ ++S+M
Sbjct: 807 KAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 151/319 (47%), Gaps = 42/319 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+++ Q F AMR +M E G + +N+L+ ++++ D+ E+ +
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN- 516
Query: 163 NLSPDKISYGLLLKSHCDS---GSSDKALE----------------LLNE---------- 193
L P+ +YG + + ++ S+DK ++ L+NE
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 194 ------MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
M ++G+ TYT ++N L+K ++AE ++ EM KG+ DV +Y V I
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G+ ++ + DEM + GL P+ I YN L+ +C++ +++AK++ + + G PN
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A T+ T I C SG+ +A+++F E + +PD LV+G + ++ A +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 367 TIKK-----KFPPNVLRAW 380
T KK P N L W
Sbjct: 757 TNKKGCASSTAPFNALINW 775
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 7/258 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A FD+M E G +VI +N LL RS +K L DE+ K
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK- 691
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++Y ++ +C SG +A L +EM+ KG+ + YTT+++ + + E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGL----KPDTISYNF 277
++ KKG A +N I + G E E+++ + D KP+ ++YN
Sbjct: 752 ITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK ++ AK+++ ++ P T+ + + G + + VF E++
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 338 KIPDFNTVKLLVEGLVKK 355
PD +++ +K+
Sbjct: 871 IEPDHIMYSVIINAFLKE 888
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 12/291 (4%)
Query: 94 ITQEPYL---CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
I +PY+ C + S + G+ + A FD M G ++ +L+ R + +
Sbjct: 343 INIKPYMYDCCICVMS--KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
L E+ KK N+ +YG ++K C SG D A ++ EM G V YTT++
Sbjct: 401 GYELLVEM-KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAG 267
+ +A R+ EM+++G+ D+ YN I +R+ E + EM + G
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL--SKAKRMDEARSFLVEMVENG 517
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
LKP+ +Y ++ Y + A K + + E G PN I C G +A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
++ V + D T +L+ GL K K+ +A+ + R ++ K P+V
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L P K +Y +L+ C + A LL EM++ GV + TY+ +++ L K NA+ A+
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 224 RLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L EM G+++ Y+ I + G E+ K L D M +GL P +Y L+ Y
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ + + + ++ +++ + T+ T + +C SG+ D AY + KE + P+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L++ ++ + +A V++ +K++ P++
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 15/276 (5%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C +I Y ++G A R FD+M G + L+ C R ++ +F
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TN 758
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV----TTVTYTTVLNCLYKQ 216
K + + L+ G ++ E+LN + + + VTY +++ L K+
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTIS 274
GN E A+ L+ +M+ + V Y + N Y G + + DE AG++PD I
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYT-SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGL-----EENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
Y+ ++ + K M +A + + + ++GC + +T R + G + A KV
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 330 FKESVMVHKIPDFNTV-KLLVEGLVKKKKIKEAKGV 364
+ V + IPD TV +L+ E + + EA V
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 77 RFSDIE---TLIESHKNDPKITQEPY--LCNLIRSYGQAGMFDHAM-RTFD-QMDELGTP 129
R +D+E T+ ++K + P+ L N + +G+ + + R D D G P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 130 RSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V ++N ++ + C L + LF ++ + NL P I+Y LL + G +
Sbjct: 804 NDV-TYNIMIDYLCKEGNL-EAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVD 235
+ +E G+E + Y+ ++N K+G +A L +M K VD
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 151/319 (47%), Gaps = 42/319 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+++ Q F AMR +M E G + +N+L+ ++++ D+ E+ +
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN- 516
Query: 163 NLSPDKISYGLLLKSHCDS---GSSDKALE----------------LLNE---------- 193
L P+ +YG + + ++ S+DK ++ L+NE
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEA 576
Query: 194 ------MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
M ++G+ TYT ++N L+K ++AE ++ EM KG+ DV +Y V I
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G+ ++ + DEM + GL P+ I YN L+ +C++ +++AK++ + + G PN
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A T+ T I C SG+ +A+++F E + +PD LV+G + ++ A +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 367 TIKK-----KFPPNVLRAW 380
T KK P N L W
Sbjct: 757 TNKKGCASSTAPFNALINW 775
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 7/258 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A FD+M E G +VI +N LL RS +K L DE+ K
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK- 691
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++Y ++ +C SG +A L +EM+ KG+ + YTT+++ + + E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGL----KPDTISYNF 277
++ KKG A +N I + G E E+++ + D KP+ ++YN
Sbjct: 752 ITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK ++ AK+++ ++ P T+ + + G + + VF E++
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 338 KIPDFNTVKLLVEGLVKK 355
PD +++ +K+
Sbjct: 871 IEPDHIMYSVIINAFLKE 888
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 12/291 (4%)
Query: 94 ITQEPYL---CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
I +PY+ C + S + G+ + A FD M G ++ +L+ R + +
Sbjct: 343 INIKPYMYDCCICVMS--KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
L E+ KK N+ +YG ++K C SG D A ++ EM G V YTT++
Sbjct: 401 GYELLVEM-KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAG 267
+ +A R+ EM+++G+ D+ YN I +R+ E + EM + G
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL--SKAKRMDEARSFLVEMVENG 517
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
LKP+ +Y ++ Y + A K + + E G PN I C +A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEAC 577
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
++ V + D T +L+ GL K K+ +A+ + R ++ K P+V
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L P K +Y +L+ C + A LL EM++ GV + TY+ +++ L K NA+ A+
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 224 RLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L EM G+++ Y+ I + G E+ K L D M +GL P +Y L+ Y
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ + + + ++ +++ + T+ T + +C SG+ D AY + KE + P+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L++ ++ + +A V++ +K++ P++
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 15/276 (5%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C +I Y ++G A R FD+M G + L+ C R ++ +F
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TN 758
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV----TTVTYTTVLNCLYKQ 216
K + + L+ G ++ E+LN + + + VTY +++ L K+
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTIS 274
GN E A+ L+ +M+ + V Y + N Y G + + DE AG++PD I
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYT-SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGL-----EENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
Y+ ++ + K M +A + + + ++GC + +T R + G + A KV
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 330 FKESVMVHKIPDFNTV-KLLVEGLVKKKKIKEAKGV 364
+ V + IPD TV +L+ E + + EA V
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 77 RFSDIE---TLIESHKNDPKITQEPY--LCNLIRSYGQAGMFDHAM-RTFD-QMDELGTP 129
R +D+E T+ ++K + P+ L N + +G+ + + R D D G P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 130 RSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V ++N ++ + C L + LF ++ + NL P I+Y LL + G +
Sbjct: 804 NDV-TYNIMIDYLCKEGNL-EAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVD 235
+ +E G+E + Y+ ++N K+G +A L +M K VD
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 151/319 (47%), Gaps = 42/319 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+++ Q F AMR +M E G + +N+L+ ++++ D+ E+ +
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN- 516
Query: 163 NLSPDKISYGLLLKSHCDS---GSSDKALE----------------LLNE---------- 193
L P+ +YG + + ++ S+DK ++ L+NE
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 194 ------MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
M ++G+ TYT ++N L+K ++AE ++ EM KG+ DV +Y V I
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G+ ++ + DEM + GL P+ I YN L+ +C++ +++AK++ + + G PN
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A T+ T I C SG+ +A+++F E + +PD LV+G + ++ A +
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG 756
Query: 367 TIKK-----KFPPNVLRAW 380
T KK P N L W
Sbjct: 757 TNKKGCASSTAPFNALINW 775
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 7/258 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A FD+M E G +VI +N LL RS +K L DE+ K
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK- 691
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++Y ++ +C SG +A L +EM+ KG+ + YTT+++ + + E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGL----KPDTISYNF 277
++ KKG A +N I + G E E+++ + D KP+ ++YN
Sbjct: 752 ITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK ++ AK+++ ++ P T+ + + G + + VF E++
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 338 KIPDFNTVKLLVEGLVKK 355
PD +++ +K+
Sbjct: 871 IEPDHIMYSVIINAFLKE 888
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 128/291 (43%), Gaps = 12/291 (4%)
Query: 94 ITQEPYL---CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
I +PY+ C + S + G+ + A FD M G ++ +L+ R + +
Sbjct: 343 INIKPYMYDCCICVMS--KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
L E+ KK N+ +YG ++K C SG D A ++ EM G V YTT++
Sbjct: 401 GYELLVEM-KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAG 267
+ +A R+ EM+++G+ D+ YN I +R+ E + EM + G
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL--SKAKRMDEARSFLVEMVENG 517
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
LKP+ +Y ++ Y + A K + + E G PN I C G +A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
++ V + D T +L+ GL K K+ +A+ + R ++ K P+V
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L P K +Y +L+ C + A LL EM++ GV + TY+ +++ L K NA+ A+
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 224 RLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L EM G+++ Y+ I + G E+ K L D M +GL P +Y L+ Y
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ + + + ++ +++ + T+ T + +C SG+ D AY + KE + P+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L++ ++ + +A V++ +K++ P++
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 15/276 (5%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C +I Y ++G A R FD+M G + L+ C R ++ +F
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TN 758
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV----TTVTYTTVLNCLYKQ 216
K + + L+ G ++ E+LN + + + VTY +++ L K+
Sbjct: 759 KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTIS 274
GN E A+ L+ +M+ + V Y + N Y G + + DE AG++PD I
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYT-SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGL-----EENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
Y+ ++ + K M +A + + + ++GC + +T R + G + A KV
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 330 FKESVMVHKIPDFNTV-KLLVEGLVKKKKIKEAKGV 364
+ V + IPD TV +L+ E + + EA V
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 77 RFSDIE---TLIESHKNDPKITQEPY--LCNLIRSYGQAGMFDHAM-RTFD-QMDELGTP 129
R +D+E T+ ++K + P+ L N + +G+ + + R D D G P
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 130 RSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V ++N ++ + C L + LF ++ + NL P I+Y LL + G +
Sbjct: 804 NDV-TYNIMIDYLCKEGNL-EAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVD 235
+ +E G+E + Y+ ++N K+G +A L +M K VD
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 148/279 (53%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S + + + A+ F M +G +V+++N+L++ S + + ILF E+ ++
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEM-LEW 308
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ PD +++ +L+ + C G +AL + +M +E VTY+++++ + K +E+
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKES 368
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +EM + + DV +++ + G + +I+ M + GL+P+ ++YN LM
Sbjct: 369 STLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDG 428
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--I 339
YC + MDEA+KV++ + GC+P+ ++ I C S D+A ++F E M HK
Sbjct: 429 YCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDE--MSHKGLT 486
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
P+ T L+ GL + + AK + + + PP+++
Sbjct: 487 PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 148/280 (52%), Gaps = 11/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G+ A+ F +M ++ ++++++L+ +S L+ + L +E+ +
Sbjct: 320 LVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR- 378
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CLYKQGNAE 220
N+ PD +++ + + C G +A ++N M +G+ VTY ++++ CL+ Q +
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQ--MD 436
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNF 277
EA +++ M KG DV +YN+ I ER+ K+L DEM GL P++I++
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGY--CKSERIDEAKQLFDEMSHKGLTPNSITHTT 494
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L++ C+ AK++++ + +GC P+ T+ T + C G+ D+A +F+
Sbjct: 495 LISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQ 554
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
P+ K+L+ G+ K K+++AK + ++ ++ P+V
Sbjct: 555 LKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 3/272 (1%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
G FD A+ F+QM + + FN LL A R + YD V ++ ++ + + +S
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKM-EFFGVSCS 138
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+ +L+ C +L ++ G + + +T+ T++N L +G EA
Sbjct: 139 VYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLD 198
Query: 228 EMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
+ +G V + + + G + +M + +P+ +SY+ ++ CKN
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+++EA ++ + G SP T+ + IY +C SG + +A +FKE + + PD T
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFS 318
Query: 347 LLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+LV+ L K+ + EA V + I+ P+++
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ Y D A + FD M G V+S+N L+ +S D+ LFDE+ K
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+P+ I++ L+ C +G A EL +M + G +TY+T+L+ K G+ +E
Sbjct: 484 -GLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDE 542
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDT 272
A L+ ++K + + + + G E KEL + L+PD
Sbjct: 543 ALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 134/252 (53%), Gaps = 2/252 (0%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
++ +LG +V ++NAL+ ++ +D LF E+ + L P++++Y +L+ + C
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKR 386
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G + AL L ++M +KG++VT Y +++N KQG+ + A L S M K+G+ A+Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ I GD EL EM + G+ + ++ L+ +CK++ MDEA ++++ + +
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+ PN TF I C GN KA++++ + V + PD T + L+ GL + +
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Query: 361 AKGVIRTIKKKF 372
A + ++ +
Sbjct: 567 ANEFVADLENSY 578
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 10/325 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPY 99
D+A + S + K +P ++ Y+ +A R D+ + +E H+ + I Y
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSP-----LIAGLCRNGDLSSCMELHREMAERGIAWNNY 479
Query: 100 -LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LI + + D A R FD+M + + ++FN ++ K L+D++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ L PD +Y L+ C + KA E + ++EN + + T +L +++G
Sbjct: 540 -VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E LW EM +GV LD+ ++ + + D E+ L EM++ G+KPD I Y
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K E M +A ++ + +G SPN T I +LC SG A + KE + +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAK 362
+P+ T ++ + +++AK
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAK 743
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 142/314 (45%), Gaps = 2/314 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V + +A + + +L K++RF D + L + E LI + + GM + A+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD+M + G +V +N+L+ + D+ L + K+ L+P SY L+
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGL 453
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C +G +EL EM +G+ T+T ++N K +EA RL+ +M V +
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+NV I G+ + +L D+M + GLKPD +Y L++ C + +A +
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
LE + N + +Y G F + Y ++ E + D + ++V +K+
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633
Query: 358 IKEAKGVIRTIKKK 371
+++ + R +K++
Sbjct: 634 KEKSCVLFREMKEQ 647
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 6/335 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA +Y + + P Y + L + S + +N + L
Sbjct: 531 KAFQLYDQMVEMGLKP--DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G F +D+M G ++SF +++A + +K +LF E+ K+
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQ 647
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I Y ++ + + +AL ++M G TVT+T ++N L K G A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM V + YN + GD E+ K+L M L +S+N L+
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKG 766
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA + + E+G SP+ ++ T I+ LC G+ +KA++++ E + PD
Sbjct: 767 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPN 375
+ + + +A G+ I+ PN
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 45/274 (16%)
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+LF+ + R + LFD++ + + D+ Y ++++C+S + D A L+ ME++
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQS-GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE 227
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--------------- 242
GV+ + V Y ++ L K +EA + + M GV D Y
Sbjct: 228 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 243 VRITN--------------TYGGDPERLKELIDE-------MRDAGLKPDTISYNFLMTC 281
+RIT+ ++ D R KEL++E + D G+ P+ +YN L+
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF----KESVMVH 337
CKNE D+A ++++ + G PN T+ I+ LC G + A +F + + V
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P +N+ L+ G K+ + A+G++ + K+
Sbjct: 408 VYP-YNS---LINGYCKQGSLDRARGLLSGMVKE 437
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+S+ +L+K C +G +A++L++++ G ++Y+T+++ L K G+ +A LW+E
Sbjct: 758 VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNE 817
Query: 229 MEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
M KG+ DV AYN +R N +G + L + +R +G++P+ +Y L++
Sbjct: 818 MLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR-SGVQPNWDTYRALLS 870
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPE 254
+ G+ V T + +L L K A L+ +M + GV LD Y I + +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ L+ M G+K + YN LM CKN + EA +V + G + + T+RT +
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
Y C + A ++ + + + +P +++ L KK+ ++EA
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G S++SFN L+ ++ + L +I + SPD ISY ++ C G +K
Sbjct: 752 GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITES-GFSPDCISYSTIIHELCKMGDINK 810
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A EL NEM KG++ V Y + G +++A +++ M + GV + Y ++
Sbjct: 811 AFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870
Query: 247 N 247
Sbjct: 871 G 871
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 142/279 (50%), Gaps = 6/279 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPK 160
+++R AG A+ F +M + P SV ++N ++ ++S RL D + +L + +
Sbjct: 201 SILRGLCDAGQCSDAVLHFREMSKTCPPDSV-TYNTMINGLSKSDRLDDAIRLLEEMVDN 259
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ +P+ SY +L C + + AL LL +M +G V+YTTV+N L K +
Sbjct: 260 GF--APNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVD 317
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA R+ +M ++G +V Y + GD + EL+ +M + G +P+ I+YN +M
Sbjct: 318 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 377
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+ M+ A +V + + + GC P+A + T I C +G +A+ + ++ +
Sbjct: 378 HVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR 437
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD + L++ L K I A+ ++R +I P+V+
Sbjct: 438 PDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVV 476
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 11/286 (3%)
Query: 94 ITQEPYLCNLIRSYGQAGMF------DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSR 146
+ ++ Y+ NL MF + A + M + G +V+S+N ++ C ++
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+++ V +L E N PD +++ ++ + C + D A EL N ++ G VTY
Sbjct: 1139 VHEGVLLL--EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 1196
Query: 207 TTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMR 264
++++ L K ++AE L EM K+G D+ YN I +R +L +M
Sbjct: 1197 NSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 1256
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
GL PD ++Y+ +++ CK MDEA V E + +NG P A T+ T I C +GN D
Sbjct: 1257 SDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLD 1316
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
KA ++ + + PD T + ++ L K+ ++++A ++ T+ +
Sbjct: 1317 KALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 1362
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 1/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A +M G P++VI N ++ +R D LF E+ +
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++ S SG D A L+ +M +KG VTY+++L+ L K G +EA
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M + G ++ YN I + G + L++EM D G +P+ ++Y L+
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 1062
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK ++A + E + E G PN T+ + + C ++A ++ + +P+
Sbjct: 1063 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 1122
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+ ++ GL K K+ E
Sbjct: 1123 VVSYNTVIAGLCKATKVHEG 1142
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 159/343 (46%), Gaps = 14/343 (4%)
Query: 41 PDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK--ITQEP 98
P AL +Y + K SP + + + + L ++ DI T E K P+ + Q
Sbjct: 860 PKDALQVYRN--KLCCSP--NMFTFTILIHGLCRA---GDIGTAYELLKEMPRHGVPQNV 912
Query: 99 YLCNL-IRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFD 156
L N+ I+ A D A+ F +M+E G+ P V +++ ++ + +S D L +
Sbjct: 913 ILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 972
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
++ K SP+ ++Y LL C +G D+A LL M G VTY T+++ K
Sbjct: 973 DMVSK-GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKL 1031
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISY 275
G +EA L EM G +V Y V + G E L++ M + G P+ +Y
Sbjct: 1032 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 1091
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ +CK + ++ A ++ + + GC PN ++ T I LC + + + ++ +
Sbjct: 1092 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 1151
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ +PD T +++ + K ++ A + I++ PN++
Sbjct: 1152 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 6/273 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N++ + + + A + M + G P I+++ ++ ++ + L +++ ++
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD L+ + C + + D A ELL V Y+ +++ L K E
Sbjct: 435 -GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPE 493
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
AE M K DV YN + R+ + L D MR AG+ PD ++Y+ +
Sbjct: 494 AESWLDVMVKNRCYPDVVTYNSVVDGLC--KSRRINDAFLLFDRMRAAGVMPDVVTYSIV 551
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK+ +D A K+ E ++E C P+ T+ I LC +G DKA+ VF+E +
Sbjct: 552 IHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGC 611
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T L++GL K K+++A ++ ++K+
Sbjct: 612 APNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 161/377 (42%), Gaps = 46/377 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEP 98
D AL+++ + + + P + V L KS + D L+E S P +
Sbjct: 929 DSALELFKEMEESGSCP-PDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYS 987
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+L+ +AG D A +M G +++++N ++ + D+ L +E+
Sbjct: 988 ---SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 1044
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
P+ ++Y +LL + C G ++ A+ L+ M KG TY ++L+ K+
Sbjct: 1045 VDG-GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 1103
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRI--------------------TNTYGGDPERLKE 258
E A +L S M +KG +V +YN I +N D
Sbjct: 1104 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 1163
Query: 259 LIDEM----------------RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLEEN 301
+ID M +++G P+ ++YN L+ CK+ D+A+ + E +
Sbjct: 1164 IIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GCSP+ T+ T I LC S D+AYK+F + + PD T +++ L K + + EA
Sbjct: 1224 GCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEA 1283
Query: 362 KGVIR-TIKKKFPPNVL 377
V+ +K F P +
Sbjct: 1284 NNVLELMLKNGFDPGAI 1300
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 38/312 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A + SS+ + P Y + + L K+ + + L+E ++ +
Sbjct: 1105 ERACQLLSSMIQKGCVPNVVSY--NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 1162
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + + D A F+ + E G +++++N+L+ +SR +D+ L E+ +K
Sbjct: 1163 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD I+Y ++ C S D+A +L +M + G+ VTY+ V++ L K +E
Sbjct: 1223 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 1282
Query: 222 AERLWSEMEKKGVD------------------LDVAAYNVRITNTYGGDPE--------- 254
A + M K G D LD A +++ + G P+
Sbjct: 1283 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 1342
Query: 255 ------RLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
RL+ EL++ M AGL PDT++YN L+ +C + ++A ++E + + GC P
Sbjct: 1343 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEP 1402
Query: 306 NATTFRTWIYHL 317
+ T+ T + HL
Sbjct: 1403 DNATYTTLVGHL 1414
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 133/308 (43%), Gaps = 6/308 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ ++S L S LI + +AG A FD+M+ G
Sbjct: 136 LVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAH 195
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++L C + D V + F E+ K PD ++Y ++ S D A+ L
Sbjct: 196 AGVHKSILRGLCDAGQCSDAV-LHFREMSK--TCPPDSVTYNTMINGLSKSDRLDDAIRL 252
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L EM + G +Y TVL+ K E A L +M +G DV +Y I
Sbjct: 253 LEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCK 312
Query: 251 GDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
D + ++D+M G +P+ I+Y L+ +C+ +D A ++ + E G PNA T
Sbjct: 313 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 372
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTI 368
+ ++ C + ++A++V + + PD ++ G K K++EA ++ + I
Sbjct: 373 YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMI 432
Query: 369 KKKFPPNV 376
++ P+V
Sbjct: 433 RRGCRPDV 440
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +AG A +QM G V + L+ A ++ D L +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL-RMSIGM 469
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +PD ++Y +L+ + C + +A L+ M VTY +V++ L K +A
Sbjct: 470 DCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDA 529
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ M GV DV Y++ + +++ D + ++++ M++A PD ++Y+ L+
Sbjct: 530 FLLFDRMRAAGVMPDVVTYSI-VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALIN 588
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D+A V++ + GC+PN T+ T I LC ++A ++ + P
Sbjct: 589 GLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTP 648
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T L+ GL +++EA V+R +K K
Sbjct: 649 DSITYTCLINGLCNASRLEEAWRVLREMKDK 679
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 124/272 (45%), Gaps = 4/272 (1%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
L LI + +A D A + V++++ L+ A C RL + L ++
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL--DV 500
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K PD ++Y ++ C S + A L + M GV VTY+ V++ K N
Sbjct: 501 MVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNN 560
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
+ A ++ M++ DV Y+ I G ++ ++ EM G P+ ++YN
Sbjct: 561 LDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNT 620
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK +++A ++ E + + C+P++ T+ I LC + ++A++V +E
Sbjct: 621 LIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKG 680
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+PD T L+ L K ++ + +++ ++
Sbjct: 681 CLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 33/251 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI + + G D A+ + G+ V++F+ + + R RL +L E +
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELL--ETMLR 1362
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD ++Y LLK CD+ ++ A++L M G E TYTT++ L + + ++
Sbjct: 1363 AGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKD 1422
Query: 222 AERLWSEMEKKGVD----------------LDVAAYNVR----ITNTYG--GDPERLKEL 259
L +E+ K VD ++V A +VR I + +G G P+ +++
Sbjct: 1423 ---LLAEVSKSMVDTGFKLNHELSSKLEASIEVEA-DVRLGCAIVDMFGKCGSPQDARKV 1478
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+ M + + + ++ ++ Y ++ ++A ++ + G P+A TF + + C
Sbjct: 1479 FEGMD----QRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCH 1534
Query: 320 SGNFDKAYKVF 330
+G D A F
Sbjct: 1535 AGLLDAAVDEF 1545
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G DT + N L+ + + +A +VY + CSPN TF I+ LC +G+ A
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIGTA 896
Query: 327 YKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIKK--KFPPNVL 377
Y++ KE + H +P N + ++++GL +K+ A + + +++ PP+V
Sbjct: 897 YELLKE-MPRHGVPQ-NVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVF 949
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 132/260 (50%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A R +M++ G +++ L+ + + ++ +++ +K
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK- 454
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P+ ++Y L C G A ELL+EM +KG+E+ TY +++N L K GN E+A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R +M++ G+ DV Y I + +R L+ EM D G+KP ++YN LM
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C + ++ K++ E + E PN TT+ + + C N +++K + +P+
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPN 634
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
NT +L++G K + +KEA
Sbjct: 635 ENTYNILIKGHCKARNMKEA 654
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 11/261 (4%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
D A++ F ++ E ++ S+N LL A CT R+ D LFDE+ PD ++Y
Sbjct: 238 LDEAVQLFQELPE----KNTCSYNILLKALCTAGRIKDAHQ-LFDEMASP----PDVVTY 288
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
G+++ +C + A++LL+EM +G+E+ V YT+V+ L +G +A R+ +M
Sbjct: 289 GIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM 348
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
GV LD A + ++ GD + DEM+ GL D ++Y L+ C+ + E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A++V + +E+ G +A T+ I C G +A+ V + V P+ T L +
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Query: 351 GLVKKKKIKEAKGVIRTIKKK 371
GL K+ + A ++ + K
Sbjct: 469 GLCKQGDVCAANELLHEMCSK 489
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 156/372 (41%), Gaps = 49/372 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + P + + ++ ++ L + R D L + + P + +
Sbjct: 239 DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIM- 291
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+ Y + A++ +M G + +++ +++ C ++ D V ++ D +
Sbjct: 292 --VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV-- 347
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + D + ++ C G A +EM+ +G+ VTYT ++N L + G +
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN---------------------------TY---- 249
EAER+ EME KG+D+D Y V I TY
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467
Query: 250 -----GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
GD EL+ EM GL+ + +YN L+ CK +++A + ++E G
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ T I LC S D+A+ + +E + P T +L+ G +++ K +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 365 IR-TIKKKFPPN 375
+ ++K PN
Sbjct: 588 LEWMLEKNIHPN 599
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +AG + AMRT MDE G V ++ ++ A +S+ D+ L E+ K
Sbjct: 500 SLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P ++Y +L+ C SG + LL M K + T TY +++ + N +
Sbjct: 560 -GIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
++ M + V + YN+ I +KE + EM + G + SYN L
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKA--RNMKEALYFHSEMIEKGFRLTASSYNAL 676
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ K + EA++++E + ++ + + +I
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + +G + R + M E + ++N+L+ C + I + ++
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P++ +Y +L+K HC + + +AL +EM KG +T +Y ++ L K+ E
Sbjct: 631 --VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
A RL+ +M K + + YN I ++ D E L DE+ + L
Sbjct: 689 ARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTL 736
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 12/284 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+IR +AG F A+ F + +I+FN L+ A +S ++ +F+ +
Sbjct: 70 GVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTS 129
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++Y ++ C G D+A+ELL+ M G +TY+ ++ L K G ++
Sbjct: 130 SQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
L EM ++G DV YN + RL E L+ M +G P ++YN L
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLC--KSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M +C+++ +D A ++ + + E GC P+ + T I LC D A + K+ V
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 339 IPDFNTVKLLVEGLVK------KKKIKEAKGVIRTIKKK-FPPN 375
+PD T +++GL K K++ A ++ +K+ PPN
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 145/326 (44%), Gaps = 11/326 (3%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCN 102
AL + +V+ +P + ++ V L KS R + + ES H + +
Sbjct: 84 ALGYFKTVAGTKCTPDIITF--NILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A+ D M+E G +VI+++ L+ ++ DK L E+ ++
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR- 200
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I Y LL C S D+ALEL+ M G T VTY +++ + + A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL M ++G DV YN I + + L+ +M A PD I+Y+ ++
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320
Query: 282 YCKNEMMDE------AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
CK+ +D A ++ E +++ GC PNA T+ I LC + +A + + +
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
+PD ++ +++ L K + A
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAA 406
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P++ +YG L+ C +G D+A ELL+EM ++G+ + V+ L K G +A
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87
Query: 226 WSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAG-LKPDTISYNFLMTCYC 283
+ + D+ +N+ + G E ++ + M + P+ ++Y ++ C
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K+ +D A ++ + + E GC PN T+ + LC +G DK + + +E PD
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 344 TVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
L+ GL K +++ EA +++ I+ P V+
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 152/344 (44%), Gaps = 25/344 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQE 97
DK + +++ P Y + + L KS+R + ++ +I S +T
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMY--NTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
+L+ + ++ D A R M E G P VI++N ++ C +RL D +L
Sbjct: 246 ----SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDK------ALELLNEMENKGVEVTTVTYTTVL 210
+ + PD I+Y ++ C D A E+L M+ G TY V+
Sbjct: 302 MVAAR--CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
L + +++A L M V D++++++ I + D + ++ M + K
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ ++Y L+ K +D+A +V+E + E+ P T+ + + LCG G ++A ++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 330 FKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ M+HK PD + L+ GL + ++EA + + ++ K
Sbjct: 479 VEG--MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 39/279 (13%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI +AG D A D+M + G P V N ++ C R D + + +
Sbjct: 35 SLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALG--YFKTVA 92
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV-TTVTYTTVLNCLYKQGNA 219
+PD I++ +L+ + SG ++A ++ M + VTYTTV+N L K G
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ R EL+D M + G P+ I+Y+ L+
Sbjct: 153 D----------------------------------RAIELLDLMNETGCCPNVITYSVLV 178
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK D+ + + + G P+ + T + LC S D+A ++ + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P T L+E + K++ A +I+ + ++ PP+V+
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G D A+R F+ M E P V ++N++L C R+ + V ++ I K+
Sbjct: 428 LIDGLSKGGEVDKAVRVFELMVESFRP-GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD SYG L++ C ++A EL +E KG + Y ++N L K+ +
Sbjct: 487 --CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSD 544
Query: 222 AERLWSEMEKKG 233
A + +++ + G
Sbjct: 545 AHGVANKLIEAG 556
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 9/173 (5%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL---EL 190
SF+ ++ + +S D +F + ++ P+ ++Y L+ G DKA+ EL
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSER-ECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
+ E GV TY +VL+ L G EEA R+ M K D A+Y I
Sbjct: 448 MVESFRPGV----ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
E EL + G + YN L+ CK + + +A V L E G
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G V +FN+L+ +R + LF+E+ K PD+ +Y +L+ S C G D+
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL +L +ME G + +TY T+++ K EAE ++ EME GV + YN I
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 247 NTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E +L+D+M G KPD +YN L+T +C+ + +A + + + NGC P
Sbjct: 514 GLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I LC +G + A K+ + M + +++GL +K+K EA +
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLF 633
Query: 366 RTIKKK 371
R + ++
Sbjct: 634 REMLEQ 639
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 3/302 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ ++ L ++ + ++E + + E +++ Y + G D A+R +QM E
Sbjct: 193 NVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVE 252
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G S +S N ++ C R+ D + + E+ + PD+ ++ L+ C +G
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFI-QEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
A+E+++ M +G + TY +V++ L K G +EA +M + + YN
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTL 371
Query: 245 ITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I+ + E EL + G+ PD ++N L+ C A +++E + GC
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ I LC G D+A + K+ + T L++G K KI+EA+
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEE 491
Query: 364 VI 365
+
Sbjct: 492 IF 493
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 184/434 (42%), Gaps = 81/434 (18%)
Query: 13 ATTAAGSSTTASSISVSKAK--SKLRSEFDPDKALDIYSSVSKH-YASPVSSRYAQDLTV 69
++T + +S ++++S S K LRS+ D AL +++ SK SP + Y + L
Sbjct: 33 SSTISFASPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILL- 91
Query: 70 RRLAKSKRFSDIETLIESHKNDP-KITQEPYLCNLIRSYGQAGMFDHAM----------- 117
RL +S F D+ ++E KN ++ P+L LI SY Q + D +
Sbjct: 92 -RLGRSGSFDDMRKILEDMKNSGCEMGTSPFLI-LIESYAQFELQDEILGVVHWMIDDFG 149
Query: 118 -----RTFDQMDEL--------------------GTPRSVISFNALLFACTRSRLYDKVP 152
+++M L G V +FN L+ A R+
Sbjct: 150 LKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 153 ILFDEIPKKYNLSPDK-----------------------------------ISYGLLLKS 177
++ +++P Y L PD+ +S +++
Sbjct: 210 LMLEDMP-SYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 178 HCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
C G + AL + EM N+ G T+ T++N L K G+ + A + M ++G D
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 237 DVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
DV YN I+ G+ + E +D+M P+T++YN L++ CK ++EA ++
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
L G P+ TF + I LC + N A ++F+E PD T +L++ L K
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 356 KKIKEAKGVIRTIK 369
K+ EA +++ ++
Sbjct: 449 GKLDEALNMLKQME 462
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 155/370 (41%), Gaps = 38/370 (10%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE 97
E D D AL I + + S S + ++ V K R D I+ N +
Sbjct: 237 EGDLDGALRIREQMVEFGCS--WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 98 PYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
Y N L+ +AG HA+ D M + G V ++N+++ C + + V L
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354
Query: 156 DEIPK-------KYN--------------------------LSPDKISYGLLLKSHCDSG 182
I + YN + PD ++ L++ C +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ A+EL EM +KG E TY +++ L +G +EA + +ME G V YN
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 243 VRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I + R +E+ DEM G+ ++++YN L+ CK+ +++A ++ + +
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ T+ + + H C G+ KA + + PD T L+ GL K +++ A
Sbjct: 535 GQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 362 KGVIRTIKKK 371
++R+I+ K
Sbjct: 595 SKLLRSIQMK 604
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 119/303 (39%), Gaps = 51/303 (16%)
Query: 125 ELGTPRSVISF-----------NALLFACTRSRLYDKVPI-LFDEIPKKYNLSPDKISYG 172
+L P S ISF + L RS+ D + LF+ KK N SP+ Y
Sbjct: 28 KLTPPSSTISFASPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEPALYE 87
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVT--------------------------- 205
+L SGS D ++L +M+N G E+ T
Sbjct: 88 EILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDD 147
Query: 206 ---------YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL 256
Y +LN L N + E ++M G+ DV+ +NV I R
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 257 KEL-IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L +++M GL PD ++ +M Y + +D A ++ E + E GCS + + ++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 316 HLCGSGNFDKAYKVFKE-SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFP 373
C G + A +E S PD T LV GL K +K A ++ +++ +
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 374 PNV 376
P+V
Sbjct: 328 PDV 330
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 41/215 (19%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI---- 158
LI + +A A FD+M+ G R+ +++N L+ +SR + L D++
Sbjct: 476 LIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535
Query: 159 --PKKYNLS----------------------------PDKISYGLLLKSHCDSGSSDKAL 188
P K+ + PD ++YG L+ C +G + A
Sbjct: 536 QKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITN 247
+LL ++ KG+ +T Y V+ L+++ EA L+ EM E+ D +Y +
Sbjct: 596 KLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRG 655
Query: 248 -TYGGDPERLKELID---EMRDAGLKPDTISYNFL 278
GG P ++E +D E+ + G P+ S L
Sbjct: 656 LCNGGGP--IREAVDFLVELLEKGFVPEFSSLYML 688
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 132/260 (50%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A R +M++ G +++ L+ + + ++ +++ +K
Sbjct: 396 LINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQK- 454
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P+ ++Y L C G A ELL+EM +KG+E+ TY +++N L K GN E+A
Sbjct: 455 RVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQA 514
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R +M++ G+ DV Y I + +R L+ EM D G+KP ++YN LM
Sbjct: 515 MRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG 574
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C + ++ K++ E + E PN TT+ + + C N +++K + +P+
Sbjct: 575 FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPN 634
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
NT +L++G K + +KEA
Sbjct: 635 ENTYNILIKGHCKARNMKEA 654
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 11/261 (4%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
D A++ F ++ E ++ S+N LL A CT R+ D LFDE+ PD ++Y
Sbjct: 238 LDEAVQLFQELPE----KNTCSYNILLKALCTAGRIKDAHQ-LFDEMASP----PDVVTY 288
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
G+++ +C + A++LL+EM +G+E+ V YT+V+ L +G +A R+ +M
Sbjct: 289 GIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM 348
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
GV LD A + ++ GD + DEM+ GL D ++Y L+ C+ + E
Sbjct: 349 HGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKE 408
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A++V + +E+ G +A T+ I C G +A+ V + V P+ T L +
Sbjct: 409 AERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSD 468
Query: 351 GLVKKKKIKEAKGVIRTIKKK 371
GL K+ + A ++ + K
Sbjct: 469 GLCKQGDVCAANELLHEMCSK 489
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 156/372 (41%), Gaps = 49/372 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + P + + ++ ++ L + R D L + + P + +
Sbjct: 239 DEAVQLFQEL------PEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIM- 291
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+ Y + A++ +M G + +++ +++ C ++ D V ++ D +
Sbjct: 292 --VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV-- 347
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + D + ++ C G A +EM+ +G+ VTYT ++N L + G +
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELK 407
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN---------------------------TY---- 249
EAER+ EME KG+D+D Y V I TY
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALS 467
Query: 250 -----GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
GD EL+ EM GL+ + +YN L+ CK +++A + ++E G
Sbjct: 468 DGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLK 527
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ T I LC S D+A+ + +E + P T +L+ G +++ K +
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRL 587
Query: 365 IR-TIKKKFPPN 375
+ ++K PN
Sbjct: 588 LEWMLEKNIHPN 599
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 6/216 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +AG + AMRT MDE G V ++ ++ A +S+ D+ L E+ K
Sbjct: 500 SLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDK 559
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P ++Y +L+ C SG + LL M K + T TY +++ + N +
Sbjct: 560 -GIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
++ M + V + YN+ I +KE + EM + G + SYN L
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKA--RNMKEALYFHSEMIEKGFRLTASSYNAL 676
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ K + EA++++E + + + + +I
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + +G + R + M E + ++N+L+ C + I + ++
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P++ +Y +L+K HC + + +AL +EM KG +T +Y ++ L K+ E
Sbjct: 631 --VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTE 688
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
A RL+ +M K+ + + YN I ++ D E L DE+ + L
Sbjct: 689 ARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTL 736
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 156/326 (47%), Gaps = 7/326 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KAL + + H+ V + DL + A+ + +LI ++ +I P
Sbjct: 70 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLIHRMRS-LRIGPSPKTFA 128
Query: 103 LI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ Y +G D A++ F M E G + + SFN +L +S+ +K LF + +
Sbjct: 129 IVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 188
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ S D ++Y +++ C + KALE+L EM ++G+ TY T+L ++ G +
Sbjct: 189 F--SADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQ 246
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + EM+K+ ++DV Y + + +G G+ +R + + DEM G+ P +YN +
Sbjct: 247 AWEFFLEMKKRNCEIDVVTYTT-VVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFI 305
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + ++ A ++E + G PN TT+ I L +G F + ++ +
Sbjct: 306 QVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCE 365
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
P+F T +++ + ++++A G+
Sbjct: 366 PNFQTYNMMIRYYSECSEVEKALGLF 391
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 7/217 (3%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P ++ ++ + + SG DKA++L M G ++ T+L+ L K E+A
Sbjct: 120 IGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 179
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ + + D YNV I N + P+ L E++ EM D G+ P+ +YN ++
Sbjct: 180 ELFRALRGR-FSADTVTYNV-IVNGWCLIKRTPKAL-EVLKEMVDRGINPNLTTYNTMLQ 236
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + + +A + + +++ C + T+ T ++ +G + VF E + +P
Sbjct: 237 GFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLP 296
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
T ++ L KK ++ A + ++K + PNV
Sbjct: 297 SVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNV 333
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 189/413 (45%), Gaps = 54/413 (13%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ---DLTVRRLAKSKRFSDIE 82
IS + S LR + P AL ++ + + P RY DL + +L +S+ F ++E
Sbjct: 7 ISPFRLSSLLRLQNGPKLALQLFQNPN---PDPKPFRYTHLSYDLIITKLGRSRMFHEME 63
Query: 83 TLIESHKNDPKIT-QEPYLCNLIRSYGQAGMFDHAMRTFDQ------------------- 122
++ + + + + +E CN+I YG+A + D A++TF+
Sbjct: 64 QILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFESIPEFRCQRTVKSLNSLLNA 123
Query: 123 ----------------MDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKKYNLS 165
+D+ TP +V ++N L+ AC S RL D + FDE+ +K+ +
Sbjct: 124 LLNCKEFEKFDGILSGIDKFATP-NVCTYNILINACCLSGRLGDAWNV-FDEMLRKH-VC 180
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
P+ +++G L+ C D+A L +M + V+ Y +++ L + A
Sbjct: 181 PNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFE 240
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
L EM + LD Y+ I + G + + +++EMR+ G KPDT++YN +++ +C
Sbjct: 241 LKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFC 300
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ + A V E + GC P+ ++ I LC G + +A +F++ PD
Sbjct: 301 NEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVG 360
Query: 344 TVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKKVE-----EELGLV 390
+ ++L +GL + + EA ++ + K + P K VE ELG+V
Sbjct: 361 SYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEALCSGRELGVV 413
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 135/249 (54%), Gaps = 6/249 (2%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G +FN L+ A S D LFDE+P+K P++ ++G+L++ +C +G +DK
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYCKAGLTDK 200
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
LELLN ME+ GV V Y T+++ ++G +++E++ +M ++G+ D+ +N RI+
Sbjct: 201 GLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRIS 260
Query: 247 NTYGG----DPERLKELIDEMRDAGL-KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
D R+ ++ GL +P++I+YN ++ +CK ++++AK ++E + EN
Sbjct: 261 ALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ ++ W+ L G F +A V K+ P + +L++GL K + +A
Sbjct: 321 DDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Query: 362 KGVIRTIKK 370
K ++ +K+
Sbjct: 381 KTIVGLMKR 389
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 152/358 (42%), Gaps = 40/358 (11%)
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPY---LCNLIRS 106
+ ++ P + +L ++ K D +TL ES +ND + + Y L L+R
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLS 165
G F A QM + G S+ S+N L+ C L D I+ + K+ +
Sbjct: 340 ----GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV--GLMKRNGVC 393
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++YG LL +C G D A LL EM T +L+ L+K G EAE L
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAG----------------- 267
+M +KG LD N+ + G G+ ++ E++ MR G
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 268 ------LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
PD I+Y+ L+ CK EAK ++ + P++ + +I+H C G
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 322 NFDKAYKVFK--ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
A++V K E HK T L+ GL K +I E G++ +K+K PN+
Sbjct: 574 KISSAFRVLKDMEKKGCHK--SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI 629
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 163/371 (43%), Gaps = 43/371 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + V + S Y +L + K +R + L + I + Y
Sbjct: 92 DKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVL-CGIAPQTYTF 150
Query: 102 NL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
NL IR+ + D A FD+M E G + +F L+ ++ L DK L + + +
Sbjct: 151 NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM-E 209
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + P+K+ Y ++ S C G +D + +++ +M +G+ VT+ + ++ L K+G
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 221 EAERLWSEME-----------------------KKGVDLD----------------VAAY 241
+A R++S+ME K G+ D + +Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N+ + G + ++ +M D G+ P SYN LM CK M+ +AK + ++
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NG P+A T+ ++ C G D A + +E + + +P+ T +L+ L K +I E
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 361 AKGVIRTIKKK 371
A+ ++R + +K
Sbjct: 450 AEELLRKMNEK 460
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 20/278 (7%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLI-RSYGQAGMFDHAMRTFD 121
Y ++ + L K R S+ E L+ N+ + CN+I +G D A+
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKM-NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M G+ L + L D+ + N PD I+Y LL C +
Sbjct: 491 GMRVHGSA-------------ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G +A L EM + ++ +V Y ++ KQG A R+ +MEKKG + Y
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 242 NVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N I G ++ E L+DEM++ G+ P+ +YN + C+ E +++A + + +
Sbjct: 598 NSLILGL--GIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+ +PN +F+ I C +FD A +VF+ +V +
Sbjct: 656 MQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 132/332 (39%), Gaps = 27/332 (8%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
S Y+ ++ + L K SD +T++ K + L+ Y G D A
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 121 DQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
+M + + N LL + + R+ + +L K Y L D ++ +++ C
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL--DTVTCNIIVDGLC 477
Query: 180 DSGSSDKALELLNEMENKGVEVT-----------------------TVTYTTVLNCLYKQ 216
SG DKA+E++ M G +TY+T+LN L K
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
G EA+ L++EM + + D AYN+ I + G ++ +M G +Y
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ + E + + ++E G SPN T+ T I +LC + A + E +
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ P+ + K L+E K A+ V T
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET 689
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 52/191 (27%)
Query: 120 FDQMDELGTPRSVISFN-ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
D+M E G ++ ++N A+ + C ++ D +L DE+ +K N++P+ S+ L+++
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL-DEMMQK-NIAPNVFSFKYLIEAF 674
Query: 179 CD----------------------------------SGSSDKALELLNEMENKGVEVTTV 204
C +G KA ELL + ++G E+ T
Sbjct: 675 CKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR 264
Y ++ L K+ E A + +M +G YG DP L +ID +
Sbjct: 735 LYKDLVESLCKKDELEVASGILHKMIDRG---------------YGFDPAALMPVIDGLG 779
Query: 265 DAGLKPDTISY 275
G K + S+
Sbjct: 780 KMGNKKEANSF 790
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 162/330 (49%), Gaps = 17/330 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES--HKNDP--KITQE 97
D A + +++ + SP + Y L + L ++ R+ D + L+ KN P ++T
Sbjct: 329 DDAFEFLNNMGSYGCSPDTISYTTVL--KGLCRAGRWEDAKELLNEMVRKNCPPNEVTFN 386
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
++C L Q G+ D A+ +QM E G ++++NAL+ C + R+ D LF+
Sbjct: 387 TFICILC----QKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRV-DSALELFN 441
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+P + P+ I+Y LL C + D A ELL EM + VT+ +++ ++
Sbjct: 442 SLPCE----PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQK 497
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
G EEA L +M + G ++ +N + T + E EL+ + G+ DTI+Y
Sbjct: 498 GFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITY 557
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ ++ + + ++EA +++ +++ G P A + + LC D+A F V
Sbjct: 558 SSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVS 617
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+P+ +T +L+EGL ++ +KEA+ V+
Sbjct: 618 NSCMPNESTYVILIEGLAREGLLKEARYVL 647
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 164/363 (45%), Gaps = 19/363 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A I + +S + P + Y L + L +KR+ D+E L + + E
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVL--KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
L+R + + GM + A+ D+M E G + N ++ + C + R+ D L +
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM--G 339
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y SPD ISY +LK C +G + A ELLNEM K VT+ T + L ++G +
Sbjct: 340 SYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLID 399
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A L +M + G + + YN + G + EL + + +P+TI+Y L+
Sbjct: 400 QAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLL 456
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T C E +D A ++ + +N C N TF + C G ++A ++ ++ +
Sbjct: 457 TGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCT 516
Query: 340 PDFNTVKLLVEGLVKKKKIKEA---------KGV-IRTIKKKFPPNVLRAWKKVEEELGL 389
P+ T L++G+ + +EA KG+ + TI +VL ++EE + +
Sbjct: 517 PNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQM 576
Query: 390 VPA 392
A
Sbjct: 577 FHA 579
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 153/357 (42%), Gaps = 49/357 (13%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDH 115
SP SSR + + LA++ R + T S P + YLC LIR+ + G
Sbjct: 36 SPASSRLRRLIARDDLAEAARLVERST---SRGEAPDV----YLCTKLIRNLCRRGRTSD 88
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R + G P V ++N L+ R D L +P + PD +Y L+
Sbjct: 89 AARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYTPLI 144
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ CD G AL LL++M + + + VTYT +L + K +A ++ EM KG
Sbjct: 145 RGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCT 204
Query: 236 LDVAAYNVRIT------------------NTYGGDP------------------ERLKEL 259
++ YNV I ++YG P E ++ L
Sbjct: 205 PNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVL 264
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
EM + P+ ++++ L+ +C+ M++ A +V + + E+GC+ N T I +C
Sbjct: 265 FCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICK 324
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
G D A++ PD + +++GL + + ++AK ++ ++K PPN
Sbjct: 325 QGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPN 381
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G A+ D M SV+++ LL A +S + + + DE+ K
Sbjct: 143 LIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAK- 201
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ ++Y +++ C D A ++LN + + G + TV+YTTVL L E+
Sbjct: 202 GCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDV 261
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L+ EM + + +++ + GG ER E++D M + G +T N ++
Sbjct: 262 EVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINS 321
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +D+A + + GCSP+ ++ T + LC +G ++ A ++ E V + P+
Sbjct: 322 ICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPN 381
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI 365
T + L +K I +A +I
Sbjct: 382 EVTFNTFICILCQKGLIDQAILLI 405
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 134/252 (53%), Gaps = 2/252 (0%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
++ +LG +V ++NAL+ ++ +D LF E+ + L P++++Y +L+ + C
Sbjct: 351 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKR 409
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G + AL L ++M +KG++VT Y +++N KQG+ + A L S M K+G+ A+Y
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 469
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ I GD EL EM + G+ + ++ L+ +CK++ MDEA ++++ + +
Sbjct: 470 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 529
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+ PN TF I C GN KA++++ + V + PD T + L+ GL + +
Sbjct: 530 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 589
Query: 361 AKGVIRTIKKKF 372
A + ++ +
Sbjct: 590 ANEFVADLENSY 601
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 10/325 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPY 99
D+A + S + K +P ++ Y+ +A R D+ + +E H+ + I Y
Sbjct: 448 DRARGLLSGMVKEGLTPTAASYSP-----LIAGLCRNGDLSSCMELHREMAERGIAWNNY 502
Query: 100 -LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LI + + D A R FD+M + + ++FN ++ K L+D++
Sbjct: 503 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 562
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ L PD +Y L+ C + KA E + ++EN + + T +L +++G
Sbjct: 563 VEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 621
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E LW EM +GV LD+ ++ + + D E+ L EM++ G+KPD I Y
Sbjct: 622 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 681
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K E M +A ++ + +G SPN T I +LC SG A + KE + +
Sbjct: 682 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 741
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAK 362
+P+ T ++ + +++AK
Sbjct: 742 VLPNKFTYNCFLDYFATEGDMEKAK 766
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 142/314 (45%), Gaps = 2/314 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V + +A + + +L K++RF D + L + E LI + + GM + A+
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD+M + G +V +N+L+ + D+ L + K+ L+P SY L+
Sbjct: 418 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGL 476
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C +G +EL EM +G+ T+T ++N K +EA RL+ +M V +
Sbjct: 477 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 536
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+NV I G+ + +L D+M + GLKPD +Y L++ C + +A +
Sbjct: 537 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 596
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
LE + N + +Y G F + Y ++ E + D + ++V +K+
Sbjct: 597 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 656
Query: 358 IKEAKGVIRTIKKK 371
+++ + R +K++
Sbjct: 657 KEKSCVLFREMKEQ 670
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 6/335 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA +Y + + P Y + L + S + +N + L
Sbjct: 554 KAFQLYDQMVEMGLKP--DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 611
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G F +D+M G ++SF +++A + +K +LF E+ K+
Sbjct: 612 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQ 670
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I Y ++ + + +AL ++M G TVT+T ++N L K G A
Sbjct: 671 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 730
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM V + YN + GD E+ K+L M L +S+N L+
Sbjct: 731 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA-SIVSFNILIKG 789
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA + + E+G SP+ ++ T I+ LC G+ +KA++++ E + PD
Sbjct: 790 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 849
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPN 375
+ + + +A G+ I+ PN
Sbjct: 850 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 884
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 45/274 (16%)
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+LF+ + R + LFD++ + + D+ Y ++++C+S + D A L+ ME++
Sbjct: 192 ILFSLVKIRQFALARDLFDKMLQS-GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE 250
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--------------- 242
GV+ + V Y ++ L K +EA + + M GV D Y
Sbjct: 251 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 310
Query: 243 VRITN--------------TYGGDPERLKELIDE-------MRDAGLKPDTISYNFLMTC 281
+RIT+ ++ D R KEL++E + D G+ P+ +YN L+
Sbjct: 311 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 370
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF----KESVMVH 337
CKNE D+A ++++ + G PN T+ I+ LC G + A +F + + V
Sbjct: 371 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 430
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P +N+ L+ G K+ + A+G++ + K+
Sbjct: 431 VYP-YNS---LINGYCKQGSLDRARGLLSGMVKE 460
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+S+ +L+K C +G +A++L++++ G ++Y+T+++ L K G+ +A LW+E
Sbjct: 781 VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNE 840
Query: 229 MEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
M KG+ DV AYN +R N +G + L + +R +G++P+ +Y L++
Sbjct: 841 MLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR-SGVQPNWDTYRALLS 893
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPE 254
+ G+ V T + +L L K A L+ +M + GV LD Y I + +
Sbjct: 179 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 238
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ L+ M G+K + YN LM CKN + EA +V + G + + T+RT +
Sbjct: 239 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 298
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
Y C + A ++ + + + +P +++ L KK+ ++EA
Sbjct: 299 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 345
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 142/279 (50%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + G D A+R D+M LG ++ N+L+ C R +++ ++ +
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV--D 395
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+NL PD SY LL +C G + +A L ++M +G+E T +TY T+L L + G ++
Sbjct: 396 WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDD 455
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++W M K GV D Y+ + + + E L ++ G I++N +++
Sbjct: 456 ALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMIS 515
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI- 339
CK M EA+++++ +++ GCSP+ T+RT I C + N +A+KV K ++ I
Sbjct: 516 GLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKV-KGAMEREXIS 574
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
P L+ GL K +++ E ++ + + PN++
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIV 613
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +A A + M+ S+ +N+L+ +SR + L E+ +
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIR- 606
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ ++YG L+ C G DKA EM G+ + +T+++ LY+ G +EA
Sbjct: 607 GLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEA 666
Query: 223 ERLWSEMEKKGVDLDVAAY---NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
L +M G D + ++R +++ + +DE L P+ I YN +
Sbjct: 667 NLLMQKMVDHGFFPDHECFLKSDIRYAAI-----QKIADSLDESCKTFLLPNNIVYNIAI 721
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +D+A++ + L G P+ T+ T I+ +GN D+A+++ E + +
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T L+ GL K + + A+ + + +K PNV+
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVV 820
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 143/332 (43%), Gaps = 13/332 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF---SDIETLIESHKNDPKITQEPY 99
+A + ++ + SP Y + L KS+R +D+ T + P I
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNS--LISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYG- 616
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI + + GM D A ++ +M E G ++I + ++ R D+ +L ++
Sbjct: 617 --ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ PD + LKS + K + L+E + + Y + L K G
Sbjct: 675 D-HGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
++A R +S + KG D Y I + G+ + L DEM GL P+ ++YN L
Sbjct: 731 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK+E +D A++++ L + G PN T+ T I C GN D A+K+ + +
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 850
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P T L+ GL K I+ + ++ + K
Sbjct: 851 SPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y G + A M E G R+V+++ L+ + D+ + + ++
Sbjct: 266 SLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEE 325
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD+ +YG+L+ +C +G D A+ LL+EM G++ +++N K+G E
Sbjct: 326 AALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHE 385
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE + + M + D +YN + G L D+M G++P ++YN L+
Sbjct: 386 AEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLK 445
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ D+A +++ + + G +P+ + T + L NF+ A ++K+ +
Sbjct: 446 GLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTK 505
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++ GL K K+ EA+ + +K
Sbjct: 506 SRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 37/275 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ Y + G+ +A+ FD M + G S+ S N+LL ++ ++ ++ +
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIR-V 220
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +++ + C G D+A + +MEN GVE VTY +++N G+ E A
Sbjct: 221 GIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAA 280
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ + M +KGV +V ++Y L+ Y
Sbjct: 281 KGVLKFMSEKGVSRNV----------------------------------VTYTLLIKGY 306
Query: 283 CKNEMMDEAKKVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK MDEA+KV G+ EE P+ + I C +G D A ++ E + + +
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
L+ G K+ +I EA+GVI R + P+
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 8/165 (4%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI Y AG D A R D+M G +++++NAL+ +S D+ LF ++ +
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 812
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L P+ ++Y L+ +C G+ D A +L ++M +G+ + VTY+ ++N L K G+ E
Sbjct: 813 K-GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-----TNTYG--GDPERLKE 258
+ +L ++M K GVD + Y + T+ Y PE LK+
Sbjct: 872 RSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQ 916
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +Y L+ + +G+ D+A L +EM +G+ VTY ++N L K N + A+RL
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ ++ +KG+ +V YN I G+ + +L D+M + G+ P ++Y+ L+ CK
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK--VFKESVMVHKIPDF 342
+ ++ + K+ + + G + T + + N+++ K K+++ +P F
Sbjct: 867 HGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNCFLLPKF 926
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
++RS G + A + M G SV++FN L+ F C + L + IL +++P
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDIL-EKMPM- 215
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +P+ +SY LL C D+A+E L+ M ++G VTY T+L L K G +
Sbjct: 216 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 275
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +++ KG + YN I + G ER +L+DEMR GLKPD I+Y+ L++
Sbjct: 276 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 335
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +DEA K + LE G PNA T+ + + LC S D+A + P
Sbjct: 336 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 395
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
T +L+EG+ + KEA
Sbjct: 396 TEATYTILIEGIAYEGLAKEA 416
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
AM+ D+M G+ V+++N L+ C RL + + L + +P Y P+ I++ +
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL-NNMP-SYGCQPNVITHNI 157
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
+L+S C +G A +LL++M KG + VT+ ++N L +QG A + +M G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217
Query: 234 VDLDVAAYNVRITNTYGGDPE----RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+ +YN + +G E R E +D M G PD ++YN L+T CK+ +D
Sbjct: 218 CTPNSLSYNPLL---HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 274
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
A ++ L GCSP T+ T I L G ++A K+ E PD T LV
Sbjct: 275 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 334
Query: 350 EGLVKKKKIKEA 361
GL ++ K+ EA
Sbjct: 335 SGLSREGKVDEA 346
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L DE+ K + PD ++Y +L+ C G D+A++ LN M + G + +T+ +L +
Sbjct: 104 LLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 162
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
G +AE+L S+M +KG V +N+ I G R +++++M G P++
Sbjct: 163 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 222
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+SYN L+ +CK + MD A + + + GC P+ T+ T + LC G D A ++ +
Sbjct: 223 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 282
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P T +++GL K K + A ++ +++K P+++
Sbjct: 283 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 328
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+ +++ C +A++LL+EM NKG + VTY ++N + K+G +EA + + M
Sbjct: 84 GFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 143
Query: 230 EKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
G +V +N+ + + G ++L+ +M G P +++N L+ C+ ++
Sbjct: 144 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
A + E + +GC+PN+ ++ ++ C D+A + V PD T L
Sbjct: 204 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 263
Query: 349 VEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLV 390
+ L K K+ A ++ + K VL + V + L V
Sbjct: 264 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 305
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G + A++ D+M G +I++++L+ +R D+ F ++ +
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL-EGL 356
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ I+Y ++ C S +D+A++ L M +K + T TYT ++ + +G A+EA
Sbjct: 357 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 416
Query: 223 ERLWSEMEKKGV 234
L +E+ +G+
Sbjct: 417 LDLLNELCSRGL 428
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 6/279 (2%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + G+ G+ F+ A FD+M G I+FN+LL C R L++ LF E+ +
Sbjct: 261 VIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYR 320
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D +Y LL + C G D A ++++EM K + VTY+TV++ K G +E
Sbjct: 321 -GIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDE 379
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A L++EM+ + LD +YN + + Y G E + EM +G+K D ++YN L+
Sbjct: 380 ALNLFNEMKFASIGLDRVSYNT-LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALL 438
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K +E K+V+E ++ PN T+ T I G + +A +VF+E
Sbjct: 439 GGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLK 498
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D L++ L K ++ A + + K+ PNV+
Sbjct: 499 ADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVV 537
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 138/270 (51%), Gaps = 3/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKK 161
LI +YG++G D A++ F+ M G +++++NA++ AC + + +++ +FDE+ +
Sbjct: 226 LISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRN 285
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD+I++ LL G + A L +EM +G+E TY T+L+ + K G +
Sbjct: 286 -GVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDL 344
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ SEM +K + +V Y+ I G + L +EM+ A + D +SYN L++
Sbjct: 345 AFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLS 404
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K +EA V + +E +G +A T+ + G +++ +VF+E P
Sbjct: 405 IYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFP 464
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ T L++ K +EA V R KK
Sbjct: 465 NLLTYSTLIDVYSKGGLYQEAMEVFREFKK 494
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 116/233 (49%), Gaps = 4/233 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ G+ G+++ A F +M G + + ++N LL A + D + E+P+K
Sbjct: 296 SLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRK 355
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + P+ ++Y ++ + +G D+AL L NEM+ + + V+Y T+L+ K G EE
Sbjct: 356 H-IMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEE 414
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + EME G+ D YN + YG G E +K + +EM+ + P+ ++Y+ L+
Sbjct: 415 ALNVCKEMESSGIKKDAVTYNA-LLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLI 473
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
Y K + EA +V+ ++ G + + I LC +G + A E
Sbjct: 474 DVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDE 526
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI--TNTYGGDP 253
N+G T ++ +++ + G +EA +++ M+ G+ ++ YN I G D
Sbjct: 213 NEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDF 272
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
R E+ DEM G++PD I++N L+ + + + A+ ++ + G + T+ T
Sbjct: 273 NRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTL 332
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ +C G D A+++ E H +P+ T +++G K ++ EA + +K
Sbjct: 333 LDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 388
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-NAEEAERLWSE 228
++ L+ ++ SG D+A+++ M++ G++ VTY V++ K G + A ++ E
Sbjct: 222 AFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDE 281
Query: 229 MEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M + GV D +N + GG E + L EM G++ D +YN L+ CK
Sbjct: 282 MLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQ 341
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
MD A ++ + PN T+ T I +G D+A +F E
Sbjct: 342 MDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNE 386
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL++++ + +AS R + + + AK RF + + + ++ I ++
Sbjct: 378 DEALNLFNEMK--FASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESS-GIKKDAVTY 434
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N L+ YG+ G ++ R F++M ++++++ L+ ++ LY + +F E K
Sbjct: 435 NALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREF-K 493
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L D + Y L+ + C +G + A+ L+EM +G+ VTY ++++ + G+AE
Sbjct: 494 KAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE 553
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 168/344 (48%), Gaps = 13/344 (3%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
IS A S ++ E DP LDI++ S+ + + + L + K+F ++ ++
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFNKASQQKGFN-HNNATYSVLLDNLVRHKKFLAVDAIL 112
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS 145
K + QE NL+R + ++ + D M F+ + + + S NA+ + +
Sbjct: 113 HQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKP--SLNAI--STCLN 168
Query: 146 RLYDKVPILFDE---IPKKYNLS--PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
L D + + K+NL P+ + +L+K HC +G + A ++ EM+ G+
Sbjct: 169 LLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGIS 228
Query: 201 V-TTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLK 257
++TY+T+++CL+ ++EA L+ +M K+G+ D +NV I G+ ER K
Sbjct: 229 YPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAK 288
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+++D M+ G P+ +Y+ LM +CK + EAK+ ++ +++ G + + T +
Sbjct: 289 KILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
C +G D+A K+ E D T +++ GL + + +EA
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 2/239 (0%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D + + G ++FN ++ R+ ++ + D KK +P+ +Y L+ C
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEVERAKKILD-FMKKNGCNPNVYNYSALMNGFCK 315
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G +A + +E++ G+++ TV YTT++NC + G +EA +L EM+ D
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Query: 241 YNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YNV + + G E +++D+ G+ + SY ++ C N +++A K +
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E G P+ T+ + LC SG + +V + + IP + +VE + K++K+
Sbjct: 436 ERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 123/240 (51%), Gaps = 14/240 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGT--PRSVISFNAL---LFACTRSRLYDKVPILFDE 157
L++ + + G + A ++M G P S I+++ L LFA +RS+ + LF++
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNS-ITYSTLMDCLFAHSRSK---EAVELFED 257
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K +SPD +++ +++ C +G ++A ++L+ M+ G Y+ ++N K G
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISY 275
+EA++ + E++K G+ LD Y + N + G+ + +L+ EM+ + + DT++Y
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTT-LMNCFCRNGETDEAMKLLGEMKASRCRADTLTY 376
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ +EA ++ + G N ++R + LC +G +KA K SVM
Sbjct: 377 NVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL--SVM 434
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G A +TFD++ + G + + L+ R+ D+ L E+ K
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM-KAS 367
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D ++Y ++L+ G S++AL++L++ ++GV + +Y +LN L G E+A
Sbjct: 368 RCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Query: 223 ERLWSEMEKKGVDLDVAAYN---VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ S M ++G+ A +N VR+ + G ++ LI +R GL P S+ ++
Sbjct: 428 VKFLSVMSERGIWPHHATWNELVVRLCES-GYTEIGVRVLIGFLR-IGLIPGPKSWGAVV 485
Query: 280 TCYCK 284
CK
Sbjct: 486 ESICK 490
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 139/283 (49%), Gaps = 43/283 (15%)
Query: 123 MDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M +LG ++++FN LL C+++++ D V LFDE+ K + PD I+Y ++ C
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVK-LFDEMVKMGH-EPDVITYSTIINGLCKM 58
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G++ AL+LL +ME KG + V Y T+++ L K EA +SEM K+G+ DV Y
Sbjct: 59 GNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTY 118
Query: 242 --------------------------NV---RITNTYGGDPERLKELIDE-------MRD 265
NV ++T T D K +I E M +
Sbjct: 119 SSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTE 178
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
GL+PD +YN L+ YC MDEA+K++ ++ GC+PN ++ I C SG D+
Sbjct: 179 KGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 326 AYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A + E M HK PD T L+ G + + +EA+ +++
Sbjct: 239 AKGLLAE--MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLK 279
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+++ + G + A F QM E + ++F L+ + R+ + ++F+ + +K
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y L+ +C D+A +L N M+ KG +Y ++N K G +E
Sbjct: 180 -GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDE 238
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ L +EM K + D+ Y+ + G P+ +EL+ EM GL P+ I+Y+ ++
Sbjct: 239 AKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ +DEA ++ + ++E+ PN + I +C G + A ++F + P
Sbjct: 299 GLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR 366
T +++ GL+K EA + R
Sbjct: 359 TVVTYTVMISGLLKGGLSNEACELFR 384
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 137/277 (49%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G A++ +M+E G +V+++N ++ + + RL + F E+ K+
Sbjct: 51 IINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKE- 109
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y +L C+ G ++A L +M + V VT+T +++ L K+ EA
Sbjct: 110 GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEA 169
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ M +KG++ DV YN + + ++L + M G P+ SYN L+
Sbjct: 170 WLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILING 229
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK+ +DEAK + + +P+ T+ T + C G +A ++ KE +P+
Sbjct: 230 HCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPN 289
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
T ++++GL K + EA +++ +++ K PN+
Sbjct: 290 LITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIF 326
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y D A + F+ MD G +V S+N L+ +S D+ L E+ K
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK- 249
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L+PD +Y L++ C G +A ELL EM + G+ +TY+ VL+ L K G+ +EA
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEA 309
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M++ ++ ++ Y + I G E +EL + G++P ++Y +++
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + +EA +++ + NGC PN+ T+ I +G+ A ++ +E V D
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSAD 429
Query: 342 FNTVKLL 348
+T ++L
Sbjct: 430 SSTFRML 436
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 161/350 (46%), Gaps = 11/350 (3%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIET 83
++I S K +L +E A+D +S + K P Y+ L R ++ +
Sbjct: 84 NTIIDSLCKDRLVTE-----AMDFFSEMVKEGIPPDVFTYSSIL--HGFCNLGRVNEATS 136
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-C 142
L + I + LI + M A F+ M E G V ++NAL+ C
Sbjct: 137 LFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYC 196
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
+RS++ D+ LF+ + +K +P+ SY +L+ HC SG D+A LL EM +K +
Sbjct: 197 SRSQM-DEAQKLFNIMDRK-GCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPD 254
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELID 261
TY+T++ + G +EA+ L EM G+ ++ Y++ + G + EL+
Sbjct: 255 IFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLK 314
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M+++ ++P+ Y L+ C ++ A++++ L G P T+ I L G
Sbjct: 315 AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++A ++F+E + +P+ T ++++G ++ A +I + K
Sbjct: 375 LSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L P +++ LL C A++L +EM G E +TY+T++N L K GN
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL----KELIDEMRDAGLKPDTISYN 276
A +L +ME+KG +V AYN I + +RL + EM G+ PD +Y+
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLC---KDRLVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ +C ++EA +++ + E PN TF I LC +A+ VF+
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T LV+G + ++ EA+ + + +K PNV
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNV 220
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE--SHKN-DPKITQEP 98
D+A +++ + + +P Y ++ + KS R + + L+ SHK+ P I
Sbjct: 202 DEAQKLFNIMDRKGCAPNVRSY--NILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYS 259
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
L+R + Q G A +M G ++I+++ +L C L + +L +
Sbjct: 260 ---TLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELL--K 314
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
++ + P+ Y +L++ C G + A EL + + KG++ T VTYT +++ L K G
Sbjct: 315 AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYN 276
+ EA L+ EM G + YNV I GD LI+EM G D+ ++
Sbjct: 375 LSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFR 434
Query: 277 FL 278
L
Sbjct: 435 ML 436
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 5/278 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L++ + G+ HA++ ++M E G + ++N ++ C + D ++ D I K
Sbjct: 294 SLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVK 353
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y PD ++ ++ +C D AL+L+ M G+ +TY +VLN L K G A+
Sbjct: 354 GY--LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
E + EM KG + YN+ I N E +I M GL PDTIS+N L+
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+N +D A +++ L+E G S A TF I N A K+F E +
Sbjct: 472 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 531
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK-GVIRTIKKKFPPNV 376
PD T ++LV+G K + A + + K F P++
Sbjct: 532 PDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSM 569
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 4/221 (1%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C RL + V ++ E Y ++PD ++Y L++ C +A + L M N+G
Sbjct: 161 CEGGRLEEAVALV--ESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIP 217
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELI 260
TY T+++ K+ +EA L + KG D Y I GD ER EL
Sbjct: 218 DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELF 277
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+E + LKPD + YN L+ C+ ++ A +V + E+GC P+ T+ I LC
Sbjct: 278 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKM 337
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GN A V ++++ +PD T +++G K+ K+ A
Sbjct: 338 GNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSA 378
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
MD G P + ++NA++ A + +D+ ++ + ++PD ++ + +KS C +G
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSA-GVAPDARTHTVRIKSFCITG 59
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
AL LL + +G +V + Y TV+ LY G+ +A L+ EM ++ V DVA +N
Sbjct: 60 RPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119
Query: 243 VRI-------------------------TNTY-----------GGDPERLKELIDEMRDA 266
+ N + GG E L++ M DA
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DA 178
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ PD ++YN LM CK+ + EA + + GC P+ T+ T I C +A
Sbjct: 179 YIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
++ K+++ +PD T L+ GL + ++ A
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERA 273
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 122/282 (43%), Gaps = 10/282 (3%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
C ++R G A FD+M V +FN +L A C + + + +L +
Sbjct: 84 CTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVL- 142
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +S +K + + ++ C+ G ++A+ L+ M+ + VTY T++ L K
Sbjct: 143 -KRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKV 200
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA---GLKPDTISYN 276
+EA + M +G D YN I D L+E + ++DA G PD ++Y
Sbjct: 201 QEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD--MLQEATELLKDAIFKGFVPDRVTYC 258
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ C ++ A +++ + P+ + + + LC G A +V E V
Sbjct: 259 SLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVED 318
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD T +++ GL K I +A V+ I K + P+V
Sbjct: 319 GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 123/270 (45%), Gaps = 16/270 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y + D A++ ++M G I++N++L ++ +V F+E+ K
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK- 423
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ I+Y +L+++ C ++A ++ M G+ T+++ T+++ + G+ + A
Sbjct: 424 GCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ ++++KG +N+ I Y + + +++ EM G KPD +Y L+
Sbjct: 484 YLLFQKLDEKGYSATADTFNILI-GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVD 542
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D A + G P+ TF + L + +A + V + +P
Sbjct: 543 GSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602
Query: 341 D-FNTV-----------KLLVEGLVKKKKI 358
+ +T+ K+LVE L+KK I
Sbjct: 603 EVVDTILSTDKKEIAAPKILVEELMKKGHI 632
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 1/169 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ + K + + +I D + LI + + G D A F ++DE
Sbjct: 433 NILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDE 492
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G + +FN L+ A + +F E+ K PD +Y +L+ C + + D
Sbjct: 493 KGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYKPDLYTYRVLVDGSCKAANVD 551
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+A L EM +KG + T+ VLN L EA + M + GV
Sbjct: 552 RAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGV 600
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 161/309 (52%), Gaps = 12/309 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTP 129
R K + + T+++ +P + +CN I A M + A+R ++M LG
Sbjct: 130 RAGKLRNAMQVLTMMQKAGIEPNL----LVCNTAIHVLVMANMLEKALRFLERMQLLGIM 185
Query: 130 RSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+V+++N L+ C R+ D + L E+P K SPDK+SY ++ C + + +
Sbjct: 186 PNVVTYNCLIKGYCDLHRVEDAME-LISEMPLK-GCSPDKVSYYTVMGFLCKNRRIREVM 243
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+++ +ME+ + VTY T+++ L K +A+EA + E +K+G +D Y+ I ++
Sbjct: 244 DVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSA-IVDS 302
Query: 249 YG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
Y G ++ KE+++EM G PD ++Y ++ + + + +A+K+ + + ++GC PN
Sbjct: 303 YCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPN 362
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
++ ++ LC GN +A ++ K S P+ T +++ G ++ K+ +A V+R
Sbjct: 363 TVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVR 422
Query: 367 -TIKKKFPP 374
I K F P
Sbjct: 423 EMIGKGFFP 431
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 140/305 (45%), Gaps = 3/305 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K++R ++ +IE ++ + + LI + D A++ + + G
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+ ++A++ + + D+ + +E+ + PD ++Y ++ +G +A ++L
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTR-GCIPDVVTYTAIINGFSQAGEVGQARKML 351
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
+M G + TV+YT L L ++GN+ EA + E++ + Y+V +
Sbjct: 352 QQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRRE 411
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G +++ EM G P + N L+ C+ +DEAKK E GC+ NA F
Sbjct: 412 GKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNF 471
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV-IRTIK 369
T I+ C + + A + + + +K PD T +++ L KK +I+EA + ++ +K
Sbjct: 472 TTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLK 531
Query: 370 KKFPP 374
K P
Sbjct: 532 KGIDP 536
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 94/213 (44%), Gaps = 1/213 (0%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++ D I Y ++L + A +L M +G++ T + V+ + G
Sbjct: 75 RQWRYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKL 134
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A ++ + M+K G++ ++ N I E+ ++ M+ G+ P+ ++YN L
Sbjct: 135 RNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCL 194
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YC +++A ++ + GCSP+ ++ T + LC + + V ++
Sbjct: 195 IKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKL 254
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ D T L+ L K + EA +R +K+
Sbjct: 255 LADQVTYNTLIHMLCKHQHADEALQFLREAQKR 287
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 41/255 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G A +M G + + N LL + R D+ +E
Sbjct: 404 VMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLN-M 462
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + +++ ++ C + AL LL++M VTYTT+++ L K+G EEA
Sbjct: 463 GCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEA 522
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L +M KKG+D Y + + YG G E L L+D+M
Sbjct: 523 TELTLKMLKKGIDPTPVTYRT-VIHRYGQIGRVEDLLNLLDKM----------------- 564
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
L C T F I LC GN + A K+ + +
Sbjct: 565 -----------------LTRQECR---TAFNQVIEKLCTFGNLEAADKLLGKVLRTASRI 604
Query: 341 DFNTVKLLVEGLVKK 355
D NT +L+E ++K
Sbjct: 605 DANTCHVLMESYLRK 619
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S + D A + G V +FN+L+ S + LF+E+ K
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK- 442
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD+ +Y +L+ S C S ++AL LL EME G V Y T+++ K EEA
Sbjct: 443 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEA 502
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTC 281
E ++ EME +GV D YN I E +L+D+M GL+PD +YN L+T
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTH 562
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK + +A + + + +GC+P+ T+ T I LC +G A ++ + M +
Sbjct: 563 FCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLT 622
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ +++ L K+ + EA + R + K PP+ +
Sbjct: 623 PHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAI 659
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 170/404 (42%), Gaps = 51/404 (12%)
Query: 35 LRSEFDPDKALDIYSSVSKH-YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
LR + D AL +++ SK P SS Y + L R+L K+ F + ++E K
Sbjct: 71 LRRQTDEVAALRVFNWASKQPNFVPSSSVYEEIL--RKLGKAGSFEYMRRVLEEMKLSGC 128
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE--------------------------LG 127
+ SYG+ ++D + M++ +
Sbjct: 129 EFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVE 188
Query: 128 TPRS----------VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ S V +FN L+ A ++ ++ +E+P Y LSPD+ ++ +++
Sbjct: 189 SAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPS-YGLSPDETTFTTIMQG 247
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+ + G+ D AL + +M G T VT ++N KQG ++A E +G D
Sbjct: 248 YIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPD 307
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
YN + G + E++D M GL PD +YN L++ CK ++EA K+ +
Sbjct: 308 QFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILD 367
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ CSPNA T+ I LC D+A ++ + +PD T L++GL
Sbjct: 368 QMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSS 427
Query: 357 KIKEAKGVIRTIKKK------FPPNVLR----AWKKVEEELGLV 390
K A + +K K F N+L + +K+EE L L+
Sbjct: 428 NHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLL 471
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G + A++ DQM + +++NA++ + + D+ + + K
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++ L++ C S + A++L EM+ KG TY +++ L EE
Sbjct: 408 -GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEE 466
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L EME G +V YN I E +E+ DEM G+ D+++YN L+
Sbjct: 467 ALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID 526
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK++ +++A ++ + + G P+ T+ + + H C +G+ KA + + P
Sbjct: 527 GLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNP 586
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T L+ GL K +++ A ++R+I+ K
Sbjct: 587 DIVTYATLISGLCKAGRVQVASRLLRSIQMK 617
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 154/351 (43%), Gaps = 40/351 (11%)
Query: 51 VSKHYASPVSSRYAQDLT-----VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIR 105
V ++S V R D++ ++ L K+ + ++E + E +++
Sbjct: 187 VESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQ 246
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKY-- 162
Y + G D A+R +QM E G P + ++ N L+ C + R+ + + + + + +
Sbjct: 247 GYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRP 306
Query: 163 -------------------------------NLSPDKISYGLLLKSHCDSGSSDKALELL 191
L PD +Y L+ C G ++A+++L
Sbjct: 307 DQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKIL 366
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
++M ++ VTY +++ L K+ +EA + + KG+ DV +N I
Sbjct: 367 DQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLS 426
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ + +L +EM+ G +PD +YN L+ C + ++EA + + +E NGC+ N +
Sbjct: 427 SNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIY 486
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T I C + ++A ++F E + D T L++GL K K++++A
Sbjct: 487 NTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDA 537
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 114/295 (38%), Gaps = 42/295 (14%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
A+D++ + P + ++ + L S++ + L++ + + L
Sbjct: 432 AMDLFEEMKGKGCRP--DEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTL 489
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI----- 158
I + + + A FD+M+ G R +++N L+ +S+ + L D++
Sbjct: 490 IDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGL 549
Query: 159 -PKKY----------------------------NLSPDKISYGLLLKSHCDSGSSDKALE 189
P K+ +PD ++Y L+ C +G A
Sbjct: 550 RPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASR 609
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
LL ++ KG+ +T Y V+ L+K+ EA RL+ EM K D Y +
Sbjct: 610 LLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669
Query: 249 YGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
GG P + E +D EM + G P+ S+ L C M D K+ + + E
Sbjct: 670 NGGGP--IGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIME 722
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 108/254 (42%), Gaps = 15/254 (5%)
Query: 128 TPRSVISFNALLFACTRSRLYDKVPIL--FDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
TP+ +I T R D+V L F+ K+ N P Y +L+ +GS +
Sbjct: 63 TPKQLIE--------TLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFE 114
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK-GVDLDVAAYNVR 244
+L EM+ G E + + K +E + ME + + D YNV
Sbjct: 115 YMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVL 174
Query: 245 ITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ + +L E M ++ D ++N L+ CK + A + E + G
Sbjct: 175 LNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGL 234
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN-TVKLLVEGLVKKKKIKEAK 362
SP+ TTF T + GN D A ++ KE ++ + P + TV +L+ G K+ +I +A
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRI-KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQAL 293
Query: 363 GVIR-TIKKKFPPN 375
I+ + + F P+
Sbjct: 294 SFIQEAVSEGFRPD 307
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 164/343 (47%), Gaps = 40/343 (11%)
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRS 131
A S F +E ++ K + ++ E + ++YG+A + + A+ F +M E ++
Sbjct: 72 ASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQT 131
Query: 132 VISFNALLFACTRSRLYDKVPILFDEI--PKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V SFN++L + L+++ ++ + K N+ P+ +++ L++K+ C G DKA+E
Sbjct: 132 VKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIE 191
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+ E+ + TY+T+++ L K+ +EA L EM+ +G ++ A+NV I+
Sbjct: 192 VFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALC 251
Query: 250 G-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
GD R +L+D M G P+ ++YN L+ C +++A + + N C PN
Sbjct: 252 KKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDV 311
Query: 309 TFRT------------------------------WIYH-----LCGSGNFDKAYKVFKES 333
TF T ++Y LC G F++A +++KE
Sbjct: 312 TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEM 371
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
V P+ L++GL ++ K+ EA+G + +K K + PN
Sbjct: 372 VGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPN 414
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 18/289 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G F+ AM + +M G + I ++AL+ R D+ E+ K
Sbjct: 350 SLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNK 409
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ +Y L++ + ++G S KA+ + EM N V Y+ ++N L K G E
Sbjct: 410 GYL-PNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFME 468
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAG--LKPDTISYNFL 278
A +W +M +G+ LDV AY+ I + E+ +L ++M G ++PD I+YN L
Sbjct: 469 ALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNIL 528
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +C + + A + + + GC P+ T ++ L + N + + F + ++V
Sbjct: 529 LNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVR- 587
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
LVK+++ A +I + KF W V +++
Sbjct: 588 -------------LVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQV 623
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 109 QAGMFDHAMRTFDQM---DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
Q G+F+ A+ ++ + L + ++FN ++ A R L DK +F EIP + N +
Sbjct: 144 QEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLR-NCA 202
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +Y L+ C D+A+ LL+EM+ +G V + +++ L K+G+ A +L
Sbjct: 203 PDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKL 262
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS---------- 274
M KG + YN + G E+ L+++M P+ ++
Sbjct: 263 VDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVM 322
Query: 275 -------------------------YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
Y+ L++ CK ++A ++++ + GC PN
Sbjct: 323 QGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIV 382
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ I LC G D+A E +P+ T L+ G
Sbjct: 383 YSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRG 424
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 11/286 (3%)
Query: 89 KNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
+N P I YL N L+RS + G D M G +FN L+ S
Sbjct: 16 ENPPSI----YLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGC 71
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
D LFD++P+K P++ S+G+L++ +C +G + K LELL EM G V Y
Sbjct: 72 LDDARELFDKMPEK-GCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYN 130
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRD 265
T+++ K+G ++AE+L EM K G+ DV +N RI+ + G E + D D
Sbjct: 131 TLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQID 190
Query: 266 AGL---KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
L +P+ I+YN ++ +CK M++EA+ ++E ++ + N ++ W+ L G
Sbjct: 191 EVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGK 250
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+A V KE V + P+ + ++++GL K + +A+ ++R +
Sbjct: 251 LLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLM 296
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 161/370 (43%), Gaps = 43/370 (11%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA+ + S+ + S Y ++ +R K R + L + ++ E Y N
Sbjct: 2 KAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVA-SGVSPETYTFN 60
Query: 103 -LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI +G D A FD+M E G + SF L+ R+ K L E+ ++
Sbjct: 61 VLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEM-RR 119
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+K+ Y L+ S C G +D A +L++EM G+ VT+ ++ L G E
Sbjct: 120 LGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLE 179
Query: 222 AERLWSEMEKKGV----DLDVAAYNVRIT------------------------------N 247
A R++ +M+ V ++ YN+ + N
Sbjct: 180 ASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYN 239
Query: 248 TYGGDPERLKELID------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ R+ +L++ EM D G++P+ SYN +M CKN ++ +A+ + + +
Sbjct: 240 IWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS 299
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ T+ T ++ C +G +A V +E + P+ T +L+ L K+ +I EA
Sbjct: 300 GVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEA 359
Query: 362 KGVIRTIKKK 371
+ +++ + +K
Sbjct: 360 EELLQKMNEK 369
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 129/270 (47%), Gaps = 4/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD-EIPK 160
LI S+ + G D A + D+M + G V++FNA + A C+ ++ + I D +I +
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191
Query: 161 KYNL-SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
L P+ I+Y L+L C G ++A L +M+ + +Y L L + G
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA+ + EM G++ +V +YN+ + G + L+ M +G+ PDT++Y L
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YC + EA V + +GCSPN T +Y L G +A ++ ++
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY 371
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ D T ++++GL K+ +A ++ +
Sbjct: 372 VIDTVTCNIVIDGLCNNGKLDKAIEIVNGM 401
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 25/310 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + GM + A F++M + S+N L R + ++ E+
Sbjct: 206 MLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVD-M 264
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ SY +++ C +G A L+ M + GV TVTYTT+L+ G EA
Sbjct: 265 GMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEA 324
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ EM + G + N+ + + + G +EL+ +M + G DT++ N ++
Sbjct: 325 NNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDG 384
Query: 282 YCKNEMMDEAKKVYEGLEENG-----------------------CSPNATTFRTWIYHLC 318
C N +D+A ++ G+ +G C P+ ++ T I LC
Sbjct: 385 LCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLC 444
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLR 378
+G +A K F E + + PD + + K+ KI A V++ ++KK L+
Sbjct: 445 KAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQ 504
Query: 379 AWKKVEEELG 388
+ + LG
Sbjct: 505 TYNSLIMGLG 514
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 40/399 (10%)
Query: 5 RHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
R + RL T++ + T +++ + SE A ++ + + SP + Y
Sbjct: 290 RMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSE-----ANNVLREMMRDGCSP--NNYT 342
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQM 123
++ + L K R S+ E L++ N+ + CN+ I G D A+ + M
Sbjct: 343 CNILLYSLWKEGRISEAEELLQKM-NEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGM 401
Query: 124 DELGTPR-----------------------SVISFNALLFACTRSRLYDKVPILFDEIPK 160
G+ +IS++ ++ ++ + F E+
Sbjct: 402 WTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMG 461
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K NL PD Y + + S C G A +L +ME KG T TY +++ L +
Sbjct: 462 K-NLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIF 520
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E L EM ++GV DV+ YN +++ GG + ++DEM G+ P+ S++ L+
Sbjct: 521 EIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILI 580
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV-MVHK 338
+CK +++E + N C + L G KA ++F+ ++
Sbjct: 581 KAFCKACDFSAVDEIFE-IALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFD 639
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK---FPP 374
+ +F K L++ L K +K+ +A G++ + K F P
Sbjct: 640 VGNF-LYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDP 677
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 3/221 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
I S+ + G A R M++ G +++ ++N+L+ ++ L DE+ ++
Sbjct: 474 FIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER- 532
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD Y +L S C+ G A +L+EM KG+ +++ ++ K +
Sbjct: 533 GVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAV 592
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ ++ E+ A Y++ GG+ + KEL + D Y L+
Sbjct: 593 DEIF-EIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDH 651
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
CK+E +D+A + L + G + +F I L GN
Sbjct: 652 LCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGN 692
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI F A+R +M + G P I++N +L C + RL + +L D K
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM--KN 260
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P++ ++ +L+ C G +A ++ M V TY +++ KQG E
Sbjct: 261 KGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAE 320
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL EME + DV YN I + G E +LI+EM G+KP++++YN ++
Sbjct: 321 AMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVK 380
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ K MDE K +EE+GC P+ T+ T I C G D+A+++ E
Sbjct: 381 WFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKM 440
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T+ ++ L +++K+ EA ++ + +++
Sbjct: 441 DDVTLNTMLRALCRERKLDEAHDLLCSARRR 471
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
+++ + + G D +T +M+E G ++++N L+ + C ++ D+ L DE+ +K
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM-DEAFRLMDEMGRK 436
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D ++ +L++ C D+A +LL +G V V+Y T++ +K A +
Sbjct: 437 -GLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQ 495
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RLW EM++K + + YN I G + + +DE+ ++GL PD I+YN ++
Sbjct: 496 ALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIH 555
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YC+ +++A + + + E P+ T T + LC G +KA K+F + K
Sbjct: 556 GYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDV 615
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D + ++ L K+K+ EA ++ +++K
Sbjct: 616 DAVSYNTIILSLCKEKRFGEAFDLLEEMEEK 646
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 18/307 (5%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
D TVR++ +S DI T LI + + G D A R D+M
Sbjct: 392 DKTVRKMEESGCLPDIVTY----------------NTLISWHCKVGKMDEAFRLMDEMGR 435
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G ++ N +L A R R D+ L ++ D++SYG L+ + +
Sbjct: 436 KGLKMDDVTLNTMLRALCRERKLDEAHDLLCS-ARRRGYFVDEVSYGTLIIGYFKHEKAS 494
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+AL L +EM+ K + + +TY +++ L + G +A E+ + G+ D YN I
Sbjct: 495 QALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTII 554
Query: 246 TN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G E+ + ++M + KPD ++ N L+ CK M+++A K++ G
Sbjct: 555 HGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKD 614
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+A ++ T I LC F +A+ + +E PD T ++ GL ++K+A+
Sbjct: 615 VDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEF 674
Query: 365 IRTIKKK 371
I I +K
Sbjct: 675 ISKIAEK 681
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS------RLYDK 150
+P L I +Y G A + F++M LG ++++ N LL A R RL
Sbjct: 124 KPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKA 183
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
V F +I K N + S+ +L+ C +A+ +L +M + G +TY T+L
Sbjct: 184 VFTDFIKIGVKINTN----SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTIL 239
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
+ L K+G EA L +M+ KG+ + +N+ + G + +I+ M +
Sbjct: 240 DGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVV 299
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PD +YN +++ +CK + EA ++ E +E SP+ T+ T I G+ ++ +K+
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+E P+ T ++V+ VKK K+ E +R +++
Sbjct: 360 IEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEE 400
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 29/281 (10%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R L + ++ + L+ S + E LI Y + A+R +D+M E
Sbjct: 449 LRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEI 508
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
S+I++N+++ + ++ DE+ + L PD+I+Y ++ +C G +KA
Sbjct: 509 IPSIITYNSMIAGLCQMGKTNQAIDKLDELLES-GLVPDEITYNTIIHGYCQEGQVEKAF 567
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ N+M K + VT T+L L K+G E+A +L++ KG D+D +YN I +
Sbjct: 568 QFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSL 627
Query: 249 YGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS- 304
+R E L++EM + L PD +YN ++ M +A++ + E G S
Sbjct: 628 C--KEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSE 685
Query: 305 ----------------------PNATTFRTWIYHLCGSGNF 323
PNA + I LC G +
Sbjct: 686 NQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGRY 726
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 136/264 (51%), Gaps = 6/264 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG + F+++ G V S++ L+ ++ + LF E+ K+ L D
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM-KEQGLHLDV 622
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y ++ C SG DKA +LL EM+ KG++ T VTY +V++ L K +EA L+ E
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ GVDL+V Y+ I G R+ E +++E+ GL P++ ++N L+ K
Sbjct: 683 AKSIGVDLNVVIYSSLIDGF--GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKA 740
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
E +DEA+ ++ ++ CSPNA T+ I LC F+KA+ ++E P+ T
Sbjct: 741 EEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITY 800
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIK 369
++ GL K + EA+G+ K
Sbjct: 801 TTMIAGLAKAGNVMEARGLFDRFK 824
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 144/288 (50%), Gaps = 5/288 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELG 127
VR A+ R +L++ K++ T + L N+ I +G+ G D A + F +M G
Sbjct: 245 VRVFAREGRIDAALSLLDEMKSNS-FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG 303
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+++ L+ ++R D+ LF+E+ ++ P +Y ++ + +G D+A
Sbjct: 304 LVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSV-PCVYAYNTMIMGYGSAGKFDEA 362
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LL + KG + + Y +L CL ++G EEA R+ EM + ++ YN+ I
Sbjct: 363 YSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLTTYNILIDM 421
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G+ E ++ D M++AGL P+ ++ N ++ CK + +DEA ++ GL+ CSP+
Sbjct: 422 LCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPD 481
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ TF + I L G D AY ++++ + +IP+ L++ K
Sbjct: 482 SRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 156/321 (48%), Gaps = 17/321 (5%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ + RL K+++ + ++ + C+LI G+ G D A +++M +
Sbjct: 451 NIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510
Query: 126 LGTPRSVISFNALL---FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD-- 180
+V+ + +L+ F C R K+ + E+ + SPD +LL S+ D
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKI---YKEMVHR-GCSPDL----MLLNSYMDCV 562
Query: 181 --SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
+G +K L E++ +G+ +Y+ +++ L K G + E +L+ EM+++G+ LDV
Sbjct: 563 FKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDV 622
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
AYN I G ++ +L++EM+ GL+P ++Y ++ K + +DEA ++E
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ G N + + I G D+AY + +E + P+ T L++ LVK ++
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742
Query: 358 IKEAKGVIRTIKK-KFPPNVL 377
I EA+ + +K K PN +
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAM 763
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + A D + F QM E+G +V F L+ R D L DE+ K
Sbjct: 209 LIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEM-KSN 267
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + D + Y + + G D A + +EM+ +G+ VTYTT++ L K +EA
Sbjct: 268 SFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEA 327
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ E++ V AYN I YG G + L++ + G P I+YN ++T
Sbjct: 328 VELFEELDLNRSVPCVYAYNTMIMG-YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILT 386
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + ++EA ++++ + ++ +PN TT+ I LC +G + A KV P
Sbjct: 387 CLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFP 445
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ TV ++++ L K +K+ EA + + K
Sbjct: 446 NIMTVNIMIDRLCKAQKLDEACSIFLGLDHK 476
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 3/222 (1%)
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ +K+ P +Y L+ + + D L L ++M+ G E +TT++ ++
Sbjct: 192 EMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFARE 251
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTIS 274
G + A L EM+ D+ YNV I + +G G + + EM+ GL PD ++
Sbjct: 252 GRIDAALSLLDEMKSNSFTADLVLYNVCI-DCFGKVGKVDMAWKFFHEMKAQGLVPDDVT 310
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L+ CK +DEA +++E L+ N P + T I +G FD+AY + +
Sbjct: 311 YTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQK 370
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNV 376
IP ++ L +K K++EA + +++ PN+
Sbjct: 371 RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNL 412
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 138/302 (45%), Gaps = 5/302 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K++R + L E + + +I YG AG FD A ++ G S
Sbjct: 318 LCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPS 377
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
VI++N +L R ++ + DE+ + + +P+ +Y +L+ C +G + AL++
Sbjct: 378 VIAYNCILTCLGRKGKVEEALRIHDEM--RQDAAPNLTTYNILIDMLCKAGELEAALKVQ 435
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+ M+ G+ +T +++ L K +EA ++ ++ K D + + + G
Sbjct: 436 DTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTF-CSLIDGLGR 494
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + L ++M D+ P+ + Y L+ + K ++ K+Y+ + GCSP+
Sbjct: 495 RGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLML 554
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+++ + +G +K +F+E +PD + +L+ GLVK +E + +K
Sbjct: 555 LNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK 614
Query: 370 KK 371
++
Sbjct: 615 EQ 616
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 4/268 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + + P Y V LAK R + L E K+
Sbjct: 639 DKAYQLLEEMKTKGLQPTVVTYGS--VVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYS 696
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +G+ G D A +++ + G + ++N LL A ++ D+ + F + K
Sbjct: 697 SLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM-KN 755
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y +++ C +KA EM+ +G++ +TYTT++ L K GN E
Sbjct: 756 LKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVME 815
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLMT 280
A L+ + G D A YN I + ++ +E R G + ++ + L+
Sbjct: 816 ARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLD 875
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNAT 308
K + +++A V L E S +AT
Sbjct: 876 ALHKADCLEQAAIVGAVLREMAKSQHAT 903
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 127/273 (46%), Gaps = 7/273 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + ++G D A + ++M G +V+++ +++ + D+ +LF+E K
Sbjct: 628 VIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE-AKSI 686
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + + Y L+ G D+A +L E+ KG+ + T+ +L+ L K +EA
Sbjct: 687 GVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEA 746
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI--DEMRDAGLKPDTISYNFLMT 280
+ + M+ + Y++ I N + K + EM+ GLKP+ I+Y ++
Sbjct: 747 QVCFQNMKNLKCSPNAMTYSIMI-NGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K + EA+ +++ + +G P++ + I L + AY VF+E+ +
Sbjct: 806 GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRV 865
Query: 341 DFNTVKLLVEGLVKKKKIKEAK---GVIRTIKK 370
+ T +L++ L K +++A V+R + K
Sbjct: 866 NSKTCVVLLDALHKADCLEQAAIVGAVLREMAK 898
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
++RS G + A + M G SV++FN L+ F C + L + IL +++P
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDIL-EKMPM- 384
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +P+ +SY LL C D+A+E L+ M ++G VTY T+L L K G +
Sbjct: 385 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 444
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +++ KG + YN I + G ER +L+DEMR GLKPD I+Y+ L++
Sbjct: 445 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 504
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +DEA K + LE G PNA T+ + + LC S D+A + P
Sbjct: 505 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 564
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
T +L+EG+ + KEA
Sbjct: 565 TEATYTILIEGIAYEGLAKEA 585
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 154/322 (47%), Gaps = 10/322 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R+ K+K+ + + ++E P + L I Y ++G D+A++ D+M+
Sbjct: 161 RIGKTKKATWVMEILEQSGAVPDVITYNVL---ISGYCKSGEIDNALQVLDRMN---VAP 214
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V+++N +L C +L + +L ++ K+ PD I+Y +L+++ C +A++
Sbjct: 215 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE--CYPDVITYTILIEATCKESGVGQAMK 272
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL+EM NKG + VTY ++N + K+G +EA + + M G +V +N+ + +
Sbjct: 273 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332
Query: 250 G-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G ++L+ +M G P +++N L+ C+ ++ A + E + +GC+PN+
Sbjct: 333 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
++ ++ C D+A + V PD T L+ L K K+ A ++ +
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 452
Query: 369 KKKFPPNVLRAWKKVEEELGLV 390
K VL + V + L V
Sbjct: 453 SSKGCSPVLITYNTVIDGLSKV 474
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G + A++ D+M G +I++++L+ +R D+ F ++ +
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL-EGL 525
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ I+Y ++ C S +D+A++ L M +K + T TYT ++ + +G A+EA
Sbjct: 526 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 585
Query: 223 ERLWSEMEKKGV 234
L +E+ +G+
Sbjct: 586 LDLLNELCSRGL 597
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 2/266 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ +F+ M +I FN LL A R R Y I + + LSP+ + +
Sbjct: 72 DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNI 131
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C D +L ++ G++ T +T+TT++N L K G +A L+ +M +G
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
DV Y I G+ LI +M + G +PD ++Y+ L+ CK+ +++EA
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ ++ G SP ++ + I LC + +A + E ++ +PD T LL++
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVL 377
K+ + EA+GV++T+ + PNV+
Sbjct: 312 CKEGNVLEAQGVLKTMTEMGVEPNVI 337
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 144/281 (51%), Gaps = 12/281 (4%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC + + AG+ +M E+G V++++ L+ + + RL ++ +F +
Sbjct: 206 LCKMGETAAAAGLIK-------KMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMK 258
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +SP +SY L++ C +A +LNEM + + VT++ +++ K+GN
Sbjct: 259 AK-GISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL--KELIDEMRDAGLKPDTISYNF 277
EA+ + M + GV+ +V YN + + Y E + ++L D M G KPD SY+
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYN-SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSI 376
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ YC + +DEAK+++ + G +PN ++ T I+ C G +A ++FK+
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG 436
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
+PD T +L+EG K+ + +A + R ++ + PN++
Sbjct: 437 YLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 132/263 (50%), Gaps = 6/263 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI S + + + A+ F M G +V+S+ +L+ C+ SR + + + +E+
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR-WKEASAMLNEM-TS 294
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ PD +++ LL+ C G+ +A +L M GVE +TY ++++ Q E
Sbjct: 295 LNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVE 354
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L+ M +G DV +Y++ I N Y + K+L +EM GL P+T+SY L+
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILI-NGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLI 413
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+ + EA+++++ + NG P+ T+ + C G KA+++F+ +
Sbjct: 414 HAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLK 473
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
P+ +L++ + K + A+
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHAR 496
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 138/330 (41%), Gaps = 44/330 (13%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD 80
T S++ S K +L +E ALDI+S + SP Y ++ L R+ +
Sbjct: 232 VTYSTLIDSLCKDRLVNE-----ALDIFSYMKAKGISPTVVSYTS--LIQGLCSFSRWKE 284
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
++ + + LI + + G A M E+G +VI++N+L+
Sbjct: 285 ASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMH 344
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+ + LFD + + PD SY +L+ +C D+A +L NEM ++G+
Sbjct: 345 GYSLQMEVVEARKLFDVMITR-GCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI--------------- 245
TV+YTT+++ + G EA L+ +M G D+ Y+V +
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463
Query: 246 ----TNTY-----------------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
TY G+ ++L E+ GL+PD Y ++ CK
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCK 523
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
++DEA + + +EE+GC PN ++ I
Sbjct: 524 EGLLDEALEAFRKMEEDGCPPNEFSYNVII 553
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ Q G A F M G + +++ LL + K LF + Y
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ + Y +L+ S C SG+ + A +L +E+ G++ YTT++N L K+G +EA
Sbjct: 472 -LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEA 530
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPD 271
+ +ME+ G + +YNV I D R +LI EMRD G D
Sbjct: 531 LEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 136/267 (50%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G D A+ +D+M LG ++++FNAL+ + ++ + LFD+I ++
Sbjct: 314 LINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQ- 372
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L P+ I++ ++ + C +G ++ L N M ++G+ TY ++ L + N A
Sbjct: 373 DLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAA 432
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L +EME + DV YN+ I G+P + ++L+ EM + G+KP+ ++YN LM
Sbjct: 433 KKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDG 492
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC + A KV +E+ G N T+ I C +G + A ++ E + P+
Sbjct: 493 YCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPN 552
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T ++ +++K I + +G + I
Sbjct: 553 RTTYDVVRLEMLEKGFIPDIEGHLYNI 579
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 126/243 (51%), Gaps = 5/243 (2%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK---A 187
++ +FN + ++ +K + ++I K + SP+ ++Y L+ HC GS+ K A
Sbjct: 199 NLTTFNIFINGLCKAGKLNKAEDVIEDI-KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+L EM + +T+ T+++ K N A+ + EM+++G+ ++ YN I
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G + L D+M GLKP+ +++N L+ +CK +M+ EA+K+++ + E PN
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A TF T I C +G ++ + + + P+ +T L+ GL + + ++ AK ++
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLN 437
Query: 367 TIK 369
++
Sbjct: 438 EME 440
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 128/262 (48%), Gaps = 3/262 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F++M G +++++N+L+ + + D+ L+D++ L P+ +++ L+
Sbjct: 292 AKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVG-LGLKPNIVTFNALI 350
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C +A +L +++ + + +T+ T+++ K G EE L + M +G+
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410
Query: 236 LDVAAYNVRITNTYGGDPERL-KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+V+ YN I R K+L++EM + LK D ++YN L+ +CK+ +A+K+
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ G PN T+ T + C GN A KV + K + T +L++G K
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530
Query: 355 KKKIKEAKGVIR-TIKKKFPPN 375
K+++A ++ ++K PN
Sbjct: 531 TGKLEDANRLLNEMLEKGLNPN 552
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 33/263 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F ++ + G S+ S N LL A + ++ ++ E+ K+ + P+ ++ + +
Sbjct: 149 ACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKR-RIQPNLTTFNIFI 207
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C +G +KA +++ +++ G VTY T+++ K+G+A
Sbjct: 208 NGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSA---------------- 251
Query: 236 LDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
G R ++ EM + P+ I++N L+ +CK+E + AK +
Sbjct: 252 ---------------GKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAF 296
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
E ++ G PN T+ + I L +G D+A ++ + V + P+ T L+ G KK
Sbjct: 297 EEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKK 356
Query: 356 KKIKEAKGVIRTIKKK-FPPNVL 377
K IKEA+ + I ++ PN +
Sbjct: 357 KMIKEARKLFDDIAEQDLVPNAI 379
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 153/338 (45%), Gaps = 13/338 (3%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDP--KITQEPYLC---NLIRSYGQAGMFDH 115
SR A + + RL S+R D+ T + + DP K +P C LI+ Y + G
Sbjct: 151 SRKALAVCLDRLVSSRRCPDVLTELLADLRDPRSKYLPQPNTCIYNILIKHYVKKGDLGT 210
Query: 116 AMRTFDQMDELGTPR---SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
A + FD+M ++ S+++++ L+ R + LF+++ +K + PD+++Y
Sbjct: 211 AFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYN 270
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+ C G +KA + M E Y T++N K+G E A ++ EM +
Sbjct: 271 LLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRS 330
Query: 233 GVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
GV D +Y V +G E + L+ EM G K D ++YN L+ CK+ + E
Sbjct: 331 GVQPDAVSYTSLVGCLCRHGNVDEGIN-LVQEMWQKGCKADVVTYNLLLEGLCKDRRIAE 389
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A + E L G N ++R + LC G +KA + + +P + +L+
Sbjct: 390 AVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLI 449
Query: 351 GLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEEL 387
GL ++ +A + + F P R W ++ E +
Sbjct: 450 GLCDVGRVSDATVTLYGLVDTGFMPEA-RCWARLIESV 486
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 134/252 (53%), Gaps = 2/252 (0%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
++ +LG +V ++NAL+ ++ +D LF E+ + L P++++Y +L+ + C
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKR 386
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G + AL L ++M +KG++VT Y +++N KQG+ + A L S M K+G+ A+Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ I GD EL EM + G+ + ++ L+ +CK++ MDEA ++++ + +
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+ PN TF I C GN KA++++ + V + PD T + L+ GL + +
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Query: 361 AKGVIRTIKKKF 372
A + ++ +
Sbjct: 567 ANEFVADLENSY 578
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 10/325 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPY 99
D+A + S + K +P ++ Y+ +A R D+ + +E H+ + I Y
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSP-----LIAGLCRNGDLSSCMELHREMAERGIAWNNY 479
Query: 100 -LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LI + + D A R FD+M + + ++FN ++ K L+D++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ L PD +Y L+ C + KA E + ++EN + + T +L +++G
Sbjct: 540 VEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGR 598
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E LW EM +GV LD+ ++ + + D E+ L EM++ G+KPD I Y
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K E M +A ++ + +G SPN T I +LC SG A + KE + +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAK 362
+P+ T ++ + +++AK
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAK 743
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 142/314 (45%), Gaps = 2/314 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V + +A + + +L K++RF D + L + E LI + + GM + A+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD+M + G +V +N+L+ + D+ L + K+ L+P SY L+
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGL 453
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C +G +EL EM +G+ T+T ++N K +EA RL+ +M V +
Sbjct: 454 CRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+NV I G+ + +L D+M + GLKPD +Y L++ C + +A +
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
LE + N + +Y G F + Y ++ E + D + ++V +K+
Sbjct: 574 LENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633
Query: 358 IKEAKGVIRTIKKK 371
+++ + R +K++
Sbjct: 634 KEKSCVLFREMKEQ 647
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 6/335 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA +Y + + P Y + L + S + +N + L
Sbjct: 531 KAFQLYDQMVEMGLKP--DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G F +D+M G ++SF +++A + +K +LF E+ K+
Sbjct: 589 LLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQ 647
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I Y ++ + + +AL ++M G TVT+T ++N L K G A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA 707
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM V + YN + GD E+ K+L M L +S+N L+
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKG 766
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA + + E+G SP+ ++ T I+ LC G+ +KA++++ E + PD
Sbjct: 767 LCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPN 375
+ + + +A G+ I+ PN
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 45/274 (16%)
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+LF+ + R + LFD++ + + D+ Y ++++C+S + D A L+ ME++
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQS-GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE 227
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--------------- 242
GV+ + V Y ++ L K +EA + + M GV D Y
Sbjct: 228 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 243 VRITN--------------TYGGDPERLKELIDE-------MRDAGLKPDTISYNFLMTC 281
+RIT+ ++ D R KEL++E + D G+ P+ +YN L+
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF----KESVMVH 337
CKNE D+A ++++ + G PN T+ I+ LC G + A +F + + V
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P +N+ L+ G K+ + A+G++ + K+
Sbjct: 408 VYP-YNS---LINGYCKQGSLDRARGLLSGMVKE 437
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+S+ +L+K C +G +A++L++++ G ++Y+T+++ L K G+ +A LW+E
Sbjct: 758 VSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNE 817
Query: 229 MEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
M KG+ DV AYN +R N +G + L + +R +G++P+ +Y L++
Sbjct: 818 MLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR-SGVQPNWDTYRALLS 870
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPE 254
+ G+ V T + +L L K A L+ +M + GV LD Y I + +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ L+ M G+K + YN LM CKN + EA +V + G + + T+RT +
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
Y C + A ++ + + + +P +++ L KK+ ++EA
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 3/307 (0%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTF 120
+Y + K + D + + + K+ + N LI Y G + A+R
Sbjct: 183 KYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYR 242
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+M + G +V ++N + + L +E+ +K L+PD +Y +L+ +C
Sbjct: 243 GEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEK-GLAPDAFTYNILINGYCK 301
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G KA+++ M KG+ T VTYT++++ L +G +E +RL+++ ++G+ D+
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFM 361
Query: 241 YNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YN I ++ GGD +R E++ EM + PD ++YN LM C +DEA+ + E +
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ G P+ ++ T I G+ A KV E + P T +++GL +
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGG 481
Query: 360 EAKGVIR 366
+A+ +++
Sbjct: 482 DAEDLVK 488
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 4/254 (1%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMD 124
+L V L R ++ L+E + + + + N LI Y + G AM+ F+ M
Sbjct: 258 NLFVHTLFMEGRAAEAHALVE-EMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +V+++ +L+ A + + + LF++ ++ + PD Y L+ SHC G
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRR-GIRPDLFMYNALINSHCTGGDM 375
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D+A E++ EME K + VTY T++ L G +EA L EM K+G+ D+ +YN
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTL 435
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I+ + GD + ++ DEM G P ++YN ++ C N +A+ + + + NG
Sbjct: 436 ISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGI 495
Query: 304 SPNATTFRTWIYHL 317
+P+ +T+ + I L
Sbjct: 496 TPDDSTYISLIEGL 509
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 38/292 (13%)
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
+R + + ++ +P +V + C R R+ + I+ E+ ++ ++PDK +Y ++
Sbjct: 133 VRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIM-REMRERGGIAPDKYTYATVIS 191
Query: 177 SHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G + A ++ +EM +G VE V Y ++ QGN E A R EM +GV
Sbjct: 192 GWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVS 251
Query: 236 LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ VA YN+ + + G L++EM + GL PD +YN L+ YCK +A K+
Sbjct: 252 MTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKM 311
Query: 295 YEGLEENGCSPNATTFRTWIYHL-----------------------------------CG 319
+E + G T+ + I+ L C
Sbjct: 312 FEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCT 371
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G+ D+A+++ E PD T L+ GL ++ EA+G+I + K+
Sbjct: 372 GGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKR 423
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 166/345 (48%), Gaps = 24/345 (6%)
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIR 105
+++S++ P S + ++ ++ L K+ + ++E + + E L++
Sbjct: 179 NVHSTMVSKGIKPDVSTF--NILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQ 236
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI----------- 153
+ + G D A R +QM + G P + ++ N L+ C R+ + +
Sbjct: 237 GFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHT 296
Query: 154 ----LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
L++E+ K PD+ +Y +L+ S C G +AL LL EME G +TY T+
Sbjct: 297 MAIELYNEMKNK-GCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTL 355
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDA 266
++ K EEAE ++ +ME +G+ + YN I R++E L+D+M
Sbjct: 356 IDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGL--CKSRRVQEAAQLMDQMIME 413
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
GLKPD +YN ++T +C+ + +A + + + NGC P+ T+ T I LC +G + A
Sbjct: 414 GLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 473
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++ + + + + +++ L K+K+ KEA + R +++K
Sbjct: 474 SRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEK 518
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI---- 158
LI + + + A FDQM+ G R+ +++N L+ +SR + L D++
Sbjct: 355 LIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEG 414
Query: 159 --PKKYNLS----------------------------PDKISYGLLLKSHCDSGSSDKAL 188
P K+ + PD ++YG L+ C +G + A
Sbjct: 415 LKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVAS 474
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV--RIT 246
LL ++ KG+ +T Y V+ L+K+ +EA RL+ EME+KG D Y + R
Sbjct: 475 RLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGL 534
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+ GG + + EM + G P+ S+ L C M D K+ +
Sbjct: 535 SNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVD 584
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ N P+ Y +L+ GS + ++L EM+ ++ ++ K
Sbjct: 79 KQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELY 138
Query: 220 EEAERLWSEMEKK-GVDLDVAAYNVRITNTYGGDPERLKELIDE-MRDAGLKPDTISYNF 277
EE + ME + G+ LD YN + G+ +L E + M G+KPD ++N
Sbjct: 139 EEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNI 198
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK + A V E + G P+ TF T + GN D A++V KE ++
Sbjct: 199 LIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRV-KEQMLDA 257
Query: 338 KIP-DFNTVKLLVEGLVKKKKIKEAKGVI 365
P TV +LV G K+ +I+EA I
Sbjct: 258 GCPVTNVTVNVLVHGFCKEGRIEEALSFI 286
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 134/252 (53%), Gaps = 2/252 (0%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
++ +LG +V ++NAL+ ++ +D LF E+ + L P++++Y +L+ + C
Sbjct: 328 KLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR-GLEPNEVTYAILIHALCKR 386
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G + AL L ++M +KG++VT Y +++N KQG+ + A L S M K+G+ A+Y
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ I GD EL EM + G+ + ++ L+ +CK++ MDEA ++++ + +
Sbjct: 447 SPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+ PN TF I C GN KA++++ + V + PD T + L+ GL + +
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566
Query: 361 AKGVIRTIKKKF 372
A + ++ +
Sbjct: 567 ANEFVADLENSY 578
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 164/375 (43%), Gaps = 45/375 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPY 99
D+A + S + K +P ++ Y+ +A R D+ + +E H+ + I Y
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSP-----LIAGLCRNGDLSSAMELHREMAERGIAWNNY 479
Query: 100 -LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LI + + D A R FD+M + + ++FN ++ K L+D++
Sbjct: 480 TFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQM 539
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ L PD +Y L+ C + KA E + ++EN + + T +L L+++G
Sbjct: 540 VEM-GLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGR 598
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E LW EM +GV LD+ ++ + + D E+ L EM++ G+KPD I Y
Sbjct: 599 FTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTC 658
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K E M +A ++ + +G SPN T I +LC SG A + KE + +
Sbjct: 659 MIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN 718
Query: 338 KIPD---FN-------------------------------TVKLLVEGLVKKKKIKEAKG 363
+P+ +N + +L++GL K KI+EA
Sbjct: 719 VLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAID 778
Query: 364 VIRTIKKK-FPPNVL 377
++R I + F P+ +
Sbjct: 779 LMRKITESGFSPDCI 793
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 2/314 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V + +A + + +L K++RF D + L + E LI + + GM + A+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD+M + G +V +N+L+ + D+ L + K+ L+P SY L+
Sbjct: 395 LFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE-GLTPTAASYSPLIAGL 453
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C +G A+EL EM +G+ T+T ++N K +EA RL+ +M V +
Sbjct: 454 CRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNE 513
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+NV I G+ + +L D+M + GLKPD +Y L++ C + +A +
Sbjct: 514 VTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVAD 573
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
LE + N + +Y L G F + Y ++ E + D + ++V +K+
Sbjct: 574 LENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHD 633
Query: 358 IKEAKGVIRTIKKK 371
+++ + R +K++
Sbjct: 634 KEKSCVLFREMKEQ 647
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 6/335 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA +Y + + P Y + L + S + +N + L
Sbjct: 531 KAFQLYDQMVEMGLKP--DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTA 588
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G F +D+M G ++SF +++A + +K +LF E+ K+
Sbjct: 589 LLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM-KEQ 647
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I Y ++ + + +AL ++M G TVT+T ++N L K G A
Sbjct: 648 GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA 707
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM V + YN + GD E+ K+L M L +S+N L+
Sbjct: 708 ELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKG 766
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA + + E+G SP+ ++ T I+ LC G+ +KA++++ E + PD
Sbjct: 767 LCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPD 826
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPN 375
+ + + +A G+ I+ PN
Sbjct: 827 VVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPN 861
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 45/274 (16%)
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+LF+ + R + LFD++ + + D+ Y ++++C+S + D A L+ ME++
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQS-GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE 227
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--------------- 242
GV+ + V Y ++ L K +EA + + M GV D Y
Sbjct: 228 GVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMA 287
Query: 243 VRITN--------------TYGGDPERLKELIDE-------MRDAGLKPDTISYNFLMTC 281
+RIT+ ++ D R KEL++E + D G+ P+ +YN L+
Sbjct: 288 LRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDK 347
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF----KESVMVH 337
CKNE D+A ++++ + G PN T+ I+ LC G + A +F + + V
Sbjct: 348 LCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVT 407
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P +N+ L+ G K+ + A+G++ + K+
Sbjct: 408 VYP-YNS---LINGYCKQGSLDRARGLLSGMVKE 437
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+S+ +L+K C +G +A++L+ ++ G ++Y+T+++ L K G+ +A LW+E
Sbjct: 758 VSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNE 817
Query: 229 MEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
M KG+ DV AYN +R N +G + L + +R +G++P+ +Y L++
Sbjct: 818 MLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR-SGVQPNWDTYRALLS 870
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPE 254
+ G+ V T + +L L K A L+ +M + GV LD Y I + +
Sbjct: 156 SSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLD 215
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ L+ M G+K + YN LM CKN + EA +V + G + + T+RT +
Sbjct: 216 GARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLV 275
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
Y C + A ++ + + + +P +++ L KK+ ++EA
Sbjct: 276 YGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 164/330 (49%), Gaps = 9/330 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D+A + + K P Y + + L ++ R D L+ + ++ + Y
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTY--NTLICGLLRAGRIEDALKLLGTMES-VGVQPTAY 438
Query: 100 LCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N+ I +G++G A+ TF++M G ++++ NA L++ + +F+ +
Sbjct: 439 TYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGL 498
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
++ L+PD ++Y +++K + G D+A+ LL+EM G E + ++++ LYK G
Sbjct: 499 -RENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
+EA +++ M+ + V YN ++ G ++ EL + M + P+TIS+N
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-SVMV 336
L+ C+CKN+ ++ A K++ + C P+ T+ T IY L + A+ F + +
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM 677
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
H PD T+ L+ GLVK +I +A + R
Sbjct: 678 H--PDHVTICTLLPGLVKCGQIGDAISIAR 705
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 8/300 (2%)
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
E ++ N K Q Y+ L+ + G D + QM+ G V++F L+
Sbjct: 318 ELFVKMKANGHKPDQVIYI-TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
++R +D+ FD + +K + P+ +Y L+ +G + AL+LL ME+ GV+
Sbjct: 377 LCKARDFDEAFATFD-VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQP 435
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE--- 258
T TY ++ K G +A + +M+ KG+ ++ A N + + + RL+E
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL--AEMGRLREAKT 493
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+ + +R+ GL PD+++YN +M CY K +DEA + + NGC P+ + I L
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
+G D+A+++F + P T L+ GL K+ ++++A + + I+KK PN +
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTI 613
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 9/305 (2%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +C L+R AG + A++ M+ +G + ++N + +S K
Sbjct: 404 TYNTLICGLLR----AGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVET 459
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+++ K + P+ ++ L S + G +A + N + G+ +VTY ++ C
Sbjct: 460 FEKMKAK-GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTI 273
K G +EA L SEM + G + DV N I + Y G + ++ D M+D L P +
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN L++ K + +A +++E + E CSPN +F T + C + + A K+F +
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAP 393
++ PD T ++ GL+K+ K+ A +KK P+ + + GLV
Sbjct: 639 TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLP---GLVKCG 695
Query: 394 AVGDG 398
+GD
Sbjct: 696 QIGDA 700
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + AMR F++M + G + FN L+ + + LF + +
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE- 957
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +L+ C +G D+AL NE+++ G++ + Y ++N L K EEA
Sbjct: 958 GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L++EM +G+ D+ YN + N G E+ K + +E++ AGL+PD +YN L+
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTF 310
Y +E + A VY+ + +GC+PN T+
Sbjct: 1078 YSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A F M +G +FN LL +S ++ L+ E+ + PD I+Y +
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR-RCKPDAITYNI 863
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ S S + DKAL+ ++ + T TY +++ L K G EEA RL+ EM G
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ A +N+ I N YG GD E +L M + G++PD SY L+ C C +DEA
Sbjct: 924 CKPNCAIFNILI-NGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ L+ G P+ + I L S ++A ++ E +PD T L+
Sbjct: 983 LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042
Query: 352 LVKKKKIKEAK 362
L +++AK
Sbjct: 1043 LGLAGMVEQAK 1053
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 12/248 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQM---DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+I S ++ D A+ F + D TPR+ + L+ + ++ LF+E+
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRT---YGPLIDGLAKVGRLEEAMRLFEEM- 919
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
Y P+ + +L+ + G ++ A +L M N+G+ +YT +++CL G
Sbjct: 920 SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
+EA ++E++ G+D D AYN RI N G +R++E L +EMR+ G+ PD +YN
Sbjct: 980 DEALYYFNELKSTGLDPDFIAYN-RIINGLG-KSQRMEEALALYNEMRNRGIVPDLYTYN 1037
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM M+++AK++YE L+ G P+ T+ I S N + AY V+K ++
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097
Query: 337 HKIPDFNT 344
P+ T
Sbjct: 1098 GCNPNIGT 1105
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Q+G A+ + +M G S+ +++AL+ A + R + V +L E+ +
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM-EDL 256
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++ + ++ +G D+A E+ M+++G VTYT +++ L G E A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ L+ +M+ G D Y + + + + GD + KE +M G PD +++ L+
Sbjct: 317 KELFVKMKANGHKPDQVIY-ITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK DEA ++ + + G PN T+ T I L +G + A K+ V P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQP 435
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T + ++ K + +A +K K PN++
Sbjct: 436 TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 157/350 (44%), Gaps = 5/350 (1%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
T +S + L+S DP +AL + S+S+ + + + + + + L + D+
Sbjct: 83 TEIRVSEDEVLGVLKSMTDPIRALSYFYSISE-FPTVLHTTETCNFMLEFLRVHDKVEDM 141
Query: 82 ETLIE-SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+ E K + + YL + ++ G ++M + G + S+N L+
Sbjct: 142 AAVFEFMQKKIIRRDLDTYL-TIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIH 200
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+S + ++ + + L P +Y L+ + S+ + LL EME+ G+
Sbjct: 201 LLIQSGFCGEALEVYRRMVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLR 259
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
T+T + L + G +EA ++ M+ +G D+ Y V I G E KEL
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+M+ G KPD + Y L+ + +D K+ + +E +G P+ TF + LC
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ +FD+A+ F +P+ +T L+ GL++ +I++A ++ T++
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTME 429
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 135/305 (44%), Gaps = 21/305 (6%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPIL 154
++ +L L+R + +A + FD+ + LG ++ S+N L+ +K L
Sbjct: 751 EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F ++ K +PD ++ +LL H SG + EL EM ++ + +TY V++ L
Sbjct: 811 FKDM-KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYG---------GDPERLKELIDEMR 264
K N ++A + D+ + + R T TYG G E L +EM
Sbjct: 870 KSNNLDKALDFF---------YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
D G KP+ +N L+ Y K + A ++++ + G P+ ++ + LC +G D
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVE 384
+A F E PDF ++ GL K ++++EA + ++ + L + +
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 385 EELGL 389
LGL
Sbjct: 1041 LNLGL 1045
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK-GVDLDVAAYNV 243
DKA+ E+ G+ ++ L K A +++ + KK G+ +A+YN
Sbjct: 734 DKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793
Query: 244 RITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I E+ +L +M++ G PD ++N L+ + K+ + E ++Y+ +
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
C P+A T+ I L S N DKA F + V P T L++GL K +++EA
Sbjct: 854 CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 43/345 (12%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELG 127
+RRL ++ L+E+ + + + YLC LIR+ + G A R + G
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGE-APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASG 104
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P V ++N L+ R D L +P + PD +Y +++ CD G A
Sbjct: 105 APVDVFAYNTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYTPIIRGLCDRGRVGDA 160
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT- 246
L LL++M +G + + VTYT +L + K EA + EM KG ++ YNV I
Sbjct: 161 LALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIING 220
Query: 247 -----------------NTYGGDPE------------------RLKELIDEMRDAGLKPD 271
++YG P+ +K L EM D P+
Sbjct: 221 MCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN 280
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++++ L+ +C+ M++ A +V + + ++GC+PN T I +C G D AY
Sbjct: 281 EVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN 340
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
M PD + ++ GL + + + AK ++ ++K PPN
Sbjct: 341 NMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 385
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 163/363 (44%), Gaps = 19/363 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +I + +S + P Y L + L ++R+ D++ L + + E
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVL--KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
L+R + + GM + A++ QM + G TP + + + C + R+ D L +
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM--G 343
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y +PD ISY +L+ C +G + A ELL EM K VT+ T + L ++G E
Sbjct: 344 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 403
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L M + G + + YN + G + EL + + +P+TI+Y L+
Sbjct: 404 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLL 460
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T C E +D A ++ G+ + C NA TF + C G ++A ++ + +
Sbjct: 461 TGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 520
Query: 340 PDFNTVKLLVEGLVKKKKIKEA---------KGV-IRTIKKKFPPNVLRAWKKVEEELGL 389
P+ T L++G+ K +EA KGV + TI +VL + EE + +
Sbjct: 521 PNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQM 580
Query: 390 VPA 392
+ A
Sbjct: 581 LHA 583
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 161/336 (47%), Gaps = 17/336 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES--HKNDP--KITQE 97
D A D +++ + +P + Y L R L ++ R+ + L+ KN P ++T
Sbjct: 333 DDAYDFLNNMGMYGCNPDTISYTTVL--RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
++C L Q G+ + A++ + M E G ++++NAL+ C + R+ D LF+
Sbjct: 391 TFICILC----QKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV-DSALELFN 445
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+P + P+ I+Y LL C + D A ELL M K + VT+ +++ ++
Sbjct: 446 NLPCE----PNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQK 501
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
G EEA L ++M + G ++ +N + T + E EL+ + G+ DTI+Y
Sbjct: 502 GFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITY 561
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ ++ + + +EA ++ +++ G P + ++ LC D+A F V
Sbjct: 562 SSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 621
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+P+ +T +L+EGL + +KEA+ V+ + K
Sbjct: 622 NGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 657
>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g04760, chloroplastic-like [Glycine max]
Length = 531
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 6/261 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A++ D+M E+ V +N+++ C + ++ K Y
Sbjct: 165 LIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSKGY 224
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D I+Y +LL+S + G + EL+++M KG E VTY+ +++ L + G EE
Sbjct: 225 AL--DVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEG 282
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M+KKG++ D Y+ I G + E++D M G PD ++YN ++ C
Sbjct: 283 VGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 342
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-P 340
CK + DEA ++E L E GCSPNA+++ T L SG+ +A + E M+ + P
Sbjct: 343 LCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILE--MLDXVDP 400
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
D L+ L + + EA
Sbjct: 401 DVIAYNSLISCLCRDGMVDEA 421
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 134/271 (49%), Gaps = 9/271 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+RS G ++ M G +V++++ L+ + C ++ + V +L D KK
Sbjct: 234 LLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDM--KK 291
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD Y L+ C G D A+E+L+ M + G V Y T+L CL KQ A+E
Sbjct: 292 KGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADE 351
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKEL--IDEMRDAGLKPDTISYNFLM 279
A ++ ++ + G + ++YN + + G +++ L I EM D + PD I+YN L+
Sbjct: 352 ALSIFEKLGEVGCSPNASSYNT-VFSALGSSGHKVRALGMILEMLDX-VDPDVIAYNSLI 409
Query: 280 TCYCKNEMMDEAKKVYEGLE--ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+C C++ M+DEA ++ +E + C P+ ++ + LC G A +V V
Sbjct: 410 SCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKG 469
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+P+ T L+EG+ + +A+ + T+
Sbjct: 470 CLPNETTYTFLIEGIGFGGWLNDARDLATTL 500
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S GM A+ +Q+ + +V+++ L+ A D+ L DE+ +
Sbjct: 130 LIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIKLLDEM-FEI 188
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL PD Y ++ C G D+A E+++ + +KG + +TY +L L QG E
Sbjct: 189 NLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQGKWEAG 247
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L S+M KG + +V Y+V I++ G E L+ +M+ GL+PD Y+ L+
Sbjct: 248 FELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAV 307
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +D A +V + + +GC P+ + T + LC D+A +F++ V P+
Sbjct: 308 LCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPN 367
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
++ + L A G+I + P+V+
Sbjct: 368 ASSYNTVFSALGSSGHKVRALGMILEMLDXVDPDVI 403
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K SPD ++Y +L+ S C G ALE N++ + T VTYT ++ QG
Sbjct: 116 KNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGI 175
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+EA +L EM + + DV YN I G +R E+I + G D I+YN L+
Sbjct: 176 DEAIKLLDEMFEINLQPDVFPYNSIIXMCREGYVDRAFEVISSISSKGYALDVITYNILL 235
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ ++ + GC N T+ I LC G ++ + K+
Sbjct: 236 RSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLE 295
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD L+ L K+ ++ A V+
Sbjct: 296 PDGYCYDPLIAVLCKEGRVDLAIEVL 321
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 94/189 (49%), Gaps = 8/189 (4%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A ++L+ M+NKG VTY ++ L +G A +++ K+ + V Y + I
Sbjct: 108 AYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIE 167
Query: 247 NTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
T GG E +K L+DEM + L+PD YN ++ C+ +D A +V + G +
Sbjct: 168 ATLLQGGIDEAIK-LLDEMFEINLQPDVFPYNSIIX-MCREGYVDRAFEVISSISSKGYA 225
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIKEAK 362
+ T+ + L G ++ +++ + MV K + N V +L+ L + K++E
Sbjct: 226 LDVITYNILLRSLXNQGKWEAGFELMSD--MVAKGCEANVVTYSVLISSLCRDGKVEEGV 283
Query: 363 GVIRTIKKK 371
G+++ +KKK
Sbjct: 284 GLLKDMKKK 292
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 143/281 (50%), Gaps = 12/281 (4%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC + + AG+F +M E G V++++ ++ + + R ++ +F +
Sbjct: 237 LCKIGETVAAAGLFR-------KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 289
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +SP+ +Y L++ C+ +A +LNEM + + VT++ ++N K+GN
Sbjct: 290 AK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 348
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL--KELIDEMRDAGLKPDTISYNF 277
EA + M + GV+ +V Y+ + N Y E + ++L D M G KPD SYN
Sbjct: 349 FEARGVLKTMTEMGVEPNVVTYS-SLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ YCK + + EAK+++ + G +P+ ++ T I LC G +A+ +FK +
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
+PD T +L++G K+ + +A + R ++ + PN++
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMV 508
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 135/268 (50%), Gaps = 9/268 (3%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A+ F M G ++ ++N+L+ C SR + + + +E+ N+ P+ +++
Sbjct: 279 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR-WREASAMLNEM-MSLNIMPNIVTFS 336
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+ C G+ +A +L M GVE VTY++++N Q EA +L+ M K
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396
Query: 233 GVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
G DV +YN+ I N Y +R+ K+L +EM GL PD +SYN L+ C+ +
Sbjct: 397 GCKPDVFSYNILI-NGYC-KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +++ + NG P+ T+ + C G KA+++F+ + P+ +L+
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514
Query: 350 EGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
+ + K + +KEA+ + + + PNV
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNV 542
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 2/266 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ F+ M +I FN LL A + R Y I + + LSPD + +
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ D +L ++ G+++T VT+ T++N L K G +A L+ +M +G
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
DV Y I G+ L +M +AG +PD ++Y+ ++ CK+ ++EA
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ ++ G SPN T+ + I LC + +A + E + ++ +P+ T LL+
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVL 377
K+ + EA+GV++T+ + PNV+
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVV 368
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 152/334 (45%), Gaps = 10/334 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEP 98
++ALDI+S + SP + + + ++ L R+ + ++ S P I
Sbjct: 279 NEALDIFSYMKAKGISP--NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L N+ + + G A M E+G +V+++++L+ + + LFD +
Sbjct: 337 LLINI---FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K PD SY +L+ +C + +A +L NEM ++G+ V+Y T+++ L + G
Sbjct: 394 ITK-GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
EA L+ M G D+ Y++ + G + L M+ LKP+ + YN
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK+ + EA+K++ L G PN + T I LC G D+A + F+
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ + +++ G ++ K A +I +++K
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 153/341 (44%), Gaps = 10/341 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-L 100
D AL ++ + P ++ + L+ + K + + D + ++ + Y L
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSA--IVKMRHYHDAVISLSKQMELAGLSPDTYTL 160
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI + Q D ++ +LG ++++FN L+ + + + LFD++
Sbjct: 161 HMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVA 220
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD +Y ++ C G + A L +M G + VTY+T+++ L K
Sbjct: 221 R-GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
EA ++S M+ KG+ ++ YN I + R +E +++EM + P+ ++++
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGL--CNFSRWREASAMLNEMMSLNIMPNIVTFSL 337
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +CK + EA+ V + + E G PN T+ + + +A K+F +
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD + +L+ G K K+I EAK + I + P+++
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 438
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y +A A + F++M G ++S+N L+ C RL + LF +
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD-LFKNMLTN 466
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL PD +Y +LL C G KA L M++ ++ V Y +++ + K N +E
Sbjct: 467 GNL-PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKE 525
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L+SE+ +G+ +V Y I G + E M + G P+ SYN ++
Sbjct: 526 ARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIR 585
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ +++ A ++ + E G + T
Sbjct: 586 GFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 4/145 (2%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
P LC L+ + + G A R F M +++ +N L+ A +SR + L
Sbjct: 470 PDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKL 529
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F E+ + L P+ Y ++ C G D+ALE ME G +Y ++
Sbjct: 530 FSELFVQ-GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFL 588
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVA 239
+ + A +L EM +KG DVA
Sbjct: 589 QHKDESRAVQLIGEMREKGFVADVA 613
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
++RS G + A + M G SV++FN L+ F C + L + IL +++P
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDIL-EKMPM- 327
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +P+ +SY LL C D+A+E L+ M ++G VTY T+L L K G +
Sbjct: 328 HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDV 387
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +++ KG + YN I + G ER +L+DEMR GLKPD I+Y+ L++
Sbjct: 388 AVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVS 447
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +DEA K + LE G PNA T+ + + LC S D+A + P
Sbjct: 448 GLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKP 507
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
T +L+EG+ + KEA
Sbjct: 508 TEATYTILIEGIAYEGLAKEA 528
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 153/319 (47%), Gaps = 10/319 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R+ K+K+ + + ++E P + L I Y ++G D+A++ D+M+
Sbjct: 104 RIGKTKKATWVMEILEQSGAVPDVITYNVL---ISGYCKSGEIDNALQVLDRMN---VAP 157
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V+++N +L C +L + +L ++ K+ PD I+Y +L+++ C +A++
Sbjct: 158 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE--CYPDVITYTILIEATCKESGVGQAMK 215
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL+EM NKG + VTY ++N + K+G +EA + + M G +V +N+ + +
Sbjct: 216 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 275
Query: 250 G-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G ++L+ +M G P +++N L+ C+ ++ A + E + +GC+PN+
Sbjct: 276 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 335
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
++ ++ C D+A + V PD T L+ L K K+ A ++ +
Sbjct: 336 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 395
Query: 369 KKKFPPNVLRAWKKVEEEL 387
K VL + V + L
Sbjct: 396 SSKGCSPVLITYNTVIDGL 414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G + A++ D+M G +I++++L+ +R D+ F ++ +
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDL-EGL 468
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ I+Y ++ C S +D+A++ L M +K + T TYT ++ + +G A+EA
Sbjct: 469 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 528
Query: 223 ERLWSEMEKKGV 234
L +E+ +G+
Sbjct: 529 LDLLNELCSRGL 540
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 13/344 (3%)
Query: 36 RSEFDPDKALDIYSSVSKHY---ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
R D +AL + + +S+ A P + Y + +R L S+R + L+ S +
Sbjct: 88 RRGGDLRQALSLLADMSREAHPAARPNAVSYT--MVMRGLCASRRTDEAVALLRSMQASG 145
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
LIR A D A+ +M G +VI ++ LL RS + V
Sbjct: 146 VRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVS 205
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+F+E+ + + PD I + + C G KA+++ + M +G+E VTY ++NC
Sbjct: 206 KVFEEM-SRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINC 264
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-----GDPERLKELIDEMRDAG 267
L K+G+ EA L +EM+ KGV DV YN I G G L+E+I D
Sbjct: 265 LCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQG--DTL 322
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
++PD +++N ++ CK M +A V E + E GC N T+ I + A
Sbjct: 323 VEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAM 382
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ E + PD T +L+ G K ++ A+ +RT+ ++
Sbjct: 383 NLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQR 426
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 9/235 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + G A+ + M E G +++++N L+ R + L E+
Sbjct: 332 SVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISS 391
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+ D+A L M +G+ Y +L L + G E+
Sbjct: 392 -GLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQ 450
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYNF 277
A L++EM+ LD AY+ T YG GD + K+L+ +M D GL PD ++Y+
Sbjct: 451 AMVLFNEMDMN-CGLDAVAYS---TMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSI 506
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
L+ + K ++EA++V + + +G P+ F + I G +K + E
Sbjct: 507 LINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHE 561
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 9/264 (3%)
Query: 113 FDHAMRTFDQM---DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDK 168
D AM ++M D L P V++FN+++ C R+ + + E+ + +
Sbjct: 306 MDGAMGLLEEMIQGDTLVEP-DVVTFNSVIHGLCKIGRMRQAISV--REMMAERGCMCNL 362
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y L+ + A+ L++E+ + G+E + TY+ ++N K + AE
Sbjct: 363 VTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRT 422
Query: 229 MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M ++G+ ++ Y + G E+ L +EM D D ++Y+ +M CK+
Sbjct: 423 MTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGD 481
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ AK++ + + + G +P+A T+ I G+ ++A +V K+ +PD
Sbjct: 482 IKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDS 541
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKK 371
L++G + +I + +I ++ K
Sbjct: 542 LIKGYSAEGQINKILDLIHEMRAK 565
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + D A M + G + + LL A + + ++ +LF+E+
Sbjct: 403 LINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM--DM 460
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N D ++Y ++ C SG A +LL +M ++G+ VTY+ ++N K G+ EEA
Sbjct: 461 NCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEA 520
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMR 264
ER+ +M G DVA ++ I + G ++ +LI EMR
Sbjct: 521 ERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMR 563
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKK 161
L+ + Q GM + AM F++MD + ++++ +++ AC + +L D + +
Sbjct: 438 LLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDE- 495
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+PD ++Y +L+ G ++A +L +M G + +++ +G +
Sbjct: 496 -GLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINK 554
Query: 222 AERLWSEMEKKGVDLD 237
L EM K V +D
Sbjct: 555 ILDLIHEMRAKNVAID 570
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I Y G + A R D M G ++ +L+ C RL ++ LFD++ +
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL-EEASGLFDKMVE- 347
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ ++Y L+ +C+ G ++A +EM KG+ + TY +++ L+ +G E
Sbjct: 348 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 407
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A+ + EM KKG+ D YN+ I N Y G+ ++ +L +EM G++P ++Y L+
Sbjct: 408 ADDMIKEMRKKGIIPDAITYNILI-NGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 466
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ M EA ++E + + G SP+ F + C +GN ++A+ + KE
Sbjct: 467 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 526
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++G ++ K++EA+ ++ +K++
Sbjct: 527 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 558
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 138/270 (51%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G + A D+M + G SV ++N L+ A + + E+ KK
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK- 418
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I+Y +L+ + G++ KA +L NEM +KG+E T VTYT+++ L ++ +EA
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++ +GV DV +N + + G+ ER L+ EM + PD +++N LM
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 538
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ ++EA+ + + ++ G P+ ++ T I G+ A++V E + + P
Sbjct: 539 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 598
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++ L K ++ A+ +++ + K
Sbjct: 599 LLTYNALIKCLCKNQEGDLAEELLKEMVNK 628
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 8/262 (3%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
+FD + D++ + +S I F+ L+ C R D+ F + +K + P +
Sbjct: 163 LFDELTLSRDRL----SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETC 217
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L + A L EM + T T+ ++N L K+G ++A ME
Sbjct: 218 NDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEG 277
Query: 232 KGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
G +V +YN I + Y G+ E + ++D MR G++PD+ +Y L++ CK ++
Sbjct: 278 LGFKPNVVSYNT-IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 336
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +++ + E G PNA T+ T I C G+ ++A+ E V +P +T LLV
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396
Query: 350 EGLVKKKKIKEAKGVIRTIKKK 371
L + ++ EA +I+ ++KK
Sbjct: 397 HALFMEGRMGEADDMIKEMRKK 418
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 136/254 (53%), Gaps = 6/254 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G A+ F +M+ G V ++N+L+ +R+ L+ +V + + + SPD +
Sbjct: 195 GRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR-GFSPDAFT 253
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ +L+ C G +A ++L M +KG E +TY T++N L G E+A +L+ +
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+G+ L+V +YN+ I N Y D +++ E L +EMR GLKP T++YN L+ C++
Sbjct: 314 DRGIKLNVFSYNILI-NGYCKD-QKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ A+K++ ++ G +T+ + LC +G+ ++A +F+ P+ +
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431
Query: 348 LVEGLVKKKKIKEA 361
L++G+ + K++EA
Sbjct: 432 LLDGMCRAGKLEEA 445
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I S + GM A+ F +M G V+ +++L+ C RL + + F E+ +
Sbjct: 152 IIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE-FFKEMEGR 210
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S D +Y L+ +G + LN M ++G T+T +++ L K+G E
Sbjct: 211 -GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A+++ M KG + D+ YN + G E +L + + D G+K + SYN L+
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK++ +DEA +++E + G P+ T+ T I LC SG A K+F E +
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
+T +L++GL K ++EA + ++IKK + PN+
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNI 426
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 8/287 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIE--SHKN-DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
+ + L K + + + ++E HK +P I L N + GQ + A + F+ +
Sbjct: 256 ILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ---LEDATKLFESL 312
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+ G +V S+N L+ + + D+ LF+E+ K L P ++Y L+ + C SG
Sbjct: 313 ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK-GLKPSTVTYNTLIGALCQSGR 371
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
A +L EM+ G + TY +L+ L K G+ EEA L+ ++K ++ +++
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431
Query: 244 RITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ G E + DE+ GL+PDTI+YN L+ C M+ EA K+ +EE G
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
C P++ TF I +L +A ++ +E + PD +L+
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 128/258 (49%), Gaps = 5/258 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A++ FD+M E G ++ L+ ++R L +++ K N D +YG+++
Sbjct: 96 AVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMII 153
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
S C G + +AL++ +EM G+ V Y+++++ L + G +EA + EME +G+
Sbjct: 154 DSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
DV YN I + G + + ++ M D G PD ++ L+ CK + EA+++
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP-DFNTVKLLVEGLV 353
E + G P+ T+ T + LC G + A K+F ES+ I + + +L+ G
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF-ESLADRGIKLNVFSYNILINGYC 332
Query: 354 KKKKIKEAKGVIRTIKKK 371
K +KI EA + ++ K
Sbjct: 333 KDQKIDEAFRLFEEMRPK 350
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G A + + M G ++++N L+ C +L D LF+ + +
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK-LFESLADR 315
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + SY +L+ +C D+A L EM KG++ +TVTY T++ L + G
Sbjct: 316 -GIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++L+ EM+ G L ++ Y V + G E +L ++ KP+ ++ L+
Sbjct: 375 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLD 434
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ ++EA K ++ + +NG P+ + I LC G +A K+ + +P
Sbjct: 435 GMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 494
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPN 375
D T ++++ L+K+ +I EA ++ ++ + F P+
Sbjct: 495 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 5/220 (2%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K PD ++ L+K A++L +EM KG+ TY ++N L K
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
A +L +M K DV Y + I + G E L ++ EM AG+ PD + Y+ L
Sbjct: 130 LAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEAL-DMFSEMIGAGILPDVVVYSSL 187
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M C+ + EA + ++ +E G S + T+ + I+ L +G + + V
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
PD T +L++GL K+ K+ EA+ ++ + K P++L
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDIL 287
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 158/358 (44%), Gaps = 43/358 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-L 100
D+AL ++ + P +A+ LT +A K +S + +L + I + Y L
Sbjct: 56 DEALSSFNRMLHMQPPPSVVDFAKILT--SIANMKHYSTVLSL-SKQMDSLGIPSDVYTL 112
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
+I S+ D ++ +LG +F L+ C ++ + + LFD++
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALH-LFDKMV 171
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ P+ ++YG L+ C G+S A+ LL M K E +TY T+++CL+K
Sbjct: 172 GE-GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDA------------ 266
EA ++SEM KG+ +V+ YN I + + + L++EM D+
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290
Query: 267 -----------------------GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G++PD ++Y LM +C MDEA KV++ + GC
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+PN ++ T I C DKA +F+E +P+ T L+ GL ++++A
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M + +VI++N ++ + R ++ +F E+ K
Sbjct: 185 LIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAK- 243
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ +Y ++ C L+NEM + + V +TT+++ L K+G A
Sbjct: 244 GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIA 303
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M ++GV+ DV Y + + + + ++ D M G P+ ISY+ L+
Sbjct: 304 HDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLING 363
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +D+A ++E + + PN T+ T I+ LC G A +F E V +IPD
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPD 423
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
T ++L++ L K + + +A +++ I+ P++
Sbjct: 424 LVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 145/329 (44%), Gaps = 10/329 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++AL+I+S + SP S Y + L K + + TL+ + +
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNS--IIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFT 288
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
L+ + + GM A D M + G V+++ AL+ C RS + D+ +FD + +
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEM-DEADKVFDTMVR 347
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K +P+ ISY L+ +C DKA+ L EM + + VTY T+++ L G
Sbjct: 348 K-GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLR 406
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
+A L+ EM G D+ Y RI Y L + ++ + + L PD SYN
Sbjct: 407 DAIALFHEMVASGQIPDLVTY--RILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNI 464
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C+ ++ A ++ L G P+ T+ I LC G +A K+F+E
Sbjct: 465 VIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDG 524
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T L+ G ++ + A +++
Sbjct: 525 CSPDDCTYNLITRGFLRNNETLSAIQLLQ 553
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 133/267 (49%), Gaps = 7/267 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A+ F +M G +V ++N+++ + + V L +E+ + P+ + +
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS-KIMPNVVIFTT 289
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ + C G A ++++ M +GVE VTYT +++ + +EA++++ M +KG
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349
Query: 234 VDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+V +Y+ I N Y +R+ + L +EM L P+ ++YN L+ C + +
Sbjct: 350 CAPNVISYSTLI-NGYC-KIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++ + +G P+ T+R + +LC + + D+A + K + PD + ++++
Sbjct: 408 AIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVID 467
Query: 351 GLVKKKKIKEAKGVIRTIKKK-FPPNV 376
G+ + +++ A + ++ K P+V
Sbjct: 468 GMCRVGELEAAGDLFSSLSSKGLHPDV 494
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + D AM F++M + +++++N L+ C RL D + LF E+
Sbjct: 360 LINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA-LFHEMVAS 418
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +LL C + D+A+ +L +E + +Y V++ + + G E
Sbjct: 419 GQI-PDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEA 477
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+S + KG+ DV Y + I G +L EM G PD +YN +
Sbjct: 478 AGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITR 537
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+ +N A ++ + + G S +A+T T I + D++ K
Sbjct: 538 GFLRNNETLSAIQLLQEMLGRGFSADASTI-TLIVEMLSDDGLDQSVK 584
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 8/239 (3%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
LRSE D +A ++ ++ + +P Y+ + K +R L E +
Sbjct: 331 LRSEMD--EADKVFDTMVRKGCAPNVISYST--LINGYCKIQRIDKAMYLFEEMCQRELV 386
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
LI G A+ F +M G ++++ LL ++R D+ +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
I + NL+PD SY +++ C G + A +L + + +KG+ TYT ++N L
Sbjct: 447 LKAI-EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPD 271
QG EA +L+ EM G D YN+ IT + + E L +L+ EM G D
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNL-ITRGFLRNNETLSAIQLLQEMLGRGFSAD 563
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D+AL N M + + V + +L + + L +M+ G+ DV Y +
Sbjct: 56 DEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDV--YTLA 113
Query: 245 ITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I R+ ++ ++ G +PDT ++ L+ C + EA +++ +
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G PN T+ T I+ LC GN A ++ + V + P+ T +++ L K +++ EA
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233
Query: 362 KGVI-RTIKKKFPPNV 376
+ I K PNV
Sbjct: 234 LNIFSEMIAKGISPNV 249
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 164/330 (49%), Gaps = 9/330 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN-DPKITQEP 98
D D+A + + K P Y + + L ++ R D L+++ ++ + T
Sbjct: 382 DFDEAFATFDVMRKQGILPNLHTY--NTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y+ I +G++G A+ TF++M G ++++ NA L++ + +F+ +
Sbjct: 440 YI-TFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGL 498
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
++ L+PD ++Y +++K + G D+A+ LL+EM G E + ++++ LYK G
Sbjct: 499 -RENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
+EA +++ M+ + V YN ++ G ++ EL + M P+TIS+N
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-SVMV 336
L+ C+CKN+ ++ A K++ + C P+ T+ T IY L + A+ F + +
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSM 677
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
H PD T+ L+ GLVK +I +A + R
Sbjct: 678 H--PDHVTICTLLPGLVKCGQIGDAISIAR 705
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 8/300 (2%)
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
E ++ N K Q Y+ L+ + G D + QM+ G V++F L+
Sbjct: 318 ELFVKMKANGHKPDQVIYI-TLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
++R +D+ FD + +K + P+ +Y L+ +G + AL+LL+ ME+ GV+
Sbjct: 377 LCKARDFDEAFATFD-VMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQP 435
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE--- 258
T TY T ++ K G +A + +M+ KG+ ++ A N + + + RL+E
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL--AEMGRLREAKT 493
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+ + +R+ GL PD+++YN +M CY K +DEA + + NGC P+ + I L
Sbjct: 494 MFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLY 553
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
+G D+A+++F + P T L+ GL K+ ++++A + + I KK PN +
Sbjct: 554 KAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTI 613
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 9/305 (2%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +C L+R AG + A++ D M+ +G + ++ + +S K
Sbjct: 404 TYNTLICGLLR----AGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVET 459
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+++ K + P+ ++ L S + G +A + N + G+ +VTY ++ C
Sbjct: 460 FEKMKAK-GIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYS 518
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTI 273
K G +EA L SEM + G + DV N I + Y G + ++ D M+D L P +
Sbjct: 519 KVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVV 578
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN L++ K + +A +++E + CSPN +F T + C + + A K+F +
Sbjct: 579 TYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKM 638
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAP 393
++ PD T ++ GL+K+ K+ A +KK P+ + + GLV
Sbjct: 639 TVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLP---GLVKCG 695
Query: 394 AVGDG 398
+GD
Sbjct: 696 QIGDA 700
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 2/209 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + AMR F++M + G + FN L+ + + LF + +
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE- 957
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +L+ C +G D+AL NE+++ G++ + Y ++N L K EEA
Sbjct: 958 GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEA 1017
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L++EM +G+ D+ YN + N G E+ K + +E++ AGL+PD +YN L+
Sbjct: 1018 LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTF 310
Y +E + A VY+ + +GC+PN T+
Sbjct: 1078 YSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A F M +G +FN LL +S ++ L+ E+ + PD I+Y +
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISR-RCKPDAITYNI 863
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ S S + DKAL+ ++ + T TY +++ L K G EEA RL+ EM G
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYG 923
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ A +N+ I N YG GD E +L M + G++PD SY L+ C C +DEA
Sbjct: 924 CKPNCAIFNILI-NGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEA 982
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ L+ G P+ + I L S ++A ++ E +PD T L+
Sbjct: 983 LYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLN 1042
Query: 352 LVKKKKIKEAK 362
L +++AK
Sbjct: 1043 LGLAGMVEQAK 1053
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 12/248 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQM---DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+I S ++ D A+ F + D TPR+ + L+ + ++ LF+E+
Sbjct: 864 VISSLAKSNNLDKALDFFYDLVSSDFRPTPRT---YGPLIDGLAKVGRLEEAMRLFEEM- 919
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
Y P+ + +L+ + G ++ A +L M N+G+ +YT +++CL G
Sbjct: 920 SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
+EA ++E++ G+D D AYN RI N G +R++E L +EMR+ G+ PD +YN
Sbjct: 980 DEALYYFNELKSTGLDPDFIAYN-RIINGLG-KSQRMEEALALYNEMRNRGIVPDLYTYN 1037
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM M+++AK++YE L+ G P+ T+ I S N + AY V+K ++
Sbjct: 1038 SLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVD 1097
Query: 337 HKIPDFNT 344
P+ T
Sbjct: 1098 GCNPNIGT 1105
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 157/350 (44%), Gaps = 5/350 (1%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
T +S + L+S DP +AL + S+S+ + + + + + + L + D+
Sbjct: 83 TEIRVSEDEVLGVLKSMTDPIRALSYFYSISE-FPTVLHTTETCNFMLEFLRVHDKVEDM 141
Query: 82 ETLIE-SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+ E K + + YL + ++ G ++M + G + S+N L+
Sbjct: 142 AAVFEFMQKKIIRRDLDTYL-TIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIH 200
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+S + ++ + + L P +Y L+ + S+ + LL EME+ G+
Sbjct: 201 LLIQSGFCGEALEVYRRMVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLR 259
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
T+T + L + G +EA ++ M+ +G D+ Y V I G E KEL
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKEL 319
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+M+ G KPD + Y L+ + +D K+ + +E +G P+ TF + LC
Sbjct: 320 FVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ +FD+A+ F +P+ +T L+ GL++ +I++A ++ T++
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTME 429
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Q+G A+ + +M G S+ +++AL+ A + R + V +L E+ +
Sbjct: 198 LIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM-EDL 256
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++ + ++ +G D+A E+ M+++G VTYT +++ L G E A
Sbjct: 257 GLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENA 316
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ L+ +M+ G D Y + + + + GD + KE +M G PD +++ L+
Sbjct: 317 KELFVKMKANGHKPDQVIY-ITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVD 375
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK DEA ++ + + G PN T+ T I L +G + A K+ V P
Sbjct: 376 VLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQP 435
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T ++ K + +A +K K PN++
Sbjct: 436 TAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIV 473
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 135/305 (44%), Gaps = 21/305 (6%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPIL 154
++ +L L+R + +A + FD+ +LG ++ S+N L+ +K L
Sbjct: 751 EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F ++ K +PD ++ +LL H SG + EL EM ++ + +TY V++ L
Sbjct: 811 FKDM-KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA 869
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYG---------GDPERLKELIDEMR 264
K N ++A + D+ + + R T TYG G E L +EM
Sbjct: 870 KSNNLDKALDFF---------YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
D G KP+ +N L+ Y K + A ++++ + G P+ ++ + LC +G D
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVE 384
+A F E PDF ++ GL K ++++EA + ++ + L + +
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 385 EELGL 389
LGL
Sbjct: 1041 LNLGL 1045
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK-GVDLDVAAYNV 243
DKA+ E+ G+ ++ L K A +++ + KK G+ +A+YN
Sbjct: 734 DKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793
Query: 244 RITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I E+ +L +M++ G PD ++N L+ + K+ + E ++Y+ +
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
C P+A T+ I L S N DKA F + V P T L++GL K +++EA
Sbjct: 854 CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 137/276 (49%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + A+R F++M + G SV+++N+L+ C+ ++ + V ++ E +
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM--EEMED 327
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP++I++G +LK C G A + ++ M + VE V YT +++ + G E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMED 387
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M KKG+ +V YN IT + GD L+DEM++ G++ D ++YN L+
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + +A K+ + + E G PN T+ T I C GN AY++ K
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ T + ++ + K+ EA ++ + K PN
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPN 543
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 138 LLFACTRS----RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
L+ A R+ R YD + + P+ P S LL + D A +
Sbjct: 125 LVLALARASQPLRAYDAFLLAGESHPRH---RPSTSSVNALLAGLVGAKRVDLAEKAFRS 181
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN----TY 249
+ V T+ TV++ L + G +A + +++ G+ VA YN I
Sbjct: 182 ALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG 241
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ + L+ EM +AG+ P +++ L+ YCKN A +V+E +++ G + + T
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI- 368
+ + I LC G ++ K+ +E + P+ T +++G KK + +A I +
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 369 KKKFPPNVL 377
++ P+V+
Sbjct: 362 ERNVEPDVV 370
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 3/283 (1%)
Query: 91 DPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
D + E L N L+R + G A FD+M G R+V+SFN ++ R+ D
Sbjct: 233 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 292
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
L + + ++PD +YG L++ C G + A + +M +G++ V +T +
Sbjct: 293 GAETLHRRM-SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL 351
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
++ K+G+AE L EM ++GV D YN + D + ++ EMR AGL
Sbjct: 352 IDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 411
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+PDT++Y L+ YCK E +D A ++ + + G + T+ I L +G A +
Sbjct: 412 RPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAER 471
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V E + PD T ++++ +K +K +++ ++ K
Sbjct: 472 VLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 514
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 43/306 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I +AG D A +M E G V ++ AL+ R + +F+++ +
Sbjct: 280 TMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR 339
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ + + +L+ +HC G ++ LEL EM +GV VTY ++N L + + +
Sbjct: 340 -GMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKS 398
Query: 222 AERLWSEMEK-----------------------------------KGVDLDVAAYNVRIT 246
A + EM +GV LD Y I+
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ G + ++ EM +AGL+PD +Y ++ +C+ + ++ + ++ G P
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI------K 359
T+ + C G A + + + PD T +L++G K K+ K
Sbjct: 519 GVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELK 578
Query: 360 EAKGVI 365
AKG +
Sbjct: 579 SAKGTV 584
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGG 251
++ + G+ + ++ L + G A+ ++ EM+ +GV V ++N I+ G
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
D + + L M +AG+ PD +Y L+ C+ +++A+ V+E + G PNA F
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
I C G+ + ++ +E PD T +V GL + + +K A G++
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I Y G + A R D M G ++ +L+ C RL ++ LFD++ +
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL-EEASGLFDKMVE- 325
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ ++Y L+ +C+ G ++A +EM KG+ + TY +++ L+ +G E
Sbjct: 326 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 385
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A+ + EM KKG+ D YN+ I N Y G+ ++ +L +EM G++P ++Y L+
Sbjct: 386 ADDMIKEMRKKGIIPDAITYNILI-NGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 444
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ M EA ++E + + G SP+ F + C +GN ++A+ + KE
Sbjct: 445 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 504
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++G ++ K++EA+ ++ +K++
Sbjct: 505 PDEVTFNTLMQGRCREGKVEEARMLLDEMKRR 536
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 138/270 (51%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G + A D+M + G SV ++N L+ A + + E+ KK
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKK- 396
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I+Y +L+ + G++ KA +L NEM +KG+E T VTYT+++ L ++ +EA
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++ +GV DV +N + + G+ ER L+ EM + PD +++N LM
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQG 516
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ ++EA+ + + ++ G P+ ++ T I G+ A++V E + + P
Sbjct: 517 RCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPT 576
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++ L K ++ A+ +++ + K
Sbjct: 577 LLTYNALIKCLCKNQEGDLAEELLKEMVNK 606
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 8/262 (3%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
+FD + D++ + +S I F+ L+ C R D+ F + +K + P +
Sbjct: 141 LFDELTLSRDRL----SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETC 195
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L + A L EM + T T+ ++N L K+G ++A ME
Sbjct: 196 NDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEG 255
Query: 232 KGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
G +V +YN I + Y G+ E + ++D MR G++PD+ +Y L++ CK ++
Sbjct: 256 LGFKPNVVSYNT-IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 314
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +++ + E G PNA T+ T I C G+ ++A+ E V +P +T LLV
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374
Query: 350 EGLVKKKKIKEAKGVIRTIKKK 371
L + ++ EA +I+ ++KK
Sbjct: 375 HALFMEGRMGEADDMIKEMRKK 396
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 129/260 (49%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D AM+ D+M E+ + ++N+++ R D+ + I K
Sbjct: 202 LIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSK- 260
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD I+Y +LL+ + G + EL+++M +G E VTY+ +++ + + G EE
Sbjct: 261 GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEG 320
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M+KKG+ D Y+ I G + E++D M G PD ++YN ++ C
Sbjct: 321 VGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 380
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + DEA ++E L E GCSPNA+++ + L +G+ +A + E + PD
Sbjct: 381 LCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPD 440
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T L+ L + + EA
Sbjct: 441 GITYNSLISCLCRDGMVDEA 460
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R G ++ M G +V++++ L+ + C ++ + V +L D KK
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM--KK 329
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD Y L+ + C G D A+E+L+ M + G V Y T+L CL KQ A+E
Sbjct: 330 KGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADE 389
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ ++ + G + ++YN + + G R +I EM D G+ PD I+YN L++
Sbjct: 390 ALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLIS 449
Query: 281 CYCKNEMMDEAKKVYEGLE--ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
C C++ M+DEA ++ +E + C P+ ++ + LC A +V V
Sbjct: 450 CLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGC 509
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
P+ T L+EG+ + +A+ + T+
Sbjct: 510 RPNETTYTFLIEGIGFGGCLNDARDLATTL 539
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 4/264 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + +A D A + D+M G ++++N L+ + C+R L + F K
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE--FKNQLLK 189
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N P ++Y +L+++ G D+A++LL+EM ++ TY +++ + ++G +
Sbjct: 190 ENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDR 249
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ S + KG DV YN+ + G E EL+ +M G + + ++Y+ L++
Sbjct: 250 AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLIS 309
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C++ ++E + + +++ G P+ + I LC G D A +V + +P
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGV 364
D ++ L K+K+ EA +
Sbjct: 370 DIVNYNTILACLCKQKRADEALSI 393
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 118/268 (44%), Gaps = 4/268 (1%)
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LC LI + D A++ ++ G P +I++NA++ R+ D + D +
Sbjct: 94 LCTKLIHGLFTSKTIDKAIQVMHILENHGHP-DLIAYNAIITGFCRANRIDSAYQVLDRM 152
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K SPD ++Y +L+ S C G D ALE N++ + + T VTYT ++ QG
Sbjct: 153 KNK-GFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGG 211
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
+EA +L EM + + D+ YN I G +R ++I + G PD I+YN
Sbjct: 212 IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNI 271
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + ++ + GC N T+ I +C G ++ + K+
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD L+ L K+ ++ A V+
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLAIEVL 359
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L C +G+ +++L L + NKG + V T +++ L+ ++A ++ +E G
Sbjct: 64 LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG- 122
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D+ AYN IT + +++D M++ G PD ++YN L+ C M+D A +
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
L + C P T+ I G D+A K+ E + ++ PD T ++ G+
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNVL 377
++ + A +I +I K + P+V+
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVI 267
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 39/243 (16%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD + L+ S + DKA+++++ +EN G + Y ++ + + A ++
Sbjct: 90 PDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQV 148
Query: 226 WSEMEKKGVDLDVAAYNVRITN---------------------------TY--------- 249
M+ KG D+ YN+ I + TY
Sbjct: 149 LDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLL 208
Query: 250 -GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
GG E +K L+DEM + L+PD +YN ++ C+ +D A ++ + G +P+
Sbjct: 209 QGGIDEAMK-LLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVI 267
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T+ + L G ++ Y++ + V + T +L+ + + K++E G+++ +
Sbjct: 268 TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM 327
Query: 369 KKK 371
KKK
Sbjct: 328 KKK 330
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 3/283 (1%)
Query: 91 DPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
D + E L N L+R + G A FD+M G R+V+SFN ++ R+ D
Sbjct: 109 DAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLD 168
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
L + + ++PD +YG L++ C G + A + +M +G++ V +T +
Sbjct: 169 GAETLHRRM-SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTIL 227
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
++ K+G+AE L EM ++GV D YN + D + ++ EMR AGL
Sbjct: 228 IDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 287
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+PDT++Y L+ YCK E +D A ++ + + G + T+ I L +G A +
Sbjct: 288 RPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAER 347
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V E + PD T ++++ +K +K +++ ++ K
Sbjct: 348 VLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 390
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 123/305 (40%), Gaps = 43/305 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +AG D A +M E G V ++ AL+ R + +F+++ +
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR- 215
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ + + +L+ +HC G ++ LEL EM +GV VTY ++N L + + + A
Sbjct: 216 GMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 275
Query: 223 ERLWSEMEK-----------------------------------KGVDLDVAAYNVRITN 247
+ EM +GV LD Y I+
Sbjct: 276 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 335
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G + ++ EM +AGL+PD +Y ++ +C+ + ++ + ++ G P
Sbjct: 336 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPG 395
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI------KE 360
T+ + C G A + + + PD T +L++G K K+ K
Sbjct: 396 VVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEELKS 455
Query: 361 AKGVI 365
AKG +
Sbjct: 456 AKGTV 460
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
++ DAGL P+ +N LM + + A+ V++ ++ G +F T I +C +G
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ D A + + PD T L++GL + +I++A+GV + + PN +
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAV 222
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 154/326 (47%), Gaps = 7/326 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KAL + + H+ V + DL + A+ + +LI ++ +I P
Sbjct: 66 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRS-LRIGPSPKTFA 124
Query: 103 LI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ Y AG D A++ F M E G + + SFN +L +S+ +K LF + +
Sbjct: 125 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR 184
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ S D ++Y ++L C + K LE+L EM +G+ TY T+L ++ G
Sbjct: 185 F--SVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 242
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + EM+K+ ++DV Y + + +G G+ +R + + DEM G+ P +YN ++
Sbjct: 243 AWEFFLEMKKRDCEIDVVTYTT-VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMI 301
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + ++ A ++E + G PN TT+ I L +G F + ++ +
Sbjct: 302 QVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCE 361
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
P+F T +++ + ++++A G+
Sbjct: 362 PNFQTYNMMIRYYSECSEVEKALGLF 387
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 142/309 (45%), Gaps = 44/309 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ Q G+ A++ ++M E G + ++N ++ C L D ++ D I K
Sbjct: 476 LIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITK- 534
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +Y L+ +C D A+EL+N M ++G+ +TY T+LN L K +EE
Sbjct: 535 -GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEE 593
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFL 278
++ M +KG ++ YN I + + +++ E +D EM+ GL PD +S+ L
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLC--NSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 651
Query: 279 MTCYCKNEMMDEAKKVYEGLEE------------------------------------NG 302
+T +CK +D A ++ G+E+ NG
Sbjct: 652 ITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNG 711
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C P+ T+R I C +GN ++ YK E++ IP T ++ L + K++EA
Sbjct: 712 CDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAV 771
Query: 363 GVIRTIKKK 371
G+I + +K
Sbjct: 772 GIIHLMVQK 780
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 144/336 (42%), Gaps = 12/336 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ + VS+ P Y + + L + R + E + N +
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTY--NTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I Y + GM A R G ++ +L+ + D+ +F + K
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P I Y L+K C G AL+L+NEM KG + TY ++N L K G +
Sbjct: 465 -GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYN 276
A L + KG D+ YN + G +LK EL++ M G+ PD I+YN
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVD----GYCRQLKLDSAIELVNRMWSQGMTPDVITYN 579
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK +E ++++ + E GC+PN T+ T I LC S ++A + E
Sbjct: 580 TLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSK 639
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
PD + L+ G K + A G+ R ++K++
Sbjct: 640 GLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 37/309 (11%)
Query: 69 VRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+++L +F+++E L+ E N E +R YG+ G A+ TF++MD
Sbjct: 126 LQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFN 185
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
SV S+NA++ +++ ++ + K + D +Y + +KS C +G A
Sbjct: 186 CDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDK-KVESDVYTYTIRIKSFCRTGRPYAA 244
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L LL M G V Y TV+ Y+ G+ + A L+
Sbjct: 245 LRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELF--------------------- 283
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
DEM + L PD ++N L+ CK + E++++++ + + G PN
Sbjct: 284 -------------DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNL 330
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-R 366
TF +I LC G+ D+A ++ PD T ++ GL +K ++ EA+ + +
Sbjct: 331 FTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHK 390
Query: 367 TIKKKFPPN 375
+ F PN
Sbjct: 391 MVNGGFEPN 399
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 139/309 (44%), Gaps = 14/309 (4%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL + + +++ P + +L + L K SD LI I L
Sbjct: 489 ALQLMNEMAEKGCKP--DIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTL 546
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
+ Y + D A+ ++M G VI++N LL ++ ++V +F + +K
Sbjct: 547 VDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEK-G 605
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+P+ I+Y +++S C+S ++A++LL EM++KG+ V++ T++ K G+ + A
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665
Query: 224 RLWSEMEKK-GVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNF 277
L+ MEK+ V A YN+ I+ E+L L EM+ G PD +Y
Sbjct: 666 GLFRGMEKQYDVSHTTATYNIIIS----AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRV 721
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +CK +++ K E G P+ TTF + LC +A + V
Sbjct: 722 LIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKD 781
Query: 338 KIPD-FNTV 345
+PD NT+
Sbjct: 782 IVPDTVNTI 790
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ ++I+ ++++ +P Y + + L SK+ ++ L+ K+
Sbjct: 592 EEVMEIFKAMTEKGCAPNIITY--NTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFG 649
Query: 102 NLIRSYGQAGMFDHAMRTFDQMD-ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI + + G D A F M+ + + ++N ++ A + LF E+ K
Sbjct: 650 TLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEM-K 708
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K PD +Y +L+ C +G+ ++ + L E KG + T+ VLNCL + +
Sbjct: 709 KNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQ 768
Query: 221 EAERLWSEMEKKGV 234
EA + M +K +
Sbjct: 769 EAVGIIHLMVQKDI 782
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 80/219 (36%), Gaps = 38/219 (17%)
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPE 254
+G + T TY ++L L G E E L SEM + + V YG G +
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQ 172
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN------------- 301
+ + M P SYN +M + ++A KVY +++
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232
Query: 302 ----------------------GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
GC NA + T + G+ D+A ++F E +
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
PD T LV L KK + E++ + + +K+ PN+
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLF 331
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 138/310 (44%), Gaps = 43/310 (13%)
Query: 94 ITQEPYLCN------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
+ +E CN LI + G + A R F++M E G V + +++ RS
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ +LFDE+ K L P +YG L+ C +G + A L+NEM+ KG+++ V +
Sbjct: 350 VKRALVLFDEMTDK-GLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 408
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN------------------------- 242
T+++ + G +EA RL MEKKG++ DV AYN
Sbjct: 409 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 468
Query: 243 ---------VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ + Y G+ K + EM + G P+ I+YN L+ Y K M EA
Sbjct: 469 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 528
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K+ + LE G P+ T + I+ C G D A K+F E +P+ T ++ G
Sbjct: 529 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 588
Query: 352 LVKKKKIKEA 361
L K + +EA
Sbjct: 589 LSKDGRSEEA 598
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 11/318 (3%)
Query: 66 DLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
DL R A +K F + +E K I + L L+ + + G D +R F +M
Sbjct: 163 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLL-ALRRGGQVDSCLRFFRRMV 221
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
L +V S +L + + L DE+ K + + ++Y ++ +
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK-GVKANVVTYNAFIEGYFKRLDL 280
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
E+L ME +GV VTYT +++ G EEA+RL+ EM +KG++ DV Y
Sbjct: 281 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 340
Query: 245 IT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I+ N G+ +R L DEM D GL P +Y L+ CK M+ A+ + ++ G
Sbjct: 341 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGI 400
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYK---VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
N F T I C SG D+A + V ++ + + +N++ GL K + E
Sbjct: 401 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI---ASGLCKLNRKDE 457
Query: 361 AKGVIRT-IKKKFPPNVL 377
AKG++ + +++ PN +
Sbjct: 458 AKGLLFSMVERGVSPNTM 475
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG + A ++M G + + FN L+ S + D+ + + +K
Sbjct: 375 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE-ALRLQVVMEKK 433
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D +Y + C D+A LL M +GV T+++TT+++ K+GN EA
Sbjct: 434 GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 493
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+R++ EME+KG ++ YNV I + G+ + +L DE+ + GL PD + L+
Sbjct: 494 KRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 553
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + +D A K+++ + + G PN T+ I L G ++A+K++ E PD
Sbjct: 554 ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 613
Query: 342 FNTVKLLVEGL 352
LV L
Sbjct: 614 DTVYSSLVGSL 624
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 1/150 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G F A R F +M+E G ++I++N L+ ++ + L DE+ +
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR- 538
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD + L+ C G D AL+L +EM +G+ VTYT +++ L K G +EEA
Sbjct: 539 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 598
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGD 252
+L+ EM++ G+ D Y+ + + + D
Sbjct: 599 FKLYDEMKETGLTPDDTVYSSLVGSLHSAD 628
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 36/237 (15%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKG-------------------------------- 198
+ LL + + D+ +ALE ME KG
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221
Query: 199 ---VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPE 254
VEVT + T VL+ L K+G+ E +L E+ KGV +V YN I + D
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ E++ M G+ + ++Y L+ + ++EA++++E + E G + + + I
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
C SGN +A +F E IP +T L+ G+ K +++ A+ ++ ++ K
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 398
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 135/260 (51%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G A + F++M + G +++ AL+ + K L +++ +
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQ-I 314
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ ++Y L C SG D A ELL+EM KG+++ TY T++N L K GN +A
Sbjct: 315 GLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQA 374
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L EM++ G+ D Y + Y G+ + +EL+ EM D GL+P +++N LM
Sbjct: 375 VKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNG 434
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + +++ +++ + + E G PNA T+ + + C N + ++++ +PD
Sbjct: 435 LCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPD 494
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
NT +L++G K + +KEA
Sbjct: 495 SNTYNILIKGHCKARNMKEA 514
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G A +QM ++G +V+++ AL +S D L E+ +K
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK- 349
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + +Y ++ C +G+ +A++L+ EM+ G+ T+TYTT+++ YK G +A
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM +G+ V +NV + G E + L+ M + G+ P+ +YN +M
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQ 469
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M + ++Y G+ G P++ T+ I C + N +A+ + KE V
Sbjct: 470 YCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLT 529
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++ L++G K+KK+ EA+ + ++++
Sbjct: 530 ASSYNALIKGFFKRKKLLEARQLFEEMRRE 559
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S + G A +M+ G V+S+ ++ KV L E+ K
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLK- 174
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y ++ C SG + ++L EM +GV V YTT+++ K GN + A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+SEME + + D A++ I G G +L +EM G +PD ++Y L+
Sbjct: 235 YKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDG 294
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK M +A ++ + + G +PN T+ LC SG D A ++ E +
Sbjct: 295 YCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+T +V GL K I +A ++ +K+
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKE 383
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 21/300 (7%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
M ++ F + +LG + S+N L+ + R + L + K PD +SY
Sbjct: 90 MLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFK-GCIPDVVSY 148
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
++ +C G K ++L+ EM+ KG++ TY++++ L K G E E++ EM K
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208
Query: 232 KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+GV D Y I G+ + +L EM + PD+I+++ L+ + + E
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A K++ + + G P+ T+ I C G KA+ + + V + P+ T L +
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328
Query: 351 GLVKKKKIKEAKGVIRTIKKKF-----------------PPNVLRAWKKVEE--ELGLVP 391
GL K ++ A ++ + +K N+L+A K +EE E GL P
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 45/300 (15%)
Query: 81 IETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+E LI ++K+ DP + + + +AG+ + A + FD++ G S S N
Sbjct: 25 VERLIYTYKDWGSDPHVFDVFF-----QVLVEAGLLNEARKFFDKLLNYGVALSAGSCN- 78
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
L C LS + G++LK + +E
Sbjct: 79 LYLTC---------------------LSSKRDMLGMVLK-------------VFSEFPQL 104
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERL 256
GV T +Y ++N L++ G EA L ME KG DV +Y I + G+ +++
Sbjct: 105 GVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKV 164
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+L+ EM+ GLKP+ +Y+ ++ CK+ + E +KV + + G P+ + T I
Sbjct: 165 VQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDG 224
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
C GN AYK+F E +PD L+ GL K+ EA + IKK F P+
Sbjct: 225 FCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPD 284
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL-LFACTRSRLYDKVPILFDEIPKK 161
+I Y G ++ +M G ++ +++++ L C ++ + +L + + K
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM--K 208
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD + Y L+ C G++ A +L +EME + + ++ ++ ++ L G E
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++L++EM KKG + D Y I G+ ++ L ++M GL P+ ++Y L
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ +D A ++ + G N +T+ T + LC +GN +A K+ +E P
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
D T L++ K ++ +A+ ++R + + P V+
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 3/224 (1%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF E+ + + PD I++ L+ SG +A +L NEM KG E VTYT +++
Sbjct: 237 LFSEMEAR-EIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDT 272
K G ++A L ++M + G+ +V Y G+ + EL+ EM GL+ +
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN ++ CK + +A K+ E ++E G P+ T+ T + +G KA ++ +E
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+ P T +L+ GL K+++ + +++ ++K PN
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 39/263 (14%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPD 167
++G D A +M G ++ ++N ++ C + V ++ E K+ L PD
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLM--EEMKEAGLHPD 389
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
I+Y L+ ++ +G KA ELL EM ++G++ T VT+ ++N L G E+ ERL
Sbjct: 390 TITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLK 449
Query: 228 EMEKKGVDLDVAAYN-----------VRIT----------------NTYG------GDPE 254
M +KG+ + A YN +RI+ NTY
Sbjct: 450 WMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509
Query: 255 RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+KE L EM + SYN L+ + K + + EA++++E + G +A +
Sbjct: 510 NMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYN 569
Query: 312 TWIYHLCGSGNFDKAYKVFKESV 334
++ GN + ++ E++
Sbjct: 570 LFVDMNYEEGNMETTLELCDEAI 592
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 35/195 (17%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL------- 154
L+ +Y + G A +M + G +V++FN L+ C +L D +L
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455
Query: 155 -------FDEIPKKY-------------------NLSPDKISYGLLLKSHCDSGSSDKAL 188
++ I K+Y + PD +Y +L+K HC + + +A
Sbjct: 456 IMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAW 515
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
L EM K +T +Y ++ +K+ EA +L+ EM ++G+ YN+ +
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMN 575
Query: 249 Y-GGDPERLKELIDE 262
Y G+ E EL DE
Sbjct: 576 YEEGNMETTLELCDE 590
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 140/276 (50%), Gaps = 11/276 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y +G + A + F++M E V +++++ R + LFDE+ ++
Sbjct: 293 LIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQR- 351
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ +YG L+ C +G + A LL EM++KGV++ V + T ++ ++G +EA
Sbjct: 352 DIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEA 411
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL + MEKKG++ DV YN+ + K +++ M + G+KP+ +++ +
Sbjct: 412 LRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEI 471
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + EA++++ +E+ G PN T+ T I C +A+K+ E + +PD
Sbjct: 472 YCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPD 531
Query: 342 FNTVKLLVEGLVKKKKIKEA---------KGVIRTI 368
T L+ G ++ EA KG+ R +
Sbjct: 532 LYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNV 567
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 8/243 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG + A +M G +++ FN + C R ++ + + + I +K
Sbjct: 363 LIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRL--QAIMEK 420
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ D +Y +L C D+A +LN M KGV+ VT+T + K+GN E
Sbjct: 421 KGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAE 480
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
AERL+ +MEKKG ++ YN I + Y E++K+ + EM + GL PD +Y+ L
Sbjct: 481 AERLFRDMEKKGEVPNIITYNTLI-DAYC-KKEKVKQAHKIKSEMINKGLLPDLYTYSSL 538
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C +DEA K++ + G + N T+ + I L G D+A+K++ E + +
Sbjct: 539 IHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGL 598
Query: 339 IPD 341
IPD
Sbjct: 599 IPD 601
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 7/317 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
D+ R + ++ F + + + + + +E L+ + + G D +R F +M E
Sbjct: 149 DMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVE 208
Query: 126 LGTPR-SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
V S ++ R +K L DE+ K + P+ +Y LL ++
Sbjct: 209 SNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDR 268
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
E+L ME + V + TY+ ++ G+ EEAE+++ EM +K +++DV Y+
Sbjct: 269 KGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSM 328
Query: 245 IT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I+ + G+ +R L DEM + P+ +Y L+ CK M+ A+ + ++ G
Sbjct: 329 ISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV 388
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEA 361
N F T + C G D+A ++ +++M K D T +L GL K + EA
Sbjct: 389 DLNLVIFNTTMDGYCRRGKMDEALRL--QAIMEKKGINADVFTYNILANGLCKLHRYDEA 446
Query: 362 KGVIRT-IKKKFPPNVL 377
K ++ + ++K PNV+
Sbjct: 447 KCILNSMVEKGVKPNVV 463
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 140/275 (50%), Gaps = 11/275 (4%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC + + AG+F +M+E G +V+++N L+ + + +L ++ +F +
Sbjct: 210 LCKIGETTAAAGLFK-------KMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +SPD +Y L++ C+ +A LLNEM + + T+ +++ + K+G
Sbjct: 263 AK-RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL--KELIDEMRDAGLKPDTISYNF 277
EA+ ++ M + GV+ DV Y+ + Y E + ++L D M G KPD SYN
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYS-SLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ YCK + +DEAK+++ + G +P+ + T I+ LC G +A +FK
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
+PD T +L++G K+ + +A + R ++ +
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTY 475
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 39/307 (12%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P I Q L + I GQ + + QM+ G + + + L+ + + D
Sbjct: 92 PCIIQFTKLLSAIVKMGQ--YYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLA 149
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+F ++ K L PD +++ L+ C G +A+E ++ E G + T TYTT++N
Sbjct: 150 FSVFSKMIK-LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN------------------------ 247
L K G A L+ +ME+ G +V YN+ I +
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 248 ---TYGG------DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
TY + R KE L++EM + P+ ++N L+ CK + EA+ V+
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+ + E G P+ T+ + +Y +A K+F + PD + +L++G K
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388
Query: 356 KKIKEAK 362
K+I EAK
Sbjct: 389 KRIDEAK 395
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 155/366 (42%), Gaps = 51/366 (13%)
Query: 29 SKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
S K KL +E ALDI+S + SP + + ++ L +R+ + L+ +
Sbjct: 244 SLCKDKLVNE-----ALDIFSYMKAKRISP--DIFTYNSLIQGLCNFRRWKEASALL-NE 295
Query: 89 KNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
I + N L+ + + G A F M E+G V+++++L++ +
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ LFD + K PD SY +L+K +C + D+A +L NEM ++G+ V Y
Sbjct: 356 IVEARKLFDAMITK-GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYN 414
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAG 267
T+++ L + G EA+ L+ M G N+
Sbjct: 415 TLIHGLCQLGRLREAQDLFKNMHSNG--------NL------------------------ 442
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
PD +Y+ L+ +CK + +A +++ ++ P+ + I +C GN A
Sbjct: 443 --PDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPN------VLRAW 380
K+F E + +P+ ++ L K+ + EA R ++ PP+ ++R +
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGF 560
Query: 381 KKVEEE 386
+ ++E
Sbjct: 561 LQYKDE 566
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ Y +A D A + F++M G +++N L+ C RL + LF +
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD-LFKNMHSN 439
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL PD +Y +LL C G KA L M++ ++ Y +++ + K GN ++
Sbjct: 440 GNL-PDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKD 498
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L+SE+ +G+ +V Y I N G + E M G PD SYN ++
Sbjct: 499 ARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIR 558
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+ + + A ++ + + G A T TW
Sbjct: 559 GFLQYKDESRAAQLIGEMRDRGFVAEAGT-TTW 590
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 35/265 (13%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ +F+ M +I F LL A + Y I + + LSPD + +
Sbjct: 76 DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSI 135
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ D A + ++M G++ VT+ T++N L K G +A
Sbjct: 136 LIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA----------- 184
Query: 234 VDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
E D+ +G +P +Y ++ CK A
Sbjct: 185 -----------------------VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAG 221
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+++ +EE GC PN T+ I LC ++A +F PD T L++GL
Sbjct: 222 LFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLC 281
Query: 354 KKKKIKEAKGVIRTIKK-KFPPNVL 377
++ KEA ++ + PN+
Sbjct: 282 NFRRWKEASALLNEMTSLNIMPNIF 306
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 114/288 (39%), Gaps = 22/288 (7%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYA---S 57
MTSL + + T + +S ++ K +E + + YSS+ Y+
Sbjct: 296 MTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRME 355
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN--------------- 102
V +R D + + K FS LI+ + +I + L N
Sbjct: 356 IVEARKLFDAMITKGCKPDAFS-YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYN 414
Query: 103 -LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI Q G A F M G + +++ LL + K LF +
Sbjct: 415 TLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQST 474
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y L PD Y +L+ + C G+ A +L +E+ +G+ YTT++N L K+G +E
Sbjct: 475 Y-LKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDE 533
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGL 268
A + ME G D +YNV I D R +LI EMRD G
Sbjct: 534 ALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 141/307 (45%), Gaps = 12/307 (3%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDH 115
+P S+R +RRL + + L+E + + YLC LIR+ + G
Sbjct: 40 NPASAR------LRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSD 93
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R + G+P V ++N L+ R D L +P ++PD +Y L+
Sbjct: 94 AARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP----VAPDAYTYTPLI 149
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ CD G AL LL++M +G + VTYT +L + K E+A + EM KG
Sbjct: 150 RVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCT 209
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++ YNV I G + ++L++ + G +PDT+SY L+ C ++ D+ +++
Sbjct: 210 PNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEEL 269
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + E C PN TF I C G ++A +V ++ + +++ + K
Sbjct: 270 FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICK 329
Query: 355 KKKIKEA 361
+ ++ +A
Sbjct: 330 QGRVDDA 336
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 10/339 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A D+ + + + P + Y L + L SKR+ D+E L + E
Sbjct: 229 DDARDLLNRLFSYGCQPDTVSYTTLL--KGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 286
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LIR + + GM + A++ QM E + N ++ + C + R+ D L +
Sbjct: 287 MLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM--G 344
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y +PD ISY +LK C + + A ELL EM VT+ T + L ++G E
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIE 404
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A L +M++ G + V YN + G + EL R KP+TI+Y L+
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLL 461
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T C E +D A ++ + C PN TF + C G D+A ++ ++ +
Sbjct: 462 TGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT 521
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
P+ T L +G+ K ++A ++ + K P+V+
Sbjct: 522 PNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVI 560
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 170/361 (47%), Gaps = 21/361 (5%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
++TT +I ++ + R D A +++ + +P + Y ++ L +++
Sbjct: 313 CATNTTLCNIVINSICKQGRV----DDAFKFLNNMGSYGCNPDTISYTT--VLKGLCRAE 366
Query: 77 RFSDIETLIES--HKNDP--KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
R++D + L++ N P ++T ++C L Q G+ + A+ +QM E G V
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILC----QKGLIEQAIMLIEQMQEHGCTVGV 422
Query: 133 ISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+++NAL+ C + + D LF +P K P+ I+Y LL C++ D A EL+
Sbjct: 423 VTYNALVNGFCVQGHI-DSALELFRSMPCK----PNTITYTTLLTGLCNAERLDAAAELV 477
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
EM ++ VT+ ++N ++G +EA L +M + G ++ YN T
Sbjct: 478 AEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKD 537
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
E EL+ + G+ PD I+++ ++ K + ++EA +++ ++ G P A +
Sbjct: 538 CSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVY 597
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ LC D A V +P+ +T +L+EGL ++ +KEA+ ++ +
Sbjct: 598 NKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCS 657
Query: 371 K 371
+
Sbjct: 658 R 658
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 4/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + F+ AM D+M G +++++N ++ R D L + + Y
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL-FSY 241
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +SY LLK C S D EL EM K VT+ ++ + G E A
Sbjct: 242 GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ +M + + N+ I + G + + ++ M G PDTISY ++
Sbjct: 302 IQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKG 361
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ E ++AK++ + + N C PN TF T+I LC G ++A + ++
Sbjct: 362 LCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVG 421
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
T LV G + I A + R++ K PN +
Sbjct: 422 VVTYNALVNGFCVQGHIDSALELFRSMPCK--PNTI 455
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 7/214 (3%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
+PD L+++ C G + A +L E G V Y T++ + G+ + A R
Sbjct: 72 APDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARR 131
Query: 225 LWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L M V D Y +R+ G + L L+D+M G +P+ ++Y L+
Sbjct: 132 LIGSMP---VAPDAYTYTPLIRVLCDRGRVADALS-LLDDMLRRGCQPNVVTYTVLLEAM 187
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CKN ++A V + + GC+PN T+ I +C G D A + PD
Sbjct: 188 CKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDT 247
Query: 343 NTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ L++GL K+ + + + ++K PN
Sbjct: 248 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPN 281
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 13/338 (3%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDP--KITQEPYLCN---LIRSYGQAGMFDH 115
SR A + + RL S+R D+ T + + DP K +P C LI+ Y + G
Sbjct: 151 SRKALAVCLDRLVSSRRCPDVLTELLADLRDPRSKYLPQPNTCIYNILIKYYVKKGDLGT 210
Query: 116 AMRTFDQMDELGTPR---SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
A + FD+M + S+++++ L+ R + LF+++ +K + PD+++Y
Sbjct: 211 AFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTYN 270
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+ C G +KA + M E Y T++N K+G E A ++ EM +
Sbjct: 271 LLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIRS 330
Query: 233 GVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
GV D +Y V +G E + L+ EM G K D ++YN L+ CK+ + E
Sbjct: 331 GVQPDAVSYTSLVGCLCRHGNVDEGIN-LVQEMWQKGCKADVVTYNLLLEGLCKDRRIAE 389
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A + E L G N ++R + LC G +KA + + +P + +L+
Sbjct: 390 AVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLI 449
Query: 351 GLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEEL 387
GL ++ +A + + F P R W ++ E +
Sbjct: 450 GLCDVGRVSDATVTLYGLVDTGFMPEA-RCWARLIESV 486
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + A+ +M +LG S+++F +LL C +R+ D ++ +
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ + Y L+ C +G + ALELLNEME KG+ VTY T+L L G +
Sbjct: 172 Y--EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ +M K+ ++ DV + I G+ + +EL EM + + P+ ++YN ++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + + +AKK ++ + GC PN T+ T I C D+ K+F+
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
D T L+ G + K++ A + + ++ P+++
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L +L+ + Q F A+ D MD G +V+ +N ++ ++R + +F +
Sbjct: 677 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 736
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
KK + D ++Y L+ +SG A LL +M + ++ + +T +++ K+GN
Sbjct: 737 KK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 795
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA L+ EM ++ V +V YN I G K + D M G PD ++YN L
Sbjct: 796 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 855
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+T +CK++ +++ K++ + G +A T+ T I+ C +G + A KVF V
Sbjct: 856 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 915
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T +L++ L KI++A ++ ++K
Sbjct: 916 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 947
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
F+ A F +M S++ F LL A R Y+ V I F + + Y +S D S+
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISHDLYSFT 110
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ C AL +L +M G E + VT+ ++L+ +A L M K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G + +V YN I G+ EL++EM GL D ++YN L+T C + +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++ + + +P+ TF I GN D+A +++KE + P+ T ++ G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 352 LVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L ++ +AK + K PNV+
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVV 317
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G + A R M + +VI F AL+ + + L+ E+ ++
Sbjct: 750 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR- 808
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ +Y L+ C G A + + M +KG VTY T++ K E+
Sbjct: 809 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 868
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ EM +G+ D YN I G +++ + M D G+ PD ++YN L+ C
Sbjct: 869 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 928
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N +++A + E L+++ + T+ I LC + +A+ +F+ PD
Sbjct: 929 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 988
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
++ GL +K +EA + R +K+ F P+
Sbjct: 989 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G A FD M G V+++N L+ +S+ + LF E+ +
Sbjct: 819 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 878
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D +Y L+ +C +G + A ++ N M + GV VTY +L+CL G E+
Sbjct: 879 -GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 937
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A + +++K +D+D+ YN+ I D +LKE L + G+KPD I+Y +
Sbjct: 938 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTD--KLKEAWCLFRSLTRKGVKPDAIAYITM 995
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPN 306
++ C+ + EA K+ ++E+G P+
Sbjct: 996 ISGLCRKGLQREADKLCRRMKEDGFMPS 1023
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 2/250 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD + + +M+ LG + SF L+ R L ++ K P ++ G
Sbjct: 620 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKM-MKLGFRPSIVTLG 678
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL C +A+ L++ M+ G V Y TV+N L K + A ++ MEKK
Sbjct: 679 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 738
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G+ D YN I+ + G L+ +M + P+ I + L+ + K + EA
Sbjct: 739 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 798
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ +Y+ + PN T+ + I C G A +F V PD T L+ G
Sbjct: 799 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 858
Query: 352 LVKKKKIKEA 361
K K++++
Sbjct: 859 FCKSKRVEDG 868
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 41/307 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G + A+ ++M++ G V+++N LL C R D +L D + +
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N PD +++ L+ G+ D+A EL EM V+ VTY +++N L G +
Sbjct: 242 IN--PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A++ + M KG +V YN I+ + E +K L M G D +YN L+
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK-LFQRMSCEGFNADIFTYNTLI 358
Query: 280 TCYCKNEMMDEAKKVY-------------------EGLEENGCSPNA------------- 307
YC+ + A ++ GL NG +A
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 308 ---TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ I+ LC + +KA+++F + PD T +++ GL K +EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 365 IRTIKKK 371
IR +K++
Sbjct: 479 IRRMKEE 485
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I G A +TFD M G +V+++N L+ + R+ D+ LF + +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D +Y L+ +C G AL++ M ++ V +T+ +L+ L G E
Sbjct: 346 -GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +M + + + AYN+ I D E+ EL + G+KPD +Y ++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 281 CYCKNEMMDEAKKVYEGLEENG--CSPNA 307
CKN EA ++ ++E G C NA
Sbjct: 465 GLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D + L ++MEN G+ ++T +++C + A L +M K G +
Sbjct: 621 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 680
Query: 245 ITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G+ R +E L+D M G P+ + YN ++ CKN ++ A +V+ +E+
Sbjct: 681 LNGFCQGN--RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 738
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G +A T+ T I L SG + A ++ ++ V P+ L++ VK+ + EA
Sbjct: 739 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 798
Query: 362 KGVIR-TIKKKFPPNVL 377
+ + + I++ PNV
Sbjct: 799 RNLYKEMIRRSVVPNVF 815
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 134/268 (50%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A+R M++ V+ + +++ + + R + LF ++ +
Sbjct: 178 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ- 236
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ S C+ LLN+M N + V ++TV++ L K+G EA
Sbjct: 237 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 296
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M +GV+ +V YN + + + + ++ D M G P+ ISYN L+
Sbjct: 297 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 356
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + MD+A ++E + + PN T+ T ++ LC G A +F E V +IPD
Sbjct: 357 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPD 416
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++L++ L KK + EA +++TI+
Sbjct: 417 LATYRILLDYLCKKSHLDEAMALLKTIE 444
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 2/254 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD M G +VIS+N L+ + + DK LF+E+ +K L P+ ++Y
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK-ELIPNTVTYN 386
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C G A+ L +EM G TY +L+ L K+ + +EA L +E
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+D D+ Y + I G+ E +++ + GL+P+ +Y ++ C+ ++DEA
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEA 506
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K++ ++ NGCSP+ T+ T L + +A ++ +E + D +T LLVE
Sbjct: 507 NKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Query: 352 LVKKKKIKEAKGVI 365
L K + K ++
Sbjct: 567 LCDDKLDQSVKQIL 580
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 10/328 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +++S + SP Y + L + + TL+ N +
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTS--LIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ + + G A D M G +V+++NAL+ C +S + + V + +
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y +P+ ISY L+ +C DKA L EM K + TVTY T+++ L G ++
Sbjct: 343 Y--APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQD 400
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ EM G D+A Y RI Y L E L+ + + + PD Y +
Sbjct: 401 AIALFHEMVAHGQIPDLATY--RILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+ ++ A+ ++ L G PN T+ I LC G D+A K+F E
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T + +GL++ K+ A +++
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQ 546
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 14/317 (4%)
Query: 70 RRLAKSKRFSDIETLIES-----HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
R +KS F+ ++ + S H + P T + L+ S + + +QMD
Sbjct: 37 RFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVD--FNRLLTSIAKTKQYPTVFSLSNQMD 94
Query: 125 ELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
G P V + N L+ + C +R +L + K L PD ++ L++ C G
Sbjct: 95 SFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKIL--KLGLQPDTATFTTLIRGLCVEGK 152
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
AL L ++M +G + VTY T++N L K GN A RL ME+ DV Y
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT- 211
Query: 244 RITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I ++ D + + L +M G+ PD +Y L+ C + + +
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P+ F T + LC G +A+ V ++ P+ T L++G + ++ EA
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 331
Query: 362 KGVIRT-IKKKFPPNVL 377
V T + + PNV+
Sbjct: 332 VKVFDTMVHNGYAPNVI 348
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 7/265 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +M G + ++ +L+ + + V L +++ + PD + + ++
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS-KIMPDVVIFSTVV 284
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G +A ++++ M +GVE VTY +++ Q +EA +++ M G
Sbjct: 285 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 344
Query: 236 LDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+V +YN I N Y +R+ + L +EM L P+T++YN LM C + +A
Sbjct: 345 PNVISYNTLI-NGYC-KIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ + +G P+ T+R + +LC + D+A + K + PD ++++G+
Sbjct: 403 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 462
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNV 376
+ +++ A+ + + K PNV
Sbjct: 463 CRAGELEAARDIFSNLSSKGLRPNV 487
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + A+ +M +LG S+++F +LL C +R+ D ++ +
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ + Y L+ C +G + ALELLNEME KG+ VTY T+L L G +
Sbjct: 172 Y--EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ +M K+ ++ DV + I G+ + +EL EM + + P+ ++YN ++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + + +AKK ++ + GC PN T+ T I C D+ K+F+
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
D T L+ G + K++ A + + ++ P+++
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
F+ A F +M S++ F LL A R Y+ V I F + + Y +S D S+
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETV-IYFSQKMELYGISHDLYSFT 110
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ C AL +L +M G E + VT+ ++L+ +A L M K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G + +V YN I G+ EL++EM GL D ++YN L+T C + +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++ + + +P+ TF I GN D+A +++KE + P+ T ++ G
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 352 LVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L ++ +AK + K PNV+
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVV 317
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 129/307 (42%), Gaps = 41/307 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G + A+ ++M++ G V+++N LL C R D +L D + +
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N PD +++ L+ G+ D+A EL EM V+ VTY +++N L G +
Sbjct: 242 IN--PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A++ + M KG +V YN I+ + E +K L M G D +YN L+
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK-LFQRMSCEGFNADIFTYNTLI 358
Query: 280 TCYCKNEMMDEAKKVY-------------------EGLEENGCSPNA------------- 307
YC+ + A ++ GL NG +A
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 308 ---TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ I+ LC + +KA+++F + PD T +++ GL K +EA +
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 365 IRTIKKK 371
IR +K++
Sbjct: 479 IRRMKEE 485
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 4/209 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I G A +TFD M G +V+++N L+ + R+ D+ LF + +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D +Y L+ +C G AL++ M ++ V +T+ +L+ L G E
Sbjct: 346 -GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +M + + + AYN+ I D E+ EL + G+KPD +Y ++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 281 CYCKNEMMDEAKKVYEGLEENG--CSPNA 307
CKN EA ++ ++E G C NA
Sbjct: 465 GLCKNGPRREADELIRRMKEEGIICQMNA 493
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 139/255 (54%), Gaps = 2/255 (0%)
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
R + Q+ G +V S+N ++ R++L D F ++ + + P+ +++ L+
Sbjct: 415 RVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVR-GVVPNLVTFNTLING 473
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
HC G+ DKA +LL + G++ T++++++ L + EEA ++EM + G++ +
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPN 533
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
YN+ I + GD R +L+ M+ G+ PDT SYN L+ +C+ +++AKK+++
Sbjct: 534 AVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFD 593
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ +G +P+ T+ +I L SG ++A K+F PD L+++ LV+++
Sbjct: 594 SMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQE 653
Query: 357 KIKEAKGVIRTIKKK 371
++EA+ +I ++K
Sbjct: 654 YVEEAQNIIERCRQK 668
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 46/302 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G+ D A+R QM + G +V ++ L+ C SR+ + + E K
Sbjct: 220 LIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVF--ETMKD 277
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV----------------- 204
+ P++ + L+ KALELL+E ++ E V
Sbjct: 278 SGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNS 337
Query: 205 -----------------------TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+ V+ CL K E ++ + K+GV + AY
Sbjct: 338 MAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAY 397
Query: 242 NVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
I Y + E + ++ GL + SYN ++ C+C+ ++MD A + + ++
Sbjct: 398 LALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQV 457
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIK 359
G PN TF T I C G DKA K+ ES++ + + PD T +V+GL + K+ +
Sbjct: 458 RGVVPNLVTFNTLINGHCKDGAIDKARKLL-ESLLENGLKPDIFTFSSIVDGLCQIKRTE 516
Query: 360 EA 361
EA
Sbjct: 517 EA 518
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 156/419 (37%), Gaps = 83/419 (19%)
Query: 29 SKAKSKLRSEFDPDKALDIYS---SVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
S A S +++ +P A+ +S V+ A+ S A T+ R K ++ L
Sbjct: 76 SYAVSIFQNQQNPSHAIKFHSWLSHVNPTLAAHNSVHRALRNTLHR--KGPALLSVDLLR 133
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS 145
E ++T E LC L+ S+G+ G+ +++ F Q+ LG + +NAL+ A +S
Sbjct: 134 ELRNLGFRVT-EDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKS 192
Query: 146 RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
D + F ++ N D+ +Y L+ C G D+AL L+ +M++KG T
Sbjct: 193 NSIDLAYLKFQQMAAD-NCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFT 251
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMR 264
YT ++ +EA ++ M+ GV + A + + DP + EL+ E
Sbjct: 252 YTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFL 311
Query: 265 D----------------------------------------AGLKPDTISYNFLMTCYC- 283
D G P +N +M C
Sbjct: 312 DREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVK 371
Query: 284 ----------------------------------KNEMMDEAKKVYEGLEENGCSPNATT 309
KNE +E +VY L +G N +
Sbjct: 372 GAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFS 431
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ I C + D A + F++ + +P+ T L+ G K I +A+ ++ ++
Sbjct: 432 YNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESL 490
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 102/206 (49%), Gaps = 2/206 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G D A + + + E G + +F++++ + + ++ F E+ ++
Sbjct: 470 LINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEM-IEW 528
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P+ + Y +L++S C G ++++LL M+ +G+ T +Y ++ + E+A
Sbjct: 529 GINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKA 588
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L+ M + G++ D Y+ I + G E K++ M G PD+ N ++
Sbjct: 589 KKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKI 648
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNA 307
+ E ++EA+ + E + G S N+
Sbjct: 649 LVQQEYVEEAQNIIERCRQKGISLNS 674
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
GL P T YN L+ K+ +D A ++ + + C + T+ T I+ +C G D+A
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
++ ++ P+ T +L+EG ++ EA GV T+K
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMK 276
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + G A+ F +M+ G V ++N+L+ +R+ L+ +V + + +
Sbjct: 1125 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD ++ +L+ C G +A ++L M +KG E +TY T++N L G E+
Sbjct: 1185 -GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A +L+ + +G+ L+V +YN+ I N Y D +++ E +EMR GLKP T++YN L
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILI-NGYCKD-QKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C++ + A+K++ ++ G +T+ + LC +G+ ++A +F+
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH 1361
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
P+ +L++G+ + K++EA
Sbjct: 1362 KPNIEVFSILLDGMCRAGKLEEA 1384
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 137/277 (49%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + GM A+ F +M G V+ +++L+ C RL + + F E+ +
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE-FFKEMEGR 1149
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S D +Y L+ +G + LN M ++G T+T +++ L K+G E
Sbjct: 1150 -GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 1208
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A+++ M KG + D+ YN + G E +L + + D G+K + SYN L+
Sbjct: 1209 AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 1268
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK++ +DEA + +E + G P+ T+ T I LC SG A K+F E +
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 1328
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
+T +L++GL K ++EA + ++IKK + PN+
Sbjct: 1329 KLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNI 1365
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 8/282 (2%)
Query: 72 LAKSKRFSDIETLIE--SHKN-DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L K + + + ++E HK +P I L N + GQ + A + F+ + + G
Sbjct: 1200 LCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ---LEDATKLFESLADRGI 1256
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+V S+N L+ + + D+ F+E+ K L P ++Y L+ + C SG A
Sbjct: 1257 KLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK-GLKPSTVTYNTLIGALCQSGRVRTAQ 1315
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+L EM+ G + TY +L+ L K G+ EEA L+ ++K ++ +++ +
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375
Query: 249 -YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G E + DE+ GL+PDTI+YN L+ C M+ EA K+ +EE GC P++
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 1435
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
TF I +L +A ++ +E + PD +L+
Sbjct: 1436 ITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 131/276 (47%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G A + + M G ++++N L+ C +L D LF+ + +
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK-LFESLADR 1254
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + SY +L+ +C D+A EM KG++ +TVTY T++ L + G
Sbjct: 1255 -GIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 1313
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++L+ EM+ G L ++ Y V + G E +L ++ KP+ ++ L+
Sbjct: 1314 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLD 1373
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ ++EA K ++ + +NG P+ + I LC G +A K+ + +P
Sbjct: 1374 GMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 1433
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPN 375
D T ++++ L+K+ +I EA ++ ++ + F P+
Sbjct: 1434 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 117/280 (41%), Gaps = 37/280 (13%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
+FN LL + + Y V ++ +I + PD + +L+ C + +
Sbjct: 948 TFNHLLASVAKLGYYSTVFPMYRKI-NDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGG 1006
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN------ 247
+G E VT TT++ ++ + +A +L+ EM KKG+ D Y + I
Sbjct: 1007 FLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARK 1066
Query: 248 --------------------TYG---------GDPERLKELIDEMRDAGLKPDTISYNFL 278
TYG G ++ EM AG+ PD + Y+ L
Sbjct: 1067 TGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M C+ + EA + ++ +E G S + T+ + I+ L +G + + V
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
PD T +L++GL K+ K+ EA+ ++ ++ K P++L
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDIL 1226
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 151/341 (44%), Gaps = 42/341 (12%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIETL 84
IS A + ++ E DP +AL+I++ V++ S ++ YA L +LAKSK+F I+ +
Sbjct: 58 ISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATIL--HKLAKSKKFQAIDAV 115
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFACT 143
+ + E NL++ + + + + + FD + + + S+ + + L
Sbjct: 116 LHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLV 175
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV-T 202
S D K NL P+ + +L+K HC +G D A E++ EM+ V
Sbjct: 176 ESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPN 235
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYGGDP-------- 253
+TY+T++N L G +EA L+ EM K L D YN I G+
Sbjct: 236 LITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIM 295
Query: 254 ----------------------------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
E KE+ DEM+ GLKPDT+ Y L+ +C+
Sbjct: 296 EFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRA 355
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+DEA ++ + + EN C + TF + LC G F++A
Sbjct: 356 GRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEA 396
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 11/276 (3%)
Query: 94 ITQEPYLCN---LIRSYGQAGMFDHAMRTFDQM--DELGTPRSVISFNALLFA-CTRSRL 147
+ EP C L++ + + G D A ++M + P ++I+++ L+ C RL
Sbjct: 194 LNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYP-NLITYSTLINGLCGSGRL 252
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ + LF+E+ K + PD ++Y L+ C D+AL+++ M+ G Y+
Sbjct: 253 KEAIE-LFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYS 311
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRD 265
++N K+G EEA+ ++ EM+ G+ D Y I N + G + EL+ +MR+
Sbjct: 312 ALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLI-NFFCRAGRVDEAMELLKDMRE 370
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
+ DT+++N ++ C+ +EA+ + E L G N ++R + LC G K
Sbjct: 371 NKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQK 430
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
A ++ + +P F T L+ L + K+ +A
Sbjct: 431 ATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDA 466
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 160/344 (46%), Gaps = 10/344 (2%)
Query: 27 SVSKAKSKLRSEFDPDKALDIY--SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
S S+ + + S+ DP A +I+ +S+ ++ SS + + + +L +++FS ++ L
Sbjct: 13 SPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFH---ILILKLGWARQFSLMQDL 69
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
+ K++ ++I YG+A + D A++TF M + + N LL
Sbjct: 70 LMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVS 129
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
R Y + + +Y +SPD SY +L+ + C +G A L N+M + V
Sbjct: 130 HRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVE 189
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LID 261
+Y ++ L ++ A L +M KG D +Y + + ++LKE L+
Sbjct: 190 SYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSL--CRKKKLKEAYKLLC 247
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M+ G PD + YN ++ +C+ +A KV E + NGCSPN ++ T + LC G
Sbjct: 248 RMKVKGCNPDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQG 307
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+D+A +E + P F+ L+ G K++EA V+
Sbjct: 308 LYDEAKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVL 351
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G+ PDT SYN LM+ +C N + A ++ + + +P+ ++R + LC ++A
Sbjct: 148 GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQVNRA 207
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ ++ + +PD + L+ L +KKK+KEA ++ +K K
Sbjct: 208 VDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVK 252
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 138/310 (44%), Gaps = 43/310 (13%)
Query: 94 ITQEPYLCN------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
+ +E CN LI + G + A R F++M E G V + +++ RS
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ +LFDE+ K L P +YG L+ C +G + A L+NEM+ KG+++ V +
Sbjct: 346 VKRALVLFDEMTDK-GLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 404
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN------------------------- 242
T+++ + G +EA RL MEKKG++ DV AYN
Sbjct: 405 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 464
Query: 243 ---------VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ + Y G+ K + EM + G P+ I+YN L+ Y K M EA
Sbjct: 465 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 524
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K+ + LE G P+ T + I+ C G D A K+F E +P+ T ++ G
Sbjct: 525 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 584
Query: 352 LVKKKKIKEA 361
L K + +EA
Sbjct: 585 LSKDGRSEEA 594
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 11/318 (3%)
Query: 66 DLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
DL R A +K F + +E K I + L L+ + + G D +R F +M
Sbjct: 159 DLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLL-ALRRGGQVDSCLRFFRRMV 217
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
L +V S +L + + L DE+ K + + ++Y ++ +
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK-GVKANVVTYNAFIEGYFKRLDL 276
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
E+L ME +GV VTYT +++ G EEA+RL+ EM +KG++ DV Y
Sbjct: 277 GGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSI 336
Query: 245 IT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I+ N G+ +R L DEM D GL P +Y L+ CK M+ A+ + ++ G
Sbjct: 337 ISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGI 396
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYK---VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
N F T I C SG D+A + V ++ + + +N++ GL K + E
Sbjct: 397 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI---ASGLCKLNRKDE 453
Query: 361 AKGVIRT-IKKKFPPNVL 377
AKG++ + +++ PN +
Sbjct: 454 AKGLLFSMVERGVSPNTM 471
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG + A ++M G + + FN L+ S + D+ + + +K
Sbjct: 371 LIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDE-ALRLQVVMEKK 429
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D +Y + C D+A LL M +GV T+++TT+++ K+GN EA
Sbjct: 430 GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 489
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+R++ EME+KG ++ YNV I + G+ + +L DE+ + GL PD + L+
Sbjct: 490 KRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 549
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + +D A K+++ + + G PN T+ I L G ++A+K++ E PD
Sbjct: 550 ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 609
Query: 342 FNTVKLLVEGL 352
LV L
Sbjct: 610 DTVYSSLVGSL 620
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 36/237 (15%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKG-------------------------------- 198
+ LL + + D+ +ALE ME KG
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217
Query: 199 ---VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPE 254
VEVT + T VL+ L K+G+ E +L E+ KGV +V YN I + D
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ E++ M G+ + ++Y L+ + ++EA++++E + E G + + + I
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
C SGN +A +F E IP +T L+ G+ K +++ A+ ++ ++ K
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 394
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 139/279 (49%), Gaps = 8/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR +AG A+ +DE V FN L+ + D+ LF+ + +
Sbjct: 68 LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM-ESS 126
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNAE 220
+ P+ ++Y ++ C SG+ +KA ELL EM KG + VTY T++N Y+
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA +M+ G++ DV N+ ++ GD E E++D M+ AG PD I+YN ++
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C + EA ++ L+ CSP+ TF T + C +G +A +V +E + +
Sbjct: 247 HALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL 303
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
PD T +LV GL + +++ A ++ I ++ + P+V+
Sbjct: 304 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 147/333 (44%), Gaps = 7/333 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D ++AL+I + A PV + + L + + + ++++ P +
Sbjct: 219 DVEEALEILDGMK--LAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVT--- 273
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L+ + +AGM A+ ++M VI++ L+ R L +EI
Sbjct: 274 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 333
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ + PD I+Y L+ C SG ++A +L+ EM +G V Y+++++ + GN
Sbjct: 334 RQGYI-PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A + +EM + + YN+ + G + LI ++ G PD ++YN L
Sbjct: 393 HKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + EA + + + GC PN T + ++ LC G D A+ + E
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ L++GL K ++ +A V+ ++ +
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQ 545
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 130/259 (50%), Gaps = 5/259 (1%)
Query: 114 DHAMRTFDQMDEL-GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD E G V S+N LL +S + + ++ ++ SP+ +++
Sbjct: 8 DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHS-GCSPNLVTFK 66
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L++ +C +G + +ALE L ++ V + +++ L+K GN ++A +L+ ME
Sbjct: 67 ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK--PDTISYNFLMTCYCKNEMMD 289
V ++ YN I+ G+ E+ +EL++EM G K PD ++YN L+ + + +
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA E ++ G +P+ T + +C G+ ++A ++ + +PD T ++
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246
Query: 350 EGLVKKKKIKEAKGVIRTI 368
L K+ EA +++T+
Sbjct: 247 HALCVAGKVVEAAEILKTM 265
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 42/287 (14%)
Query: 94 ITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKV 151
I + CN L+ + G + A+ D M G VI++N+++ A C ++ +
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
IL K + SPD +++ LL C +G +ALE+L EM + + +TYT ++N
Sbjct: 260 EIL-----KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVN 314
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPD 271
L + G + VA Y L++E+ G PD
Sbjct: 315 GLCRVGQVQ-----------------VAFY-----------------LLEEIVRQGYIPD 340
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
I+Y L+ CK+ ++EA K+ + + GC + + + C +GN KA ++
Sbjct: 341 VIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILA 400
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
E V ++ +P T +++ GL+K I +A +I + + + P+V+
Sbjct: 401 EMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVV 447
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 4/251 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L+ ++G + A + +M G V+ +++L+ C ++ IL + +
Sbjct: 346 SLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV-- 403
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N+ P +Y ++L GS KA+ L++++ +G VTY T+++ L K
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463
Query: 221 EAERLWSEMEKKGV-DLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L EM +G DV +V G + L+ EM P+ + Y L+
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK++ MD+A V + + G + + +R I + G +A ++ E V +
Sbjct: 524 DGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFL 583
Query: 340 PDFNTVKLLVE 350
PD +T K L E
Sbjct: 584 PDGSTSKTLEE 594
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 6/239 (2%)
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
RS D FD ++ D SY LL SG + ++ ++ + G
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE 262
VT+ ++ K G A A +++ V DV +NV I + G+P++ +L +
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG--CSPNATTFRTWIYHLCGS 320
M + +KP+ ++YN +++ CK+ +++A+++ E + G +P+ T+ T I +
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 321 GNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNVL 377
+A F+E + I PD T +LV G+ K ++EA ++ +K P P+V+
Sbjct: 183 SRIREACA-FREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 2/267 (0%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
+Y + G+ D AM F++M + G +S+ AL+ A + D + F+++ + ++
Sbjct: 387 AYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE-GVT 445
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD + + L+ C +K EL EM N G+ V + T+L L K+G E +RL
Sbjct: 446 PDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505
Query: 226 WSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+E GV DV +YN I + G + +L++ M GLKPD+ SYN L+ YCK
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCK 565
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+D A + + NG +P T+ T ++ L + F +A +++ + D T
Sbjct: 566 AGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYT 625
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+++ GL K + EA + + + K
Sbjct: 626 YNIILNGLCKSNCVDEAIKMFQNLCSK 652
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y G + M G + FN A + + DK +F+++ ++
Sbjct: 349 MLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKM-RQQ 407
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD +SYG L+ + C G D A N+M N+GV V +++++ L E+
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L+ EM G+ ++ +N + N G + L+D + G++PD ISYN L+
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C +DEA K+ EG+ G P++ ++ T ++ C +G D AY F++ + P
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL + K+ EAK
Sbjct: 588 VVTYNTILHGLFQTKRFSEAK 608
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 150/333 (45%), Gaps = 10/333 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+DI++ + + SP + Y + L K R D E N+
Sbjct: 395 DKAMDIFNKMRQQGLSPDAVSYGA--LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFS 452
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L+ ++ F +M +G +++ FN +L C R+ + L D I +
Sbjct: 453 SLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQR-LVDSI-E 510
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD ISY L+ HC +G+ D+A +LL M + G++ + +Y T+L+ K G +
Sbjct: 511 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNF 277
A + +M G+ V YN + + +R KEL M ++G K D +YN
Sbjct: 571 SAYSHFRKMLSNGITPGVVTYNTILHGLF--QTKRFSEAKELYLNMINSGTKWDIYTYNI 628
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK+ +DEA K+++ L G N TF I L G + A +F
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ + T +L+VE L+++ ++E + ++K
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEK 721
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 134/302 (44%), Gaps = 8/302 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQ 122
++ ++ L KR + L+ +D + P + + +I + G D F +
Sbjct: 169 NILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLE 228
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M + G P V+++ ++ +++L+D+ +F ++ + P+ +Y L+ + G
Sbjct: 229 MMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN-GVKPNIDTYNCLIHGYLSIG 287
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ + +L EM G + TY ++LN L K G EA + M KG+ V Y
Sbjct: 288 KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYG 347
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ + G + +L++ M G+ P+ +N + Y K ++D+A ++ + +
Sbjct: 348 IMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV---KKKKI 358
G SP+A ++ I LC G D A F + + PD LV GL K +K+
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467
Query: 359 KE 360
+E
Sbjct: 468 EE 469
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 149/376 (39%), Gaps = 49/376 (13%)
Query: 44 ALDIYSSVSKHY--ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEP 98
AL ++ + H AS V+ + R + S+ ET++ D I P
Sbjct: 33 ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92
Query: 99 YLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL 154
C LI + + G +H F + + G I N LL C R+ + + +L
Sbjct: 93 NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN---------------------- 192
+P+ PD +SY +LLK C+ +++ALELL+
Sbjct: 153 LQRMPE-LGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211
Query: 193 ----------------EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
EM ++G+ VTYTTV++ L K + AE ++ +M GV
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271
Query: 237 DVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
++ YN I G + + +++EM G KP+ +Y L+ CKN EA+ +
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+ + G P+ TT+ ++ G + + + V P+ + + K
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391
Query: 356 KKIKEAKGVIRTIKKK 371
I +A + ++++
Sbjct: 392 GIIDKAMDIFNKMRQQ 407
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 6/273 (2%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LCNL + G R D ++ +G VIS+N L+ + D+ L + +
Sbjct: 490 LCNLCKE----GRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMV 545
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
L PD SY LL +C +G D A +M + G+ VTY T+L+ L++
Sbjct: 546 S-VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRF 604
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFL 278
EA+ L+ M G D+ YN+ + + + ++ + GL+ + I++N +
Sbjct: 605 SEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIM 664
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ K ++A ++ + NG N T+R + +L G+ ++ +F
Sbjct: 665 IGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGT 724
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ + LV L+ + I A + + ++
Sbjct: 725 APNSQMLNALVRRLLHRGDISRAGAYLSKLDER 757
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 135/319 (42%), Gaps = 51/319 (15%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS--------------RLYDKV-- 151
G G+ D A++ FD++ P SV++FN LL A +RS L++++
Sbjct: 26 GSLGLGD-ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVR 84
Query: 152 -------------PILFDEIPKKYNLSPDKISYGLLLKSH---------------CDSGS 183
IL + +L ++GL+LK+ CD
Sbjct: 85 DCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKR 144
Query: 184 SDKALE-LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV---DLDVA 239
+A++ LL M G TV+Y +L L + AEEA L M V +V
Sbjct: 145 VGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVV 204
Query: 240 AYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+Y+ I + G ++ L EM D G+ PD ++Y ++ CK ++ D A+ V++ +
Sbjct: 205 SYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQM 264
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+NG PN T+ I+ G + + ++ +E P+ T L+ L K +
Sbjct: 265 IDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRC 324
Query: 359 KEAKGVIRT-IKKKFPPNV 376
+EA+ + I K P+V
Sbjct: 325 REARFFFDSMIGKGIKPSV 343
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 15/258 (5%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
Q F A + M GT + ++N +L +S D+ +F + K L +
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSK-GLQLNI 658
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
I++ +++ + G + A++L + G+ VTY V+ L ++G+ EE + L+S
Sbjct: 659 ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSA 718
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
MEK G + N + + GD R + ++ + + + + L++ + +E
Sbjct: 719 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEY 778
Query: 288 MDEAK---KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
AK K Y L E S R D AY +F+E +M PD T
Sbjct: 779 QHHAKSLPKKYRILNEANSSALIKKAR----------RIDDAYSLFREMLMKGLTPDVVT 828
Query: 345 VKLLVEGLVKKKKIKEAK 362
++ GL + + EAK
Sbjct: 829 YNTILHGLFQTGRFSEAK 846
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 1/156 (0%)
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
++A L+ EM KG+ DV YN + + G KEL M ++ + + +YN +
Sbjct: 808 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNII 867
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK+ +DEA K+++ L G N TF I L G + A +F
Sbjct: 868 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGL 927
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+PD T +L+ E L+++ ++E G+ T++K P
Sbjct: 928 VPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTP 963
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
++R D LF E+ K L+PD ++Y +L +G +A EL M N ++
Sbjct: 803 KARRIDDAYSLFREMLMK-GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNI 861
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE 262
TY +LN L K +EA +++ + KG+ L++ +N+ I GG E +L
Sbjct: 862 YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 921
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
+ GL PD ++Y + + ++E ++ +E++G ++ + L G+
Sbjct: 922 IPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGD 981
Query: 323 FDKA 326
+A
Sbjct: 982 ISRA 985
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 3/169 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPR 130
L ++ RFS+ + L S N + Y N+I ++ D A + F + G
Sbjct: 836 LFQTGRFSEAKELYLSMINS-RTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++I+FN ++ A + + LF IP L PD ++Y L+ ++ + GS ++ L
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPAN-GLVPDVVTYRLVAENLIEEGSLEEFDGL 953
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
ME G + + ++ L ++G+ A S++++K L+ +
Sbjct: 954 FLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAS 1002
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 12/284 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ +AG F A+ F + +I+FN L+ A +S ++ +F+ +
Sbjct: 70 GVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTS 129
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++Y ++ C G D+A+ELL+ M G +TY+ ++ L K G ++
Sbjct: 130 SQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
L EM ++G DV YN + RL E L+ M +G P ++YN L
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLC--KSRRLDEALELVQLMIRSGCYPTVVTYNSL 247
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M +C+++ +D A ++ + + E GC P+ + T I LC D A + K+ V
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 339 IPDFNTVKLLVEGLVK------KKKIKEAKGVIRTIKKK-FPPN 375
+PD T +++GL K K++ A ++ +K+ PPN
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPN 351
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 145/326 (44%), Gaps = 11/326 (3%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCN 102
AL + +V+ +P + ++ V L KS R + + ES H + +
Sbjct: 84 ALGYFKTVAGTKCTPDIITF--NILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A+ D M+E G +VI+++ L+ ++ DK L E+ ++
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR- 200
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I Y LL C S D+ALEL+ M G T VTY +++ + + A
Sbjct: 201 GFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRA 260
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL M ++G DV YN I + + L+ +M A PD I+Y+ ++
Sbjct: 261 FRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDG 320
Query: 282 YCKNEMMDE------AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
CK+ +D A ++ E +++ GC PNA T+ I LC + +A + + +
Sbjct: 321 LCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMID 380
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
+PD ++ +++ L K + A
Sbjct: 381 SEVVPDLSSFSMVIGSLCKSHDLDAA 406
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 3/215 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P++ +YG L+ C +G D+A ELL+EM ++G+ + V+ L K G +A
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87
Query: 226 WSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAG-LKPDTISYNFLMTCYC 283
+ + D+ +N+ + G E ++ + M + P+ ++Y ++ C
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K+ +D A ++ + + E GC PN T+ + LC +G DK + + +E PD
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 344 TVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
L+ GL K +++ EA +++ I+ P V+
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVV 242
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 152/344 (44%), Gaps = 25/344 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQE 97
DK + +++ P Y + + L KS+R + ++ +I S +T
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMY--NTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
+L+ + ++ D A R M E G P VI++N ++ C +RL D +L
Sbjct: 246 ----SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDK------ALELLNEMENKGVEVTTVTYTTVL 210
+ + PD I+Y ++ C D A E+L M+ G TY V+
Sbjct: 302 MVAAR--CVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
L + +++A L M V D++++++ I + D + ++ M + K
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ ++Y L+ K +D+A +V+E + E+ P T+ + + LCG G ++A ++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGVATYNSVLDGLCGVGRIEEAVRM 478
Query: 330 FKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ M+HK PD + L+ GL + ++EA + + ++ K
Sbjct: 479 VEG--MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 115/279 (41%), Gaps = 39/279 (13%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI +AG D A D+M + G P V N ++ C R D + + +
Sbjct: 35 SLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALG--YFKTVA 92
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV-TTVTYTTVLNCLYKQGNA 219
+PD I++ +L+ + SG ++A ++ M + VTYTTV+N L K G
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ R EL+D M + G P+ I+Y+ L+
Sbjct: 153 D----------------------------------RAIELLDLMNETGCCPNVITYSVLV 178
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK D+ + + + G P+ + T + LC S D+A ++ + +
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P T L+E + K++ A +I+ + ++ PP+V+
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVI 277
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G D A+R F+ M E P V ++N++L C R+ + V ++ I K+
Sbjct: 428 LIDGLSKGGEVDKAVRVFELMVESFRP-GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD SYG L++ C ++A EL +E KG + Y ++N L K+ +
Sbjct: 487 --CFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSD 544
Query: 222 AERLWSEMEKKG 233
A + +++ + G
Sbjct: 545 AHGVANKLIEAG 556
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 9/173 (5%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL---EL 190
SF+ ++ + +S D +F + ++ P+ ++Y L+ G DKA+ EL
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSER-ECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
+ E GV TY +VL+ L G EEA R+ M K D A+Y I
Sbjct: 448 MVESFRPGV----ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCR 503
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
E EL + G + YN L+ CK + + +A V L E G
Sbjct: 504 VSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 172/359 (47%), Gaps = 14/359 (3%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF 78
SS+ + I S + S D D A+ +++ + + +P + + + L L KSK +
Sbjct: 46 SSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILG--SLVKSKHY 103
Query: 79 SDIETL---IESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+ L +E P + CN LI + Q G+ A F ++ ++G + I+
Sbjct: 104 HTVLYLSKKMEFRGIKPNLVN----CNILINCFCQLGLIPFAFSVFAKILKMGYNPNTIT 159
Query: 135 FNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
F L+ C + +++ + F + ++ISYG L+ C G + AL+LL
Sbjct: 160 FTTLIKGLCLKGQIHQALN--FHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRR 217
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
++ K V+ V Y+T+++ + K + +A L+SEM KG+ +V Y+ I+ + G
Sbjct: 218 VDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGK 277
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ +L ++M +KPD ++N L+ +CK+ + A K+ + + + G PN T+ +
Sbjct: 278 LKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSS 337
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ LC + DKA + + P+ +T +L++GL K+++A+ + + K
Sbjct: 338 ILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVK 396
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 7/223 (3%)
Query: 115 HAMRTFDQMDEL---GTPRSVISFNALLFAC-TRSRLYDKVPILFDEIPKKYNLSPDKIS 170
H FD E+ G +V++++AL+ T +L D V LF+++ + N+ PD +
Sbjct: 242 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVD-LFNKMISE-NIKPDVYT 299
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ +L+ C SG AL+L++EM ++G VTY+++L+ L K ++A L ++++
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+G+ ++ Y + I G E + + +++ G ++Y + +CK + D
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFD 419
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
EA + +EENGC P+A T+ L G D A K+ +E
Sbjct: 420 EASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 136/326 (41%), Gaps = 10/326 (3%)
Query: 54 HYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMF 113
+Y PVS + + K+ F+ I + KI PY + ++
Sbjct: 16 YYVVPVSHFVPKKFPSFQFLKNTHFNFIPC------SSSKINLIPY-SSTSTTFHSNNDV 68
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ F+ + I FN +L + +S+ Y V L ++ + + P+ ++ +
Sbjct: 69 DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFR-GIKPNLVNCNI 127
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A + ++ G T+T+TT++ L +G +A ++ G
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ +Y I G+ +L+ + ++P+ + Y+ ++ CK++ +++A
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+Y + G SPN T+ I G A +F + + + PD T +LV+
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVF 307
Query: 353 VKKKKIKEAKGVIRTIKKKF-PPNVL 377
K KI A ++ + + PPN++
Sbjct: 308 CKSGKISYALKLVDEMHDRGQPPNIV 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 44/227 (19%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLT-VRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
+ A D+YS + SP Y+ ++ + K K D+ + S P + Y
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDV----YT 299
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA------------------ 141
N L+ + ++G +A++ D+M + G P ++++++++L A
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359
Query: 142 ------------------CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
CT +L D I D + K Y+++ ++Y ++ C G
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDIT--VVTYIVMFYGFCKKGL 417
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
D+A LL++ME G TY + L+K+G + AE+L E E
Sbjct: 418 FDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECE 464
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 12/281 (4%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC + + AG+F +M E G V++++ ++ + + R ++ +F +
Sbjct: 20 LCKIGETVAAAGLFK-------KMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMK 72
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +SP+ +Y L++ C+ +A +LNEM + + VT++ ++N K+GN
Sbjct: 73 AK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 131
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL--KELIDEMRDAGLKPDTISYNF 277
EA + M + GV+ +V Y+ + N Y E ++L D M G KPD SYN
Sbjct: 132 FEARGVLKTMTEMGVEPNVVTYS-SLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNI 190
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ YCK + + EAK+++ + G +P+ ++ T I LC G +A+ +FK +
Sbjct: 191 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 250
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
+PD T +L++G K+ + +A + R ++ + PN++
Sbjct: 251 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMV 291
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 139/276 (50%), Gaps = 10/276 (3%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A+ F M G ++ ++N+L+ C SR + + + +E+ N+ P+ +++
Sbjct: 62 NEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR-WREASAMLNEM-MSLNIMPNIVTFS 119
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+ C G+ +A +L M GVE VTY++++N Q EA +L+ M K
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 233 GVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
G DV +YN+ I N Y +R+ K+L +EM GL PD +SYN L+ C+ +
Sbjct: 180 GCKPDVFSYNILI-NGYC-KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 237
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +++ + NG P+ T+ + C G KA+++F+ + P+ +L+
Sbjct: 238 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 297
Query: 350 EGLVKKKKIKEAKGVIRTI-KKKFPPNVLRAWKKVE 384
+ + K + +KEA+ + + + PN ++ WK E
Sbjct: 298 DAMCKSRNLKEARKLFSELFVQGLQPN-MKHWKLFE 332
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +Y ++ C G + A L +M G + VTY+T+++ L K EA +
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCY 282
+S M+ KG+ ++ YN I + R +E +++EM + P+ ++++ L+ +
Sbjct: 68 FSYMKAKGISPNIFTYNSLIQGL--CNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK + EA+ V + + E G PN T+ + + +A K+F + PD
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ +L+ G K K+I EAK + I + P+++
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 221
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 35/185 (18%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP 253
M +G + TYTT++N L K G A L+ +M + G
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGC------------------- 41
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+PD ++Y+ ++ CK+ ++EA ++ ++ G SPN T+ +
Sbjct: 42 ---------------QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSL 86
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-F 372
I LC + +A + E + ++ +P+ T LL+ K+ + EA+GV++T+ +
Sbjct: 87 IQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGV 146
Query: 373 PPNVL 377
PNV+
Sbjct: 147 EPNVV 151
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 11/286 (3%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y A+ DQM E+G ++FN L+
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + + PD +YG ++ C G D AL LL +ME +E V Y T+
Sbjct: 204 EAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYG--GDPERLKELIDEMRD 265
++ L K + ++A L+++ME KG+ DV YN I+ YG D R L+ +M +
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR---LLSDMIE 319
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
+ P+ +++N L+ + K + EA+K+++ + + PN T+ + I C D+
Sbjct: 320 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 379
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
A ++F V +PD T L++G K K+++E + R + ++
Sbjct: 380 AQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 144/290 (49%), Gaps = 6/290 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ +M++ +V+ +N ++ + + D LF+++ K + PD +
Sbjct: 235 GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFT 293
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ C+ G A LL++M + + VT+ ++++ K+G EAE+L+ EM
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
++ +D ++ YN I D + +++ M PD ++YN L+ +CK + ++
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
E +++ + + G N T+ T I L +G+ D A K+FK+ V PD T +L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473
Query: 350 EGLVKKKKIKEAKGVIRTIKK-KFPPNVLRAWKKVEEELGLVPAPAVGDG 398
+GL K K+++A V ++K K PN+ +E G+ A V DG
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIE---GMCKAGKVEDG 520
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 150/312 (48%), Gaps = 15/312 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
D A D+++ + P Y ++ L R+SD L+ K +P +
Sbjct: 273 DDAFDLFNKMETKGIKPDVFTYNSLISC--LCNYGRWSDASRLLSDMIERKINPNVVT-- 328
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+LI ++ + G A + FD+M + +++++N+L+ C RL D+ +F
Sbjct: 329 -FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTL 386
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K L PD ++Y L+K C + ++ +EL EM +G+ TVTY T++ L++ G
Sbjct: 387 MVSKDCL-PDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 445
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYN 276
+ + A++++ +M GV D+ Y++ + G E+ + + ++ + ++P+ +YN
Sbjct: 446 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYN 505
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK +++ ++ L G PN + T I C G ++A +F+E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 565
Query: 337 HKIPD---FNTV 345
+PD +NT+
Sbjct: 566 GTLPDSGCYNTL 577
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 128/270 (47%), Gaps = 2/270 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G + A R M E +V++FN+L+ A + + LFDE+ ++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ P+ ++Y L+ C D+A ++ M +K VTY T++ K EE
Sbjct: 356 -SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEE 414
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM ++G+ + YN I + GD + +++ +M G+ PD I+Y+ L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 474
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +++A V+E L+++ PN T+ I +C +G + + +F + P
Sbjct: 475 GLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ ++ G +K +EA + R +K+
Sbjct: 535 NVIIYTTMISGFCRKGLKEEADALFREMKE 564
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + +QM LG P + +++ LL C RS+L + +L +
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLG 146
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ LL +C +A+ L+++M G + TVT+ T+++ L+ A E
Sbjct: 147 Y--EPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASE 204
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M +G D+ Y + GD + L+ +M ++ + + YN ++
Sbjct: 205 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIID 264
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + MD+A ++ +E G P+ T+ + I LC G + A ++ + + P
Sbjct: 265 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ K+ K+ EA+ + I++ PN++
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 362
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
++ K+KR + L + LI+ QAG D A + F +M G
Sbjct: 403 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 462
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
P +I+++ LL + +K ++F E +K + P+ +Y ++++ C +G +
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVF-EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGW 521
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+L + KGV+ + YTT+++ ++G EEA+ L+ EM++ G D YN I
Sbjct: 522 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 581
Query: 248 TYGGDPERLKELIDEMRDAGLKPD--TIS 274
GD ELI EMR G D TIS
Sbjct: 582 LRDGDKAASAELIKEMRSCGFVGDASTIS 610
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 13/236 (5%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D LF E+ K P I + LL + D + L +M+N G+ TY+
Sbjct: 63 DDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRD 265
+LNC ++ A + +M K G + D+ + + G +R+ E L+D+M +
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG--KRISEAVALVDQMVE 179
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G KPDT+++N L+ + EA + + + GC P+ T+ T + LC G+ D
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239
Query: 326 AYKVFK---ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
A + K + + + +NT+ ++GL K K + +A + ++ K P+V
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTI---IDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 171/359 (47%), Gaps = 48/359 (13%)
Query: 54 HYASPVSSRYAQDLTVRRLAK--SKRFSDIETLIE--SHKNDPKITQEPYLCNLIRSYGQ 109
H+ P +AQ L ++ L+ S F + +L+ + +P +T ++I ++ +
Sbjct: 50 HHKLP----HAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLK 105
Query: 110 AGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI 169
+ + D A+ F++M + G FN+LL + RS ++K + F+E+ ++ D
Sbjct: 106 SQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKF--DVY 163
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
S+G+++K C++G+ DK+ +LL +++ G+ V YTT+++ K G+ E A + +M
Sbjct: 164 SFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKM 223
Query: 230 ------------------------EKKGVDL-----------DVAAYNVRITNTYGGDPE 254
+K G DL ++ YN + N Y G+ +
Sbjct: 224 GEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNC-LMNEYCGEGK 282
Query: 255 --RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
R +L DEMR+ G++ + ++YN L+ C+ E + EA+K+ + +++ SPN T+ T
Sbjct: 283 ICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNT 342
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I C GN DKA + + P T +L+EG K K + R ++ +
Sbjct: 343 LIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGR 401
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 38/311 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A FD+M E+G + +F L+ + L LF+++ K
Sbjct: 203 LIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKM-KIN 261
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y L+ +C G +A +L +EM +GVE VTY T++ + ++ EA
Sbjct: 262 GLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEA 321
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM-- 279
E+L +M+K V ++ YN I G+ ++ L+D+++ GL P ++YN L+
Sbjct: 322 EKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEG 381
Query: 280 ---------------------------TC------YCKNEMMDEAKKVYEGLEENGCSPN 306
TC Y + + M++A ++Y +E+ G P+
Sbjct: 382 YSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPD 441
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ I+ LC GN ++ K+F+ +H P ++ G K+ A ++R
Sbjct: 442 VYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLR 501
Query: 367 TIKKK-FPPNV 376
++ K PNV
Sbjct: 502 EMEAKGLVPNV 512
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 38/264 (14%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y C L+ Y G A FD+M E G +V+++N L+ R + L D++
Sbjct: 270 YNC-LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM 328
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
KK +SP+ I+Y L+ CD G+ DKA LL+++++ G+ + VTY ++ K GN
Sbjct: 329 -KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGN 387
Query: 219 -----------------------------------AEEAERLWSEMEKKGVDLDVAAYNV 243
E+A +++S MEK G+ DV Y V
Sbjct: 388 WKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGV 447
Query: 244 RITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I G+ + +L M + ++P + YN ++ YCK + A ++ +E G
Sbjct: 448 LIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKG 507
Query: 303 CSPNATTFRTWIYHLCGSGNFDKA 326
PN ++ + I LC G +++A
Sbjct: 508 LVPNVASYSSIIGVLCKDGKWEEA 531
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG + +M+ G S ++ L+ A R + +K ++ + +K+
Sbjct: 378 LIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM-EKF 436
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD YG+L+ C G+ ++ +L M VE + V Y T+++ K+ N+ A
Sbjct: 437 GLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRA 496
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
RL EME KG+ +VA+Y+ I G E + L+D+M + LKP N +
Sbjct: 497 LRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 132/263 (50%), Gaps = 8/263 (3%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACT-RSRLYDKVPILFDEIPKKYNLSPDKISY 171
F A M +LG + ++F+ LL + ++++ D V LFDE+ K PD I+Y
Sbjct: 28 FHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVK-LFDEMVK-MGYEPDVITY 85
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
++ C GS+ A++LL +ME KG + V Y+T+++ L K EA SEM
Sbjct: 86 STIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN 145
Query: 232 KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+G+ +V Y+ + G L +M + + PDT+++N L+ K M+ E
Sbjct: 146 RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILE 205
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLL 348
A+ V+E + E G PN T+ + C D+A K+F ++MV K P + +L
Sbjct: 206 AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF--NIMVRKGCAPSVRSYNIL 263
Query: 349 VEGLVKKKKIKEAKGVIRTIKKK 371
++G K +I EAKG++ + K
Sbjct: 264 IKGHCKSGRIDEAKGLLAEMSHK 286
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 140/278 (50%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G A++ +M+E G +V+ ++ ++ + + +L + E+ +
Sbjct: 88 IINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR- 146
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ ++Y +L C+ G S++A L +M + V TVT+ +++ L K+G EA
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLMT 280
+ ++ M +KGV+ +V YN + + Y + ++L + M G P SYN L+
Sbjct: 207 QCVFETMIEKGVEPNVNTYNA-LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK+ +DEAK + + +P+ T+ T + C G A K+ +E +P
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
D T ++++GL K+ + EA +++ +++ K PN+
Sbjct: 326 DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIF 363
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 9/268 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CNL RS + A F QM E ++FN L+ ++ + + +F+ +
Sbjct: 162 FCNLGRS-------NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMI 214
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+K + P+ +Y L+ +C D+A +L N M KG + +Y ++ K G
Sbjct: 215 EK-GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA+ L +EM K + D Y+ + G P+ ++L++EMR GL PD ++Y+ +
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +DEA ++ + ++E+ PN + I +C G + A ++F +
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T +++ GL+K EA + R
Sbjct: 394 QPDVVTYTVMISGLLKGGLSNEACELFR 421
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 131/257 (50%), Gaps = 6/257 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A++ FD+M ++G VI+++ ++ + L ++ +K P+ + Y ++
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEK-GCKPNVVVYSTII 124
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
S C +A+E L+EM N+G+ VTY+++L+ G + EA L+ +M ++ V
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D +N+ + + G + + + M + G++P+ +YN LM YC MDEA+K+
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGL 352
+ + GC+P+ ++ I C SG D+A + E M HK PD T L++G
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE--MSHKALTPDTVTYSTLMKGF 302
Query: 353 VKKKKIKEAKGVIRTIK 369
+ + ++A+ ++ ++
Sbjct: 303 CQDGRPQDAQKLLEEMR 319
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 2/247 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y D A + F+ M G SV S+N L+ +S D+ L E+ K
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++Y L+K C G A +LL EM + G+ +TY+ VL+ L KQG+ +EA
Sbjct: 288 -LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEA 346
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M++ ++ ++ Y + I G E +EL + G++PD ++Y +++
Sbjct: 347 FELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISG 406
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + +EA +++ + +GC PN+ T+ I +G+ A ++ +E V D
Sbjct: 407 LLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSAD 466
Query: 342 FNTVKLL 348
+T ++L
Sbjct: 467 SSTFQML 473
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDK--ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N+ PD + +L+ C S A +L M G++ VT++T+LN L +
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L+ EM K G + DV Y+ I G +L+ +M + G KP+ + Y+ ++
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK++++ EA + + G SPN T+ + ++ C G ++A +FK+ V + +
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNV 376
PD T +LV+GL K+ I EA+ V T I+K PNV
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 110/244 (45%), Gaps = 6/244 (2%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
S+ D+A +++ + + +P Y ++ ++ KS R + + L+ +
Sbjct: 234 SQSQMDEAQKLFNIMVRKGCAPSVRSY--NILIKGHCKSGRIDEAKGLLAEMSHKALTPD 291
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
L++ + Q G A + ++M G +++++ +L C + L + +L
Sbjct: 292 TVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELL- 350
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ ++ + P+ Y +L++ C+ G + A EL + + KG++ VTYT +++ L K
Sbjct: 351 -KAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLK 409
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTIS 274
G + EA L+ +M G + YNV I GD LI+EM G D+ +
Sbjct: 410 GGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSST 469
Query: 275 YNFL 278
+ L
Sbjct: 470 FQML 473
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 263 MRDAGLKPDTISYNFLMTCYC--KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
M + ++PD + L+ C+C ++ A V + + G PN TF T + L
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
A K+F E V + PD T ++ GL K A +++ +++K PNV+
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVV 118
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Q+G FD A++ FD+M + + ++F L+ C SR+ + + + D + K
Sbjct: 158 LIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML-KV 216
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + P Y L+K+ C G A +L +E ++V Y+T+++ L K G + E
Sbjct: 217 YGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNE 276
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ EM +KG D YNV I D E ++DEM + GLKPD ISYN ++
Sbjct: 277 VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILG 336
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + + +EA ++E + GCSP+ ++R LC F++A + E + P
Sbjct: 337 VFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ ++ ++ L + K++ VI ++ +
Sbjct: 397 RRDRLEGFLQKLCESGKLEILSKVISSLHR 426
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 162/351 (46%), Gaps = 15/351 (4%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS-RYA---QDLTVRRLAKSK 76
+ S+S + S LR E DP A+ ++ + +P RY+ D+ + +L SK
Sbjct: 2 SAVKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSK 61
Query: 77 RFSDIETLIESHKNDPKIT-QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
F +++ ++ K D +I E CN+I +G+ + A+ FD+M + R+V S
Sbjct: 62 MFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSL 121
Query: 136 NALLFACTRSRLYDKVPILF---DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
N+LL A + +K+ DE K PD +Y +L+ SG D AL+L +
Sbjct: 122 NSLLSALLKCGELEKMKERLSSIDEFGK-----PDACTYNILIHGCSQSGCFDDALKLFD 176
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK-KGVDLDVAAYNVRITNTYG- 250
EM K V+ T VT+ T+++ L K +EA ++ +M K GV V Y I
Sbjct: 177 EMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQI 236
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ +L DE + +K D Y+ L++ K +E + E + E GC P+ T+
Sbjct: 237 GELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTY 296
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
I C + + A +V E V PD + +++ + KK +EA
Sbjct: 297 NVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEA 347
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 145/315 (46%), Gaps = 42/315 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
LI S +AG + A R M G +V++++ L+ + D+ L E+ +K
Sbjct: 122 LIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKS 181
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNA 219
++ P+ I+Y L C + +A EL+ + + + V+ TVT++T+++ L K G
Sbjct: 182 CDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQT 241
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFL 278
+EA +M G +V YN + D ER +I+ M D G+ PD I+Y+ L
Sbjct: 242 DEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVL 299
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS------------------ 320
+ +CK +DEA ++ G+ GC+PN TF + I LC S
Sbjct: 300 VDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML 359
Query: 321 -----------------GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
GNF++A +F+E V + PD T L++GL K +++ A+
Sbjct: 360 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARD 419
Query: 364 VIRTIKK-KFPPNVL 377
++ + PPNV+
Sbjct: 420 ILDLMGNLGVPPNVV 434
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 139/305 (45%), Gaps = 39/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A D M G +V+++NAL+ ++ ++ + + + K
Sbjct: 231 LIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK- 287
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ------ 216
++PD I+Y +L+ + C + D+ALELL+ M ++G VT+ ++++ L K
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 347
Query: 217 -----------------------------GNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
GN E+A L+ EM K + DV + I
Sbjct: 348 FQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDG 407
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E ++++D M + G+ P+ ++YN L+ CK+ ++E + E + +GC P
Sbjct: 408 LCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ T+ + +Y LC + D A ++ + PD T +LV+GL K K ++A V+
Sbjct: 468 SMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 527
Query: 367 TIKKK 371
+ K
Sbjct: 528 EMVGK 532
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 8/256 (3%)
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ RSV +N +L + R+ + +F + ++P ++Y ++ C S
Sbjct: 41 SSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAG 100
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+EL E+ +G VTY T+++ L K G+ EEA RL M +G +V Y+V I
Sbjct: 101 MELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLING 160
Query: 248 TYG-GDPERLKELIDEM--RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG-- 302
G + +ELI EM + + P+ I+YN + CK M EA ++ L +
Sbjct: 161 LCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR 220
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
SP+ TF T I LC G D+A + + +P+ T LV GL K K++ A
Sbjct: 221 VSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAH 278
Query: 363 GVIRT-IKKKFPPNVL 377
+I + + K P+V+
Sbjct: 279 AMIESMVDKGVTPDVI 294
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 6/306 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K+ + +IES + L+ ++ +A D A+ M G
Sbjct: 265 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 324
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN--LSPDKISYGLLLKSHCDSGSSDK 186
+V++FN+++ +S D+ F + YN L PDK+++ +L+ C +G+ ++
Sbjct: 325 TPNVVTFNSIIDGLCKS---DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQ 381
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A L EM K ++ +T+ +++ L K G E A + M GV +V YNV +
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441
Query: 247 NTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E E ++EM +G P++++Y L+ C+ D+A ++ L+ G P
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDP 501
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ + L SG ++A V +E V PD T GL + + ++
Sbjct: 502 DTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELL 561
Query: 366 RTIKKK 371
R + K
Sbjct: 562 RVVLAK 567
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 9/252 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC RS G+A F A++ +++M P V +FN L+ ++ +++ LF+E+
Sbjct: 338 LCKSDRS-GEA--FQIALQVYNRML---VPDKV-TFNILIAGACKAGNFEQASALFEEMV 390
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K N+ PD +++G L+ C +G + A ++L+ M N GV VTY +++ L K G
Sbjct: 391 AK-NMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRI 449
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
EE EM G + Y + + +L+ +++ G PDT++YN L
Sbjct: 450 EEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNIL 509
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ K+ ++A V E + G P++ TF L SGN ++ + +
Sbjct: 510 VDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGM 569
Query: 339 IPDFNTVKLLVE 350
+PD T +++
Sbjct: 570 LPDATTCSSILD 581
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + A+R F++M + G SV+++N+L+ C+ ++ + V ++ E +
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM--EEMED 327
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP++I++G +LK C G A + ++ M + VE V Y +++ + G E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M KKG+ +V YN IT + GD L+DEM++ G++ D ++YN L+
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + +A K+ + + E G PN T+ T I C GN AY++ K
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ T + ++ + K+ EA ++ + K PN
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPN 543
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 138 LLFACTRS----RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
L+ A R+ R YD + + P+ P S LL + D A +
Sbjct: 125 LVLALARASQPLRAYDAFLLAGESHPRH---RPSTSSVNALLAGLVGAKRVDLAEKAFRS 181
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN----TY 249
+ V T+ TV++ L + G +A + +++ G+ VA YN I
Sbjct: 182 ALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG 241
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ + L+ EM +AG+ P +++ L+ YCKN A +V+E +++ G + + T
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI- 368
+ + I LC G ++ K+ +E + P+ T +++G KK + +A I +
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 369 KKKFPPNVL 377
++ P+V+
Sbjct: 362 ERNVEPDVV 370
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 158/342 (46%), Gaps = 11/342 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D +A + + K++ P Y V L K+ R D L++ + D + Y
Sbjct: 60 DFGQAFKFLAEMVKNHCLPTVVTYTN--IVDGLCKAGRTKDAVKLLDEMR-DKGCSPNIY 116
Query: 100 LCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N+I + D A + ++M G V+++N+ + + D+ +
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
P ++PD +SY ++ C SG D A +L++M N+G VTY+++++ K G
Sbjct: 177 P----VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
E A L M K G ++ AYN + + G + ++++ EM G PD +SYN
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+ CK E + +AK V++ + E GC+PNA+++ + LC D A + +++ +
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI--KKKFPPNVL 377
+I D +L++GL K + EA + + +K P+V
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 394
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 145/302 (48%), Gaps = 7/302 (2%)
Query: 73 AKSKRFSD-IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
+K+K F + L E KN T Y N++ +AG A++ D+M + G +
Sbjct: 56 SKAKDFGQAFKFLAEMVKNHCLPTVVTYT-NIVDGLCKAGRTKDAVKLLDEMRDKGCSPN 114
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+ ++N ++ R D+ + +E+ + PD ++Y +K C D+A + L
Sbjct: 115 IYTYNVIVEGLCEERKLDEAKKMLEEMAVR-GYFPDVVTYNSFIKGLCKCDRVDEARKFL 173
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
M V V+YTTV+N L K G+ + A R+ +M +G DV Y+ I G
Sbjct: 174 ARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKG 230
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ ER L+D M G +P+ ++YN L+ + + +A+ + +E G +P+ ++
Sbjct: 231 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 290
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I LC + KA VF V P+ ++ +LVE L KKK++ +A ++ ++
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQARE 350
Query: 371 KF 372
K+
Sbjct: 351 KY 352
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 142/319 (44%), Gaps = 36/319 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R ++ + A + +M E+G +NAL+ ++++ + + E+ K +
Sbjct: 16 LLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 75
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P ++Y ++ C +G + A++LL+EM +KG TY ++ L ++ +EA
Sbjct: 76 CL-PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEA 134
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN---------------------------------TY 249
+++ EM +G DV YN I
Sbjct: 135 KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCK 194
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
GD + ++D+M + G PD ++Y+ L+ +CK ++ A + + + + GC PN
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTI 368
+ + + L G+ KA + E PD + ++GL K +++K+AK V R +
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314
Query: 369 KKKFPPNVLRAWKKVEEEL 387
++ PN ++ + EEL
Sbjct: 315 ERGCTPNA-SSYSMLVEEL 332
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 114/242 (47%), Gaps = 11/242 (4%)
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
+F LL RS +K L + K+ PD Y L+ + + +A + L
Sbjct: 11 FTFAILLRGLCRSNQLEKARQLLGRM-KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLA 69
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD 252
EM T VTYT +++ L K G ++A +L EM KG ++ YNV + G
Sbjct: 70 EMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE---GLC 126
Query: 253 PER----LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
ER K++++EM G PD ++YN + CK + +DEA+K L +P+
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVV 183
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
++ T I LC SG+ D A ++ + PD T L++G K +++ A G++ ++
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243
Query: 369 KK 370
K
Sbjct: 244 LK 245
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 129/296 (43%), Gaps = 37/296 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + G + AM D M +LG +++++N+LL A R K + E+ ++
Sbjct: 222 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 281
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD +SY + C + KA + + M +G +Y+ ++ L K+ ++
Sbjct: 282 -GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDD 340
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL-KPDTISYNFLM 279
A L + +K +D+ Y V + GG + L ++ D + +PD YN ++
Sbjct: 341 AITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVML 400
Query: 280 TCYCKNEMMDEAKKVY-EGLEENGCS---------------------------------P 305
+CK +D+A +++ + LE N C+ P
Sbjct: 401 DSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP 460
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ T+ T + +C G A ++F+E+V +PD T L+ GLV + +EA
Sbjct: 461 DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA 516
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 12/330 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA ++ + + +P +S Y+ + V L K K D TL+E + +I
Sbjct: 305 KAKAVFDRMVERGCTPNASSYS--MLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362
Query: 103 LIRSYGQAGMFDHAMRTFDQ-MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ + G FD A F + +DE V +N +L + + R DK + ++ ++
Sbjct: 363 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER 422
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +++ +L+ C A +L M ++G VTY T+++ + K G +
Sbjct: 423 N--CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 480
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A L+ E K G DV Y+ IT + + +E K D +N ++
Sbjct: 481 ALELFEEAVKGGCVPDVVTYSALITGLVH------ENMAEEAYLLFTKLDVALWNAMILG 534
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY-HLCGSGNFDKAYKVFKESVMVHKIP 340
Y +N D K++ L E+ PNA TF I L + + KA +F +V P
Sbjct: 535 YAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFP 594
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D L++ K ++EA+ + ++K+
Sbjct: 595 DLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M D +PD ++ L+ C++ +++A+++ ++E GC P+ + I + +
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
F +A+K E V H +P T +V+GL K + K+A ++ ++ K PN+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNI 115
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 155/331 (46%), Gaps = 9/331 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL + + +P Y + ++ L KS R D ++ + D +
Sbjct: 253 EKALGLVQEMKDKGCAPTVFTYTE--LIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLIN 310
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI +G+AG + A++ FDQM L +V+++N ++ A S+ + E K
Sbjct: 311 NLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKA 370
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P +Y +L+ C + +KAL LL EM+ KG Y +++N L K E
Sbjct: 371 NGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 430
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ E+++ Y V I N G P +L +EM+ G PD +YN LM+
Sbjct: 431 ANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMS 490
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVMVH 337
+ M++EA +EENGC+P+ + + L +G ++A ++F K+S++
Sbjct: 491 GLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKP 550
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+NT+ + L + +EA ++R +
Sbjct: 551 DAVSYNTI---LGSLSRSGMFEEAAKLMREM 578
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 148/321 (46%), Gaps = 10/321 (3%)
Query: 63 YAQDLT-----VRRLAKSKRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHA 116
+ DLT +R L F ++ +I+ P P L +++ G+A M + A
Sbjct: 91 FEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKA 150
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
+ F Q+ + ++N+++ + ++K+ L+ E+ + + PD ++Y +L+
Sbjct: 151 LSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVS 210
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
+ G D A+ L +EM+ G+ T YTT+L +K G+ E+A L EM+ KG
Sbjct: 211 AFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAP 269
Query: 237 DVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
V Y I G E + M G KPD + N L+ + K +++A K++
Sbjct: 270 TVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLF 329
Query: 296 EGLEENGCSPNATTFRTWIYHLCGS-GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + C+PN T+ T I L S +A F++ P T +L++G K
Sbjct: 330 DQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCK 389
Query: 355 KKKIKEAKGVIRTIKKK-FPP 374
++++A ++ + +K FPP
Sbjct: 390 TNRVEKALLLLEEMDEKGFPP 410
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP--YLCN-LIRSYGQAGMFDHA 116
SS + ++ L K R S+ L K KI P Y N L+ +AGM + A
Sbjct: 445 SSARIYAVMIKNLGKCGRPSEAVDLFNEMK---KIGCNPDVYAYNALMSGLVRAGMIEEA 501
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
M+E G + S N +L R+ ++ +F ++ K + PD +SY +L
Sbjct: 502 FSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKM-KDSLIKPDAVSYNTILG 560
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
S SG ++A +L+ EM ++G E +TY+++L + K +E
Sbjct: 561 SLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605
>gi|359494844|ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Vitis vinifera]
Length = 336
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 168/383 (43%), Gaps = 62/383 (16%)
Query: 6 HIRRLCTATTAAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
H R ++ + S+T SS S+A S L+SE DP + L+I + + S + R A
Sbjct: 13 HRCRFFSSILSPDSATPLSSKEKSRAALSLLKSEQDPQRILEICRAAALTPESHLD-RVA 71
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
+ + +LA SK F I ++ K P + E ++ + I +GQAGM + A+RTF+QM
Sbjct: 72 FSVAISKLADSKHFDSIRHFLDELKARPDLRTERFVSHAIVLFGQAGMLNDAVRTFEQMH 131
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+LG R+V S NALLF+C ++ Y + +F E PK Y + + SY +LK+ +SGSS
Sbjct: 132 QLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIELNLDSYNTVLKAFSESGSS 191
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+L EM KGV+ ++ +L Y + E+ + ME+ + ++ YN+R
Sbjct: 192 SSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGXVLKMMEEYXMQPGISTYNIR 251
Query: 245 ITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ + L+D + + Y E G
Sbjct: 252 XQSLCKLKXSSERALLDGILARRMXXXXXXY------------------------EKGWX 287
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PN +T + LV GL K++EA+ +
Sbjct: 288 PNISTMTS-----------------------------------LVNGLXSISKVEEAREL 312
Query: 365 IRTIKKKFPPNVLRAWKKVEEEL 387
I IK+KF NV + W ++E L
Sbjct: 313 IGQIKEKFSRNVDK-WNEIEAGL 334
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 131/262 (50%), Gaps = 3/262 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI+ Y +HAM +M G P +S+ ++ F C R+ +V L +++ K
Sbjct: 247 LIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRI-KEVRNLMEKMVKD 305
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD+++Y L+ G +D+ALE L E E +G +V V Y+ ++N QG +
Sbjct: 306 NKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDR 365
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ + +EM KG DV Y + G E K+++ +M G KP+T+SY L+
Sbjct: 366 AKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLN 425
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C++ EA+++ EE+ +PNA T+ ++ L G +A V +E + P
Sbjct: 426 GLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFP 485
Query: 341 DFNTVKLLVEGLVKKKKIKEAK 362
+ LL++ L ++K+ EAK
Sbjct: 486 TPVEINLLIKSLCLEQKMNEAK 507
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L + KR ++ L+E D K+ + N L+ + G D A+ + +E G
Sbjct: 286 LCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQV 345
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ ++A++ + C + R+ D+ + +E+ K SPD ++Y ++ C G ++A +
Sbjct: 346 DKVGYSAIVNSFCMQGRM-DRAKEIVNEMITK-GCSPDVVTYTAVVNGLCKVGKVEEAKK 403
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+L +M G + TV+YT +LN L + GN+ EA + + E+ + Y+V +
Sbjct: 404 MLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLR 463
Query: 250 -GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G +++ EM G P + N L+ C + M+EAKK E GC+ NA
Sbjct: 464 REGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAV 523
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG-VIRT 367
F T I+ C S N D A + + + +K PD T +++ L KK +I+EA ++
Sbjct: 524 NFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKM 583
Query: 368 IKKKFPP 374
+KK P
Sbjct: 584 LKKGLDP 590
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 42/315 (13%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+++ SY +AG +AM+ M + G +++ N + + +K + F E +
Sbjct: 176 HVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKA-LRFLERMQL 234
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV---------------------E 200
++P+ ++Y L+K +CD + A+EL+ EM KG E
Sbjct: 235 VGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKE 294
Query: 201 VTT---------------VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
V VTY T+++ L K G+A+EA E E++G +D Y+ I
Sbjct: 295 VRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSA-I 353
Query: 246 TNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
N++ G +R KE+++EM G PD ++Y ++ CK ++EAKK+ + + ++GC
Sbjct: 354 VNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGC 413
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN ++ + LC GN +A ++ S P+ T +++ GL ++ K+ EA
Sbjct: 414 KPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACD 473
Query: 364 VIRTIKKK--FPPNV 376
V+R + K FP V
Sbjct: 474 VVREMLTKGFFPTPV 488
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 93/214 (43%), Gaps = 2/214 (0%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++ D I Y ++L+ + A +L M +G+ + V+ + G
Sbjct: 128 RQWRYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKL 187
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A ++ + M+K GV+ ++ N I E+ ++ M+ G+ P+ ++YN L
Sbjct: 188 RNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCL 247
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YC ++ A ++ + GC P+ ++ T + LC + + ++ V +K
Sbjct: 248 IKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNK 307
Query: 339 I-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ PD T LV L K EA +R +++
Sbjct: 308 LFPDQVTYNTLVHMLSKHGHADEALEFLRETEER 341
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ +++ ++ C S + D AL LL++M VT+T +++ L K+G EEA
Sbjct: 521 NAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYT 580
Query: 227 SEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
+M KKG+D Y I G E L +L+ +M K T +YN ++ C
Sbjct: 581 MKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS-KCRT-AYNQVIEKLCNF 638
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+ A KV + +A T + G AYKV + IPD
Sbjct: 639 GNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLC 698
Query: 346 KLLVEGLVKKKKIKEAKGVI 365
+ L + LV + K++EA ++
Sbjct: 699 EKLSKKLVLEGKLEEADNLM 718
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDE 262
+ Y +L L K + A R+ M ++G+ A+ +V ++ + G +++
Sbjct: 137 IVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTM 196
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M+ AG++P+ + N + +++A + E ++ G +PN T+ I C
Sbjct: 197 MQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQ 256
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI---KKKFPPNV 376
+ A ++ E PD + ++ L + K+IKE + ++ + K FP V
Sbjct: 257 VEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQV 313
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+S + A + ++ G + ++F ++ +S D L D++
Sbjct: 493 LIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLN- 551
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N PD +++ ++ + G ++A +M KG++ T VTY V++ K G EE
Sbjct: 552 NKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEEL 611
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M + AYN I G+PE +++ + + D + + LM
Sbjct: 612 IKLLGKMLSRSKCR--TAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMES 669
Query: 282 Y 282
Y
Sbjct: 670 Y 670
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + A+R F++M + G SV+++N+L+ C+ ++ + V ++ E +
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM--EEMED 327
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP++I++G +LK C G A + ++ M + VE V Y +++ + G E+
Sbjct: 328 LGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMED 387
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M KKG+ +V YN IT + GD L+DEM++ G++ D ++YN L+
Sbjct: 388 AMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIG 447
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + +A K+ + + E G PN T+ T I C GN AY++ K
Sbjct: 448 ALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRA 507
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ T + ++ + K+ EA ++ + K PN
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPN 543
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 138 LLFACTRS----RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
L+ A R+ R YD + + P+ P S LL + D A +
Sbjct: 125 LVLALARASQPLRAYDAFLLAGESHPRH---RPSTSSVNALLAGLVGAKRVDLAEKAFRS 181
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN----TY 249
+ V T+ TV++ L + G +A + +++ G+ VA YN I
Sbjct: 182 ALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGG 241
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ + L+ EM +AG+ P +++ L+ YCKN A +V+E +++ G + + T
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI- 368
+ + I LC G ++ K+ +E + P+ T +++G KK + +A I +
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 369 KKKFPPNVL 377
++ P+V+
Sbjct: 362 ERNVEPDVV 370
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 163/367 (44%), Gaps = 4/367 (1%)
Query: 10 LCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTV 69
+C T SS ++ K DK I++ + +P + + V
Sbjct: 319 MCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFT--ILV 376
Query: 70 RRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
L K+ R ++ L+++ + + LI +A D A+ F M+ LG
Sbjct: 377 NALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVE 436
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ ++ L+ +S K F+++ K ++P+ ++ L S + G +A
Sbjct: 437 PTAYTYILLIDYHGKSGHPGKALETFEKM-KARGIAPNIVACNASLYSLAEMGRLGEAKA 495
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+ NE+++ G+ +VTY ++ C K G +EA +L SEM K + DV N I Y
Sbjct: 496 MFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLY 555
Query: 250 -GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G E ++ M + L P ++YN L+ K + +A +++E + +GCSPN
Sbjct: 556 KAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTI 615
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
TF T + LC + D A K+F + ++ PD T ++ G +K+ +IK A + +
Sbjct: 616 TFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675
Query: 369 KKKFPPN 375
KK P+
Sbjct: 676 KKLLRPD 682
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
IR G+ G D A R +MD+ G V+++ L+ A +R D LF ++ K +
Sbjct: 271 IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM-KSSS 329
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
PDK++Y LL D G DK ++ EME G VT+T ++N L K G EA
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389
Query: 224 RLWSEMEKKGVDLDVAAYNVRITN---------------------------TY------- 249
L M K+GV ++ YN I+ TY
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYH 449
Query: 250 --GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G P + E ++M+ G+ P+ ++ N + + + EAK ++ L+ +G +P++
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ + G D+A K+ E V PD + L++ L K +++EA
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 126/266 (47%), Gaps = 2/266 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++G++G + +D+M G + I++N ++ +S DK L+ +
Sbjct: 830 SLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSG 889
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ SP ++G L+ SG D A E+ + M + G + Y ++N K G+ +
Sbjct: 890 -DFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDT 948
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M K+G+ D+ +Y + + G + ++++ AGL PD ++YN ++
Sbjct: 949 ACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMIN 1008
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+++ +EA ++ ++ G P+ T+ + I +L G ++A K+++E + P
Sbjct: 1009 GLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKP 1068
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ T L+ G + A G+ +
Sbjct: 1069 NVFTYNALIRGYTLSGNSELAYGIYK 1094
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 10/245 (4%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
IT + NL++S D AM + + + +F L+ +S D
Sbjct: 861 ITYNMVISNLVKS----NRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHE 916
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+FD + Y P+ Y +L+ + G D A E M +G+ +YT +++ L
Sbjct: 917 MFDGMVH-YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKP 270
G ++A + ++++ G+D D+ AYN+ I G +R +E L EM++ G+ P
Sbjct: 976 CIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGL--GRSQRTEEALSLFHEMQNRGIVP 1033
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D +YN L+ M++EA K+YE L+ G PN T+ I SGN + AY ++
Sbjct: 1034 DLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIY 1093
Query: 331 KESVM 335
K+ ++
Sbjct: 1094 KKMMV 1098
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 12/274 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ D+Y + P + Y ++ + L KS R ++ ++ + N P C
Sbjct: 842 NELFDLYDEMLTRGCKPNTITY--NMVISNLVKSNR---LDKAMDLYYNLVSGDFSPTPC 896
Query: 102 N---LIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDE 157
LI ++G D A FD M G P S I +N L+ + D F
Sbjct: 897 TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAI-YNILVNGYGKLGHVDTACEFFKR 955
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K+ + PD SY +L+ C +G D AL +++ G++ V Y ++N L +
Sbjct: 956 MVKE-GIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQ 1014
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYN 276
EEA L+ EM+ +G+ D+ YN I N G E ++ +E++ GLKP+ +YN
Sbjct: 1015 RTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYN 1074
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
L+ Y + + A +Y+ + GC PN TF
Sbjct: 1075 ALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + + A F++M G ++N+L+ A +S +++ L+DE+ +
Sbjct: 796 LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTR- 854
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ I+Y +++ + S DKA++L + + T T+ +++ L K G ++A
Sbjct: 855 GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA 914
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ M G + A YN+ + N YG G + E M G++PD SY L+
Sbjct: 915 HEMFDGMVHYGCRPNSAIYNI-LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVD 973
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C +D+A +E L++ G P+ + I L S ++A +F E +P
Sbjct: 974 ILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVP 1033
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
D T L+ L I+EA + ++ PNV
Sbjct: 1034 DLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVF 1071
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 130/302 (43%), Gaps = 35/302 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI---- 158
LI Q+G A+ + +M G S+ +F+AL+ A + R V L +E+
Sbjct: 200 LIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259
Query: 159 --PKKYNLS----------------------------PDKISYGLLLKSHCDSGSSDKAL 188
P Y + PD ++Y +L+ + C + D A+
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
L +M++ + VTY T+L+ G+ ++ E++W+EME G DV + + +
Sbjct: 320 CLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G +L+D MR G+ P+ +YN L++ + +D+A ++ +E G P A
Sbjct: 380 CKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTA 439
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I + SG+ KA + F++ P+ + L + ++ EAK +
Sbjct: 440 YTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNE 499
Query: 368 IK 369
+K
Sbjct: 500 LK 501
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 145/331 (43%), Gaps = 9/331 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE-SHKNDPK 93
L S DP AL + SV + + V + + + L +R D+ + + + +
Sbjct: 98 LHSISDPIHALFYFKSVGE-LPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIR 156
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+ YL + +S G A ++M E G + S+N L+ +S +
Sbjct: 157 RNVDTYLI-IFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALE 215
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
++ + + L P ++ L+ + + + LL EME+ G+ TYT + L
Sbjct: 216 VYRRMVSE-GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVL 274
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKP 270
+ G +EA R+ M+ G DV Y V I +L + L +M+ + KP
Sbjct: 275 GRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALC--TARKLDDAMCLFTKMKSSSHKP 332
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y L+ + +D+ +K++ +E +G +P+ TF + LC +G ++A+ +
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+P+ +T L+ GL++ ++ +A
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDA 423
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
SY L+ SG +ALE+ M ++G++ + T++ ++ K+ N + L EM
Sbjct: 196 SYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEM 255
Query: 230 EKKGVDLDVAAYNV--RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
E G+ ++ Y + R+ G E + ++ M D G PD ++Y L+ C
Sbjct: 256 ESMGLRPNIYTYTICIRVLGRDGKIDEAYR-IMKRMDDDGCGPDVVTYTVLIDALCTARK 314
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D+A ++ ++ + P+ T+ T + G+ DK K++ E PD T +
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKK 371
LV L K +I EA ++ T++K+
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQ 398
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 111/273 (40%), Gaps = 36/273 (13%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F + K+ + P Y LL+ + + + A L EM++ G T TY ++++
Sbjct: 776 VFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAH 835
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-------------------------- 247
K G E L+ EM +G + YN+ I+N
Sbjct: 836 GKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTP 895
Query: 248 -TYG---------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
T+G G + E+ D M G +P++ YN L+ Y K +D A + ++
Sbjct: 896 CTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKR 955
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ + G P+ ++ + LC +G D A F++ PD L++ GL + ++
Sbjct: 956 MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQR 1015
Query: 358 IKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLV 390
+EA + ++ + L + + LG+V
Sbjct: 1016 TEEALSLFHEMQNRGIVPDLYTYNSLILNLGIV 1048
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 113/286 (39%), Gaps = 40/286 (13%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A++ F +M + V++FN ++ + LF ++ K L PD ++
Sbjct: 631 DLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL--LRPDHVTLCT 688
Query: 174 LLKSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEA----ERLWSE 228
LL SG + A + + + G + + V+ + + E+A ERL
Sbjct: 689 LLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCR 748
Query: 229 --------------------------------MEKKGVDLDVAAYNVRITNTYG-GDPER 255
++ GV + YN+ I + E
Sbjct: 749 AICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEV 808
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L +EM+ AG PDT +YN L+ + K+ ++E +Y+ + GC PN T+ I
Sbjct: 809 AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+L S DKA ++ V P T L++GL+K ++ +A
Sbjct: 869 NLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDA 914
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 3/178 (1%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGG 251
M+ + + TY + L+ +G +A +M + G L+ +YN + G
Sbjct: 150 MQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGF 209
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E L E+ M GLKP +++ LM K + + E +E G PN T+
Sbjct: 210 CKEAL-EVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYT 268
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
I L G D+AY++ K PD T +L++ L +K+ +A + +K
Sbjct: 269 ICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMK 326
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 132/263 (50%), Gaps = 4/263 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +A A+ F++M E P ++N ++ ++RL K + E+
Sbjct: 13 IIDGFCKANQLKQALACFEKMREFVAPNER-TYNVVVNGLCKARLTSKAYEVLKEMRDGK 71
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEE 221
+++PD ++Y ++ C G D+A E+L EM + G+ VTYT+V++ L + G +
Sbjct: 72 SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDR 131
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLM 279
A + EM+ KGV+ D ++ IT E LK + + + KPD ++Y L+
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALI 191
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+CK+ +++A K+ +E C PN T+ + ++ LC +G+ D+A +F+ +
Sbjct: 192 DGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCV 251
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
P+ T L+ GL K+ A+
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAAR 274
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 7/272 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A +M G +F+AL+ +R D+ L+ EI + PD ++
Sbjct: 127 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVT 186
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ C SG+ +KA+++L ME + VTY+++L+ L K G+ ++A L+ M
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 231 KKGVDLDVAAYNVRITNTYGG---DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
KG +V Y I D RL L+DEM PDT+SYN L+ YC+
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARL--LMDEMTATCCPPDTVSYNALLDGYCRLGR 304
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVK 346
++EAK++++ + C P+ T+ + C + ++A + + I PD T
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364
Query: 347 LLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
++V G + K+ EA I+ I + PN +
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 396
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 8/281 (2%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
++E K P + +L+ +AG D A+ F +M G +V+++ L+
Sbjct: 209 VMEGRKCVPNVVTYS---SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLC 265
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+ D +L DE+ PD +SY LL +C G ++A +L EM K
Sbjct: 266 AAHKVDAARLLMDEMTATC-CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDR 324
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEME-KKGVDLDVAAYNVRITN-TYGGDPERLKELID 261
+TYT ++ EEA L M+ G+D DV Y++ + + E I
Sbjct: 325 ITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQ 384
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
EM + P+ ++Y+ L+ CK +D A +V + + P+ TF + I LC G
Sbjct: 385 EMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLG 444
Query: 322 NFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEA 361
+ D+A+K+ ++ H + P T L+EG + +++ A
Sbjct: 445 DMDEAWKLLV-AMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 484
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 122/260 (46%), Gaps = 6/260 (2%)
Query: 118 RTFDQMDELGTPRSV----ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ ++ + E+ +SV ++++ ++ + D+ + E+ + ++PD ++Y
Sbjct: 59 KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE-MEKK 232
++ C G D+A E++ EM+ KGVE T++ ++ +EA +L+ E +
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
DV Y I G+ E+ +++ M P+ ++Y+ L+ CK +D+A
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 238
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++ + GC PN T+ T I+ LC + D A + E PD + L++G
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDG 298
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
+ +I+EAK + + + K
Sbjct: 299 YCRLGRIEEAKQLFKEMATK 318
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 13/242 (5%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMD-ELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
Y C L+R + A + A + M G V++++ ++ +R++ + + E
Sbjct: 327 YTC-LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 385
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + N++P+ ++Y L+ C +G D A+E+L M NK VE + T+ +V+ L + G
Sbjct: 386 MIAR-NVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLG 444
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMR--------DAGL 268
+ +EA +L M G++ + Y + + G E EL + MR A L
Sbjct: 445 DMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANL 504
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ +++ L+ CK +D+A V E L C P + L +G ++A K
Sbjct: 505 VPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGK 563
Query: 329 VF 330
+
Sbjct: 564 LI 565
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 8/272 (2%)
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
E L++ + + G + A+R +M E+G + ++ N L+ C R+ D + +
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
EI + PD+I+Y + C + AL++++ M +G + TY V+NCL K
Sbjct: 184 QEIADGF--EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 241
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA---GLKPDT 272
G EEA+ + ++M +G D+ +N I G+ RL+E +D R G+ PD
Sbjct: 242 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN--RLEEALDLARQVTVKGVSPDV 299
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++N L+ CK A +++E ++ +GC+P+ T+ T I +LC G KA + K+
Sbjct: 300 YTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKD 359
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
T +++GL KK +I+EA+ V
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEV 391
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 43/329 (13%)
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTR 144
E H DP + + N + GQ + A +QM + G + +FN L+ A CT
Sbjct: 223 EGH--DPDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 277
Query: 145 SRLYDKVPI----------------------------------LFDEIPKKYNLSPDKIS 170
+RL + + + LF+E+ K +PD+++
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVT 336
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ + C G KAL+LL +ME+ G +T+TY T+++ L K+ EEAE ++ +M+
Sbjct: 337 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 396
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+G+ + +N I + ELI++M GL+P+ I+YN ++T YCK +
Sbjct: 397 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 456
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A + E + NG + T+ T I LC +G A KV + + P ++
Sbjct: 457 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 516
Query: 350 EGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+ L ++ I++A + R + + PP+ L
Sbjct: 517 QSLFRRNNIRDALSLFREMAEVGEPPDAL 545
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 5/314 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALD+ V+ SP Y ++ + L K L E KN E
Sbjct: 281 EEALDLARQVTVKGVSP--DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 338
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G A+ M+ G PRS I++N ++ + ++ +FD++ +
Sbjct: 339 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 398
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + I++ L+ C D A EL+N+M ++G++ +TY ++L KQG+ ++
Sbjct: 399 -GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 457
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M G ++DV Y I G + +++ MR G++P +YN ++
Sbjct: 458 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 517
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKI 339
+ + +A ++ + E G P+A T++ LC G G +A+ E V I
Sbjct: 518 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 577
Query: 340 PDFNTVKLLVEGLV 353
P+F++ ++L EGL+
Sbjct: 578 PEFSSFRMLAEGLL 591
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+ +M G V++FN L+ A R+ ++ +E+ + ++PD+ ++ L++
Sbjct: 76 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGF 134
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
+ GS + AL + M G T VT ++N K G E+A + G + D
Sbjct: 135 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 194
Query: 239 AAYNVRITNTYGGD--PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
YN + D LK ++D M G PD +YN ++ C CKN ++EAK +
Sbjct: 195 ITYNTFVNGLCQNDHVGHALK-VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 253
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + GC P+ TTF T I LC ++A + ++ + PD T +L+ L K
Sbjct: 254 QMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCK 311
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 132/281 (46%), Gaps = 9/281 (3%)
Query: 102 NLIRSYGQAGMFDHAMR-TFDQMDEL-GTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+ + SY +FD A+ +Q+ L G + +N LL + ++ E+
Sbjct: 22 SFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMG 81
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + PD +++ L+K+ C + A+ +L EM ++GV T+TT++ ++G+
Sbjct: 82 AR-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSI 140
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYN 276
E A R+ + M + G NV I N Y G + L + E+ D G +PD I+YN
Sbjct: 141 EAALRVKARMLEMGCSATKVTVNVLI-NGYCKLGRVEDALGYIQQEIAD-GFEPDQITYN 198
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+ C+N+ + A KV + + + G P+ T+ + LC +G ++A + + V
Sbjct: 199 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 258
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
+PD T L+ L +++EA + R + K P+V
Sbjct: 259 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDV 299
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
++ K+++ + I +IE P + L I G + A + M G
Sbjct: 131 KIGKTRKATRIMEIIEDSGAVPDVITYNVL---ISGMCSTGRWMDAEKLLADMVRRGCSP 187
Query: 131 SVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
SV++FN L+ F C + L + +L +++PK + +P+ +SY LL C ++A+E
Sbjct: 188 SVVTFNILINFLCRKGLLGRAIDVL-EKMPK-HGCTPNSLSYNPLLHGFCKEKKMERAIE 245
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
L +M ++G VTY T+L L K G + A L +++ KG + YN I +
Sbjct: 246 YLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLS 305
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G ++ +L+DEMR GLKPD I+Y+ L+ + +DEA K + LE G PNA
Sbjct: 306 KVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAI 365
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ + LC + D+A V P + +L+EGL + KEA
Sbjct: 366 TYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEA 418
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 2/231 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G+ A+ ++M + G + +S+N LL + + ++ ++ +
Sbjct: 195 LINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR- 253
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y LL + C G D A+ELLN++ +KG +TY TV++ L K G ++A
Sbjct: 254 GCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 313
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L EM KG+ D+ Y+ + + G + + ++ G+KP+ I+YN +M
Sbjct: 314 AKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLG 373
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK D A + + GC P ++ I L G +A ++ E
Sbjct: 374 LCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNE 424
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 8/279 (2%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CT 143
I S N +I L L+R+ G + R + M G +I +L+ C
Sbjct: 76 IHSLTNFEEIESNNNLSKLVRN----GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCK 131
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+ I+ EI + PD I+Y +L+ C +G A +LL +M +G +
Sbjct: 132 IGKTRKATRIM--EIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSV 189
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDE 262
VT+ ++N L ++G A + +M K G + +YN + ER E + +
Sbjct: 190 VTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGK 249
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M G PD ++YN L+T CK+ +D A ++ L GCSP T+ T I L G
Sbjct: 250 MTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 309
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
D+A K+ E PD T LV GL ++ K+ EA
Sbjct: 310 TDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEA 348
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 2/214 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD I L++ C G + KA ++ +E+ G +TY +++ + G +AE+L
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
++M ++G V +N+ I G R +++++M G P+++SYN L+ +CK
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ M+ A + + GC P+ T+ T + LC G D A ++ + P T
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+++GL K K +A ++ ++ K P+++
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 12/234 (5%)
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+EI NLS L+++ G ++ L M +G + T+++
Sbjct: 82 FEEIESNNNLSK-------LVRN----GELEEGFRFLESMVYRGDIPDIIPCTSLIRGFC 130
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTI 273
K G +A R+ +E G DV YNV I+ G ++L+ +M G P +
Sbjct: 131 KIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVV 190
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
++N L+ C+ ++ A V E + ++GC+PN+ ++ ++ C ++A + +
Sbjct: 191 TFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKM 250
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
PD T L+ L K K+ A ++ + K VL + V + L
Sbjct: 251 TSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A + D+M G +I++++L+ +R D+ F ++ +
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDL-EVL 358
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ I+Y ++ C + +D+A++ L M +G + T +YT ++ L +G A+EA
Sbjct: 359 GVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEA 418
Query: 223 ERLWSEMEKKGV 234
L +E+ +GV
Sbjct: 419 LELLNELCLRGV 430
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 147/318 (46%), Gaps = 3/318 (0%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
R+ ++T+ L KS E+ + K+ + LI ++ + D A++ F
Sbjct: 66 RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M G S ++N L+ R + ++ + I+Y +L+ C +
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSS-GAGASFITYNILVDGFCKA 184
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+A+ELLNE+ +G VT+ Y +++ L+K+G EAE ++ MEK GV +
Sbjct: 185 DRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTF 244
Query: 242 NVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
V I + R KE+ ++G P + + LM +CK +DEA +++E +
Sbjct: 245 TVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTN 304
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
GC+PN + I LC + +A +VF+E V PD T ++GL + ++ +
Sbjct: 305 RGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQ 364
Query: 361 AKGVI-RTIKKKFPPNVL 377
A+ V+ + K P+V+
Sbjct: 365 ARQVLCMLVDKGGTPDVV 382
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 159/340 (46%), Gaps = 12/340 (3%)
Query: 42 DKALDIYSS-VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
D+AL+++ S VS P DL VR L+K+ R + +++ + ++ +E +L
Sbjct: 16 DEALELFHSLVSDGCGLPA------DLLVRELSKAGRAEECLKVVKLMLDRQQL-RERHL 68
Query: 101 CNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
N+ I S ++ M D A F ++ + + +S+N L+ A +++ D+ LF E+
Sbjct: 69 VNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEM- 127
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +P +Y L+ C +A + + + G + +TY +++ K
Sbjct: 128 KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRV 187
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
EA L +E+ +G + A YN I + G + + M G++P +++ L
Sbjct: 188 PEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVL 247
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + AK+++ E+G SP+ + C G D+A+++F+
Sbjct: 248 IDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGC 307
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
P+ + +L+ GL K K++ +A+ V +K++ P+V+
Sbjct: 308 TPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVV 347
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 152/343 (44%), Gaps = 18/343 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLT----VRRLAKSKRFSDIETLIESHKNDPKITQE 97
D+A+ ++ + +P +S Y + V RL ++++F E L+ S IT
Sbjct: 118 DEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQF--YERLLSSGAGASFITYN 175
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
L+ + +A A+ +++ G + +N ++ + + + F+
Sbjct: 176 I----LVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNR 231
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K + P ++++ +L+ C + +A E+ G + V + +++ K G
Sbjct: 232 MEKD-GVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYG 290
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTIS 274
+EA R++ M +G + + N+ I +RL +E+ +E+ KPD ++
Sbjct: 291 GVDEAWRIFELMTNRGCTPNDVSCNILINGLC--KAKRLSQAREVFEEVVKRQAKPDVVT 348
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y+ M C+ +D+A++V L + G +P+ + I LC G D+A KVF+ +
Sbjct: 349 YSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDM 408
Query: 335 MVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
P+ T +LV G ++ EA+ + R +++ P+
Sbjct: 409 RAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPD 451
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 7/293 (2%)
Query: 66 DLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
++ V K+ R + +E L E +T PY C +I + + G A F++M+
Sbjct: 175 NILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNC-IIDTLFKKGKIHEAELFFNRME 233
Query: 125 ELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+ G ++F L+ C +R+ I F + SP + L+ C G
Sbjct: 234 KDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGG--SPSVVICSCLMDGFCKYGG 291
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
D+A + M N+G V+ ++N L K +A ++ E+ K+ DV Y+
Sbjct: 292 VDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYST 351
Query: 244 RITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE-GLEEN 301
+ ++ ++++ + D G PD + Y L++ C +DEA+KV+E +
Sbjct: 352 FMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAA 411
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
GC+PN T + +G D+A ++F+ V PD T + K
Sbjct: 412 GCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAK 464
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G D+ALEL + + + G + ++ L K G AEE ++ M + +
Sbjct: 10 CHVGKLDEALELFHSLVSDGCGLPA---DLLVRELSKAGRAEECLKVVKLMLDRQQLRER 66
Query: 239 AAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
N+ I + D ++ + E++D +T+SYN L+ +CK + +DEA +++
Sbjct: 67 HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
++ GC+P+ +T+ T I LC +A + ++ + F T +LV+G K +
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186
Query: 358 IKEA 361
+ EA
Sbjct: 187 VPEA 190
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 162/333 (48%), Gaps = 10/333 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP--YL 100
K +D + + KH + P + Y ++ L K+ ++ +E K EP L
Sbjct: 32 KVMDEFQELDKHGSKP--NAYTYKCVIQSLVKA---GNVVLAMELLDKMIKTGLEPDTLL 86
Query: 101 CNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CN++ G+A M D A + F M +G P ++ L+ + R + ++ +LFDE+
Sbjct: 87 CNVVLDGLGKANMMDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEME 146
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ +P +Y ++ +C +G + A+ +L +M +K + T +++ + + G
Sbjct: 147 ER-GCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRT 205
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E A ++ M+K GV ++ ++N + G + +DEM G+KP++I++N L
Sbjct: 206 ELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTL 265
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C + + EA KV + + G +P+ T+ I +GN KA+++F +
Sbjct: 266 INCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGC 325
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ T LL++ LVK + ++A+ + +KKK
Sbjct: 326 SANVVTYNLLIDALVKAGRYQDARDIYFDMKKK 358
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
G+AG A + D+M+ G + I+FN L+ R++ + + E+ + L+PD
Sbjct: 235 GKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEM-RSAGLTPD 293
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y ++++ +G+ KA E+ +ME G VTY +++ L K G ++A ++
Sbjct: 294 VFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYF 353
Query: 228 EMEKKGV 234
+M+KKG+
Sbjct: 354 DMKKKGI 360
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 3/248 (1%)
Query: 117 MRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
M +F D M E G FN A + + DK +F+++ +++ LSP+ ++YG L+
Sbjct: 293 MHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALI 351
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G D A N+M N+GV V + +++ L E AE L EM +G+
Sbjct: 352 DALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC 411
Query: 236 LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ +N I N G + LID M G++PD SY L++ YC DEA+KV
Sbjct: 412 PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKV 471
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++G+ G SP T+ T ++ C + D AY +F+E + P T ++ GL +
Sbjct: 472 FDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 531
Query: 355 KKKIKEAK 362
K+ EAK
Sbjct: 532 TKRFSEAK 539
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 139/366 (37%), Gaps = 39/366 (10%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND---PKIT--- 95
DKA+DI++ + +H SP Y + L K R D E N+ P I
Sbjct: 326 DKAMDIFNKMRQHGLSPNVVNYGA--LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383
Query: 96 -----------------------------QEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ LI + G R D M+ +
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHV 443
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G S+ L+ + D+ +FD + LSP +++Y LL +C + D
Sbjct: 444 GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS-IGLSPTEVTYNTLLHGYCSASRIDD 502
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A L EM KGV VTY T+L+ L++ EA+ L+ M G D+ YN+ +
Sbjct: 503 AYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILN 562
Query: 247 NTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ + ++ + GL+ + I++ ++ K ++A ++ + NG P
Sbjct: 563 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 622
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+R +L G+ ++ +F P+ + LV L+ + I A +
Sbjct: 623 NVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL 682
Query: 366 RTIKKK 371
+ ++
Sbjct: 683 SKLDER 688
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD--PERL 256
V T TY+ ++ CL + G + + + + K G ++ N + G E +
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN---GCSPNATTFRTW 313
L+ M + G PDT+SY+ L+ +C +EA ++ + + C PN T+ T
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I LC + FD+A VF++ + P+ +T L+ G + K KE V++ ++K
Sbjct: 214 IDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKE---VVQMLEK 267
>gi|210077733|gb|ACJ07055.1| putative membrane-associated salt-inducible protein [Triticum
monococcum]
Length = 277
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+GQAG+ A+ TF +P S S NALLFAC + + + +F P + + P
Sbjct: 45 FGQAGLLPDAITTFQS-----SP-STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKP 98
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ ++KS +SG++ + +EM +GV+ T T+T + YK+ ++ E++
Sbjct: 99 NAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVI 158
Query: 227 SEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
M+K G + YN R+ G K L+ EM G KP+ ++YN L+ +CK
Sbjct: 159 KLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKE 218
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++EAK++Y+ + + G ++ + T I+HLC SG+FD A V+ E + + +P F+T
Sbjct: 219 GDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKSGDFDTALGVYNEIIPRNWVPCFST 277
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 217 GNAEEAERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
GN EA R++ + V + +N I + + G + DEM G+KP +
Sbjct: 78 GNHAEAARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATT 137
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ + + K E D+ +KV + ++++GC + + + LC G A + E
Sbjct: 138 FTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMA 197
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P++ T L+ G K+ ++EAK + + + KK
Sbjct: 198 KKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGKK 234
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 151/313 (48%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++ +AG D A R M + G ++++FN+++ ++ + +FDE+ ++
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMRE- 249
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD +SY L+ +C +G S +AL + EM KG+ VT+T++++ + K GN E A
Sbjct: 250 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWA 309
Query: 223 ERLWSEMEKKGVDLD-----------------------------------VAAYNVRITN 247
L +M ++G+ ++ V YN I N
Sbjct: 310 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALI-N 368
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
Y G + +EL+ EM GLKPD ++Y+ +++ YCKN A ++ + + E G P
Sbjct: 369 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 428
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A T+ + I LC A+ +FK + + PD T L++G K+ ++ A +
Sbjct: 429 DAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLH 488
Query: 366 -RTIKKKFPPNVL 377
+ +K P+V+
Sbjct: 489 DKMVKAGVLPDVV 501
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 127/251 (50%), Gaps = 8/251 (3%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
SV+++NA+L A + + L FD + ++P+ +Y +L+++ C G +AL +
Sbjct: 115 SVLAYNAVLLALSDASL-TSARRFFDSMLSD-GVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
L +M G VTY T++ ++ G + AERL M G+ ++ +N +
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G E +++ DEM GL PD +SYN L+ YCK EA V+ + + G P+ T
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL--LVEGLVKKKKIKEAKGVIRT 367
F + I+ +C +GN + A + ++ M + N V L++G KK + +A +R
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQ--MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350
Query: 368 IKK-KFPPNVL 377
+++ + P+V+
Sbjct: 351 MRQCRIKPSVV 361
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 4/273 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y +AG A+ F +M + G V++F +L+ ++ + L ++ ++
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM-RER 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L +++++ L+ C G D AL + M ++ + V Y ++N G +EA
Sbjct: 320 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEA 379
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EME KG+ DV Y+ I + Y D EL +M + G+ PD I+Y+ L+
Sbjct: 380 RELLHEMEAKGLKPDVVTYST-IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 438
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ + + +A +++ + + G P+ T+ + I C GN ++A + + V +P
Sbjct: 439 VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP 498
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
D T +L+ GL K + EA+ ++ + + P
Sbjct: 499 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 154/378 (40%), Gaps = 56/378 (14%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+AL +++ +++ P + + V + K+ TL+ + E
Sbjct: 273 EALSVFAEMTQKGIMPDVVTFTSLIHV--MCKAGNLEWAVTLVRQMRERGLQMNEVTFTA 330
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + G D A+ M + SV+ +NAL+ C R+ D+ L E+ K
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM-DEARELLHEMEAK 389
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD ++Y ++ ++C + + A EL +M KGV +TY++++ L ++ +
Sbjct: 390 -GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD 448
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL-- 278
A L+ M K G+ D Y I + G+ ER L D+M AG+ PD ++Y+ L
Sbjct: 449 AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLIN 508
Query: 279 ---------------------------------MTC---------------YCKNEMMDE 290
M C +C +M+E
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNE 568
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A KVY+ + + + + + + I+ C +GN KA K+ + P+ + L+
Sbjct: 569 ADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIR 628
Query: 351 GLVKKKKIKEAKGVIRTI 368
GL + + EA VI+ +
Sbjct: 629 GLFENGMVVEADQVIQQL 646
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 5/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A R FD M G +V ++N L+ A C R + + IL D + P+ ++Y L
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDM--RGAGCGPNVVTYNTL 191
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ + +G D A L+ M + G++ VT+ +++N + K G E+A +++ EM ++G+
Sbjct: 192 VAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGL 251
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D +YN + G + EM G+ PD +++ L+ CK ++ A
Sbjct: 252 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVT 311
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + E G N TF I C G D A + P L+ G
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNVL 377
++ EA+ ++ ++ K P+V+
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVV 396
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 180/379 (47%), Gaps = 44/379 (11%)
Query: 32 KSKLRSEFDPDKALDIYSSVSKH-YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN 90
++ LRS + +KA ++Y + + Y + +A ++ + LAK + + + + K
Sbjct: 233 QAHLRSN-NSNKAFEVYVELRRRGYKLDI---FAYNMLLDALAKDNKVDQVYMVFKDMKR 288
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
E +IR G+ G D ++ F +M E G ++I++N ++ A +R+ DK
Sbjct: 289 KHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDK 348
Query: 151 VPILFD----EIPKKY-----------NLSP---------------------DKISYGLL 174
LF E+ K+ LS D+ +Y +
Sbjct: 349 TIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSM 408
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L+S CD+G + +AL+LL+++ K + TV Y TVL+ L K + L+ +M++ G
Sbjct: 409 LESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGP 468
Query: 235 DLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
D+ +YN+ I+ ++G G E ++ +E+ ++ KPD IS+N L+ C KN +DEA
Sbjct: 469 SPDIFSYNILIS-SFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAH 527
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ + E G SP+ T+ T I + + A ++F E + P+ T +L++ L
Sbjct: 528 MRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCL 587
Query: 353 VKKKKIKEAKGVIRTIKKK 371
+ + EA + +K++
Sbjct: 588 ERSGRTAEAVDLYAKLKQQ 606
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERL 256
+++ TY +L + N+ +A ++ E+ ++G LD+ AYN+ + + D +++
Sbjct: 221 LQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNM-LLDALAKDNKVDQV 279
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+ +M+ +PD +Y ++ K DE+ +++ + E G +PN + T I
Sbjct: 280 YMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQA 339
Query: 317 LCGSGNFDKAYKVFKESVM 335
L + DK +F + V+
Sbjct: 340 LANNRMVDKTIFLFSKMVV 358
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 203 TVTYTTVLNCLYKQGNAEEAERL------WSEMEKKGVDLDVAAYNVRITNTYGG-DPER 255
+ TY +L L K ++ERL +ME+ GV ++ N+ I GG D ER
Sbjct: 152 SFTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILIGIFGGGADVER 211
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+L+ + L+ + +Y L+ + ++ ++A +VY L G + + +
Sbjct: 212 CFDLV---KKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLD 268
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
L D+ Y VFK+ H PD T +++ K K E+ + + + +K + P
Sbjct: 269 ALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTP 328
Query: 375 NVL 377
N++
Sbjct: 329 NLI 331
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
++RS G + A + M G SV++FN L+ F C + L + IL +++P+
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL-EKMPQ- 372
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +SY LL C D+A+E L M ++G VTY T+L L K G E+
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +++ KG + YN I G + +L+DEMR LKPDTI+Y+ L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +DEA K + E G PNA TF + + LC S D+A + P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ + +L+EGL + KEA
Sbjct: 553 NETSYTILIEGLAYEGMAKEA 573
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++RS +G AM D+M + VI++ L+ A R L DE+ +
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDR 268
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y +L+ C G D+A++ LN+M + G + +T+ +L + G +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L ++M +KG V +N+ I G R +++++M G +P+++SYN L+
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK + MD A + E + GC P+ T+ T + LC G + A ++ + P
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T +++GL K K +A ++ ++ K
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 159/332 (47%), Gaps = 12/332 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
RL K+++ + I ++E P + + I Y +AG ++A+ D+M
Sbjct: 149 RLGKTRKAAKILEILEGSGAVPDVITYNVM---ISGYCKAGEINNALSVLDRMS---VSP 202
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V+++N +L + C +L + +L D + ++ + PD I+Y +L+++ C A++
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVL-DRMLQR-DCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL+EM ++G VTY ++N + K+G +EA + ++M G +V +N+ + +
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 250 G-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G ++L+ +M G P +++N L+ C+ ++ A + E + ++GC PN+
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
++ ++ C D+A + + V PD T ++ L K K+++A ++ +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 369 KKKFPPNVLRAWKKVEEELGLVPAPAVGDGQK 400
K VL + V + GL A G K
Sbjct: 441 SSKGCSPVLITYNTVID--GLAKAGKTGKAIK 470
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 10/280 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
N +R + G + + + M G +I L+ C + IL EI +
Sbjct: 107 NHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL--EILE 164
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD I+Y +++ +C +G + AL +L+ M V VTY T+L L G +
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A + M ++ DV Y + I T G +K L+DEMRD G PD ++YN L
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK-LLDEMRDRGCTPDVVTYNVL 280
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +DEA K + +GC PN T + +C +G + A K+ + +
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
P T +L+ L +K + A ++ + + PN L
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + D A+ ++M G ++++N +L A C ++ D V IL +++ K
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL-NQLSSK 443
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP I+Y ++ +G + KA++LL+EM K ++ T+TY++++ L ++G +E
Sbjct: 444 -GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + + E E+ G+ + +N + + +R + + M + G KP+ SY L+
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 281 CYCKNEMMDEAKKVYEGLEENG 302
M EA ++ L G
Sbjct: 563 GLAYEGMAKEALELLNELCNKG 584
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS-KRFSDIETLIESHKNDPKITQEPYL 100
+ A++I + +S SPV Y + + LAK+ K I+ L E D K Y
Sbjct: 431 EDAVEILNQLSSKGCSPVLITY--NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY- 487
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+L+ + G D A++ F + + +G + ++FN+++ +SR D+ I F
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA-IDFLVFMI 546
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
P++ SY +L++ G + +ALELLNE+ NKG+
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 1/132 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +AG A++ D+M I++++L+ +R D+ F E ++
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF-ERM 513
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +++ ++ C S +D+A++ L M N+G + +YT ++ L +G A+EA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 223 ERLWSEMEKKGV 234
L +E+ KG+
Sbjct: 574 LELLNELCNKGL 585
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI G A+ D+M E+G ++I+ NAL+ C ++ D V +L D + +
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV-LLIDRMVET 206
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P++++YG +LK C SG + A+ELL +ME + +++ V Y+ +++ L K G+ +
Sbjct: 207 -GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGG-------------------DPERLKELID 261
A L++EME KG D+ Y I Y G D LID
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 262 ----------------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
EM G+ PDT++Y L+ +CK +D+A + + + GC P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N TF I C + D ++F++ + + D T L++G + K++ AK +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 366 R-TIKKKFPPNVL 377
+ + ++ P+++
Sbjct: 446 QEMVSRRVRPDIV 458
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR + AG +D + M + V++F+AL+ + + L E+ ++
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR- 346
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD ++Y L+ C DKA +L+ M +KG T+ ++N K ++
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M +GV D YN I G E KEL EM ++PD +SY L+
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N ++A +++E +E++ + + I+ +C + D A+ +F + PD
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +++ GL KK + EA + R +++
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + D A D M G ++ +FN L+ ++ L D LF ++ +
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D ++Y L++ C+ G + A EL EM ++ V V+Y +L+ L G E+
Sbjct: 417 -GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ ++EK ++LD+ YN+ I + +L + G+KPD +YN ++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK + EA ++ +EE+G SPN T+ I G G+ K+ K+ +E
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 123/269 (45%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A +M + G +++ +L+ + DK + D + K
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK- 381
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ +L+ +C + D LEL +M +GV TVTY T++ + G E A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ EM + V D+ +Y + + G+PE+ E+ +++ + ++ D YN ++
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +D+A ++ L G P+ T+ I LC G+ +A +F++ P+
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +L+ + + ++ +I IK+
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 154/363 (42%), Gaps = 14/363 (3%)
Query: 24 SSISVSKAK----SKLRS---EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
SS+S K K +LRS + D A+D++ +++ P +++ +V +A++K
Sbjct: 29 SSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSV--VARTK 86
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
++ + L + + L +I + A ++ +LG ++F+
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 137 ALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
L+ C R+ + + ++ + + P I+ L+ C +G A+ L++ M
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGH--KPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPE 254
G + VTY VL + K G A L +ME++ + LD Y++ I G +
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
L +EM G K D I Y L+ +C D+ K+ + + +P+ F I
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFP 373
G +A ++ KE + PD T L++G K+ ++ +A ++ + K
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 374 PNV 376
PN+
Sbjct: 385 PNI 387
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 26/230 (11%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A+ F+++++ + +N ++ + D LF +P K + PD +Y +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNI 532
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ C GS +A L +ME G TY ++ +G+A ++ +L E+++ G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 234 VDLDVAAYNVRITNTY-----GGDPER-----------LKE---------LIDEMRDAGL 268
+D + ++ G +P+ L+E L M+ G
Sbjct: 593 FSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGY 652
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
KP+ ++YN ++ M+ + V + + E GC PNA T T+I LC
Sbjct: 653 KPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 156/328 (47%), Gaps = 9/328 (2%)
Query: 42 DKALDIYSSV-SKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP--KITQEP 98
D+AL+ Y+ V + + + + +L ++ + K ++ IE + P K +
Sbjct: 160 DRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK---LGLVDNAIELFREMPVRKCVPDA 216
Query: 99 Y-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
Y C L+ + D A+ D+M G S +FN L+ + + +V L D
Sbjct: 217 YTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDN 276
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K P++++Y L+ C G DKAL LL+ M + VTY T++N L KQG
Sbjct: 277 MFLK-GCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQG 335
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYN 276
A + R+ ME++G ++ Y+V ++ + G E L E D G K +T+ Y+
Sbjct: 336 RALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYS 395
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ C++ DEA K+ + + GC+PNA TF + + GN KA +V+K+ +
Sbjct: 396 ALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKI 455
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ + +L+ GL K K+ EA V
Sbjct: 456 NCAENEVCYSVLIHGLCKDGKVMEAMMV 483
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 134/306 (43%), Gaps = 37/306 (12%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD-ELG 127
+ A S F+ +E ++ + + ++ E + ++YG+A + + A+ F +M E
Sbjct: 79 IENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFY 138
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEI--PKKYNLSPDKISYGLLLKSHCDSGSSD 185
+V SFN++L ++ +D+ ++ + K N+ P+ +S+ L++KS C G D
Sbjct: 139 CKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVD 198
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A+EL EM + TY T+++ L K +EA
Sbjct: 199 NAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEA----------------------- 235
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
L+DEM+ G P ++N L+ CK K+ + + GC P
Sbjct: 236 -----------VSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVP 284
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ T I+ LC G DKA + V +P+ T ++ GLVK+ + + V+
Sbjct: 285 NEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVL 344
Query: 366 RTIKKK 371
++++
Sbjct: 345 VLMEER 350
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 151/366 (41%), Gaps = 43/366 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++++ + P + Y + L K R + +L++ + +
Sbjct: 198 DNAIELFREMPVRKCVPDAYTYCT--LMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFN 255
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI + G F + D M G + +++N L+ C + +L DK L D +
Sbjct: 256 VLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL-DKALSLLDRMVS 314
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P++++YG ++ G + +L ME +G V Y+ +++ L+K+G +E
Sbjct: 315 S-KCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA RL+ E KG L+ Y+ + P+ +++ EM D G P+ +++ LM
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433
Query: 280 ----------------------------TCY-------CKNEMMDEAKKVYEGLEENGCS 304
CY CK+ + EA V+ + GC
Sbjct: 434 KGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCR 493
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH--KIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ + + I LC +G+ ++A K++ E + + PD T +L L K+ I A
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAV 553
Query: 363 GVIRTI 368
++ ++
Sbjct: 554 DLLNSM 559
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 145/352 (41%), Gaps = 26/352 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKAL + + P Y + L K R D ++ + I E
Sbjct: 303 DKALSLLDRMVSSKCVPNEVTYGT--IINGLVKQGRALDGARVLVLMEERGYIVNEYVYS 360
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ + G + AMR F + + G + + ++AL+ R R D+ + E+ K
Sbjct: 361 VLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P+ ++ L+K + G+S KA+E+ +M V Y+ +++ L K G E
Sbjct: 421 -GCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVME 479
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMR--DAGLKPDTISYNFL 278
A +W++M G DV AY+ I G E +L +EM + +PD I+YN L
Sbjct: 480 AMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNIL 539
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
CK + A + + + GC P+ T ++ ++ +E +
Sbjct: 540 FNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL-------------RMLREKL---- 582
Query: 339 IPDFNTVKL---LVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
P + K LV L+K+++ A ++ + +KF W +V EL
Sbjct: 583 DPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHEL 634
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 41 PDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI---ETLIESHKNDPKIT-Q 96
PD+A+ I S ++ +P + ++ + K F ++ IE K+ KI
Sbjct: 407 PDEAMKILSEMTDKGCAPNAFTFSSLM--------KGFFEVGNSHKAIEVWKDMTKINCA 458
Query: 97 EPYLCN--LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
E +C LI + G AM + +M G V+++++++ C + + + +
Sbjct: 459 ENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKL 518
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ + + + PD I+Y +L + C S +A++LLN M ++G + VT L L
Sbjct: 519 YNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML 578
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 17/357 (4%)
Query: 28 VSKAKSKLRSEFDPDKALDIYSSVSK--HYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
VS ++S L+SE I+ S S+ Y S S+ Y+ + A S F + +
Sbjct: 53 VSVSRSFLQSE------TYIFKSASQMGSYKSGDSTFYS---LIENYANSGDFGTLFQVF 103
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTR 144
+ K + ++ E + R+YG+A + + A+ F +M DE R+V SFN++L +
Sbjct: 104 DRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQ 163
Query: 145 SRLYDKVPILFD-EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
L+ + ++ + K N+SP+ +S+ L++K+ C G D+A+E+ EM + E
Sbjct: 164 EGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDV 223
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDE 262
TY T+++ L K+ +EA L EM+ +G +NV I GD R+ +L+D
Sbjct: 224 FTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDN 283
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG- 321
M G P+ ++YN ++ C +D+A + + + + C PN T+ T I L G
Sbjct: 284 MFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGR 343
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ D + + H ++ L+ GL K++K +EA G+ + ++K PN++
Sbjct: 344 SVDGVHLLSSLEERGHHANEY-AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 399
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+ + D A+ D+M G S ++FN L+ + +V L D +
Sbjct: 227 CTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 286
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K P++++Y ++ C G DKA+ LL+ M VTY T++N L KQG +
Sbjct: 287 K-GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSV 345
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
+ L S +E++G + AY+ I+ + + E L +M + G +P+ + Y+ L+
Sbjct: 346 DGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI 405
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ +DEAK++ + GC+PNA T+ + I +GN KA +V+KE + +
Sbjct: 406 DGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 465
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
P+ +L+ GL + K++EA
Sbjct: 466 PNEICYSVLIHGLCEDGKLREA 487
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 149/349 (42%), Gaps = 20/349 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+ + + P Y + L K R D L+ S + E
Sbjct: 310 DKAVSLLDRMVASKCVPNDVTYGT--LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 367
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + + AM + +M E G +++ ++AL+ R D+ + E+ K
Sbjct: 368 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 427
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P+ +Y L+K +G+S KA+ + EM + Y+ +++ L + G E
Sbjct: 428 -GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLRE 486
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM--RDAGLKPDTISYNFL 278
A +W+ M +G+ DV AY+ I G E +L +EM +++ +PD ++YN L
Sbjct: 487 AMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNIL 546
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + A + + + GC+P+ T ++ L N + + F + ++V
Sbjct: 547 LRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR- 605
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
L K+++I A +I + +KF P W+++ EL
Sbjct: 606 -------------LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPEL 641
>gi|242049778|ref|XP_002462633.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
gi|241926010|gb|EER99154.1| hypothetical protein SORBIDRAFT_02g029280 [Sorghum bicolor]
Length = 466
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 13/276 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R+ +G DHA + FD+M G +V++F L+ A C +L D + + + ++
Sbjct: 154 LMRAAAASGSVDHARQLFDEMLRRGIAPTVVTFGTLVAALCDAGQLEDAFD-MKEVMVRQ 212
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAE 220
Y++ P+ Y L+K C+ G D AL L EM K + + + Y T++ L++ G
Sbjct: 213 YDVLPNAYVYTSLMKGLCEKGDVDAALRLKEEMAGKADLVLDSAVYATLVRPLFRVGRKG 272
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN------TYGGDPERLKELIDEMRDAGLKPDTIS 274
L EM+ +G+ D A YN + +GG ++D+MR G K D +S
Sbjct: 273 AVVGLLEEMKGRGIVADRAVYNAMLAGFCKDEKDFGG----AFAVLDDMRKNGCKADAVS 328
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
YN L+ CK +A ++ E + GC P+ T+R +C +G F +A +V E V
Sbjct: 329 YNTLVAGLCKLGRWRDASELVEDMPRRGCHPDVVTYRMLFDGMCAAGEFLEANQVLDEMV 388
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P + + VEG+ ++ + + V+ + K
Sbjct: 389 FKGFAPSKDGAQKFVEGIEREGDVVLLESVLCRLAK 424
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 179/402 (44%), Gaps = 60/402 (14%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYA---QDLTVRRLAKSKRFSDIETLIESHK 89
+ LR E DP AL ++ + AS RY+ DL + RLA ++ F +E+++
Sbjct: 13 AALRRELDPAAALRLFLNPP---ASATPFRYSLRCYDLIICRLAAARLFPAMESILSRLA 69
Query: 90 N-----DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-- 142
+ P+ +E LC +I +YG+A + A R F G R+ + N LL A
Sbjct: 70 SSSSSSGPR-PREQLLCRVISAYGRARLPAAARRAFTHPAFPGR-RTARALNTLLHALLD 127
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
R+ L D + + D + PD +Y +L+++ SGS D A +L +EM +G+ T
Sbjct: 128 CRAPLRDLLVVCHDA-----GIPPDACTYNILMRAAAASGSVDHARQLFDEMLRRGIAPT 182
Query: 203 TVT------------------------------------YTTVLNCLYKQGNAEEAERLW 226
VT YT+++ L ++G+ + A RL
Sbjct: 183 VVTFGTLVAALCDAGQLEDAFDMKEVMVRQYDVLPNAYVYTSLMKGLCEKGDVDAALRLK 242
Query: 227 SEMEKKG-VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
EM K + LD A Y + + G + L++EM+ G+ D YN ++ +CK
Sbjct: 243 EEMAGKADLVLDSAVYATLVRPLFRVGRKGAVVGLLEEMKGRGIVADRAVYNAMLAGFCK 302
Query: 285 NEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+E A V + + +NGC +A ++ T + LC G + A ++ ++ PD
Sbjct: 303 DEKDFGGAFAVLDDMRKNGCKADAVSYNTLVAGLCKLGRWRDASELVEDMPRRGCHPDVV 362
Query: 344 TVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKKVE 384
T ++L +G+ + EA V+ + K F P+ A K VE
Sbjct: 363 TYRMLFDGMCAAGEFLEANQVLDEMVFKGFAPSKDGAQKFVE 404
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 170/343 (49%), Gaps = 12/343 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +I+ SV + P + Y + + A S++ + ++ + ++ + ++ N
Sbjct: 290 EARNIFDSVIRKGIKPNVTIYG--ILLHGYATEGSLSEMHSFLDLMVGN-GVSPDHHIFN 346
Query: 103 LIR-SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ +Y + M D AM FD+M + +++++ AL+ A + D + F+++ +
Sbjct: 347 IMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDE 406
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD + L+ C +KA EL E+ ++G+ + TV + T++ L ++G E
Sbjct: 407 -GMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVME 465
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A+RL M + GV DV +YN + + G + +L+D + GLKPD ++YN L+
Sbjct: 466 AQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLH 525
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK +D+A ++ + G +P+ T+ T ++ L +G F +A +++ +
Sbjct: 526 GYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQM 585
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK------FPPNVL 377
+ T +++ GL K + EA + ++ K F N++
Sbjct: 586 NIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 152/348 (43%), Gaps = 14/348 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSR-YAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEP- 98
+ AL ++ + H A P S R + Q LT A+ S+ + +L + I P
Sbjct: 33 NDALKLFDEMLTH-ARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91
Query: 99 --YLCNLIRSYGQAGMFDHAMRTFDQMDELG--TPRSVISFNALLFACTRSRLYDKVPIL 154
LI + + G H F + + G +VI L C R+ + IL
Sbjct: 92 SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT---VTYTTVLN 211
+P+ + +PD SY +LLK C+ +++ALELL+ M + G T VTYTTV++
Sbjct: 152 LRRMPE-FGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
L K + A+ ++ M KGV + Y I G + + +++ EM GL+P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D Y L+ CKN EA+ +++ + G PN T + ++ G+ + +
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
V PD + ++ KK I EA + ++ ++ PN++
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIV 378
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 8/322 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL- 100
D+A+ I+ + + SP Y + L K R D L + D +T + ++
Sbjct: 359 DEAMHIFDKMRQQRLSPNIVTYGA--LIDALCKLGRVDD-AVLKFNQMIDEGMTPDIFVF 415
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIP 159
+L+ ++ A F ++ + G + FN L+ C R+ + ++ ++
Sbjct: 416 SSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLI--DLM 473
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + PD ISY L+ HC +G D+A +LL+ + + G++ VTY T+L+ K
Sbjct: 474 LRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRI 533
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
++A L+ EM KG+ DV YN + + G KEL M ++ + + +YN +
Sbjct: 534 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNII 593
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CKN +DEA K++ L + T I L G + A +F
Sbjct: 594 INGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGL 653
Query: 339 IPDFNTVKLLVEGLVKKKKIKE 360
+PD T L+ E L+K+ ++E
Sbjct: 654 VPDVETYCLIAENLIKEGSLEE 675
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 2/225 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G D A + D + +G +++N LL ++R D LF E+ K
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK- 546
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++Y +L +G +A EL M N ++ TY ++N L K +EA
Sbjct: 547 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEA 606
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ + K + LD+ N+ I GG E +L + GL PD +Y +
Sbjct: 607 FKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAEN 666
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
K ++E +++ +EENG +PN+ + L G+ ++A
Sbjct: 667 LIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 13/281 (4%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL---YDKVPILFDEIPKKYNL 164
G G+ D A++ FD+M P SV +FN LL A +R+R + V LF+ + ++ ++
Sbjct: 28 GSLGLND-ALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSI 86
Query: 165 --SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT-TVTYTTVLNCLYKQGNAEE 221
+P +Y +L+ C G + G V TV ++ +L L +E
Sbjct: 87 KVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDE 146
Query: 222 A-ERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAG---LKPDTISYN 276
A + L M + G DV +Y++ + E EL+ M D G P+ ++Y
Sbjct: 147 ATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYT 206
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK +M+D AK V++ + + G PN T+ I+ G + + ++ +E
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTH 266
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNV 376
PD +L++ L K + EA+ + + I+K PNV
Sbjct: 267 GLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNV 307
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 82/192 (42%), Gaps = 3/192 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPR 130
L ++ RFS+ + L S N + Y N+I + D A + F +
Sbjct: 562 LFQTGRFSEAKELYLSMIN-SRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQL 620
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ + N ++ A + + LF I Y L PD +Y L+ ++ GS ++ EL
Sbjct: 621 DIFTANIMIGALLKGGRKEDAMDLFATI-SAYGLVPDVETYCLIAENLIKEGSLEELDEL 679
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
+ ME G + ++ L +G+ A S++++K L+ + ++ I+
Sbjct: 680 FSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSR 739
Query: 251 GDPERLKELIDE 262
G+ ++L + + E
Sbjct: 740 GEYQQLAKSLPE 751
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 177/374 (47%), Gaps = 23/374 (6%)
Query: 16 AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
++TT +I ++ + R D A +++ + SP + Y L + L ++
Sbjct: 315 GCAANTTLCNIVINTICKQGRV----DDAFQFLNNMGSYGCSPDTISYTTVL--KGLCRA 368
Query: 76 KRFSDIETLIES--HKNDP--KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
+R+ D + L++ KN P ++T ++C L Q G+ + A +QM E G +
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILC----QKGLIEQATMLIEQMSEHGCEVN 424
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++++NAL+ C + R+ D LF +P K P+ I+Y LL C++ D A EL
Sbjct: 425 IVTYNALVNGFCVQGRV-DSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAEL 479
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
L EM K VT+ +++ ++G +EA L +M + G ++ YN + T
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITN 539
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ E EL+ + G+ PD ++Y+ ++ + + ++EA K++ +++ G P A
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ + LC N D A F V +P+ T L+EGL + +KE + ++R +
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 659
Query: 370 KK--FPPNVLRAWK 381
+ N+L W+
Sbjct: 660 SRGVLNKNLLEEWR 673
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 158/357 (44%), Gaps = 49/357 (13%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDH 115
+P ++R + + LA++ R D T S P + YLC LIR+ + G
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRAT---SRGEAPDV----YLCTKLIRNLCRRGRTSD 96
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R + GT V ++N L+ R D L +P ++PD +Y ++
Sbjct: 97 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 152
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ CD G +AL LL++M ++G + + VTYT +L + K +A + EM KG
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212
Query: 236 LDVAAYNVRIT------------------NTYGGDP------------------ERLKEL 259
++ YNV I ++YG P E ++EL
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
EM + P+ ++++ L+ +C+ M++ A +V E + +GC+ N T I +C
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
G D A++ PD + +++GL + ++ ++AK +++ ++K PPN
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 157/345 (45%), Gaps = 24/345 (6%)
Query: 29 SKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS--RYAQDLTVRRLAKSKRFSDIETLIE 86
S A LR+ A+D+++ Y + V+ RY Q RRL S + +
Sbjct: 95 SDAARVLRAAERSGTAVDVFA-----YNTLVAGYCRYGQLDAARRLIASMPVAP-----D 144
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
++ P +IR G A+ D M G SV+++ LL A +S
Sbjct: 145 AYTYTP----------IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKST 194
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+ + + DE+ K +P+ ++Y +++ C G D A E LN + + G + TV+Y
Sbjct: 195 GFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
TTVL L E+ E L++EM +K + +++ + GG ER +++++M
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +T N ++ CK +D+A + + GCSP+ ++ T + LC + ++
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
A ++ KE V + P+ T + L +K I++A +I + +
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 143/283 (50%), Gaps = 7/283 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
+I +AG HA+ + QM++ P +++ L+ +++ RL D V +L + + +
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD + ++++S C D A EL+ EM ++G+ +TY+ +++ L K +E
Sbjct: 180 H--VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDE 237
Query: 222 A-ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L E+ ++G D+ Y+ I RL++ +D + P I+YN L+
Sbjct: 238 AVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG--RLRDAVDIFEEMSCAPTAITYNSLIG 295
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YC+ MDEA ++ + ++ C+P+ T+ T + C G D AY++F++ V P
Sbjct: 296 GYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSP 355
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
D T LV+GL + ++++A ++ I ++ P + + V
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 398
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 11/295 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDP-KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K+ R D + E P IT +LI Y +AG D A+R +M +
Sbjct: 265 LCKAGRLRDAVDIFEEMSCAPTAITYN----SLIGGYCRAGDMDEAIRLLGKMVDDNCAP 320
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
VI++ L+ A C RL D + + K LSPD +++ L+ C G + ALE
Sbjct: 321 DVITYTTLMSAFCKMGRLDDAYELFQQMVANK--LSPDVVTFTSLVDGLCGEGRMEDALE 378
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL E+ +G T TY V++ K +AE L ++ +G + YN+ +
Sbjct: 379 LLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 438
Query: 250 -GGDPERLKELIDEMR-DAGLKPDTIS-YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G ++ + +D++ + G P +++ Y ++ C++ D+A + YE + + G P
Sbjct: 439 RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPA 498
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
A TF T ++ LC + +A+++ +E + P T +V + I++A
Sbjct: 499 AATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 139/311 (44%), Gaps = 40/311 (12%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L+K+ R D +++ + + L +++S D A ++M G
Sbjct: 156 VHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ I+++AL+ C RL + V +L E+ ++ +PD ++Y ++ C +G A
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRR-GFTPDIVTYSTVIDGLCKAGRLRDA 274
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+++ EM T +TY +++ + G+ +EA RL +M VD + A
Sbjct: 275 VDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKM----VDDNCA-------- 319
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
PD I+Y LM+ +CK +D+A ++++ + N SP+
Sbjct: 320 ----------------------PDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 357
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TF + + LCG G + A ++ +E P T +V+G K ++++A+ ++
Sbjct: 358 VTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVAD 417
Query: 368 IKKK-FPPNVL 377
+ + F PN +
Sbjct: 418 FRSRGFVPNTV 428
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 152/354 (42%), Gaps = 41/354 (11%)
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS-YGQAGMFDHAMR 118
SS +A + +R L S + + L+ D ++ +P N I + A AM
Sbjct: 10 SSTFA--VVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMA 67
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD+M ELG +N L+ ++RL D+ L ++ K ++P + + +++
Sbjct: 68 LFDKMAELGAVNHTTYYN-LIHPLCKARLLDEAMGLLLDM-KSRGMNPGTLLHNVVIGGL 125
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C +G AL + +M N +TYT +++ L K G +A ++ EM D
Sbjct: 126 CRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDN 184
Query: 239 AAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA------ 291
V + + GD + +EL++EM G+ + I+Y+ L+ CK E +DEA
Sbjct: 185 TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLG 244
Query: 292 --------------KKVYEGL-------------EENGCSPNATTFRTWIYHLCGSGNFD 324
V +GL EE C+P A T+ + I C +G+ D
Sbjct: 245 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMD 304
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+A ++ + V + PD T L+ K ++ +A + + + K P+V+
Sbjct: 305 EAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 19/265 (7%)
Query: 123 MDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M + G P +F +L S +L P+L DEI + LSPD + +L CD+
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEI-RDRGLSPDPVELNTILAELCDA 59
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+ A+ L ++M G V TY +++ L K +EA L +M+ +G++ +
Sbjct: 60 RDTTTAMALFDKMAELGA-VNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLH 118
Query: 242 NVRITNTYGG--DPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
NV I GG RL+ + +M DA PD ++Y L+ K + +A +V +
Sbjct: 119 NVVI----GGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQ 173
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN--TVKLLVEGLVK 354
+ P+ TT + LC D A ++ +E M+H+ N T LV+GL K
Sbjct: 174 EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE--MLHRGMAANAITYSALVDGLCK 231
Query: 355 KKKIKEAKGVI--RTIKKKFPPNVL 377
+++ EA ++ ++ F P+++
Sbjct: 232 CERLDEAVALLLGEVTRRGFTPDIV 256
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L+DE+RD GL PD + N ++ C A +++ + E G + N TT+ I+ LC
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLC 91
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLR 378
+ D+A + + P +++ GL + +++ A GV R + PP+ L
Sbjct: 92 KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLT 151
Query: 379 AWKKVE 384
K V
Sbjct: 152 YTKLVH 157
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 7/191 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ AL++ +++ P + Y + V KS + E L+ ++ +
Sbjct: 374 EDALELLEEITRRGCPP--TIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYN 431
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG--TPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
L+ +AG D A++ DQ++ G P SV + +L A C R D V + I
Sbjct: 432 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 491
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ Y P ++ ++ + C + +A ELL EM G T V++ + G
Sbjct: 492 QRGY--VPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 549
Query: 219 AEEAERLWSEM 229
++A+ L SE+
Sbjct: 550 IQKADELASEL 560
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 6/278 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ + + F++M G PRSV S+ AL+ + R Y+ V + E KK
Sbjct: 148 IISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYE-VSLELLERMKKE 206
Query: 163 NLSPDKISYGLLLKSHCDSG-SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P ++Y ++ S G + + L L EM ++G++ +TY T+LN +G +E
Sbjct: 207 KVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDE 266
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE ++ M + G+ D+ Y + T+G E++ EL+ EM +G PD SYN L+
Sbjct: 267 AEMVFRTMNEGGMVPDITTYR-NLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLL 325
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y + A V+ ++E C PNA T+ + G G +D ++F E + +
Sbjct: 326 EAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTE 385
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
PD T +L+E + KE + +++ PN+
Sbjct: 386 PDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNM 423
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G +K+ E+ EM GV + +YT ++N
Sbjct: 128 LFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSY 187
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPD 271
+ G E + L M+K+ V + YN I + G + E L L EMR G++PD
Sbjct: 188 GRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPD 247
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
I+YN L+ + DEA+ V+ + E G P+ TT+R + +K ++ K
Sbjct: 248 IITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLK 307
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
E +PD ++ +L+E K I+ A GV R +++ + PN +
Sbjct: 308 EMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAV 354
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 143/313 (45%), Gaps = 11/313 (3%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHK---NDPK 93
S+ D A+ ++ + + P + Y+ L + R+ D+ L K +P
Sbjct: 330 SKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNL--YGGHGRYDDVRELFLEMKVSNTEPD 387
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+ L I +G+ G F + F M E ++ ++ L++AC + L++
Sbjct: 388 VGTYNVL---IEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKK 444
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ + +K + P +Y +++++ + S ++AL + N M G + T TY +++N
Sbjct: 445 ILLHMDEK-GIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMF 503
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
+ G +E+E + +M + GV D ++N I GG E + E+ A +PD
Sbjct: 504 ARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDE 563
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++ +++ YC ++DE+++ + + +G P+ + I S +D AY+V E
Sbjct: 564 RTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVLDE 623
Query: 333 SVMVHKIPDFNTV 345
V +K+ + + V
Sbjct: 624 MV-TNKVSNIHQV 635
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 7/304 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L K ++ S++ +ES N P I+ L + +Y G HAM F QM E
Sbjct: 292 TFGKLNKLEKVSELLKEMESSGNLPDISSYNVL---LEAYASKGDIRHAMGVFRQMQEAR 348
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++++ LL YD V LF E+ K N PD +Y +L++ + G +
Sbjct: 349 CVPNAVTYSMLLNLYGGHGRYDDVRELFLEM-KVSNTEPDVGTYNVLIEVFGEGGYFKEV 407
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L ++M + VE TY ++ K G E+A+++ M++KG+ AY +
Sbjct: 408 VTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAY-TGVIE 466
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YG E + + M + G KP +YN L+ + + + E++ + + E+G +
Sbjct: 467 AYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVAR 526
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ +F I G F++A K + E PD T + ++ + E++
Sbjct: 527 DRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQF 586
Query: 366 RTIK 369
R I+
Sbjct: 587 REIR 590
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 39/260 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKK 161
LI SYG+ G ++ ++ ++M + S++++N ++ +C R L ++ + LF E+ +
Sbjct: 183 LINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEM-RH 241
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD I+Y LL + + G D+A + M G+ TY ++ K E+
Sbjct: 242 EGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEK 301
Query: 222 AERLWSEMEKKGVDLDVAAYNV----------------------------------RITN 247
L EME G D+++YNV + N
Sbjct: 302 VSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLN 361
Query: 248 TYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YGG + ++EL EM+ + +PD +YN L+ + + E ++ + E P
Sbjct: 362 LYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEP 421
Query: 306 NATTFRTWIYHLCGSGNFDK 325
N T+ IY CG G +
Sbjct: 422 NMGTYEGLIYA-CGKGGLHE 440
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 90/229 (39%), Gaps = 39/229 (17%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++AL +++++++ + P Y + + A+ + + E ++
Sbjct: 475 EEALVMFNTMNEMGSKPTVETY--NSLINMFARGGLYKESEAIMWKMGESGVARDRDSFN 532
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I Y Q G F+ A++T+ ++++ +F A+L + L D+ F EI +
Sbjct: 533 GVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREI-RA 591
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM--------------------------- 194
+ P + Y +++ + S D A E+L+EM
Sbjct: 592 SGILPSVMCYCMMIAVYARSNRWDDAYEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQ 651
Query: 195 ---------ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
++G + Y T+L L+ G E A R+ SE K+G+
Sbjct: 652 MVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGL 700
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 177/374 (47%), Gaps = 23/374 (6%)
Query: 16 AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
++TT +I ++ + R D A +++ + SP + Y L + L ++
Sbjct: 315 GCAANTTLCNIVINTICKQGRV----DDAFQFLNNMGSYGCSPDTISYTTVL--KGLCRA 368
Query: 76 KRFSDIETLIES--HKNDP--KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
+R+ D + L++ KN P ++T ++C L Q G+ + A +QM E G +
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILC----QKGLIEQATMLIEQMSEHGCEVN 424
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++++NAL+ C + R+ D LF +P K P+ I+Y LL C++ D A EL
Sbjct: 425 IVTYNALVNGFCVQGRV-DSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAEL 479
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
L EM K VT+ +++ ++G +EA L +M + G ++ YN + T
Sbjct: 480 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 539
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ E EL+ + G+ PD ++Y+ ++ + + ++EA K++ +++ G P A
Sbjct: 540 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 599
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ + LC N D A F V +P+ T L+EGL + +KE + ++R +
Sbjct: 600 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 659
Query: 370 KK--FPPNVLRAWK 381
+ N+L W+
Sbjct: 660 SRGVLNKNLLEEWR 673
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 158/357 (44%), Gaps = 49/357 (13%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDH 115
+P ++R + + LA++ R D T S P + YLC LIR+ + G
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRAT---SRGEAPDV----YLCTKLIRNLCRRGRTSD 96
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R + GT V ++N L+ R D L +P ++PD +Y ++
Sbjct: 97 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 152
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ CD G +AL LL++M ++G + + VTYT +L + K +A + EM KG
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212
Query: 236 LDVAAYNVRIT------------------NTYGGDP------------------ERLKEL 259
++ YNV I ++YG P E ++EL
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
EM + P+ ++++ L+ +C+ M++ A +V E + +GC+ N T I +C
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
G D A++ PD + +++GL + ++ ++AK +++ ++K PPN
Sbjct: 333 QGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPN 389
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 157/345 (45%), Gaps = 24/345 (6%)
Query: 29 SKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS--RYAQDLTVRRLAKSKRFSDIETLIE 86
S A LR+ A+D+++ Y + V+ RY Q RRL S + +
Sbjct: 95 SDAARVLRAAERSGTAVDVFA-----YNTLVAGYCRYGQLDAARRLIASMPVAP-----D 144
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
++ P +IR G A+ D M G SV+++ LL A +S
Sbjct: 145 AYTYTP----------IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKST 194
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+ + + DE+ K +P+ ++Y +++ C G D A E LN + + G + TV+Y
Sbjct: 195 GFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 253
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
TTVL L E+ E L++EM +K + +++ + GG ER +++++M
Sbjct: 254 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 313
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +T N ++ CK +D+A + + GCSP+ ++ T + LC + ++
Sbjct: 314 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 373
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
A ++ KE V + P+ T + L +K I++A +I + +
Sbjct: 374 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 418
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 154/302 (50%), Gaps = 13/302 (4%)
Query: 67 LTVRRLAKS-KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
L V RL + + F ++E+L K T Y+ I YG++G A+ TF++M
Sbjct: 409 LRVHRLDDALELFGNMESL------GVKPTAYTYIV-FIDYYGKSGDSVSALETFEKMKT 461
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G ++++ NA L++ ++ + +F + K L PD ++Y +++K + G D
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A++LL+EM G E + +++N LYK +EA +++ M++ + V YN +
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 246 TNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G + EL + M G P+TI++N L C CKN+ + A K+ + + GC
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKE-SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ T I+ L +G +A F + +V+ PDF T+ L+ G+VK I++A
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY--PDFVTLCTLLPGVVKASLIEDAYK 698
Query: 364 VI 365
+I
Sbjct: 699 II 700
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 153/368 (41%), Gaps = 44/368 (11%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R + ++ ++ + D + L+ + +AG F A T D M + G
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++ ++N L+ R D LF + + + P +Y + + + SG S ALE
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 191 LNEMENKGVEVT-----------------------------------TVTYTTVLNCLYK 215
+M+ KG+ +VTY ++ C K
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDT 272
G +EA +L SEM + G + DV N I Y D R+ E + M++ LKP
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD--RVDEAWKMFMRMKEMKLKPTV 573
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ KN + EA +++EG+ + GC PN TF T LC + A K+ +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPA 392
+ + +PD T ++ GLVK ++KEA +KK P+ + + G+V A
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP---GVVKA 690
Query: 393 PAVGDGQK 400
+ D K
Sbjct: 691 SLIEDAYK 698
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 118/252 (46%), Gaps = 10/252 (3%)
Query: 103 LIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPK 160
+I +AG D A+ + D M + + ++ L+ ++S RLY+ + E
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF--EGML 918
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y P+ Y +L+ +G +D A L M +GV TY+ +++CL G +
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDA-GLKPDTISYN 276
E + E+++ G++ DV YN+ I G RL+E L +EM+ + G+ PD +YN
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGL--GKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ M++EA K+Y ++ G PN TF I SG + AY V++ V
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 337 HKIPDFNTVKLL 348
P+ T + L
Sbjct: 1097 GFSPNTGTYEQL 1108
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG++G D + +M + I+ N ++ ++ D L+ ++
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ SP +YG L+ SG +A +L M + G Y ++N K G A+ A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ M K+GV D+ Y+V + G + E++++GL PD + YN ++
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 282 YCKNEMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K+ ++EA ++ ++ + G +P+ T+ + I +L +G ++A K++ E P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
+ T L+ G K + A V +T + F PN
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+ +S G A +M E G + S+N L+ +SR + ++ + +
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE- 217
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P +Y L+ D + LL EME G++ T+T + L + G EA
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M+ +G DV Y V I + KE+ ++M+ KPD ++Y L+
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ N +D K+ + +E++G P+ TF + LC +GNF +A+ +P+
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+T L+ GL++ ++ +A
Sbjct: 398 LHTYNTLICGLLRVHRLDDA 417
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 123/286 (43%), Gaps = 21/286 (7%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG-------------- 108
Y DL +R+ K + + T+ +S + Q PY +R +G
Sbjct: 139 YVFDLMQKRIIKRDTNTYL-TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHL 197
Query: 109 --QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
++ AM + +M G S+ ++++L+ + R D V L E+ + L P
Sbjct: 198 LLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKP 256
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ + ++ +G ++A E+L M+++G VTYT +++ L + A+ ++
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M+ D Y + + + + D + +K+ EM G PD +++ L+ CK
Sbjct: 317 EKMKTGRHKPDRVTY-ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
EA + + + G PN T+ T I L D A ++F
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 142/371 (38%), Gaps = 47/371 (12%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL+ + + +P + A + ++ LAK+ R + + + K+ +
Sbjct: 448 DSVSALETFEKMKTKGIAP--NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+++ Y + G D A++ +M E G VI N+L+ ++ D+ +F +
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM- 564
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ L P ++Y LL +G +A+EL M KG T+T+ T+ +CL K
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-------------------DPERLKELI 260
A ++ +M G DV YN I D L L+
Sbjct: 625 TLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL 684
Query: 261 DEMRDAGLKPDT--ISYNFLMTC---------------YCKNEMMDEAKKVYEGLEENG- 302
+ A L D I NFL C +D A E L NG
Sbjct: 685 PGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGI 744
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVF----KESVMVHKIPDFNTVKLLVEGLVKKKKI 358
C + I + C N A +F K+ + K+P +N LL+ GL++ I
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN---LLIGGLLEADMI 801
Query: 359 KEAKGVIRTIK 369
+ A+ V +K
Sbjct: 802 EIAQDVFLQVK 812
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 109/261 (41%), Gaps = 15/261 (5%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI----LFDEIPKKYNLSP 166
G AM F QM +L P V L S + D I L++ + NL
Sbjct: 657 GQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKG--VEVTTVTYTTVLNCLYKQGNAEEAER 224
+ + +L ++ D+ S + N + G + V + Y+ K N A
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC------KHNNVSGART 770
Query: 225 LWSEMEKK-GVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L+ + K GV + YN+ I D E +++ +++ G PD +YNFL+ Y
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PD 341
K+ +DE ++Y+ + + C N T I L +GN D A ++ + + P
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T L++GL K ++ EAK
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAK 911
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 148/357 (41%), Gaps = 17/357 (4%)
Query: 10 LCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR--YAQDL 67
LC+A+ G + + VS K+K R ++ + K +A + SR + +
Sbjct: 5 LCSASLC-GDISVGDACLVSNIKAKCRD--------NLVTGGLKFHALKIGSRKKHWRRK 55
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DEL 126
++R S + SD + + P ++ + ++S+ D + F + L
Sbjct: 56 SMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDT---DSSFSYFKSVAGNL 112
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+ + N +L A +++ +FD + K+ + D +Y + KS G +
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRI-IKRDTNTYLTIFKSLSVKGGLKQ 171
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRI 245
A L +M G + +Y +++ L K EA ++ M +G + Y+ + +
Sbjct: 172 APYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMV 231
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
D + + L+ EM GLKP+ ++ + + ++EA ++ + +++ GC P
Sbjct: 232 GLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+ T+ I LC + D A +VF++ PD T L++ + + K
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMD 124
+L + L KS R + L K IT + Y N LI + G AGM + A + ++++
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 125 ELGTPRSVISFNALL 139
G +V +FNAL+
Sbjct: 1060 RAGLEPNVFTFNALI 1074
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI G A+ D+M E+G ++I+ NAL+ C ++ D V +L D + +
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV-LLIDRMVET 206
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P++++YG +LK C SG + A+ELL +ME + +++ V Y+ +++ L K G+ +
Sbjct: 207 -GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGG-------------------DPERLKELID 261
A L++EME KG D+ Y I Y G D LID
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 262 ----------------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
EM G+ PDT++Y L+ +CK +D+A + + + GC P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N TF I C + D ++F++ + + D T L++G + K++ AK +
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 366 R-TIKKKFPPNVL 377
+ + ++ P+++
Sbjct: 446 QEMVSRRVRPDIV 458
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 2/252 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + D A D M G ++ +FN L+ ++ L D LF ++ +
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D ++Y L++ C+ G + A EL EM ++ V V+Y +L+ L G E+
Sbjct: 417 -GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ ++EK ++LD+ YN+ I + +L + G+KPD +YN ++
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA ++ +EE+G SPN T+ I G G+ K+ K+ +E
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 341 DFNTVKLLVEGL 352
D +TVK++V+ L
Sbjct: 596 DASTVKMVVDML 607
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 125/269 (46%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR + AG +D + M + V++F+AL+ + + L E+ ++
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR- 346
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD ++Y L+ C DKA +L+ M +KG T+ ++N K ++
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M +GV D YN I G E KEL EM ++PD +SY L+
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N ++A +++E +E++ + + I+ +C + D A+ +F + PD
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +++ GL KK + EA + R +++
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 160/385 (41%), Gaps = 14/385 (3%)
Query: 2 TSLRHIRRLCTATTAAGSSTTASSISVSKAK----SKLRS---EFDPDKALDIYSSVSKH 54
T L L TA + SS+S K K +LRS + D A+D++ +++
Sbjct: 7 TRLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRS 66
Query: 55 YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFD 114
P +++ +V +A++K++ + L + + L +I +
Sbjct: 67 RPRPRLIDFSRLFSV--VARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLS 124
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
A ++ +LG ++F+ L+ C R+ + + ++ + + P I+
Sbjct: 125 LAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK--PTLITLNA 182
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C +G A+ L++ M G + VTY VL + K G A L +ME++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ LD Y++ I G + L +EM G K D I Y L+ +C D+
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
K+ + + +P+ F I G +A ++ KE + PD T L++G
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
Query: 353 VKKKKIKEAKGVI-RTIKKKFPPNV 376
K+ ++ +A ++ + K PN+
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNI 387
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S G D A++ DQ+ +VI++ L+ A D+ L DE+ +
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSR- 253
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y +++ C G D+A E++ +E KG E ++Y +L L QG EE
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L ++M + D +V Y++ IT G E L+ M++ GL PD SY+ L+
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+ +D A + E + +GC P+ + T + LC +G D+A ++F + V P+
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433
Query: 342 FNTVKLLVEGLVKK-KKIKEAKGVIRTIKKKFPPN 375
++ + L KI+ ++ + P+
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPD 468
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 12/311 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEP 98
D+A ++ ++ P Y ++ +R L ++ + E L+ S K DP +
Sbjct: 276 DRAFEMIRNLELKGCEPDVISY--NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
L I + + G + AM M E G S++ L+ A C RL V I F E
Sbjct: 334 IL---ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL--DVAIEFLE 388
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
PD ++Y +L + C +G +D+ALE+ ++ G + +Y T+ + L+ G
Sbjct: 389 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 448
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+ A + EM G+D D YN I+ G ++ EL+ +MR P ++YN
Sbjct: 449 DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYN 508
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ +CK +++A V + + NGC PN TT+ I + +G +A ++ + V +
Sbjct: 509 IVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 568
Query: 337 HKIPDFNTVKL 347
+ I +++ +L
Sbjct: 569 NAISEYSFKRL 579
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 167/375 (44%), Gaps = 53/375 (14%)
Query: 4 LRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRY 63
L H R L T + + + S S S A++ + D I + + ++ + R
Sbjct: 30 LSHNRSLLTFSNSNPNHDNGKSFSSSGARNLQATTTDAA----IPTERRQQHSQSLGFRD 85
Query: 64 AQDLTV-RRLAKSKRFSD----IETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAM 117
Q L + R +S + + +ET++ N I LC LI+ + A+
Sbjct: 86 TQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVI-----LCTKLIKGFFTLRNVPKAV 140
Query: 118 RTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
R + +++ G P V ++NAL+ C +R+ D +L D + K + SPD ++Y +++
Sbjct: 141 RVMEILEKFGQP-DVFAYNALINGFCKMNRIDDATRVL-DRMRSK-DFSPDTVTYNIMIG 197
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
S C G D AL++L+++ + + T +TYT ++ +G +EA +L
Sbjct: 198 SLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKL----------- 246
Query: 237 DVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+DEM GLKPD +YN ++ CK M+D A ++
Sbjct: 247 -----------------------LDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIR 283
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
LE GC P+ ++ + L G +++ K+ + P+ T +L+ L +
Sbjct: 284 NLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDG 343
Query: 357 KIKEAKGVIRTIKKK 371
KI+EA +++ +K+K
Sbjct: 344 KIEEAMNLLKLMKEK 358
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 39/287 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA--------------------- 141
+IR + GM D A ++ G VIS+N LL A
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324
Query: 142 ---------------CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
C ++ + + +L ++ K+ L+PD SY L+ + C G D
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLL--KLMKEKGLTPDAYSYDPLIAAFCREGRLDV 382
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+E L M + G V Y TVL L K G A++A ++ ++ + G + ++YN +
Sbjct: 383 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 442
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ GD R +I EM G+ PD I+YN +++C C+ M+D+A ++ + P
Sbjct: 443 ALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHP 502
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ T+ + C + + A V V P+ T +L+EG+
Sbjct: 503 SVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 1/213 (0%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ N+ PD +SY ++ C +KA++LL EME E + TY +++ L K+G
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
EEA RL EM++KG+++DV Y+ I+ G +R K L DEM + G+ P+ + Y+ L
Sbjct: 62 EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + EA V + E G P+ T+ I LC G KA +F +
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P T +L+ GL K+ I +A + T+ +K
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK 214
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 152/331 (45%), Gaps = 6/331 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA+D+ + P S Y + + L K R + L+ K
Sbjct: 27 EKAVDLLVEMEGSSCEPNSFTYC--ILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYS 84
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G D FD+M E G +V+ ++ L+ + L+ + + + ++
Sbjct: 85 TLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTER 144
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y ++ C G + KAL+L + M KG E +TVTY ++N L K+G +
Sbjct: 145 -GIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGD 203
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG--LKPDTISYNFL 278
A +++ M +KG L+V +YN I G + +L + + G ++PD I++N +
Sbjct: 204 AFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTV 263
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +D+A ++Y+ + E G N T I SG DKA +++K +
Sbjct: 264 IQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGL 323
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+P T ++++G K + AKG+ +K
Sbjct: 324 VPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A + F+ M E G V+S+N L+ + D+ LF + +
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Query: 163 N-LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N + PD I++ +++ C G DKA+E+ + M +G T ++ K G ++
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDK 310
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL-KELIDEMRDAGLKPDTISYNFLMT 280
A LW + K G+ Y+V I K L M+ +GL P YN LM
Sbjct: 311 AMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMA 370
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +++A+++++ ++E+ C P+ +F I +G+ A ++ + + P
Sbjct: 371 SLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTP 430
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D T + L K +++EAKG ++
Sbjct: 431 DAYTYSSFINRLSKLGQMEEAKGAFDSM 458
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 154/333 (46%), Gaps = 14/333 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQEP 98
KALD++ +++ P + Y ++ + L K D ET++E K ++
Sbjct: 168 KALDLFDLMTEKGEEPSTVTY--NVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYN- 224
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELG--TPRSVISFNALLFACTRSRLYDKVPILFD 156
LI G D AM+ F + E G VI+FN ++ + DK ++D
Sbjct: 225 ---TLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ ++ + + + +L+ + SG DKA+EL + G+ ++ TY+ +++ K
Sbjct: 282 TMIERGSFG-NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISY 275
A+ L+S M+ G+ + YN + + E+ + L EM+++ +PDTIS+
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ K + AK++ +++ G +P+A T+ ++I L G ++A F +
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIA 460
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
PD + L++G +I+E ++R +
Sbjct: 461 SGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 136/276 (49%), Gaps = 7/276 (2%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
Y C +I + G A+ FD M E G S +++N L+ C + D I
Sbjct: 153 YTC-MIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETM 211
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG--VEVTTVTYTTVLNCLYK 215
+ K L + +SY L+ C++G D+A++L + + G VE +T+ TV+ L K
Sbjct: 212 LEKGKRL--EVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCK 269
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
+G ++A ++ M ++G ++ ++ I G ++ EL + GL P + +
Sbjct: 270 EGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTT 329
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y+ ++ +CK M++ AK ++ ++ +G SP + T + LC + ++A ++F+E
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ PD + ++++G +K I AK ++ +++
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQ 425
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 128/287 (44%), Gaps = 16/287 (5%)
Query: 42 DKALDIYSSV--SKHYASPVSSRYAQDLTVRRLAKSKRFSDI----ETLIESHKNDPKIT 95
D+A+ ++SS+ +Y P + + ++ L K R +T+IE T
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITF--NTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFT 294
Query: 96 QEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
C+ LI Y ++G+ D AM + ++ +LG S +++ ++ + + + L
Sbjct: 295 -----CHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F + K LSP Y L+ S C S ++A L EM+ E T+++ +++
Sbjct: 350 FSRM-KISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
K G+ A+ L ++M++ G+ D Y+ I + G E K D M +G+ PD
Sbjct: 409 KAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNH 468
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
Y+ L+ + N+ ++E + + + G + + + LC S
Sbjct: 469 VYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNS 515
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M+ + PD +SYN ++ CK + +++A + +E + C PN+ T+ + LC G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
++A ++ E D L+ G K + K + ++K PNV+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVV 116
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 41/337 (12%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + L K+ + ++ E ++ ++ LI + + G A R FD+
Sbjct: 224 YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 283
Query: 123 MDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD- 180
M + I++ A++ C R+ + + + + K+ L PD+++Y L+ +C
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR--LEPDEVTYTALIDGYCKE 341
Query: 181 ----------------------------------SGSSDKALELLNEMENKGVEVTTVTY 206
G D A ELL+EM KG+E+ TY
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMR 264
+++N L K GN ++A +L +ME G D Y + + Y E R EL+ +M
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT-LMDAYCKSREMVRAHELLRQML 460
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
D L+P +++N LM +C + M+++ +K+ + + E G PNATT+ + I C N
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
++++ +PD NT +L++G K + +KEA
Sbjct: 521 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 557
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G A +QM ++G +++++ AL + D L E+ +K
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK- 392
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + +Y L+ C +G+ D+A++L+ +ME G VTYTT+++ K A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M + + V +NV + G E ++L+ M + G+ P+ +YN L+
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M ++Y G+ G P+ T+ I C + N +A+ + ++ V
Sbjct: 513 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 572
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++ L++G K+KK EA+ + ++++
Sbjct: 573 VSSYNALIKGFYKRKKFLEARELFEQMRRE 602
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNA-LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
++ ++M G + ++N +L C ++ + +L + I + ++PD + Y L
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE--GIAPDGVIYTTL 264
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C G+ A L +EM+ + + +TYT V+ L + G EA++L+ EM K +
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+ D Y I G + L ++M GL P+ ++Y L CK +D A +
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + G N T+ + + LC +GN D+A K+ K+ + PD T L++
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444
Query: 354 KKKKIKEAKGVIR-TIKKKFPPNVL 377
K +++ A ++R + ++ P V+
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVV 469
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LFDE+ K+ +SPD I+Y ++ C +G +A +L +EM K +E VTYT +++
Sbjct: 280 LFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
K+G +EA L ++M + G+ ++ Y G+ + EL+ EM GL+ +
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ CK +D+A K+ + +E G P+A T+ T + C S +A+++ ++
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+ P T +L+ G +++ + +++ ++K PN
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNT--------YGGDPERLKELIDEMRDAGLKPDTI 273
A +L+ +M G+ + V + N+ I++ E + +LI+EM+ GLKP+
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN ++ CK + EA++V + G +P+ + T I C GN AY++F E
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
PDF T ++ GL + ++ EA + + K+ P+
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + +GM + + M E G + ++N+L+ C R+ + I K
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK- 532
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y +L+K HC + + +A L +M KG +T +Y ++ YK+ E
Sbjct: 533 -GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 591
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYN 276
A L+ +M ++G+ D YN+ Y G E EL DE + L D + N
Sbjct: 592 ARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 11/228 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ +AG D A++ M+ G +++ L+ A +SR + L ++ +
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P +++ +L+ C SG + +LL M KG+ TY +++ + N
Sbjct: 463 -ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 521
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
++ M KGV D YN+ I +KE L +M G SYN L
Sbjct: 522 TTEIYRGMCAKGVVPDGNTYNILIKGH--CKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 579
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ + K + EA++++E + G + IY++ N+D+
Sbjct: 580 IKGFYKRKKFLEARELFEQMRREGLVADRE-----IYNIFADINYDEG 622
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 10/354 (2%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
+ S +VS LR ++AL++ V SP + + + + L K ++F +
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP--NLFVYNALIDSLCKGRKFHEA 386
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
E L + + LI + + G D A+ +M + G SV +N+L+
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 142 -CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
C + + + I KK L P ++Y L+ +C G +KAL L +EM KG+
Sbjct: 447 HCKFGDISAAEGFMAEMINKK--LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
+ T+TT+L+ L++ G +A +L++EM + V + YNV I GD + E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+ EM + G+ PDT SY L+ C EAK +GL + C N + ++ C
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIKKK 371
G ++A V +E MV + D + V +L++G +K K K G+++ + +
Sbjct: 625 EGKLEEALSVCQE--MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 41/304 (13%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ Y G + A+R + +M G S+ +F LL R+ L LF+E+ +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE- 535
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV---------------------- 199
+N+ P++++Y ++++ +C+ G KA E L EM KG+
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 200 -------------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
E+ + YT +L+ ++G EEA + EM ++GVDLD+ Y V I
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 247 NTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ D + L+ EM D GLKPD + Y ++ K EA +++ + GC P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT----VKLLVEGLVKKKKIKEA 361
N T+ I LC +G ++A + + V +P+ T + +L +G V +K E
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775
Query: 362 KGVI 365
I
Sbjct: 776 HNAI 779
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 41/344 (11%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQ 96
E D KA + +++ P Y+ + L + + S+ + ++ HK + ++ +
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVP--DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
Y L+ + + G + A+ +M + G ++ + L+ + + L
Sbjct: 613 ICYT-GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ + L PD + Y ++ + +G +A + + M N+G VTYT V+N L K
Sbjct: 672 EMHDR-GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 217 GNAEEAERLWSEMEK-----------------------------------KGVDLDVAAY 241
G EAE L S+M+ KG+ + A Y
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 790
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N+ I G E ELI M G+ PD I+Y ++ C+ + +A +++ + E
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
G P+ + T I+ C +G KA ++ E + IP+ T
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 4/262 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+IRS + A M+ G +++ +N L+ C + ++++ V I D K
Sbjct: 232 GVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK 291
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+L PD ++Y L+ C + LE+++EM + ++++ L K+G E
Sbjct: 292 --DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLM 279
EA L + GV ++ YN I + G EL+ D M GL+P+ ++Y+ L+
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+ +D A + + G + + + I C G+ A E +
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
P T L+ G K KI +A
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKA 491
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + G F A +D M G + +++ A++ ++ ++ +L ++
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPV 746
Query: 162 YNLSPDKISYG----LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
++ P++++YG +L K D KA+EL N + KG+ T TY ++ +QG
Sbjct: 747 SSV-PNQVTYGCFLDILTKGEVDM---QKAVELHNAIL-KGLLANTATYNMLIRGFCRQG 801
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
EEA L + M GV D Y I D ++ EL + M + G++PD ++YN
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
L+ C M +A ++ + G PN T RT
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 35/244 (14%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
F+ L+ RSR ++F + K +L P+ + LL A+EL N+M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
+ G+ YT V+ L + + A+ + + ME G D+++ YNV
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNV----------- 267
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
LID + CK + + EA + + L P+ T+ T +
Sbjct: 268 ----LIDGL-------------------CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV 304
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFP 373
Y LC F+ ++ E + + P V LVEGL K+ KI+EA ++ R +
Sbjct: 305 YGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 374 PNVL 377
PN+
Sbjct: 365 PNLF 368
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 139/271 (51%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +A + A+ QM E+G V F L+ A R L DE+ K
Sbjct: 185 LIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV-KGS 243
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD + Y + + +G+ D A + +E++ +G++ V+YT+++ L K G EA
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 303
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E L+++ME + AYN I YG G E +L++ +R+ G P +S+N ++T
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMG-YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 362
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C K +DEA ++E ++++ PN++T+ I LC G ++AY++ E P
Sbjct: 363 CLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ TV ++V+ L K +K++EA + + ++
Sbjct: 422 NLLTVNIMVDRLCKARKLEEAYKIFESASQR 452
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 148/314 (47%), Gaps = 5/314 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R + E L + + + +I YG AG F+ A + +++ E G S
Sbjct: 294 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 353
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+SFN++L + R D+ LF+ + K + P+ +Y +++ C G ++A +L
Sbjct: 354 VVSFNSILTCLGKKRKVDEALSLFEVMKK--DAEPNSSTYNIIIDMLCLGGRVEEAYRIL 411
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+EME+ + +T +++ L K EEA +++ ++G + D Y + + G
Sbjct: 412 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY-CSLIDGLGK 470
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + L ++M DAG + + Y L+ + + ++ K+++ L GC P+ T
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 530
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T++ + +G +K +F++ +PD + +L+ GL K + +E + +K
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590
Query: 370 KKFPPNVLRAWKKV 383
++ RA+ V
Sbjct: 591 QQGFALDARAYNAV 604
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMD 124
VR LA+ + +D L++ K +P I L N+ I +G+AG D A + F ++
Sbjct: 221 VRALAREGQVADALALVDEVKGSCLEPDIV----LYNVCIDCFGKAGNVDMAWKFFHELK 276
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +S+ ++++ ++ + LF ++ + ++ P +Y ++ + +G
Sbjct: 277 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRF 335
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+ A +LL + +G + V++ ++L CL K+ +EA L+ E+ KK + + + YN+
Sbjct: 336 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNII 394
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I GG E ++DEM A L P+ ++ N ++ CK ++EA K++E + GC
Sbjct: 395 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 454
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+P+ T+ + I L G D+AY++F++
Sbjct: 455 NPDCVTYCSLIDGLGKKGQVDEAYRLFEK 483
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 6/264 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG + F+ + G V S++ L+ T++ + +F + K+ + D
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM-KQQGFALDA 598
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y ++ C SG KA E+L EM+ K V+ T TY +++ L K +EA L+ E
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ KG++L+V Y+ I G R+ E +++EM GL P+ ++N L+ K
Sbjct: 659 AKSKGIELNVVLYSSLIDGF--GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 716
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
E ++EA ++ ++E C PN T+ I LC ++KA+ +++ +P+ T
Sbjct: 717 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 776
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIK 369
++ GL K I +A + K
Sbjct: 777 TTMISGLAKVGNITDAYSLFERFK 800
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 127/260 (48%), Gaps = 4/260 (1%)
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ ++M LG + L A R+R D +L + ++ P +Y +L+ +
Sbjct: 130 KVLEEMAVLGYGLPNQACAHLAAALVRARRLDDA-VLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
++ ++ALELL +M+ G EV +TT++ L ++G +A L E++ ++ D
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248
Query: 238 VAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ YNV I + +G G+ + + E++ GLKPD +SY ++ CK + EA++++
Sbjct: 249 IVLYNVCI-DCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELF 307
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+E P A + T I +G F+ AYK+ + IP + ++ L KK
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 367
Query: 356 KKIKEAKGVIRTIKKKFPPN 375
+K+ EA + +KK PN
Sbjct: 368 RKVDEALSLFEVMKKDAEPN 387
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 55 YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFD 114
+AS + ++ V RL K+++ + + ES C+LI G+ G D
Sbjct: 416 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 475
Query: 115 HAMRTFDQMDELGTPRSVISFNALL---FACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
A R F++M + G + + + +L+ F R K+ F E+ ++ PD
Sbjct: 476 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI---FKELIRR-GCKPDLTLL 531
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+ +G +K + ++ + G +Y+ +++ L K G A E ++ M++
Sbjct: 532 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 591
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+G LD AYN + G + E+++EM++ ++P +Y ++ K + +DE
Sbjct: 592 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 651
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++E + G N + + I G D+AY + +E + P+ T L++
Sbjct: 652 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 711
Query: 351 GLVKKKKIKEAKGVIRTIKK-KFPPN 375
LVK ++I EA +++K+ K PPN
Sbjct: 712 ALVKAEEINEALVCFQSMKEMKCPPN 737
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 140/348 (40%), Gaps = 36/348 (10%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V YA + + + RF D L+E + I +++ G+ D A+
Sbjct: 316 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 375
Query: 119 TFDQMDELGTPRSVISFNALL-FACTRSRLYDK------------------VPILFDEIP 159
F+ M + P S ++N ++ C R+ + V I+ D +
Sbjct: 376 LFEVMKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 434
Query: 160 KKYNL---------------SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
K L +PD ++Y L+ G D+A L +M + G V
Sbjct: 435 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 494
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM 263
YT+++ + G E+ +++ E+ ++G D+ N + + G+ E+ + + +++
Sbjct: 495 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 554
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
R G PD SY+ L+ K E ++ +++ G + +A + + C SG
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 614
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
KAY++ +E P T +V+GL K ++ EA + K K
Sbjct: 615 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK 662
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 131/307 (42%), Gaps = 40/307 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG F M + G ++NA++ +S K + +E+ +K
Sbjct: 569 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK- 627
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +YG ++ D+A L E ++KG+E+ V Y+++++ K G +EA
Sbjct: 628 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 687
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--------ERLKEL--------------- 259
+ EM KKG+ +V +N + + + +KE+
Sbjct: 688 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 747
Query: 260 -------------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+M+ GL P+ ++Y +++ K + +A ++E + NG P+
Sbjct: 748 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 807
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK---G 363
A +F I + + +AY+VF+E+ + + + L++ L K + +++A
Sbjct: 808 AASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGA 867
Query: 364 VIRTIKK 370
V+R I K
Sbjct: 868 VLREIAK 874
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 37/320 (11%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
SD ++E I E ++ + G A R FD+M G +++
Sbjct: 342 ISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTT 401
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
++ R+ ++ L E+ + L D+++Y +L+ +C G +A ++ N M +
Sbjct: 402 MINGLCRAVELEEAEKLLQEMWAR-RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQR 460
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN---------- 247
GV VTYT + + L KQG+ + A L EM KG++L+ YN I
Sbjct: 461 GVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQA 520
Query: 248 -----------------TY---------GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
TY GD +R L+ EM D G+KP ++YN LM
Sbjct: 521 MRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNG 580
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C + ++ KK+ + + E PNA T+ + + C N +++K P+
Sbjct: 581 FCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPN 640
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
NT +L++G K + +KEA
Sbjct: 641 ENTYNILIKGHCKARNMKEA 660
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
I+ P CN + S D A+ F ++ ++V S+N LL A C R+ D
Sbjct: 228 ISPSPEACNAVLSRLP---LDEAIELFQELPH----KNVCSYNILLKALCDAGRVKDARQ 280
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LFDE+ +PD ++YG+L+ HC G + A++LL+EM GVE YT+V+
Sbjct: 281 -LFDEMAS----APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVAL 335
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPD 271
L +G +A R+ +M ++ V LD A Y ++ GD + DEM+ GL D
Sbjct: 336 LCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 395
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++Y ++ C+ ++EA+K+ + + + T+ I C G +A+++
Sbjct: 396 GVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHN 455
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V P+ T L +GL K+ ++ A ++ + K
Sbjct: 456 AMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G A + + M + G +V+++ AL + L E+ K
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK- 495
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + +Y L+ C +G ++A+ + +M+ ++ TYTT+++ L K G+ + A
Sbjct: 496 GLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRA 555
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM KG+ + YNV + G E K+L+D M + + P+ +YN LM
Sbjct: 556 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ 615
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M ++Y+G+ PN T+ I C + N +A E +
Sbjct: 616 YCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLT 675
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ L+ L KKKK EA+ + ++K+
Sbjct: 676 ATSYSALIRLLNKKKKFVEARELFHDMRKE 705
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +AG + AMRT MD V ++ L+ A +S D+ L E+ K
Sbjct: 506 SLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDK 565
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P ++Y +L+ C SG + +LL+ M K + TY +++ + N +
Sbjct: 566 -GIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKS 624
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
++ M + V + YN+ I +KE + DEM G + SY+ L
Sbjct: 625 TTEIYKGMRSRDVGPNENTYNILIKGHCKA--RNMKEALYFHDEMIQKGFRLTATSYSAL 682
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ K + EA++++ + + G + + + +I
Sbjct: 683 IRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 10/352 (2%)
Query: 32 KSKLRSEFDPDKALDI---YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
KS LR D + D + +SK P S Y + + L+KS R D L+E
Sbjct: 14 KSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTY--NTMINGLSKSDRLDDAIRLLEEM 70
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
++ ++ + +A ++A+ +QM G P V+S+ ++ +
Sbjct: 71 VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D+ + D++ ++ P+ I+YG L+ C G D A+EL+ +M +G +TY
Sbjct: 131 DEACRVMDKMIQR-GCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNN 189
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKG-VDLDVAAYNVRITNTY-GGDPERLKELIDEMRDA 266
+++ L + A +L+ EME+ G DV Y+ + + G + L++ M
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G P+ ++Y+ L+ CK +DEA + + + +GCSPN T+ T I C G D+A
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
Y + +E V P+ T +L++ K K ++A G++ ++K + PN+
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 11/286 (3%)
Query: 94 ITQEPYLCNLIRSYGQAGMF------DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSR 146
+ ++ Y+ NL MF + A + M + G +V+S+N ++ C ++
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+++ V +L E N PD +++ ++ + C + D A EL N ++ G VTY
Sbjct: 411 VHEGVLLL--EQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 468
Query: 207 TTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMR 264
++++ L K ++AE L EM K+G D+ YN I +R +L +M
Sbjct: 469 NSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQML 528
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
GL PD ++Y+ +++ CK MDEA V E + +NG P A T+ T I C +GN D
Sbjct: 529 SDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLD 588
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
KA ++ + + PD T + ++ L K+ ++++A ++ T+ +
Sbjct: 589 KALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLR 634
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 1/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G D A+ +M E G + I++N ++ R D LF E+ +
Sbjct: 155 LVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESG 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++ S SG D A L+ M +KG VTY+++L+ L K G +EA
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M + G ++ YN I + G + L++EM D G +P+ ++Y L+
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK ++A + E + E G PN T+ + + C ++A ++ + +P+
Sbjct: 335 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPN 394
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+ ++ GL K K+ E
Sbjct: 395 VVSYNTVIAGLCKATKVHEG 414
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 161/375 (42%), Gaps = 42/375 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL ++ + + + P + V L KS + D L+E+ +
Sbjct: 201 DSALQLFKEMEESGSCP-PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L+ +AG D A +M G +++++N ++ C R+ D+ L +E+
Sbjct: 260 SLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRI-DEAYHLLEEMVD 318
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P+ ++Y +LL + C G ++ A+ L+ M KG TY ++L+ K+ E
Sbjct: 319 G-GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVE 377
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI--------------------TNTYGGDPERLKELI 260
A +L S M +KG +V +YN I +N D +I
Sbjct: 378 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTII 437
Query: 261 DEM----------------RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLEENGC 303
D M +++G P+ ++YN L+ CK+ D+A+ + E + GC
Sbjct: 438 DAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGC 497
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
SP+ T+ T I LC S D+AYK+F + + PD T +++ L K + + EA
Sbjct: 498 SPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANN 557
Query: 364 VIR-TIKKKFPPNVL 377
V+ +K F P +
Sbjct: 558 VLELMLKNGFDPGAI 572
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 4/279 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N++ D A++ F +M+E G+ P V +++ ++ + +S D L + +
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS 248
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K SP+ ++Y LL C +G D+A LL M G VTY T+++ K G +
Sbjct: 249 K-GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 307
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L EM G +V Y V + G E L++ M + G P+ +YN L+
Sbjct: 308 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+CK + ++ A ++ + + GC PN ++ T I LC + + + ++ + + +
Sbjct: 368 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCV 427
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD T +++ + K ++ A + I++ PN++
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A R D+M + G +VI++ L+ R D L ++ ++ P+ I+Y
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER-GYRPNAITYNN 189
Query: 174 LLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
++ C D AL+L EME G TY+T+++ L K G ++A RL M K
Sbjct: 190 IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK 249
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G +V Y+ + G + L+ M +G P+ ++YN ++ +CK +DEA
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLV 349
+ E + + GC PN T+ + C G + A + + VMV K +P+ T L+
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE--VMVEKGYVPNLFTYNSLL 367
Query: 350 EGLVKKKKIKEAKGVIRT-IKKKFPPNVLRAWKKVEEELGLVPAPAVGDG 398
+ KK +++ A ++ + I+K PNV+ + GL A V +G
Sbjct: 368 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA---GLCKATKVHEG 414
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 38/312 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A + SS+ + P Y + + L K+ + + L+E ++ +
Sbjct: 377 ERACQLLSSMIQKGCVPNVVSY--NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFN 434
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + + D A F+ + E G +++++N+L+ +SR +D+ L E+ +K
Sbjct: 435 TIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD I+Y ++ C S D+A +L +M + G+ VTY+ V++ L K +E
Sbjct: 495 QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDE 554
Query: 222 AERLWSEMEKKGVD------------------LDVAAYNVRITNTYGGDPE--------- 254
A + M K G D LD A +++ + G P+
Sbjct: 555 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 614
Query: 255 ------RLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
RL+ EL++ M AGL PDT++YN L+ +C ++A ++E + + GC P
Sbjct: 615 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEP 674
Query: 306 NATTFRTWIYHL 317
+ T+ T + HL
Sbjct: 675 DNATYTTLVGHL 686
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 159/329 (48%), Gaps = 5/329 (1%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE-TLIESHKNDPKITQEP 98
+P KAL+I++SV K + + + + +L F +E L E+ N E
Sbjct: 19 NPLKALEIFNSVKKEDGFKHTLLTYKGM-IEKLGFHGEFEAMEEVLAETRMNIDNGLLEG 77
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+R+YG+ G A+ F++MD SV S+NA++ R +D+ ++ +
Sbjct: 78 VYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRM 137
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + PD ++ + +KS C + A LLN M ++G E + V Y TV+ Y++ +
Sbjct: 138 RDK-GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENH 196
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
EA L+ EM G+ D+ A+N I T G + + L++++ G+ P+ + N
Sbjct: 197 RVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNI 256
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+ +C+ M++EA ++ +G+ G +P+ T+ T I LC + +A ++ V
Sbjct: 257 FIQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T +++G K ++ A ++R
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILR 344
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 44/319 (13%)
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
LCN L++ Q G+ A++ ++M E G + ++N ++ C + D ++ D
Sbjct: 392 LCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDA 451
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
I K + PD ++ L+ +C D A+E+++ M N GV +TY ++LN L K G
Sbjct: 452 IAKGH--LPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISY 275
E+ + M +KG ++ YN+ +T ++ E LI+EM++ GL PD +++
Sbjct: 510 KYEDVMGTFKLMMEKGCVPNIITYNI-LTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568
Query: 276 NFLMTCYCKNE------------------------------------MMDEAKKVYEGLE 299
LM +C N M+ A+K++ +
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
ENG SP++ T+R I C +GN + Y + IP T ++ L K+++
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688
Query: 360 EAKGVIR-TIKKKFPPNVL 377
EA G+I + K P V+
Sbjct: 689 EAVGIIHLMVHKGIVPEVV 707
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 9/287 (3%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
IT +C L +++ + +H +R +M G ++N+++ C + +
Sbjct: 286 ITYNTLICGLCKNF-KVVEAEHYLR---KMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQ 341
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D K + PD+ +Y L+ C G D+A+ + NE KG++ V T++
Sbjct: 342 ILRDGAFKGF--VPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPD 271
L +QG +A +L +EM + G D+ YN+ I G L+ + G PD
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPD 459
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++N L+ YCK +D A ++ + + +G SP+ T+ + + LC +G ++ FK
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ +P+ T +L E K +K++EA +I ++ K P+V+
Sbjct: 520 LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 18/279 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVI----SFNALLFACTRSRLYDKVPILFDEI 158
+I Y + GM +A DQ+ G + + ++ +L+ + D+ +F+E
Sbjct: 326 IIDGYCKLGMMQNA----DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+K L P+ + L+K G +AL+L+NEM G TY V+N L K G
Sbjct: 382 MEK-GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGC 440
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTI 273
+A+ L + KG DV +N I G ++LK E++D M + G+ PD I
Sbjct: 441 VSDADNLVIDAIAKGHLPDVFTFNTLID----GYCKKLKLDNAIEIVDRMWNHGVSPDVI 496
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN ++ CK ++ ++ + E GC PN T+ C + ++A + +E
Sbjct: 497 TYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEM 556
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
PD L++G + A + + + +++
Sbjct: 557 QNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/168 (20%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYN----VRITNTYGGDPERLKELIDEMRDAGLKP 270
++G +EA ++ M+ + V +YN + + Y ++ ++ MRD G+ P
Sbjct: 88 RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRY---FDQAHKVYMRMRDKGIVP 144
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++ M +C+ A+++ + GC +A + T I + +A+++F
Sbjct: 145 DVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELF 204
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+E + + PD L+ L +K ++E++ ++ + +K+ PN+
Sbjct: 205 EEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLF 252
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ K+++ + LIE +N L++ + G D A + F ++DE
Sbjct: 534 NILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDE 593
Query: 126 -LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
++ ++N ++ A + LF+++ + SPD +Y +++ C +G+
Sbjct: 594 QYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCEN-GFSPDSYTYRVMIDGFCKTGNI 652
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ L KG+ + T+ VLNCL + EA + M KG+
Sbjct: 653 NSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGI 702
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 171/351 (48%), Gaps = 5/351 (1%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
T ++++ + + E D D A ++ +S+ + +P + Y + ++ L + R+ D+
Sbjct: 219 TPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNY--NTVLKGLRTAGRWEDV 276
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
E LI ++ E L +I S Q G+F A+R ++M + +++++NA++
Sbjct: 277 EELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSG 336
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
D L + + P+ +Y +L+K C++ + A +L+ +M
Sbjct: 337 LCEQGHVDGALYLLSNM-QTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLP 395
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
+T+ T++ L ++G +A ++ +M +KG + Y+ I G E+ EL+
Sbjct: 396 DILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELL 455
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+EM G P+ I+Y+ L C + + + EA ++ L++ G SP A + T + LC +
Sbjct: 456 NEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRN 514
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G D+A + V +PD +T +L++GL + +KEA+ ++ T+ +
Sbjct: 515 GKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR 565
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 142/304 (46%), Gaps = 10/304 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
VR L + R +D ++E+ + L + Y + G D A R D M L
Sbjct: 95 VRDLCRRGRPADAARVVEACGSAATAVTYSALAD---GYCRVGRLDEARRVVDGMPVL-- 149
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
S ++N L+ A C R ++ D + +L D + + +PD ++Y +LL++ C +A
Sbjct: 150 -PSAYAYNPLMHALCVRGQVRDAL-VLLDNMLYR-GCAPDVVTYNILLEAACKGRGYRQA 206
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+EL++ M +G T VTY +++ + ++G+ + A L + + G + YN +
Sbjct: 207 MELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKG 266
Query: 248 T-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E ++ELI EM P + + +++ C+ + A ++ E + ++ C+ N
Sbjct: 267 LRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTAN 326
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ + LC G+ D A + P+ T +LV+GL ++ ++A+ ++
Sbjct: 327 IVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMA 386
Query: 367 TIKK 370
+ +
Sbjct: 387 KMSQ 390
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 145/346 (41%), Gaps = 49/346 (14%)
Query: 69 VRRLAKSKRFSD-IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V RL +++R D + L ++ +P L+ + G A+ D M G
Sbjct: 133 VGRLDEARRVVDGMPVLPSAYAYNP----------LMHALCVRGQVRDALVLLDNMLYRG 182
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
V+++N LL A + R Y + L D + + +P ++Y +++ C G D A
Sbjct: 183 CAPDVVTYNILLEAACKGRGYRQAMELID-LMRVEGCTPTNVTYNVIMDGMCREGDVDYA 241
Query: 188 LELLNEMENKGVEVTTVTYTTVL----------------------NC------------- 212
ELLN + + G TV Y TVL NC
Sbjct: 242 RELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISS 301
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L ++G + A RL +M K ++ YN ++ G + L+ M+ G KP+
Sbjct: 302 LCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPN 361
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+YN L+ C E ++A+ + + + C P+ TF T I LC G +A +VFK
Sbjct: 362 IFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFK 421
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
+ P+ T ++EGL K K++++ ++ + K F P +
Sbjct: 422 QMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI 467
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 39/238 (16%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER- 224
PD L++ C G A ++ E G T VTY+ + + + G +EA R
Sbjct: 86 PDVALANRLVRDLCRRGRPADAARVV---EACGSAATAVTYSALADGYCRVGRLDEARRV 142
Query: 225 -------------------------------LWSEMEKKGVDLDVAAYNVRITNTYGGDP 253
L M +G DV YN+ + G
Sbjct: 143 VDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRG 202
Query: 254 ER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
R ELID MR G P ++YN +M C+ +D A+++ L GC+PN + T
Sbjct: 203 YRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNT 262
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ L +G ++ ++ E + P T+ +++ L ++ + A IR ++K
Sbjct: 263 VLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRA---IRLLEK 317
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
TA+ ++ + S L + D AL + S++ P + + ++ V+ L ++R+ D
Sbjct: 324 TANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKP--NIFTYNILVKGLCNAERWEDA 381
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
E L+ + +I Q G+ A+ F QM E G + +++++++
Sbjct: 382 EDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEG 441
Query: 142 CTRSRLYDKVPILFDEIPKK-------YNL--------------------------SPDK 168
++ ++ L +E+ K Y+L SP
Sbjct: 442 LAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQA 501
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+ Y +L C +G +D+A+++L+ M + G TY+ ++ L +G +EA L S
Sbjct: 502 VLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLST 561
Query: 229 MEKKGVDLD 237
+ + V +D
Sbjct: 562 LSSRDVIVD 570
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 126/261 (48%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
++RS G + A + M G SV++FN L+ F C + L + IL +++PK
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDIL-EKMPK- 372
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +SY LL C D+A+E L M ++G VTY T+L L K G E+
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +++ KG + YN I G + +L+DEMR LKPDTI+Y+ L+
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +DEA K + E G PNA TF + + LC + D+A + P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKP 552
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+EGL + KEA
Sbjct: 553 TETSYTILIEGLAYEGMAKEA 573
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++RS +G AM D+M + VI++ L+ A R + L DE+ +
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM-RDR 268
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y +L+ C G D+A++ LN+M + G + +T+ +L + G +A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L ++M +KG V +N+ I G R +++++M G +P+++SYN L+
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHG 388
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK + MD A + E + GC P+ T+ T + LC G + A ++ + P
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T +++GL K K +A ++ ++ K
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 160/332 (48%), Gaps = 12/332 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R+ K+++ + I ++E P + + I Y +AG ++A+ D+M
Sbjct: 149 RMGKTRKAAKILEVLEGSGAVPDVITYNVM---ISGYCKAGEINNALSVLDRMS---VSP 202
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V+++N +L + C +L + +L D + ++ + PD I+Y +L+++ C +A++
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVL-DRMLQR-DCYPDVITYTILIEATCRDSGVGQAMK 260
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL+EM ++G VTY ++N + K+G +EA + ++M G +V +N+ + +
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 250 G-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G ++L+ +M G P +++N L+ C+ ++ A + E + ++GC PN+
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
++ ++ C D+A + + V PD T ++ L K K+++A ++ +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 369 KKKFPPNVLRAWKKVEEELGLVPAPAVGDGQK 400
K VL + V + GL A G K
Sbjct: 441 SSKGCSPVLITYNTVID--GLAKAGKTGKAIK 470
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 10/280 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
N +R + G + + + M G +I L+ C + IL E+ +
Sbjct: 107 NHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKIL--EVLE 164
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD I+Y +++ +C +G + AL +L+ M V VTY T+L L G +
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A + M ++ DV Y + I T G + +K L+DEMRD G PD ++YN L
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMK-LLDEMRDRGCTPDVVTYNVL 280
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +DEA K + +GC PN T + +C +G + A K+ + +
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
P T +L+ L +K + A ++ + K PN L
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSL 380
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 34/225 (15%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLT--------------VRRLAKSKRFSDI---ETLI 85
+A+DI + KH P S Y L + R+ + DI T++
Sbjct: 362 RAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTML 421
Query: 86 ESHKNDPKITQEPYLCNLIRSYG----------------QAGMFDHAMRTFDQMDELGTP 129
+ D K+ + N + S G +AG A++ D+M
Sbjct: 422 TALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLK 481
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
I++++L+ +R D+ F E ++ + P+ +++ ++ C + +D+A++
Sbjct: 482 PDTITYSSLVGGLSREGKVDEAIKFFHEF-ERMGVRPNAVTFNSIMLGLCKTRQTDRAID 540
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L M N+G + T +YT ++ L +G A+EA L +E+ KG+
Sbjct: 541 FLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 35/294 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE----- 157
LI Y + GM A+ D+M E G V+++N +L + +L LFDE
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 158 -----------------------------IPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
I + N+ PD ++Y +L+ C + +KA
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKAN 485
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
EL NEM ++ + ++Y ++N G EA RLW EM +KG+ + N I
Sbjct: 486 ELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGY 545
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
GD + E + +M G+ PD+I+YN L+ + K E MD+A + +E G P+
Sbjct: 546 CRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDV 605
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ + C G +A + ++ + PD +T L+ G V + +KEA
Sbjct: 606 VTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEA 659
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 160/337 (47%), Gaps = 7/337 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A ++Y+ +++ + + Y ++ V L K + D++ + +
Sbjct: 167 DLAWEVYNEIAR--SGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYN 224
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI +Y + G+ A + M G ++ ++NA++ + Y + +F+E+
Sbjct: 225 TLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS- 283
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSPD +Y LL C + + +A ++ ++M ++GV +++++++ + G+ ++
Sbjct: 284 IGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQ 343
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + +M+ G+ D Y + I N Y G E+ D+M + G D ++YN ++
Sbjct: 344 ALMYFRDMKTSGLVPDNVIYTILI-NGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTIL 402
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +++ +A +++ + E G P+ TF T I+ C GN KA +F +
Sbjct: 403 NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK 462
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
PD T +L++G K ++++A + I +K PN
Sbjct: 463 PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A + + L K K +D L + + LI + + G A+ F M
Sbjct: 397 AYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIM 456
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+ ++++N L+ ++ +K L++E+ + + P+ ISY +L+ +C+ G
Sbjct: 457 TQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR-KIFPNHISYAILVNGYCNLGF 515
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+A L +EM KG++ T VT TV+ + G+ +A+ +M +GV D YN
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575
Query: 244 RITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I G+ ++ LI++M GL+PD ++YN ++ +C+ M EA+ + + E G
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
P+ +T+ T I N +A++ E + +PD
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 139/313 (44%), Gaps = 20/313 (6%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL---------CN--------LIRSYGQ 109
L +RR+ +SKR SD +TLI +++ + C LIRSY Q
Sbjct: 69 LNLRRV-RSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQ 127
Query: 110 AGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI 169
A + TF + G S+ + N+LL + D +++EI + + +
Sbjct: 128 ARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARS-GIELNVY 186
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+ +++ + C D L +ME KG+ VTY T++N ++G EA + + M
Sbjct: 187 TLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSM 246
Query: 230 EKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
KG+ + YN I G R K + +EM GL PDT +YN L+ C+N
Sbjct: 247 SGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNF 306
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
EAK ++ + G SP+ +F + I +G+ D+A F++ +PD +L
Sbjct: 307 LEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTIL 366
Query: 349 VEGLVKKKKIKEA 361
+ G + + EA
Sbjct: 367 INGYCRNGMMSEA 379
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 133/302 (44%), Gaps = 38/302 (12%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
F A F M G +ISF++L+ +R+ D+ + F ++ K L PD + Y
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDM-KTSGLVPDNVIYT 364
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--------------------- 211
+L+ +C +G +ALE+ ++M +G + V Y T+LN
Sbjct: 365 ILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVER 424
Query: 212 ------CLY--------KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERL 256
C + K+GN +A L+ M +K + D+ YN+ I + E+
Sbjct: 425 GVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKA 484
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
EL +EM + P+ ISY L+ YC + EA ++++ + G P T T I
Sbjct: 485 NELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKG 544
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
C SG+ KA + + + PD T L+ G VK + + +A +I ++ K P+
Sbjct: 545 YCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPD 604
Query: 376 VL 377
V+
Sbjct: 605 VV 606
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 3/230 (1%)
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ R +V I+ I D + + LL++S+ + ++ + +
Sbjct: 84 TLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRR 143
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--E 254
KG V+ ++L L K G + A +++E+ + G++L+V N+ + N D +
Sbjct: 144 KGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMV-NALCKDHKID 202
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+K + +M G+ D ++YN L+ YC+ ++ EA +V + G P T+ I
Sbjct: 203 DVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVI 262
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
LC G + +A VF E + + PD T L+ + EAK +
Sbjct: 263 NGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDI 312
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 151/337 (44%), Gaps = 41/337 (12%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + L K+ + ++ E ++ ++ LI + + G A R FD+
Sbjct: 324 YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 383
Query: 123 MDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD- 180
M + I++ A++ C R+ + + + + K+ L PD+++Y L+ +C
Sbjct: 384 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR--LEPDEVTYTALIDGYCKE 441
Query: 181 ----------------------------------SGSSDKALELLNEMENKGVEVTTVTY 206
G D A ELL+EM KG+E+ TY
Sbjct: 442 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 501
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMR 264
+++N L K GN ++A +L +ME G D Y + + Y E R EL+ +M
Sbjct: 502 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT-LMDAYCKSREMVRAHELLRQML 560
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
D L+P +++N LM +C + M+++ +K+ + + E G PNATT+ + I C N
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 620
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
++++ +PD NT +L++G K + +KEA
Sbjct: 621 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 657
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 148/305 (48%), Gaps = 16/305 (5%)
Query: 81 IETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+E LI ++K+ DP++ + +AGM D A + FD+M G SV S N
Sbjct: 168 VEQLIYTYKDWGSDPRVFD-----IFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCN- 221
Query: 138 LLFACTRSRLYDKVPI---LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
LF S D + I +F E P+ + + SY ++ S C G +A +LL +M
Sbjct: 222 -LFISHLSEDLDGIKIALKVFVEFPE-VGVCWNTASYNIITHSLCQLGRVVEAHQLLLQM 279
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNTYGGDP 253
E +G ++Y+TV+N + G + +L EM+ KG+ + YN V + G
Sbjct: 280 ELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKV 339
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+ ++ EM G+ PD + Y L+ +CK + A ++++ +++ SP+ T+
Sbjct: 340 AEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAV 399
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKF 372
I LC +G +A K+F E V PD T L++G K+ K+KEA + + ++
Sbjct: 400 ICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459
Query: 373 PPNVL 377
PN++
Sbjct: 460 TPNIV 464
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 129/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA-LLFACTRSRLYDKVPILFDEIPKK 161
+I Y Q G ++ ++M G + ++N +L C ++ + +L + I +
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE- 352
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD + Y L+ C G+ A L +EM+ + + +TYT V+ L + G E
Sbjct: 353 -GIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME 411
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++L+ EM K ++ D Y I G + L ++M GL P+ ++Y L
Sbjct: 412 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D A ++ + G N T+ + + LC +GN D+A K+ K+ + P
Sbjct: 472 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 531
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
D T L++ K +++ A ++R + ++ P V+
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 569
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G A +QM ++G +++++ AL + D L E+ +K
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK- 492
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + +Y L+ C +G+ D+A++L+ +ME G VTYTT+++ K A
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 552
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M + + V +NV + G E ++L+ M + G+ P+ +YN L+
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M ++Y G+ G P+ T+ I C + N +A+ + ++ V
Sbjct: 613 YCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLT 672
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++ L++G K+KK EA+ + ++++
Sbjct: 673 VSSYNALIKGFYKRKKFLEARELFEQMRRE 702
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 116/224 (51%), Gaps = 3/224 (1%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LFDE+ K+ +SPD I+Y ++ C +G +A +L +EM K +E VTYT +++
Sbjct: 380 LFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
K+G +EA L ++M + G+ ++ Y G+ + EL+ EM GL+ +
Sbjct: 439 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 498
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ CK +D+A K+ + +E G P+A T+ T + C S +A+++ ++
Sbjct: 499 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 558
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+ P T +L+ G +++ + +++ ++K PN
Sbjct: 559 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + +GM + + M E G + ++N+L+ C R+ + I K
Sbjct: 574 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK- 632
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y +L+K HC + + +A L +M KG +T +Y ++ YK+ E
Sbjct: 633 -GVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLE 691
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYN 276
A L+ +M ++G+ D YN+ Y G E EL DE + L D + N
Sbjct: 692 ARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 11/228 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ +AG D A++ M+ G +++ L+ A +SR + L ++ +
Sbjct: 503 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 562
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P +++ +L+ C SG + +LL M KG+ TY +++ + N
Sbjct: 563 -ELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 621
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
++ M KGV D YN+ I +KE L +M G SYN L
Sbjct: 622 TTEIYRGMCAKGVVPDGNTYNILIKGH--CKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 679
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ + K + EA++++E + G + IY++ N+D+
Sbjct: 680 IKGFYKRKKFLEARELFEQMRREGLVADRE-----IYNIFADINYDEG 722
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 143/283 (50%), Gaps = 16/283 (5%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC + + AG+ +M+E G +V++++ ++ + + R ++ +F +
Sbjct: 213 LCKIGETAAAAGLLK-------KMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK 265
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +SPD +Y L++ C+ +A LLNEM + + VT+ +++ + K+G
Sbjct: 266 VK-GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISY 275
EA+ + M + GV+ DV Y+ + YG + ++L D M G KPD SY
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYS---SLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ YCK + +DEAK+++ + G +PN ++ T I+ LC G+ +A +FK
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNVL 377
+P+ T +L++G K+ +A + R ++ + PN++
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLV 484
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 139/296 (46%), Gaps = 24/296 (8%)
Query: 83 TLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC 142
T+I+SH+ D ++ + A+ F M G + ++N+L+
Sbjct: 243 TIIDSHRKDRRVNE-------------------ALDIFSYMKVKGISPDIFTYNSLIQGL 283
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
+ + L +E+ + N+ PD +++ +L+ + C G +A +L M GVE
Sbjct: 284 CNFSQWKEASALLNEM-RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPD 342
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELI 260
VTY++++ + EA +L+ M KG DV +YN+ I N Y + K+L
Sbjct: 343 VVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILI-NGYCKVKRIDEAKQLF 401
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+EM GL P+ +SYN L+ C+ + EA+ +++ + NG PN T+ + C
Sbjct: 402 NEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQ 461
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPN 375
G F KA+++F+ + P+ +L++ + K +++A+ + + K PN
Sbjct: 462 GYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPN 517
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + D A ++ +LG ++++F L+ + + + LFD++ +
Sbjct: 139 LINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR- 197
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y ++ C G + A LL +ME G + VTY+T+++ K EA
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++S M+ KG+ D+ YN I + L++EMR + PD +++N L+
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA+ V + + E G P+ T+ + +Y +A K+F + PD
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+ +L+ G K K+I EAK + I + PN
Sbjct: 378 VFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPN 412
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 6/206 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + FD M G V S+N L+ + + D+ LF+E+ + L+P+ +SY L+
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQ-GLTPNNVSYNTLI 420
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C GS +A L M G TY+ +L+ KQG +A RL+ M+
Sbjct: 421 HGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSK 480
Query: 236 LDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++ YN+ I G+ ++L E+ GL+P+ Y ++ CK ++DEA +
Sbjct: 481 PNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEA 540
Query: 295 YEGLEENGCSPNATTF----RTWIYH 316
+ +EE+GC P+ ++ R +++H
Sbjct: 541 FRNMEEDGCPPDEISYNVIIRGFLHH 566
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 2/211 (0%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
++ ++ + K KR + + L + LI Q G A F
Sbjct: 379 FSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKN 438
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++ +++ LL + + K LF + Y+ P+ + Y +L+ + C SG
Sbjct: 439 MHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS-KPNLVMYNILIDAMCKSG 497
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ A +L +E+ KG++ YTT++N L K+G +EA + ME+ G D +YN
Sbjct: 498 NLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYN 557
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
V I + D R +LI EMRD G D
Sbjct: 558 VIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 71/291 (24%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A+ +F+ M +I F LL A + + YD V L ++ + LSP+ +
Sbjct: 79 DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQM-ELAGLSPNIYTLS 137
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ D A +L ++ G++ T VT+TT++N L K G +A
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQA---------- 187
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
EL D+M G +PD +Y ++ CK A
Sbjct: 188 ------------------------MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAA 223
Query: 293 KVYEGLEENGCSPNATTFRT-----------------------------------WIYHL 317
+ + +EE GC PN T+ T I L
Sbjct: 224 GLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGL 283
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
C + +A + E ++ +PD T +LV+ + K+ K+ EA+GV++T+
Sbjct: 284 CNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 4/193 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A + F++M G + +S+N L+ + + LF +
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL P+ +Y +LL C G KA L M++ + V Y +++ + K GN +A
Sbjct: 444 NL-PNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDA 502
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+SE+ KG+ + Y I G + E M + G PD ISYN ++
Sbjct: 503 RKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRG 562
Query: 282 YCKNEMMDEAKKV 294
+ ++ DE++ V
Sbjct: 563 FLHHK--DESRAV 573
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L +M AGL P+ + + L+ C+ + +D A V + + G P TF T I LC
Sbjct: 120 LTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLC 179
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
G F +A ++F + V PD T ++ GL K + A G+++ +++ PNV+
Sbjct: 180 KVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV 239
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA-EEAERLWSEMEKKGVDLD 237
C + D AL N M ++ + +T +L+ + K G + L +ME G+ +
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132
Query: 238 VAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ Y + I +R+ ++ ++ GL+P +++ L+ CK +A ++
Sbjct: 133 I--YTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + GC P+ T+ T I LC G A + K+ P+ T +++ K
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250
Query: 355 KKKIKEAKGVIRTIK-KKFPPNVL 377
+++ EA + +K K P++
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIF 274
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G +A+ D+M V+++ LL A + Y + L DE+ K
Sbjct: 164 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDK- 222
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y +++ C G D A+E L + + G E TV+Y VL L E+A
Sbjct: 223 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 282
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM +KG +V +N+ I+ G E E+++++ G P+++SYN L+
Sbjct: 283 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 342
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---FKESVMVHK 338
+CK + MD+A + + GC P+ ++ T + LC SG D A ++ K+
Sbjct: 343 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 402
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ +NTV ++GL K K KEA ++ + K P+++
Sbjct: 403 LISYNTV---IDGLTKAGKTKEALELLNEMVSKGLQPDII 439
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 24/330 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ ++ + P + Y ++ ++ L ++R+ D E L+
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSY--NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G+ + A+ +Q+ + G + +S+N LL A + + DK D + +
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 362
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +SY LL + C SG D A+ELL+++++KG ++Y TV++ L K G +E
Sbjct: 363 -GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 421
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
A L +EM KG+ D+ Y+ D R+++ I +++D G++P+T+ YN +
Sbjct: 422 ALELLNEMVSKGLQPDIITYSTIAAGLCRED--RIEDAIRAFGKVQDMGIRPNTVLYNAI 479
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK A ++ + NGC PN +T+ I L G +A + E
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE------ 533
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
L G+V+K I KG IR +
Sbjct: 534 --------LCSRGVVRKSLIN--KGAIRLL 553
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 138/287 (48%), Gaps = 7/287 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ Y AG D A R +M ++N L+ C R R + + +L DE+ ++
Sbjct: 132 MVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVL-DEMLRR 187
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++Y +LL++ C +A++LL+EM +KG VTY V+N + ++G ++
Sbjct: 188 -RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 246
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A + G + + +YN+ + + E +EL+ EM G P+ +++N L++
Sbjct: 247 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 306
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ +++ A +V E + + GC+PN+ ++ ++ C DKA V P
Sbjct: 307 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 366
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
D + L+ L + ++ A ++ +K K VL ++ V + L
Sbjct: 367 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 7/216 (3%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
PD ++Y ++ +C +G D A L+ EM VE TY T++ L +G A
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA 179
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ EM ++ DV Y + + T G + +K L+DEMRD G PD ++YN ++
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK-LLDEMRDKGCTPDIVTYNVVVNGI 238
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ +D+A + + L GC PN ++ + LC + ++ A ++ E P+
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
T +L+ L +K ++ A V+ I K PN L
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC+ RS QA H M D G P V+S+ ++ R DK LFDE+
Sbjct: 177 LCDENRSQ-QALHLLHTMMADDTRG--GCPPDVVSYTTVINGLLREGQLDKAYCLFDEML 233
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ +SP+ I+Y LL +C SG +A+ + +M GVE VTY T++ L K G +
Sbjct: 234 DQ-GMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRS 292
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
EA +++ M KKG D + Y + + Y G ++ +L+D M G +PD +N
Sbjct: 293 MEARKVFDSMVKKGHKPDSSIYGT-LLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNI 351
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ Y K+ M+DEA + + + G PN T+ T + LC G D A F +
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
P+ + L+ GL K +A+ + + I + PN +
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTI 452
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 8/282 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I +AG D A ++ G I+F+ LL C R D + I +P
Sbjct: 102 VIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPA- 160
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM----ENKGVEVTTVTYTTVLNCLYKQG 217
+P+ SY +LLK CD S +AL LL+ M G V+YTTV+N L ++G
Sbjct: 161 LGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREG 220
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
++A L+ EM +G+ + YN + G P+ + +M G++PD ++YN
Sbjct: 221 QLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYN 280
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM CKN EA+KV++ + + G P+++ + T ++ G + +++ V
Sbjct: 281 TLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN 340
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD +L+ K + EA ++++ PN++
Sbjct: 341 GTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIV 382
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 14/328 (4%)
Query: 41 PDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-----HKNDPKIT 95
P +A+ I+ + + P Y + + L K+ R + + +S HK D I
Sbjct: 257 PKEAIGIFRKMCRDGVEPDVVTY--NTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIY 314
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
L+ Y G + D M GT FN L+ A + + D+ + F
Sbjct: 315 G-----TLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAF 369
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
++ ++ L P+ ++YG ++ + C G D A+ + + ++G+ V + T+++ L
Sbjct: 370 SKM-RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCA 428
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTIS 274
++AE L EM +G+ + +N + + G R K + D M ++ D I+
Sbjct: 429 CDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVIT 488
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L+ YC + +DEA K+ EG+ +G PN T+ T I C +G + A +F++
Sbjct: 489 YTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMA 548
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P ++ GL + ++I AK
Sbjct: 549 SKGVNPGIVIYSTILHGLFQTRRIAAAK 576
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 132/324 (40%), Gaps = 72/324 (22%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y + GM D AM F +M + G +++++ ++ A R D FD + +
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISE- 410
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ + + L+ C DKA EL EM +G+ T+ + T+LN L K+G A
Sbjct: 411 GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA 470
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ ++ M + V DV Y I G + +L++ M G+KP+ ++YN ++
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIING 530
Query: 282 YCKNEMMDE-----------------------------------AKKVY----------- 295
YCKN +++ AK++Y
Sbjct: 531 YCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP 590
Query: 296 --------EGLEENGCSPNAT----------------TFRTWIYHLCGSGNFDKAYKVFK 331
+GL +N C+ +A TF I L G D+A +F
Sbjct: 591 IGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFA 650
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKK 355
+ +P+ T L+++ L+++
Sbjct: 651 SLLARGLVPNVVTYWLMMKSLIEQ 674
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 11/275 (4%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDE 157
YLC RS A + FD M + G P S I L T L +L +
Sbjct: 285 YLCKNGRSM-------EARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL--D 335
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + PD + +L+ ++ G D+A+ ++M +G+ VTY TV++ L + G
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYN 276
++A + + +G+ + + I D ++ +EL EM G+ P+TI +N
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK M+ AK +++ + + T+ T I C G D+A K+ + V+
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T ++ G K +I++A + R + K
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASK 550
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%), Gaps = 8/258 (3%)
Query: 110 AGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPD 167
AG+ D A+ FD M R V+S+N L+ C R +D + L E+ ++ L+PD
Sbjct: 235 AGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARL-SEMQEQAKLTPD 293
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGV--EVTTVTYTTVLNCLYKQGNAEEAERL 225
K++Y L++ H G+ + L EME +G+ ++ Y V+ L K G E +
Sbjct: 294 KVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAV 353
Query: 226 WSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+ M K+G + A Y I + +G + E + L + M+D+GLK D+++Y ++ C C
Sbjct: 354 FERMLKRGCAANAAIYTALIDSMGKFGREKEAMA-LFERMKDSGLKLDSVTYGVIVNCLC 412
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ +DEA + +E G + NA + + I +G D++ ++F+E + +PD
Sbjct: 413 RFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSY 472
Query: 344 TVKLLVEGLVKKKKIKEA 361
+L++GL K ++ +A
Sbjct: 473 CYNVLIDGLAKSGRMDDA 490
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 168/385 (43%), Gaps = 66/385 (17%)
Query: 42 DKALDIYSSVS-KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE--P 98
D A++++ ++S + P Y ++ ++ ++ R D + + K+T +
Sbjct: 239 DTAVNVFDAMSTEDQVRPDVVSY--NILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVT 296
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA---CTRSRLYDKVPILF 155
YL L++ + G F + F +M+E G + +L C + ++ + + F
Sbjct: 297 YL-TLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAV-F 354
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ + K+ + + Y L+ S G +A+ L M++ G+++ +VTY ++NCL +
Sbjct: 355 ERMLKR-GCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCR 413
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTI 273
G +EA + ++KG+ ++ A + + + +G G ++ KEL +EM G PD+
Sbjct: 414 FGKLDEAVACFRSCQEKGIAVN-AIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSY 472
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGC------------------------------ 303
YN L+ K+ MD+A +Y+ +E++GC
Sbjct: 473 CYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 532
Query: 304 -----SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD---------------FN 343
+P A FRT LC SG F +A ++ E + IP+ F
Sbjct: 533 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAHEDMINVLCKAGRFK 592
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTI 368
L +G+V+K +E G +RT+
Sbjct: 593 QACKLADGIVQKG--REIPGRVRTM 615
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ F E G + I + +L+ ++ + D+ LF+E+ K PD
Sbjct: 415 GKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAK-GFVPDSYC 473
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ SG D A L ME+ G + T TYT +++ L+K+ EEA + W M
Sbjct: 474 YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMI 533
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG+ AA+ + G R ++DE+ G+ P+T ++ ++ CK
Sbjct: 534 DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFK 592
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+A K+ +G+ + G I L +GN D A K+ + +
Sbjct: 593 QACKLADGIVQKGREIPGRVRTMMINALRKAGNTDLAVKLVHSKIGI 639
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 170/368 (46%), Gaps = 14/368 (3%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSVSK-HYASPVSSRYAQDLTVRRLAKSKRFSDI 81
ASS S ++ L + D AL + S++ + SP + L +++L S R +D
Sbjct: 65 ASSASATERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAAL-IKKLCASGRTADA 123
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
++ + D + ++ Y AG D A R M ++N L+
Sbjct: 124 RRVLAASGPDVMVYNA-----MVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRG 175
Query: 142 -CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
C R R + + +L D + PD ++Y +LL++ C +A++LL+EM +KG
Sbjct: 176 LCGRGRTSNALAVLEDMF--RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCA 233
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKEL 259
VTY VLN + ++G E+A + G + + +YN+ + + + E ++L
Sbjct: 234 PDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKL 293
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
++EM G P+ +++N L++ C+ +++ A +V E + + GC+PN+ ++ ++ C
Sbjct: 294 MEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCK 353
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRA 379
KA + + V PD + L+ L + ++ A ++ +K K VL +
Sbjct: 354 QKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLIS 413
Query: 380 WKKVEEEL 387
+ V + L
Sbjct: 414 YNTVIDGL 421
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 161/333 (48%), Gaps = 30/333 (9%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE--SHKNDPKITQEPY 99
+ A++ ++ + P + Y ++ ++ L ++R+ D E L+E +HK P
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSY--NIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
+ LI + G+ + AM +QM + G + +S+N LL A C + +++ + F E+
Sbjct: 311 M--LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME--FVEL 366
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
PD +SY LL + C +G D A+ELL+++++KG ++Y TV++ L K G
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGK 426
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISY 275
+EA L EM KG+ D+ Y+ + D R++E + +++D G++P Y
Sbjct: 427 TKEALELLDEMTSKGLQPDIITYSTIASGLCRED--RIEEAVRTFCKVQDMGIRPTAALY 484
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ CK A ++ + +GC PN +T+ + L G +A ++F +
Sbjct: 485 NAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQ--- 541
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
L G+V KK +K KG I+ +
Sbjct: 542 -----------LCSRGVVNKKLMK--KGSIKML 561
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 177/374 (47%), Gaps = 23/374 (6%)
Query: 16 AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
++TT +I ++ + R D A +++ + SP + Y L + L ++
Sbjct: 346 GCAANTTLCNIVINTICKQGRV----DDAFQFLNNMGSYGCSPDTISYTTVL--KGLCRA 399
Query: 76 KRFSDIETLIES--HKNDP--KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
+R+ D + L++ KN P ++T ++C L Q G+ + A +QM E G +
Sbjct: 400 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILC----QKGLIEQATMLIEQMSEHGCEVN 455
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++++NAL+ C + R+ D LF +P K P+ I+Y LL C++ D A EL
Sbjct: 456 IVTYNALVNGFCVQGRV-DSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAEL 510
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
L EM K VT+ +++ ++G +EA L +M + G ++ YN + T
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ E EL+ + G+ PD ++Y+ ++ + + ++EA K++ +++ G P A
Sbjct: 571 DCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVI 630
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ + LC N D A F V +P+ T L+EGL + +KE + ++R +
Sbjct: 631 YNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELC 690
Query: 370 KK--FPPNVLRAWK 381
+ N+L W+
Sbjct: 691 SRGVLNKNLLEEWR 704
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 141/315 (44%), Gaps = 42/315 (13%)
Query: 99 YLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
YLC LIR+ + G A R + GT V ++N L+ R D L
Sbjct: 110 YLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIAS 169
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+P ++PD +Y +++ CD G +AL LL++M ++G + + VTYT +L + K
Sbjct: 170 MP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKST 225
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRIT------------------NTYGGDP------ 253
+A + EM KG ++ YNV I ++YG P
Sbjct: 226 GFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYT 285
Query: 254 ------------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
E ++EL EM + P+ ++++ L+ +C+ M++ A +V E + +
Sbjct: 286 TVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH 345
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC+ N T I +C G D A++ PD + +++GL + ++ ++A
Sbjct: 346 GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 405
Query: 362 KGVIR-TIKKKFPPN 375
K +++ ++K PPN
Sbjct: 406 KELLKEMVRKNCPPN 420
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 156/345 (45%), Gaps = 24/345 (6%)
Query: 29 SKAKSKLRSEFDPDKALDI--YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE 86
S A LR+ A+D+ Y+++ Y RY Q RRL S + +
Sbjct: 126 SDAARVLRAAERSGTAVDVFAYNTLVAGYC-----RYGQLDAARRLIASMPVAP-----D 175
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
++ P +IR G A+ D M G SV+++ LL A +S
Sbjct: 176 AYTYTP----------IIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKST 225
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+ + + DE+ K +P+ ++Y +++ C G D A E LN + + G + TV+Y
Sbjct: 226 GFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSY 284
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
TTVL L E+ E L++EM +K + +++ + GG ER +++++M
Sbjct: 285 TTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSG 344
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +T N ++ CK +D+A + + GCSP+ ++ T + LC + ++
Sbjct: 345 HGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWED 404
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
A ++ KE V + P+ T + L +K I++A +I + +
Sbjct: 405 AKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+S +A L++ ++G T ++ L ++G +A R+ E+ G +DV AYN
Sbjct: 89 TSPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 148
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G + + LI M A PD +Y ++ C + EA + + +
Sbjct: 149 TLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR 205
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC P+ T+ + +C S F +A +V E P+ T +++ G+ ++ ++ +A
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 362 KGVI-RTIKKKFPPNVL------------RAWKKVEE 385
+ + R F P+ + + W+ VEE
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 302
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 8/265 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
L+ AG+ D A+ FD M R V+S+N L+ C R +D + L E+ +
Sbjct: 224 LLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARL-SEMQE 282
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV--EVTTVTYTTVLNCLYKQGN 218
+ L+PDK++Y L++ H G+ + L EME +G+ ++ Y V+ L K G
Sbjct: 283 QAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGK 342
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYN 276
E ++ M K+G + A Y I + +G + E + L + M+D+GLK D+++Y
Sbjct: 343 PFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMA-LFERMKDSGLKLDSVTYG 401
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ C C+ +DEA + +E G + NA + + I +G D++ ++F+E +
Sbjct: 402 VIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAK 461
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
+PD +L++GL K ++ +A
Sbjct: 462 GFVPDSYCYNVLIDGLAKSGRMDDA 486
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 168/385 (43%), Gaps = 66/385 (17%)
Query: 42 DKALDIYSSVS-KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE--P 98
D A++++ ++S + P Y ++ ++ ++ R D + + K+T +
Sbjct: 235 DTAVNVFDAMSTEDQVRPDVVSY--NILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVT 292
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA---CTRSRLYDKVPILF 155
YL L++ + G F + F +M+E G + +L C + ++ + + F
Sbjct: 293 YL-TLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAV-F 350
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ + K+ + + Y L+ S G +A+ L M++ G+++ +VTY ++NCL +
Sbjct: 351 ERMLKR-GCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCR 409
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTI 273
G +EA + ++KG+ ++ A + + + +G G ++ KEL +EM G PD+
Sbjct: 410 FGKLDEAVACFRSCQEKGIAVN-AIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSY 468
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGC------------------------------ 303
YN L+ K+ MD+A +Y+ +E++GC
Sbjct: 469 CYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 528
Query: 304 -----SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD---------------FN 343
+P A FRT LC SG F +A ++ E + IP+ F
Sbjct: 529 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAHEDMINVLCKAGRFK 588
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTI 368
L +G+V+K +E G +RT+
Sbjct: 589 QACKLADGIVQKG--REIPGRVRTM 611
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ F E G + I + +L+ ++ + D+ LF+E+ K PD
Sbjct: 411 GKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAK-GFVPDSYC 469
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ SG D A L ME+ G + T TYT +++ L+K+ EEA + W M
Sbjct: 470 YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMI 529
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG+ AA+ + G R ++DE+ G+ P+T ++ ++ CK
Sbjct: 530 DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFK 588
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+A K+ +G+ + G I L +GN D A K+ + +
Sbjct: 589 QACKLADGIVQKGREIPGRVRTMMINALRKAGNTDLAVKLVHSKIGI 635
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 189 ELLNEMENKG----VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+L+ E+ G +T + +++ L G AEE W M GV+ YN
Sbjct: 165 QLVAELRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCL 224
Query: 245 ITNTY-GGDPERLKELIDEMR-DAGLKPDTISYNFLMTCYCK-NEMMDEAKKVYEGLEEN 301
+ G + + D M + ++PD +SYN L+ YC+ D ++ E E+
Sbjct: 225 LDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQA 284
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFK---ESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+P+ T+ T + G F +F+ E M + IP V L++ L K K
Sbjct: 285 KLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYV-LVIGALCKDGKP 343
Query: 359 KEAKGVIRTIKKK 371
E V + K+
Sbjct: 344 FEGMAVFERMLKR 356
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 9/287 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G A+ F +M++ G +V++++ ++ + + RL + E+ ++
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVER- 262
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y ++ C+ G ++A L EM + V TVT+T +++ L K+G EA
Sbjct: 263 GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA 322
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL----KELIDEMRDAGLKPDTISYNFL 278
++ M +KGV+ D++ YN + G +RL K++ + M G P SYN L
Sbjct: 323 RLVFETMTEKGVEPDISTYNALMD---GYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNIL 379
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YCK+ MDEAK + + +P+ T+ T + LC G +A +FKE
Sbjct: 380 INGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGP 439
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVLRAWKKVE 384
P+ T +L++G K + EA +++++K KK PN++ +E
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 46/347 (13%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
AK K++S + +L + + ++T Y N LI + D ++ +M +LG
Sbjct: 103 FAKKKQYSTVVSLC-NQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHP 161
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
I+FNAL+ C ++ + V LF+E+ K+ + P+ ISY ++ C +G++ A++
Sbjct: 162 DAITFNALINGLCNEGKIKEAVE-LFNEMVKRGH-EPNVISYTTVINGLCKTGNTSMAVD 219
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI---- 245
+ +ME G + VTY+T+++ L K +A SEM ++G+ +V YN +
Sbjct: 220 VFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFC 279
Query: 246 -----------------------TNTYG---------GDPERLKELIDEMRDAGLKPDTI 273
T T+ G + + + M + G++PD
Sbjct: 280 NLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIS 339
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN LM YC +M+EAKKV+E + GC+P A ++ I C S D+A + E
Sbjct: 340 TYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAE- 398
Query: 334 VMVHKI--PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNVL 377
M HK PD T L++GL + + KEA + + + P PN++
Sbjct: 399 -MYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLV 444
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 133/259 (51%), Gaps = 2/259 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ +F +M + SV+ F L + + + Y V L +++ + ++ + S +
Sbjct: 75 DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQM-DLFRVTHNVYSLNI 133
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C D ++ +L +M G+ +T+ ++N L +G +EA L++EM K+G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ +V +Y I G+ ++ +M G KP+ ++Y+ ++ CK+ ++++A
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + E G PN T+ + ++ C G ++A ++FKE V +P+ T +LV+GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K+ + EA+ V T+ +K
Sbjct: 314 CKEGMVSEARLVFETMTEK 332
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 2/249 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + + A + F+ M G S+N L+ +SR D+ L E+ K
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++Y L++ C G +AL L EM + G VTY +L+ K G+ +EA
Sbjct: 404 -LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEA 462
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L M++K ++ ++ Y + I + G E KEL ++ G +PD +Y ++
Sbjct: 463 LKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKG 522
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + DEA ++ +E++G PN+ ++ I + + A ++ E V +
Sbjct: 523 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVN 582
Query: 342 FNTVKLLVE 350
+T ++L++
Sbjct: 583 LSTFQMLLD 591
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + GM A F+ M E G + ++NAL+ RL ++ +F EI +
Sbjct: 309 LVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF-EIMIRK 367
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P SY +L+ +C S D+A LL EM +K + TVTY+T++ L + G +EA
Sbjct: 368 GCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEA 427
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM G ++ Y + + +G E LK L+ M++ L+P+ + Y L+
Sbjct: 428 LNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK-LLKSMKEKKLEPNIVHYTILIE 486
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
++ AK+++ L +G P+ T+ I L G D+AY +F++ +P
Sbjct: 487 GMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
+ + ++++G ++ + A +I + K+F N+
Sbjct: 547 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 14/255 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES--HK--NDPKITQE 97
++A ++ + + +P + Y ++ + KS+R + ++L+ HK N +T
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSY--NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYS 412
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
L++ Q G A+ F +M G +++++ LL C L + + +L
Sbjct: 413 ----TLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKS 468
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
KK L P+ + Y +L++ +G + A EL +++ G TYT ++ L K+
Sbjct: 469 MKEKK--LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKE 526
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
G ++EA L+ +ME G + +YNV I D LIDEM + ++
Sbjct: 527 GLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTF 586
Query: 276 NFLMTCYCKNEMMDE 290
L+ ++E++ +
Sbjct: 587 QMLLDLESQDEIISQ 601
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 8/265 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
L+ AG+ D A+ FD M R V+S+N L+ C R +D + L E+ +
Sbjct: 227 LLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARL-SEMQE 285
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV--EVTTVTYTTVLNCLYKQGN 218
+ L+PDK++Y L++ H G+ + L EME +G+ ++ Y V+ L K G
Sbjct: 286 QAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGK 345
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYN 276
E ++ M K+G + A Y I + +G + E + L + M+D+GLK D+++Y
Sbjct: 346 PFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMA-LFERMKDSGLKLDSVTYG 404
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ C C+ +DEA + +E G + NA + + I +G D++ ++F+E +
Sbjct: 405 VIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAK 464
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
+PD +L++GL K ++ +A
Sbjct: 465 GFVPDSYCYNVLIDGLAKSGRMDDA 489
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 168/385 (43%), Gaps = 66/385 (17%)
Query: 42 DKALDIYSSVS-KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE--P 98
D A++++ ++S + P Y ++ ++ ++ R D + + K+T +
Sbjct: 238 DTAVNVFDAMSTEDQVRPDVVSY--NILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVT 295
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA---CTRSRLYDKVPILF 155
YL L++ + G F + F +M+E G + +L C + ++ + + F
Sbjct: 296 YL-TLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAV-F 353
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ + K+ + + Y L+ S G +A+ L M++ G+++ +VTY ++NCL +
Sbjct: 354 ERMLKR-GCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCR 412
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTI 273
G +EA + ++KG+ ++ A + + + +G G ++ KEL +EM G PD+
Sbjct: 413 FGKLDEAVACFRSCQEKGIAVN-AIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSY 471
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGC------------------------------ 303
YN L+ K+ MD+A +Y+ +E++GC
Sbjct: 472 CYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 531
Query: 304 -----SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD---------------FN 343
+P A FRT LC SG F +A ++ E + IP+ F
Sbjct: 532 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETAHEDMINVLCKAGRFK 591
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTI 368
L +G+V+K +E G +RT+
Sbjct: 592 QACKLADGIVQKG--REIPGRVRTM 614
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ F E G + I + +L+ ++ + D+ LF+E+ K PD
Sbjct: 414 GKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAK-GFVPDSYC 472
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ SG D A L ME+ G + T TYT +++ L+K+ EEA + W M
Sbjct: 473 YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMI 532
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG+ AA+ + G R ++DE+ G+ P+T ++ ++ CK
Sbjct: 533 DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFK 591
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+A K+ +G+ + G I L +GN D A K+ + +
Sbjct: 592 QACKLADGIVQKGREIPGRVRTMMINALRKAGNTDLAVKLVHSKIGI 638
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 189 ELLNEMENKG----VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+L+ E+ G +T + +++ L G AEE W M GV+ YN
Sbjct: 168 QLVAELRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCL 227
Query: 245 ITNTY-GGDPERLKELIDEMR-DAGLKPDTISYNFLMTCYCK-NEMMDEAKKVYEGLEEN 301
+ G + + D M + ++PD +SYN L+ YC+ D ++ E E+
Sbjct: 228 LDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQA 287
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFK---ESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+P+ T+ T + G F +F+ E M + IP V L++ L K K
Sbjct: 288 KLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYV-LVIGALCKDGKP 346
Query: 359 KEAKGVIRTIKKK 371
E V + K+
Sbjct: 347 FEGMAVFERMLKR 359
>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
Length = 651
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 136/269 (50%), Gaps = 9/269 (3%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFD 156
Y C L+ AG+ D A+ FD M R V+S+N L+ C R +D + L
Sbjct: 270 YNC-LLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARL-S 327
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV--EVTTVTYTTVLNCLY 214
E+ ++ L+PDK++Y L++ H G+ + L EME +G+ ++ Y V+ L
Sbjct: 328 EMQEQAKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALC 387
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDT 272
K G E ++ M K+G + A Y I + +G + E + L + M+D+GLK D+
Sbjct: 388 KDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMA-LFERMKDSGLKLDS 446
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++Y ++ C C+ +DEA + +E G + NA + + I +G D++ ++F+E
Sbjct: 447 VTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEE 506
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ +PD +L++GL K ++ +A
Sbjct: 507 MIAKGFVPDSYCYNVLIDGLAKSGRMDDA 535
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 162/363 (44%), Gaps = 50/363 (13%)
Query: 42 DKALDIYSSVS-KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQE--P 98
D A++++ ++S + P Y ++ ++ ++ R D + + K+T +
Sbjct: 284 DTAVNVFDAMSTEDQVRPDVVSY--NILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVT 341
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA---CTRSRLYDKVPILF 155
YL L++ + G F + F +M+E G + +L C + ++ + + F
Sbjct: 342 YL-TLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAV-F 399
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ + K+ + + Y L+ S G +A+ L M++ G+++ +VTY ++NCL +
Sbjct: 400 ERMLKR-GCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCR 458
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTI 273
G +EA + ++KG+ ++ A + + + +G G ++ KEL +EM G PD+
Sbjct: 459 FGKLDEAVACFRSCQEKGIAVN-AIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSY 517
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGC------------------------------ 303
YN L+ K+ MD+A +Y+ +E++GC
Sbjct: 518 CYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAM 577
Query: 304 -----SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+P A FRT LC SG F +A ++ E + IP+ + ++ L K +
Sbjct: 578 IDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPE-TAHEDMINVLCKAGRF 636
Query: 359 KEA 361
K+A
Sbjct: 637 KQA 639
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 3/189 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ F E G + I + +L+ ++ + D+ LF+E+ K PD
Sbjct: 460 GKLDEAVACFRSCQEKGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAK-GFVPDSYC 518
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ SG D A L ME+ G + T TYT +++ L+K+ EEA + W M
Sbjct: 519 YNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMI 578
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG+ AA+ + G R ++DE+ G+ P+T ++ ++ CK
Sbjct: 579 DKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFK 637
Query: 290 EAKKVYEGL 298
+A K+ +G+
Sbjct: 638 QACKLADGI 646
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 7/178 (3%)
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKE 258
+T + +++ L G AEE W M GV+ YN + G +
Sbjct: 229 HLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVN 288
Query: 259 LIDEMR-DAGLKPDTISYNFLMTCYCK-NEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+ D M + ++PD +SYN L+ YC+ D ++ E E+ +P+ T+ T +
Sbjct: 289 VFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQC 348
Query: 317 LCGSGNFDKAYKVFK---ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G F +F+ E M + IP V L++ L K K E V + K+
Sbjct: 349 HYSEGTFPVCIGLFQEMEERGMGNDIPQHAYV-LVIGALCKDGKPFEGMAVFERMLKR 405
>gi|210077731|gb|ACJ07054.1| putative membrane-associated salt-inducible protein [Aegilops
speltoides]
Length = 289
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+GQAG+ A+ TF +P S S NALLFAC + + + +F P + + P
Sbjct: 57 FGQAGLLPDAISTFQS-----SP-STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKP 110
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ ++KS +SG++ + +EM +GV+ T T+T + YK+ ++ E++
Sbjct: 111 NAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVI 170
Query: 227 SEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
M+K G + YN R+ G K L+ EM G KP+ ++YN L+ +CK
Sbjct: 171 KLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKE 230
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++EAK++Y+ + + G ++ + T I+HLC +G+FD A V+ E + + +P F+T
Sbjct: 231 GDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPCFST 289
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
+T + +L GN EA R++ + V + +N I + + G +
Sbjct: 75 STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFYSV 134
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
DEM G+KP ++ + + K E D+ +KV + ++++GC + + + LC
Sbjct: 135 FDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARVQGLCK 194
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G A + E P++ T L+ G K+ ++EAK + + + KK
Sbjct: 195 LGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGKK 246
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 45/336 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ Q G+ A++ ++M E G ++ ++N ++ C + D ++ D I K
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK- 429
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +Y L+ +C D A E++N M ++G+ +TY T+LN L K G +EE
Sbjct: 430 -GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFL 278
++ ME+KG ++ YN+ + + +++ E +D EM+ GLKPD +S+ L
Sbjct: 489 VMEIFKAMEEKGCTPNIITYNIIVDSL--CKAKKVNEAVDLLGEMKSKGLKPDVVSFGTL 546
Query: 279 MTCYCK------------------------------------NEMMDEAKKVYEGLEENG 302
T +CK M+ A K++ ++ +G
Sbjct: 547 FTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C P+ T+R I C GN + YK E++ IP T ++ L K K+ EA
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666
Query: 363 GVIR-TIKKKFPPNVLRAWKKVEEELGLVPAPAVGD 397
G+I ++K P + + ++++ P V D
Sbjct: 667 GIIHLMLQKGIVPETVNTIFEADKKVVAAPKILVED 702
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 133 ISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+++N+++ C + + D +L D + K + PD+ +Y L+ C G D+A+ +
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFKGF--KPDEFTYCSLINGFCKDGDPDRAMAVF 353
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+ KG+ + V Y T++ L +QG A +L +EM + G ++ YN+ I
Sbjct: 354 KDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKM 413
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G L+D+ G PD +YN L+ YCK +D A ++ + G +P+ T+
Sbjct: 414 GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITY 473
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T + LC +G ++ ++FK P+ T ++V+ L K KK+ EA ++ +K
Sbjct: 474 NTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKS 533
Query: 371 K-FPPNVL 377
K P+V+
Sbjct: 534 KGLKPDVV 541
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 159/378 (42%), Gaps = 58/378 (15%)
Query: 35 LRSEFDPDKALDIYSSVS-----KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESH 88
++ + DP KAL++++S KH AS V++L F ++E L+ E
Sbjct: 14 VKIQTDPLKALEMFNSAKSEDGFKHTASTYKC------IVQKLGHHGEFEEMEKLLSEMR 67
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
+N E +++YG+ G A+ TF++MD SV S NA++ +
Sbjct: 68 ENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYH 127
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
++ ++ + + + D +Y + +KS C + AL LL M G + V Y T
Sbjct: 128 NQAHKVYMRMRDR-GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCT 186
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYG--GDPERL-------- 256
V+ LY G + A L+ EM + + DV A+N V + G + ERL
Sbjct: 187 VVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRG 246
Query: 257 ---------------------------------KELIDEMRDAGLKPDTISYNFLMTCYC 283
+E + +M + G +PD ++YN ++ YC
Sbjct: 247 VCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYC 306
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K M+ +A +V + G P+ T+ + I C G+ D+A VFK+ + P
Sbjct: 307 KKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIV 366
Query: 344 TVKLLVEGLVKKKKIKEA 361
L++GL ++ I A
Sbjct: 367 LYNTLIKGLSQQGLILPA 384
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I Y + GM A R G ++ +L+ + D+ +F + K
Sbjct: 300 SIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGK 359
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P + Y L+K G AL+L+NEM G TY V+N L K G +
Sbjct: 360 -GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSD 418
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYN 276
A L + KG D+ YN I G ++LK E+++ M G+ PD I+YN
Sbjct: 419 ASHLVDDAIAKGCPPDIFTYNTLID----GYCKQLKLDSATEMVNRMWSQGMTPDVITYN 474
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK +E ++++ +EE GC+PN T+ + LC + ++A + E
Sbjct: 475 TLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSK 534
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
PD + L G K I A + R ++K++
Sbjct: 535 GLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 120/274 (43%), Gaps = 46/274 (16%)
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
++++ L E+ + N + + +Y +K++ G +A++ M+ + + ++
Sbjct: 56 FEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHN 115
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI---------------------- 245
++N L + G +A +++ M +GV DV Y +RI
Sbjct: 116 AIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPEL 175
Query: 246 ----------TNTYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
T G G+ + +EL DEM L PD +++N L+ CK ++ E+
Sbjct: 176 GCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFES 235
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY---KVFKESVMVHKI------PDF 342
+++ + + G PN TF ++ LC G D+A +V + + K+ PD
Sbjct: 236 ERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDD 295
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
T +++G KK +++A V++ + K F P+
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPD 329
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y +++ G ++ +LL+EM EN + Y + ++G +EA +
Sbjct: 42 TYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFER 101
Query: 229 MEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
M+ D V ++N + I +G + K + MRD G++ D +Y + +CK
Sbjct: 102 MDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYM-RMRDRGVQSDVYTYTIRIKSFCKTA 160
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
A ++ + E GC NA + T + L SG D A ++F E + PD
Sbjct: 161 RPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFN 220
Query: 347 LLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
LV L KK + E++ ++ + +K+ PN+
Sbjct: 221 KLVHVLCKKGLVFESERLLGKVLKRGVCPNLF 252
>gi|115465257|ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|222632454|gb|EEE64586.1| hypothetical protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 4/272 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+L+ + G D A +LG + +S+N +L AC R +L DE+
Sbjct: 134 SLLNALVSNGRTDAARDMLPLAPKLGVRLNAVSYNIILKGACLRDGFMGARGVL-DEMLS 192
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + P +++ L+ S C G A L++EM +GV TY ++ L
Sbjct: 193 R-GVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHA 251
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+AE+L +ME +G DV Y V +++ GD + ++EL+ MR LKPD SYN L+
Sbjct: 252 DAEKLMFDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSAMRKRKLKPDDASYNILI 311
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C C DEA + ++ G P A T+R + C + +FD +VF +
Sbjct: 312 RCLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHC 371
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P T + L GL + K +EA V+ + ++
Sbjct: 372 PQARTFRHLARGLGEDGKAEEAFFVLEQMARR 403
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 104/239 (43%), Gaps = 20/239 (8%)
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+L+ R+RL+ VP L + + +P + + + H + S A +
Sbjct: 66 VLYRLARARLFPLVPPLLAALHSRG--APLRPTVFAAVIDHLGAASRPDAAVGVFRTVPA 123
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERL 256
+ T+ ++LN L G + A + K GV L+ +YN+ + D
Sbjct: 124 FCSHSAATFHSLLNALVSNGRTDAARDMLPLAPKLGVRLNAVSYNIILKGACLRDGFMGA 183
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+ ++DEM G++P +++N L+ C+ + A+++ + + G +PNA T+ +
Sbjct: 184 RGVLDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRG 243
Query: 317 LCGSGN--------FDKAYKVFKESVMVHKI--------PDFNTVKLLVEGLVKKKKIK 359
LC + FD Y+ + V+ + + D + V+ L+ + +K+K+K
Sbjct: 244 LCDADRHADAEKLMFDMEYRGCQADVVNYGVLMSSRARHGDADGVRELLSAM-RKRKLK 301
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 163/352 (46%), Gaps = 6/352 (1%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
+ S +VS LR ++AL++ V++ SP + + + + L K + F +
Sbjct: 329 SPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSP--NIFVYNALIDSLCKGRNFDEA 386
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
E L + + LI + + G D A+ +M ++G SV +N+L+
Sbjct: 387 ELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLING 446
Query: 142 -CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
C + ++ + I KK L P ++Y L+ +C G +KAL L +EM KG+
Sbjct: 447 HCKFGDISAAESLMAEMINKK--LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIV 504
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
+ T+TT+L+ L++ G +A +L++EM + V + YNV I G+ + E
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEF 564
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
++EM + G+ PDT SY L+ C EAK +GL + C N + ++ C
Sbjct: 565 LNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G ++A V ++ + D +L++G +K K K G+++ + +
Sbjct: 625 EGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR 676
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ Y G + A+R + +M G S+ +F LL R+ L LF E+ +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE- 535
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV---------------------- 199
+N+ P++++Y ++++ +C+ G+ KA E LNEM KG+
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 200 -------------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
E+ + YT +L+ ++G EEA + +M +GVDLD+ Y V I
Sbjct: 596 AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655
Query: 247 NTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ D + L+ EM D GLKPD + Y ++ K EA +++ + GC P
Sbjct: 656 GSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 306 NATTFRTWIYHLCGSGNFDKA 326
N T+ I LC +G ++A
Sbjct: 716 NEVTYTAVINGLCKAGFVNEA 736
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 128/296 (43%), Gaps = 6/296 (2%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
V Y+ + L + + S+ + ++ HK + ++ + Y L+ + + G + A+
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT-GLLHGFCREGKLEEAL 632
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
M G ++ + L+ + + L E+ + L PD + Y ++ +
Sbjct: 633 SVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDR-GLKPDDVIYTSMIDA 691
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+G +A + + M N+G VTYT V+N L K G EAE L S+M +
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPN 751
Query: 238 VAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
Y + I GD ++ EL + + GL +T +YN L+ +C+ M+EA ++
Sbjct: 752 QVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELI 810
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ +G SP+ T+ T I LC + KA +++ PD L+ G
Sbjct: 811 TRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + G F A +D M G + +++ A++ ++ ++ IL ++ +
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM-RP 745
Query: 162 YNLSPDKISYGLLLKSHCDS-GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N P++++YG L G KA+EL N + KG+ T TY ++ +QG E
Sbjct: 746 GNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRME 804
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L + M GV D Y I+ D ++ EL + M + G++PD ++YN L+
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
C M +A ++ + G PN T T I
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 111/283 (39%), Gaps = 38/283 (13%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V + +ALL + R + LFD++ + PD Y +++S C+ +A E++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFDDMIN-VGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+ME G +V V Y +++ L K+ EA + ++ K + DV Y +
Sbjct: 251 VQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKV 310
Query: 251 GDPERLKELIDEM-----------------------------------RDAGLKPDTISY 275
+ E E+IDEM + G+ P+ Y
Sbjct: 311 QEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ CK DEA+ +++ + + G PN T+ I C G D A E +
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ P L+ G K I A+ ++ I KK P V+
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVV 473
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD I+Y ++ C KA+EL N M KG+ V Y T+++ G +A
Sbjct: 817 GVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN 247
L +EM ++G+ + I+N
Sbjct: 877 TELRNEMLRQGLKPNTETSETTISN 901
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 170/344 (49%), Gaps = 14/344 (4%)
Query: 41 PDKALDIYSSVSK--HYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP 98
PD+ I+ S S+ Y S S+ Y+ + A S F + + + K + ++ E
Sbjct: 47 PDQ---IFKSASQMGSYKSGDSTFYS---LIENYANSGDFGTLFQVFDRMKRERRVFIEK 100
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPILFD- 156
+ R+YG+A + + A+ F +M DE R+V SFN++L + L+ + ++
Sbjct: 101 NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYEC 160
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ K N+SP+ +S+ L++K+ C G D+A+E+ EM + E TY T+++ L K+
Sbjct: 161 GVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKE 220
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
+EA L EM+ +G +NV I GD R+ +L+D M G P+ ++Y
Sbjct: 221 DRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTY 280
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG-NFDKAYKVFKESV 334
N ++ C +D+A + + + + C PN T+ T I L G + D + +
Sbjct: 281 NTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEE 340
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
H ++ L+ GL K++K +EA G+ + ++K PN++
Sbjct: 341 RGHHANEY-AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 383
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+ + D A+ D+M G S ++FN L+ + +V L D +
Sbjct: 211 CTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 270
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K P++++Y ++ C G DKA+ LL+ M VTY T++N L KQG +
Sbjct: 271 K-GCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSV 329
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
+ L S +E++G + AY+ I+ + + E L +M + G +P+ + Y+ L+
Sbjct: 330 DGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI 389
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ +DEAK++ + GC+PNA T+ + I +GN KA +V+KE + +
Sbjct: 390 DGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 449
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
P+ +L+ GL + K++EA
Sbjct: 450 PNEICYSVLIHGLCEDGKLREA 471
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 149/349 (42%), Gaps = 20/349 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+ + + P Y + L K R D L+ S + E
Sbjct: 294 DKAVSLLDRMVASKCVPNDVTYGT--LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYS 351
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + + AM + +M E G +++ ++AL+ R D+ + E+ K
Sbjct: 352 TLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 411
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P+ +Y L+K +G+S KA+ + EM + Y+ +++ L + G E
Sbjct: 412 -GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLRE 470
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM--RDAGLKPDTISYNFL 278
A +W+ M +G+ DV AY+ I G E +L +EM +++ +PD ++YN L
Sbjct: 471 AMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNIL 530
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + A + + + GC+P+ T ++ L N + + F + ++V
Sbjct: 531 LRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR- 589
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
L K+++I A +I + +KF P W+++ EL
Sbjct: 590 -------------LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPEL 625
>gi|210077729|gb|ACJ07053.1| putative membrane-associated salt-inducible protein [Secale
cereale]
Length = 289
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 128/239 (53%), Gaps = 7/239 (2%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+GQAG+ A+ TF +P S S NALLFAC + + + +F P + + P
Sbjct: 57 FGQAGLLPDAISTFQS-----SP-STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKP 110
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ ++KS +SG++ + +EM +GV+ T T+T + YK+ ++ E++
Sbjct: 111 NAETFNSIIKSFSESGTTRSFYSVFDEMCKEGVKPTATTFTAAIAGFYKEERFDDVEKVI 170
Query: 227 SEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
M+K G + YN R+ G K L+ EM G KP+ ++YN L+ +CK
Sbjct: 171 KLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKE 230
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++EAK++Y+ + + G ++ + T I+HLC +G+FD A V+ E + + +P F+T
Sbjct: 231 GDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPCFST 289
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
+T + +L GN EA R++ + V + +N I + + G +
Sbjct: 75 STRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFYSV 134
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
DEM G+KP ++ + + K E D+ +KV + ++++GC + + + LC
Sbjct: 135 FDEMCKEGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARVQGLCK 194
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G A + E P++ T L+ G K+ ++EAK + + + KK
Sbjct: 195 LGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGKK 246
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 140/300 (46%), Gaps = 2/300 (0%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ V KS F +T+I + LI + +AG D A+ D
Sbjct: 158 YTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G +++FN++L + R +DK +F + + +++PD S+ +L+ C G
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM-DQCSVAPDVRSFNILIGGFCRVG 276
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
++A++ EM+ +GV V+++ ++ +G + A EM+ G+ D Y
Sbjct: 277 EVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYT 336
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I G + DEM G PD ++YN L+ CK + +A+++ ++E
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G +P+ TF T I+ C GNF+KA ++F + PD L++G+ +K + +A
Sbjct: 397 GVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKA 456
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 39/306 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI + + G + AM+ + +M + G V+SF+ L+ TR ++ D E+ K
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM-DHAAAYLREM-KG 325
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD + Y +++ C +GS +AL + +EM G VTY T+LN L KQ +
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 222 AERLWSEMEKKGV--DL---------------------------------DVAAYNVRIT 246
AE L +EM+++GV DL DV AYN I
Sbjct: 386 AEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLID 445
Query: 247 NT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
GD + EL D+M + P+ ++Y+ L+ +C+ ++EA + + G P
Sbjct: 446 GMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP 505
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ + I C SGN K + ++ + + +PD T L+ G +K++ + A V
Sbjct: 506 NIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVF 565
Query: 366 RTIKKK 371
++K+
Sbjct: 566 NIMEKE 571
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 137/276 (49%), Gaps = 20/276 (7%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGT 128
L K R D E L+ K + +T P LC LI Y + G F+ A++ FD +
Sbjct: 377 LCKQHRLLDAEELLNEMK-ERGVT--PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V+++N+L+ R K L+D++ + + P+ ++Y +L+ SHC+ G ++A
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR-EIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI--- 245
L+EM +KG +TY +++ + GN ++ ++ +M + + D+ +N I
Sbjct: 493 GFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGY 552
Query: 246 ---TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
N +G + + M ++PD ++YN ++ + + M+EA +V++ + +G
Sbjct: 553 IKEENMHGA-----FNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
P+ T+ + I +GN +A+++ E M+H+
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKEAFQLHDE--MMHR 641
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 124/239 (51%), Gaps = 2/239 (0%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
+ N ++ + +S +DK + E+ K+ + PD +++ +L+ + +G D A+ L++
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRC-VFPDVVTHNVLIDARFRAGDVDAAIALVDS 217
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGD 252
M NKG++ VT+ +VL L K ++A+ ++ M++ V DV ++N+ I G+
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
E + EM+ G+ PD +S++ L+ + MD A ++ G P+ +
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I C +G+ +A +V E V + +PD T L+ GL K+ ++ +A+ ++ +K++
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 2/243 (0%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
++M E G + +F L+ R ++K LFD + + L PD ++Y L+ C
Sbjct: 390 LNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ-RLRPDVVAYNSLIDGMC 448
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G KA EL ++M + + VTY+ +++ ++G EEA EM KG ++
Sbjct: 449 RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIM 508
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
YN I G+ ++ ++ + +M + PD I++N L+ Y K E M A V+ +
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIM 568
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E+ P+A T+ I GN ++A +VFK+ PD T L+ G V
Sbjct: 569 EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNS 628
Query: 359 KEA 361
KEA
Sbjct: 629 KEA 631
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKE 258
EV T +++ K ++A+ + SEMEK+ V DV +NV I + GD +
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L+D M + GLKP +++N ++ CK+ D+AK+V+ +++ +P+ +F I C
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
G ++A K +KE PD + L+ + K+ A +R +K
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I+ Y ++G + +M + +I+FN L+ + +F+ I +K
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN-IMEK 570
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +++ + G+ ++A + +M G+E TY +++N GN++E
Sbjct: 571 EMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKE 630
Query: 222 AERLWSEMEKKGVDLD 237
A +L EM +G D
Sbjct: 631 AFQLHDEMMHRGFAPD 646
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 136/277 (49%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y GM D A + F +M E G V+++N L+ R + + + L ++ K
Sbjct: 269 LISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV-NKV 327
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP+ ++Y +L+ CD G D A+ L N++++ G+ T VTY T++ K N A
Sbjct: 328 GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EME++ + Y + I + + E+ E+ M +GL PD +Y+ L+
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILI-DAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIH 446
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + M EA K+++ L E PN+ + T I+ C G+ +A ++ E V +P
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVP 506
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
+ + + L + +K KEA+ ++ + I P+V
Sbjct: 507 NVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV 543
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 150/322 (46%), Gaps = 4/322 (1%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
S + H S AQ L +R ++ S + L ++H P +T P ++ +Y
Sbjct: 42 SFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFT-PCLTYTPLYDTIVNAYV 100
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+ D A+ M G +FN L+ RS +DK +F+E+ K L D
Sbjct: 101 HSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVL--DA 158
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
S+G+++K C++G K LL +E G+ V YTT+++ K GN A+ L+ +
Sbjct: 159 YSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCK 218
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M++ G+ + Y+V + + +R ++ + M+ +G+ P+ +YN L++ YC M
Sbjct: 219 MDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGM 278
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D+A KV+ + E G + T+ I LC F +A K+ + V P+ T +
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338
Query: 348 LVEGLVKKKKIKEAKGVIRTIK 369
L+ G K+ A + +K
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLK 360
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 155/346 (44%), Gaps = 13/346 (3%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD---IETLIESHKND 91
+RS + DKA I++ + + V Y+ + ++ ++ F + ++E
Sbjct: 135 IRSNYF-DKAWWIFNELK---SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P + L + YG + A F +MD LG + +++ L+ + L +
Sbjct: 191 PNVVIYTTLIDGCCKYGNVML---AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREG 247
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+++ + K+ + P+ +Y L+ +C+ G DKA ++ EM KG+ +TY ++
Sbjct: 248 FQMYENM-KRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIG 306
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
L + EA +L ++ K G+ ++ YN+ I G + L ++++ +GL P
Sbjct: 307 GLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
++YN L+ Y K E + A + + +EE +P+ T+ I +KA ++
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMH 426
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPN 375
+PD T +L+ GL +KEA + +++ + PN
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPN 472
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + + A M++ G V +++ L+ + LF + + +
Sbjct: 409 LIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH 468
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ + Y ++ +C GSS +AL LLNEM + G+ ++ + + L + +EA
Sbjct: 469 -LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEA 527
Query: 223 ERLWSEMEKKGVDLDVAAY 241
E L +M G+ V+ Y
Sbjct: 528 ELLLGQMINSGLKPSVSLY 546
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 162/356 (45%), Gaps = 31/356 (8%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ + S + K P + Y + L K++R S+ L+E I
Sbjct: 98 DEAVALLSKMRKK-CVPTAVTYNS--LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYT 154
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI + ++ D A+R F+Q+ G V++++ L+ C RL + + LF + K
Sbjct: 155 TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID-LFGRMIK 213
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ ++Y L+ C G D+A+ LL M G VTYTT++N K +
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKE---LIDEMRDAGLKPDTISY 275
+A L ++M +KG+ DV + T+ G RL + ++ EMR P +Y
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTF----TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 329
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ YC+ ++EA+K LEE C PN +F I LC +A ++ +E+
Sbjct: 330 NTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 387
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVP 391
PD +++GL ++KK+ EA R ++K+ EE G +P
Sbjct: 388 RRCNPDVVMYTTVIDGLCREKKVDEA---------------CRVYRKMLEEPGCLP 428
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 133/267 (49%), Gaps = 11/267 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + + G D AM ++M E G+ V+++ L+ C +RL D +L +++ +
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL-NQMTR 284
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L+PD +++ L+ C A+ +L EM K T TY T+L+ + E
Sbjct: 285 K-GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
EA + +E+ +V ++N+ I + EL++E R PD + Y ++
Sbjct: 344 EARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401
Query: 280 TCYCKNEMMDEAKKVY-EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
C+ + +DEA +VY + LEE GC PN+ T+ T I LC +G D+A ++
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGC---- 457
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+P+ T LL++ K + ++A+ ++
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELL 484
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
S D ++Y L++ C ++AL L +M +KG TYT V++ L + EA +
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 225 LWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
EM + + +V Y V I GG + L+ +MR + P ++YN L++ C
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLC 126
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K E EA + E + +GC P+ T+ T I C S D A +VF++ V PD
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 344 TVKLLVEGLVKKKKIKEA 361
T L++GL K+ ++KEA
Sbjct: 187 TYSCLIDGLCKEGRLKEA 204
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 10/241 (4%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C RL + L + K ++ PD +Y ++ + C +A + L EM N+ +
Sbjct: 22 CKVKRLEQALIFLGKMVSKGFH--PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTP 79
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE--- 258
VTYT +++ L K G +EA L S+M KK V V YN I+ ER E
Sbjct: 80 NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLC--KAERASEAYD 136
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L++EM +G PD +Y L+T +CK++ D+A +V+E L G P+ T+ I LC
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196
Query: 319 GSGNFDKAYKVFKESVMVHK-IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
G +A +F + +P+ T L+ G + K+ EA ++ R + P+V
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256
Query: 377 L 377
+
Sbjct: 257 V 257
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y L+ CK + +++A + G P+ T+ I+ LC +A K
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+E + P+ T +L++GL K ++ EA ++ ++KK P +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV 116
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 3/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Q G FD A++ FD+M + + ++F L+ C R+ + + + D + K
Sbjct: 158 LIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDML-KV 216
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + P Y L+K+ C G A +L +E ++V + Y+T+++ L K G + E
Sbjct: 217 YGVRPTVHIYASLVKALCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRSNE 276
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
R+ EM +KG D YNV I D E ++DEM + GLKPD ISYN ++
Sbjct: 277 VSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEKGLKPDVISYNMILG 336
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + +EA ++E + GCSP+ ++R LC F++A + E + P
Sbjct: 337 VLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAAILDEMLFKGYKP 396
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ ++ ++ L + K++ VI ++ +
Sbjct: 397 RRDRLERFLQKLCESGKLEILSKVISSMHR 426
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 165/351 (47%), Gaps = 15/351 (4%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS-RYA---QDLTVRRLAKSK 76
+ S+S + S LR E DP A+ ++ + +P RY+ D+ + +L SK
Sbjct: 2 SAVKSVSSFRLASLLRRENDPSAAIKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSK 61
Query: 77 RFSDIETLIESHKNDPKIT-QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
F +++ ++ K D +I E CN+I +G+ + A+ FD+M + R+V S
Sbjct: 62 MFDELDQVLLQLKTDTRIVPTEILFCNVINFFGRGRLPSRALHMFDEMPQYRCQRTVKSL 121
Query: 136 NALLFACTRSRLYDKVPILF---DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
N+LL + ++K+ DE K PD +Y +L+ G D AL+L +
Sbjct: 122 NSLLNTLLKCGEFEKMKERLSSIDEFGK-----PDACTYNILIHGCSQRGCFDDALKLFD 176
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK-KGVDLDVAAYNVRITNTYG- 250
EM K V+ T VT+ T+++ L K +EA ++ +M K GV V Y +
Sbjct: 177 EMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDMLKVYGVRPTVHIYASLVKALCQI 236
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ +L DE + +K D+ Y+ L++ K +E ++ E + E GC P+ T+
Sbjct: 237 GELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRSNEVSRILEEMSEKGCKPDTVTY 296
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
I C + + AY+V E V PD + +++ L + +K +EA
Sbjct: 297 NVLINGFCVENDSESAYRVLDEMVEKGLKPDVISYNMILGVLFRIQKWEEA 347
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A R D+M E G VIS+N +L R + +++ LF+++P++ SPD +SY +
Sbjct: 310 ESAYRVLDEMVEKGLKPDVISYNMILGVLFRIQKWEEATYLFEDMPRR-GCSPDTLSYRI 368
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
+ C+ ++A +L+EM KG + L L + G E ++ S M +
Sbjct: 369 VFDGLCEGLQFEEAAAILDEMLFKGYKPRRDRLERFLQKLCESGKLEILSKVISSMHRGN 428
Query: 234 VDLDVAAYNVRITNTYGGDP 253
D D ++V I T +P
Sbjct: 429 AD-DAKVWSVMIPTTMCKEP 447
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 15/335 (4%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKND 91
L E +AL ++ SV + P Y ++ + L K R ++ L H +
Sbjct: 268 LAREQGVSEALKLFGSVLRQGYEPEVPTY--NILIDGLLKEDRVNEAFELFSGLVKHGLE 325
Query: 92 P-KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
P IT ++ L + AG + A+ MDE G V+S NA++ + + D+
Sbjct: 326 PDAITYTVFIDGLCK----AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 381
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
+L + K SP+ IS+ L+ C +G KA+ EM +GV+ T VTY ++
Sbjct: 382 AEVLLSGMEAK-GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 440
Query: 211 NCLYK---QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDA 266
+ L K +G +EA L+ M +KG DV Y+ I G + + L+ M
Sbjct: 441 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G P+ +YN L++ C + +DEA +++ + E GC P+ T+ T I LC DKA
Sbjct: 501 GCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKA 560
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+F S+ +P L++GL ++ EA
Sbjct: 561 LALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEA 595
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 136/294 (46%), Gaps = 7/294 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A +++S + KH P + Y + + L K+ R D +++ +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYT--VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + D A M+ G + ISFN L+ R+ + K F E+ K+
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427
Query: 162 YNLSPDKISYGLLLKSHCDS---GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ P ++Y +L+ C + G +A+ L + M KG VTY+ +++ L K G
Sbjct: 428 -GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 486
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
++A RL ME KG +V YN I+ G D + EL M + G PDTI+Y
Sbjct: 487 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGT 546
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+++ CK EM+D+A +++G E G P + + + I LC D+A K+ +
Sbjct: 547 IISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL I+ K P Y + + K+ + + + +++ ++ +
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTY--NALINGFCKADKLDEAQRILQRMVSESLVPDVVTYN 194
Query: 102 NLIRSYGQAGMFDHA-MRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
+L+ + G D A M D+ G +VI+++ L+ C R + L +++
Sbjct: 195 SLVNGLCKNGRVDEARMLIVDK----GFSPNVITYSTLISGLCRELRRLESARQLLEKMV 250
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
PD +SY L+ +AL+L + +G E TY +++ L K+
Sbjct: 251 LN-GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA L+S + K G++ D Y V I G E ++ +M + G PD +S+N +
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + +DEA+ + G+E GCSPNA +F T I C +G + KA FKE +
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429
Query: 339 IPDFNTVKLLVEGLVKKK---KIKEAKGVI-RTIKKKFPPNVL 377
P T +LV+GL K + +IKEA + I+K P+V+
Sbjct: 430 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 472
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 159/338 (47%), Gaps = 11/338 (3%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
A ++ + KH P +R + + L R SD + L E L
Sbjct: 69 AQTVFDGMRKHGFWP--NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL 126
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
+ + + G D A++ FD + G V+++NAL+ ++ D+ + + + +
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-S 185
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ-GNAEEA 222
L PD ++Y L+ C +G D+A L+ +KG +TY+T+++ L ++ E A
Sbjct: 186 LVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESA 242
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L +M G D+ +YN I G E LK +R G +P+ +YN L+
Sbjct: 243 RQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ-GYEPEVPTYNILID 301
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K + ++EA +++ GL ++G P+A T+ +I LC +G + A + K+ +P
Sbjct: 302 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D + ++ GL K+K++ EA+ ++ ++ K PN +
Sbjct: 362 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 399
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 6/225 (2%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
++D++ + Y SPD + G+LL+S SG +KA + ++ KG+ T+ ++ L
Sbjct: 4 VYDKLVRIY--SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGL 60
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
+ +A+ ++ M K G + YN ++ GG + L + M AG PD
Sbjct: 61 CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ +CK +DEA K+++G + G P+ T+ I C + D+A ++ +
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
V +PD T LV GL K ++ EA+ +I + K F PNV+
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI--VDKGFSPNVI 223
>gi|222612695|gb|EEE50827.1| hypothetical protein OsJ_31237 [Oryza sativa Japonica Group]
Length = 550
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 93 KITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+I+ Y N++ R++ G A D+M E G R+ +SFN L+ A R + D
Sbjct: 248 RISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGV-DAG 306
Query: 152 PILFDEIP-KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
P L ++ ++ L PD ++Y ++ C G KA ++L+EM KGV TVTY T++
Sbjct: 307 PALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLI 366
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
+ G+ A R+ EM K V+LD+ YN I G ++++ L+ E+ A L+
Sbjct: 367 HGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLE 426
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +++ L+ +CK + + A ++ ++++G PN TT++ I C + + + A V
Sbjct: 427 PNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDV 486
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK--KFPPNV 376
+ + PD + +GL K KK+ A+ +R++ KF P+V
Sbjct: 487 MGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAEN-LRSLNNGLKFIPDV 534
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F M G V+S N + A R + F E+ ++ +SP+ + ++L
Sbjct: 202 ATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVL 260
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-NAEEAERLWSEMEKKGV 234
++ CD G + A E+L++M GV TTV++ T++ + G +A A +L +ME++G+
Sbjct: 261 RAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGL 320
Query: 235 DLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV Y+ I G + +++ EMR G+ P+T++YN L+ Y A +
Sbjct: 321 VPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGR 380
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
V+E + +N + T+ I LC G K + +E P+ +T L+ G
Sbjct: 381 VHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWC 440
Query: 354 KKKKIKEAKGVIRTIKKK-FPPN 375
K + + A ++ +KK F PN
Sbjct: 441 KMQNSERALQLLNVMKKSGFHPN 463
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + G+ G+ F + FD+M G I+FN+LL C++ L++ L E+ +
Sbjct: 153 VIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNR 212
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D +Y LL + C G D A E+++EM K + VTY+T+++ K G ++
Sbjct: 213 -GIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDD 271
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A L++EM+ G+ LD +YN + + Y G E ++ EM ++G++ D ++YN L+
Sbjct: 272 ARNLFNEMKFLGISLDRVSYNT-LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 330
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K D +KV+E ++ SPN T+ T I G + +A VF+E
Sbjct: 331 GGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLK 390
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D L++ L K ++ A ++ + K+ PNV+
Sbjct: 391 ADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVV 429
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 12/237 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +I S + P Y+ + AK+ R D L K
Sbjct: 235 DMAFEIMSEMPAKNILPNVVTYST--MIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYN 292
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ Y + G F+ AM +M+ G + V+++NALL + YD V +F+E+ +
Sbjct: 293 TLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKAR 352
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +SP+ ++Y L+ + G +A+++ E + G++ V Y+ +++ L K G E
Sbjct: 353 H-VSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVES 411
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAG----LKPDTIS 274
A L EM K+G+ +V YN I + + G P + ++D DAG L+ D++S
Sbjct: 412 AVSLLDEMTKEGIRPNVVTYN-SIIDAF-GRPATTESVVD---DAGQTSELQIDSLS 463
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y +AG D A F++M LG +S+N LL + +++ + E+
Sbjct: 259 MIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENS- 317
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D ++Y LL + D ++ EM+ + V +TY+T+++ K G EA
Sbjct: 318 GIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREA 377
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ E +K G+ DV Y+ I G E L+DEM G++P+ ++YN ++
Sbjct: 378 MDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDA 437
Query: 282 Y 282
+
Sbjct: 438 F 438
>gi|20279450|gb|AAM18730.1|AC092548_8 hypothetical protein [Oryza sativa Japonica Group]
Length = 729
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 93 KITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+I+ Y N++ R++ G A D+M E G R+ +SFN L+ A R + D
Sbjct: 427 RISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGV-DAG 485
Query: 152 PILFDEIP-KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
P L ++ ++ L PD ++Y ++ C G KA ++L+EM KGV TVTY T++
Sbjct: 486 PALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLI 545
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
+ G+ A R+ EM K V+LD+ YN I G ++++ L+ E+ A L+
Sbjct: 546 HGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLE 605
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +++ L+ +CK + + A ++ ++++G PN TT++ I C + + + A V
Sbjct: 606 PNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDV 665
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK--KFPPNV 376
+ + PD + +GL K KK+ A+ +R++ KF P+V
Sbjct: 666 MGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAEN-LRSLNNGLKFIPDV 713
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F M G V+S N + A R + F E+ ++ +SP+ + ++L
Sbjct: 381 ATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVL 439
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-NAEEAERLWSEMEKKGV 234
++ CD G + A E+L++M GV TTV++ T++ + G +A A +L +ME++G+
Sbjct: 440 RAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGL 499
Query: 235 DLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV Y+ I G + +++ EMR G+ P+T++YN L+ Y A +
Sbjct: 500 VPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGR 559
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
V+E + +N + T+ I LC G K + +E P+ +T L+ G
Sbjct: 560 VHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWC 619
Query: 354 KKKKIKEAKGVIRTIKKK-FPPN 375
K + + A ++ +KK F PN
Sbjct: 620 KMQNSERALQLLNVMKKSGFHPN 642
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 127 GTPRSVISFNALLFACTR--------SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
G+P V+S+N +L + ++ DK + + + K + PD ++Y +L +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGY 254
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C SG +A+ L +M + GVE VTY++++N L K G + EA +++ M K+G++ D+
Sbjct: 255 CSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 314
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A Y + + G ++L D M G+KPD I+YN L+ C MDEA K+
Sbjct: 315 ATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 374
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ G P+ T+ T I C D A +FKE V P+ T ++++GL ++
Sbjct: 375 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 434
Query: 358 IKEAKGVIRTIKK 370
AK + +I K
Sbjct: 435 TAAAKELYVSITK 447
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 130/280 (46%), Gaps = 16/280 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG D + + G I+F LL C R D + I+ + +
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM-TE 156
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQG- 217
PD SY LLK CD S +ALELL+ M + G V+Y TVLN +K+G
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216
Query: 218 -------NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGL 268
++A + + M K GV D YN I + Y G P+ + +MR G+
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYN-SILHGYCSSGQPKEAIGTLKKMRSDGV 275
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+P+ ++Y+ LM CKN EA+K+++ + + G P+ T+RT + C G ++ K
Sbjct: 276 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEK 335
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+F V + PD T L++G K+ EA ++ ++
Sbjct: 336 LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 35/258 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++ + + G + + FD M +G +I++N L+ C + D+ L +
Sbjct: 320 LLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS-V 378
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++YG L+ +C D AL L EM + GV +TY +L L+ A
Sbjct: 379 GVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 438
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ L+ + K G L+++ YN+ ++
Sbjct: 439 KELYVSITKSGTQLELSTYNI----------------------------------ILHGL 464
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CKN + DEA ++++ L TF I L G D+A +F +PD
Sbjct: 465 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 524
Query: 343 NTVKLLVEGLVKKKKIKE 360
T L+ E L+++ ++E
Sbjct: 525 RTYSLMAENLIEQGSLEE 542
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 22/231 (9%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA- 222
++P +Y +L+ C +G D L + KG V +T+T +L L +A
Sbjct: 88 VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEM------RDAGLKPDTIS 274
+ + M + G DV +YN N G D R +E ++ + R G PD +S
Sbjct: 148 DIVLRRMTELGCIPDVFSYN----NLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 203
Query: 275 YNFLMTCYCKN--------EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
YN ++ + K + MD+A +V + +NG P+ T+ + ++ C SG +A
Sbjct: 204 YNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEA 263
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
K+ P+ T L+ L K + EA+ + ++ K+ P++
Sbjct: 264 IGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDI 314
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 144/309 (46%), Gaps = 21/309 (6%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT--- 128
LAK F L++ + + LIR Y +A M A F +M+E G
Sbjct: 155 LAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAP 214
Query: 129 -PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P ++ S LL A ++ RL + +FD K +PD + Y L+ + C SG D+A
Sbjct: 215 DPATLAS---LLGALSKKRLASEAQAMFDSY--KSVFTPDVVLYTTLVHAWCRSGRLDEA 269
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRIT 246
+ EM+ GV TYT V++ +Y+ G A+ L +M G + A +N +
Sbjct: 270 ERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRA 329
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC--KNEMMDEAKKVYEGLEENGCS 304
+ G E++ ++ ++MR G +PD I+YNFLM +C +D A K+ + GC
Sbjct: 330 HVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCI 389
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL---------VEGLVKK 355
P+ TF + + GN + A K+++ + P+ T LL ++ +++
Sbjct: 390 PDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRI 449
Query: 356 KKIKEAKGV 364
K+ +A+GV
Sbjct: 450 KRDMDAQGV 458
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 164/343 (47%), Gaps = 13/343 (3%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKR 77
S ++ + ++ + +R+E P +A D++ + ++ A +P + A L L+K +
Sbjct: 175 SVPISAQLILALIRRYVRAEM-PSEASDLFRRMEEYGAGAPDPATLASLLGA--LSKKRL 231
Query: 78 FSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
S+ + + +S+K+ P + L+ ++ ++G D A R F +M + G +V ++
Sbjct: 232 ASEAQAMFDSYKSVFTPDVV---LYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTY 288
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
A++ A R+ + L ++ P+ ++ ++++H +G S++ L++ N+M
Sbjct: 289 TAVIDAMYRAGQVPRAQELLCQMIDS-GCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMR 347
Query: 196 NKGVEVTTVTYTTVL--NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
G E +TY ++ +C Q N + A ++ + M KG D +N + G+
Sbjct: 348 QLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGN 407
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
++L + M++ KP+ ++YN LM + + MD ++ ++ G PN T+
Sbjct: 408 VNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAA 467
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
I CG GN+ +A+ +E V + V +V L++K
Sbjct: 468 LIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRK 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMR 264
Y +++ L K + A L EM ++ V + I + P +L M
Sbjct: 148 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 207
Query: 265 DAGL-KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+ G PD + L+ K + EA+ +++ + + +P+ + T ++ C SG
Sbjct: 208 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYK-SVFTPDVVLYTTLVHAWCRSGRL 266
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
D+A +VF E P+ T +++ + + ++ A+ ++ + I PPN
Sbjct: 267 DEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPN 319
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 170/314 (54%), Gaps = 12/314 (3%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V LAK +++ + ++ + + E + ++R Y +A D A+ TF+ M++ G
Sbjct: 108 VVASLAKIRQYQLMWDVVAIMRRQGVVNVETFGI-IMRKYARAQKVDEAVYTFNVMEKYG 166
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ +FN+LL A +S+ K +F+++ ++ SPD +Y +LL+ + + K
Sbjct: 167 VVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRF--SPDAKTYSILLEGWGRAPNLPKM 224
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++ ++M + G + VTY +++ L K G EEA + +M +G Y+V + +
Sbjct: 225 RKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSV-LVH 283
Query: 248 TYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
TYG + R+++ + +M+ G+ PD + YN L+T +CK + D A +V + +E +G +
Sbjct: 284 TYGVE-MRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGIT 342
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKG 363
PN+ T+ + L G D+AY+VF+ M+ + PD +T ++++ + +++ A
Sbjct: 343 PNSRTWNIILNKLISLGKDDEAYRVFRR--MIKRCQPDSDTYTMMIKMFCENDRLEMALK 400
Query: 364 VIRTIK-KKFPPNV 376
V + ++ K+F P++
Sbjct: 401 VWKYMRLKQFLPSM 414
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 116/265 (43%), Gaps = 10/265 (3%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI-SYGLLLKSHCDSGSSD 185
G +V SF+ ++ + + R Y +++D + + ++G++++ + + D
Sbjct: 97 GCAHTVRSFHTVVASLAKIRQYQ---LMWDVVAIMRRQGVVNVETFGIIMRKYARAQKVD 153
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A+ N ME GV + ++L L K N +A+ ++ +M + D Y++ +
Sbjct: 154 EAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTYSI-L 211
Query: 246 TNTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+G P +++++ +M DAG +PD ++Y ++ CK ++EA V + + GC
Sbjct: 212 LEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGC 271
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P + ++ + A F + +PD LV K KK A
Sbjct: 272 QPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFR 331
Query: 364 VIRTIK-KKFPPNVLRAWKKVEEEL 387
V+ ++ PN R W + +L
Sbjct: 332 VMDDMEGHGITPNS-RTWNIILNKL 355
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 8/276 (2%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L +L+ + A+ DQM E+G ++F L+ + + L + +
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K PD ++YG ++ C G D AL LLN+ME +E V Y+TV++ L K +
Sbjct: 198 VK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRIT--NTYG--GDPERLKELIDEMRDAGLKPDTISY 275
++A L++EM+ KG+ DV Y+ I+ YG D R L+ +M + + P+ +++
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR---LLSDMLERKINPNVVTF 313
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ + K + EA+K+++ + + PN T+ + I C D+A ++F V
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+PD T L+ G K KK+ + + R + ++
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 139/287 (48%), Gaps = 6/287 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ ++M++ V+ ++ ++ + + R D LF E+ K + PD +Y
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSS 280
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C+ G A LL++M + + VT+ ++++ K+G EAE+L+ EM ++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 234 VDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+D ++ YN I D + +++ M PD ++YN L+ +CK + + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+++ + G N T+ T I+ + + D A VFK+ V P+ T L++GL
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 353 VKKKKIKEAKGVIRTIKK-KFPPNVLRAWKKVEEELGLVPAPAVGDG 398
K K+++A V ++K K P++ + + E G+ A V DG
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDI-YTYNIMSE--GMCKAGKVEDG 504
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M+ LG ++ ++N ++ C RS+L + IL +
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P ++ LL C +A+ L+++M G + TVT+TT+++ L++ A E
Sbjct: 131 Y--GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 188
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M KG D+ Y I G+P+ L+++M ++ D + Y+ ++
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D+A ++ ++ G P+ T+ + I LC G + A ++ + + P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ K+ K+ EA+ + I++ PN++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 149/338 (44%), Gaps = 10/338 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND---PKITQ 96
+PD AL++ + + K Y+ + L K + D L N P +
Sbjct: 220 EPDLALNLLNKMEKGKIEADVVIYST--VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
L + + +YG+ + A R M E +V++FN+L+ A + + LFD
Sbjct: 278 YSSLISCLCNYGR---WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ ++ ++ P+ ++Y L+ C D+A ++ M +K VTY T++N K
Sbjct: 335 EMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISY 275
+ L+ +M ++G+ + Y I + D + + + +M G+ P+ ++Y
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ CKN +++A V+E L+++ P+ T+ +C +G + + +F +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
PD ++ G KK +EA + +K+ P
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 140/313 (44%), Gaps = 47/313 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
D AL++++ + P Y+ ++ L R+SD L+ K +P +
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISC--LCNYGRWSDASRLLSDMLERKINPNVVT-- 312
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+LI ++ + G A + FD+M + +++++N+L+ C RL D+ +F
Sbjct: 313 -FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTL 370
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K L PD ++Y L+ C + +EL +M +G+ TVTYTT+++ ++
Sbjct: 371 MVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN---------------------------TY- 249
+ + A+ ++ +M GV ++ YN + TY
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 250 --------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
G E +L + G+KPD I+YN +++ +CK + +EA ++ ++E+
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 302 GCSPNATTFRTWI 314
G P++ T+ T I
Sbjct: 550 GPLPDSGTYNTLI 562
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + QA D+A F QM G +++++N LL ++ +K ++F E +K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQKS 479
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++ + C +G + +L + KGV+ + Y T+++ K+G EEA
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
L+ +M++ G D YN I + GD ELI EMR D +Y +
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 7/233 (3%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D+ LF E+ K P + + LL + D + +ME GV TY
Sbjct: 47 DEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRD 265
++NCL ++ A + +M K G + N + G+ R+ E L+D+M +
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN--RISEAVALVDQMVE 163
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +PDT+++ L+ ++ EA + E + GC P+ T+ I LC G D
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
A + + D +++ L K + + +A + + K P+V
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR A D A+ +M E G +V+ ++ LL ++ ++ V +F+E+ +
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGR- 212
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD + Y L+ S C G KA +++++M +G+E VTY ++N + K+G+ +EA
Sbjct: 213 GIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEA 272
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEM--RDAGLKPDTISYNFLM 279
L + M +KGV LD YN IT G + + L++EM + ++P+ +++N ++
Sbjct: 273 MSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVI 332
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK M +A +V + + ENGC+ N TF I L KA ++ E
Sbjct: 333 HGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLE 392
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T +L+ G K ++ A+ ++ +++
Sbjct: 393 PDSFTYSILINGFCKMWQVDRAESLLSKMRR 423
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 11/259 (4%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPD 167
Q G D A+ M P +V S+ L+ A C R V +L D + + PD
Sbjct: 91 QGGCLDAALFLLRVMAHETRPTAV-SYTTLMRALCAERRTGQAVGLLRDM--QASGVRPD 147
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
++YG L++ CD+ DKA+ELL EM G+E V Y+ +L K G E +++
Sbjct: 148 VVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFE 207
Query: 228 EMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
EM +G++ DV Y I + G ++ +++D+M + GL+P+ ++YN L+ CK
Sbjct: 208 EMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEG 267
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK----IPDF 342
+ EA + + E G + +A T+ T I L G D+A + +E M+H P+
Sbjct: 268 SVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE--MIHGETMVEPNV 325
Query: 343 NTVKLLVEGLVKKKKIKEA 361
T ++ GL K ++++A
Sbjct: 326 VTFNSVIHGLCKTGRMRQA 344
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 9/235 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + G A + D M E G ++++FN L+ R K L DE+
Sbjct: 330 SVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+ C D+A LL++M G+E V Y +L L +QG E+
Sbjct: 390 -GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQ 448
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG----DPERLKELIDEMRDAGLKPDTISYNF 277
A + EM K LDV AY+ I +G D + +E + M D GL PD+++Y+
Sbjct: 449 ARNFFDEMHKN-CKLDVVAYSTMI---HGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSM 504
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
L+ + + + A++V + + +G P+ F + I G+ +K ++ +E
Sbjct: 505 LINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIRE 559
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 52/300 (17%)
Query: 79 SDIETLIESHKNDPKITQEP----YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+D++ +E + + EP Y C L++ Y +AG ++ + F++M G V+
Sbjct: 162 ADVDKAVELLREMCESGIEPNVVVYSC-LLQGYCKAGRWECVSKVFEEMSGRGIEPDVVM 220
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+ L+ + R K + D++ ++ L P+ ++Y +L+ S C GS +A+ L N M
Sbjct: 221 YTGLIDSLCREGKVKKATQVMDKMMER-GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279
Query: 195 ENKGVEVTTVTYTT-------------------------------------VLNCLYKQG 217
KGV + VTY T V++ L K G
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG 339
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-----DPERLKELIDEMRDAGLKPDT 272
+A ++ M + G ++ +N+ I GG ++ EL+DEM +GL+PD+
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLI----GGLLRVHKVKKAMELMDEMASSGLEPDS 395
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+Y+ L+ +CK +D A+ + + +G P + + LC G ++A F E
Sbjct: 396 FTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 129 PRSVISFNALLFACTRS-------RLYDKVPILFDEIPKKYNLSP---DKISYGLLLKSH 178
PR F A+L R+ RL VP+ E P + P D +SY +L +
Sbjct: 31 PRRAAPFLAVLLRRGRAEASARLNRLLRLVPL--PESPALLSSLPSVRDAVSYNTVLAAL 88
Query: 179 CDSGSS-DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
C G D AL LL M ++ T V+YTT++ L + +A L +M+ GV D
Sbjct: 89 CRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPD 147
Query: 238 VAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
V Y I D ++ EL+ EM ++G++P+ + Y+ L+ YCK + KV+E
Sbjct: 148 VVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFE 207
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ G P+ + I LC G KA +V + + P+ T +L+ + K+
Sbjct: 208 EMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEG 267
Query: 357 KIKEA 361
+KEA
Sbjct: 268 SVKEA 272
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 124/305 (40%), Gaps = 36/305 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE-IPKK 161
LI S + G AM + M E G +++N L+ + D+ L +E I +
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +++ ++ C +G +A ++ + M G VT+ ++ L + ++
Sbjct: 319 TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKK 378
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L EM G++ D Y++ I +R + L+ +MR G++P+ + Y L+
Sbjct: 379 AMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLA 438
Query: 281 CYCKNEMMDEAKKVYEGLEEN----------------------------------GCSPN 306
C+ MM++A+ ++ + +N G P+
Sbjct: 439 ALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPD 498
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ T+ I SG+ A +V K+ +PD L++G K ++ +IR
Sbjct: 499 SVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIR 558
Query: 367 TIKKK 371
+ K
Sbjct: 559 EMTAK 563
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 5/185 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + D A +M G ++ + LL A + ++ FDE+ K
Sbjct: 401 LINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNC 460
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D ++Y ++ C A E L M ++G+ +VTY+ ++N G+ A
Sbjct: 461 KL--DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAA 518
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
ER+ +M G DVA ++ I YG GD E++ ELI EM + D+ + + T
Sbjct: 519 ERVLKQMTASGFVPDVAVFDSLIKG-YGAKGDTEKVLELIREMTAKDIALDSKIISTIYT 577
Query: 281 CYCKN 285
C N
Sbjct: 578 CLVAN 582
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 162/365 (44%), Gaps = 39/365 (10%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDI 81
A +++ + + +++E D KAL I+ S + YA+ L + +L + +F
Sbjct: 39 AKTVTPTHVQQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLA 98
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYG--------------------------------- 108
ETL++ K + E L ++ R+YG
Sbjct: 99 ETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAI 158
Query: 109 --QAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLS 165
+ A R + M ++G P +V S N L+ A C S DK LF + +
Sbjct: 159 LVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSN-HGCE 217
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +YG L+ C S +A ELL EME KG + VTYT++++ L + N +EA RL
Sbjct: 218 PDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRL 277
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M+ K ++ +V Y+ + G R +++++ M L+P+ ISY+ L+ C
Sbjct: 278 LEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCN 337
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++EA ++++ ++ G P+A + + LC F +A E V+ P+ T
Sbjct: 338 EGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRIT 397
Query: 345 VKLLV 349
L V
Sbjct: 398 WSLHV 402
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
++ + ++M++ + T +Y +VL L ++ + A R + +M K G+ V + NV I
Sbjct: 133 SIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIK 192
Query: 247 N--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G ++ L M + G +PD+ +Y L+ C+ + EAK++ + +E GCS
Sbjct: 193 AFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCS 252
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ + I+ LC N D+A ++ ++ + P+ T L++G K A+ +
Sbjct: 253 PSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDI 312
Query: 365 IR-TIKKKFPPNVL 377
+ I+K+ PN++
Sbjct: 313 LELMIQKRLRPNMI 326
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 117/261 (44%), Gaps = 13/261 (4%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A +M+ G SV+++ +++ + D+ L +++ K N+ P+ +Y L+
Sbjct: 239 AKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDK-NIEPNVFTYSSLM 297
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C +G S +A ++L M K + ++Y+T+LN L +G EA ++ M+ +G
Sbjct: 298 DGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFK 357
Query: 236 LDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISY-------NFLMTCYCKN 285
D Y +I N D R +E +DEM G+KP+ I++ N ++ C
Sbjct: 358 PDAGLYG-KIVNCLC-DVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTI 415
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+ A ++Y + G S TF + + C + K ++ E V+ IP
Sbjct: 416 NNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMW 475
Query: 346 KLLVEGLVKKKKIKEAKGVIR 366
+V ++K +A +++
Sbjct: 476 STMVNCFCDERKACDAMKLLQ 496
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 141/326 (43%), Gaps = 12/326 (3%)
Query: 18 GSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
G T +S++V K+ ++ DKA+ ++ ++S H P S Y + L + +
Sbjct: 179 GIPPTVTSLNVL-IKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGT--LINGLCRFRS 235
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+ + L++ + ++I Q D AMR + M + +V ++++
Sbjct: 236 IVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSS 295
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
L+ ++ + + + + +K L P+ ISY LL C+ G ++ALE+ + M+ +
Sbjct: 296 LMDGFCKTGHSSRARDILELMIQK-RLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQ 354
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY--NVRITN--TYG--- 250
G + Y ++NCL +EA EM G+ + + +VR N +G
Sbjct: 355 GFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCT 414
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ R +L + G+ ++N L+ C+C + + + ++ + + NGC P
Sbjct: 415 INNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEM 474
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVM 335
+ T + C A K+ + +M
Sbjct: 475 WSTMVNCFCDERKACDAMKLLQLQLM 500
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 162/356 (45%), Gaps = 31/356 (8%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ + S + K P + Y + L K++R S+ L+E I
Sbjct: 98 DEAVALLSKMRKK-CVPTAVTYNS--LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYT 154
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI + ++ D A+R F+Q+ G V++++ L+ C RL + + LF + K
Sbjct: 155 TLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAID-LFGRMIK 213
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ ++Y L+ C G D+A+ LL M G VTYTT++N K +
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKE---LIDEMRDAGLKPDTISY 275
+A L ++M +KG+ DV + T+ G RL + ++ EMR P +Y
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTF----TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 329
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ YC+ ++EA+K LEE C PN +F I LC +A ++ +E+
Sbjct: 330 NTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARR 387
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVP 391
PD +++GL ++KK+ EA R ++K+ EE G +P
Sbjct: 388 RRCNPDVVMYTTVIDGLCREKKVDEA---------------CRVYRKMLEEPGCLP 428
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 11/267 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + + G D AM ++M E G+ V+++ L+ C +RL D +L +++ +
Sbjct: 226 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL-NQMTR 284
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L+PD +++ L+ C A+ +L EM K T TY T+L+ + E
Sbjct: 285 K-GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
EA + +E+ +V ++N+ I + EL++E R PD + Y ++
Sbjct: 344 EARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401
Query: 280 TCYCKNEMMDEAKKVY-EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
C+ + +DEA +VY + LEE GC PN+ T+ T + LC +G D+A ++
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGC---- 457
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+P+ T LL++ K + ++A+ ++
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELL 484
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
S D ++Y L++ C ++AL L +M +KG TYT V++ L + EA +
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 225 LWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
EM + + +V Y V I GG + L+ +MR + P ++YN L++ C
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLC 126
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K E EA + E + +GC P+ T+ T I C S D A +VF++ V PD
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 344 TVKLLVEGLVKKKKIKEA 361
T L++GL K+ ++KEA
Sbjct: 187 TYSCLIDGLCKEGRLKEA 204
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 10/241 (4%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C RL + L + K ++ PD +Y ++ + C +A + L EM N+ +
Sbjct: 22 CKVKRLEQALIFLGKMVSKGFH--PDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTP 79
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE--- 258
VTYT +++ L K G +EA L S+M KK V V YN I+ ER E
Sbjct: 80 NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNSLISGLC--KAERASEAYD 136
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L++EM +G PD +Y L+T +CK++ D+A +V+E L G P+ T+ I LC
Sbjct: 137 LLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLC 196
Query: 319 GSGNFDKAYKVFKESVMVHK-IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
G +A +F + +P+ T L+ G + K+ EA ++ R + P+V
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDV 256
Query: 377 L 377
+
Sbjct: 257 V 257
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y L+ CK + +++A + G P+ T+ I+ LC +A K
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+E + P+ T +L++GL K ++ EA ++ ++KK P +
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV 116
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 138/280 (49%), Gaps = 4/280 (1%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L L+ + Q A M + G +V ++N LL R+ + K L E+
Sbjct: 110 LSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM- 168
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ +L PD +SY +++ C+ +KAL+L NEM+ G + VT+ +++ K G
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA L EM+ KG++ D+ Y I G+ +R K L DE+ + G P I+YN L
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + EA +++E + E G PN T+ I LCG G +A ++ + +
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
P+ T +++ L K + +A ++ +KK+ P N+
Sbjct: 349 EPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNI 388
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 149/333 (44%), Gaps = 10/333 (3%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
E D KAL + V + SP + Y + +R K R + + E
Sbjct: 261 GELDRGKAL--FDEVLERGDSPCAITY--NTLIRGFCKLGRLKEASEIFEFMMERGVRPN 316
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILF 155
LI G A++ + M + +V+++N ++ C S + D + I+
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV- 375
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM--ENKGVEVTTVTYTTVLNCL 213
E+ KK PD I+Y LL C G D+A +LL M ++ + +++ +++ L
Sbjct: 376 -ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGL 434
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDT 272
K +A ++ + +K D+ N+ + +T GD + EL ++ ++ + P++
Sbjct: 435 CKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNS 494
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+Y ++ +CK M++ AK + + + P+ + + LC G D+A+++F+E
Sbjct: 495 DTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEE 554
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD + ++++G +K IK A+ ++
Sbjct: 555 MQRDDSFPDVISFNIMIDGSLKAGDIKSAESLL 587
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 41/308 (13%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-- 123
++ + +L K +D ++E K +L+ G D A + M
Sbjct: 356 NIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLK 415
Query: 124 DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
D T VISFNAL+ C +RL+ + I +D + +K + D ++ +LL S SG
Sbjct: 416 DSSYTDPDVISFNALIHGLCKGNRLHQALDI-YDLLVEKLG-AGDIVTTNILLNSTLKSG 473
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVL-------------------------------N 211
+KA+EL ++ N + + TYTT++ N
Sbjct: 474 DVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYN 533
Query: 212 CLY----KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDA 266
CL K+G ++A RL+ EM++ DV ++N+ I + GD + + L+ M A
Sbjct: 534 CLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHA 593
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
GL PD +Y+ L+ + K +DEA ++ + ++G P+A + + + G DK
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 327 YKVFKESV 334
+ K+ V
Sbjct: 654 TEFVKKLV 661
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKEL 259
+ V+ + +L C + A + + M K+G +V YN+ + + + L
Sbjct: 105 INFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSL 164
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+ EMR L PD +SYN ++ +C+ + +++A ++ ++ +GCS + T+ I C
Sbjct: 165 LREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCK 224
Query: 320 SGNFDKAYKVFKESVMVHK 338
+G D+A + KE M HK
Sbjct: 225 AGKMDEAMGLLKE--MKHK 241
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 4/171 (2%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L P Y LL S C G+ D+A L EM+ +++ +++ K G+ + AE
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAE 584
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDT-ISYNFLMT 280
L M G+ D+ Y+ ++ N + G + D+M D+G +PD I + L
Sbjct: 585 SLLVGMSHAGLSPDLFTYS-KLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKY 643
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
C + E + V + ++++ T Y SGN D A ++ +
Sbjct: 644 CISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLR 694
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 155/334 (46%), Gaps = 9/334 (2%)
Query: 39 FDPDKALDIYSSVSKHYASPVSSRYAQDLT-----VRRLAKSKRFSDIETLI-ESHKNDP 92
FD L++ S Y + Y D+ + RL K + ++ + L E K
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+ T + LI Y ++G D R M E V +++ L+ + D
Sbjct: 257 RPTVVSF-NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LF E+ + L P+ +++ L+ HC +G +D +E+ +M KGV+ +TY T++N
Sbjct: 316 KLFLEMCDR-GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPD 271
L K G+ EA++L EM ++G+ D Y + I GD E E+ EM G++ D
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+++ L++ +C+ + EA++ + E G P+ T+ I+ C G+ +K+ K
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
E +P T +L+ GL K+ ++K A ++
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLL 528
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +Y +G F A++ F + + S L + L ++EI
Sbjct: 161 LMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEI-LDC 219
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + +L+ C ++A L E+ +G+ T V++ T++N K GN ++
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL M + V DV Y+V I G + +L EM D GL P+ +++ L+
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C D ++Y+ + G P+ T+ T I LC G+ +A K+ E PD
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L++G K+ ++ A
Sbjct: 400 KFTYTMLIDGCCKEGDLESA 419
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
GT +S + F+ L+ A T S + F + +K+NL S G L +
Sbjct: 150 GTHQSNLVFSVLMNAYTDSGYFSDAIQCF-RLVRKHNLQIPFHSCGYLFDRLMKLNLTSP 208
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A E+ + G + +++ L K+ EA+ L+ E+ K+G+ V ++N I
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLI- 267
Query: 247 NTY--GGDPE---RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
N Y G+ + RLK + E R + PD +Y+ L+ CK +D+A K++ + +
Sbjct: 268 NGYCKSGNLDQGFRLKRFMMENR---VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR 324
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G PN TF T I C +G D +++++ + PD T L+ GL K ++EA
Sbjct: 325 GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384
Query: 362 KG-VIRTIKKKFPPN 375
K VI ++ P+
Sbjct: 385 KKLVIEMTQRGLKPD 399
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGD 252
+E +G + + ++ ++N G +A + + + K +N++I ++ G
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK---------HNLQIPFHSCGYL 196
Query: 253 PERLKEL---------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+RL +L +E+ D G PD +N LM CK ++EA+ ++ + + G
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEA- 361
P +F T I C SGN D+ +++ K +M +++ PD T +L+ GL K+ ++ +A
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 362 KGVIRTIKKKFPPN 375
K + + PN
Sbjct: 316 KLFLEMCDRGLVPN 329
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G + A+ +M + G ++F AL+ C ++ + L + + +
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML--E 463
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y +++ C G +LL EM+ G VTY +LN L KQG +
Sbjct: 464 AGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKN 523
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNT 248
A L M GV D YN+ + T
Sbjct: 524 ANMLLDAMLNLGVVPDDITYNILLERT 550
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 2/241 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD M G +V+S+N L+ + + DK LF+E+ ++ L P+ ++Y
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQ-ELIPNTMTYS 340
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C G A+ L NEM G VTY+ +L+ L K EA L +E
Sbjct: 341 TLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGS 400
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+D DV YN+ I GD E ++L + GL+PD ++N ++ CK ++DEA
Sbjct: 401 NLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEA 460
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K++ ++ENGC N T+ T L + +A ++ +E + D +T LLV+
Sbjct: 461 SKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKM 520
Query: 352 L 352
L
Sbjct: 521 L 521
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R G A+ FD+M G +V+++ L+ + R + LF E+ K
Sbjct: 132 LVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK- 190
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ + C+ LLNEM + V+ V++ L K+G EA
Sbjct: 191 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEA 250
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M + GV+ DV Y + + + + ++ D M G + +SYN L+
Sbjct: 251 HDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLING 310
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +D+A ++E + PN T+ T I+ LC G A +F E V +IP+
Sbjct: 311 YCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPN 370
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
T +L++ L K ++ EA +++ I+ P+V
Sbjct: 371 LVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 169/360 (46%), Gaps = 17/360 (4%)
Query: 13 ATTAAGSSTTASSIS---VSKAKSKLRSE---FDP-DKALDIYSSVSKHYASPVSSRYAQ 65
A+++ GS T S+ +S +++ +S+ F+ D AL + + + P +A+
Sbjct: 2 ASSSPGSGTCMLSLPPHFLSSSQNNFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAK 61
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDP-KITQEPY-LCNLIRSYGQAGMFDHAMRTFDQM 123
LT +AK K +S + +L S K D I + Y L +I S+ D A+ ++
Sbjct: 62 LLT--SIAKMKHYSTVLSL--SKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKI 117
Query: 124 DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+LG +F L+ C ++ + + + FD++ + P+ ++YG L+ C
Sbjct: 118 LKLGHQPDTATFTTLVRGLCVVGKIGEALDV-FDKMVGE-GFQPNVVTYGTLMNGLCKDR 175
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+AL L +EM KG+ TY ++++ L + L +EM K + +V + N
Sbjct: 176 QLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLN 235
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ + G +++D M G++PD ++Y LM +C MDEA KV++ + N
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN 295
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC N ++ T I C DKA +F+E IP+ T L+ GL ++++A
Sbjct: 296 GCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 123/269 (45%), Gaps = 11/269 (4%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
LCNL + H ++M + +V+S N ++ A C ++ + ++ ++
Sbjct: 206 LCNLCE-------WKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVV--DM 256
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ + PD ++Y L+ HC D+A+++ + M G V+Y T++N K
Sbjct: 257 MIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQR 316
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++A L+ EM ++ + + Y+ I + G + L +EM G P+ ++Y+
Sbjct: 317 IDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSI 376
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CKN + EA + + +E + P+ + I +C +G+ + A +F
Sbjct: 377 LLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG 436
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T +++ GL K+ + EA + R
Sbjct: 437 LQPDVWTHNIMIRGLCKRGLLDEASKLFR 465
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 124/265 (46%), Gaps = 7/265 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ F +M G + ++N+L+ A + V L +E+ K + P+ +S +++
Sbjct: 180 ALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKS-KIMPNVVSLNIVV 238
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G +A ++++ M GVE VTY +++ + +EA +++ M + G
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298
Query: 236 LDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+V +YN I N Y +R+ + L +EM L P+T++Y+ L+ C + +A
Sbjct: 299 CNVVSYNTLI-NGYC-KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ + G PN T+ + +LC + +A + K + PD + ++G+
Sbjct: 357 ALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416
Query: 353 VKKKKIKEAKGVIRTIK-KKFPPNV 376
+ ++ A+ + + + P+V
Sbjct: 417 CRAGDLEAARDLFSNLAPRGLQPDV 441
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 161/314 (51%), Gaps = 7/314 (2%)
Query: 67 LTVRRLAKSKRFSDI-ETLIESHK-NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
+ V L S++F+ + + LIE + +D +I QE + + RSY +A + A+R FD+M
Sbjct: 117 ILVNILGTSRQFAILWDFLIEMRESHDFEINQE-IIWLVFRSYSRANLPSDAIRAFDRMA 175
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
E G SV + LL+ + + FD + K+ +Y +L++ D G +
Sbjct: 176 EFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAK--TYSILVRGWGDIGEA 233
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+A ++ +EM +G + + Y ++L L K GN +EA +++ E+ GV+ D +Y +
Sbjct: 234 VEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIF 293
Query: 245 I-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I + + ++D M+ L P+ +YN ++ CKN +++A ++ + E G
Sbjct: 294 IRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGV 353
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
SP+A ++ T + + C ++A K+ V + +PD ++ +L++ LV+ + A
Sbjct: 354 SPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATE 413
Query: 364 VIRTI-KKKFPPNV 376
+ ++ ++ F P+V
Sbjct: 414 IWESMGERGFYPSV 427
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/247 (19%), Positives = 111/247 (44%), Gaps = 4/247 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G S S++ L+ SR + + E+ + ++ ++ L+ +S+ +
Sbjct: 107 GFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSD 166
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ + M G+ + +L L K + + A++ + ++ K + Y++ +
Sbjct: 167 AIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK-FEAKAKTYSI-LV 224
Query: 247 NTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+G G+ +++ DEMR G D ++YN L+ CK +DEA K++ + +G
Sbjct: 225 RGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVE 284
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+A ++ +I C + N + V +P+ T +++ L K K+++A +
Sbjct: 285 PDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQL 344
Query: 365 IRTIKKK 371
+ + ++
Sbjct: 345 LHEMMER 351
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y +AG+ A+ F++M++ I+F+ L+ R R + FD + K+
Sbjct: 183 LIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKF 242
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I Y L++ C +G+ +A + EM+ G TYT V++ L + G A
Sbjct: 243 --EPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRA 300
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++EM G + + +N + + G E++ ++ ++M+ G PDT++YNFL+
Sbjct: 301 HDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIES 360
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+CK+ +DEA KV + + GCSPNA+TF
Sbjct: 361 HCKDGNLDEALKVLNSMVKKGCSPNASTF 389
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 15/280 (5%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+ A + + L + +R ++ ++ +S K+ +P + NL+R + +AG A R
Sbjct: 212 KIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVI---VYTNLVRGWCRAGNIPEAERV 268
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F +M G +V ++ ++ A R + +F E+ P+ I++ LL+ H
Sbjct: 269 FTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEM-LDVGCEPNSITFNNLLRVHV 327
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G ++K L++ N+M+ G TVTY ++ K GN +EA ++ + M KKG + +
Sbjct: 328 KAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNAS 387
Query: 240 AYNVRITNTYGG-----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+N +G D L +M++ K +T++YN LM + + D K+
Sbjct: 388 TFN----GLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKL 443
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ ++E+ PN T+ I CG G+++ AYK F+E V
Sbjct: 444 KKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMV 483
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 130/281 (46%), Gaps = 4/281 (1%)
Query: 92 PKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
P T P N +I G+ FD + D M S+ +F+ L+ R+ L +
Sbjct: 136 PGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASE 195
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
F+ + + YN PDKI++ +L+ C + +A + +++K E + YT ++
Sbjct: 196 AVHAFNRM-EDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLV 253
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
+ GN EAER+++EM+ G +V Y + I G R ++ EM D G +
Sbjct: 254 RGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCE 313
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P++I++N L+ + K ++ +VY ++ GC P+ T+ I C GN D+A KV
Sbjct: 314 PNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKV 373
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
V P+ +T L + K + + A + +K+
Sbjct: 374 LNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKE 414
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 142/288 (49%), Gaps = 6/288 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + G D A ++M G + + FN L+ A C R+ + V I F E+P+K
Sbjct: 424 LVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI-FREMPRK 482
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++ L+ C+ AL LL +M ++GV TVTY T++N ++G +E
Sbjct: 483 -GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 541
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L +EM +G LD YN I G+ ++ + L ++M GL P +IS N L+
Sbjct: 542 ARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILIN 601
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C++ M++EA + + + G +P+ TF + I LC +G + +F++ P
Sbjct: 602 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 661
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKKVEEEL 387
D T L+ L K + +A ++ I+ F PN R W + + L
Sbjct: 662 DTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPND-RTWSILLQSL 708
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 139/315 (44%), Gaps = 15/315 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ +L + F I+ L+ K++ + +E +++R Y +AG R +M + +
Sbjct: 112 IGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS 171
Query: 129 PRSVI-SFNALLFACTRSRLYDKVP-ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
S+N +L + + +D + +K + P ++G+++K+ C D
Sbjct: 172 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK--IPPTLFTFGVVMKALCAVNEVDS 229
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL +L +M G +V Y T+++ L K EA +L EM G D +N I
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
D R+ E +++ M G PD I+Y +LM CK +D AK ++ + +
Sbjct: 290 GLCKFD--RINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK--- 344
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAK 362
P + F T I+ G D A V + V + I PD T L+ G KK + A
Sbjct: 345 -PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLAL 403
Query: 363 GVIRTIKKK-FPPNV 376
V+R ++ K PNV
Sbjct: 404 EVLRDMRNKGCKPNV 418
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 9/267 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN-ALLFACTRSRLYDKVPILFDEIPKK 161
LI S + + A++ ++M +G +FN +L C R+ + ++ + +
Sbjct: 252 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 311
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +PD I+YG L+ C G D A +L + T+V + T+++ G ++
Sbjct: 312 F--TPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP----TSVIFNTLIHGFVTHGRLDD 365
Query: 222 AERLWSEM-EKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLM 279
A+ + S+M G+ DV YN I + L E++ +MR+ G KP+ SY L+
Sbjct: 366 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILV 425
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+CK +DEA + + +G PN F I C +A ++F+E
Sbjct: 426 DGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 485
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T L+ GL + +IK A ++R
Sbjct: 486 PDVYTFNSLISGLCEVDEIKHALWLLR 512
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 142/326 (43%), Gaps = 9/326 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL + ++KH P S Y + L+K R ++ L+E +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQT--LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 285
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + A + ++M G I++ L+ + D LF IPK
Sbjct: 286 DVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 344
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAE 220
P + + L+ G D A +L++M + G+ TY +++ +K+G
Sbjct: 345 ----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVG 400
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + +M KG +V +Y + + G + L++EM GLKP+T+ +N L+
Sbjct: 401 LALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLI 460
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ +CK + EA +++ + GC P+ TF + I LC A + ++ + +
Sbjct: 461 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 520
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T L+ +++ +IKEA+ ++
Sbjct: 521 ANTVTYNTLINAFLRRGEIKEARKLV 546
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + HA+ M G + +++N L+ A R + L +E+ +
Sbjct: 493 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 552
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+L D+I+Y L+K C +G DKA L +M G+ ++++ ++N L + G EE
Sbjct: 553 GSLL-DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEE 611
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A EM +G D+ +N I G E + +++ G+ PDT++YN LM+
Sbjct: 612 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMS 671
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
CK + +A + + E+G PN RTW
Sbjct: 672 WLCKGGFVYDACLLLDEGIEDGFVPND---RTW 701
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 3/208 (1%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ +G LL +M+++G+ + +++ K G + RL EM
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 167
Query: 231 K-KGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ +YNV + G+ ++ + +M + P ++ +M C +
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
D A V + ++GC PN+ ++T I+ L ++A ++ +E ++ +PD T +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 287
Query: 349 VEGLVKKKKIKE-AKGVIRTIKKKFPPN 375
+ GL K +I E AK V R + + F P+
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPD 315
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 162/335 (48%), Gaps = 10/335 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP--- 98
D A+ ++ + K + P+ S + + + +AK K+F + +L K K+ EP
Sbjct: 24 DDAIGLFGGMVK--SRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKM-MKLGYEPSIV 80
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L +L+ Y A+ DQM E+G I+F L+ + L D +
Sbjct: 81 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
++ P+ ++YG+++ C G D A LLN+ME +E V + T+++ L K +
Sbjct: 141 VQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYGGDPERLKELIDEMRDAGLKPDTISYN 276
++A L+ EME KG+ +V Y+ I+ +YG + +L+ +M + + P+ +++N
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA-SQLLSDMIEKKINPNLVTFN 258
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ + K EA+K+++ + + P+ T+ + I C DKA ++F+ V
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD +T L++G K K++++ + R + +
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 353
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 151/331 (45%), Gaps = 8/331 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL+++ + P Y+ + L R+SD L+ S + KI
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSS--LISCLCSYGRWSDASQLL-SDMIEKKINPNLVTF 257
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI ++ + G F A + D M + + ++N+L+ C RL DK +F+ +
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL-DKAKQMFEFMV 316
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + PD +Y L+K C S + EL EM ++G+ TVTYTT++ L+ G+
Sbjct: 317 SK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 375
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A++++ +M GV D+ Y++ + G E+ E+ D M+ + +K D Y +
Sbjct: 376 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 435
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +D+ ++ L G PN T+ T I LC +AY + K+
Sbjct: 436 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+PD T L+ ++ + +IR ++
Sbjct: 496 LPDSGTYNTLIRAHLRDGDKAASAELIREMR 526
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 5/276 (1%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
S+G+ D A+ F M + S+ FN LL A + + +D V I + K L
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV-ISLALLGKMMKLG 74
Query: 166 --PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
P ++ LL +C A+ L+++M G T+T+TT+++ L+ A EA
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L M ++G ++ Y V + GD + L+++M A ++ D + +N ++
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK +D+A +++ +E G PN T+ + I LC G + A ++ + + P+
Sbjct: 195 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 254
Query: 343 NTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L++ VK+ K EA+ + IK+ P++
Sbjct: 255 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 290
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 134/283 (47%), Gaps = 5/283 (1%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P + L + + SYG+ + A + M E ++++FNAL+ A + + +
Sbjct: 217 PNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
L D++ K+ ++ PD +Y L+ C DKA ++ M +K TY T++
Sbjct: 274 EKLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 332
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
K E+ L+ EM +G+ D Y I + GD + +++ +M G+ P
Sbjct: 333 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 392
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y+ L+ C N +++A +V++ ++++ + + T I +C +G D + +F
Sbjct: 393 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 452
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+ P+ T ++ GL K+ ++EA +++ +K+ P
Sbjct: 453 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 495
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 124/252 (49%), Gaps = 7/252 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y G +A + F M ++G +V S+N ++ + + D+ L E+ K
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK- 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ PD ++Y L+ C SG AL L+NEM ++G VTYT++L+ L K N ++A
Sbjct: 320 NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKA 379
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M+++G+ + Y I GG + +EL + G D +Y +++
Sbjct: 380 TALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISG 439
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--- 338
CK M DEA + +E+NGC PNA TF I L DKA K+ E M+ K
Sbjct: 440 LCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHE--MIAKGLL 497
Query: 339 IPDFNTVKLLVE 350
+ DF + V+
Sbjct: 498 VLDFKVADVFVQ 509
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A++ +++ T +V+ +N ++ + +L ++ L+ E+ + + PD I+Y L+
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR-GIFPDAITYTTLI 192
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G A LL+EM K + Y ++N L K+GN +EA+ L + M K+G+
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
V Y+ + G+ + K++ M G+ P+ SYN ++ CK + +DEA +
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 312
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ P+ T+ + I LC SG A + E + D T L++ L K
Sbjct: 313 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 372
Query: 355 KKKIKEAKGVIRTIKKK 371
+ + +A + +K++
Sbjct: 373 NQNLDKATALFMKMKER 389
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 127/312 (40%), Gaps = 45/312 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G + ++ +LG I+ N L+ C + + K + F +
Sbjct: 51 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEV--KKSLHFHDKVVA 108
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
D +SYG LL C G + A++LL +E++ V Y T+++ L K E
Sbjct: 109 QGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNE 168
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG------------------------------- 250
A L+SEM+ +G+ D Y I YG
Sbjct: 169 AYDLYSEMDARGIFPDAITYTTLI---YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNI 225
Query: 251 --------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
G+ + K L+ M G+KP ++Y+ LM YC + AK+++ + + G
Sbjct: 226 LINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+PN ++ I LC D+A + +E + + +PD T L++GL K +I A
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345
Query: 363 GVIRTIKKKFPP 374
++ + + P
Sbjct: 346 NLMNEMHHRGQP 357
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
+ + A + +MD G I++ L++ C +L +L + I K N++P
Sbjct: 165 LVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILK--NINPGVYI 222
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ + C G+ +A LL M +G++ VTY+T+++ G + A++++ M
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282
Query: 231 KKGVDLDVAAYNVRI---------------------------TNTYG---------GDPE 254
+ GV+ +V +YN+ I T TY G
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 342
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
L++EM G D ++Y L+ CKN+ +D+A ++ ++E G P T+ I
Sbjct: 343 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 402
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
LC G A ++F+ ++ D T +++ GL K+ EA +
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 452
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 117/248 (47%), Gaps = 3/248 (1%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+I FN +L + + + Y L ++ K + + ++ +L+ C G + +L
Sbjct: 10 IIEFNKILGSLAKMKQYLTAISLSKQMEVK-GIRANFVTLNILINCFCHLGQMAFSFSVL 68
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
++ G + T+T T++ L +G +++ ++ +G +D +Y +
Sbjct: 69 GKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKI 128
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ +L+ + D +P+ + YN ++ CK+++++EA +Y ++ G P+A T+
Sbjct: 129 GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITY 188
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T IY C G A+ + E ++ + P +L+ L K+ +KEAK ++ + K
Sbjct: 189 TTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTK 248
Query: 371 K-FPPNVL 377
+ P V+
Sbjct: 249 EGIKPGVV 256
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
A I+ ++ + +P + Y+ ++ + L K KR + L+ + + +L
Sbjct: 274 AKQIFHAMVQMGVNP--NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 331
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I ++G A+ ++M G P V+++ +LL A +++ DK LF ++ K+
Sbjct: 332 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERG 390
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P +Y L+ C G A EL + KG + TYT +++ L K+G +EA
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
+ S+ME G + + + I + + D ++ ++L+ EM GL
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 139/275 (50%), Gaps = 12/275 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI YG +G A + F++M E G + F +++ + C + + LFDE+ ++
Sbjct: 291 LIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNM-KRAFALFDELNER 349
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L + +YG L+ C+SG D A L+NEM+++G+++ V + T++N K+G +E
Sbjct: 350 -GLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDE 408
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-----DPERLKELIDEMRDAGLKPDTISYN 276
A R+ MEKKG + D+ YN GG E K + M + G+ P+ +S+
Sbjct: 409 ALRMQDVMEKKGFENDIFTYN----TIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFT 464
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ +CK + EA++V++ +++ G PN T+ T I G +AY++ E +
Sbjct: 465 IMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESI 524
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T LV G K++EA ++ + +K
Sbjct: 525 GMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRK 559
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 15/300 (5%)
Query: 79 SDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
SD +LI++ ++PK ++ LC+ L R Y MF+ + FD M G S
Sbjct: 128 SDFVSLIDNRFHEPKFVEK--LCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIV 185
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL--LLKSHCDSGSSDKALELLNEME 195
L A RS D++ + K D Y + ++ C G ++A +L+ EM
Sbjct: 186 CLLALKRS---DQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMT 242
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDP 253
KG++ VTY T++N K + E + ME V + A Y + I YG G
Sbjct: 243 GKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLI-EWYGSSGKI 301
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+++ ++M + G++ D + +++ CK M A +++ L E G NA T+
Sbjct: 302 AEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGAL 361
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL--LVEGLVKKKKIKEAKGVIRTIKKK 371
I+ C SG D A + E M + D N V L+ G KK I EA + ++KK
Sbjct: 362 IHGTCNSGQLDAAEMLVNE--MQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKK 419
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 2/253 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G D A ++M G +++ FN L+ + + D+ + D + KK
Sbjct: 361 LIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKK- 419
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D +Y + C ++A L M KGV+ V++T +++ K+GN EA
Sbjct: 420 GFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEA 479
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
ER++ +M+KKG +V YN I + G + L DEM G+ D +Y L+
Sbjct: 480 ERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHG 539
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C ++EA + + G + + T+ I L G ++A++++ E + PD
Sbjct: 540 ECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPD 599
Query: 342 FNTVKLLVEGLVK 354
LV L K
Sbjct: 600 DRVYTSLVANLHK 612
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 155/334 (46%), Gaps = 9/334 (2%)
Query: 39 FDPDKALDIYSSVSKHYASPVSSRYAQDLT-----VRRLAKSKRFSDIETLI-ESHKNDP 92
FD L++ S Y + Y D+ + RL K + ++ + L E K
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+ T + LI Y ++G D R M E V +++ L+ + D
Sbjct: 257 RPTVVSF-NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LF E+ + L P+ +++ L+ HC +G +D +E+ +M KGV+ +TY T++N
Sbjct: 316 KLFLEMCDR-GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLING 374
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPD 271
L K G+ EA++L EM ++G+ D Y + I GD E E+ EM G++ D
Sbjct: 375 LCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+++ L++ +C+ + EA++ + E G P+ T+ I+ C G+ +K+ K
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
E +P T +L+ GL K+ ++K A ++
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLL 528
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 5/301 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
+ + + L K + D L + + + LI + G D M + Q
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G VI++N L+ + + L E+ ++ L PDK +Y +L+ C G
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDGCCKEG 414
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ ALE+ EM +G+E+ V +T +++ ++G EAER EM + G+ D A Y
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I GD + +L+ EM+ G P ++YN L+ CK M A + + +
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNL 534
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ T+ + C GN + K+ E +V D+ + L+ L K K ++
Sbjct: 535 GVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQ---DYGSYTSLIGDLRKTCKERQK 591
Query: 362 K 362
+
Sbjct: 592 R 592
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +Y +G F A++ F + + S L + L ++EI
Sbjct: 161 LMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEI-LDC 219
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + +L+ C ++A L E+ +G+ T V++ T++N K GN ++
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL M + V DV Y+V I G + +L EM D GL P+ +++ L+
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C D ++Y+ + G P+ T+ T I LC G+ +A K+ E PD
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L++G K+ ++ A
Sbjct: 400 KFTYTMLIDGCCKEGDLESA 419
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
GT +S + F+ L+ A T S + F + +K+NL S G L +
Sbjct: 150 GTHQSNLVFSVLMNAYTDSGYFSDAIQCF-RLVRKHNLQIPFHSCGYLFDRLMKLNLTSP 208
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A E+ + G + +++ L K+ EA+ L+ E+ K+G+ V ++N I
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLI- 267
Query: 247 NTY--GGDPE---RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
N Y G+ + RLK + E R + PD +Y+ L+ CK +D+A K++ + +
Sbjct: 268 NGYCKSGNLDQGFRLKRFMMENR---VFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR 324
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G PN TF T I C +G D +++++ + PD T L+ GL K ++EA
Sbjct: 325 GLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREA 384
Query: 362 KG-VIRTIKKKFPPN 375
K VI ++ P+
Sbjct: 385 KKLVIEMTQRGLKPD 399
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGD 252
+E +G + + ++ ++N G +A + + + K +N++I ++ G
Sbjct: 146 LEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK---------HNLQIPFHSCGYL 196
Query: 253 PERLKEL---------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+RL +L +E+ D G PD +N LM CK ++EA+ ++ + + G
Sbjct: 197 FDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGL 256
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEA- 361
P +F T I C SGN D+ +++ K +M +++ PD T +L+ GL K+ ++ +A
Sbjct: 257 RPTVVSFNTLINGYCKSGNLDQGFRL-KRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 362 KGVIRTIKKKFPPN 375
K + + PN
Sbjct: 316 KLFLEMCDRGLVPN 329
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y + G D A M G ++IS+N ++ R + + +E+ K
Sbjct: 51 LIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK- 109
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD+++Y LL +C G+ +AL + EM GV + VTYT ++N + K N A
Sbjct: 110 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M +G+ + Y I + G +++EM ++G P ++YN +
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C E M+EA V + + E G +P+ ++ T I C G D+A+++ +E V PD
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 289
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T L++GL + +++ EA
Sbjct: 290 AVTYSSLIQGLCEMRRLTEA 309
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 157/326 (48%), Gaps = 12/326 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A + S+S P Y ++ + L + + ++E E
Sbjct: 62 DEAFGLLKSMSSKGMQPNLISY--NVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ Y + G F A+ +M G SV+++ AL+ + ++R ++ FD++ +
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM-RI 178
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CLYKQGNA 219
L P++ +Y L+ G ++A +LNEM G + VTY ++ C+ ++
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER--M 236
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
EEA + EM +KG+ DV +Y+ I+ G+ +R ++ EM + G+ PD ++Y+ L
Sbjct: 237 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 296
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+ + EA + + + + G P+ T+ T I C G+ +KA + E M+HK
Sbjct: 297 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDE--MIHK 354
Query: 339 --IPDFNTVKLLVEGLVKKKKIKEAK 362
+PD T +L+ GL K+ + +EAK
Sbjct: 355 GFLPDAVTYSVLINGLNKQARTREAK 380
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 155/380 (40%), Gaps = 66/380 (17%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLT----VRRLAKSKRFSDIETLIESHKNDPKITQEP 98
+AL I++ + ++ SP Y + R L ++ F D + N+ T
Sbjct: 133 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT--- 189
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
LI + + G+ + A R ++M E G SV+++NA + C R+ + + ++ +
Sbjct: 190 ---TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K L+PD +SY ++ C G D+A ++ EM KGV VTY++++ L +
Sbjct: 247 VEK--GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISY 275
EA L EM G+ D Y I N Y GD + L DEM G PD ++Y
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLI-NAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363
Query: 276 NFLMT------------------------------------C--------------YCKN 285
+ L+ C +C
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 423
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+M EA +V+E + E P + I+ C GN KA+ ++KE + +P TV
Sbjct: 424 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTV 483
Query: 346 KLLVEGLVKKKKIKEAKGVI 365
L++ L K+ +E VI
Sbjct: 484 ITLIKALFKEGMNEEMSEVI 503
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 11/238 (4%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+SP+ +Y +L++ C G K L EME G VTY T+++ K G +EA
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 224 RLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L M KG+ ++ +YNV I G + E+++EM G PD ++YN L+ Y
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK +A ++ + NG SP+ T+ I +C + N ++A + F + + P+
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVLR---------AWKKVEEELGLV 390
T L++G ++ + EA ++ + + F P+V+ +++EE LG+V
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+V ++N L+ C+ L + F E+ + L P+ ++Y L+ ++C G D+A
Sbjct: 9 NVYTYNILIRGFCSVGELQKGLGC-FGEMERNGCL-PNVVTYNTLIDAYCKMGRIDEAFG 66
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL M +KG++ ++Y ++N L ++G+ +EA + EM KG D YN + N Y
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT-LLNGY 125
Query: 250 GGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ + L+ EM G+ P ++Y L+ CK ++ A + ++ + G PN
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR- 366
T+ T I G ++AY++ E P T + G ++++EA GV++
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245
Query: 367 TIKKKFPPNVL 377
++K P+V+
Sbjct: 246 MVEKGLAPDVV 256
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 27/300 (9%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A + +M E G +++++L+ R + L E+
Sbjct: 261 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM-LDM 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD+ +Y L+ ++C G +KAL L +EM +KG VTY+ ++N L KQ EA
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379
Query: 223 ERL-WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI----------------DEMRD 265
+RL + + ++ V DV Y+ I N + + + LI + M +
Sbjct: 380 KRLLFKLIYEESVPSDVT-YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 438
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
KP YN ++ +C+ + +A +Y+ + +G P+ T T I L G ++
Sbjct: 439 RNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 498
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV--------IRTIKKKFPPNVL 377
+V +++ ++ + K+LVE K+ ++ V ++ + PP L
Sbjct: 499 MSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNKLSLKCVASSVPPGAL 558
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 117/209 (55%), Gaps = 3/209 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Y +AG+ A+ F++M++ G +++F+ ++ + + R ++ FD + K+
Sbjct: 219 LVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSL--KH 276
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + Y L+ C +G KA E+ ++M+ G++ TY+ V++ L + G A
Sbjct: 277 RFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRA 336
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++SEM G D + +N + + G E++ ++ ++M+ G DTISYNF++
Sbjct: 337 HDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIES 396
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+C++E ++EA K+ + + G +PNA+TF
Sbjct: 397 HCRDENLEEAAKILNLMVKKGVAPNASTF 425
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 149/310 (48%), Gaps = 16/310 (5%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIES--HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
A + + L K +R ++ ++ +S H+ +P + +L+ + +AG A F
Sbjct: 250 AFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVV---VYTSLVHGWCRAGDISKAEEVFS 306
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M G +V +++ ++ + R + +F E+ P+ +++ L++ H +
Sbjct: 307 DMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDA-GCDPNAVTFNSLMRVHVKA 365
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G ++K L++ N+M+ G T++Y ++ + N EEA ++ + M KKGV + + +
Sbjct: 366 GRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTF 425
Query: 242 NVRITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
N +G D + M++ +P+T++YN LM + ++ D K+ +
Sbjct: 426 NF----IFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKK 481
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKK 355
++E+ PN T+R I C +++ AYK+ E V + P+ + + ++E L K
Sbjct: 482 EMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKA 541
Query: 356 KKIKEAKGVI 365
++K+ + ++
Sbjct: 542 GQLKKHEELV 551
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 136/285 (47%), Gaps = 5/285 (1%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
+ EPY ++ G+ FD A D M G +V +F+AL+ R+ L +
Sbjct: 177 SPEPY-NEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHA 235
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+ + + Y +PD +++ +++ S C +++A + ++++ E V YT++++
Sbjct: 236 FNRM-EDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWC 293
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
+ G+ +AE ++S+M+ G+ +V Y++ I + G R ++ EM DAG P+ +
Sbjct: 294 RAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAV 353
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
++N LM + K ++ KVY ++ GC + ++ I C N ++A K+
Sbjct: 354 TFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLM 413
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
V P+ +T + + K + A + +K+ PN L
Sbjct: 414 VKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTL 458
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 119/251 (47%), Gaps = 4/251 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G P S +N +L + R +D + D + K + ++ L++ + +G + +
Sbjct: 173 GFPASPEPYNEMLDLAGKLRQFDLAWHVIDLM-KSRGVEITVHTFSALVRRYVRAGLAAE 231
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ N ME+ G V ++ V++ L K+ A EA+ + ++ + + DV Y +
Sbjct: 232 AVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVH 290
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
GD + +E+ +M+ AG+KP+ +Y+ ++ C+ + A V+ + + GC P
Sbjct: 291 GWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDP 350
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
NA TF + + +G +K KV+ + + D + ++E + + ++EA ++
Sbjct: 351 NAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKIL 410
Query: 366 R-TIKKKFPPN 375
+KK PN
Sbjct: 411 NLMVKKGVAPN 421
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++G DH T++ M G + ++ LL + +++ +++ +F + +
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ- 81
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ SY +L+ C D+A ELLNEM + G + VTY ++L+ L K G +EA
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+S M +G D YNV I + GD L +EM + G P +YN L++
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + + +++ + GC PN TF + C G+ +A+++F E + PD
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ L+ G+ K K EA+ ++R I+ P+++
Sbjct: 262 VVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 4/330 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A ++ ++ SP + ++ + + L + ++ + L+ +
Sbjct: 69 EEARSVFRGMAAQGCSP--NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + G A+ F +M G P + +N L+ ++ + LF+E+ +K
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P +Y LL G + L +M +G T+ +L+ K G+ E
Sbjct: 187 -GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL+ EM G DV +YN I G P + L+ EM +G+ PD +SYN L+
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K+ +D A K++ + ++G P+A ++ T I LC +G A+ VFK+ + P
Sbjct: 306 GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D V LV GL + +++ E+ + + + K
Sbjct: 366 DAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A R F++M E G +V ++N+LL +R + +V LF ++ ++
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ- 221
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ LL C G +A L EM + G V+Y T++ + +G EA
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEA 281
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+RL EM + GV D+ +YN+ I + G + +L E+ +GL+PD SY+ ++ C
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ + A V++ + NG +P+A + LC ++ ++F+ V +P
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
LL+ L K K+ + + + ++ F P+V
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 8/210 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
NL+ + + G A R F +M LG P V+S+N L+ C++ + ++ +L + I
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI-- 289
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + PD +SY +L+ + SG+ D A++L E+ G+E +Y+T+++CL + G
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
A ++ +M G D A + G ERL E L M P YN
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRG--ERLTESCELFQAMVKFECVPLIPEYNL 407
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
LM CK + D+ +++ L E G SP+
Sbjct: 408 LMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+SY LL+ SG D N+M G T TY +L L + EEA ++
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M +G +V +Y++ I G + EL++EM D G +P+ ++Y L++ CK
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ EA ++ + GC P+ + I G+ +AY++F+E + IP T
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 348 LVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
L+ G +K + + + + +++ PN+
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T+SYN+L+ K+ D Y + GC PN T+ + LC + F++A VF+
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
P+ + +L+ GL + +K+ EA ++ I PNV+
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVV 123
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%), Gaps = 2/269 (0%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
+Y + M + AM F++M + G V+SF AL+ A + D + F+++ + ++
Sbjct: 345 AYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINE-GVT 403
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ + L+ C G +KA EL E+ ++G+ V V + T++ L +G EA+RL
Sbjct: 404 PNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRL 463
Query: 226 WSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
M + GV +V +YN + + G + +L+D M GLKP+ +Y L+ YCK
Sbjct: 464 IDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCK 523
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+D+A ++ + G +P T+ T ++ L +G F +A +++ + D T
Sbjct: 524 ARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYT 583
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+++ GL K + EA + R + K P
Sbjct: 584 YNIILNGLCKNNFVDEAFKMFRRLCSKDP 612
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y G D M G + FN + A + + ++ +F+++ ++
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM-RQQ 365
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD +S+G L+ + C G D A+ N+M N+GV +++++ L G E+A
Sbjct: 366 GLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKA 425
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L+ E+ +G+ +D +N + N G + LID M G++P+ ISYN L+
Sbjct: 426 EELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAG 485
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C +DEA K+ + + NG PN T+ + C + D AY +F+E +M P
Sbjct: 486 HCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPV 545
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T ++ GL + + EA
Sbjct: 546 VATYNTILHGLFQTGRFSEA 565
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 4/262 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A F +M + G P +V+++ ++ ++++ D+ +F ++ +
Sbjct: 167 VINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR- 225
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y L+ + +G + +++L EM G+E +TY +L+ L K G EA
Sbjct: 226 GVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREA 285
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ M +KG+ DVA Y + + + Y G + +D M G+ P+ +N +
Sbjct: 286 RLFFDSMFRKGIKPDVAIYAI-LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFC 344
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K M++EA ++ + + G SP+ +F I LC G D A F + + P
Sbjct: 345 AYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTP 404
Query: 341 DFNTVKLLVEGLVKKKKIKEAK 362
+ LV GL K ++A+
Sbjct: 405 NIFVFSSLVYGLCTVGKWEKAE 426
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 160/373 (42%), Gaps = 13/373 (3%)
Query: 13 ATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR-YAQDLTVRR 71
+ AA + S+A+S D+AL ++ + H A P S R + Q LTV
Sbjct: 5 VSAAADRCLELERVIASRARS---GSLGLDEALKLFDEL-LHCARPASVRAFNQLLTVVS 60
Query: 72 LAKSKRFSD-IETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELG 127
A S+ + +L + P C LI + + G +H F + + G
Sbjct: 61 RAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTG 120
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+VI + LL C R+ + IL + ++ PD ++Y ++ G +K
Sbjct: 121 WRVNVIVISQLLKGLCDAKRVDEATDILLLRM-SEFGCPPDVVAYNTVINGFFREGQVEK 179
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A L EM ++G+ VTYTTV++ L K + A+ ++ +M +GV D YN I
Sbjct: 180 AYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIH 239
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + + ++++EM GL+PD I+Y L+ CKN EA+ ++ + G P
Sbjct: 240 GYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP 299
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ + ++ G + + V P+ ++ KK I+EA +
Sbjct: 300 DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIF 359
Query: 366 RTIKKK-FPPNVL 377
++++ P+V+
Sbjct: 360 NKMRQQGLSPDVV 372
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 145/331 (43%), Gaps = 6/331 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A+ I++ + + SP + + L K R D N+
Sbjct: 353 EEAMHIFNKMRQQGLSPDVVSFGA--LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFS 410
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L+ G ++ A F ++ + G + FN L+ C R+ + ++ ++
Sbjct: 411 SLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLI--DLMI 468
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + P+ ISY L+ HC +G D+A +LL+ M + G++ TYT +L K +
Sbjct: 469 RVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVD 528
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A L+ EM KGV VA YN + + G EL M ++ K D +YN ++
Sbjct: 529 DAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIIL 588
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CKN +DEA K++ L ++ TF I L G + A +F +
Sbjct: 589 NGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLV 648
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T +L+ E L+++ + E G+ ++K
Sbjct: 649 PDVVTYRLIAENLIEEGSLGEFDGLFSAMEK 679
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 43/264 (16%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
+CNL G A R D M +G +VIS+N L+ C R+ D+ L D +
Sbjct: 448 MCNLCNE----GRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRI-DEAAKLLDVM 502
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
L P++ +Y +LL+ +C + D A L EM KGV TY T+L+ L++ G
Sbjct: 503 VSN-GLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRIT----NTY------------------------- 249
EA L+ M D+ YN+ + N +
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621
Query: 250 -------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
GG E +L + GL PD ++Y + + + E ++ +E++G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681
Query: 303 CSPNATTFRTWIYHLCGSGNFDKA 326
+PN+ + L G+ +A
Sbjct: 682 TAPNSHMLNALVRRLLHRGDISRA 705
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
Q G F A + M T + ++N +L ++ D+ +F + K + D
Sbjct: 558 QTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK-DPQLDS 616
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ +++ + G + A++L + G+ VTY + L ++G+ E + L+S
Sbjct: 617 VTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSA 676
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
MEK G + N + + GD R + ++ + + + + L++ Y + E
Sbjct: 677 MEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEY 736
Query: 288 MDEAKKVYE 296
AK + E
Sbjct: 737 QPHAKSLPE 745
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 136/264 (51%), Gaps = 13/264 (4%)
Query: 121 DQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
+QMD G + + N L+ + C S ++ V +L K + PD +++ L+ C
Sbjct: 110 NQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMF--KLGIQPDSVTFTTLINGLC 167
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+ G +A+EL NEM + TVT+T +++ L K+G EA ++ M +KGV+ ++
Sbjct: 168 NEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIY 227
Query: 240 AYNVRITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
YN + N Y D ++ E+ M G P SY+ L+ YCK+ +DEAK +
Sbjct: 228 TYNA-LMNGYCLRLEMNDASKVFEI---MVGKGCAPSVHSYSILINGYCKSRRIDEAKAL 283
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ E PN T+ T + LC + + +A ++FK+ +P+ T +L++GL K
Sbjct: 284 LTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCK 343
Query: 355 KKKIKEAKGVIRTIK-KKFPPNVL 377
++EA ++ +++ +K P+++
Sbjct: 344 HGHLEEALKLLTSMQERKLEPDIV 367
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 161/328 (49%), Gaps = 6/328 (1%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
S++ + + L +E +A+++++ ++ A P + + + V L K S+ +
Sbjct: 156 SVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFT--ILVDVLCKKGMVSEARCV 213
Query: 85 IESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
E+ + + Y N L+ Y + A + F+ M G SV S++ L+
Sbjct: 214 FET-MTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYC 272
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+SR D+ L ++ +K L P+ ++Y L++ C + S +A EL +M + G+
Sbjct: 273 KSRRIDEAKALLTQMSEK-ELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNL 331
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE 262
TY+ +L+ L K G+ EEA +L + M+++ ++ D+ YN+ I + G E KEL +
Sbjct: 332 RTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSK 391
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
+ G++P +YN ++ K + DEA K++ +E++G P++ ++ I + +
Sbjct: 392 LFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQD 451
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++ E V D +T K+L++
Sbjct: 452 PSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 6/258 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
GM A F+ M E G ++ ++NAL+ C R + D + EI +P
Sbjct: 205 GMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVF--EIMVGKGCAPSVH 262
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
SY +L+ +C S D+A LL +M K + TVTY T++ L + EA+ L+ +M
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKM 322
Query: 230 EKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
G+ ++ Y++ + +G E LK L+ M++ L+PD + YN L+
Sbjct: 323 CSSGMLPNLRTYSILLDGLCKHGHLEEALK-LLTSMQERKLEPDIVLYNILIQGMFIAGK 381
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++ AK+++ L NG P+ T+ I L G D+AYK+F++ +PD + +
Sbjct: 382 LEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNV 441
Query: 348 LVEGLVKKKKIKEAKGVI 365
+++G ++ + A +I
Sbjct: 442 IIQGFLQNQDPSTAIQLI 459
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 40/267 (14%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D AM +F +M + S + L + + + Y V L +++ + ++ + + +
Sbjct: 68 DDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFGVAHNDYTLNI 126
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ S C A+ +L++M G++ +VT+TT++N L +G +EA L++EM
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG-- 184
Query: 234 VDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
RDA P+T+++ L+ CK M+ EA+
Sbjct: 185 ------------------------------RDA--MPNTVTFTILVDVLCKKGMVSEARC 212
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEG 351
V+E + E G PN T+ + C + A KVF+ +MV K P ++ +L+ G
Sbjct: 213 VFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFE--IMVGKGCAPSVHSYSILING 270
Query: 352 LVKKKKIKEAKGVIRTI-KKKFPPNVL 377
K ++I EAK ++ + +K+ PN +
Sbjct: 271 YCKSRRIDEAKALLTQMSEKELIPNTV 297
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 4/230 (1%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
S ++ + + KS+R + + L+ I L++ A A F
Sbjct: 260 SVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELF 319
Query: 121 DQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
+M G ++ +++ LL C L + + +L +K L PD + Y +L++
Sbjct: 320 KKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK--LEPDIVLYNILIQGMF 377
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G + A EL +++ G+ + TY ++ L K+G ++EA +L+ +ME G D
Sbjct: 378 IAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSC 437
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+YNV I DP +LIDEM D+ ++ L+ +E++
Sbjct: 438 SYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESHDEII 487
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 140/337 (41%), Gaps = 43/337 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG--TP 129
LAK F L++ + + LIR Y +AGM A F M+E G P
Sbjct: 144 LAKHHHFPLARHLLDEMRKRSIPISSQVILALIRRYVRAGMSSEASDLFRSMEEYGGGVP 203
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ +LL A ++ RL + LFD K +PD + Y L+ + C SG DKA +
Sbjct: 204 DPAV-LASLLGALSKKRLASEAQALFDSY--KSVFTPDVVLYTTLVHAWCRSGCLDKAEQ 260
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNT 248
+ EM+ G+ TYT V++ +Y+ G A+ L +M G + A +N + +
Sbjct: 261 VFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHV 320
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK------------------------ 284
G E++ ++ ++MR G PD I+YNFLM +C
Sbjct: 321 KAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPD 380
Query: 285 ----NEMM---------DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
N M+ D A K+YE ++E C PN T+ + + D ++ K
Sbjct: 381 CHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKK 440
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ P+ NT L+E + K A +R +
Sbjct: 441 DMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREM 477
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 147/298 (49%), Gaps = 13/298 (4%)
Query: 72 LAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
L+K + S+ + L +S+K+ P + L+ ++ ++G D A + F +M + G
Sbjct: 215 LSKKRLASEAQALFDSYKSVFTPDVV---LYTTLVHAWCRSGCLDKAEQVFAEMQQAGIM 271
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+V ++ A++ A R+ + L ++ P+ ++ ++++H +G S++ L+
Sbjct: 272 PNVYTYTAVIDAMYRAGQVPRAQELLCQM-IDSGCPPNTATFNAIMRAHVKAGRSEQVLQ 330
Query: 190 LLNEMENKGVEVTTVTYTTVL--NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-T 246
+ N+M G + +TY ++ +C Q N + A +L +M KG D +N +
Sbjct: 331 VHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDCHTFNPMLKL 390
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G+ + +L + M++ KP+ I+YN LM + K++ MD ++ + ++ G PN
Sbjct: 391 VVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKDMDAQGVEPN 450
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI----PDFNTVKLLVEGLVKKKKIKE 360
T+ I CG GN+ +AY +E + V + P ++ V +L+ + +K +E
Sbjct: 451 VNTYGALIETFCGRGNWKRAYATLREMLEVKSLKPKKPVYDMVLVLLRKAGQLRKHEE 508
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 142/353 (40%), Gaps = 58/353 (16%)
Query: 53 KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE-SHKNDPKITQEPYLCNLIRSYGQAG 111
KH+ S S L +RRL ++ F+ E + E + + P +T E L+ S QA
Sbjct: 8 KHHLSSAS------LFLRRLCTTEPFT--EPITEPAPASPPPLTHEE--TKLVDSL-QAA 56
Query: 112 MFDH----------AMRTFDQMDELGT---------PRSVISFNAL--LFACTRSRLYDK 150
+ DH A FD + L T P ++F+ L A R + +
Sbjct: 57 LLDHRRAHPATPLPASPPFDPLPSLSTTLTGLLPSTPSPHLTFHVFGRLLALRRGIPFPE 116
Query: 151 VPILF---------DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
F D +P+ Y D LL K H A LL+EM + + +
Sbjct: 117 ALAFFNHVLPSLPTDSLPELYASMMD-----LLAKHH----HFPLARHLLDEMRKRSIPI 167
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL----K 257
++ ++ + G + EA L+ ME+ G + A + +RL +
Sbjct: 168 SSQVILALIRRYVRAGMSSEASDLFRSMEEYGGGVPDPAVLASLLGALSK--KRLASEAQ 225
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L D + PD + Y L+ +C++ +D+A++V+ +++ G PN T+ I +
Sbjct: 226 ALFDSYKSV-FTPDVVLYTTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAM 284
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+G +A ++ + + P+ T ++ VK + ++ V +++
Sbjct: 285 YRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQ 337
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 4/322 (1%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
S + H S AQ L +R ++ S + L ++H P T P ++ +Y
Sbjct: 42 SFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFT-PCSTYTPLYDTVVNAYV 100
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+ D A+ M G +FN LL RS +DK +F+E+ K L D
Sbjct: 101 HSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVL--DA 158
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
S+G+++K C++G K LL +E G+ V YTT+++ K GN A+ L+ +
Sbjct: 159 YSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCK 218
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M + G+ + Y+V + + +R ++ + M+ +G+ P+ +YN L++ YC + M
Sbjct: 219 MNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGM 278
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D+A KV+ + E G + T+ I LC F +A K+ + V P+ T +
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338
Query: 348 LVEGLVKKKKIKEAKGVIRTIK 369
L+ G +K+ A + +K
Sbjct: 339 LINGFCDVRKMDSAVRLFNQLK 360
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y GM D A + F +M E G V+++N L+ R + + + L ++ K
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV-NKV 327
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP+ ++Y +L+ CD D A+ L N++++ G+ T VTY T++ K N A
Sbjct: 328 GLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGA 387
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EME++ + Y + I + + E+ E+ M +GL PD +Y+ L+
Sbjct: 388 LDLVKEMEERCIAPSKVTYTILI-DAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLH 446
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + M EA K+++ L E PN+ + T I+ C G+ +A ++ E V +P
Sbjct: 447 GLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVP 506
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
+ + + L + +K KEA+ ++ + I P+V
Sbjct: 507 NVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSV 543
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 157/373 (42%), Gaps = 45/373 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-L 100
D+AL + P+S+ + L + L +S F + K+ K+ + Y
Sbjct: 106 DQALTFLHHMIHEGHVPLSNTFNNLLCL--LIRSNYFDKAWWIFNELKS--KVVLDAYSF 161
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-------RLYDK--- 150
+I+ +AG F R ++E G +V+ + L+ C + L+ K
Sbjct: 162 GIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNR 221
Query: 151 ---VP------ILFD---------------EIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
VP +L + E K+ + P+ +Y L+ +C+ G DK
Sbjct: 222 LGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDK 281
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A ++ EM KG+ +TY ++ L + EA +L ++ K G+ ++ YN+ I
Sbjct: 282 AFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN 341
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
D ++ L ++++ +GL P ++YN L+ Y K E + A + + +EE
Sbjct: 342 GF--CDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+P+ T+ I + +KA ++ +PD T +L+ GL +KEA
Sbjct: 400 APSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASK 459
Query: 364 VIRTI-KKKFPPN 375
+ +++ + PN
Sbjct: 460 LFKSLGEMHLQPN 472
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + + A M++ G V +++ LL + LF + + +
Sbjct: 409 LIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH 468
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ + Y ++ +C GSS +AL LLNEM G+ ++ + + L + +EA
Sbjct: 469 -LQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEA 527
Query: 223 ERLWSEMEKKGVDLDVAAY 241
E L +M G+ V+ Y
Sbjct: 528 ELLLGQMINSGLKPSVSLY 546
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 142/275 (51%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G + A D+M G +V ++N L+ A D+ + E+ +K
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK- 360
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD ++Y +L+ +C G+ KA L +EM +KG++ T VTYT+++ L K+G ++A
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++ +KG+ D+ +N I + G+ +R ++ EM + PD +++N LM
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG 480
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ ++ A+++ E ++ G P+ ++ T I G+ A++V E + + P
Sbjct: 481 RCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPT 540
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
T L++GL K ++ A+ +++ I K PN
Sbjct: 541 LLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPN 575
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 132/272 (48%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I Y G + A FD M G ++ + + C +L + +L E K+
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGML--EKMKE 289
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P ++Y L+ +C+ G+ + A + ++M +G+ T TY +++ L+ +E
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A+ + EM +KG+ D YN+ I N Y G+ ++ L DEM G++P ++Y L+
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILI-NGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLI 408
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K M +A ++E + G P+ F I C +GN D+A+ + KE + +
Sbjct: 409 YVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVV 468
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L++G ++ K++ A+ +I +K +
Sbjct: 469 PDEVTFNTLMQGRCREGKVEAARELIEEMKSR 500
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 16/259 (6%)
Query: 124 DELGTPRSVIS------FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ELG R V+ ++ L+ AC + D FD + K + P + +L
Sbjct: 107 NELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGK-GVIPHVHACNDMLSL 165
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
S ++KA L EM ++ + VT+ ++N L K+G ++A+ ME G+ +
Sbjct: 166 FLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPN 225
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
V YN I G E + + D M+ G+KPD+ +Y ++ CK ++EA + E
Sbjct: 226 VVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLE 285
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAY----KVFKESVMVHKIPDFNTVKLLVEGL 352
++E G P A T+ T I C GN + A+ K+ +E +M P +T +L+ L
Sbjct: 286 KMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLM----PTVSTYNMLIHAL 341
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K+ EA G+I+ + +K
Sbjct: 342 FLDCKMDEADGIIKEMSEK 360
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR+ + D A FD M G V + N +L +S +K +L+ E+ +
Sbjct: 127 LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM-FRM 185
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +++ +++ C G KA E + ME G++ VTY T+++ +G E A
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA 245
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ M+ +GV D Y I+ G E ++++M++ GL+P ++YN L+
Sbjct: 246 RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDG 305
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC ++ A + + G P +T+ I+ L D+A + KE +PD
Sbjct: 306 YCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPD 365
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L+ G + +K+A
Sbjct: 366 SVTYNILINGYCRCGNVKKA 385
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 164/371 (44%), Gaps = 19/371 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ +++ SP S Y + + LAK+ + +D L + +
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYG--ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI A FD A F M+ G P S +++N ++ A C R L + ++ I
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ---- 216
+ PD ++Y ++ C S ++AL L NEME G ++ T++ L +Q
Sbjct: 423 GH--VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480
Query: 217 -----GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
G +EA RL M G DV Y+ I+ + + L+++M KP
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
++ N L+ CK + EA++V + + +G SP+ T+ T ++ C +G ++A ++
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELGL 389
+ V P+ T LV GL K ++ EA GV +K PN+ + LG
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI---LGF 657
Query: 390 VPAPAVGDGQK 400
A V G K
Sbjct: 658 CSAGQVDGGLK 668
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 172/409 (42%), Gaps = 40/409 (9%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYA--SPVSSRYAQDLTVRRLAKSK 76
S T S+++ + L D A ++++ +++ SPV+ D + +R +
Sbjct: 352 SGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEE 411
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
I+ +IE +T + L +S + A+ F++M+ LG + S N
Sbjct: 412 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKS----SRVEEALLLFNEMERLGCTPNRRSHN 467
Query: 137 ALLF----------ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
++ AC R +L D+ L + ++ PD ++Y L+ C D
Sbjct: 468 TIILGLCQQSKIDQACQRGKL-DEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDD 525
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI- 245
A LL +M + + T VT T+++ L K G +EA + M G DV YN +
Sbjct: 526 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ G ER +EL+ +M GL P+ ++Y L++ CK + EA V+ ++ +GC+P
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ I C +G D K+F E V PD L L K + A ++
Sbjct: 646 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705
Query: 366 RTIKK------------KFPPNVLRAWKKVEEELGLV---------PAP 393
R ++ +F + L K+E LG V PAP
Sbjct: 706 REGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAP 754
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 153/311 (49%), Gaps = 18/311 (5%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD------ELGTPRSVISFNA 137
L+ + ++ E C ++ +AG + A+R F + +P S+ +N
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNI 293
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
++ ++ D+ +F+++ ++ N+SPD SYG+L+ +G + A L ++ +
Sbjct: 294 VILGLCQNDRIDEAVQMFEKMNER-NVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS 352
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERL 256
GV +TV YT++++ L + ++A L+++M ++G YNV I + G E
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+LI +M + G PD ++YN +M CK+ ++EA ++ +E GC+PN + T I
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472
Query: 317 LCGS---------GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR- 366
LC G D+A+++ K +PD T L+ GL ++ +A+ ++
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 532
Query: 367 TIKKKFPPNVL 377
+K++ P V+
Sbjct: 533 MVKRQCKPTVV 543
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 142/312 (45%), Gaps = 13/312 (4%)
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
PV++ A ++ V L K+ R D L + L +++ +G D A+
Sbjct: 141 PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEAL 200
Query: 118 RTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
+ + + +++ N LL C+R ++ DK L +P + +PD++SY +L
Sbjct: 201 QVYRENRR---EPCLVTLNVLLEGFCSRGQV-DKARELLRAMPDE-ECAPDEVSYCTVLD 255
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVT------YTTVLNCLYKQGNAEEAERLWSEME 230
C +G ++A+ L + E ++ + Y V+ L + +EA +++ +M
Sbjct: 256 GLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMN 315
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
++ V D +Y + I G + L ++ +G+ P T++Y L+ C D
Sbjct: 316 ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 375
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A++++ + GC P+ T+ I C G ++A + K+ + +PD T ++
Sbjct: 376 DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 435
Query: 350 EGLVKKKKIKEA 361
+GL K +++EA
Sbjct: 436 DGLCKSSRVEEA 447
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 109/266 (40%), Gaps = 32/266 (12%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+A D A+ M E P + S +++L S D+ ++ E ++ P
Sbjct: 157 KAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE----PCL 212
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++ +LL+ C G DKA ELL M ++ V+Y TVL+ L K G EEA RL+
Sbjct: 213 VTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLF-- 270
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
GD E L+ YN ++ C+N+ +
Sbjct: 271 ----------------------GDRELPSSSSSSSSPPSLR----GYNIVILGLCQNDRI 304
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
DEA +++E + E SP++ ++ I L +G + A +F++ + P L
Sbjct: 305 DEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364
Query: 349 VEGLVKKKKIKEAKGVIRTIKKKFPP 374
+ GL +A+ + + ++ P
Sbjct: 365 IHGLCMANSFDDARELFADMNRRGCP 390
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 109/228 (47%), Gaps = 11/228 (4%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C R ++ V I F + + ++ PD Y +L+ S ++ +++ M ++G
Sbjct: 21 CNVGRTFEAVKI-FSLMEECHSPYPD--VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFP 77
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
+ T+TT+L L K G +EAE + EM + + A + G ER +L+
Sbjct: 78 DSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLL 137
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+ M A ++ +YN ++ CK +D+A ++ + E A + + + L S
Sbjct: 138 EIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDS 193
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
G D+A +V++E+ + P T+ +L+EG + ++ +A+ ++R +
Sbjct: 194 GRIDEALQVYREN---RREPCLVTLNVLLEGFCSRGQVDKARELLRAM 238
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 8/183 (4%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITN-TYGG 251
M +G+ + +T+V+ G EA +++S ME+ DV YNV I + +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQ 58
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ E +K+++ M D G PD+ ++ ++ CK MDEA+ V + + P T
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ LC G+ ++A+++ + + + + + ++V L K ++ +A + RT+ +K
Sbjct: 119 FLAHELCLRGSMERAFQLLE----IMPVANSSAYNIVVVALCKAARVDDALELARTMSEK 174
Query: 372 FPP 374
P
Sbjct: 175 RIP 177
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 149/303 (49%), Gaps = 13/303 (4%)
Query: 81 IETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
++ +E +N P EP + +++ A ++ A + ++M G P +V++FN
Sbjct: 32 VDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 91
Query: 138 LL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ F C R + + +L ++IPK Y +P+ +SY LL + C DKA+ + M +
Sbjct: 92 LISFLCRRGLVEPAMEVL-EQIPK-YGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVS 149
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPER 255
+G V+Y T+L L + G + A L +++ KG + +YN I T G +
Sbjct: 150 RGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKE 209
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
EL+DEM GL+PD I+Y + + C+ + ++EA + + +++ G P + +
Sbjct: 210 ALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILL 269
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI------RTIK 369
LC A +F + +P+ +T +LVEGL + +KEA+ ++ +
Sbjct: 270 GLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVN 329
Query: 370 KKF 372
KKF
Sbjct: 330 KKF 332
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 3/226 (1%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L DE+ K +PD I+Y ++L C G D A+E L + + G E TV+Y VL L
Sbjct: 3 LLDEMRDK-GCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
+ E+AE+L EM KG +V +N+ I+ G E E+++++ G P++
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+SYN L+ +CK + MD+A E + GC P+ ++ T + LC +G D A + +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
P + +++GL K K KEA ++ I K P+++
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDII 227
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++LL+EM +KG +TY VLN + ++G ++A + G + + +YN+ +
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 248 TYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + E ++L++EM G P+ +++N L++ C+ +++ A +V E + + GC+PN
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ ++ ++ C DKA + V PD + L+ L + ++ A ++
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180
Query: 367 TIKKKFPPNVLRAWKKVEEEL 387
+K K VL ++ V + L
Sbjct: 181 QLKGKGCSPVLISYNTVIDGL 201
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 21/352 (5%)
Query: 41 PDKALDIYSSV----SKHYASPVSSRYAQDLTVRRLAK-SKRFSDIETLIESHKNDPKIT 95
PD+A ++ + K V+S A L R+L K ++ F DI
Sbjct: 34 PDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISNY----------- 82
Query: 96 QEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
P C LI + G D FD+M + G +V++F L++ + + +
Sbjct: 83 GSPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEAL 142
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L +++ K Y + P+ Y L+K C G + A +L EM V++ + Y+T+++
Sbjct: 143 RLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISA 202
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPD 271
L+K G EE + EM + G D YN I + D E ++DEM + G KPD
Sbjct: 203 LFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPD 262
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
S+N ++ CK +D+A + E + GC P+ ++R LC +A +
Sbjct: 263 VFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILD 322
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
E + +P ++ LV+ L ++ ++ ++ ++ + N + W +V
Sbjct: 323 EMIFKGYVPRNESINKLVDRLCQECNMELLWMILNSLGRGNRMN-MDMWARV 373
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 6/301 (1%)
Query: 81 IETLIESHKNDPKIT-QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
+E +++ K + + E CN+I YG+A + D A + F+++ R+V S N+LL
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLL 60
Query: 140 FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
A ++R +K+ +F +I Y SPD ++ +L+ + C G D + +EM+ +GV
Sbjct: 61 AALLKNRQLEKMTQVFVDI-SNYG-SPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGV 118
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK-KGVDLDVAAYNVRITNTYG-GDPERLK 257
+ VT+ T++ L +EA RL +M K + + + Y I G G+
Sbjct: 119 KPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAF 178
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+L +EM + +K + Y+ L++ K+ +E + + ENGC P+ T+ I
Sbjct: 179 KLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGH 238
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
C + + A++V E V PD + ++ L K+ K+ +A ++ + ++ PP+V
Sbjct: 239 CKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDV 298
Query: 377 L 377
L
Sbjct: 299 L 299
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 143/348 (41%), Gaps = 34/348 (9%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
D+ V RL R D L+ LI +Y + G+ + A + M
Sbjct: 393 GMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIM 452
Query: 124 DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLS----------------- 165
++LG S +FN L+ C + RL + +L + K Y LS
Sbjct: 453 NKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAV 512
Query: 166 ---------------PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
PD I++ + C ++A + EM +G+ TY +++
Sbjct: 513 CALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSII 572
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
+ L + GN EA +L M + G+ D+ N+ I G E + L+ +M GL
Sbjct: 573 SALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLT 632
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PDT++YN ++ YC+ + M+ A + GC P+ T+ W++ LC + ++A KV
Sbjct: 633 PDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKV 692
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
E V + PD T L++G+ + R IK F PN +
Sbjct: 693 LDELVAMGCPPDSVTYNTLMDGICSDVLDRAMILTGRLIKMAFQPNTI 740
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 131/298 (43%), Gaps = 38/298 (12%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPD 167
++G A F++M G S+ +FNA++ C R + +L I ++ + P+
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLL--GIMGEFGIVPN 253
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
SY +L+K HC G S A +L EM G E T VTY +++ L +G EA RL+
Sbjct: 254 VCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFD 313
Query: 228 EMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF-------- 277
EM + G+ + +NV I + Y G ++ EM+ GL PD+ ++N
Sbjct: 314 EMAQVGIQANTITFNVLI-DGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKF 372
Query: 278 -----------------------LMTC-YCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
++ C C + +D+A ++ G E G + T F
Sbjct: 373 GHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNAL 432
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I G ++A+++++ + P +T L+ GL + ++ EA+ ++ + K
Sbjct: 433 IAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 490
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 137/329 (41%), Gaps = 42/329 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A ++Y ++K +P SS + + + L R + + L+E + +
Sbjct: 443 EEAFELYRIMNKLGLAPSSSTF--NYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTI 500
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L S+ + G A++ +D M +LG I+F+A + R ++ F E+ +
Sbjct: 501 CLDASF-REGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTAR 559
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +Y ++ + C +G+ +AL+L M G+ T +++ L ++G E
Sbjct: 560 -GIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEM 618
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ L +M G+ D YN I N Y D +++M AG +PD +YN M
Sbjct: 619 VDNLLLDMCSNGLTPDTVTYNT-IINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWM 677
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT--------------------------- 312
C N M+++A KV + L GC P++ T+ T
Sbjct: 678 HSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRAMILTGRLIKMAFQP 737
Query: 313 -------WIYHLCGSGNFDKAYKVFKESV 334
++ H C G F K ++ E +
Sbjct: 738 NTITLNVFLSHFCKQG-FGKRALMWAEKL 765
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L L + +G + +AL++L + G + +L L++ G A ++ EM +
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G +A +N I + G L+ M + G+ P+ SYN L+ +C +A
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDA 273
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K++E + +GC P T+ + LC G +A ++F E V + T +L++G
Sbjct: 274 FKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDG 333
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
K ++ +A R +K +
Sbjct: 334 YAKTGRMDQACAAYREMKAR 353
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 136/345 (39%), Gaps = 73/345 (21%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPI 153
P +C+ LI+ + G A + F++M G +V+++N L+ C R+ +
Sbjct: 252 PNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRM-PEARR 310
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LFDE+ + + + I++ +L+ + +G D+A EM+ +G+ + T+ +
Sbjct: 311 LFDEM-AQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGA 369
Query: 214 YKQGNA----EEAERLWSEMEKKGVDLDVA--AYNVRITNTY--------GGDP------ 253
YK G+A + + S M G+D+ V ++ R+ + + G P
Sbjct: 370 YKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGF 429
Query: 254 -------------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK-------- 292
E EL M GL P + ++N+L+ C +DEA+
Sbjct: 430 NALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVS 489
Query: 293 --------------------------KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
K ++ + + G P+ F +I LC ++A
Sbjct: 490 KGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEA 549
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
Y+ F E +P+ T ++ L + + EA + + +++
Sbjct: 550 YQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQN 594
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 83/200 (41%), Gaps = 1/200 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + +AG A++ M + G + + N L+ R + V L ++
Sbjct: 570 SIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSN 629
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+PD ++Y ++ ++C + + A+ +N+M G E TY ++ L +
Sbjct: 630 -GLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQ 688
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A ++ E+ G D YN + +R L + +P+TI+ N ++
Sbjct: 689 AGKVLDELVAMGCPPDSVTYNTLMDGICSDVLDRAMILTGRLIKMAFQPNTITLNVFLSH 748
Query: 282 YCKNEMMDEAKKVYEGLEEN 301
+CK A E L E+
Sbjct: 749 FCKQGFGKRALMWAEKLRED 768
>gi|194707518|gb|ACF87843.1| unknown [Zea mays]
gi|219888485|gb|ACL54617.1| unknown [Zea mays]
Length = 196
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
M KG++ ++T+TT L YK+ ++ +++ M+K G + YNVR+ + G
Sbjct: 1 MCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCKLGR 60
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ L+DEM G KP+ ++YN L+ +CK ++EAK++Y+ + G ++ +
Sbjct: 61 SGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYFM 120
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
IY+LC + D A ++ E + +P F+T+K+LV GL +I EAKG+I +K+KF
Sbjct: 121 LIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEKMKEKF 180
Query: 373 PPNVLRAWKKVEE 385
P WK+VEE
Sbjct: 181 PDKT-EGWKEVEE 192
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 1/162 (0%)
Query: 74 KSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVI 133
K ++F DI+ ++E K + P ++S + G A D+M + GT + +
Sbjct: 22 KEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMMKKGTKPNWV 81
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++N L++ + ++ L+ E+ +K L D Y +L+ C D AL L NE
Sbjct: 82 TYNHLIYGFCKEGDLEEAKRLYKEMGRK-GLVGDSDFYFMLIYYLCKGDDLDTALGLYNE 140
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ K T ++N L +EA+ + +M++K D
Sbjct: 141 IAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEKMKEKFPD 182
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 139/271 (51%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +A + A+ QM E+G V F L+ A R L DE+ K
Sbjct: 51 LIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV-KGS 109
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD + Y + + +G+ D A + +E++ +G++ V+YT+++ L K G EA
Sbjct: 110 CLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEA 169
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E L+++ME + AYN I YG G E +L++ +R+ G P +S+N ++T
Sbjct: 170 EELFAQMEAERSVPCAYAYNTMIMG-YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 228
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C K +DEA ++E ++++ PN++T+ I LC G ++AY++ E P
Sbjct: 229 CLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 287
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ TV ++V+ L K +K++EA + + ++
Sbjct: 288 NLLTVNIMVDRLCKARKLEEAYKIFESASQR 318
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 149/314 (47%), Gaps = 5/314 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R + E L + + + +I YG AG F+ A + +++ E G S
Sbjct: 160 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 219
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+SFN++L + R D+ LF E+ KK + P+ +Y +++ C G ++A +L
Sbjct: 220 VVSFNSILTCLGKKRKVDEALSLF-EVMKK-DAEPNSSTYNIIIDMLCLGGRVEEAYRIL 277
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+EME+ + +T +++ L K EEA +++ ++G + D Y + + G
Sbjct: 278 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY-CSLIDGLGK 336
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + L ++M DAG + + Y L+ + + ++ KV++ L GC P+ T
Sbjct: 337 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTL 396
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T++ + +G +K +F++ +PD + +L+ GL K + +E + +K
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456
Query: 370 KKFPPNVLRAWKKV 383
++ RA+ V
Sbjct: 457 QQGFALDARAYNAV 470
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMD 124
VR LA+ + +D L++ K +P I L N+ I +G+AG D A + F ++
Sbjct: 87 VRALAREGQVADALALVDEVKGSCLEPDIV----LYNVCIDCFGKAGNVDMACKFFHELK 142
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +S+ ++++ ++ + LF ++ + ++ P +Y ++ + +G
Sbjct: 143 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRF 201
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+ A +LL + +G + V++ ++L CL K+ +EA L+ E+ KK + + + YN+
Sbjct: 202 EDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNII 260
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I GG E ++DEM A L P+ ++ N ++ CK ++EA K++E + GC
Sbjct: 261 IDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGC 320
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+P+ T+ + I L G D+AY++F++
Sbjct: 321 NPDCVTYCSLIDGLGKKGQVDEAYRLFEK 349
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 6/264 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG + F+ + G V S++ L+ T++ + +F + K+ + D
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM-KQQGFALDA 464
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y ++ C SG KA E+L EM+ K V+ T TY +++ L K +EA L+ E
Sbjct: 465 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 524
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ KG++L+V Y+ I G R+ E +++EM GL P+ ++N L+ K
Sbjct: 525 AKSKGIELNVVLYSSLIDGF--GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 582
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
E ++EA ++ ++E C PN T+ I LC ++KA+ +++ +P+ T
Sbjct: 583 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 642
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIK 369
++ GL K I +A + K
Sbjct: 643 TTMISGLAKVGNITDAYSLFERFK 666
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 119/237 (50%), Gaps = 4/237 (1%)
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
A R+R D +L + ++ P +Y +L+ + ++ ++ALELL +M+ G E
Sbjct: 19 ALVRARRLDD-AVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYE 77
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKE 258
V +TT++ L ++G +A L E++ ++ D+ YNV I + +G G+ + +
Sbjct: 78 VGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCI-DCFGKAGNVDMACK 136
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
E++ GLKPD +SY ++ CK + EA++++ +E P A + T I
Sbjct: 137 FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 196
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
+G F+ AYK+ + IP + ++ L KK+K+ EA + +KK PN
Sbjct: 197 SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 253
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 148/327 (45%), Gaps = 9/327 (2%)
Query: 54 HYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMF 113
+AS + ++ V RL K+++ + + ES C+LI G+ G
Sbjct: 281 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 340
Query: 114 DHAMRTFDQMDELGTPRSVISFNALL---FACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
D A R F++M + G + + + +L+ F R KV F E+ ++ PD
Sbjct: 341 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKV---FKELIRR-GCKPDLTL 396
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ +G +K + ++ + G +Y+ +++ L K G A E ++ M+
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
++G LD AYN + G + E+++EM++ ++P +Y ++ K + +D
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA ++E + G N + + I G D+AY + +E + P+ T L+
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
Query: 350 EGLVKKKKIKEAKGVIRTIKK-KFPPN 375
+ LVK ++I EA +++K+ K PPN
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPN 603
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 40/268 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG F M + G ++NA++ +S K + +E+ +K
Sbjct: 435 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK- 493
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +YG ++ D+A L E ++KG+E+ V Y+++++ K G +EA
Sbjct: 494 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 553
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--------ERLKEL--------------- 259
+ EM KKG+ +V +N + + + +KE+
Sbjct: 554 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 613
Query: 260 -------------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+M+ GL P+ ++Y +++ K + +A ++E + NG P+
Sbjct: 614 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 673
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESV 334
A +F I G N ++A + ++ +V
Sbjct: 674 AASFNALIE---GMSNANRAMEAYQTTV 698
>gi|297610360|ref|NP_001064440.2| Os10g0363500 [Oryza sativa Japonica Group]
gi|110288965|gb|AAP53322.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679339|dbj|BAF26354.2| Os10g0363500 [Oryza sativa Japonica Group]
Length = 512
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 93 KITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+I+ Y N++ R++ G A D+M E G R+ +SFN L+ A R + D
Sbjct: 210 RISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGV-DAG 268
Query: 152 PILFDEIP-KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
P L ++ ++ L PD ++Y ++ C G KA ++L+EM KGV TVTY T++
Sbjct: 269 PALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLI 328
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
+ G+ A R+ EM K V+LD+ YN I G ++++ L+ E+ A L+
Sbjct: 329 HGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLE 388
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +++ L+ +CK + + A ++ ++++G PN TT++ I C + + + A V
Sbjct: 389 PNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDV 448
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK--KFPPNV 376
+ + PD + +GL K KK+ A+ +R++ KF P+V
Sbjct: 449 MGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAEN-LRSLNNGLKFIPDV 496
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F M G V+S N + A R + F E+ ++ +SP+ + ++L
Sbjct: 164 ATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVL 222
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-NAEEAERLWSEMEKKGV 234
++ CD G + A E+L++M GV TTV++ T++ + G +A A +L +ME++G+
Sbjct: 223 RAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGL 282
Query: 235 DLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV Y+ I G + +++ EMR G+ P+T++YN L+ Y A +
Sbjct: 283 VPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGR 342
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
V+E + +N + T+ I LC G K + +E P+ +T L+ G
Sbjct: 343 VHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWC 402
Query: 354 KKKKIKEAKGVIRTIKKK-FPPN 375
K + + A ++ +KK F PN
Sbjct: 403 KMQNSERALQLLNVMKKSGFHPN 425
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 175/347 (50%), Gaps = 18/347 (5%)
Query: 42 DKALDIYSSV------SKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKIT 95
D AL+++ + +K + +P + Y + + L K R + L+ ++D
Sbjct: 204 DDALEVFEKMKGEKEETKVFVAPDTIMY--NTLIDGLCKVGRQEEALCLMGKMRSDQCAP 261
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPIL 154
LI Y ++G + A + F++M+ +VI+ N L+ C +R+ V
Sbjct: 262 TTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVE-- 319
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F + ++ L + ++Y + + + C+ + +KA+E L+EM G V Y T++ L
Sbjct: 320 FFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLA 379
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTI 273
+ G ++A + S++++ G LD YNV I+ + +R +E ++EM AG+KPD++
Sbjct: 380 QAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSV 439
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L++ + K A K + + EE G SP T+ I+ C + N D+A K+FKE
Sbjct: 440 TYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKE 499
Query: 333 -SVMVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIK-KKFPPN 375
+ + K+P NTV +L++ L K+ ++ A ++ +K + PN
Sbjct: 500 MNNVASKVPP-NTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPN 545
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 10/279 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L LI ++G + A D + L + NALL ++R + K+ +L ++
Sbjct: 120 LTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKM- 178
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT------TVTYTTVLNCL 213
K N+ P I++G+L+ C D ALE+ +M+ + E T+ Y T+++ L
Sbjct: 179 KDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGL 238
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPD 271
K G EEA L +M A +N I N Y G+ E +L +EM +A ++P+
Sbjct: 239 CKVGRQEEALCLMGKMRSDQCAPTTATFNCLI-NGYCRSGEIEVAHKLFNEMENAQIEPN 297
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
I+ N L+ CK+ + A + + +++ G N T+ +I C N +KA +
Sbjct: 298 VITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLD 357
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
E PD L+ GL + ++ +A V+ +K+
Sbjct: 358 EMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKE 396
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 7/265 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
I ++ + AM D+M + G P +V+ + + RL D ++ K+
Sbjct: 339 FINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVV--SKLKE 396
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
D++ Y +L+ C D+A E LNEME GV+ +VTY T+++ K GN +
Sbjct: 397 AGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKL 456
Query: 222 AERLWSEM-EKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLK--PDTISYNF 277
A + +M E++G+ V Y I + + ++ EM + K P+T+ YN
Sbjct: 457 AHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNI 516
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK ++ A + + ++ G PN TT+ + L DKA+K+ V
Sbjct: 517 LIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQA 576
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAK 362
PD+ T+++L E L +I + K
Sbjct: 577 CNPDYITMEILTEWLSAVGEITKLK 601
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 31/307 (10%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV---------ISF 135
++SH + + E +I ++G D+AM +DE+ P S I F
Sbjct: 32 LDSHAKNTNVRNE-----IINLLLKSGRVDNAMNV---LDEMLLPESEFRPNDKTAGIVF 83
Query: 136 NALL-FACTRSRLY-DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL-N 192
N LL R+ D++ L + K +N+ PD I+ L+ C SG+++ A +L N
Sbjct: 84 NNLLKIDGLEGRVKEDEIAGLVSKFGK-HNIFPDTIALTQLISKLCRSGNTNLAWNILDN 142
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT--YG 250
M G++ +L L K + L +M+ + V + + I + +
Sbjct: 143 LMMLNGLK-DAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFR 201
Query: 251 GDPERLKELIDEMRD------AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ L E+ ++M+ + PDTI YN L+ CK +EA + + + C+
Sbjct: 202 RIDDAL-EVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCA 260
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P TF I C SG + A+K+F E P+ T+ LV+G+ K +I A
Sbjct: 261 PTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEF 320
Query: 365 IRTIKKK 371
R +++K
Sbjct: 321 FRVMQQK 327
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y A F++M + G V+++N L+ ++++ D+ +LF E+ K
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK- 364
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL P SY L+ C+SG +LL+EM VTY +++ L K+G EA
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M KKGV ++ YN + + K++ + M +GL+PD ++YN L+
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK EM+DEA +++ + P+ ++ + I LC G ++ E + PD
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPD 544
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
T +L++ K + +A + R I + P+
Sbjct: 545 VITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +G H + D+M P V+++N L+ A C R+ + + +L + K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV--MMMK 433
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y ++ +C + + A ++ N M G+E + Y ++N K +E
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM K + D+A+YN I G ++EL+DEM D+G PD I+YN L+
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 281 CYCKNEMMDEA----KKVYEG------------------------------LEENGCSPN 306
+CK + D+A +++ EG L +GCSPN
Sbjct: 554 AFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN 613
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
T+ I LC G+F +A + + + PD T ++++ L+++ + +A+
Sbjct: 614 VQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+ +M++ +++ ++AL+ + L +I ++
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER- 224
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D ++Y L+ C G + +LL +M + V+ T+ +++ L K+G EA
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + + M K+G D+ YN + + +EL + M GL+PD ++YN L+
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +M+DEA +++ L P ++ + I LC SG K+ E + PD
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
T +L++ L K+ +I EA GV + +KK PN++
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIV 441
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 8/333 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDL-TVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
D A+ ++ + + + P +S + + L + R+ + T ++S P I
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT---F 93
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
LI Y A + + G ++++FN ++ C ++ + + +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ Y D+ +YG L+ +G AL LL EME V+ V Y+ +++ L K G
Sbjct: 154 QGYLF--DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
+A L S++ ++G+ LD YN I G + + +L+ +M + PD ++N L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + EA+ V + + G P+ T+ + C N +A ++F V
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD +L++G K K + EA + + + K
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 134/331 (40%), Gaps = 9/331 (2%)
Query: 55 YASP---VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---YLCNLIRSYG 108
YA P +SSR+ + K+ RF +++ + ++ P L+ +
Sbjct: 7 YAIPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIV 66
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+ G + A+ F Q+ G S+ +F +L C + + K P+
Sbjct: 67 RMGHYPTAISLFTQLQSKGISPSIATF-TILINCYFHQSHTAFAFSLLATILKSGYQPNL 125
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ ++ C +G KAL+ + +G TY T++N L K G + A L E
Sbjct: 126 VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185
Query: 229 MEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
MEK V ++ Y+ I G L ++ + G+ D ++YN L+ C
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
E ++ + P+ TF I LC G +A V + PD T
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 348 LVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
L+EG ++ + EA+ + R +K+ P+VL
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVL 336
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F++M + G ++++N L+ ++ + D+ +LF E+ K NL PD SY L+ C
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLC 521
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+ G ELL+EM + G +TY +L+ K ++A L+ ++ +G+ D
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFY 580
Query: 240 AYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+ + N G+ ++ E + + G P+ +Y L+ CK+ EA + +
Sbjct: 581 TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKM 640
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
E+N P+A TF I L DKA K+ +E +
Sbjct: 641 EDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
EP + N LI Y + M D A+ F +M + S+N+L+ C R+ V
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI-PHVQ 530
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L DE+ SPD I+Y +LL + C + DKA+ L ++ +G+ T +++
Sbjct: 531 ELLDEMCDS-GQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDN 588
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
L K + AE + G +V Y + I G L+ +M D PD
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I++ ++ + D+A+K+ E + G
Sbjct: 649 AITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 40/168 (23%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI- 158
LCNL G H D+M + G VI++N LL A +++ +DK LF +I
Sbjct: 520 LCNL-------GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 159 ----PKKY-------NL---------------------SPDKISYGLLLKSHCDSGSSDK 186
P Y NL SP+ +Y +L+ + C GS +
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
A+ LL++ME+ +T+ ++ L ++ ++AE+L EM +G+
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 171/397 (43%), Gaps = 66/397 (16%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+AL +++ + +H SP Y + + K+ + ++ + E
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTS--LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + Q G + A R +M + G SV+++NAL+ C ++ D + +L D K+
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLED--MKE 443
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+PD +SY +L C S D+AL + +M KG++ T+TY++++ +Q +E
Sbjct: 444 KGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A L+ EM + G+ D Y I N Y GD ++ +L +EM + G+ PD ++Y+ L+
Sbjct: 504 ACDLFDEMLRVGLPPDEFTYTALI-NAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562
Query: 280 T------------------------------------C--------------YCKNEMMD 289
C +C MM
Sbjct: 563 NGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +V+E + E P+ T + I+ C G+ KAY ++KE V + TV LV
Sbjct: 623 EADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALV 682
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEE 386
+ L K+ K+ E VI NVLR+ + E E
Sbjct: 683 KTLHKEGKVNELNSVI--------ANVLRSCELSEAE 711
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 155/341 (45%), Gaps = 10/341 (2%)
Query: 42 DKALDIYSSVSKHYASP--VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DKAL I H P +S D T+R SKR + +++ +
Sbjct: 151 DKALSIVHLSQAHGFMPGVLSYNAVLDATIR----SKRNISFAENVFKEMLQSQVSPNVF 206
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N LIR + AG D A+R FD+M++ G +V+++N L+ + R D L +
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K L P+ ISY +++ C G + +L EM +G + VTY T++ K+GN
Sbjct: 267 ALK-GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGN 325
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
+A + +EM + G+ V Y I + G+ R E +D+MR GL P+ +Y
Sbjct: 326 FHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTT 385
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + + M+EA +V + + +NG SP+ T+ I C +G A V ++
Sbjct: 386 LVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKG 445
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD + ++ G + + EA V R + K P+ +
Sbjct: 446 LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 151/344 (43%), Gaps = 11/344 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVR---RLAKSKRFSDIETLIESHKNDPKI-T 95
D D +L ++ S+ + Y S+ DL V+ RL + I L ++H P + +
Sbjct: 113 DEDASL-VFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLS 171
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
L IRS A F +M + +V ++N L+ + D F
Sbjct: 172 YNAVLDATIRSKRNISF---AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFF 228
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D + KK L P+ ++Y L+ +C D ELL M KG+E ++Y V+N L +
Sbjct: 229 DRMEKKGCL-PNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCR 287
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
+G +E + +EM K+G LD YN I G+ + + EM GL P I+
Sbjct: 288 EGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVIT 347
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L+ CK M+ A + + + G PN T+ T + G ++AY+V KE +
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI 407
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P T L+ G K+ +A V+ +K+K P+V+
Sbjct: 408 DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 149/305 (48%), Gaps = 10/305 (3%)
Query: 66 DLTVRRLAKSKRFSDIE-TLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
++ + L + R +I L E +K + + Y LI+ Y + G F A+ +M
Sbjct: 279 NVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTY-NTLIKGYCKEGNFHQALVMHAEML 337
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G SVI++ +L+ + ++ ++ D++ + L P++ +Y L+ G
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYM 396
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
++A +L EM + G + VTY ++N G +A + +M++KG+ DV +Y+
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 245 ITN---TYGGDPE-RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
++ +Y D R+K +M G+KPDTI+Y+ L+ +C+ EA +++ +
Sbjct: 457 LSGFCRSYDVDEALRVKR---KMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G P+ T+ I C G+ KA ++ E V +PD T +L+ GL K+ + +E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTRE 573
Query: 361 AKGVI 365
AK ++
Sbjct: 574 AKRLL 578
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y + A+ DQM G + ++FN L+
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + K PD ++YG+++ C G +D A LLN+ME +E + Y T+
Sbjct: 204 EAMALIDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYG--GDPERLKELIDEMRD 265
++ L K + ++A L+ EME KG+ +V Y+ I+ YG D R L+ +M +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR---LLSDMIE 319
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
+ PD +++ L+ + K + EA+K+Y+ + + P+ T+ + I C D+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
A ++F+ V H PD T L++G K K+++E V R + ++
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + +QM LG P + +++ L+ C RS+L + +L +
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ ++ LL +C S +A+ L+++M G + TVT+ T+++ L+ A E
Sbjct: 147 Y--EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M KG D+ Y V + GD + L+++M L+P + YN ++
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + MD+A +++ +E G PN T+ + I LC G + A ++ + + P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
D T L++ VK+ K+ EA+ + +K+ P+++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 6/287 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A ++M++ V+ +N ++ + + D LF E+ K + P+ ++Y
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSS 296
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C+ G A LL++M + + T++ +++ K+G EAE+L+ EM K+
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 234 VDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+D + Y+ I D + K++ + M PD ++YN L+ +CK + ++E
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+V+ + + G N T+ I L +G+ D A ++FKE V P+ T L++GL
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 353 VKKKKIKEAKGVIRTIKK-KFPPNVLRAWKKVEEELGLVPAPAVGDG 398
K K+++A V +++ K P + +E G+ A V DG
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE---GMCKAGKVEDG 520
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 150/335 (44%), Gaps = 10/335 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL---IESHKNDPKITQ 96
D D A ++ + + + P Y + + L K K D L +E+ P +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIY--NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
L + + +YG+ + A R M E V +F+AL+ A + + L+D
Sbjct: 294 YSSLISCLCNYGR---WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ K+ ++ P ++Y L+ C D+A ++ M +K VTY T++ K
Sbjct: 351 EMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISY 275
EE ++ EM ++G+ + YN+ I + GD + +E+ EM G+ P+ ++Y
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ CKN +++A V+E L+ + P T+ I +C +G + + +F +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD ++ G +K +EA + + +K+
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ QAG D A F +M G P +++++N LL ++ +K ++F E ++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRS 495
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +Y ++++ C +G + +L + KGV+ V Y T+++ ++G+ EEA
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPD 271
+ L+ EM++ G + YN I GD E ELI EMR G D
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 7/233 (3%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D LF E+ K P I + LL + D + L +M+N G+ TY+
Sbjct: 63 DDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRD 265
++NC ++ A + +M K G + ++ + + N Y +R+ E L+D+M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS-SLLNGY-CHSKRISEAVALVDQMFV 179
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +P+T+++N L+ + EA + + + GC P+ T+ + LC G+ D
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
A+ + + P +++GL K K + +A + + ++ K PNV+
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 37/296 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y G A R + +M G + +F L+ A R+ LFDE+ ++
Sbjct: 476 SLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ 535
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ P++++Y ++++ HC G++ KA ELLN+M KG+ T TY +++ L G E
Sbjct: 536 -NMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCE 594
Query: 222 AER-----------------------------------LWSEMEKKGVDLDVAAYNVRIT 246
A++ + EM K+GVD+D+ Y V I
Sbjct: 595 AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLID 654
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
T D + L+ M D L+PD + Y ++ Y K + +A +++ + + GC+P
Sbjct: 655 GTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTP 714
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
N T+ T I LC +G DKA ++KE ++ + P+ T ++ L ++ +++A
Sbjct: 715 NIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKA 770
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 155/347 (44%), Gaps = 6/347 (1%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE 86
++S LR + A D+ + V K A P S + + + L K +F + E L +
Sbjct: 333 ALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP--SLFVYNALINSLCKDGKFDEAELLFK 390
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRS 145
+ LI S+ + G D A+ +M G +V +N+L+ C
Sbjct: 391 EMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLG 450
Query: 146 RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
L V FDE+ K L P +SY L+ +C+ G +A L +EM KG+ T T
Sbjct: 451 NLSAAVS-FFDEMIDK-GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT 508
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMR 264
+TT+++ L++ +A RL+ EM ++ + + YNV I + G+ + EL+++M
Sbjct: 509 FTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMV 568
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
GL PDT +Y L++ C + EAKK + L N + ++ C G
Sbjct: 569 QKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLR 628
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
A V +E V D +L++G +K++ G+++ + +
Sbjct: 629 DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQ 675
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 2/279 (0%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+ E L +L+ + G A +++ ++G S+ +NAL+ + + +D+ +
Sbjct: 328 VPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAEL 387
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF E+ +K L + ++Y +L+ S C G D A+ L +M G+++T Y +++N
Sbjct: 388 LFKEMGEK-GLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
K GN A + EM KG+ V +Y I+ G L EM G+ P+T
Sbjct: 447 CKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNT 506
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++ L++ + M +A ++++ + E PN T+ I C GN KA+++ +
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V +PD T + L+ L ++ EAK I + ++
Sbjct: 567 MVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE 605
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 7/314 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ + L K+KR + + E C L+ + F+ D+M E
Sbjct: 265 NVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIE 324
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEI--PKKYNLSPDKISYGLLLKSHCDSGS 183
LG + + ++L+ R KV FD + KK P Y L+ S C G
Sbjct: 325 LGFVPTEAALSSLVEGLRRK---GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGK 381
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
D+A L EM KG+ VTY+ +++ ++G + A +M G+ + V YN
Sbjct: 382 FDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNS 441
Query: 244 RIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I + G+ DEM D GLKP +SY L++ YC + EA ++Y + G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK-KKIKEA 361
+PN TF T I L + A+++F E + + +P+ T +++EG K+ +K
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAF 561
Query: 362 KGVIRTIKKKFPPN 375
+ + + ++K P+
Sbjct: 562 ELLNQMVQKGLVPD 575
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 9/282 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R+ ++K+F D + H+ K+ + Y L+ Y + G A+ +M + G
Sbjct: 591 RVCEAKKFID-----DLHREHFKLNEMCY-SALLHGYCKEGRLRDALGVCREMVKRGVDM 644
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++ + L+ + + V L + + L PDK+ Y ++ + +GS KA +
Sbjct: 645 DLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQ-RLRPDKVIYTSMIDGYSKAGSVKKAFGI 703
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
+ M ++G VTYTT++N L K G ++AE LW EM + Y + +
Sbjct: 704 WDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAR 763
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G E+ +L ++M GL +T+SYN L+ +CK ++EA K+ + + +N P+ T
Sbjct: 764 EGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCIT 822
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ T IY C GN D A + + + PD L+ G
Sbjct: 823 YSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYG 864
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI--- 158
++I Y +AG A +D M + G +++++ L+ ++ L DK +L+ E+
Sbjct: 686 SMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVS 745
Query: 159 ---PKKY---------------------------NLSPDKISYGLLLKSHCDSGSSDKAL 188
P L + +SY +L++ C G ++A
Sbjct: 746 NSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEAT 805
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
+LL+EM + + +TY+T++ ++GN + A W M KG+ D AYN I
Sbjct: 806 KLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGC 865
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISY 275
G+ + EL D+M G+KP+ ++
Sbjct: 866 CIAGELGKAFELRDDMIRRGVKPNQATH 893
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 22/260 (8%)
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI-----------------SYG 172
S +SF L+ A + L+ L + + L P ++ +
Sbjct: 103 HSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFD 162
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL++S+ ++ + M + T VLN L K + L+ E+
Sbjct: 163 LLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSM 222
Query: 233 GVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
G+ D+ Y V + ++ + + KE+I M + L + + YN L+ CKN+ + E
Sbjct: 223 GIRPDIYIY-VAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWE 279
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++ GL + G + + T+ T + LC F+ V E + + +P + LVE
Sbjct: 280 AVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVE 339
Query: 351 GLVKKKKIKEAKGVIRTIKK 370
GL +K K+ +A ++ +KK
Sbjct: 340 GLRRKGKVVDAFDLVNRVKK 359
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 172/397 (43%), Gaps = 66/397 (16%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+AL +++ + +H +P Y + + K+ + ++ + E
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTS--LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + Q G + A R +M++ G SV+++NAL+ C ++ D + +L D K+
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED--MKE 443
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSPD +SY +L C S D+AL + EM KG++ T+TY++++ +Q +E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A L+ EM + G+ D Y I N Y GD E+ +L +EM + G+ PD ++Y+ L+
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALI-NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 280 T------------------------------------C--------------YCKNEMMD 289
C +C MM
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +V+E + P+ T + I+ C +G+ KAY ++KE V + TV LV
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEE 386
+ L K+ K+ E VI +VLR+ + E E
Sbjct: 683 KALHKEGKVNELNSVI--------VHVLRSCELSEAE 711
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 141/278 (50%), Gaps = 4/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
+++SY + + D A+ G V+S+NA+L A RS R +F E+ +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SP+ +Y +L++ C +G+ D AL L ++ME KG VTY T+++ K ++
Sbjct: 200 -QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L M KG++ ++ +YNV I G + + ++ EM G D ++YN L+
Sbjct: 259 GFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK +A ++ + +G +P+ T+ + I+ +C +GN ++A + + + P
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ T LV+G +K + EA V+R + F P+V+
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 155/341 (45%), Gaps = 10/341 (2%)
Query: 42 DKALDIYSSVSKHYASP--VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DKAL I H P +S D T+R SKR + + +++ +
Sbjct: 151 DKALSIVHLAQAHGFMPGVLSYNAVLDATIR----SKRNISFAENVFKEMLESQVSPNVF 206
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N LIR + AG D A+ FD+M+ G +V+++N L+ + R D L +
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K L P+ ISY +++ C G + +L EM +G + VTY T++ K+GN
Sbjct: 267 ALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
+A + +EM + G+ V Y I + G+ R E +D+MR GL P+ +Y
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + + M+EA +V + +NG SP+ T+ I C +G + A V ++
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD + ++ G + + EA V R ++K P+ +
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 137/267 (51%), Gaps = 8/267 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y + G F A+ +M G SVI++ +L+ + ++ ++ D++ +
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR- 374
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P++ +Y L+ G ++A +L EM + G + VTY ++N G E+A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN---TYGGDPE-RLKELIDEMRDAGLKPDTISYNFL 278
+ +M++KG+ DV +Y+ ++ +Y D R+K EM + G+KPDTI+Y+ L
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR---EMVEKGIKPDTITYSSL 491
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +C+ EA +YE + G P+ T+ I C G+ +KA ++ E V
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+PD T +L+ GL K+ + +EAK ++
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 153 ILFDEIPKKYNLSPDKIS-YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
++F + + Y+L S + L++KS+ DKAL +++ + G ++Y VL+
Sbjct: 118 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 177
Query: 212 CLYK-QGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
+ + N AE ++ EM + V +V YN+ I + G+ + L D+M G
Sbjct: 178 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 237
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ ++YN L+ YCK +D+ K+ + G PN ++ I LC G + V
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
E D T L++G K+ +A
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 153/315 (48%), Gaps = 7/315 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIESHK-NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ ++ L + R SD + + K +D K + Y+ L+ G +G M ++ M
Sbjct: 288 VVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYI-TLLDKCGDSGDSQSVMEIWNAMVA 346
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +++S+ A++ A C RL D+ +FDE+ +K +SP++ SY L+ +
Sbjct: 347 DGYNDNIVSYTAVVDALCQVGRL-DEALAVFDEMKEK-GISPEQYSYNSLISGFLKADMF 404
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D+ALEL N M G T+ +N K G + +A + + M+ KG+ DVAA N
Sbjct: 405 DRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAV 464
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+++ G K + E++D G+ PDTI+Y ++ C K DEA + + E GC
Sbjct: 465 LSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGC 524
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ + I L G ++A+K+F + + P T L+ GL ++ K+KE
Sbjct: 525 VPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMH 584
Query: 364 VIRTIKKKF-PPNVL 377
++ + PPN++
Sbjct: 585 LLEEMTHSIHPPNLI 599
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 167/335 (49%), Gaps = 18/335 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL ++ + + SP +Y+ + + K+ F L +H N + Y
Sbjct: 370 DEALAVFDEMKEKGISP--EQYSYNSLISGFLKADMFDRALELF-NHMNACGPSPNGYTH 426
Query: 102 NL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
L I YG++G A++ ++ M G V + NA+L + RS +F E+ K
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL-K 485
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SPD I+Y +++K + +D+A+ ++M G + ++++ LYK G
Sbjct: 486 DMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGN 545
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
EA +L+ ++++ ++ YN ++ G ++KE L++EM + P+ I+YN
Sbjct: 546 EAWKLFHQLKEMKIEPTNGTYNTLLSGL--GREGKVKEVMHLLEEMTHSIHPPNLITYNT 603
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C KN ++ A + + E GC+P+ +++ T +Y L F++A+++F + +
Sbjct: 604 VLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQ---MK 660
Query: 338 KI--PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
KI PD+ T+ ++ VK +KEA + T+K+
Sbjct: 661 KILAPDYATLCTILPSFVKNGLMKEA---LHTVKE 692
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 3/280 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+LC LIR + A + F++ LG S+N+L+ L D LF E+
Sbjct: 740 FLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEM 799
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ PD+ +Y L+L + S ++ L + EM KG E T VTY T+++ L K
Sbjct: 800 -KRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKR 858
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E+A L+ + +G Y + G + L +EM + G KP+ YN
Sbjct: 859 LEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNI 918
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + + +++E + E G +P+ ++ I LC +G + F++ + +
Sbjct: 919 LLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELG 978
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD LL++GL K ++I+EA + +KKK PN+
Sbjct: 979 LEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNL 1018
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 129/302 (42%), Gaps = 35/302 (11%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI------PKKY 162
Q G D A+ FD+M E G S+N+L+ ++ ++D+ LF+ + P Y
Sbjct: 365 QVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGY 424
Query: 163 ----------------------------NLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+ PD + +L S SG A + E+
Sbjct: 425 THVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYEL 484
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDP 253
++ GV T+TYT ++ C K A+EA +S+M + G DV A N I Y GG
Sbjct: 485 KDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKG 544
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+L ++++ ++P +YN L++ + + E + E + + PN T+ T
Sbjct: 545 NEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTV 604
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+ L +G + A + PD ++ ++ GL+K+++ +EA + +KK
Sbjct: 605 LDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKILA 664
Query: 374 PN 375
P+
Sbjct: 665 PD 666
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 4/251 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
++ + G++ + +R +M G + +++N ++ +S RL + + ++ + +
Sbjct: 814 ILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 873
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ SP +YG LL +G A L NEM G + Y +LN GN E
Sbjct: 874 F--SPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTEN 931
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ +M ++G++ D+ +Y V I T G ++ + GL+PD I YN L+
Sbjct: 932 VCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLID 991
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K+E ++EA ++ +++ G PN T+ + I HL +G +A ++++E ++ P
Sbjct: 992 GLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051
Query: 341 DFNTVKLLVEG 351
+ T L+ G
Sbjct: 1052 NVFTYNALIRG 1062
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 150/334 (44%), Gaps = 15/334 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
D A D+++ + + P + +L + + KS R + + E H+ + T Y
Sbjct: 790 DIAEDLFTEMKRLGCGP--DEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTY- 846
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I ++ + A+ + + G + ++ LL ++ LF+E+
Sbjct: 847 NTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEM-L 905
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+Y P+ Y +LL H +G+++ ++ +M +G+ +YT +++ L G
Sbjct: 906 EYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLN 965
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
+ + ++ + G++ D+ YN+ I G ER++E L +EM+ G+ P+ +YN
Sbjct: 966 DGLSYFRQLLELGLEPDLIIYNLLIDGL--GKSERIEEAVCLFNEMKKKGIVPNLYTYNS 1023
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ K EA ++YE L G PN T+ I SG+ D AY + + V V
Sbjct: 1024 LILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAY-DCVAV- 1081
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ L+ GLV + I A+G+ +K++
Sbjct: 1082 ---GVSLKTALISGLVDENLINIAEGLFAEMKRR 1112
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 143/351 (40%), Gaps = 43/351 (12%)
Query: 16 AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
AAG+ T S+ LRS P +AL+++++ ++ + V + + + + +
Sbjct: 68 AAGAGTGTESVV-----HMLRSAPGPAEALELFTAAARQ-PTAVHTTESCNYMLELMRAH 121
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
R D+ + + + + G G A M E G + ++
Sbjct: 122 GRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTY 181
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
N L++ +S +D + + + +SP +Y +L+ S D L LLNEME
Sbjct: 182 NGLIYFLVKSG-FDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEME 240
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV---------RIT 246
+GV+ +YT + L + +EA ++ +ME G DV + V R++
Sbjct: 241 ARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLS 300
Query: 247 N------------------TY---------GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ TY GD + + E+ + M G + +SY ++
Sbjct: 301 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVV 360
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
C+ +DEA V++ ++E G SP ++ + I + FD+A ++F
Sbjct: 361 DALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELF 411
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 123/295 (41%), Gaps = 42/295 (14%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
++A+D+Y ++ SP Y L L K+ + D E L + P T
Sbjct: 860 EQAIDLYYNLMSEGFSPTPCTYGPLLD--GLLKAGKMVDAENLFNEMLEYGCKPNCTIYN 917
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDE 157
L N R AG ++ + F++M E G + S+ L+ CT RL D +
Sbjct: 918 ILLNGHRI---AGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQL 974
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + L PD I Y LL+ S ++A+ L NEM+ KG+ TY +++ L K G
Sbjct: 975 L--ELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAG 1032
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRI---------TNTY------------------G 250
A EA +++ E+ KG +V YN I N Y G
Sbjct: 1033 KASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISG 1092
Query: 251 GDPERL----KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
E L + L EM+ G PD +YN ++ K+ ++E KV E + E+
Sbjct: 1093 LVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAED 1147
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-- 251
M G+ + TY ++ L K G EA ++ M + G+ V Y+V + ++G
Sbjct: 169 MREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMV-SFGKKR 227
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
D + + L++EM G+KP+ SY + + DEA ++ +E++GC P+ T
Sbjct: 228 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHT 287
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
I LC +G A VF + + PD
Sbjct: 288 VVIQVLCDAGRLSDAKDVFWKMKASDQKPD 317
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 166/350 (47%), Gaps = 43/350 (12%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
++ +HY V + + + LAK +++ + +++ K+ + E + C ++R Y
Sbjct: 45 WAEKQRHYNHSVKAFHT---VIDSLAKIRQYQLMWDVVKVMKSKRMVNVETF-CIIMRKY 100
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY----- 162
+A + A+ TF+ MD+ P ++ +FN LL A +S+ K +FD I ++
Sbjct: 101 ARAQKVEEAVYTFNIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSK 160
Query: 163 -------------NL---------------SPDKISYGLLLKSHCDSGSSDKALELLNEM 194
NL PD ++YG+++ C +G D+AL ++NEM
Sbjct: 161 TYSILLEGWGKDPNLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEM 220
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
++ + T Y+ +++ + E+A + EME G++ DVA YN I +
Sbjct: 221 DSTVCKPTPFIYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKAN-- 278
Query: 255 RLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
RLK +++EM G+ P++ ++N +++ DEA +V+ + + C P+A T+
Sbjct: 279 RLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIK-VCEPDADTYT 337
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
I C KA KV+K + +P +T ++L+ GL +K + +A
Sbjct: 338 MMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQA 387
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
D+AL I + + P Y+ + V R D + T +E N + Y
Sbjct: 211 DEALGIVNEMDSTVCKPTPFIYS--VLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYN 268
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI ++ +A + R ++MD G + +FN +L + D+ +F + K
Sbjct: 269 A-LIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIK 327
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD +Y +++K C+ KAL++ M+ K + T+ ++N L ++G+
Sbjct: 328 V--CEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVT 385
Query: 221 EAERLWSEMEKKGV 234
+A L EM +KG+
Sbjct: 386 QACVLLEEMIEKGI 399
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A+R M++ V+ + +++ + + R + LF ++ +
Sbjct: 180 LINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ- 238
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ S C+ LLN+M N + V ++TV++ L K+G EA
Sbjct: 239 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 298
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M +GV+ +V YN + + + + ++ D M G P+ ISYN L+
Sbjct: 299 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 358
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + MD+A ++E + + PN T+ T + H C G A +F E V +IPD
Sbjct: 359 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPD 417
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++L++ L KK + EA +++TI+
Sbjct: 418 LATYRILLDYLCKKSHLDEAMALLKTIE 445
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 3/254 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD M G +VIS+N L+ + + DK LF+E+ +K L P+ ++Y
Sbjct: 330 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK-ELIPNTVTYN 388
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C G A+ L +EM G TY +L+ L K+ + +EA L +E
Sbjct: 389 TLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 447
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+D D+ Y + I G+ E +++ + GL+P+ +Y ++ C+ ++DEA
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEA 507
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K++ ++ NGCSP+ T+ T L + +A ++ +E + D +T LLVE
Sbjct: 508 NKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 567
Query: 352 LVKKKKIKEAKGVI 365
L K + K ++
Sbjct: 568 LCDDKLDQSVKQIL 581
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P+ ++Y L+ HC D+A+++ + M + G ++Y T++N K ++A
Sbjct: 310 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 369
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
L+ EM +K + + YN + + G + L EM G PD +Y L+ C
Sbjct: 370 YLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 429
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K +DEA + + +E + P+ + I +C +G + A +F P+
Sbjct: 430 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 489
Query: 344 TVKLLVEGLVKKKKIKEAK 362
T +++ GL ++ + EA
Sbjct: 490 TYTIMINGLCRRGLLDEAN 508
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 160/345 (46%), Gaps = 5/345 (1%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
T ++++ + + E D D AL++ ++ H P + Y + ++ L ++R+ D
Sbjct: 234 TPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNY--NTVLKGLCSAERWGDA 291
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
+ L+ + E +I S + G+ A++ ++M + G +++++NA++
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 351
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
R D L ++ K Y PD ++Y LLK C + A EL++ M G
Sbjct: 352 LCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLP 410
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELI 260
VT+ T++ L ++G +A ++ +M KG + Y+ I+ ++ EL
Sbjct: 411 DNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELF 470
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+EM G PD I Y L C ++ ++EA + L+++G SP+ + + LC +
Sbjct: 471 NEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN 529
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
G + A + V +PD T +L+EGL + + EA+ ++
Sbjct: 530 GKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 130/300 (43%), Gaps = 47/300 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A+ D M G V+++N LL A + R Y + L D + +
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM-RAE 231
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL------------ 210
+P+ ++Y +L+ C G D ALELL + + G + +TV Y TVL
Sbjct: 232 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDA 291
Query: 211 ----------NC-------------LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT- 246
NC L ++G ++A +L +M K G ++ YN I
Sbjct: 292 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 351
Query: 247 -----NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
N G L+ +M+ G KPD ++YN L+ C +A+++ + + +N
Sbjct: 352 LCEQRNVDGA-----MGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQN 406
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC P+ TF T I LC G A +VFK+ P+ T ++ GL K K+ +A
Sbjct: 407 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 466
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 20/268 (7%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G D A+ + G S +++N +L C+ R D ++ + + + N P++
Sbjct: 251 GDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEML--RENCPPNEA 308
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
++ +++ S C G +A++LL +M G VTY ++N L +Q N + A L S+M
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368
Query: 230 EKKGVDLDVAAYNVRITNTYGG----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ G D+ YN + D E EL+D M G PD +++N L+ C+
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAE---ELMDNMTQNGCLPDNVTFNTLIGFLCQK 425
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+M +A +V++ + + GC+PN+ T+ T I L + D+A ++F E M HK FN
Sbjct: 426 GLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE--MGHK--GFNPD 481
Query: 346 K---LLVEGLVKKKKIKEAKGVIRTIKK 370
K LL E L I+EA I+T++K
Sbjct: 482 KIYQLLAECLNDDDTIEEA---IQTVRK 506
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 18/319 (5%)
Query: 60 SSRYAQDLTVRRLAKSKRFS------DIETLIESHKNDPKITQEPYLCNLIRSYGQAGMF 113
++R Q R L +R S D++ + ++ P+ L+R + G
Sbjct: 60 TTRQQQQAPRRLLGSDRRLSALVHRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRP 119
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A R + G +V+++ AL C RL D ++ + P+ +Y
Sbjct: 120 DDAERV---VGACGPAATVVAYGALTDGYCRAGRLGDARRVV-----GGMPVQPNAYTYN 171
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ + C+ G AL +L++M +G VTY +L K +A L M +
Sbjct: 172 PLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAE 231
Query: 233 GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G + YNV + G GD + EL+ + G KP T++YN ++ C E +A
Sbjct: 232 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDA 291
Query: 292 KK-VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
+ V E L EN C PN TF IY LC G +A ++ ++ + T ++
Sbjct: 292 DELVTEMLREN-CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 350
Query: 351 GLVKKKKIKEAKGVIRTIK 369
GL +++ + A G++ +K
Sbjct: 351 GLCEQRNVDGAMGLLSKMK 369
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 4/203 (1%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++YG L +C +G A ++ M V+ TY +++ L ++G +A + +
Sbjct: 136 VAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDD 192
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M +G DV YN+ + T G R ELID MR G P+ ++YN LM C
Sbjct: 193 MLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD 252
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D+A ++ L +GC P+ + T + LC + + A ++ E + + P+ T +
Sbjct: 253 VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 312
Query: 348 LVEGLVKKKKIKEAKGVIRTIKK 370
++ L +K +++A ++ + K
Sbjct: 313 VIYSLCRKGLLQQAIQLLEKMSK 335
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G + A R Q+ EL ++ ++NALL ++ ++ + L +E+ K L P++++
Sbjct: 316 GRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDK-GLEPNEVT 374
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ S C G D AL +L+ M KGV +T Y +++NC K+ + + A SEM
Sbjct: 375 YAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMV 434
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+ G+ + A+Y+ I GD EL +M + G+ +T ++ L+ +CK + MD
Sbjct: 435 EIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMD 494
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +++ + E+ PN TF I C G+ KA++++ + + PD T + L+
Sbjct: 495 EASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLI 554
Query: 350 EGLVKKKKIKEAK 362
GL +AK
Sbjct: 555 SGLCLTDGASKAK 567
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 157/342 (45%), Gaps = 10/342 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQE 97
D D A+ S + + +P ++ Y+ +A R D+ +E H+ + +
Sbjct: 422 DLDMAMGFLSEMVEIGLTPNAASYSP-----VIAGLCRKGDLSGAVELHRKMAEKGVAWN 476
Query: 98 PY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
Y LI + +A D A R F++M E + ++FNA++ K L+D
Sbjct: 477 TYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYD 536
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
++ + L+PD +Y L+ C + + KA E + ++EN + + T +L+ ++
Sbjct: 537 QMMCR-GLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCRE 595
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISY 275
G EA +W+EM G LD+ ++ + + D E+ L EM++ G++PD + +
Sbjct: 596 GRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
++ Y K M +A ++ + +G PN T+ + +LC S + A + KE +
Sbjct: 656 TCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLA 715
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
H +P+ T ++ + ++ AK + + + F N++
Sbjct: 716 SHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIV 757
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 135/302 (44%), Gaps = 4/302 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K ++F+ L + + + E IR+Y + D A +M + G S
Sbjct: 172 LVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVS 231
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ +N L++ C R+ + V + + + ++ D+++ L+ C + D ALE+
Sbjct: 232 AVPYNVLIYGLCKNQRVREAVDVKNSMLAR--GVAADEVTCRTLVYGFCRTEELDMALEM 289
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
+M G + + +L+ L K+G EEA RL ++ + + ++ AYN + N
Sbjct: 290 TGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCK 349
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G L++EM D GL+P+ ++Y L+ CK MMD+A + + + E G
Sbjct: 350 NGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYP 409
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ + I C + D A E V + P+ + ++ GL +K + A + R +
Sbjct: 410 YNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMA 469
Query: 370 KK 371
+K
Sbjct: 470 EK 471
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 145/338 (42%), Gaps = 6/338 (1%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D KA +Y + +P Y + L + S + + +N+ + +
Sbjct: 527 DIRKAFQLYDQMMCRGLTP--DNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFS 584
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L L+ + + G A +++M G +ISF +++A + +K +LF E+
Sbjct: 585 LTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMK 644
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+K + PD + + ++ + G+ +AL +EM G TVTYT ++N L K +
Sbjct: 645 EK-GVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHL 703
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
AE L EM + +N + G+ E K+L M G + +S N L
Sbjct: 704 SSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTL 762
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + EA + ENG P+ ++ T I+ LC G+ ++A +++ E +
Sbjct: 763 IKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGV 822
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPN 375
PD +L+ + + G+ I +KK PN
Sbjct: 823 KPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPN 860
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERL 256
G+ T + +L L K A L+ M GV LD Y I + +
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
K L+ M+D G K + YN L+ CKN+ + EA V + G + + T RT +Y
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA------KGVIRTIKK 370
C + D A ++ + + +P +++GL KK +++EA G +R +
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336
Query: 371 KFPPNVL 377
F N L
Sbjct: 337 IFAYNAL 343
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 149/346 (43%), Gaps = 40/346 (11%)
Query: 53 KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGM 112
KH P +R + + L R SD + L E L+ + + G
Sbjct: 3 KHGFWP--NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD + G V+++NAL+ ++ D+ + + + NL PD ++Y
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-NLVPDVVTYN 119
Query: 173 LLLKSHCDSGSSDKA---------------------------------LELLNEMENKGV 199
L+ C +G D+A L+L + +G
Sbjct: 120 SLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGY 179
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKE 258
E TY +++ L K+ EA L+S + K G++ D Y V I G E
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALL 239
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
++ +M + G PD +S+N ++ CK + +DEA+ + G+E GCSPNA +F T I C
Sbjct: 240 MLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK---KIKEA 361
+G + KA FKE + P T +LV+GL K + +IKEA
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 135/279 (48%), Gaps = 9/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ G A +++M + G V+++N LL + D+ +FD K+
Sbjct: 16 LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKR- 74
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y L+ C + D+A +L M ++ + VTY +++N L K G +EA
Sbjct: 75 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA 134
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT---YGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
L + KG +V Y+ I+ G E LK L + G +P+ +YN L+
Sbjct: 135 RMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALK-LFGSVLKQGYEPEVPTYNILI 190
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K + ++EA +++ GL ++G P+A T+ +I LC +G + A + K+ +
Sbjct: 191 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 250
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD + ++ GL K+K++ EA+ ++ ++ K PN +
Sbjct: 251 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 289
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 15/301 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKI----TQEPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
V L K+ R + LI P + T LC +R +A ++ F +
Sbjct: 122 VNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEA------LKLFGSVL 175
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+ G V ++N L+ + ++ LF + K + L PD I+Y + + C +G
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK-HGLEPDAITYTVFIDGLCKAGRV 234
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+ AL +L +M+ KG V++ V+N L K+ +EAE L S ME KG + ++N
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM---MDEAKKVYEGLEE 300
I G ++ EM G+KP ++YN L+ CK + EA +++ + E
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G P+ T+ I L +G D A ++ IP+ T L+ GL +K+ E
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414
Query: 361 A 361
A
Sbjct: 415 A 415
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+K+ P++I+Y LL C+ G A L M G VTY T+L+ K G
Sbjct: 2 RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGEL 61
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFL 278
+EA +++ K+G DV YN I D + + ++ M L PD ++YN L
Sbjct: 62 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSL 121
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS-GNFDKAYKVFKESVMVH 337
+ CKN +DEA+ + + + G SPN T+ T I LC +A K+F +
Sbjct: 122 VNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQG 178
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEA 361
P+ T +L++GL+K+ ++ EA
Sbjct: 179 YEPEVPTYNILIDGLLKEDRVNEA 202
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M K G + YN ++ GG + L + M AG PD ++YN L+ +CK
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+DEA K+++G + G P+ T+ I C + D+A ++ + V + +PD T
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
LV GL K ++ EA+ +I + K F PNV+
Sbjct: 121 LVNGLCKNGRVDEARMLI--VDKGFSPNVI 148
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 7/243 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A +++S + KH P + Y + + L K+ R D +++ +
Sbjct: 200 NEAFELFSGLVKHGLEPDAITYT--VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 257
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + D A M+ G + ISFN L+ R+ + K F E+ K+
Sbjct: 258 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 317
Query: 162 YNLSPDKISYGLLLKSHCDS---GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ P ++Y +L+ C + G +A+ L + M KG VTY+ +++ L K G
Sbjct: 318 -GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGK 376
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
++A RL ME KG +V YN I+ G + + EL M + G PDTI+Y
Sbjct: 377 LDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGT 436
Query: 278 LMT 280
+++
Sbjct: 437 IIS 439
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--- 250
M G +TY +L+ L G +A+ L+ M K G DV YN T +G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYN---TLLHGFCK 57
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ + ++ D G PD ++YN L+ +CK + +DEA+++ + + P+ T
Sbjct: 58 VGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVT 117
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK-KKIKEAKGVIRTI 368
+ + + LC +G D+A + + P+ T L+ GL ++ + + EA + ++
Sbjct: 118 YNSLVNGLCKNGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRGVSEALKLFGSV 174
Query: 369 -KKKFPPNV 376
K+ + P V
Sbjct: 175 LKQGYEPEV 183
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 163/327 (49%), Gaps = 13/327 (3%)
Query: 54 HYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMF 113
HY V + + + LAK +++ + LI + K + E + C ++R Y +A
Sbjct: 51 HYTHSVRAYHTM---IESLAKIRQYQIMWDLINAMKRKRMLNVETF-CIIMRKYARAQKL 106
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A+ TF+ M++ P ++ +FN L A +S+ K +FD ++ PD +Y +
Sbjct: 107 EEAVYTFNVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRF--VPDSKTYTI 164
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LL+ + + KA E+ EM + G VTY +++ L K G +EA + EM+
Sbjct: 165 LLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTI 224
Query: 234 VDLDVAAYNVRITNTYGGDPERLKELIDE---MRDAGLKPDTISYNFLMTCYCKNEMMDE 290
Y+V I +TYG + R+++ +D M G+K D +YN L+ +CK
Sbjct: 225 CKPTSFIYSVLI-HTYGIE-NRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKN 282
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
+V ++ G PN+ T + +L G D+A++VF+ + V + PD +T ++++
Sbjct: 283 VYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKVCE-PDADTYTMMIK 341
Query: 351 GLVKKKKIKEAKGVIRTIKKK-FPPNV 376
++ +++ A V + +KKK F P++
Sbjct: 342 MFCERNELEMALKVWKYMKKKHFVPSM 368
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A R F +M ++ P + + C R+ L + + + KK + P +
Sbjct: 313 GETDEAFRVFRRMIKVCEPDADTYTMMIKMFCERNELEMALKVW--KYMKKKHFVPSMHT 370
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
+ +L+ C+ G A +L +M KG+ + VT+ + + L K+G + E L
Sbjct: 371 FSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEGREDVLEFL 425
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 186/394 (47%), Gaps = 17/394 (4%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE 82
++S+ + L+ + DP KAL++++ V + S +++L F +E
Sbjct: 2 SASLLPKHVAAVLKQQKDPLKALEMFNKVKREDGFK-HSLLTYKCIIQKLGFHGNFVAME 60
Query: 83 TLIESHKND--PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
++ + D + + Y+ ++SYG+ G A+ F++MD SV+S+NA++
Sbjct: 61 NVLAETRMDIDNSLLEGVYI-GAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMN 119
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
S + + +F + K + PD ++ + +KS C + AL LLN M ++G +
Sbjct: 120 ILVESGYFKQAHKVFLRM-KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQ 178
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKEL 259
+ V Y TV+ Y++ EA L+++M + G+ DV+ +N + T G+ + + L
Sbjct: 179 LNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERL 238
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
++++ G+ + ++N + C+ M+ A + + + G +P+ T+ T I LC
Sbjct: 239 LNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCK 298
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPP---- 374
+ N +A K + V PD T L++G K ++ A+ +++ I K F P
Sbjct: 299 NSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFT 358
Query: 375 -----NVLRAWKKVEEELGLVPAPAVGDGQKARV 403
N L +++ L L A A+G G K V
Sbjct: 359 YCSLINGLCQNDEIDRALALFNA-ALGKGLKPTV 391
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 142/335 (42%), Gaps = 43/335 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ Q G+ A++ ++M E G + ++N ++ C + D ++ D I K
Sbjct: 397 LIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKG 456
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ L+ +C + +++LN+M + GV +TY +VLN L K E+
Sbjct: 457 Y--VPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTIS----- 274
+ M +KG + YN+ +T + G +L+DE+ + G+ PDT+S
Sbjct: 515 LMETFETMVEKGCVPNKITYNI-LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Query: 275 -------------------------------YNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
YN ++ + + + +K++ + GC
Sbjct: 574 SGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGC 633
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+P+ T+R I C +GN D YK E + IP T ++ L + ++ EA
Sbjct: 634 APDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVD 693
Query: 364 VIR-TIKKKFPPNVLRAWKKVEEELGLVPAPAVGD 397
+I + P V+ + + ++++ P V D
Sbjct: 694 IIHFMVHNGIVPEVVNSISEADKKVVAAPKIVVED 728
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 10/275 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + GM +A + G ++ +L+ ++ D+ LF+ K
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGK- 385
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P I Y +L+K C G +AL+++NEM G TY V+N L K G +A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNF 277
L ++ KG DV +N I G ++LK +++++M G+ PD I+YN
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLID----GYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K ++ + +E + E GC PN T+ LC +G ++A + E +
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
PD + ++ G +K A + R + +++
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 2/258 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G + R +++ + G ++ +FN + R + + D + ++
Sbjct: 222 LLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE- 280
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++Y L+ C + + +A + L+++ N G+E TY T+++ K G + A
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E++ KG D Y I D +R L + GLKP I YN L+
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ ++ +A ++ + ENGCS + T+ I LC G A + +++ +PD
Sbjct: 401 LCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPD 460
Query: 342 FNTVKLLVEGLVKKKKIK 359
T L++G K+ K++
Sbjct: 461 VFTFNTLIDGYCKQLKME 478
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 112/259 (43%), Gaps = 56/259 (21%)
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
M TF+ M E G VP +KI+Y +L +
Sbjct: 516 METFETMVEKGC----------------------VP--------------NKITYNILTE 539
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVD 235
S C +G ++AL+L++E+ NKG+ TV++ T+++ G+ + A +L+ M E+ V
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599
Query: 236 LDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
A YN+ I N + D ++L EM G PDT +Y ++ +C D K
Sbjct: 600 HTTATYNIMI-NAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYK 658
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPD-FNTV----- 345
+ E G P+ TTF I LC +A + MVH +P+ N++
Sbjct: 659 FLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH--FMVHNGIVPEVVNSISEADK 716
Query: 346 ------KLLVEGLVKKKKI 358
K++VE L+K+ I
Sbjct: 717 KVVAAPKIVVEDLLKRSCI 735
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A F+++ + G + +SFN L+ +SR D+ + ++
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE-GFRLKKTMEEN 287
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y +L+ C G D A +L +EM+ +G+ +T+T +++ Y+ + A
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSA 347
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M GV D+ YN + GD + ++L+DEM+ G+KPD I+Y L+
Sbjct: 348 MNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDG 407
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK ++ A ++ +G+ E G + F I C G A + +E V PD
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++++G KK +K +++ ++
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQ 495
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 8/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A + FD+M + G + I+F AL+ RSR D + ++
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM-LTM 357
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD + Y LL C G +KA +L++EM+ G++ +TYTT+++ K+G+ E A
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESA 417
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M ++GV LD A+ I+ G + + EM +AG+KPD +Y ++
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + K+ + ++ NG P T+ + LC G A + + + + PD
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPD 537
Query: 342 FNTVKLLVEGLVKKK------KIKEAKGVI 365
T +L+EG K K++ KG+I
Sbjct: 538 DITYNILLEGHCKNGKAEDLLKLRNEKGLI 567
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 1/202 (0%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+Y P Y +L+ C GS A + NE+ +G+ TTV++ T++N L K N +
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
E RL ME+ + DV Y+V I G + ++L DEM+ GL+P+ I++ L+
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
++ MD A Y + G P+ + T + LC G+ +KA K+ E MV
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
PD T L++G K+ ++ A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESA 417
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ L+ ++ DSG A++ + N ++ +L+ + + +SE+
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+ G V YN+ I G K + +E+R GL+P T+S+N L+ CK+ +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
E ++ + +EEN P+ T+ I+ LC G D A ++F E P+ T L+
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 350 EGLVKKKKIKEA 361
+G + +++ A
Sbjct: 336 DGQYRSRRMDSA 347
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%)
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
P + E+ + G P YN L+ +CK + +AK ++ + + G P +F T
Sbjct: 204 PVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNT 263
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I LC S N D+ +++ K PD T +L+ GL K+ ++ A+ + ++++
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322
>gi|413948334|gb|AFW80983.1| hypothetical protein ZEAMMB73_782047 [Zea mays]
Length = 436
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 3/283 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S G D A + +LG + +S+N +L + ++ DE+ +
Sbjct: 132 LLHSLVCNGRVDAARDMLPEAPKLGVRTNAVSYNIILKGVCHRDGFSGARVVLDEMLAR- 190
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +++ L+ S C G A L++EM +GV VTY ++ L G ++A
Sbjct: 191 GVRPTVVTFNTLVGSACREGELAAAERLVDEMTRRGVAPNAVTYALLMQGLCDAGRYDDA 250
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L +ME + DVA Y V ++ GD + +K LI +MR +KPD SYN L+ C
Sbjct: 251 KKLLFDMEYRDCQPDVANYGVLMSACAACGDADGVKGLISDMRKRKMKPDDASYNVLIRC 310
Query: 282 YCKNEMMDEAKKVYEGLE-ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C +DEA + ++ ++G +P+A T+R + C + +FD +VF +
Sbjct: 311 LCDAGRVDEAHRALVEMQLKDGTAPSAATYRVLLDGCCEARDFDLGLRVFNAMLASGHCS 370
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
T + LV GL + K +EA V+ + ++ + W+ V
Sbjct: 371 LPPTFRRLVRGLGEDGKAEEACFVLEQMGQRGMRLDAQGWQSV 413
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 1/171 (0%)
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELI 260
+ T+ +L+ L G + A + E K GV + +YN+ + D + ++
Sbjct: 125 SNATFHALLHSLVCNGRVDAARDMLPEAPKLGVRTNAVSYNIILKGVCHRDGFSGARVVL 184
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
DEM G++P +++N L+ C+ + A+++ + + G +PNA T+ + LC +
Sbjct: 185 DEMLARGVRPTVVTFNTLVGSACREGELAAAERLVDEMTRRGVAPNAVTYALLMQGLCDA 244
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G +D A K+ + PD +L+ KG+I ++K+
Sbjct: 245 GRYDDAKKLLFDMEYRDCQPDVANYGVLMSACAACGDADGVKGLISDMRKR 295
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 140/269 (52%), Gaps = 5/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + AG D AM D + +G +V+++ AL+ A R++ ++ L +E+ ++
Sbjct: 153 IITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM-RER 208
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++Y +L+ + C A +++ +M G +T+ ++++ K+GN ++A
Sbjct: 209 GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDA 268
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L M KG+ +V Y+ I KE+++EM+ G+ PD +Y+ L+
Sbjct: 269 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHG 328
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + ++EA+++ + +GC+P+ + + I+ C SG +A K +E K PD
Sbjct: 329 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +++GL K KI EA+ ++ +++
Sbjct: 389 VVTYNTVIDGLCKLGKIAEAQVILEQMQE 417
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ F A ++M G +++AL+ ++ ++ + +
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS- 348
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD + Y ++ + C SG +A + L EM + VTY TV++ L K G EA
Sbjct: 349 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 408
Query: 223 ERLWSEMEKKGVDL-DVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
+ + +M++ G L DV Y+ I D ++L+D M AG PD ++Y ++
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK ++EA+ + +G++ GC+PN T+ T I LC + D+A +V +E P
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ T +V GL +IKEA+ +++ +K
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMK 557
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 116/246 (47%), Gaps = 5/246 (2%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G + S+N+LL R + + + LF + PD SY +++ C++G
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRS-ELLASCEPDVCSYNIVISGFCNAGDLHA 130
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
ALELL EM++ G T+T ++ + G+ + A + G D +V Y I
Sbjct: 131 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIA 187
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E +L++EMR+ G P+ ++YN L+ CK M+ A+ V + + E G +P
Sbjct: 188 AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 247
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N TF + + C GN D A K+ V P+ T L++GL K +K EAK V+
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
Query: 366 RTIKKK 371
+K +
Sbjct: 308 EEMKTR 313
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 8/280 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + M A +M E G +V++FN+L+ C R + D +L + K
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK- 278
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y L+ C S +A E+L EM+ +GV TY+ +++ L K EE
Sbjct: 279 -GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEE 337
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE++ M G DV Y+ I + + G ++ + EMR PD ++YN ++
Sbjct: 338 AEQMLRRMAGSGCTPDVVVYS-SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 396
Query: 280 TCYCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
CK + EA+ + E ++E+G P+ T+ T I LC S +A K+
Sbjct: 397 DGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 456
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD T +++GL K +++EA+ +++ +K+ PNV+
Sbjct: 457 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I ++ ++G A +T +M + V+++N ++ + + ++ +++ +
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ PD ++Y ++ C S +A +LL+ M G VTYTT+++ L K G EE
Sbjct: 419 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 478
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE L M++ G +V Y I+ + + +++EMR+AG P+ ++YN ++
Sbjct: 479 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 538
Query: 281 CYCKNEMMDEAKKVYEGLEEN--GCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
C + + EA+++ + +++ CSP+A T+RT + L S +A ++ ++
Sbjct: 539 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 592
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 130/279 (46%), Gaps = 8/279 (2%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
EP +C+ +I + AG A+ ++M G + ++ A + D
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA-- 166
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
D + + P+ ++Y L+ + + ++A++LL EM +G VTY +++ L
Sbjct: 167 -MDHL-RSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDAL 224
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
K A+ + +M + G +V +N + G+ + ++L+ M G++P+
Sbjct: 225 CKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 284
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++Y+ L+ CK++ EAK+V E ++ G +P+A T+ I+ LC + ++A ++ +
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD ++ K K+ EA+ ++ ++K+
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ 383
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G + A M G +V+++ L+ ++R D+ + +E+ +
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM-RNA 524
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNAE 220
P+ ++Y ++ C SG +A +L+ M++ E + TY T++N L +
Sbjct: 525 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQ 584
Query: 221 EAERLWSEME 230
EAE+L +M+
Sbjct: 585 EAEQLLEQMK 594
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 164/340 (48%), Gaps = 4/340 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKI-TQEPY 99
D A I+ K++ + + +L++++ F +E+L+ + +N I +
Sbjct: 29 DLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDV 88
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
++IR+YG AG A++TF ++ +E SV N LL +++ Y V
Sbjct: 89 FISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNC 148
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
KY + P+ S+ +L+K+ C + AL++ +EM G+ VTYTT+L +G+
Sbjct: 149 KDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGD 208
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
AE+++SE+ KG D Y V + G +++D M G++P+ ++Y
Sbjct: 209 LVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGV 268
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ YCK + EA+ + + + + P++T I LC G + A ++K + +
Sbjct: 269 MIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKN 328
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+PD + L+ L K+ K+ EA+ + ++ P+++
Sbjct: 329 CLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLM 368
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 142/296 (47%), Gaps = 13/296 (4%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRT 119
++ ++ ++ L K +D+E ++ P + P L ++ + G +A +
Sbjct: 159 FSFNILIKALCKK---NDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKV 215
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYN-LSPDKISYGLLLKS 177
F ++ + G ++ L+ C + RL D + ++ + +YN + P++++YG+++ +
Sbjct: 216 FSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDN---MEYNGVEPNEVTYGVMIDA 272
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+C S +A L+++M +K ++ V++ L + G E A LW M +K D
Sbjct: 273 YCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPD 332
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
A + I G ++L DE + G P ++YN L+ C+ ++EA ++++
Sbjct: 333 NAIMSTLIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWD 391
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ E C PNA T+ I +G + ++ +E + +P+ +T LL+EGL
Sbjct: 392 DMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G A + FD+ ++ GT S++++N L+ C R L ++ L+D++ +K
Sbjct: 339 LIHWLCKEGKVWEARKLFDEFEQ-GTIPSLMTYNTLIAGMCERGEL-NEAGRLWDDMVEK 396
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +Y +L+K +G + + +L EM + G TYT ++ L + G +
Sbjct: 397 -RCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGD 455
Query: 222 AERLWS-EMEKKGVDLD 237
+++ S M + VD D
Sbjct: 456 VDKVMSMAMASREVDAD 472
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 144/309 (46%), Gaps = 21/309 (6%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT--- 128
LAK F L++ + + LIR Y +A M A F +M+E G
Sbjct: 154 LAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRMEEYGAGAP 213
Query: 129 -PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P ++ S LL A ++ RL + +FD K +PD + Y L+ + C SG ++A
Sbjct: 214 DPATLAS---LLGALSKKRLASEAQAMFDSY--KSVFTPDVVLYTTLVHAWCRSGRLNEA 268
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRIT 246
+ EM+ GV TYT V++ +Y+ G A+ L +M G + A +N +
Sbjct: 269 ERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRA 328
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC--KNEMMDEAKKVYEGLEENGCS 304
+ G E++ ++ ++MR G +PD I+YNFLM +C +D A K+ + GC
Sbjct: 329 HVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCI 388
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL---------VEGLVKK 355
P+ TF + + GN + A K+++ + P+ T LL ++ +++
Sbjct: 389 PDCHTFNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRI 448
Query: 356 KKIKEAKGV 364
KK +A+GV
Sbjct: 449 KKDMDAQGV 457
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 165/343 (48%), Gaps = 13/343 (3%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKR 77
S ++ + ++ + +R+E P +A D++ + ++ A +P + A L L+K +
Sbjct: 174 SVPISAQLILALIRRYVRAEM-PSEASDLFRRMEEYGAGAPDPATLASLLGA--LSKKRL 230
Query: 78 FSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
S+ + + +S+K+ P + L+ ++ ++G + A R F +M + G +V ++
Sbjct: 231 ASEAQAMFDSYKSVFTPDVV---LYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTY 287
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
A++ A R+ + L ++ P+ ++ ++++H +G S++ L++ N+M
Sbjct: 288 TAVIDAMYRAGQVPRAQELLCQMIDS-GCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMR 346
Query: 196 NKGVEVTTVTYTTVL--NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
G E +TY ++ +C Q N + A ++ + M KG D +N + G+
Sbjct: 347 QLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGN 406
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
++L + M++ KP+ ++YN LM + + MD ++ + ++ G PN T+
Sbjct: 407 VNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAA 466
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
I CG GN+ +A+ +E V + V +V L++K
Sbjct: 467 LIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRK 509
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMR 264
Y +++ L K + A L EM ++ V + I + P +L M
Sbjct: 147 YAAMIDLLAKHHHFPLARHLLDEMRERSVPISAQLILALIRRYVRAEMPSEASDLFRRME 206
Query: 265 DAGL-KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+ G PD + L+ K + EA+ +++ + + +P+ + T ++ C SG
Sbjct: 207 EYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYK-SVFTPDVVLYTTLVHAWCRSGRL 265
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
++A +VF E P+ T +++ + + ++ A+ ++ + I PPN
Sbjct: 266 NEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPN 318
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 8/266 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI+ + G D A+ F M E +P +VI++N ++ ++ D+ LFD++ K+
Sbjct: 151 TLIQGLCRKGRIDEALEQFKSMGEECSP-NVITYNTVVNGLCKANRIDEALELFDDMEKR 209
Query: 162 YNLS----PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
Y S PD ISY ++ + C + DKA E M G VTY+++++ L K
Sbjct: 210 YEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVD 269
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYN 276
E L M++KG +++ +N + + D E+ + + + +G KP+ ++YN
Sbjct: 270 RPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYN 329
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+ CK +DEA ++ + E+ +P+ T+ + I C +G DKA VF +MV
Sbjct: 330 VAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTR-MMV 388
Query: 337 HK-IPDFNTVKLLVEGLVKKKKIKEA 361
H+ IP T L+ G + KK +EA
Sbjct: 389 HECIPHPVTFMTLLHGFSEHKKSREA 414
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 155/349 (44%), Gaps = 9/349 (2%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE 82
AS+++ A L+ DPD A + ++ Y + + K+KR +
Sbjct: 38 ASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNA-YTCAVLLNAFVKAKRHEEAH 96
Query: 83 TLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC 142
L++ E +I + +AG D A D+M E G V+ + L+
Sbjct: 97 RLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGL 156
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK----- 197
R D+ F + ++ SP+ I+Y ++ C + D+ALEL ++ME +
Sbjct: 157 CRKGRIDEALEQFKSMGEE--CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASH 214
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERL 256
G E ++Y+TV++ L K ++A + M G +V Y+ I D P
Sbjct: 215 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSEC 274
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
EL+ M++ G + I +N ++ KN+ ++A + +E L ++G PN T+ ++
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHG 334
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
LC +G D+AY++ E V PD T +++G K ++ +A V
Sbjct: 335 LCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVF 383
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 4/256 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A + F+++ + G +V+++N + C R+ + IL + + K ++PD I+Y
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK--VTPDVITYS 364
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
++ C +G DKA ++ M VT+ T+L+ + + EA R+ +M
Sbjct: 365 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 424
Query: 233 GVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G + YNV + G D E E+ +M+ +PD +Y L+ C C+ +DEA
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K+ + +E + PN + LC G D+A V V V P T K+LVE
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEE 544
Query: 352 LVKKKKIKEAKGVIRT 367
L +KK + A ++R+
Sbjct: 545 LYLRKKWEAASKLLRS 560
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 124/273 (45%), Gaps = 10/273 (3%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M E G ++I FNA+L A ++ +K F+ + K P+ ++Y + + C +
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKS-GKKPNVVTYNVAVHGLCKA 338
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G D+A +L EM V +TY+++++ K G ++A+ +++ M + +
Sbjct: 339 GRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVH----ECIPH 394
Query: 242 NVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
V G E K + ++M +AG P +YN LM C C + ++ A ++Y
Sbjct: 395 PVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYH 454
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
++ P+ T+ I LC + D+A + + +P+ LVE L K+
Sbjct: 455 KMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQG 514
Query: 357 KIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
++ EA V+ + + + +K + EEL L
Sbjct: 515 EVDEACSVLDNVVEVGCQPLGETFKILVEELYL 547
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++ L+ R+R D+ D + + N+ P+ L++ C G D+A +L+
Sbjct: 467 TYAPLIQCLCRARRVDEAKEFLD-VMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGD 252
+ G + T+ ++ LY + E A +L + G D A Y++ + G
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGK 582
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
P+ E+I++M G++PD +Y ++ C + ++ A +E + GC+P T+
Sbjct: 583 PDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTL 642
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
I C + D+A+++F+ V P T++ L
Sbjct: 643 LIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 131/347 (37%), Gaps = 44/347 (12%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKIT 95
+ +KA + + K P Y ++ V L K+ R + + ++ES IT
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTY--NVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT 362
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
++I + +AG D A F +M ++F LL + + + +
Sbjct: 363 YS----SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVH 418
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+++ P +Y +L+ C + S + ALE+ ++M+ K + TY ++ CL +
Sbjct: 419 EDMVNA-GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477
Query: 216 QGNAEEAERLWSEMEKKGV------------------DLDVAAYNVRITNTYGGDP--ER 255
+EA+ ME V ++D A + G P E
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537
Query: 256 LKELIDEM-------------RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
K L++E+ R G D +Y+ + CK DEA +V E + G
Sbjct: 538 FKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG 597
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
P+ T+ + LCG + A F++ P T LL+
Sbjct: 598 VRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLI 644
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%)
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G + + + L+ + K + +EA ++ + E C PN + T I C +G D+A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+++ E D L++GL +K +I EA +++ ++ PNV+
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVI 181
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 3/253 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G V +FN L+ S+ D +F+E+ K PD+ +Y +L+ S C +
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK-GCKPDEFTYSILIDSLCYERRLKE 421
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL LL EME+ G V Y T+++ L K E+AE ++ +ME GV YN I
Sbjct: 422 ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481
Query: 247 NTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E +L+D+M GLKPD +YN L+T +C+ +++A + + + NGC P
Sbjct: 482 GLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I LC +G D A K+ + M + + +++ L +K+ KE +
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLF 601
Query: 366 R-TIKKKFPPNVL 377
R ++K PP+ L
Sbjct: 602 REMMEKSDPPDAL 614
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 148/358 (41%), Gaps = 43/358 (12%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
SS + H P + Q L +S F I TL++ K+ I LI+S+
Sbjct: 48 SSTTHHPLPPNETLLLQ------LTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFT 101
Query: 109 QAGMFDHAMRTFD---------------------------------QMDELGTPRSVISF 135
++ ++ + +M G V +F
Sbjct: 102 NFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTF 161
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
N L+ A ++ ++ +E+ + L PD+I++ L++ + G + AL++ +M
Sbjct: 162 NVLIKALCKAHQLRPAILMLEEM-ANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDP 253
G +T V+ ++N K+G EEA R E+ ++G D +N + N + G+
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFN-SLVNGFCRIGNV 279
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+++D M + G PD +YN L++ CK ++A ++ + + CSPN T+ T
Sbjct: 280 NDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTL 339
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I LC + A + + V +PD T L++GL K A + +K K
Sbjct: 340 ISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 138/326 (42%), Gaps = 11/326 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
+ D A++++ + P + + + L +R + L++ ++
Sbjct: 383 NQDIAMEMFEEMKNKGCKP--DEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI ++ + A FDQM+ LG RS +++N L+ +++ ++ L D++
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ L PDK +Y LL C G +KA +++ M + G E TY T++ L + G
Sbjct: 501 ME-GLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRV 559
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
+ A +L ++ KG+ L AYN I + +R KE L EM + PD +++
Sbjct: 560 DVASKLLRSVQMKGIVLTPHAYNPVIQALFM--RKRTKEGMRLFREMMEKSDPPDALTHK 617
Query: 277 FLMTCYCKNEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ C + EA + E G P +F LC D ++ +
Sbjct: 618 IVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVME 677
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
++ + T ++ G +K +K +A
Sbjct: 678 KAQMSERETS--MIRGFLKIRKFNDA 701
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y A F++M + G V+++N L+ ++++ D+ +LF E+ K
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK- 364
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL P SY L+ C+SG +LL+EM VTY +++ L K+G EA
Sbjct: 365 NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M KKGV ++ YN + + K++ + M +GL+PD ++YN L+
Sbjct: 425 LGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLING 484
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK EM+DEA +++ + P+ ++ + I LC G ++ E + PD
Sbjct: 485 YCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPD 544
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
T +L++ K + +A + R I + P+
Sbjct: 545 VITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +G H + D+M P V+++N L+ A C R+ + + +L + K
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV--MMMK 433
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y ++ +C + + A ++ N M G+E + Y ++N K +E
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDE 493
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM K + D+A+YN I G ++EL+DEM D+G PD I+YN L+
Sbjct: 494 AIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Query: 281 CYCKNEMMDEA----KKVYEG------------------------------LEENGCSPN 306
+CK + D+A +++ EG L +GCSPN
Sbjct: 554 AFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPN 613
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
T+ I LC G+F +A + + + PD T ++++ L+++ + +A+
Sbjct: 614 VQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+ +M++ +++ ++AL+ + L +I ++
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER- 224
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D ++Y L+ C G + +LL +M + V+ T+ +++ L K+G EA
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + + M K+G D+ YN + + +EL + M GL+PD ++YN L+
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +M+DEA +++ L P ++ + I LC SG K+ E + PD
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
T +L++ L K+ +I EA GV + +KK PN++
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIV 441
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 8/333 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDL-TVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
D A+ ++ + + + P +S + + L + R+ + T ++S P I
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT---F 93
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
LI Y A + + G ++++FN ++ C ++ + + +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ Y D+ +YG L+ +G AL LL EME V+ V Y+ +++ L K G
Sbjct: 154 QGYLF--DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
+A L S++ ++G+ LD YN I G + + +L+ +M + PD ++N L
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNIL 271
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + EA+ V + + G P+ T+ + C N +A ++F V
Sbjct: 272 IDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGL 331
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD +L++G K K + EA + + + K
Sbjct: 332 EPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 134/331 (40%), Gaps = 9/331 (2%)
Query: 55 YASP---VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---YLCNLIRSYG 108
YA P +SSR+ + K+ RF +++ + ++ P L+ +
Sbjct: 7 YAIPKFSISSRFFGHFQPQNPHKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIV 66
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+ G + A+ F Q+ G S+ +F +L C + + K P+
Sbjct: 67 RMGHYPTAISLFTQLQSKGISPSIATF-TILINCYFHQSHTAFAFSLLATILKSGYQPNL 125
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ ++ C +G KAL+ + +G TY T++N L K G + A L E
Sbjct: 126 VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQE 185
Query: 229 MEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
MEK V ++ Y+ I G L ++ + G+ D ++YN L+ C
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
E ++ + P+ TF I LC G +A V + PD T
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305
Query: 348 LVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
L+EG ++ + EA+ + R +K+ P+VL
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVL 336
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 3/216 (1%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F++M + G ++++N L+ ++ + D+ +LF E+ K NL PD SY L+ C
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLC 521
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+ G ELL+EM + G +TY +L+ K ++A L+ ++ +G+ D
Sbjct: 522 NLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFY 580
Query: 240 AYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+ + N G+ ++ E + + G P+ +Y L+ CK+ EA + +
Sbjct: 581 TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKM 640
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
E+N P+A TF I L DKA K+ +E +
Sbjct: 641 EDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 40/168 (23%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI- 158
LCNL G H D+M + G VI++N LL A +++ +DK LF +I
Sbjct: 520 LCNL-------GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 159 ----PKKY-------NL---------------------SPDKISYGLLLKSHCDSGSSDK 186
P Y NL SP+ +Y +L+ + C GS +
Sbjct: 573 EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
A+ LL++ME+ +T+ ++ L ++ ++AE+L EM +G+
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 8/211 (3%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
EP + N LI Y + M D A+ F +M + S+N+L+ C R+ V
Sbjct: 472 EPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI-PHVQ 530
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L DE+ SPD I+Y +LL + C + DKA+ L ++ +G+ T +++
Sbjct: 531 ELLDEMCDS-GQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDN 588
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
L K + AE + G +V Y + I G L+ +M D PD
Sbjct: 589 LCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I++ ++ + D+A+K+ E + G
Sbjct: 649 AITFEIIIGVLLQRNETDKAEKLREEMIARG 679
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 141/293 (48%), Gaps = 8/293 (2%)
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
SHK D ++T L+ + G D + +M+ G V++F L+ A +
Sbjct: 327 SHKPD-RVTY----ITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVG 381
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
D+ D + KK ++P+ +Y L+ D+ALEL N ME+ G+E T TY
Sbjct: 382 KVDEAFGTLD-VMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTY 440
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
++ K G + +A + + +M+ G+ ++ A N + + G E KE + ++
Sbjct: 441 ILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKK 500
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
GL PD I+YN LM CY K +D+A K+ +EENGC P + I L + D+
Sbjct: 501 CGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDE 560
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
A+K+F+ + P T L+ GL K+ +++EA + + I PPN +
Sbjct: 561 AWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTI 613
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 10/284 (3%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +C L+R D A+ F+ M+ LG + ++ + +S K
Sbjct: 404 TYNTLICGLLR----LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKT 459
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+++ K + P+ ++ L S + G ++A E N ++ G+ +TY ++ C
Sbjct: 460 FEKM-KTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYG 518
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPD 271
K G ++A +L SEME+ G D +V N I Y D R+ E + M++ L P
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKAD--RVDEAWKMFQRMKEMKLAPT 576
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L+ K + EA +++G+ + C PN +F T + LC +G D A K+
Sbjct: 577 VVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLF 636
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
++ PD T ++ GL+K+ ++ A + +KK P+
Sbjct: 637 RMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPD 680
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ Y +L+ G + A EL M +G+ +Y+ +++CL G ++
Sbjct: 922 YGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDD 981
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A + E++ G+D D+ YN+ I G +R++E L DEMR+ G+ PD +YN L
Sbjct: 982 ALHYFEELKLSGLDPDLVCYNLMINGL--GRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ M++EA K+YE L+ G PN T+ I SGN D+AY V+K+ ++
Sbjct: 1040 ILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099
Query: 339 IPDFNT 344
P+ T
Sbjct: 1100 RPNTGT 1105
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 5/279 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +A + + A F +M G V ++N L A +S ++ L++E+ +
Sbjct: 793 SLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFR 852
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ I++ +++ S S DKA++L ++ + T TY +++ L K G EE
Sbjct: 853 -GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A++ + EM G + YN+ + N +G GD E EL M G++PD SY+ ++
Sbjct: 912 AKQFFEEMLDYGCMPNCPLYNI-LMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMV 970
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C C +D+A +E L+ +G P+ + I L S ++A +F E
Sbjct: 971 DCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGIT 1030
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
PD T L+ L ++EA + ++ K PNV
Sbjct: 1031 PDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVF 1069
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 120/250 (48%), Gaps = 2/250 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+ + G++G +++M G + I+ N ++F +S DK L+ ++
Sbjct: 829 FLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG- 887
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ SP +YG L+ G ++A + EM + G Y ++N KQG+ E A
Sbjct: 888 DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETA 947
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ M K+G+ D+ +Y++ + G + +E++ +GL PD + YN ++
Sbjct: 948 CELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMING 1007
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+++ ++EA +++ + G +P+ T+ I +L +G ++A K+++E + P+
Sbjct: 1008 LGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPN 1067
Query: 342 FNTVKLLVEG 351
T L+ G
Sbjct: 1068 VFTYNALIRG 1077
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 2/209 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A + F++M + G + +N L+ + + LF + K+
Sbjct: 899 LIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKE- 957
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +++ C G D AL E++ G++ V Y ++N L + EEA
Sbjct: 958 GIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEA 1017
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ EM +G+ D+ YN I N G E ++ +E++ GL+P+ +YN L+
Sbjct: 1018 LSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRG 1077
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ + D A VY+ + GC PN TF
Sbjct: 1078 HSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 122/269 (45%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G+ + M +M+ LG ++ +F + R+ D+ + +
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDA- 291
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y +L+ + C++G + A EL +M+ + VTY T+L+ G+ +
Sbjct: 292 GCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAI 351
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ WSEME G DV + + I G + +D M+ G+ P+ +YN L+
Sbjct: 352 KEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICG 411
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +DEA +++ +E G A T+ +I + SG KA K F++ +P+
Sbjct: 412 LLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPN 471
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ L ++ +++EAK +KK
Sbjct: 472 IVACNASLYSLAEQGRLEEAKEFFNGLKK 500
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 146/340 (42%), Gaps = 5/340 (1%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIET 83
S++S + L+S DP++A ++SV++ + + + + L +R D+
Sbjct: 85 STMSSEEVYRVLKSISDPNQAFSFFNSVAEM-PRVIHTTETCNYVLEMLRAHRRVEDMVV 143
Query: 84 LIE-SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC 142
+ K K + YL Y + G+ A ++M ++G + S+ L+
Sbjct: 144 VFNLMQKQIIKRSINTYLTIFKVLYIRGGL-REAPVALEKMRKVGFVLNGYSYIGLIHLL 202
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
+S + ++ + + + P +Y L+ + + + LL EME+ G+
Sbjct: 203 LKSGFCREALKVYRRMVSE-GIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPN 261
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELID 261
T+T + L + G +EA + M+ G DV Y V I G KEL
Sbjct: 262 IYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFL 321
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M+ + KPD ++Y L+ + + +D K+ + +E +G P+ TF I LC G
Sbjct: 322 KMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVG 381
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
D+A+ P+ +T L+ GL++ ++ EA
Sbjct: 382 KVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
TP S+ ++N+L+ ++RL + LF ++ K +PD +Y L L + SG +
Sbjct: 785 TP-SLEAYNSLIDGLLKARLTEMAWGLFYKM-KNAGCTPDVFTYNLFLDALGKSGKIKEL 842
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+L EM +G + T+T+ V+ L K + ++A L+ ++ Y I
Sbjct: 843 FDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDG 902
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E K+ +EM D G P+ YN LM + K ++ A +++ + + G P+
Sbjct: 903 LLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPD 962
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
++ + LC G D A F+E + PD L++ GL + ++++EA +
Sbjct: 963 LKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFD 1022
Query: 367 TIKKK 371
++ +
Sbjct: 1023 EMRNR 1027
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 130/289 (44%), Gaps = 6/289 (2%)
Query: 92 PKITQEPYLCNLIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
P++ CN + +A + + F+ M + RS+ ++ + +
Sbjct: 116 PRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLRE 175
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
P+ +++ +K + SY L+ SG +AL++ M ++G++ + TY+ ++
Sbjct: 176 APVALEKM-RKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALM 234
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV--RITNTYGGDPERLKELIDEMRDAGL 268
L K+ + E L EME G+ ++ + + RI G + ++ M DAG
Sbjct: 235 VALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGR-AGKIDEAYGILKRMDDAGC 293
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PD ++Y L+ C ++ AK+++ ++ + P+ T+ T + G+ D +
Sbjct: 294 GPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKE 353
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
+ E +PD T +L++ L K K+ EA G + +KK+ PN+
Sbjct: 354 FWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNL 402
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 140/362 (38%), Gaps = 48/362 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A ++ + + +P Y L L K R + L + D
Sbjct: 559 DEAWKMFQRMKEMKLAPTVVTYNTLLA--GLGKEGRVQEATALFKGMIADDCPPNTISFN 616
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ + G D A++ +M E+ V+++N +++ + + LF ++ K
Sbjct: 617 TLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV 676
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---------------GVEV----- 201
+ PD ++ LL G + A + E + G+ +
Sbjct: 677 --IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIG 734
Query: 202 TTVTYTTVLNC----------------LYKQGNAEEAERLWSEMEKK-GVDLDVAAYNVR 244
++ + L C L K G A +A ++ ++ K + + AYN
Sbjct: 735 QSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSL 794
Query: 245 ITNTYGGDPERLKE----LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
I G RL E L +M++AG PD +YN + K+ + E +YE +
Sbjct: 795 ID---GLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLF 851
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
GC PN T I+ L S + DKA ++ + + P T L++GL+K +++E
Sbjct: 852 RGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911
Query: 361 AK 362
AK
Sbjct: 912 AK 913
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G++ + A+ FD+M G + ++NAL+ + + ++ +++E+ K
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK- 1062
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
L P+ +Y L++ H SG+ D+A + +M G T T+ + N
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 166/347 (47%), Gaps = 5/347 (1%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
IS A + ++ E DP AL+I++ V + + + +LA++K+F ++ L+
Sbjct: 48 ISHETAVNLIKHERDPQHALEIFNLVVEQKGFN-HNHATYSTIIDKLARAKKFQAVDALL 106
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFACTR 144
+ E NL++ + ++ F+ + F+++ + + S+ + + L
Sbjct: 107 RQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVE 166
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV-TT 203
S+ D + ++ K + L P+ + + +K HC SG + A ++ EM+ +
Sbjct: 167 SKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNL 226
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITN-TYGGDPERLKELID 261
+TY+T+++ L + G +EA L+ EM K L D YNV I + G +R K++++
Sbjct: 227 ITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIME 286
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M+ G P+ +Y+ LM+ +CK ++EA +E ++ G + + I + C G
Sbjct: 287 FMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFG 346
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D+A + +E D TV +L+ G + + +EA G++ +
Sbjct: 347 RIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRL 393
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 5/264 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L +S R + L E + +I + N LI + G D A + + M G
Sbjct: 236 LCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSP 295
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+V +++AL+ C RL + + F+E+ K + L D + Y +L+ C G D+A+
Sbjct: 296 NVFNYSALMSGFCKEGRLEEAMDA-FEEM-KIFGLKQDTVGYTILINYFCRFGRIDEAMA 353
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
LL EM+ + VT +L +G EEA + + + +G+ L+ A+Y + + +
Sbjct: 354 LLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLC 413
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
GD ++ EL+ G P + N L+ CK M D+A GL E G P
Sbjct: 414 QKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQD 473
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKE 332
++ + +C A+++ E
Sbjct: 474 SWALLVEFVCRERKLLLAFELLDE 497
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 4/203 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
L+ + + G + AM F++M G + + + L+ + C R+ D+ L +E+ K+
Sbjct: 303 LMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRI-DEAMALLEEM-KE 360
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
D ++ +LL+ C G +++AL +LN + ++G+ + +Y VLN L ++G+ ++
Sbjct: 361 TKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDK 420
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +G A N + + G + + + + G KP+ S+ L+
Sbjct: 421 ALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVE 480
Query: 281 CYCKNEMMDEAKKVYEGLEENGC 303
C+ + A ++ + L N C
Sbjct: 481 FVCRERKLLLAFELLDELTANEC 503
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 173/364 (47%), Gaps = 9/364 (2%)
Query: 5 RHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
R + + A A G + +S + A L D+ALD++ + + P +Y+
Sbjct: 328 RSVSEIWNALKADGYNDNV--VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP--QQYS 383
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY-GQAGMFDHAMRTFDQM 123
+ + K+ RF+ L +H N T Y L +Y G++G A++ ++ M
Sbjct: 384 YNSLISGFLKADRFNRALELF-NHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELM 442
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
G V++ NA+L+ ++ +F E+ K +SPD I+Y +++K + +
Sbjct: 443 KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL-KAMGISPDNITYTMMIKCCSKASN 501
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+D+A+++ EM + ++++ LYK G EA +++ E+++ ++ YN
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 244 RITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ G + + +L++ M P+ I+YN ++ C CKN ++ A + + NG
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C P+ +++ T +Y L G D+A+ +F + V PD+ TV ++ V+ +KEA
Sbjct: 622 CMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLA-PDYATVCTILPSFVRSGLMKEAL 680
Query: 363 GVIR 366
+R
Sbjct: 681 HTVR 684
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 3/280 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+L +IR + + A + + LG S+NAL+ L D LF E+
Sbjct: 733 FLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEM 792
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ PD+ +Y L+L + S + L++ EM NKG + T VTY T+++ L K
Sbjct: 793 -KRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKM 851
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
+EA L+ ++ +G Y + G+ E + L DEM + G +P+ YN
Sbjct: 852 LDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNI 911
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ Y ++ +++E + E G +P+ ++ I LC G + FK+ +
Sbjct: 912 LLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG 971
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T LL+ GL K +++EA + ++KK PN+
Sbjct: 972 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNL 1011
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 149/315 (47%), Gaps = 11/315 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHK-NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ L + R +D + + K +D K + Y+ L+ G +G ++ + G
Sbjct: 283 IQILCDAGRLADAKDVFWKMKASDQKPDRVTYI-TLLDKCGDSGDSRSVSEIWNALKADG 341
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+V+S+ A + A + D+ +FDE+ +K + P + SY L+ + ++A
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQQYSYNSLISGFLKADRFNRA 400
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LEL N M G T+ +N K G + +A + + M+ KG+ DV A N +
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVL-- 458
Query: 248 TYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
YG G K + E++ G+ PD I+Y ++ C K DEA K++ + EN C
Sbjct: 459 -YGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+P+ + I L +G ++A+K+F E ++ P T L+ GL ++ K+KE
Sbjct: 518 APDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQ 577
Query: 364 VIRTIK-KKFPPNVL 377
++ + FPPN++
Sbjct: 578 LLEGMNSNSFPPNII 592
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 135/303 (44%), Gaps = 37/303 (12%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
Q G D A+ FD+M + G S+N+L+ ++ +++ LF+ + + +P+
Sbjct: 358 QVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM-NIHGPTPNG 416
Query: 169 ISYGLLLKSHCDSGSSDKALE-----------------------------------LLNE 193
++ L + H SG S KAL+ + +E
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHE 476
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGD 252
++ G+ +TYT ++ C K NA+EA ++++EM + DV A N I Y G
Sbjct: 477 LKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
++ E+++ L+P +YN L+ + + E ++ EG+ N PN T+ T
Sbjct: 537 GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNT 596
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
+ LC +G + A + M +PD ++ ++ GLVK+ ++ EA + +KK
Sbjct: 597 VLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVL 656
Query: 373 PPN 375
P+
Sbjct: 657 APD 659
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T P L L++ G + A FD+M E G + +N LL + +KV L
Sbjct: 873 TYGPLLDGLLKD----GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+ + ++ ++PD SY +++ + C G + L ++ + G+E +TY +++ L
Sbjct: 929 FESMVEQ-GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLG 987
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPD 271
K G EEA L+++MEKKG+ ++ YN I Y G + E + +E+ G KP+
Sbjct: 988 KSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL--YLGKAGKAAEAGKMYEELLAKGWKPN 1045
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+YN L+ Y + + A Y + GC PN++T+
Sbjct: 1046 VFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 139/325 (42%), Gaps = 7/325 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP++AL+++ SV++ V + + + + + R D+ + + +
Sbjct: 80 DPEEALELFLSVARQ-PRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT 138
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
C + + G G A M E G + ++N L++ +S +D+ + +
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSG-FDREAMDVYKAM 197
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ P +Y +L+ + ++ + LL EME +GV +YT + L + G
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYN 276
EEA R+ +ME++G DV V I D RL K++ +M+ + KPD ++Y
Sbjct: 258 EEAYRILRKMEEEGCKPDVVTNTVLIQILC--DAGRLADAKDVFWKMKASDQKPDRVTYI 315
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ + +++ L+ +G + N ++ + LC G D+A VF E
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
IP + L+ G +K + A
Sbjct: 376 GIIPQQYSYNSLISGFLKADRFNRA 400
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 8/306 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +++S + + P + L + + KS R D+ + E N +
Sbjct: 783 DIAEELFSEMKRLGCDP--DEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYN 840
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I ++ M D A+ + Q+ G + ++ LL + + LFDE+ +
Sbjct: 841 TIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM-LE 899
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ Y +LL + +G ++K EL M +G+ +YT V++ L G +
Sbjct: 900 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
+ ++ G++ D+ YN+ I G RL+E L ++M G+ P+ +YN L
Sbjct: 960 GLSYFKQLTDMGLEPDLITYNLLIHGL--GKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ K EA K+YE L G PN T+ I SG+ + A+ + ++
Sbjct: 1018 ILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGC 1077
Query: 339 IPDFNT 344
P+ +T
Sbjct: 1078 RPNSST 1083
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 18/316 (5%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY--LC 101
ALD+ S++ + P S Y + + L K R + + K K+ Y +C
Sbjct: 610 ALDMLYSMTMNGCMPDLSSY--NTVMYGLVKEGRLDEAFWMFCQMK---KVLAPDYATVC 664
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVI---SFNALLFACTRSRLYDKVPILFDEI 158
++ S+ ++G+ A+ T + + P S + S ++L+ + +K I F E
Sbjct: 665 TILPSFVRSGLMKEALHTVREY--ILQPDSKVDRSSVHSLMEGILKRDGTEK-SIEFAEN 721
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
L D + +++ C + A EL+ + EN GV + T +Y ++ L +
Sbjct: 722 IASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDL 781
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISY 275
+ AE L+SEM++ G D D Y++ + G R+++++ +EM + G K ++Y
Sbjct: 782 IDIAEELFSEMKRLGCDPDEFTYHLILDAM--GKSMRIEDMLKIQEEMHNKGYKSTYVTY 839
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N +++ K++M+DEA +Y L G SP T+ + L GN + A +F E +
Sbjct: 840 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Query: 336 VHKIPDFNTVKLLVEG 351
P+ +L+ G
Sbjct: 900 CGCEPNCAIYNILLNG 915
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 110/260 (42%), Gaps = 17/260 (6%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD 80
T ++I KSK+ D+A+++Y + SP Y L L K D
Sbjct: 837 VTYNTIISGLVKSKML-----DEAINLYYQLMSEGFSPTPCTYGPLLD--GLLKDGNIED 889
Query: 81 IETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
E L + +P L N Y AG + F+ M E G + S+
Sbjct: 890 AEALFDEMLECGCEPNCAIYNILLN---GYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 138 LL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
++ C RL D + F ++ L PD I+Y LL+ SG ++AL L N+ME
Sbjct: 947 VIDTLCADGRLNDGLS-YFKQL-TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPER 255
KG+ TY +++ L K G A EA +++ E+ KG +V YN I + G PE
Sbjct: 1005 KGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPEN 1064
Query: 256 LKELIDEMRDAGLKPDTISY 275
M G +P++ +Y
Sbjct: 1065 AFAAYGRMIVGGCRPNSSTY 1084
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 6/198 (3%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+++H G + +L M+ + ++ T+ TV + +G A M++ G
Sbjct: 110 LMRAHGRVGDVAQVFDL---MQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 234 VDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ L+ YN + G D E + ++ M G+ P +Y+ LM + K +
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAM-DVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ +E G PN ++ I L +G ++AY++ ++ PD T +L++
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285
Query: 352 LVKKKKIKEAKGVIRTIK 369
L ++ +AK V +K
Sbjct: 286 LCDAGRLADAKDVFWKMK 303
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 121/295 (41%), Gaps = 37/295 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +AG + A + F ++ E+ + ++N LL R +V L + +
Sbjct: 526 SLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN 585
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ I+Y +L C +G + AL++L M G +Y TV+ L K+G +E
Sbjct: 586 -SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDE 644
Query: 222 AERLWSEMEK-----------------KGVDLDVAAYNVR--------------ITNTYG 250
A ++ +M+K + + A + VR + +
Sbjct: 645 AFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLME 704
Query: 251 G-----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E+ E + + +GL D + + ++ +CK++ A ++ + E G S
Sbjct: 705 GILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSL 764
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
++ I L D A ++F E + PD T L+++ + K +I++
Sbjct: 765 KTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 819
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 77/179 (43%), Gaps = 9/179 (5%)
Query: 36 RSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKIT 95
R D +K +++ S+ + +P Y + + L R +D + K +
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYT--VVIDTLCADGRLNDG---LSYFKQLTDMG 971
Query: 96 QEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
EP L LI G++G + A+ ++ M++ G ++ ++N+L+ ++ +
Sbjct: 972 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAG 1031
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+++E+ K P+ +Y L++ + SGS + A M G + TY + N
Sbjct: 1032 KMYEELLAK-GWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 2/266 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ +F+ M +I F LL A + Y V I + + LSP+ + +
Sbjct: 74 DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
+ C D +L ++ G++ T VT+TT++N L K G +A L+ +M KG
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
DV YN I G+ L+ +M +AG +P+ ++Y+ L+ C++ +++EA
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ ++ G SP+ T+ + I LC + +A + E ++ +PD T +LV+
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVL 377
K+ K+ EA GV++T+ + PNV+
Sbjct: 314 CKEGKVSEALGVLKTMTEMGVEPNVV 339
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 16/283 (5%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC + + AG+ +M+E G ++++++ L+ + R RL ++ +F +
Sbjct: 208 LCKIGETAAAAGLLK-------KMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMK 260
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K +SPD +Y L++ C +A LLNEM + + VT+ +++ K+G
Sbjct: 261 AK-GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISY 275
EA + M + GV+ +V Y+ + YG D ++L M G KP+ SY
Sbjct: 320 SEALGVLKTMTEMGVEPNVVTYS---SLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSY 376
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ YCK + +DEA +++ + G +PN ++ T I+ C G +A +F+
Sbjct: 377 NILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCT 436
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
+PD T +L++G K+ + +A + R ++ + PN++
Sbjct: 437 NGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLV 479
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 127/263 (48%), Gaps = 6/263 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S + + + A+ F M G + ++ +L+ + + + L +E+
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEM-TSL 297
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ PD +++ +L+ + C G +AL +L M GVE VTY++++ + EA
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
+L+ M KG ++ +YN+ I N Y +R+ E L +EM GL P+ +SYN L+
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILI-NGYC-KAKRIDEAMQLFNEMIHQGLTPNNVSYNTLI 415
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+ + EA+ ++ + NG P+ T+ + C G KA+++F+ +
Sbjct: 416 HGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLK 475
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
P+ +LV + K K+A+
Sbjct: 476 PNLVMYTILVHAMCKSGNHKDAR 498
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 146/319 (45%), Gaps = 10/319 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALDI+S + SP Y ++ L K R+ + L+ + +
Sbjct: 250 NEALDIFSYMKAKGISPDIFTYTS--LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ ++ + G A+ M E+G +V+++++L++ + + LF + K
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ SY +L+ +C + D+A++L NEM ++G+ V+Y T+++ + G E
Sbjct: 368 -GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLRE 426
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
A+ L+ M G D+ Y++ + Y G RL M+ LKP+ + Y
Sbjct: 427 AQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL---FRAMQSTYLKPNLVMYTI 483
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK+ +A+K++ L G P+ + T I LC G D+A + F+
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543
Query: 338 KIPDFNTVKLLVEGLVKKK 356
PD + +++ GL++ K
Sbjct: 544 CPPDEISYNVIIRGLLQHK 562
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
++ ++ + K+KR + L + LI + Q G A F
Sbjct: 374 FSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRN 433
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G + +++ LL + K LF + Y L P+ + Y +L+ + C SG
Sbjct: 434 MCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY-LKPNLVMYTILVHAMCKSG 492
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ A +L +E+ +G++ YTT++N L K+G +EA + ME G D +YN
Sbjct: 493 NHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYN 552
Query: 243 VRITNTYGG-DPERLKELIDEMRDAGLKPDT 272
V I D R L+ EMRD G D
Sbjct: 553 VIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 148/335 (44%), Gaps = 37/335 (11%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + L K+ + E L+ + +I + + G A + FD+
Sbjct: 313 YIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDE 372
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M ++++ +++ +S + +F+E+ K L PD+++Y L+ +C +G
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK-GLEPDEVTYTALIDGYCKAG 431
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+A + N+M KG+ VTYT + + L K G + A L EM +KG+ +V YN
Sbjct: 432 EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYN 491
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK----------------- 284
+ G+ E+ +L++EM AG PDTI+Y LM YCK
Sbjct: 492 TIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK 551
Query: 285 ------------------NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ M+++ +++ E + E G PNATTF + + C N
Sbjct: 552 RLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT 611
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+++K +PD NT +L++G K + +KEA
Sbjct: 612 TEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEA 646
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG A +QM + G +V+++ AL ++ D L E+ +K
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK- 481
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y ++ C G+ ++ ++L+ EM+ G T+TYTT+++ K G +A
Sbjct: 482 GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKA 541
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M K + + +NV + G E + LI+ M + G+ P+ ++N LM
Sbjct: 542 HELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQ 601
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M ++Y+ + + G P++ T+ I C + N +A+ + KE V
Sbjct: 602 YCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVT 661
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T L+ G K+KK EA+ + ++K
Sbjct: 662 AATYDALIRGFYKRKKFVEARKLFEEMRK 690
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 127/272 (46%), Gaps = 5/272 (1%)
Query: 109 QAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+ G D ++ D++ G P I N +L C + + +L +K+ + PD
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGM--RKWGVFPD 346
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+ Y ++ C G+ A +L +EM K + VTYT+V++ + K G EA +++
Sbjct: 347 NVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 228 EMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
EM KG++ D Y I G+ + + ++M GL P+ ++Y L CKN
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+D A ++ + G PN T+ T + LC GN ++ K+ +E + PD T
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 347 LLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
L++ K ++ +A ++R + K+ P ++
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLV 558
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 101 CNLI-RSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEI 158
CN++ Q G A QM + G P V + C L DKV L DE+
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGEL-DKVLKLVDEL 303
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K L PD+ Y ++ C +G +A +LL M GV V YTTV++ K GN
Sbjct: 304 KGK-GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
A +L+ EM +K + D+ Y I G +E+ +EM GL+PD ++Y
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTA 422
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ YCK M EA V+ + + G +PN T+ LC +G D A ++ E
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482
Query: 338 KIPDFNTVKLLVEGLVKKKKIKE 360
P+ T +V GL K I++
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQ 505
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A++ F++ ELG + +S N +L + + L ++ + N PD +SYG+++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNF-PDVVSYGVVV 284
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+C G DK L+L++E++ KG++ Y ++ L K G EAE+L M K GV
Sbjct: 285 SGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344
Query: 236 LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D Y I+ G+ +L DEMR + PD ++Y ++ CK+ M EA+++
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + G P+ T+ I C +G +A+ V + V P+ T L +GL K
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 355 KKKIKEAKGVIRTIKKK-FPPNV 376
+I A ++ + +K PNV
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNV 487
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 7/226 (3%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LFDE+ +K + PD ++Y ++ C SG +A E+ NEM KG+E VTYT +++
Sbjct: 369 LFDEMRRK-KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGY 427
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDT 272
K G +EA + ++M +KG+ +V Y G+ + EL+ EM GL+P+
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN ++ CK +++ K+ E ++ G P+ T+ T + C G KA+++ +
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLR- 546
Query: 333 SVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+M++K P T +L+ G +++ + +I ++K PN
Sbjct: 547 -IMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L + C+ A+++ E GV TV+ VL+CL + G EA L +M +
Sbjct: 212 FLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDR 271
Query: 233 GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G DV +Y V ++ G+ +++ +L+DE++ GLKPD YN ++ CKN + EA
Sbjct: 272 GNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEA 331
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+++ G+ + G P+ + T I C GN A K+F E +PD T ++ G
Sbjct: 332 EQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHG 391
Query: 352 LVKKKKIKEAK 362
+ K K+ EA+
Sbjct: 392 ICKSGKMVEAR 402
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + +GM + R + M E G + +FN+L+ C ++ + I +
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIY--KAMHD 620
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y +L+K HC + + +A L EM KG VT TY ++ YK+ E
Sbjct: 621 RGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVE 680
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM 263
A +L+ EM K G+ + Y++ + Y G+ E EL DE
Sbjct: 681 ARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEF 723
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 140/276 (50%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + +A DHA + D+M + G V+++N L+ C R RL D + D++ K
Sbjct: 152 VISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRL-DLALRVMDQLLKD 210
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N P I+Y +L+++ G D+A++LL+EM ++G+ TY V+N + K+G +
Sbjct: 211 -NCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDR 269
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A S + K G V+ YN+ + + G E ++L+ +M G +P+ I+Y+ L+T
Sbjct: 270 AFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLIT 329
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C++ +DEAK V + ++E +P+ ++ I LC G D A + + + +P
Sbjct: 330 ALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP 389
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
D + ++ L K EA + + + PPN
Sbjct: 390 DILSYNSILASLCKNGNADEALNIFEKLGEVGCPPN 425
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 150/359 (41%), Gaps = 46/359 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA+ + + KH V +A + + K+ R +++ K K EP +
Sbjct: 129 EKAIQVMEILEKHGKPDV---FAYNAVISGFCKADRVDHASKVLDRMK---KRGFEPDVV 182
Query: 102 N---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LI ++ G D A+R DQ+ + +VI++ L+ A D+ L DE+
Sbjct: 183 TYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEM 242
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ L PD+ +Y +++ C G D+A E L+ + G TY +L L +G
Sbjct: 243 LSR-GLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGK 301
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRIT-------------------------NTYGGDP 253
E E+L S+M KG + + Y+ IT + Y DP
Sbjct: 302 WEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDP 361
Query: 254 -----------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ E +D+M G PD +SYN ++ CKN DEA ++E L E G
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
C PNA ++ T L SG+ +A + E + PD T L+ L + + +A
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQA 480
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 3/252 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R G +++ + M G + I+++ L+ A R D+ + ++ K+
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVL-KVMKEK 350
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD SY L+ + C G D A+E L++M + G ++Y ++L L K GNA+EA
Sbjct: 351 ALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEA 410
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ ++ + G + +YN + GD R +I EM G+ PD I+YN L++C
Sbjct: 411 LNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISC 470
Query: 282 YCKNEMMDEAKKVY-EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C++ ++D+A ++ + E C P ++ T + LC A +V V +P
Sbjct: 471 LCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLP 530
Query: 341 DFNTVKLLVEGL 352
+ T LL++G+
Sbjct: 531 NETTYTLLIQGI 542
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 6/300 (2%)
Query: 74 KSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVI 133
+ ++F ET H D ++ L RS A +D ++ M G VI
Sbjct: 55 EQQQFRVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAK-YDESLYFLQHMVNRGYKPDVI 113
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
L+ + +K I EI +K+ PD +Y ++ C + D A ++L+
Sbjct: 114 LCTKLIKGFFNMKKIEKA-IQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDR 171
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI--TNTYGG 251
M+ +G E VTY ++ +G + A R+ ++ K V Y + I T T GG
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG 231
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E +K L+DEM GL+PD +YN ++ CK M+D A + + +NGC +T+
Sbjct: 232 IDEAMK-LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYN 290
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ L G ++ K+ + ++ P+ T L+ L + KI EAK V++ +K+K
Sbjct: 291 ILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEK 350
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 104/244 (42%), Gaps = 41/244 (16%)
Query: 85 IESHKNDPKITQEPYLCN-------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
I+ KN K+ +E L LI + + G D A+ D M G ++S+N+
Sbjct: 337 IDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNS 396
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+L + ++ D+ +F+++ + P+ SY L + SG +AL ++ EM +
Sbjct: 397 ILASLCKNGNADEALNIFEKL-GEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSN 455
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK 257
G++ +TY ++++CL + G ++A L
Sbjct: 456 GIDPDEITYNSLISCLCRDGLVDQAIEL-------------------------------- 483
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L+D +P ISYN ++ CK + + +A +V + GC PN TT+ I +
Sbjct: 484 -LVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Query: 318 CGSG 321
+G
Sbjct: 543 GFAG 546
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 172/384 (44%), Gaps = 43/384 (11%)
Query: 33 SKLRSEF--DPDKALDIYSSVSK--HYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
++L S+F + D ++ SS ++ H +P S + + L KS +S + +L
Sbjct: 39 TRLYSQFHENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQM 98
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRL 147
+ + + L LI + Q G + ++ ++G +VI+ L+ C + ++
Sbjct: 99 EFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQI 158
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ + + ++L +K+SYG L+ C G + AL+LL ++ K V+ V Y
Sbjct: 159 HQALQFHDKVVALGFHL--NKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYN 216
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--------------------- 246
T+++ + K EA L+SEM KG+ DV YN I+
Sbjct: 217 TIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFE 276
Query: 247 ----NTYGGD--------PERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
N Y + RLKE ++ M G+KPD +YN LM YC + +++A
Sbjct: 277 NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKA 336
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K ++ + + G +PN ++ I+ C D+A +FKE + IPD T L++G
Sbjct: 337 KHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDG 396
Query: 352 LVKKKKIKEAKGVIRTIKKKFPPN 375
L K KI A ++ + + P+
Sbjct: 397 LCKLGKISYALKLVDEMHDRGVPH 420
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G A F++M +V +FN L+ C RL + +L + K
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL--AMMMK 310
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y L+ +C +KA + N + +GV +Y+ +++ K +E
Sbjct: 311 QGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDE 370
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM + DV YN I G +L+DEM D G+ D I+YN ++
Sbjct: 371 AMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILD 430
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN +D+A + +++ G P+ T+ T + LC +G + A VF++ ++ I
Sbjct: 431 ALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYIL 490
Query: 341 DFNTVKLLVEGL 352
D N +++G
Sbjct: 491 DVNIYTAMIQGF 502
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 2/220 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F+ + + G ++ S++ ++ + + D+ LF E+ N+ PD ++Y L+
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCN-NIIPDVVTYNSLI 394
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G AL+L++EM ++GV +TY ++L+ L K ++A L ++M+ +G+
Sbjct: 395 DGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 454
Query: 236 LDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D+ Y + G E + + +++ G D Y ++ +C + + DE+ +
Sbjct: 455 PDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDL 514
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+EENGC PNA T+ I L DKA K+ +E +
Sbjct: 515 LSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMI 554
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 13/346 (3%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSS-VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE 82
++I S K KL +E A D+YS VSK + V + A + K K +D+
Sbjct: 216 NTIIDSMCKVKLVNE-----AFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLF 270
Query: 83 TLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
+ +P + Y N L+ + + A M + G V ++N+L+
Sbjct: 271 NKMIFENINPNV----YTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDR 326
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+ +K +F+ I ++ ++P+ SY +++ C D+A+ L EM +
Sbjct: 327 YCLVKEVNKAKHIFNTISQR-GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP 385
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELI 260
VTY ++++ L K G A +L EM +GV D YN + ++ L+
Sbjct: 386 DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 445
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+M+D G++PD +Y L+ CKN +++A+ V+E L G + + I C
Sbjct: 446 TKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSH 505
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
G FD++ + + IP+ T ++++ L K + +A+ ++R
Sbjct: 506 GLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLR 551
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 137/306 (44%), Gaps = 39/306 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A++ ++D +V+ +N ++ + + +L ++ L+ E+ K
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK- 241
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD ++Y L+ C G A +L N+M + + T+ +++ K+ +EA
Sbjct: 242 GISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEA 301
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLMT 280
+ + + M K+G+ DV YN + + Y E + K + + + G+ P+ SY+ ++
Sbjct: 302 KNVLAMMMKQGIKPDVFTYN-SLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIH 360
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-------- 332
+CK + +DEA +++ + N P+ T+ + I LC G A K+ E
Sbjct: 361 GFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH 420
Query: 333 ------SVM-----VHKI----------------PDFNTVKLLVEGLVKKKKIKEAKGVI 365
S++ H++ PD T LV+GL K ++++A+ V
Sbjct: 421 DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVF 480
Query: 366 RTIKKK 371
+ K
Sbjct: 481 EDLLVK 486
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + D AM F +M V+++N+L+ + L DE+ +
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR- 416
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ DKI+Y +L + C + DKA+ LL +M+++G++ TYTT+++ L K G E+A
Sbjct: 417 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDA 476
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ ++ KG LDV Y I ++G E L +L+ +M + G P+ ++Y ++
Sbjct: 477 RIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL-DLLSKMEENGCIPNAVTYEIIIC 535
Query: 281 CYCKNEMMDEAKKVYEGLEENG 302
+ D+A+K+ + G
Sbjct: 536 SLFDKDENDKAEKLLREMITRG 557
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 106/260 (40%), Gaps = 37/260 (14%)
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+ + + N P +G +L S S + L +ME G+ V + ++NC
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--------------------------- 247
+ G + + +++ K G + +V I
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178
Query: 248 TYG---------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+YG G +L+ + ++P+ + YN ++ CK ++++EA +Y +
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G SP+ T+ I C G A +F + + + P+ T +LV+G K++++
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 359 KEAKGVI-RTIKKKFPPNVL 377
KEAK V+ +K+ P+V
Sbjct: 299 KEAKNVLAMMMKQGIKPDVF 318
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA I++++S+ +P Y+ + + K K+ + L + + I
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYS--IMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G +A++ D+M + G P I++N++L A ++ DK L ++ K
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM-KD 450
Query: 162 YNLSPDKISY-----GL------------------------------LLKSHCDSGSSDK 186
+ PD +Y GL +++ C G D+
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+L+LL++ME G VTY ++ L+ + ++AE+L EM +G+
Sbjct: 511 SLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
>gi|294462101|gb|ADE76603.1| unknown [Picea sitchensis]
Length = 290
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 132/279 (47%), Gaps = 38/279 (13%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
I EP CNLI + +AG A+ F + E R+V+S+NA++ C +L + +
Sbjct: 17 IFSEPVFCNLIGGFFKAGEIYKALDVFHFIPE-KFERTVMSYNAVMDGFCKAGQLQEALQ 75
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L D++P+ NL P+ SY +L+ + G +A +L M KG Y T+L+
Sbjct: 76 YL-DKLPEN-NLGPNATSYTILISGYITQGKLQEAEKLFRSMAEKGCIPDACVYNTLLDA 133
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDT 272
+K+G EAE+L L+E++ E R+ PD+
Sbjct: 134 YFKEGMFAEAEKL------------------------------LEEMVTEHRE----PDS 159
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++Y L+ + K M+ A K++ + E G P+ T + W LC FD+A K+F+
Sbjct: 160 VTYTMLINEFTKQGKMEGALKIFANMIEAGLKPDVTVYNKWFGLLCKESKFDEAQKLFQR 219
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + PD T +L EG ++ + +EAK + R I +K
Sbjct: 220 MVDGGQNPDVGTYDILTEGFGQEGRAEEAKKLFRDILEK 258
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ +Y + GMF A + ++M E P SV ++ L+ T+ + +F + +
Sbjct: 130 LLDAYFKEGMFAEAEKLLEEMVTEHREPDSV-TYTMLINEFTKQGKMEGALKIFANMIEA 188
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD Y C D+A +L M + G TY + ++G AEE
Sbjct: 189 -GLKPDVTVYNKWFGLLCKESKFDEAQKLFQRMVDGGQNPDVGTYDILTEGFGQEGRAEE 247
Query: 222 AERLWSEMEKKG 233
A++L+ ++ +KG
Sbjct: 248 AKKLFRDILEKG 259
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 18/317 (5%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R L +++ ++ +I+ +P P L ++IR G A M A+ F Q+
Sbjct: 126 IRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARK 185
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++N+++ Y+KV L++E+ + PD ++Y L+ + C G D A
Sbjct: 186 CQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSA 245
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ LLNEM++ G++ T YT ++ L+K N A L+ EM + DV Y I
Sbjct: 246 IWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRG 305
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G RL E EMR G +PDT+ N ++ K +D+A K++E +E C
Sbjct: 306 L--GKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCI 363
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI------PDFNTVKLLVEGLVKKKKI 358
P+ T+ T I L F+ +V + S ++ P T +L++G K +
Sbjct: 364 PSVVTYNTIIKAL-----FESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRT 418
Query: 359 KEAKGVIRTIKKK-FPP 374
++A ++ + +K FPP
Sbjct: 419 EKAMMLLEEMDEKGFPP 435
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 14/310 (4%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL ++ + Y P Y + +R L K+ R + + + + N+
Sbjct: 280 ALGLFEEMRHQYCRPDVFTYTE--LIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNM 337
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC--TRSRLYDKVPILFDEIPKK 161
I G+AG D A++ F++M+ L SV+++N ++ A ++SR+ ++ F+ + K
Sbjct: 338 INFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRV-SEISSWFERM-KG 395
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SP +Y +L+ C + ++KA+ LL EM+ KG Y ++++ L K +
Sbjct: 396 SGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 455
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ E+++ Y V I + G RL + L DEM G P+ +YN L
Sbjct: 456 ANELFQELKENCGSSSARVYAVMIKHL--GKAGRLDDAVDLFDEMNRLGCTPNVYAYNAL 513
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M+ + M+DEA ++++GC P+ ++ + L +G D+A + K+S +
Sbjct: 514 MSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAI 573
Query: 336 VHKIPDFNTV 345
+NTV
Sbjct: 574 KPDAVSYNTV 583
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA+ + + + P + Y + L K+KR+ L + K + +
Sbjct: 419 EKAMMLLEEMDEKGFPPCPAAYCS--LIDALGKAKRYDLANELFQELKENCGSSSARVYA 476
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ G+AG D A+ FD+M+ LG +V ++NAL+ R+ + D+ + +
Sbjct: 477 VMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM-QD 535
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD SY ++L + +G D+A+ +L M+ ++ V+Y TVL L G EE
Sbjct: 536 HGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEE 595
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A +L EM G D D+ Y+
Sbjct: 596 AAKLMKEMNAIGFDYDLITYS 616
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 142/365 (38%), Gaps = 41/365 (11%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA+ I+ + P + Y + + L + + L N+ + + +
Sbjct: 173 KAVAIFYQIKARKCQPTAHAYNSMIIM--LMHEGEYEKVHELYNEMSNEGQCFPDTVTYS 230
Query: 103 -LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI ++ + G D A+ ++M + G + + L+ + LF+E+ +
Sbjct: 231 ALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQ 290
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD +Y L++ +G D+A +EM +G TV ++N L K G ++
Sbjct: 291 Y-CRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDD 349
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-------------------GGDP--------- 253
A +L+ EME V YN I + G P
Sbjct: 350 AIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILI 409
Query: 254 ---------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
E+ L++EM + G P +Y L+ K + D A ++++ L+EN S
Sbjct: 410 DGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGS 469
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+A + I HL +G D A +F E + P+ L+ GL + + EA
Sbjct: 470 SSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTT 529
Query: 365 IRTIK 369
+R ++
Sbjct: 530 MRRMQ 534
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + FD+M E G +++++N L+ R ++ + D++ K ++P+ I+Y L+
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLI 345
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G KAL L +++++G+ + VTY +++ ++G+ A ++ EME++G+
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 236 LDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
Y + I T + E+ +L M + GL PD +Y+ L+ +C M+EA ++
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + E C PN + T I C G+ +A K+ KE P+ + + ++E L K
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 355 KKKIKEAKGVI 365
++K KEA+ ++
Sbjct: 526 ERKSKEAERLV 536
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SY Q+ + ++ F++M + G FN LL S +++ F+E K
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKV 159
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D S+G+L+K C++G +K+ +LL E+ G V YTT+++ K+G E+A
Sbjct: 160 VL--DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ EM K G+ + Y V I + G ++ E+ ++M++ G+ P+ +YN +M
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ +A +V++ + E G S N T+ T I LC ++A KV + P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++G K+ +A + R +K +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 141/325 (43%), Gaps = 37/325 (11%)
Query: 88 HKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
++N K+ + Y LI+ +AG + + ++ E G +V+ + L+ C +
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 147 LYDKVPILFDEIPK----------------------------------KYNLSPDKISYG 172
+K LF E+ K + + P+ +Y
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
++ C G + A ++ +EM +GV VTY T++ L ++ EA ++ +M+
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 233 GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G++ ++ YN I G G + L +++ GL P ++YN L++ +C+ A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K+ + +EE G P+ T+ I S N +KA ++ + +PD +T +L+ G
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 352 LVKKKKIKEAKGVIRT-IKKKFPPN 375
K ++ EA + ++ ++K PN
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPN 477
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 4/208 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
+ A + DQM G ++I++N L+ C +L + + D K LSP ++Y
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD--LKSRGLSPSLVTY 376
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L+ C G + A +++ EME +G++ + VTYT +++ + N E+A +L ME+
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
G+ DV Y+V I G L M + +P+ + YN ++ YCK
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLC 318
A K+ + +EE +PN ++R I LC
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 139/277 (50%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G+ +++M E G ++ ++N ++ C R D + FDE+ ++
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV-FDEMRER 297
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + ++Y L+ C ++A +++++M++ G+ +TY T+++ G +
Sbjct: 298 -GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +++ +G+ + YN+ ++ GD +++ EM + G+KP ++Y L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +++ M++A ++ +EE G P+ T+ I+ C G ++A ++FK V + P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
+ ++ G K+ A +++ + +K+ PNV
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ ++ + A++ M+ELG V +++ L+ C + ++ ++ LF + +K
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM-NEASRLFKSMVEK 472
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N P+++ Y ++ +C GSS +AL+LL EME K + +Y ++ L K+ ++E
Sbjct: 473 -NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 222 AERLWSEMEKKGVD 235
AERL +M G+D
Sbjct: 532 AERLVEKMIDSGID 545
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 149/288 (51%), Gaps = 6/288 (2%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
+ ++ L++S + D I + Y N LI + ++ A + FD+M G ++ N
Sbjct: 228 WKEVLALVDSMRKD-GIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLN 286
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+LL ++R YD+ + E+ ++ P ++Y L+ S+ G ++A +L EME
Sbjct: 287 SLLDVYGKARRYDEAIGVLKEM-EQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEV 345
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPE 254
KG+E +TYTT+++ L + G + A ++EM + G ++ YN +++ G PE
Sbjct: 346 KGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPE 405
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ + DE+R AG PD +++N L+ + +N + E V++ ++++G P T+ + I
Sbjct: 406 MMI-VFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLI 464
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
G FD+A +++K + PD +T ++ L + + ++A+
Sbjct: 465 SSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAE 512
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 140/290 (48%), Gaps = 4/290 (1%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
+++ + + K + + +LI SY + G+FD AM + +M E G + ++NA+
Sbjct: 439 TEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAV 498
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R +++ LF E+ + + PD++SY LL ++ ++ DK L ++ +
Sbjct: 499 LSALARGGRWEQAEKLFAEM-ENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAER 557
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERL 256
+E T++ K N + E+ + E+ ++ LD+ N I+ YG G +++
Sbjct: 558 IESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMIS-IYGKNGMVKKV 616
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+E++ M+++ + T +YN LM Y + ++ + + ++ + P+ ++ T IY
Sbjct: 617 EEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYA 676
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
G +A ++F E +PD T + V+ V +EA ++R
Sbjct: 677 YGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVR 726
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
D M + G P ++N L+ C R LY + +FDE+ + PDK++ LL +
Sbjct: 236 DSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEM-RAAGFEPDKVTLNSLLDVYGK 294
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+ D+A+ +L EME G + VTY ++++ K G EEA +L EME K
Sbjct: 295 ARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVK-------- 346
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
G++PD I+Y L++ + +D A Y +
Sbjct: 347 --------------------------GIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLR 380
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NGC PN T+ I G F + VF E +PD T L+ + E
Sbjct: 381 NGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTE 440
Query: 361 AKGVIRTIKK 370
GV + +KK
Sbjct: 441 VSGVFKEMKK 450
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 37/257 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI---- 158
++ + + G ++ A + F +M+ L + +S+++LL A ++ DK+ L ++I
Sbjct: 498 VLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAER 557
Query: 159 ---------------PKKYNLSPDKISYGLLLKSHCD---------------SGSSDKAL 188
K NLS + ++ L + C +G K
Sbjct: 558 IESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVE 617
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
E+L+ M+ + ++T TY ++++ + G+ E+ E + +E++ D +YN I
Sbjct: 618 EILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIY-A 676
Query: 249 YG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
YG G + L EM+ +GL PD ++YN + Y N M +EA + + +GC PN
Sbjct: 677 YGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPN 736
Query: 307 ATTFRTWIYHLCGSGNF 323
T+ T + C G
Sbjct: 737 ERTYNTILQEYCSHGRI 753
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA-EEAER 224
PD +Y L+ + + A+ + M GV VTY VL+ K +E
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 225 LWSEMEKKGVDLDVAAYNVRIT-----NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
L M K G+ LD YN I+ Y + ++ DEMR AG +PD ++ N L+
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALY----KEAAKVFDEMRAAGFEPDKVTLNSLL 289
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K DEA V + +E+ GC P+ T+ + I G ++A + KE + V I
Sbjct: 290 DVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQ-LKEEMEVKGI 348
Query: 340 -PDFNTVKLLVEGLVKKKKIKEAKG 363
PD T LV GL + KI A G
Sbjct: 349 EPDVITYTTLVSGLDRAGKIDAAIG 373
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 168/391 (42%), Gaps = 39/391 (9%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
G+ ++++ + E D +KA D+++ + + SP S Y + V L K++
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTY--NCVVNALCKAR 265
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
E ++ + + +LI Y G + A+R +M G V++ N
Sbjct: 266 AMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLN 325
Query: 137 ALLFA-CTRSRLYDKVPILFDEIPKK----------------------------YNL--- 164
+L+ + C ++ D + FD + K +NL
Sbjct: 326 SLMASLCKHGKIKDARDV-FDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384
Query: 165 ---SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD + +L+K++ G D+A + NEM +GVE VTY+TV+ L + G ++
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +++M +GV ++ Y+ I GD + K+L+ +M + G++PD +NF++
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + +A+ +++ G PN + T + C G + A +VF V P
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ LV G K +I E + R I K
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 133/277 (48%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A F++M + G + ++N ++ A ++R DK + ++ K
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y L+ + +G +A+ + +M ++G+ VT +++ L K G ++A
Sbjct: 282 VL-PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDA 340
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ M KG D+ +Y + + N Y G L EL + M G+ PD+ +N L+
Sbjct: 341 RDVFDSMAMKGQKTDIFSYKIML-NGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIK 399
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K M+D A ++ + E G P+ T+ T I LC G D A + F + + P
Sbjct: 400 AYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAP 459
Query: 341 DFNTVKLLVEGLVKKKKIKEAKG-VIRTIKKKFPPNV 376
+T L++G + +AK V++ + K P++
Sbjct: 460 SISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI 496
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 163/369 (44%), Gaps = 42/369 (11%)
Query: 14 TTAAGSSTT--ASSISVSKAKSKLR-SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR 70
TTAA SS + A ++++ A +++R F P++A D++ + H A+PV R
Sbjct: 13 TTAACSSPSPRAPHLALATATARVRKGTFRPEEAHDLFDEL-LHQATPVPGR-------- 63
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
+L + ++ P + A+ F+++ PR
Sbjct: 64 QLNGFLAALARAPASAACRDGPAL---------------------AVALFNRVSRAHGPR 102
Query: 131 ----SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
++ ++ L+ CTR+ F ++ K L D I LL+ C++ + +
Sbjct: 103 VLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKT-GLGIDTIMISNLLRGLCEAKRTAE 161
Query: 187 ALE-LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNV 243
AL+ LL+ M + G +Y VL L + +A+ L M + G + AYN
Sbjct: 162 ALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNT 221
Query: 244 RITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I + GD + +L +EM G+ PD +YN ++ CK MD+A+ + + + G
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ T+ + IY +G + +A +V K+ +PD T+ L+ L K KIK+A+
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 363 GVIRTIKKK 371
V ++ K
Sbjct: 342 DVFDSMAMK 350
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 127/273 (46%), Gaps = 7/273 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + G A FD +G +V+ +N L+ C ++ + + + ++
Sbjct: 502 IINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVF--DVMVS 559
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ + YG L+ +C G D+ L L E+ +KG++ +T Y +L+ L++ G
Sbjct: 560 AGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVP 619
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ + EM + G+ +D Y++ + + + L E+ +K D + N ++
Sbjct: 620 AKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIA 679
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK--ESVMVHK 338
+ ++EAK ++ + +G P+ T+ + +L G ++A +F E+ +
Sbjct: 680 GMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQ 739
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ + +V L++K++I A + I ++
Sbjct: 740 -PNSQLLNHVVRELLEKREIVRAGTYLSKIDER 771
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 165/355 (46%), Gaps = 23/355 (6%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D +A + + K++ P Y V L K++R D L++ + D + Y
Sbjct: 92 DFGQAFKFLAEMVKNHCLPTVVTYTN--IVDGLCKAERTRDAVKLLDEMR-DKGCSPNIY 148
Query: 100 LCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N+I + D A + ++M G V+++N+ + + D+ +
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 208
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
P ++PD +SY ++ C SG D A +L+ M N+G VTY+++++ K G
Sbjct: 209 P----VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGE 264
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
E A L M K G ++ AYN + + G + ++++ EM G PD +SYN
Sbjct: 265 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 324
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH----------LCGSGNFDKAY 327
+ CK E + +AK V++ + E GC+PNA+++ I LC G FD+A
Sbjct: 325 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEAC 384
Query: 328 KVFKESVMVHKI--PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAW 380
+F + V+ KI PD ++++ K+++I +A + + + +K NV+ W
Sbjct: 385 ALFSK-VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVV-TW 437
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 156/345 (45%), Gaps = 10/345 (2%)
Query: 34 KLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
+L E DKA ++ + P + +A + +R L +S + L+ K
Sbjct: 16 QLTREHRHDKASAVFQEMIDKSCQPDAFTFA--ILLRGLCRSNQLEKARKLLGRMKEMGC 73
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF-NALLFACTRSRLYDKVP 152
+ + LI Y +A F A + +M + +V+++ N + C R D V
Sbjct: 74 VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVK 133
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+L DE+ K SP+ +Y ++++ C+ D+A ++L EM +G VTY + +
Sbjct: 134 LL-DEMRDK-GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKG 191
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L K +EA + + M V DV +Y I GD + ++D M + G PD
Sbjct: 192 LCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPD 248
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++Y+ L+ +CK ++ A + + + + GC PN + + + L G+ KA +
Sbjct: 249 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 308
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
E PD + ++GL K +++K+AK V R +++ PN
Sbjct: 309 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPN 353
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 46/284 (16%)
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
+G +V ++N LL TR +DK +F E+ K + PD ++ +LL+ C S +
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDK-SCQPDAFTFAILLRGLCRSNQLE 59
Query: 186 KALELLNEMENKGV----------------------------EV-------TTVTYTTVL 210
KA +LL M+ G E+ T VTYT ++
Sbjct: 60 KARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIV 119
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER----LKELIDEMRDA 266
+ L K +A +L EM KG ++ YNV + G ER K++++EM
Sbjct: 120 DGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVE---GLCEERKLDEAKKMLEEMAVR 176
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G PD ++YN + CK + +DEA+K L +P+ ++ T I LC SG+ D A
Sbjct: 177 GYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSA 233
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
++ PD T L++G K +++ A G++ ++ K
Sbjct: 234 SRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 277
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 47/293 (16%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + G + AM D M +LG +++++N+LL A R K + E+ ++
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 313
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE----------VTTVTYTTVLN 211
+PD +SY + C + KA + + M +G V + YT +L+
Sbjct: 314 -GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372
Query: 212 CLYKQGNAEEAERLWSE-MEKKGVDLDVAAYNVRITN----------------------- 247
L K G +EA L+S+ +++K + DV YNV + +
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC 432
Query: 248 --------TYG-GDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+G +RL + ++ M D G PD ++Y L+ CK A +++
Sbjct: 433 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 492
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
E + GC P+ T+ I L ++AY +F + V +PD T+ LL
Sbjct: 493 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G + + +YN L+ + D+A V++ + + C P+A TF + LC S +KA
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNVLRAWKKVEE 385
K+ + +PD L+ G K K +A K + +K P V+ V+
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD- 120
Query: 386 ELGLVPAPAVGDGQK 400
GL A D K
Sbjct: 121 --GLCKAERTRDAVK 133
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 9/287 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G A+ F +M++ G V+++N ++ + + RL + E+ +
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR- 257
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y ++ C G ++A L EM + V TVT T +++ L K+G EA
Sbjct: 258 GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEA 317
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL----KELIDEMRDAGLKPDTISYNFL 278
++ M +KGV+ +++ YN + G +RL K++ + M G P SYN L
Sbjct: 318 RLVFETMTEKGVEPNISTYNALMD---GYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNIL 374
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK+ MDEAK + + +P+ T+ T + LC G +A +FKE
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVLRAWKKVE 384
+P+ T +L++G K + EA ++++++ KK PN++ +E
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 136/265 (51%), Gaps = 3/265 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ +F +M + SV F L + + + Y V L +++ + ++ + S +
Sbjct: 70 DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLNV 128
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C D A+ +L +M G+ T T+ ++N L +G +EA L++EM ++G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 234 VDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ +V +YN I G+ ++ +M G KPD ++YN ++ CK+ ++++A
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + + G PN T+ ++ C G ++A ++FKE V +PD T+ +LV+GL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNV 376
K+ + EA+ V T+ +K PN+
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNI 333
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + + A + F+ M G V S+N L+ +SR D+ L E+ K
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++Y L++ C G +AL + EM + G+ VTY+ +L+ K G+ +EA
Sbjct: 399 -LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEA 457
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L M++K ++ ++ + + I + G E KEL ++ G++P +Y ++
Sbjct: 458 LKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG 517
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + DEA ++ +E++G PN+ ++ I + + A ++ E V +
Sbjct: 518 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSAN 577
Query: 342 FNTVKLLVE 350
+T ++L++
Sbjct: 578 LSTFQMLLD 586
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 136/277 (49%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + GM A F+ M E G ++ ++NAL+ RL ++ +F EI +
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF-EIMIRQ 362
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P SY +L+ C S D+A LL EM +K + TVTY+T++ L + G +EA
Sbjct: 363 GCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEA 422
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ EM G+ ++ Y++ + +G E LK L+ M++ L+P+ + + L+
Sbjct: 423 LNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK-LLKSMQEKKLEPNIVHHTILIE 481
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
++ AK+++ L +G P T+ I L G D+AY +F++ +P
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
+ + ++++G ++ + A +I + K+F N+
Sbjct: 542 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANL 578
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 148/295 (50%), Gaps = 10/295 (3%)
Query: 63 YAQDLTVRRLAKS---KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
Y + +R + K +R +++ T + S +P + L +R++ G +D +
Sbjct: 253 YTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNIL---LRAFLNQGKWDEGEKL 309
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+M G + ++++ L+ + C R+ + + +L I K+ L+PD SY L+ +
Sbjct: 310 VAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE--LTPDTYSYDPLISAL 367
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G D A+ +++ M + G V Y T+L L K GNA +A +++++ G +V
Sbjct: 368 CKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNV 427
Query: 239 AAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
++YN I+ + GD R ++ M G+ PD I+YN L++C C++ +++EA + +
Sbjct: 428 SSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDD 487
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+E++G P ++ + LC D A +F E + P+ T LL+EG+
Sbjct: 488 MEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 9/301 (2%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELG 127
+ R K+ +F++ +E N T + LC LI+ + + A R + ++
Sbjct: 85 LNRSCKAGKFNESLYFLECLVNK-GYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
P V ++NA++ + + + + + K PD ++Y +++ S C+ A
Sbjct: 144 EP-DVFAYNAVISGFCKVNQIEAATQVLNRM-KARGFLPDIVTYNIMIGSLCNRRKLGLA 201
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L +L+++ T +TYT ++ +G EA +L EM +G+ D+ YN I
Sbjct: 202 LTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 261
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G ER ELI + G +PD ISYN L+ + DE +K+ + GC PN
Sbjct: 262 MCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPN 321
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGV 364
T+ I LC G D+A V K VM+ K PD + L+ L K+ ++ A G+
Sbjct: 322 KVTYSILISSLCRFGRIDEAISVLK--VMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379
Query: 365 I 365
+
Sbjct: 380 M 380
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + AM+ ++M G + ++NA++ + + ++ L + K
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK- 281
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ISY +LL++ + G D+ +L+ EM ++G E VTY+ +++ L + G +EA
Sbjct: 282 GCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 341
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M +K + D +Y+ I+ G + ++D M G PD ++YN ++
Sbjct: 342 ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 401
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CKN ++A +++ L GC PN +++ T I L G+ +A + + PD
Sbjct: 402 LCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPD 461
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T L+ L + ++EA G++ +++ F P V+
Sbjct: 462 EITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 498
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 6/283 (2%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
+E +L L+ +AG F+ ++ + + G VI L+ + +K +
Sbjct: 77 RETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM 136
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ + + + PD +Y ++ C + A ++LN M+ +G VTY ++ L
Sbjct: 137 EIL--ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 194
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTI 273
+ A + ++ V Y + I T GG E +K L++EM GL PD
Sbjct: 195 RRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK-LLEEMLARGLLPDMY 253
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN ++ CK M++ A ++ L GC P+ ++ + G +D+ K+ E
Sbjct: 254 TYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
P+ T +L+ L + +I EA V++ I+K+ P+
Sbjct: 314 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 356
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 12/344 (3%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
S ++ D AL + + + P + + L +AK K++S +L + +
Sbjct: 69 SNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLG--SIAKKKQYSSAVSLC-NQMDLF 125
Query: 93 KITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
+T Y N LI + D A+ +M +LG I+FN L+ C ++ +
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEA 185
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
V LF+E+ + P+ ISY ++ C +G++ A+ + +ME + VTY T++
Sbjct: 186 VG-LFNEMVWSGH-EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTII 243
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
+ L K EA SEM +G+ DV YN + G L EM +
Sbjct: 244 DSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVM 303
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PDT+++N L+ CK M+ EA+ V E + E G PNA T+ + C D+A KV
Sbjct: 304 PDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKV 363
Query: 330 FKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+M+ K P+ ++ +L+ G K K++ EAK ++ + +K
Sbjct: 364 L--GIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 15/270 (5%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+R F +M++ +V+++N ++ + + RL ++ E+ + + PD ++Y +L
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR-GIPPDVVTYNTIL 278
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G ++A L EM + V TVT+ +++ L K+G EA + M +KG +
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338
Query: 236 LDVAAYNVRITNTYGGDPERLKELIDE-------MRDAGLKPDTISYNFLMTCYCKNEMM 288
+ YN + D L +DE M G P+ SYN L+ YCK++ M
Sbjct: 339 PNAYTYNALM------DGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRM 392
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+EAK++ + E +P+ T+ T + LC G +A +FKE +PD +L
Sbjct: 393 NEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSIL 452
Query: 349 VEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
++G K + EA +++ + +++ PN++
Sbjct: 453 LDGFCKHGHLDEALKLLKEMHERRIKPNII 482
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y D A++ M G ++ S+N L+ +S+ ++ L E+ +K
Sbjct: 347 LMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK- 405
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL+PD ++Y L++ C G +AL L EM + G+ + Y+ +L+ K G+ +EA
Sbjct: 406 NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEA 465
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L EM ++ + ++ Y + I + G E KEL ++ G++PD +YN ++
Sbjct: 466 LKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKG 525
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + DEA + + +E++G P++ ++ I + + A ++ E V D
Sbjct: 526 LLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585
Query: 342 FNTVKLLVE 350
+T ++L++
Sbjct: 586 SSTFQMLLD 594
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 136/274 (49%), Gaps = 7/274 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + GM A + M E G + ++NAL+ C +++ + + +L I K
Sbjct: 312 LVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK- 370
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P+ SY +L+ +C S ++A LL+EM K + TVTY+T++ L + G E
Sbjct: 371 -GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A L+ EM G+ D+ AY++ + +G E LK L+ EM + +KP+ I Y L+
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALK-LLKEMHERRIKPNIILYTILI 488
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
++ AK+++ L +G P+ T+ I L G D+AY+ F++ +
Sbjct: 489 RGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFL 548
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKF 372
PD + ++++G ++ + A +I + K+F
Sbjct: 549 PDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRF 582
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + G + A R F +M ++FN L+ + + + + + + +K
Sbjct: 277 ILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEK- 335
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +Y L+ +C D+A+++L M KG +Y ++N K EA
Sbjct: 336 GAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEA 395
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+RL SEM +K + D Y+ + G P L EM +GL PD ++Y+ L+
Sbjct: 396 KRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDG 455
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK+ +DEA K+ + + E PN + I + +G + A ++F + PD
Sbjct: 456 FCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPD 515
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++++GL+K+ EA R ++
Sbjct: 516 IWTYNVMIKGLLKEGLSDEAYEFFRKME 543
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 132/266 (49%), Gaps = 12/266 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I S + + + A+ +M + G P V+++N +L C+ +L ++ LF E+ +
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQL-NEATRLFKEMVGR 300
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CLYKQGNA 219
N+ PD +++ +L+ C G +A + M KG E TY +++ CL+ Q
Sbjct: 301 -NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ--M 357
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
+EA ++ M KG ++++YN+ I N Y +R+ E L+ EM + L PDT++Y+
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILI-NGYC-KSKRMNEAKRLLSEMSEKNLTPDTVTYS 415
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM C+ EA +++ + +G P+ + + C G+ D+A K+ KE
Sbjct: 416 TLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHER 475
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ +L+ G+ K++ AK
Sbjct: 476 RIKPNIILYTILIRGMFIAGKLEVAK 501
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++G DH T++ M G + ++ LL + +++ +++ +F + +
Sbjct: 23 LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQ- 81
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ SY +L+ C D+A ELLNEM + G + VTY ++L+ L K G +EA
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+S M +G D YNV I + GD L +EM + G P +YN L++
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + + +++ + GC PN TF + C G+ +A+++F E + PD
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ L+ G+ K K EA+ ++R I+ P+++
Sbjct: 262 VVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A R F++M E G +V ++N+LL +R + +V LF ++ ++
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ- 221
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ LL C G +A L EM + G V+Y T++ + +G EA
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEA 281
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+RL EM + GV D+ +YN+ I + G + +L E+ +GL+PD SY+ ++ C
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ + A V++ + NG +P+A + LC ++ ++F+ V +P
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
LL+ L K K+ + + + ++ F P+V
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 149/330 (45%), Gaps = 4/330 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A ++ ++ SP + ++ + + L + ++ + L+ +
Sbjct: 69 EEARSVFRGMAAQGCSP--NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYG 126
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + G A+ F +M G P + +N L+ ++ + LF+E+ +K
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P +Y LL G + L +M +G T+ +L+ K G+ E
Sbjct: 187 -GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVE 245
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL+ EM G DV +YN + G P + L+ EM +G+ PD +SYN L+
Sbjct: 246 AHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K+ +D A K++ + ++G P+A ++ T I LC +G A+ VFK+ + P
Sbjct: 306 GYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D V LV GL + +++ E+ + + + K
Sbjct: 366 DAAVVIPLVIGLCRGERLTESCELFQAMVK 395
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+SY LL+ SG D N+M G T TY +L L + EEA ++
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M +G +V +Y++ I G + EL++EM D G +P+ ++Y L++ CK
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ EA ++ + GC P+ + I G+ +AY++F+E + IP T
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 348 LVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
L+ G +K + + + + +++ PN+
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T+SYN+L+ K+ D Y + GC PN T+ + LC + F++A VF+
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
P+ + +L+ GL + +K+ EA ++ I PNV+
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVV 123
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 135/256 (52%), Gaps = 5/256 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y +AG+ A+ F++M++ G I+F+ ++ +R R + FD + ++
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRF 251
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I Y L++ C +G +A ++ +M+ G+E TY+ V++ L + G A
Sbjct: 252 --EPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++++M G + +N +R+ + G PE++ ++ ++M+ G +PDTI+YNFL+
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRV-HVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C++E ++ A KV + + C NA+TF T ++ + + A++++ + + P
Sbjct: 369 THCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 341 DFNTVKLLVEGLVKKK 356
+ T +L+ K
Sbjct: 429 NTVTYNILMRMFAGSK 444
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 159/321 (49%), Gaps = 16/321 (4%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHA 116
V + A + + L++ +R S+ ++ +S K+ +P + NL+R + +AG A
Sbjct: 218 VPDQIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVI---VYTNLVRGWCRAGEISEA 274
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTR----SRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ F M G +V +++ ++ A R SR +D + D +P+ I++
Sbjct: 275 EKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS-----GCAPNAITFN 329
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L++ H +G +K L++ N+M+ G E T+TY ++ + N E A ++ + M KK
Sbjct: 330 NLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKK 389
Query: 233 GVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+++ + +N D + +M +A +P+T++YN LM + ++ D
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMV 449
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVE 350
K+ + +++ PN T+R + CG G+++ AYK+FKE V + P + ++++
Sbjct: 450 LKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 351 GLVKKKKIKEAKGVIRTIKKK 371
L + ++K+ + ++ + +K
Sbjct: 510 QLRRAGQLKKHEELVEKMIQK 530
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 117/238 (49%), Gaps = 3/238 (1%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N ++ + R +D L D + K N+ ++ +L++ + +G + +A+ N M
Sbjct: 154 YNEMIDLAGKVRQFDLAWHLID-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDP 253
E+ G + ++ V++ L ++ A EA+ + + K + DV Y N+ G+
Sbjct: 213 EDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+++ +M+ AG++P+ +Y+ ++ C+ + A V+ + ++GC+PNA TF
Sbjct: 272 SEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ +G +K +V+ + + PD T L+E + + ++ A V+ T+ KK
Sbjct: 332 MRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKK 389
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 175/398 (43%), Gaps = 53/398 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEP 98
DKA + + KH V +A + + K+ R +T+++ K P +
Sbjct: 27 DKATRVMGILEKHGKPDV---FAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHN 83
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQM--DELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
+ I ++ G D A++ F+++ D P ++I++ L+ A D+ L D
Sbjct: 84 IM---IGTFCGKGKIDLALKVFEELLKDNNCKP-TLITYTILIEAYILEGGIDEALKLLD 139
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ + L PD +Y ++ + C G D+A E + + ++G + +TY +L L Q
Sbjct: 140 EMLSR-GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQ 198
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRIT-------------------------NTYGG 251
G +E E+ SE+ +G + +V Y++ I+ + Y
Sbjct: 199 GKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCY 258
Query: 252 DP-----------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
DP + E +D M G PD ++YN +M CKN D A +++ L+E
Sbjct: 259 DPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDE 318
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
GC PN +++ T + L SG+ +A + + + PD T L+ L + + E
Sbjct: 319 VGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDE 378
Query: 361 AKGVIR-TIKKKFPPNVLRAWKKVEEELGLVPAPAVGD 397
A G++ + +F PN++ ++K V LGL A + D
Sbjct: 379 AIGLLADMLSGRFQPNIV-SYKTV--LLGLCKAHRIDD 413
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 129/252 (51%), Gaps = 4/252 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R+ G +D + ++ G +V++++ L+ + C ++ + V ++ ++ K+
Sbjct: 191 LLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLV--KVMKE 248
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+PD Y L+ + C G D A+E L+ M G V Y T++ L K GN +
Sbjct: 249 KGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDH 308
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ ++++ G +V++YN ++ + GD R +I +M G+ PD I+YN L++
Sbjct: 309 AVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLIS 368
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C C++ M+DEA + + PN +++T + LC + D A +V + P
Sbjct: 369 CLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQP 428
Query: 341 DFNTVKLLVEGL 352
+ T LL+EG+
Sbjct: 429 NETTYTLLIEGI 440
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 139/278 (50%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I+ + + G A+ +MD+ G ++ +N ++ + RL + +F EI K
Sbjct: 195 IIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK- 253
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y +L+ C+S ++A L NEM + + VT+ +++ L K+G EA
Sbjct: 254 GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL--KELIDEMRDAGLKPDTISYNFLMT 280
+ + M +KGV+ + A YN + N Y + + + D M G P+ +SYN L+
Sbjct: 314 QGIIKIMIEKGVEPNYATYN-SLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILIN 372
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK + +DEA+++++ + G PN + T I LC +G +A ++FK+ P
Sbjct: 373 GYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSP 432
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D T +L++ L K + A + R ++ PN++
Sbjct: 433 DLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLV 470
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 3/262 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ +F+ M ++ F+ LL A R + Y V L I + + D + +L+
Sbjct: 68 ALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRI-ELLRIERDVFHFNILI 126
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
D A +L ++ G E VT+++++N L + A + EM G
Sbjct: 127 NCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQ 186
Query: 236 LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++ YN I G L+ +M AG +PD + YN ++ CK+ ++ EA +
Sbjct: 187 PNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDI 246
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ ++ G P+ T+ ++ LC S ++A +F E + ++ +PD T +LV+ L K
Sbjct: 247 FSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCK 306
Query: 355 KKKIKEAKGVIRT-IKKKFPPN 375
+ + EA+G+I+ I+K PN
Sbjct: 307 EGMLSEAQGIIKIMIEKGVEPN 328
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
+ A+ F ++ G V +++ L+ S ++ LF+E+ N+ PD +++
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEM-MSLNIMPDVVTF 297
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L+ C G +A ++ M KGVE TY +++N Q EA ++ M
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357
Query: 232 KGVDLDVAAYNVRIT-------------------------NTY-----------GGDPER 255
KG +V +YN+ I NT+ G
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+EL +M+ G PD ++ L+ CK +D A +++ ++++ PN T+ I
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477
Query: 316 HLCGSG 321
+ SG
Sbjct: 478 AMYKSG 483
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +A D A FD+M G + ++N L+ ++ + + LF ++ +
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQ- 428
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
SPD ++ +LL S C G D AL L M++ ++ VTY ++ +YK G
Sbjct: 429 GCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 168/342 (49%), Gaps = 15/342 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALD+++ + + P + + L V +AK K+F + L + H ++ + Y C
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNV--IAKMKKFDVVINLCD-HLQIMGVSHDLYTC 110
Query: 102 NLIRS-YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
NL+ + + Q+ A +M +LG +++F +L+ C +R+ + + ++ +
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV- 169
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + PD + Y ++ S C +G + AL L ++MEN G+ V YT+++N L G
Sbjct: 170 -EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL--KELIDEMRDAGLKPDTISYNF 277
+A+ L M K+ + DV +N I + + + + L +EL +EM + P+ +Y
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALI-DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +C +DEA++++ +E GC P+ + + I C D A K+F E M
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE--MSQ 345
Query: 338 KIPDFNTVKL--LVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
K NT+ L++G + K A+ V + + PPN+
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 128/252 (50%), Gaps = 8/252 (3%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
VI+FNAL+ A + + L++E+ + +++P+ +Y L+ C G D+A ++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRM-SIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
ME KG V YT+++N K ++A +++ EM +KG+ + Y I +G
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG-FGQ 364
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL---EENGCSPN 306
G P +E+ M G+ P+ +YN L+ C C N + +A ++E + E +G +PN
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ ++ LC +G +KA VF++ T ++++G+ K K+K A +
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 367 TI-KKKFPPNVL 377
++ K PNV+
Sbjct: 485 SLPSKGVKPNVV 496
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 146/332 (43%), Gaps = 9/332 (2%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN- 102
AL ++ + + P Y V L S R+ D ++L+ KI + N
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTS--LVNGLCNSGRWRDADSLLRG-MTKRKIKPDVITFNA 252
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + G F A +++M + ++ ++ +L+ D+ +F + K
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK- 311
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y L+ C D A+++ EM KG+ T+TYTT++ + G A
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVA 371
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDA---GLKPDTISYNFL 278
+ ++S M +GV ++ YNV + Y G ++ + ++M+ G+ P+ +YN L
Sbjct: 372 QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVL 431
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C N +++A V+E + + T+ I +C +G A +F
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P+ T ++ GL ++ EA + R +K+
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G D A + F M+ G V+++ +L+ + + D +F E+ +K
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+ + I+Y L++ G + A E+ + M ++GV TY +L+CL G ++
Sbjct: 347 -GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 222 AERLWSEMEKK---GVDLDVAAYNVRITN-TYGGDPERLKELIDEMR------------- 264
A ++ +M+K+ GV ++ YNV + Y G E+ + ++MR
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 265 ----------------------DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
G+KP+ ++Y +++ + + EA ++ ++E+G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 303 CS 304
S
Sbjct: 526 VS 527
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ G + A D+M +VI++NAL+ + +L ++ LFD I K+
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQ- 402
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ I++ LL +C G ++A L M KG TY ++ ++G EE
Sbjct: 403 GLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEV 462
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L +EM+ +GV D YN+ I+ +P++ LIDEM D GLKP ++YN L+
Sbjct: 463 KNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG 522
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC + A + + +E+ G N T+ I C G + A + E + IP+
Sbjct: 523 YCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN 582
Query: 342 FNTVKLLVEGLVKKKKIKEAKG 363
T +++ E +++K + + +G
Sbjct: 583 RTTYEIIKEEMMEKGFLPDIEG 604
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 153/295 (51%), Gaps = 9/295 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + A++ F++M G +V+++N+L+ C +L ++ +L DE+
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKL-NEAKVLLDEMLSS 367
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL P+ I+Y L+ +C ++A EL + + +G+ +T+ T+L+ K G EE
Sbjct: 368 -NLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEE 426
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M +KG + + YN I G E +K L++EM+ G+K DT++YN L++
Sbjct: 427 AFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILIS 486
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C+ + +A ++ + + + G P+ T+ + C GN A + K+ +
Sbjct: 487 AWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWA 546
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEEL---GLVP 391
+ T +L++G +K K+++A G++ ++K PN ++ ++EE+ G +P
Sbjct: 547 NVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN-RTTYEIIKEEMMEKGFLP 600
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 141/276 (51%), Gaps = 10/276 (3%)
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CN L+ + + F + +M ++I+FN ++ + +K + D++
Sbjct: 198 CNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDM- 256
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDK---ALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
K + P+ ++Y L+ +C G K A +L EM V +VT+ +++ K
Sbjct: 257 KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKD 316
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISY 275
N A +++ EM+ +G+ V YN + G K L+DEM + LKP+ I+Y
Sbjct: 317 ENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITY 376
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ YCK ++++EA+++++ + + G +PN TF T ++ C G ++A+ + + VM
Sbjct: 377 NALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL--QKVM 434
Query: 336 VHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ K +P+ +T L+ G ++ K++E K ++ ++
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 127/276 (46%), Gaps = 33/276 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +Y + + F + + SV+S N LL A + + V ++ E+ ++
Sbjct: 166 LVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRR- 224
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ I++ ++ C G +KA +++++M+ G VTY T+++ K G
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMG----- 279
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
R+ Y D ++ EM + + P+++++N L+ +
Sbjct: 280 ---------------------RVGKMYKADA-----ILKEMVENKVSPNSVTFNVLIDGF 313
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK+E + A KV+E ++ G P T+ + + LC G ++A + E + + P+
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV 373
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
T L+ G KKK ++EA+ + I K+ PNV+
Sbjct: 374 ITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVI 409
>gi|210077735|gb|ACJ07056.1| putative membrane-associated salt-inducible protein [Triticum
urartu]
Length = 289
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 127/239 (53%), Gaps = 7/239 (2%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+GQAG+ A+ TF +P S S NALLFAC + + + +F P + + P
Sbjct: 57 FGQAGLLPDAISTFQS-----SP-STRSLNALLFACIVAGNHTEAARIFQTFPDAHRVKP 110
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ ++KS +SG++ + +EM +GV+ T T+T + YK+ ++ E++
Sbjct: 111 NAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVI 170
Query: 227 SEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
M+K + YN R+ G K L+ EM G KP+ ++YN L+ +CK
Sbjct: 171 KLMKKHSCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKE 230
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++EAK++Y+ + + G ++ + T I+HLC +G+FD A V+ E + + +P F+T
Sbjct: 231 GDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPCFST 289
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Query: 217 GNAEEAERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
GN EA R++ + V + +N I + + G + DEM G+KP +
Sbjct: 90 GNHTEAARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATT 149
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ + + K E D+ +KV + ++++ C + + + LC G A + E
Sbjct: 150 FTAAIAGFYKEERFDDVEKVIKLMKKHSCGESLQVYNARVQGLCKLGRNGDAKALLSEMA 209
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P++ T L+ G K+ ++EAK + + + KK
Sbjct: 210 KKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGKK 246
>gi|125531614|gb|EAY78179.1| hypothetical protein OsI_33227 [Oryza sativa Indica Group]
Length = 342
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 149/289 (51%), Gaps = 7/289 (2%)
Query: 93 KITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+I+ Y N++ R++ G A D+M E G R+ +SF+ L+ A R + D
Sbjct: 40 RISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTPVSFHTLIAAYCRDGV-DAG 98
Query: 152 PILFDEIP-KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
P L ++ ++ L PD ++Y ++ C G KA ++L+EM KGV TVTY T++
Sbjct: 99 PALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRAKGVMPNTVTYNTLI 158
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
+ G+ A R+ EM K V+LD+ YN I + G ++++ L+ E+ A L+
Sbjct: 159 HGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLFNEGKMKKVEHLLRELDRAKLE 218
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +++ L+ +CK + + A ++ ++++G PN TT++ I C + + + A V
Sbjct: 219 PNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDV 278
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK--KFPPNV 376
+ + PD + +GL K KK+ A+ +R++ KF P+V
Sbjct: 279 MGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAEN-LRSLNNGLKFIPDV 326
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 5/250 (2%)
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
PR V+S N + A R + F E+ ++ +SP+ + ++L++ CD G + A
Sbjct: 8 PR-VVSCNVFISAALGLRRPEIALSFFREM-RRCRISPNIYTANMVLRAFCDLGRTADAA 65
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQG-NAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
E+L++M GV T V++ T++ + G +A A +L +ME++G+ DV Y+ I
Sbjct: 66 EVLDKMPEWGVGRTPVSFHTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHG 125
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + +++ EMR G+ P+T++YN L+ Y A +V+E + +N +
Sbjct: 126 LCKEGRMGKANQVLSEMRAKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELD 185
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ I L G K + +E P+ +T L+ G K + + A ++
Sbjct: 186 IVTYNALILGLFNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLN 245
Query: 367 TIKKK-FPPN 375
+KK F PN
Sbjct: 246 VMKKSGFHPN 255
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 146/304 (48%), Gaps = 15/304 (4%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
+L K+K F I +ES P I L++ Y G + A +M G
Sbjct: 241 KLKKAKGFLGI---MESFGIKPTIVTYN---TLVQGYSLRGRIEGARMIISEMKSKGFQP 294
Query: 131 SVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ ++N +L + C R + + + K L PD +SY +L++ ++G + A
Sbjct: 295 DLQTYNPILSWMCNEGRASEVLREM-----KGIGLVPDSVSYNILIRGCSNNGDLETAFA 349
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+EM +G+ T TY T+++ L+ + E AE L E+ +KG+ LD YN+ + N Y
Sbjct: 350 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI-VINGY 408
Query: 250 --GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
GD ++ L DEM G+KP +Y L+ C+ EA +++E + G P+
Sbjct: 409 CQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDL 468
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T + C +GN D+A+ + KE ++ PD T L+ GL + K +EA+ ++
Sbjct: 469 VMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGE 528
Query: 368 IKKK 371
+K++
Sbjct: 529 MKRR 532
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G + A D+M + G + ++N L+ + IL EI +K
Sbjct: 334 LIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK- 392
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D ++Y +++ +C G + KA L +EM G++ T TYT+++ L ++ EA
Sbjct: 393 GIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREA 452
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++ KG+ D+ N + + G+ +R L+ EM + PD ++YN LM
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +EA+++ ++ G P+ ++ T I G+ A+ V E + + P
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPT 572
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
T L++GL K + + A+ ++R +K + PN
Sbjct: 573 LLTYNALLKGLSKNQDGELAEELLREMKSEGIVPN 607
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 2/265 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V + Y + + L + E LI + + +I Y Q G A
Sbjct: 360 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFA 419
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
D+M G + ++ +L++ R + LF+++ K + PD + L+ H
Sbjct: 420 LHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGK-GMKPDLVMMNTLMDGH 478
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C +G+ D+A LL EM+ ++ VTY ++ L +G EEA L EM+++G+ D
Sbjct: 479 CATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 538
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+YN I+ + GD + + DEM G P ++YN L+ KN+ + A+++
Sbjct: 539 ISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLRE 598
Query: 298 LEENGCSPNATTFRTWIYHLCGSGN 322
++ G PN ++F + I + S N
Sbjct: 599 MKSEGIVPNDSSFCSVIEAMSKSDN 623
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 38/269 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R Y Q M D A+ F M E G + N +L +R + + + ++ +
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADM-YRM 220
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + ++ +++ C G KA L ME+ G++ T VTY T++ +G E A
Sbjct: 221 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGA 280
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ SEM+ KG D+ YN + ++ + R E++ EM+ GL PD++SYN L+
Sbjct: 281 RMIISEMKSKGFQPDLQTYNPIL--SWMCNEGRASEVLREMKGIGLVPDSVSYNILI--- 335
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
GCS N G+ + A+ E V +P F
Sbjct: 336 ------------------RGCSNN--------------GDLETAFAYRDEMVKQGMVPTF 363
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L+ GL + KI+ A+ +IR I++K
Sbjct: 364 YTYNTLIHGLFMENKIEAAEILIREIREK 392
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 256 LKELIDEM---RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+++L DE+ D TI ++F++ YC+ M+DEA + + ++E G P T
Sbjct: 137 VRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNH 196
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ L + A+ + + + + T +++ L K+ K+K+AKG +
Sbjct: 197 ILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL 249
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 9/267 (3%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +M+E G +V++++ L+ + + R ++ +F + K ++SP +Y L+
Sbjct: 99 AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLI 157
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C+ +A LLNEM + + VT+ +++ K+G AE + M + GV+
Sbjct: 158 QGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE 217
Query: 236 LDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
DV YN + YG + ++L D M G KPD SY+ L+ YCK + +DEA
Sbjct: 218 PDVVTYNSLM---YGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEA 274
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K+++ + G +PN ++ T I+ LC G +A +FK +P+ T +L++G
Sbjct: 275 KQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDG 334
Query: 352 LVKKKKIKEAKGVIRTIKKKF-PPNVL 377
K+ + +A + R ++ + PN++
Sbjct: 335 FCKQGYLGKAFRLFRAMQSTYLKPNLV 361
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 123/263 (46%), Gaps = 6/263 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI S + + A+ F M ++ ++ +L+ C SR + + L +E+
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR-WKEASALLNEM-TS 178
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ P+ +++ +L+ + C G A +L M GVE VTY +++ E
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L+ M KG DV +Y++ I N Y + K+L +EM G P+ +SYN L+
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILI-NGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ + EA+ +++ + NG PN T+ + C G KA+++F+ +
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
P+ +LV + K +K+A+
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDAR 380
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 137/333 (41%), Gaps = 37/333 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALDI+S + SP Y ++ L R+ + L+ + +
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTS--LIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFN 189
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ ++ + G A M E+G V+++N+L++ + + LFD + K
Sbjct: 190 VLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITK 249
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD SY +L+ +C + D+A +L NEM ++G V+Y T+++ L + G E
Sbjct: 250 -GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLRE 308
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A+ L+ M G N+ P+ +Y L+
Sbjct: 309 AQDLFKNMHTNG--------NL--------------------------PNLYTYAILLDG 334
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK + +A +++ ++ PN + + +C SGN A ++F E ++ P+
Sbjct: 335 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPN 394
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
++ GL K+ + EA R ++ P
Sbjct: 395 VQIYTTIINGLCKEGLLDEALEAFRNMEDDGCP 427
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
LSP+ + +L+ C D +L + G++ T VT+TT++N L K G +A
Sbjct: 6 LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L+ +M +G D Y I G+ L +M +AG + + ++Y+ L+
Sbjct: 66 ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSL 125
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK ++EA ++ ++ SP T+ + I LC + +A + E ++ +P+
Sbjct: 126 CKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNV 185
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTI 368
T +LV+ K+ K+ A+GV++T+
Sbjct: 186 VTFNVLVDTFCKEGKVLAAEGVLKTM 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 39/265 (14%)
Query: 150 KVPILFDEIPK--KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+V + F + K K L P +++ L+ G +A+EL ++M +G + TYT
Sbjct: 25 RVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYT 84
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-------------------- 247
T++N L K G A L+ +ME+ G L+V Y+ I +
Sbjct: 85 TIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAK 144
Query: 248 -------TYGG------DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
TY + R KE L++EM + P+ +++N L+ +CK + A
Sbjct: 145 DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAA 204
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ V + + E G P+ T+ + +Y +A K+F + PD + +L+ G
Sbjct: 205 EGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILING 264
Query: 352 LVKKKKIKEAKGVIR-TIKKKFPPN 375
K K+I EAK + I + PN
Sbjct: 265 YCKAKRIDEAKQLFNEMIHQGSTPN 289
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 6/195 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y +A D A + F++M G+ + +S+N L+ C RL + LF +
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQD-LFKNMHTN 319
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL P+ +Y +LL C G KA L M++ ++ V Y ++N + K GN ++
Sbjct: 320 GNL-PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKD 378
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+SE+ G+ +V Y I G + E M D G PD SYN ++
Sbjct: 379 ARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIR 438
Query: 281 CYCKNEMMDEAKKVY 295
+ +++ DE++ V+
Sbjct: 439 GFLQHK--DESRAVH 451
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 115/291 (39%), Gaps = 22/291 (7%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYA---S 57
MTSL + + T + + ++ K +E + + Y+S+ Y+
Sbjct: 176 MTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTE 235
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN--------------- 102
V +R D+ + + K FS LI + +I + L N
Sbjct: 236 VVEARKLFDVMITKGCKPDVFS-YSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294
Query: 103 -LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI Q G A F M G ++ ++ LL + K LF +
Sbjct: 295 TLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQST 354
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y L P+ + Y +L+ + C SG+ A EL +E+ G++ YTT++N L K+G +E
Sbjct: 355 Y-LKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPD 271
A + ME G D +YNV I D R LI EMRD G D
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M AGL P+T + N L+ C+C+ + +D V + G P TF T I L G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
F +A ++F + V PD T ++ GL K + A G+ + +++
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEE 108
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 12/313 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL ++ + Y P Y + +R L K+ R + + + +
Sbjct: 1270 DAHGALSLFEEMRHQYCRPDVFTYTE--LIRGLGKAGRIDEAYHFFCEMQREGCRPDTVF 1327
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR-LYDKVPILFDEI 158
+ N+I G+AG D AM+ F +M+ L SV+++N ++ A S+ +VP F+ +
Sbjct: 1328 MNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERM 1387
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ +SP +Y +L+ C + +KA+ LL EM+ KG Y ++++ L K
Sbjct: 1388 -KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 1446
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISY 275
+ A L+ E+++ Y V I + G RL + I DEM G PD +Y
Sbjct: 1447 YDLACELFQELKENCGSSSARVYAVMIKHL--GKAGRLDDAINMFDEMNKLGCAPDVYAY 1504
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KE 332
N LM+ + M+DEA ++E+GC P+ ++ + L +G +A ++ K+
Sbjct: 1505 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 1564
Query: 333 SVMVHKIPDFNTV 345
S + + +NTV
Sbjct: 1565 STVRPDVVSYNTV 1577
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 8/305 (2%)
Query: 76 KRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+++ ++ +I+ +P P L +++R G A M A+ F Q+ +
Sbjct: 1127 EQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQA 1186
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N+++ Y+KV L++E+ + + PD ++Y L+ + C G D A++LLNEM
Sbjct: 1187 YNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEM 1246
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
+ G++ TT YT ++ +K +A A L+ EM + DV Y I G
Sbjct: 1247 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGL--GKAG 1304
Query: 255 RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
R+ E EM+ G +PDT+ N ++ K +D+A K+++ +E C P+ T+
Sbjct: 1305 RIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYN 1364
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T I L S + + E + I P T +L++G K ++++A ++ + +
Sbjct: 1365 TIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 1424
Query: 371 K-FPP 374
K FPP
Sbjct: 1425 KGFPP 1429
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+KR+ L + K + + +I+ G+AG D A+ FD+M++LG
Sbjct: 1441 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPD 1500
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V ++NAL+ R+ + D+ + +++ PD SY ++L +G +A+E+L
Sbjct: 1501 VYAYNALMSGLARTGMLDEALSTMRRM-QEHGCIPDINSYNIILNGLAKTGGPHRAMEML 1559
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ M+ V V+Y TVL L G EEA +L EM G + D+ Y+
Sbjct: 1560 SNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYS 1610
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 38/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + G D A++ ++M E+G + + L+ + LF+E+ +Y
Sbjct: 1226 LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 1285
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y L++ +G D+A EM+ +G TV ++N L K G ++A
Sbjct: 1286 -CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 1344
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP---------ERLKE--------------- 258
+L+ EME V YN I + ER+KE
Sbjct: 1345 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 1404
Query: 259 -------------LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
L++EM + G P +Y L+ K + D A ++++ L+EN S
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 1464
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A + I HL +G D A +F E + PD L+ GL + + EA +
Sbjct: 1465 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 1524
Query: 366 RTIKK 370
R +++
Sbjct: 1525 RRMQE 1529
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 173/390 (44%), Gaps = 34/390 (8%)
Query: 1 MTSLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDI------------- 47
+ LRH++ L A+T+ ++ A + + +R +F P++ L+
Sbjct: 19 LQPLRHLKVL--ASTSTNNTKDAYFALIHHITNIVRRDFYPERTLNKLNAPVTSELVFRV 76
Query: 48 -------------YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN-DPK 93
+ + S+ Y +P S Y + ++ LAKSKR+S + LI K+ +P+
Sbjct: 77 LRACSRSPTESLRFFNWSRAYYTPTSIEYEE--LIKILAKSKRYSSMWKLITQMKDQNPQ 134
Query: 94 IT-QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+ + ++I YG++G+ D A+ F+Q + L ++V +N+LLFA +L+
Sbjct: 135 FSISSETVRSIIEEYGRSGLIDQAVEVFNQCNSLNCEQNVDIYNSLLFALCEVKLFHGAY 194
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L + +K L+P+K +Y +L+ C +G +A L EM KG ++
Sbjct: 195 ALVRRLIRK-GLAPNKTTYSVLVNGWCSNGKFKEAQLFLEEMSKKGFNPPVRGRDLLIEG 253
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPD 271
L G E A+ + +M K+G DV +N I G+ + ++ +R G PD
Sbjct: 254 LLNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNSGEVDFCVDMYYSLRKLGFCPD 313
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
SY L+ K +DEA K+ E+G P + I +C G FD A+ F
Sbjct: 314 INSYKILIPAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQFDDAFCFFG 373
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
E + P+ +L+ + K EA
Sbjct: 374 EMKVKGHPPNRPVYTMLITMCGRGGKYVEA 403
>gi|125553201|gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+L+ + G D A +LG + +S+N +L C R +L DE+
Sbjct: 134 SLLNALVSNGRTDAARDMLPLAPKLGVRLNAVSYNIILKGVCLRDGFMGARGVL-DEMLS 192
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + P +++ L+ S C G A L++EM +GV TY ++ L
Sbjct: 193 R-GVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHA 251
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+AE+L +ME +G DV Y V +++ GD + ++EL+ MR LKPD SYN L+
Sbjct: 252 DAEKLMFDMEYRGCQADVVNYGVLMSSRARRGDADGVRELLSAMRKRKLKPDDASYNILI 311
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C C DEA + ++ G P A T+R + C + +FD +VF +
Sbjct: 312 RCLCDAGRADEAHRALLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHC 371
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P T + L GL + K +EA V+ + ++
Sbjct: 372 PQARTFRHLARGLGEDGKAEEAFFVLEQMARR 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 104/239 (43%), Gaps = 20/239 (8%)
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+L+ R+RL+ VP L + + +P + + + H + S A +
Sbjct: 66 VLYRLARARLFPLVPPLLAALHSRG--APLRPTVFAAVIDHLGAASCPDAAVGVFRTVPA 123
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERL 256
+ T+ ++LN L G + A + K GV L+ +YN+ + D
Sbjct: 124 FCSHSAATFHSLLNALVSNGRTDAARDMLPLAPKLGVRLNAVSYNIILKGVCLRDGFMGA 183
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+ ++DEM G++P +++N L+ C+ + A+++ + + G +PNA T+ +
Sbjct: 184 RGVLDEMLSRGVRPTVVTFNTLVGSACREGELGAAERLIDEMARRGVAPNAATYALLMRG 243
Query: 317 LCGSGN--------FDKAYKVFKESVMVHKI--------PDFNTVKLLVEGLVKKKKIK 359
LC + FD Y+ + V+ + + D + V+ L+ + +K+K+K
Sbjct: 244 LCDADRHADAEKLMFDMEYRGCQADVVNYGVLMSSRARRGDADGVRELLSAM-RKRKLK 301
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 164/328 (50%), Gaps = 11/328 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLC 101
+AL+++ + + P +Y+ + + K+ RF D +E + PK ++
Sbjct: 478 EALEMFDEMKQKGIVP--EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 535
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
I YG++G A++ ++ M G V++ NA+LF +S +F E+ K
Sbjct: 536 -FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL-KA 593
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD I+Y +++K + D+A+++ +M + ++++ LYK G +E
Sbjct: 594 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 653
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A R++ ++++ ++ YN + G ++KE L++EM + P+ I+YN +
Sbjct: 654 AWRIFYQLKEMNLEPTDGTYNTLLAGL--GREGKVKEVMHLLEEMYHSNYPPNLITYNTI 711
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C CKN +++A + + GC P+ +++ T IY L +++A+ +F + V
Sbjct: 712 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-L 770
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
IPD+ T+ ++ VK +KEA +I+
Sbjct: 771 IPDYATLCTILPSFVKIGLMKEALHIIK 798
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 7/315 (2%)
Query: 67 LTVRRLAKSKRFSDI-ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ ++ L + R SD + + K+D K + Y+ L+ +G G M ++ M
Sbjct: 395 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI-TLLDKFGDNGDSQSVMEIWNAMKA 453
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +V+++ A++ A C R+++ + +FDE+ +K + P++ SY L+ +
Sbjct: 454 DGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQK-GIVPEQYSYNSLISGFLKADRF 511
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-V 243
ALEL M+ G + T+ +N K G + +A + + M+ KG+ DV A N V
Sbjct: 512 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 571
Query: 244 RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G K + E++ G+ PDTI+Y ++ C K DEA K++ + EN C
Sbjct: 572 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 631
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ + I L +G D+A+++F + ++ P T L+ GL ++ K+KE
Sbjct: 632 VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 691
Query: 364 VIRTI-KKKFPPNVL 377
++ + +PPN++
Sbjct: 692 LLEEMYHSNYPPNLI 706
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
++ L K K+ + L++ K+ + +LI + D A F +M ELG
Sbjct: 852 IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 911
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++N LL A +S +++ + +E+ +K ++Y ++ S ++A+
Sbjct: 912 GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK-GYESTYVTYNTIISGLVKSRRLEQAI 970
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-N 247
+L + ++G T TY +L+ L K G E+AE L++EM + G + YN+ + +
Sbjct: 971 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 1030
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ E++ L +M D G+ PD SY ++ CK +++ + L E G P+
Sbjct: 1031 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1090
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIR 366
T+ I L S ++A +F E +P+ T L+ L K K EA K
Sbjct: 1091 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1150
Query: 367 TIKKKFPPNVL 377
+ K + PNV
Sbjct: 1151 LLTKGWKPNVF 1161
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+LC LI+ + A + G +N+L+ L D LF E+
Sbjct: 847 FLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM 906
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ PD+ +Y LLL + S ++ L++ EM KG E T VTY T+++ L K
Sbjct: 907 -KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 965
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E+A L+ + +G Y + G E + L +EM + G K + YN
Sbjct: 966 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 1025
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + ++ +++ + + G +P+ ++ I LC +G + F++ + +
Sbjct: 1026 LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG 1085
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T LL++GL K K+++EA + ++KK PN+
Sbjct: 1086 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1125
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G++ + ++ ++M G + +++N ++ +SR ++ L+ + +
Sbjct: 921 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ- 979
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP +YG LL +G + A L NEM G + Y +LN GN E+
Sbjct: 980 GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 1039
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M +G++ D+ +Y + I T G ++ + GL+PD I+YN L+
Sbjct: 1040 CHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 1099
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K++ ++EA ++ +++ G PN T+ + I HL +G +A K+++E + P+
Sbjct: 1100 LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPN 1159
Query: 342 FNTVKLLVEG 351
T L+ G
Sbjct: 1160 VFTYNALIRG 1169
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 54/343 (15%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI------ESH 88
++S FD + AL++Y + P Y +V +A KR D+ET++ E+H
Sbjct: 296 VKSGFDRE-ALEVYRVMMVDGVVPSVRTY----SVLMVAFGKR-RDVETVLWLLREMEAH 349
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
P + +C IR GQA FD A R +M+ G
Sbjct: 350 GVKPNVYSYT-IC--IRVLGQAKRFDEAYRILAKMENEGC-------------------- 386
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
PD I++ +L++ CD+G A ++ +M+ + VTY T
Sbjct: 387 ----------------KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 430
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDA 266
+L+ G+++ +W+ M+ G + +V AY I G E L E+ DEM+
Sbjct: 431 LLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQK 489
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G+ P+ SYN L++ + K + +A ++++ ++ +G PN T +I + SG KA
Sbjct: 490 GIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 549
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ ++ +PD ++ GL K ++ AK V +K
Sbjct: 550 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 592
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 5/285 (1%)
Query: 94 ITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV- 151
I E Y N LI + +A F A+ F MD G + + +LF + + +
Sbjct: 491 IVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN--GYTHVLFINYYGKSGESIK 548
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
I E+ K + PD ++ +L SG A + +E++ GV T+TYT ++
Sbjct: 549 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 608
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
C K +EA +++ +M + DV A N I Y G + + ++++ L+P
Sbjct: 609 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 668
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+YN L+ + + E + E + + PN T+ T + LC +G + A +
Sbjct: 669 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 728
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
IPD ++ ++ GLVK+++ EA + +KK P+
Sbjct: 729 YSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 773
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 130/283 (45%), Gaps = 8/283 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
+ +L + + KS R ++ + E H+ + T Y +I ++ + A+ +
Sbjct: 916 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY-NTIISGLVKSRRLEQAIDLYY 974
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+ G + ++ LL ++ + LF+E+ +Y + Y +LL H +
Sbjct: 975 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM-LEYGCKANCTIYNILLNGHRIA 1033
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G+++K L +M ++G+ +YT +++ L K G + + ++ + G++ D+ Y
Sbjct: 1034 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 1093
Query: 242 NVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N+ I G +RL+E L +EM+ G+ P+ +YN L+ K EA K+YE L
Sbjct: 1094 NLLIDGL--GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1151
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
G PN T+ I SG+ D AY + ++ +P+
Sbjct: 1152 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 135/295 (45%), Gaps = 10/295 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ ALD+ S++ P S Y + + L K +R+++ ++ K I LC
Sbjct: 722 NDALDMLYSMTTKGCIPDLSSY--NTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLC 778
Query: 102 NLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++ S+ + G+ A+ D + G+ S ++L+ + +K I F EI
Sbjct: 779 TILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK-SIEFAEIIA 837
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ D L+K C + +A EL+ + ++ GV + T Y +++ L + +
Sbjct: 838 SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLID 897
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNF 277
AE L++EM++ G D YN+ + G R++E++ +EM G + ++YN
Sbjct: 898 IAEGLFAEMKELGCGPDEFTYNLLLDAM--GKSMRIEEMLKVQEEMHRKGYESTYVTYNT 955
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+++ K+ +++A +Y L G SP T+ + L +G + A +F E
Sbjct: 956 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 1010
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 128/346 (36%), Gaps = 49/346 (14%)
Query: 11 CTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR 70
C + GS ++ + VS S S P K + V P R A + +
Sbjct: 131 CCSGVLGGSPPSSRTAGVS---SPGLSPSRPSKRRIGRARVQPRAPPPCDERRAAEDVIH 187
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCN----LIRSYGQAGMFDHAMRTFDQMDEL 126
L + ++ S P++ Q CN L+R +G+ G D A FD M
Sbjct: 188 ALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVG--DMA-EVFDVMQ-- 242
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
R ++ N FA I GL ++ G
Sbjct: 243 ---RQIVKANVGTFAA--------------------------IFGGLGVE-----GGLRS 268
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A L M+ G+ + TY ++ L K G EA ++ M GV V Y+V +
Sbjct: 269 APVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMV 328
Query: 247 NTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+G D E + L+ EM G+KP+ SY + + + DEA ++ +E GC
Sbjct: 329 -AFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCK 387
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
P+ T I LC +G A VF + + PD T L++
Sbjct: 388 PDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLD 433
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 104/267 (38%), Gaps = 41/267 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYL 100
++A+D+Y ++ SP Y L L K+ R D E L E + K Y
Sbjct: 967 EQAIDLYYNLMSQGFSPTPCTYGPLLD--GLLKAGRIEDAENLFNEMLEYGCKANCTIYN 1024
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIP 159
L+ + AG + F M + G + S+ ++ C +L D + +
Sbjct: 1025 I-LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL- 1082
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ L PD I+Y LL+ S ++A+ L NEM+ KG+ TY +++ L K G A
Sbjct: 1083 -EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKA 1141
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA +++ E+ K G KP+ +YN L+
Sbjct: 1142 AEAGKMYEELLTK----------------------------------GWKPNVFTYNALI 1167
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPN 306
Y + D A Y + GC PN
Sbjct: 1168 RGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L++ H G E+ + M+ + V+ T+ + L +G A M++ G
Sbjct: 224 LMRGH---GRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 280
Query: 234 VDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ L+ YN V G D E L E+ M G+ P +Y+ LM + K ++
Sbjct: 281 IVLNAYTYNGLVYFLVKSGFDREAL-EVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETV 339
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ +E +G PN ++ I L + FD+AY++ + PD T +L++
Sbjct: 340 LWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQV 399
Query: 352 LVKKKKIKEAKGVIRTIKK 370
L +I +AK V +KK
Sbjct: 400 LCDAGRISDAKDVFWKMKK 418
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 10/270 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + G D A+ F M E +P +VI++N ++ ++ D+ LFD++ K+Y
Sbjct: 40 LIQGLCRKGRIDEALEQFKSMGEECSP-NVITYNTVVNGLCKANRIDEGLELFDDMEKRY 98
Query: 163 NLS----PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
S PD ISY ++ + C + DKA E M G VTY+++++ L K
Sbjct: 99 EASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDR 158
Query: 219 AEEAERLWSEMEKKGVDL-DVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISY 275
+EA L M+ KG D+ A Y + N + G P EL+ M++ G + I +
Sbjct: 159 VDEAYSLL--MQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDF 216
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ KN+ ++A + +E L ++G PN T+ ++ LC +G D+AY++ E V
Sbjct: 217 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVE 276
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
PD T +++G K ++ +A V
Sbjct: 277 SKVTPDVITYSSIIDGFCKAGRMDKADDVF 306
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 156/339 (46%), Gaps = 16/339 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR-------FSDIETLIE-SHKNDPK 93
D+AL+ + S+ + SP Y + V L K+ R F D+E E SH +P
Sbjct: 51 DEALEQFKSMGEE-CSPNVITY--NTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPD 107
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+ +I + +A D A F +M +G +V+++++L+ + D+
Sbjct: 108 VISYS---TVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYS 164
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L ++ K ++ P + Y ++ G + LELL M+ KG + + + +L+ L
Sbjct: 165 LLMQL-KGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHAL 223
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
+K E+A + + + K G +V YNV + G + ++ EM ++ + PD
Sbjct: 224 WKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDV 283
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
I+Y+ ++ +CK MD+A V+ + + C P+ TF T ++ +A++V ++
Sbjct: 284 ITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHED 343
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V IP T +L++ + ++ A + +K+K
Sbjct: 344 MVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 382
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 145/332 (43%), Gaps = 12/332 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + + + +P Y+ + L K R + +L+ K + + + Y
Sbjct: 125 DKAYEYFKRMRAVGCAPNVVTYSS--LIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYN 182
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ + + G + M E G ++I FNA+L A ++ +K F+ + K
Sbjct: 183 AVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKS 242
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++Y + + C +G D+A +L EM V +TY+++++ K G ++
Sbjct: 243 -GKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 301
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYN 276
A+ +++ M + + V G E K + ++M +AG P +YN
Sbjct: 302 ADDVFTRMMVH----ECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM C C + ++ A ++Y ++ P+A T+ I LC + D+A +
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ +P+ LVE L K+ ++ EA V+ +
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEACSVLDNV 449
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 15/230 (6%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y ++ C +G D+A ELL+EM+ +GV++ + ++T++ L ++G +EA + M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMR-----DAGLKPDTISYNFLMTCYCK 284
++ +V YN + + + EL D+M G +PD ISY+ ++ CK
Sbjct: 62 EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ +D+A + ++ + GC+PN T+ + I LC D+AY + + +P
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL-------RAWKKVEEE 386
+V G ++ K E ++ +K+K F N++ WK E+E
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 230
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 114/267 (42%), Gaps = 21/267 (7%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + +AG D A F +M ++F LL + + + + +++
Sbjct: 288 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 347
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P +Y +L+ C + S + ALE+ ++M+ K + TY ++ CL + +E
Sbjct: 348 -GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDE 406
Query: 222 AERLWSEME-------------------KKG-VDLDVAAYNVRITNTYGGDPERLKELID 261
A+ ME K+G VD + + + G+P+ E+I+
Sbjct: 407 AKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIE 466
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M G++PD +Y ++ C + +D A +E + GC+P T+ I C +
Sbjct: 467 QMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 526
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLL 348
D A+++F+ V P T++ L
Sbjct: 527 MADDAFRIFEAMVAAGFTPQAQTMRTL 553
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 42/319 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+++ Q F A+R +M E G +N+L+ ++++ D+ E+ +
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVEN- 519
Query: 163 NLSPDKISYGLLLKSHCDSG---SSDKALE----------------LLNE---------- 193
PD +YG + + ++G S+DK ++ L+NE
Sbjct: 520 GFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEA 579
Query: 194 ------MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
M +G+ TYT ++N L K G +AE ++ EM KG+ DV +Y I
Sbjct: 580 CSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDG 639
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G+ ++ + DEM AGL + I YN L+ +C++ +++AK++ + + G PN
Sbjct: 640 FSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPN 699
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A T+ T I C SG+ +A+++F E + +PD LV+G + ++ A +
Sbjct: 700 AVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759
Query: 367 TIKK-----KFPPNVLRAW 380
T +K P N L W
Sbjct: 760 TNEKGCASSSAPFNALINW 778
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 130/289 (44%), Gaps = 7/289 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ + +D E + + LI + + G A FD+M + G +
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSN 664
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
VI +N LL RS +K L DE+ K P+ ++Y ++ +C SG +A +L
Sbjct: 665 VIIYNMLLGGFCRSGEIEKAKELLDEMSGK-GFPPNAVTYCTIIDGYCKSGDLAEAFQLF 723
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+EM+ KG+ + YTT+++ + + E A ++ E +KG A +N I +
Sbjct: 724 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKF 782
Query: 251 GDPERLKELIDEMRDAGL----KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E ++I+ + D KP+ ++YN ++ CK ++ AK+++ +++ P
Sbjct: 783 GKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPT 842
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
T+ + + G + + VF E + PD +++ +K+
Sbjct: 843 VITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 114/269 (42%), Gaps = 3/269 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G + A FD M G ++ +L+ R + K L EI KK N+ +
Sbjct: 364 GAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEI-KKRNIVISPYT 422
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
YG +K C SG D A ++ EM G V YTT++ ++ +A R+ EM
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
++G+ D YN I + + + + EM + G KPD +Y ++ Y +
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
A K + + E G PN I C G +A F+ V + D T +L+
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLM 602
Query: 350 EGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
GLVK K+ +A+ + ++ K P+V
Sbjct: 603 NGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 14/260 (5%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C +I Y ++G A + FD+M G + L+ C R ++ +F+ K
Sbjct: 704 CTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK 763
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV----TTVTYTTVLNCLYKQ 216
+ + L+ G ++ +++N + + + VTY +++ L K+
Sbjct: 764 --GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKE 821
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTIS 274
GN E A+ L+ M+K + V Y + N Y G + + DE+ AG++PD I
Sbjct: 822 GNLEAAKELFHHMQKANLMPTVITYT-SLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIM 880
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGL-----EENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
Y+ ++ + K M +A + + + ++GC + +T R + G + A KV
Sbjct: 881 YSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 940
Query: 330 FKESVMVHKIPDFNTVKLLV 349
+ V + IPD +TV L+
Sbjct: 941 VENMVRLKYIPDSSTVIELI 960
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 66/296 (22%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPR--SVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI Y + G D A+ F +L S+ N LL A + D LF ++ K
Sbjct: 158 LIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLD----LFWDVYK 213
Query: 161 ---KYNLSPDKISYGLLLKSHCDSGSS---------------------DKALELLNEMEN 196
+ N+ D SY +L+ +HC G+ D+ALEL M
Sbjct: 214 GMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSC 273
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPER 255
KG+ + +Y +++ L KQ E+A+ L EM G+ D AY++ I G + +
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADA 333
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L+ EM G D + Y++ + K M++AK +++G+ G +P A + +
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYAS--- 390
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
L+EG ++K +++ ++ IKK+
Sbjct: 391 --------------------------------LIEGFFREKNVRKGYELLVEIKKR 414
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 119 TFDQMDELGTPRSVISFNALL---FACTRSRLY-DKVPILFDEIPKKYNLSPDKISYGLL 174
T + +E G S FNAL+ F ++ L D + L D K+ P+ ++Y ++
Sbjct: 756 TIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFG-KPNDVTYNIM 814
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C G+ + A EL + M+ + T +TYT++LN K G E ++ E+ G+
Sbjct: 815 IDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGI 874
Query: 235 DLDVAAYNVRITNTY--GGDPERLKELIDEM-----RDAGLKPDTISYNFLMTCYCKNEM 287
+ D Y+V I N + G + L+D+M D G K + L++ + K
Sbjct: 875 EPDNIMYSV-IINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 933
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M+ A+KV E + P+++T I C S N
Sbjct: 934 MEVAEKVVENMVRLKYIPDSSTVIELINESCISSN 968
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 3/253 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G V +FN L+ A + LF+E+ K +PD+++Y +L+ C G
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCTPDEVTYNILIDHLCSMGKLGN 460
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL+LLNEME+ G +TVTY T+++ L K+ EEAE ++ +M+ +G+ +N I
Sbjct: 461 ALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLID 520
Query: 247 NTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ ELI++M GL+P+ I+YN ++T YCK + +A + E + NG
Sbjct: 521 GLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEI 580
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I LC +G A K+ + + P +++ L ++ +++A +
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLF 640
Query: 366 RTIKK-KFPPNVL 377
R + + PP+ L
Sbjct: 641 REMTEVGEPPDAL 653
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 160/363 (44%), Gaps = 45/363 (12%)
Query: 33 SKLRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND 91
+ LR + DP+ AL + S++++ +P S+ Y + V++L + F +E L+ + +
Sbjct: 61 AALREQSDPEAALRMLNSALAREDFAPSSAVYEE--IVQKLGTAGAFDLMEGLVREMRRE 118
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMR-TFDQMDE--LGTPRSVISFNALLFACTRSRLY 148
+ + + + SY + FD A+ +Q+D G + FN LL
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKL 178
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
+ +++E+ + + PD ++ L+K+ C + A+ +L EM + GV T+TT
Sbjct: 179 KLLESVYNEMTGR-GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTT 237
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY------------------- 249
++ ++G+ E A R+ ++M + G NV I N Y
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLI-NGYCKMGRVEDALGYIQQEIAD 296
Query: 250 GGDPERLK------------------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G +P+++ +++D M G PD +YN ++ C KN +DEA
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 356
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K + + + GC P+ TTF T I L ++A + +E + PD T +L+
Sbjct: 357 KGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINA 416
Query: 352 LVK 354
L K
Sbjct: 417 LCK 419
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 3/253 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G +A+ ++M+ G PRS +++N ++ A + ++ +FD++ +
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ- 506
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+S +++ L+ C + D A EL+ +M +G++ +TY ++L KQGN ++A
Sbjct: 507 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKA 566
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M G ++DV Y I G + +L+ MR G++P +YN ++
Sbjct: 567 ADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQS 626
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKIP 340
+ + +A ++ + E G P+A T++ LC G G +A+ E V +P
Sbjct: 627 LFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMP 686
Query: 341 DFNTVKLLVEGLV 353
+F++ ++L EGL+
Sbjct: 687 EFSSFRMLAEGLL 699
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 37/307 (12%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
++ L ++ + ++E + E L++ + + G + A+R +M E G
Sbjct: 204 IKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGC 263
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++ N L+ C R+ D + + EI + PD+++Y + C +G A
Sbjct: 264 SPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGF--EPDQVTYNTFVHGLCQNGHVSHA 321
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L++++ M +G + TY TV+NCL K G + E KG+
Sbjct: 322 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD---------EAKGI------------- 359
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+++M D G PDT ++N L+ ++EA + L G SP+
Sbjct: 360 ------------VNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TF I LC G+ ++F+E PD T +L++ L K+ A ++
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467
Query: 368 IKKKFPP 374
++ P
Sbjct: 468 MESNGCP 474
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +P Y +++ +G+ D L+ EM +G +V V + + + ++A
Sbjct: 84 DFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDA 143
Query: 223 -ERLWSEMEKK--GVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFL 278
+ + ++++ GV D +N + G +L E + +EM G++PD ++ N L
Sbjct: 144 VDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTL 203
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+ + A + E + +G +P+ TTF T + G+ + A +V + +
Sbjct: 204 IKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGC 263
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
P TV +L+ G K ++++A G I+ I F P+
Sbjct: 264 SPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPD 301
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 164/328 (50%), Gaps = 11/328 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLC 101
+AL+++ + + P +Y+ + + K+ RF D +E + PK ++
Sbjct: 388 EALEMFDEMKQKGIVP--EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 445
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
I YG++G A++ ++ M G V++ NA+LF +S +F E+ K
Sbjct: 446 -FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL-KA 503
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD I+Y +++K + D+A+++ +M + ++++ LYK G +E
Sbjct: 504 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 563
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A R++ ++++ ++ YN + G ++KE L++EM + P+ I+YN +
Sbjct: 564 AWRIFYQLKEMNLEPTDGTYNTLLAGL--GREGKVKEVMHLLEEMYHSNYPPNLITYNTI 621
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C CKN +++A + + GC P+ +++ T IY L +++A+ +F + V
Sbjct: 622 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-L 680
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
IPD+ T+ ++ VK +KEA +I+
Sbjct: 681 IPDYATLCTILPSFVKIGLMKEALHIIK 708
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 67 LTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ ++ L + R SD + + + K+D K + Y+ L+ +G G M ++ M
Sbjct: 305 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI-TLLDKFGDNGDSQSVMEIWNAMKA 363
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +V+++ A++ A C R+++ + +FDE+ +K + P++ SY L+ +
Sbjct: 364 DGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQK-GIVPEQYSYNSLISGFLKADRF 421
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-V 243
ALEL M+ G + T+ +N K G + +A + + M+ KG+ DV A N V
Sbjct: 422 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 481
Query: 244 RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G K + E++ G+ PDTI+Y ++ C K DEA K++ + EN C
Sbjct: 482 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 541
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ + I L +G D+A+++F + ++ P T L+ GL ++ K+KE
Sbjct: 542 VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 601
Query: 364 VIRTI-KKKFPPNVL 377
++ + +PPN++
Sbjct: 602 LLEEMYHSNYPPNLI 616
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 54/343 (15%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI------ESH 88
++S FD + AL++Y + P Y +V +A KR D+ET++ E+H
Sbjct: 206 VKSGFDRE-ALEVYRVMMVDGVVPSVRTY----SVLMVAFGKR-RDVETVLWLLREMEAH 259
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
P + +C IR GQA FD A R +M+ G
Sbjct: 260 GVKPNVYSYT-IC--IRVLGQAKRFDEAYRILAKMENEGC-------------------- 296
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
PD I++ +L++ CD+G A ++ +M+ + VTY T
Sbjct: 297 ----------------KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 340
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDA 266
+L+ G+++ +W+ M+ G + +V AY I G E L E+ DEM+
Sbjct: 341 LLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQK 399
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G+ P+ SYN L++ + K + +A ++++ ++ +G PN T +I + SG KA
Sbjct: 400 GIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 459
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ ++ +PD ++ GL K ++ AK V +K
Sbjct: 460 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 502
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 5/285 (1%)
Query: 94 ITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV- 151
I E Y N LI + +A F A+ F MD G + + +LF + + +
Sbjct: 401 IVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN--GYTHVLFINYYGKSGESIK 458
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
I E+ K + PD ++ +L SG A + +E++ GV T+TYT ++
Sbjct: 459 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 518
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
C K +EA +++ +M + DV A N I Y G + + ++++ L+P
Sbjct: 519 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 578
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+YN L+ + + E + E + + PN T+ T + LC +G + A +
Sbjct: 579 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 638
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
IPD ++ ++ GLVK+++ EA + +KK P+
Sbjct: 639 YSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 683
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 85/409 (20%), Positives = 158/409 (38%), Gaps = 42/409 (10%)
Query: 5 RHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
R + C + GS ++ + VS S S P K + V P R A
Sbjct: 35 RMLEVCCCSGVLGGSPPSSRTAGVS---SPGLSPSRPSKRRIGRARVQPRAPPPCDERRA 91
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN----LIRSYGQAG----MFDHA 116
+ + L + ++ S P++ CN L+R +G+ G +FD
Sbjct: 92 AEDVIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDVM 151
Query: 117 MR--------TFDQ--------------------MDELGTPRSVISFNALLFACTRSRLY 148
R TF M E G + ++N L++ +S +
Sbjct: 152 QRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG-F 210
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D+ + + + P +Y +L+ + + L LL EME GV+ +YT
Sbjct: 211 DREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 270
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAG 267
+ L + +EA R+ ++ME +G DV + V I G K++ +M+ +
Sbjct: 271 CIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 330
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
KPD ++Y L+ + N +++ ++ +G + N + I LC G +A
Sbjct: 331 QKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 390
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PN 375
++F E +P+ + L+ G +K + +A + + + P PN
Sbjct: 391 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 439
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 135/295 (45%), Gaps = 10/295 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ ALD+ S++ P S Y + + L K +R+++ ++ K I LC
Sbjct: 632 NDALDMLYSMTTKGCIPDLSSY--NTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLC 688
Query: 102 NLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++ S+ + G+ A+ D + G+ S ++L+ + +K I F EI
Sbjct: 689 TILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK-SIEFAEIIA 747
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ D L+K C + +A EL+ + ++ GV + T Y +++ L + +
Sbjct: 748 SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLID 807
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNF 277
AE L++EM++ G D YN+ + G R++E++ +EM G + ++YN
Sbjct: 808 IAEGLFAEMKELGCGPDEFTYNLLLDAM--GKSMRIEEMLKVQEEMHRKGYESTYVTYNT 865
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+++ K+ +++A +Y L G SP T+ + L +G + A +F E
Sbjct: 866 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 920
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 14/260 (5%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD--EIPKKYNLSP---- 166
++ A F QM ++ P + L CT + K+ ++ + I K Y L P
Sbjct: 666 YNEAFSIFCQMKKVLIP----DYATL---CTILPSFVKIGLMKEALHIIKDYFLQPGSKT 718
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D+ S L++ +K++E + + G+ + ++ L KQ A EA L
Sbjct: 719 DRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELV 778
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ + GV L YN I + + E L EM++ G PD +YN L+ K+
Sbjct: 779 KKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKS 838
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
++E KV E + G T+ T I L S ++A ++ + P T
Sbjct: 839 MRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTY 898
Query: 346 KLLVEGLVKKKKIKEAKGVI 365
L++GL+K +I++A+ +
Sbjct: 899 GPLLDGLLKAGRIEDAENLF 918
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 5/194 (2%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + +S Y L+ D D A L EM+ G TY +L+ + K
Sbjct: 782 KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRI 841
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYN 276
EE ++ EM +KG + YN I+ RL++ ID + G P +Y
Sbjct: 842 EEMLKVQEEMHRKGYESTYVTYNTIISGLV--KSRRLEQAIDLYYNLMSQGFSPTPCTYG 899
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ K +++A+ ++ + E GC N T + + +GN +K +F++ V
Sbjct: 900 PLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 959
Query: 337 HKIPDFNTVKLLVE 350
PD + ++++
Sbjct: 960 GINPDIKSYTIIID 973
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G++ + ++ ++M G + +++N ++ +SR ++ L+ + +
Sbjct: 831 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ- 889
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP +YG LL +G + A L NEM G + Y +LN GN E+
Sbjct: 890 GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 949
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI 245
L+ +M +G++ D+ +Y + I
Sbjct: 950 CHLFQDMVDQGINPDIKSYTIII 972
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 139/286 (48%), Gaps = 11/286 (3%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y + A+ DQM G + ++FN L+
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + K PD ++YG+++ C G +D A LLN+ME +E + YTT+
Sbjct: 204 EAVALIDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYG--GDPERLKELIDEMRD 265
++ L K + ++A L+ EME KG+ +V Y+ I+ YG D R L+ +M +
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR---LLSDMIE 319
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
+ PD +++ L+ + K + EA+K+Y+ + + P+ T+ + I C D+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
A ++F+ V H PD + L++G K K++ E + R + ++
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 136/278 (48%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + +QM LG P + +++ L+ C RS+L + +L +
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ ++ LL +C S +A+ L+++M G + TVT+ T+++ L+ A E
Sbjct: 147 Y--EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M KG D+ Y V + GD + L+++M L+P + Y ++
Sbjct: 205 AVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIID 264
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN+ MD+A +++ +E G PN T+ + I LC G + A ++ + + P
Sbjct: 265 GLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
D T L++ VK+ K+ EA+ + +K+ P+++
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 145/294 (49%), Gaps = 8/294 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-L 100
D AL+++ + P Y+ ++ L R+SD L+ S + KI + +
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISC--LCNYGRWSDASRLL-SDMIERKINPDVFTF 329
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
LI ++ + G A + +D+M + S++++++L+ C RL D+ +F+ +
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFMV 388
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ PD +SY L+K C + D+ +EL EM +G+ TVTYTT++ L++ G+
Sbjct: 389 SKHCF-PDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDC 447
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A+ ++ EM GV ++ YN + G E+ + + ++ + ++P +YN +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ CK +++ ++ L G P+ + T I C G+ ++A +FKE
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 8/303 (2%)
Query: 72 LAKSKRFSDIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L K+K D L +E+ P + L + + +YG+ + A R M E
Sbjct: 266 LCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR---WSDASRLLSDMIERKI 322
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V +F+AL+ A + + L+DE+ K+ ++ P ++Y L+ C D+A
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
++ M +K V+Y+T++ K +E L+ EM ++G+ + Y I
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ GD + +E+ EM G+ P+ ++YN L+ CKN +++A V+E L+ + P
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I +C +G + + +F + PD ++ G +K +EA + +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 368 IKK 370
+K+
Sbjct: 562 MKE 564
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 7/233 (3%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D LF E+ K P I + LL + D + L +M+N G+ TY+
Sbjct: 63 DDAVALFGEMVKSRPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRD 265
++NC ++ A + +M K G + ++ + + N Y +R+ E L+D+M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS-SLLNGY-CHSKRISEAVALVDQMFV 179
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +P+T+++N L+ + EA + + + GC P+ T+ + LC G+ D
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
A+ + + P +++GL K K + +A + + ++ K PNV+
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVV 292
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 135/256 (52%), Gaps = 5/256 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y +AG+ A+ F++M++ G I+F+ ++ +R R + FD + ++
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF 251
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I Y L++ C +G +A ++ EM+ G+E TY+ V++ L + G A
Sbjct: 252 --EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++++M G + +N +R+ + G E++ ++ ++M+ G +PDTI+YNFL+
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRV-HVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C++E ++ A KV + + C NA+TF T ++ + + A++++ + + P
Sbjct: 369 AHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 341 DFNTVKLLVEGLVKKK 356
+ T +L+ V K
Sbjct: 429 NTVTYNILMRMFVGSK 444
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 161/321 (50%), Gaps = 16/321 (4%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHA 116
V + A + + L++ +R S+ ++ +S K+ +P + NL+R + +AG A
Sbjct: 218 VPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVI---VYTNLVRGWCRAGEISEA 274
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTR----SRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ F +M G +V +++ ++ A R SR +D + D +P+ I++
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS-----GCAPNAITFN 329
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L++ H +G ++K L++ N+M+ G E T+TY ++ + N E A ++ + M KK
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Query: 233 GVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+++ + +N D + +M +A +P+T++YN LM + ++ D
Sbjct: 390 KCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVE 350
K+ + +++ PN T+R + CG G+++ AYK+FKE V + P + ++++
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 351 GLVKKKKIKEAKGVIRTIKKK 371
L + ++K+ + ++ + +K
Sbjct: 510 QLRRAGQLKKHEELVEKMIQK 530
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 117/238 (49%), Gaps = 3/238 (1%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N ++ + R +D L D + K N+ ++ +L++ + +G + +A+ N M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLID-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDP 253
E+ G + ++ V++ L ++ A EA+ + + K + DV Y N+ G+
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEI 271
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+++ EM+ AG++P+ +Y+ ++ C+ + A V+ + ++GC+PNA TF
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNL 331
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ +G +K +V+ + + PD T L+E + + ++ A V+ T+ KK
Sbjct: 332 MRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 8/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ G+ D A+R ++ +L P + + N +L R+R V LFD +P
Sbjct: 140 LLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP--- 196
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ +++ C G +A L M+ G VTY ++++ K G+ EE
Sbjct: 197 --VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEV 254
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E+L SEM K G DV YN I N + G E+ EM+ G+ + ++++ +
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALI-NCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVD 313
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK ++ EA K++ + G PN T+ + + C +G D A + E V +P
Sbjct: 314 AFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 373
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ T ++V+GL K+ K+ EA V+ +++
Sbjct: 374 NVVTYTVMVDGLCKEGKVAEADNVLSLMER 403
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 21/285 (7%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G + A F +M G +V++F+ + A + L + LF ++ +
Sbjct: 276 LINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM-RVR 334
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P++ +Y L+ C +G D A+ LL+EM ++G+ VTYT +++ L K+G EA
Sbjct: 335 GMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEA 394
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + S ME+ GV + Y I + + ER +L+++M++ G++ D Y L+
Sbjct: 395 DNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWG 454
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES---VMVHK 338
CK++ +DEAK + + G PN + T + D +K KES ++HK
Sbjct: 455 LCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIM---------DALFKAGKESEAVALLHK 505
Query: 339 I------PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
I P+ T L++GL K I EA +++ PNV
Sbjct: 506 ILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNV 550
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+ ++ + G+ AM+ F QM G + ++ +L+ ++ D +L DE+ +
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ- 369
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++Y +++ C G +A +L+ ME GV+ + YTT+++ + N+E A
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERA 429
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
L ++M+ KG++LDV+ Y I + K L+ +M GL+P+T+ Y +M
Sbjct: 430 LDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDA 489
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K EA + + ++G PN T+ I LC +G+ +A F + + P+
Sbjct: 490 LFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPN 549
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
L++G K + +A ++ + K
Sbjct: 550 VQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 39/301 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L+ +AG D A+ D+M G +V+++ ++ C ++ + +L + +
Sbjct: 345 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVL--SLME 402
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV------------------- 201
+ + +++ Y L+ H + +S++AL+LLN+M+NKG+E+
Sbjct: 403 RGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVD 462
Query: 202 ----------------TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
TV YTT+++ L+K G EA L ++ G +V Y I
Sbjct: 463 EAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALI 522
Query: 246 TNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G ++MR+ GL P+ +Y L+ +CK +++A + + + G S
Sbjct: 523 DGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMS 582
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ + + I N A+ + + + D + G ++EA+GV
Sbjct: 583 LDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGV 642
Query: 365 I 365
+
Sbjct: 643 L 643
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG A+ ++ + G +V+++ AL+ ++ + F+++ ++ L P+
Sbjct: 492 KAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKM-RELGLDPNV 550
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y L+ C GS +KA+ L+NEM +KG+ + V YT++++ KQ N ++A L ++
Sbjct: 551 QAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTK 610
Query: 229 MEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M + G+ LD+ Y I+ + + + ++ EM G+ PD YN L+ Y K
Sbjct: 611 MIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGN 670
Query: 288 MDEAKKVYEGLE 299
M+EA + +E
Sbjct: 671 MEEASSLQNEME 682
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 109/249 (43%), Gaps = 2/249 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A+ +QM G V + L++ + + D+ L ++ L P+ + Y
Sbjct: 427 ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAG-CGLRPNTVIYTT 485
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ + +G +A+ LL+++ + G + VTY +++ L K G+ EA +++M + G
Sbjct: 486 IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELG 545
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+D +V AY I G + L++EM D G+ D + Y L+ Y K + +A
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + E+G + + +I C +A V E + PD L+
Sbjct: 606 ALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKY 665
Query: 353 VKKKKIKEA 361
K ++EA
Sbjct: 666 QKLGNMEEA 674
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
P+ ++Y L+ C +GS +A+ N+M G++ YT +++ K G+ +A
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L +EM KG+ LD Y I + + L +M ++GL+ D Y ++ +
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
C MM EA+ V + G +P+ T + I GN ++A + E
Sbjct: 631 CNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNE 680
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN---VRIT-NTYGGDPERLKELIDEM 263
T+L+ L G ++A R + + + V + N +R+ N GG RL +L+
Sbjct: 139 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP-- 196
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI--YHLCG 319
P+ ++N ++ CK + EA+ ++ ++ GCSP+ T+ + I Y CG
Sbjct: 197 -----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 249
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 141/269 (52%), Gaps = 5/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + AG D AM D + +G +V+++ AL+ A R++ ++ L +E+ ++
Sbjct: 31 IITAMANAGDLDGAM---DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEM-RER 86
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++Y +L+ + C A +++ +M G +T+ ++++ K+GN ++A
Sbjct: 87 GCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDA 146
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L M KG+ +V Y+ I KE+++EM+ +G+ PD +Y+ L+
Sbjct: 147 RKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHG 206
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + ++EA+++ + +GC+P+ + + I+ C SG +A K +E K PD
Sbjct: 207 LCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 266
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +++GL K KI EA+ ++ +++
Sbjct: 267 VVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ F A ++M G +++AL+ ++ ++ + +
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS- 226
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD + Y ++ + C SG +A + L EM + VTY TV++ L K G EA
Sbjct: 227 GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA 286
Query: 223 ERLWSEMEKKGVDL-DVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
+ + +M++ G L DV Y+ I D ++L+D M AG PD ++Y ++
Sbjct: 287 QVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 346
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK ++EA+ + +G++ GC+PN T+ T I LC + D+A +V +E P
Sbjct: 347 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 406
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ T +V GL +IKEA+ +++ +K
Sbjct: 407 NLVTYNTMVNGLCVSGRIKEAQQLVQRMK 435
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 8/280 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + M A +M E G +V++FN+L+ C R + D +L + K
Sbjct: 98 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK- 156
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y L+ C S +A E+L EM+ GV TY+ +++ L K EE
Sbjct: 157 -GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEE 215
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE++ M G DV Y+ I + + G ++ + EMR PD ++YN ++
Sbjct: 216 AEQMLRRMAGSGCTPDVVVYS-SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 274
Query: 280 TCYCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
CK + EA+ + + ++E+G P+ T+ T I LC S +A K+
Sbjct: 275 DGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGC 334
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD T +++GL K +++EA+ +++ +K+ PNV+
Sbjct: 335 NPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 374
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I ++ ++G A +T +M + V+++N ++ + + ++ D++ +
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ PD ++Y ++ C S +A +LL+ M G VTYTT+++ L K G EE
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE L M++ G +V Y I+ + + +++EMR+AG P+ ++YN ++
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416
Query: 281 CYCKNEMMDEAKKVYEGLEEN--GCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
C + + EA+++ + +++ CSP+A T+RT + L S +A ++ ++
Sbjct: 417 GLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQ 470
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 4/192 (2%)
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C++G ALELL EM++ G T+T ++ + G+ + A + G D +V
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y I E +L++EMR+ G P+ ++YN L+ CK M+ A+ V +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ E G +PN TF + + C GN D A K+ V P+ T L++GL K +K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 358 IKEAKGVIRTIK 369
EAK V+ +K
Sbjct: 178 FLEAKEVLEEMK 189
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 13/218 (5%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L +E+ K +PD ++ ++ + ++G D A++ L M G + VTYT ++
Sbjct: 12 LLEEM-KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAF 67
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-----TNTYGGDPERLKELIDEMRDAGL 268
+ EEA +L EM ++G ++ YNV + + G + +K++I+ G
Sbjct: 68 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE----GGF 123
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ +++N L+ +CK +D+A+K+ + G PN T+ I LC S F +A +
Sbjct: 124 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 183
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
V +E PD T L+ GL K KI+EA+ ++R
Sbjct: 184 VLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR 221
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G + A M G +V+++ L+ ++R D+ + +E+ +
Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM-RNA 402
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNAE 220
P+ ++Y ++ C SG +A +L+ M++ E + TY T++N L +
Sbjct: 403 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQ 462
Query: 221 EAERLWSEM 229
EAE+L +M
Sbjct: 463 EAEQLLEQM 471
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 146/308 (47%), Gaps = 3/308 (0%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDH 115
+S V +R + + L K++ D + E + LI + +A D
Sbjct: 172 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 231
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + D M G + +++ +++ + + ++ + ++ ++ P + LL
Sbjct: 232 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM-RERGCEPGLFIFTSLL 290
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ G +++A ++L EM +G + YT++++ L+ G EA ++ M +KG
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D Y I N + G+ E E+++ M +G+ PD +YN LM Y K E +D+A V
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 410
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLV 353
Y+ + +G PNA TF ++ L G D+A+ +FKE + ++ P + +L++GL
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLG 470
Query: 354 KKKKIKEA 361
K ++ EA
Sbjct: 471 KAGRVSEA 478
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 159/356 (44%), Gaps = 20/356 (5%)
Query: 39 FDPDKALDIYSSVSKHY--ASPVSSRYAQDLT-------------VRRLAKSKRFSDIET 83
F PD L Y+SV Y A + + Y + +T ++ LA SKR +
Sbjct: 72 FRPDVFL--YTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACE 129
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
L E K +I +AG + ++ F++M + ++ ++
Sbjct: 130 LFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLC 189
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
++++ +F+++ +K PD I+Y L+ + D+A +LL+ M KG E T
Sbjct: 190 KAQMLPDACKVFEQMVQK-GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 248
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDE 262
VTY ++++ K EA+ + ++M ++G + + + ++ G E +++ E
Sbjct: 249 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 308
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M G PD I Y L+ + EA+ V++ + E GC+P+A T+ T I + GN
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ A ++ + PD L++G VK +++ +A GV R + PN +
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAV 424
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 5/215 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+++ + G + A + M + G ++N+L+ + D+ ++D +
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 417
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ +++ +L+ G +D+A L EM E + V T V+YT +++ L K G
Sbjct: 418 -GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVS 476
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA + EM +G+ + Y I + G PE K+L+++M G+ PD +Y+ L
Sbjct: 477 EAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA-KKLVEDMVKLGVNPDVQAYSAL 535
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+T + M+D A V++ + + GC+PN T++
Sbjct: 536 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 10/251 (3%)
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
+G +++S+N ++ D+ F+ + PD I++ L+ C +G
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQ 59
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+LLN+ + YT+V++ K G+ + + LDV +Y I
Sbjct: 60 VGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVI 115
Query: 246 TNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
D +R+ E L +E++ AG P+ ++Y ++ K +++ K +E + +
Sbjct: 116 KGL--ADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C P TT+ I LC + A KVF++ V +PD T L++G K K+ EA+
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233
Query: 363 GVIRTIKKKFP 373
++ + K P
Sbjct: 234 KLLDVMLTKGP 244
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ Y G + A + +M G VI + +L+ + + +FD + +K
Sbjct: 288 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 347
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD ++YG ++++ G+ + A E+L M GV Y ++++ K ++
Sbjct: 348 -GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 406
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRD-AGLKPDTISYNFLM 279
A ++ M G+ + +NV + + G +R L EM + + P +SY L+
Sbjct: 407 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K + EA ++ + + G P T+ + IY L +G +A K+ ++ V +
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
PD L+ GL+ + A V + +K+ PN
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 563
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 10/265 (3%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P + L +L+ S G+ A FD M E G +++ ++ ++ +
Sbjct: 316 PDVILYTSLIDLLFSTGRV---PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 372
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ E+ K + PD +Y L+ + D+A + + M G++ VT+ +++
Sbjct: 373 GEIL-ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMH 431
Query: 212 CLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAG 267
L+K G + A L+ EM EK+ V + +Y + I G R+ E EM D G
Sbjct: 432 GLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL--GKAGRVSEAFLQFQEMIDRG 489
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
+ P+ +Y L+ K + EAKK+ E + + G +P+ + I L S D A+
Sbjct: 490 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 549
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGL 352
VF+E + P+ T K+L G
Sbjct: 550 DVFQEMMKRGCAPNEVTYKVLRRGF 574
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+ FS + ++E + P + L I G+AG A F +M + G ++
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTIL---IDGLGKAGRVSEAFLQFQEMIDRGIIPECHTY 497
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
+L+++ ++ + L +++ K ++PD +Y L+ DS D A ++ EM
Sbjct: 498 TSLIYSLAKAGRIPEAKKLVEDM-VKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 556
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+G VTY + G A + E
Sbjct: 557 KRGCAPNEVTYKVLRRGFRAAGRALDLE 584
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 177/358 (49%), Gaps = 25/358 (6%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIETL 84
IS A + ++ E DP +AL+I++ V++ S ++ YA L +LAKSK+F I+ +
Sbjct: 128 ISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATIL--HKLAKSKKFQAIDAV 185
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD----ELGTPRSVISFNALLF 140
+ + E NL++ + + + + + FD + E + +++ + LL
Sbjct: 186 LHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCLNLLV 245
Query: 141 ACTRSRL------YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+S + D + +E+ K + P+ I+Y L+ C SG +A+EL EM
Sbjct: 246 ESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM 305
Query: 195 ENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--G 251
+K + +TY ++N + A ++ M+K G + +V Y+ + N + G
Sbjct: 306 VSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSA-LMNGFCKEG 364
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E KE+ DEM+ GLKPDT+ Y L+ +C+ +DEA ++ + + EN C + TF
Sbjct: 365 RLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFN 424
Query: 312 TWIYHLCGSGNFDKAYKVFK----ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ LC G F++A + + E V ++K + ++++ L ++ ++++A ++
Sbjct: 425 VILGGLCREGRFEEAXGMLERLPYEGVYLNKA----SYRIVLNSLCREGELQKATQLV 478
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 45/299 (15%)
Query: 40 DPDKALDIYSSVSK-HYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP 98
D D A ++ + K H + P Y+ + L S R + L E + +I +
Sbjct: 258 DIDSAFEVVEEMKKSHVSYPNLITYST--LINGLCGSGRLKEAIELFEEMVSKDQILPDA 315
Query: 99 YLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
N LI + D A++ + M + G +V +++AL+ C RL ++ +FD
Sbjct: 316 LTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRL-EEAKEVFD 374
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENK------------------ 197
E+ K L PD + Y L+ C +G D+A+ELL +M ENK
Sbjct: 375 EM-KSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCRE 433
Query: 198 ----------------GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
GV + +Y VLN L ++G ++A +L M +GV A
Sbjct: 434 GRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATS 493
Query: 242 NVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N + + G + + L+ + + G KP+ S+ L+ C+ + A ++ + L
Sbjct: 494 NELLVHLCEAGKVGDAVMALLG-LLELGFKPEPNSWALLVELICRERKLLPAFELLDDL 551
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 186 KALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME------KKGVDLDV 238
+ALE+ N + E +G TY T+L+ L K + + + +M +G+ L++
Sbjct: 145 RALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNL 204
Query: 239 AAYNVRITNTYGGDPERLKELIDEMRDA---------GLKPDTISYNFLM-----TCYCK 284
+ +++ L E + EM DA LK + N L+ + K
Sbjct: 205 MKHFSKLS---------LHERVVEMFDAIXPIVREKPSLKAISTCLNLLVESNQSSITAK 255
Query: 285 NEMMDEAKKVYEGLEENGCS-PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDF 342
N +D A +V E ++++ S PN T+ T I LCGSG +A ++F+E V +I PD
Sbjct: 256 NGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDA 315
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T L+ G K+ A ++ +KK PNV
Sbjct: 316 LTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVF 351
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 147/341 (43%), Gaps = 50/341 (14%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L K +F + E L I ++I + + D A R F M G
Sbjct: 325 INALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGC 384
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
VI+F+ L+ C R+ D + +L + + L + I+Y L+ C G+ + A
Sbjct: 385 SPDVITFSILIDGYCGAKRVDDGMKLLHEM--SRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD---------- 237
L+LL EM + GV VT T+L+ L G ++A ++ M+K +DLD
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Query: 238 -VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
V YN+ I G +EL +EM GL PDTI+YN ++ CK +DEA +++
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMF 562
Query: 296 EGLEENGCSP-----------------------------------NATTFRTWIYHLCGS 320
+ + G SP NA T+RT I+ C
Sbjct: 563 DSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQV 622
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GN + A +F+E + PD T++ ++ GL K+++K A
Sbjct: 623 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 8/221 (3%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF E+ +K +SP+ +Y ++ C SG +A LL EM + + VT++ ++N L
Sbjct: 270 LFSEMQEK-GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD----PERLKELIDEMRDAGLK 269
K+G EAE L++EM +G+ + YN I + ER+ L M G
Sbjct: 329 VKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL---MATKGCS 385
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PD I+++ L+ YC + +D+ K+ + G N T+ T I+ C GN + A +
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+E + P+ T L++GL K+K+A + + ++K
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 182/412 (44%), Gaps = 40/412 (9%)
Query: 3 SLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDP----DKALDIYSSVSKHYASP 58
S+RH T A SS A + KL+S F D A+D++ + + P
Sbjct: 24 SIRH-------TLAKKSSGKAGGFG--GERLKLQSGFHEIKGLDDAIDLFGYMVRSRPLP 74
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN------LIRSYGQAGM 112
+ + L V R + +I H+ K+ CN LI+ +
Sbjct: 75 CVIDFCKLLGV-----VVRMERPDVVISLHR---KMEMRRIPCNIYSFTILIKCFCSCSK 126
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
A+ TF ++ +LG S+++F+ LL C R+ + + F +I K P+ I++
Sbjct: 127 LPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALH-FFHQICK-----PNVIAF 180
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C G +A+ LL+ M G++ +TY T+++ + K G+ A L +ME+
Sbjct: 181 TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 240
Query: 232 KG-VDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+ +V Y+ I + G + L EM++ G+ P+ +YN ++ +C +
Sbjct: 241 VSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWS 300
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA+++ + E SP+ TF I L G F +A +++ E + IP+ T ++
Sbjct: 301 EAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMI 360
Query: 350 EGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELGLVPAPAVGDGQK 400
+G K+ ++ A+ + + K P+V+ ++ G A V DG K
Sbjct: 361 DGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID---GYCGAKRVDDGMK 409
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 147/334 (44%), Gaps = 58/334 (17%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A F +M E G ++ ++N ++ C+ R + +L + +K +SPD +++ +L
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK--MSPDVVTFSVL 324
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ + G +A EL NEM +G+ T+TY ++++ KQ + AER++ M KG
Sbjct: 325 INALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGC 384
Query: 235 DLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
DV +++ I G +R+ + L+ EM GL +TI+Y L+ +C+ ++ A
Sbjct: 385 SPDVITFSILIDGYCGA--KRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK-------------------- 331
+ + + +G PN T T + LC +G A ++FK
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Query: 332 ---------------------ESV---MVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
E + M H+ +PD T +++GL K+ ++ EA +
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMF 562
Query: 366 RTI-KKKFPPNVLRAWKKVEEELGLVPAPAVGDG 398
++ K F P+V+ + G VGDG
Sbjct: 563 DSMGSKGFSPDVVTFTTLIN---GYCKVGRVGDG 593
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ + FD+M G SV SF AL+ A R+ Y L D + KK
Sbjct: 152 MIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRM-KKE 210
Query: 163 NLSPDKISYGLLLKSHCDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP ++Y ++ S C G D + L L +M ++G++ VTY T+L+ ++G +
Sbjct: 211 RVSPSILTYNTVINS-CARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGD 269
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
EAE ++ M + G+ D+ Y+ + T+G E++ EL+ EM G PD SYN L
Sbjct: 270 EAEMVFRTMNEGGILPDITTYSY-LVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVL 328
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + ++ + EA V+ ++ GC PNA T+ + G +D +F E + +
Sbjct: 329 LEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNT 388
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
P+ T +L+ + KE + +++ PN+
Sbjct: 389 EPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNM 427
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G +K E+ +EM + GV + ++T ++N
Sbjct: 132 LFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAY 191
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPD 271
+ G + + L M+K+ V + YN I + G D E L L +MR G++ D
Sbjct: 192 GRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQAD 251
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L++ + + DEA+ V+ + E G P+ TT+ + +K ++ K
Sbjct: 252 IVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLK 311
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
E PD + +L+E + IKEA GV R ++
Sbjct: 312 EMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQ 349
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 111/229 (48%), Gaps = 6/229 (2%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I S + G+ ++ + F QM G ++++N LL AC R L D+ ++F + +
Sbjct: 222 VINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEG 281
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y L+++ +K ELL EME+ G +Y +L + G+ +E
Sbjct: 282 -GILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKE 340
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A ++ +M+ G + A Y++ + N YG G + +++L EM+ + +P+ +YN L+
Sbjct: 341 AMGVFRQMQGAGCVPNAATYSI-LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILI 399
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+ + E ++ + E PN T+ I+ CG G + K
Sbjct: 400 NVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA-CGKGGLHEDAK 447
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 14/308 (4%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L + ++ S++ +ES + P IT L + ++ Q+G AM F QM G
Sbjct: 296 TFGKLNRLEKVSELLKEMESGGSFPDITSYNVL---LEAHAQSGSIKEAMGVFRQMQGAG 352
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +++ LL R YD V LF E+ K N P+ +Y +L+ + G +
Sbjct: 353 CVPNAATYSILLNLYGRHGRYDDVRDLFLEM-KVSNTEPNAATYNILINVFGEGGYFKEV 411
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L ++M + VE TY ++ K G E+A+++ M +KGV AY +
Sbjct: 412 VTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAY-TGVIE 470
Query: 248 TYGGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YG + L+ + M + G KP +YN L+ + K + E++ + + ++G +
Sbjct: 471 AYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVAR 530
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE-----GLVKKKKIKE 360
N TF I G F++A K + E PD T++ ++ GLV++ +E
Sbjct: 531 NRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEES--EE 588
Query: 361 AKGVIRTI 368
G I+ +
Sbjct: 589 QFGEIKAL 596
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 123/265 (46%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G+ D A F M+E G + +++ L+ + +KV L E+
Sbjct: 258 LLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGG 317
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +LL++H SGS +A+ + +M+ G TY+ +LN + G ++
Sbjct: 318 SF-PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDV 376
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM+ + + A YN+ I N +G G + + L +M + ++P+ +Y L+
Sbjct: 377 RDLFLEMKVSNTEPNAATYNILI-NVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIF 435
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K + ++AKK+ + E G P++ + I + +++A F V P
Sbjct: 436 ACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKP 495
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
T L++ K KE++ ++
Sbjct: 496 TVETYNSLIQMFAKGGLYKESEAIL 520
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 133/304 (43%), Gaps = 5/304 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+ ++ + P ++ Y+ + + + R+ D+ L K
Sbjct: 340 EAMGVFRQMQGAGCVPNAATYS--ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNI 397
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G+ G F + F M E ++ ++ L+FAC + L++ + + +K
Sbjct: 398 LINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEK- 456
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +Y +++++ + ++AL N M G + T TY +++ K G +E+
Sbjct: 457 GVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKES 516
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E + +M + GV + +N I GG E + EM A PD + +++
Sbjct: 517 EAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSV 576
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC +++E+++ + ++ G P+ + + + +D A+++ E + +++ +
Sbjct: 577 YCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDE-MFTNRVSN 635
Query: 342 FNTV 345
+ V
Sbjct: 636 IHQV 639
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 132/339 (38%), Gaps = 42/339 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH-KNDPKITQEPYL 100
D D++ + P ++ Y ++ + + F ++ TL + + + E Y
Sbjct: 374 DDVRDLFLEMKVSNTEPNAATY--NILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYE 431
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI + G+ G+ + A + M+E G S ++ ++ A ++ LY++ + F+ +
Sbjct: 432 -GLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTM-N 489
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P +Y L++ G ++ +L +M GV T+ V+ + G E
Sbjct: 490 EVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFE 549
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA + + EMEK D D ++ + G E +E E++ G+ P + Y ++
Sbjct: 550 EAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMML 609
Query: 280 TCYCKNEMMDEAKK------------------------------------VYEGLEENGC 303
Y K + D+A + V+E L+ GC
Sbjct: 610 AVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGC 669
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
S + T + L G ++A +V E+ P+
Sbjct: 670 SLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPEL 708
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 12/269 (4%)
Query: 108 GQAGMFD--HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
G GM D AM F++M + G +V+++N L+ R Y F + K+ N
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVE-NLKRGYLNNATRFLYMMKESNCE 474
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD+ +Y L+ C G D A EM G+ TYT +++ K+G + A L
Sbjct: 475 PDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCY 282
+ ME+ G + YN I+ G+ R E +M + GL+P+TI+Y L+
Sbjct: 535 FERMEENGCSASIETYNAIISGLSKGN--RFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CKN + A K++ +E+ C PNA T+ + IY LC G D A ++ + P
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCE----PTI 648
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+T LV GL ++ + EA ++ +K+K
Sbjct: 649 DTYSTLVSGLCREGRSNEASQLVENMKEK 677
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 9/290 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
L+ G+ M A + Q+ G S+++FN ++ C + ++ + V ++F++I +
Sbjct: 168 LLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV-LVFNKI-FQ 225
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++L PD +Y L+ HC + DKA E+ + M G +VTY+T++N L +G E
Sbjct: 226 FDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGE 285
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLK---PDTISYNFL 278
A + EM +KG++ V Y V I++ D R+ + I+ +R G K P +Y +
Sbjct: 286 AMDMLEEMTEKGIEPTVYTYTVPISSL--CDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ + M+ A +Y + + G PN T+ I LC G F A K+F
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNVLRAWKKVEEEL 387
+ + T +++GL I++A V + K P P V+ + E L
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENL 453
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G A+ F+++ + ++ +L+ R+R DK +FD + K
Sbjct: 203 MINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKD- 261
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ ++Y L+ C+ G +A+++L EM KG+E T TYT ++ L G ++A
Sbjct: 262 GCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDA 321
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M KKG V Y I+ + G E + +M GL P+T++YN L+
Sbjct: 322 INLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINE 381
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C A K+++ +E +G NA T+ I L G + +KA VF + + P
Sbjct: 382 LCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPT 441
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T L+ +K+ + A + +K+
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKE 470
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 126/254 (49%), Gaps = 6/254 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y + G D A+ F++M+E G S+ ++NA++ ++ + + ++ ++
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ- 576
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ I+Y L+ C + +++ A ++ +EME K TYT+++ L ++G + A
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA 636
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
ERL + G + + Y+ ++ G +L++ M++ GL P Y L+
Sbjct: 637 ERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVA 692
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK+ +D A +++ + G P+ ++ I LCG ++A +F+ + D
Sbjct: 693 HCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSD 752
Query: 342 FNTVKLLVEGLVKK 355
+LV+GL+++
Sbjct: 753 LIVWTVLVDGLLQE 766
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 161/370 (43%), Gaps = 6/370 (1%)
Query: 18 GSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
G T A++ + ++ L D +KA+ +++ + K SP Y L V L +
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTY-NTLIVENLKRGYL 458
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+ L +++ + + Y C LI + + G D A F +M + G + ++ A
Sbjct: 459 NNATRFLYMMKESNCEPDERTY-CELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
++ + D LF+ + + S +Y ++ +A + +M +
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEEN-GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK 257
G++ T+TYT+++N L K A +++ EMEKK + Y I YG E
Sbjct: 577 GLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLI---YGLCQEGKV 633
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+ + + + G +P +Y+ L++ C+ +EA ++ E ++E G SP+ + + +
Sbjct: 634 DAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAH 693
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
C S D A ++F + P K+L+ L + +EA + +++ KK + L
Sbjct: 694 CKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDL 753
Query: 378 RAWKKVEEEL 387
W + + L
Sbjct: 754 IVWTVLVDGL 763
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 265 DAGLKPDTI-SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
D+GL T+ S+N L+ K +M+ A+ VY + +G P+ TF T I LC G
Sbjct: 154 DSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKV 213
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+A VF + PD T L+ G + +K+ +A V R +K PN
Sbjct: 214 QEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPN 266
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 140/300 (46%), Gaps = 2/300 (0%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ V K+ F +T+I + LI + +AG D A+ D
Sbjct: 158 YTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDS 217
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++++N++L + R +DK +F + + +++PD S+ +L+ C G
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM-DQCSVAPDVRSFNILIGGFCRVG 276
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+A++ EM+++ V V+++ ++ ++G + A EM+ G+ D Y
Sbjct: 277 EVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYT 336
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I G + DEM G PD ++YN L+ CK + +A+K+ +EE
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER 396
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G +P+ TF T I+ C GNF+ A ++F + PD T L++G+ +K + +A
Sbjct: 397 GVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKA 456
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G DHA +M LG + + ++ R+ + + DE+ +
Sbjct: 303 LIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM-VGF 361
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y LL C A +LLNEME +GV T+TT+++ +QGN E A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ + ++ + DV YN I GD + EL D+M + P+ I+Y+ L+
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+ +++A + + + G PN T+ + I C SGN K + ++ + PD
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
T L+ G +K++ + A V ++K+
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 136/276 (49%), Gaps = 20/276 (7%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGT 128
L K R D E L+ + + +T P LC LI Y + G F++A++ FD +
Sbjct: 377 LCKQHRLLDAEKLLNEME-ERGVT--PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL 433
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V+++N+L+ R K L+D++ + + P+ I+Y +L+ SHC+ G + A
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR-EILPNHITYSILIDSHCEKGQVEDAF 492
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI--- 245
L+EM KG TY +++ + GN ++ ++ +M + V D+ +N I
Sbjct: 493 GFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGY 552
Query: 246 ---TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
N +G + + M ++PD ++YN ++ + + M +A +V++G+ ++G
Sbjct: 553 IKEENMHGA-----FNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSG 607
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
P+ T+ + I +GN +A+++ E M+H+
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKQAFQLHDE--MIHR 641
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 3/262 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + ++M+E G + +F L+ R ++ LFD + ++ L PD ++Y L+
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ-RLRPDVVTYNSLI 444
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G KA EL ++M + + +TY+ +++ ++G E+A EM KKG
Sbjct: 445 DGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++ YN I G+ ++ ++ + +MR + PD I++N L+ Y K E M A V
Sbjct: 505 PNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ +E+ P+A T+ I GN A +VFK PD T L+ G V
Sbjct: 565 FNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVT 624
Query: 355 KKKIKEAKGVI-RTIKKKFPPN 375
K+A + I + F P+
Sbjct: 625 AGNSKQAFQLHDEMIHRGFAPD 646
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 149/321 (46%), Gaps = 10/321 (3%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKR----FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAG 111
+SP DL +R +S++ F L++ P L L R+ G
Sbjct: 81 SSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRA-GWPH 139
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
+ A R D + + + N ++ + ++ +D + E+ K+ + PD +++
Sbjct: 140 LAQEAYRLVLSSD---SEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRC-VFPDVVTH 195
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L+ + +G D A+ L++ M N+G++ VTY +VL L K ++A+ ++ M++
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQ 255
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
V DV ++N+ I G+ + + EM+ + PD +S++ L+ + + MD
Sbjct: 256 CSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDH 315
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++ G P+ + I C +G+ +A +V E V +PD T L+
Sbjct: 316 AGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLN 375
Query: 351 GLVKKKKIKEAKGVIRTIKKK 371
GL K+ ++ +A+ ++ ++++
Sbjct: 376 GLCKQHRLLDAEKLLNEMEER 396
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S+ + G + A D+M + G ++ ++N+++ RS K ++ ++
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM-RQD 536
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ PD I++ L+ + + A + N ME + V VTY ++N +QGN ++A
Sbjct: 537 NVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDA 596
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPD 271
R++ M G++ D Y I + G+ ++ +L DEM G PD
Sbjct: 597 GRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 10/219 (4%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG---NAEE 221
+P + LL++++ S +A E + + V V +L L + G A+E
Sbjct: 84 TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143
Query: 222 AERLW--SEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A RL S+ E L++ ++ T + G +I EM + PD +++N L+
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDG----ADTVISEMEKRCVFPDVVTHNVLI 199
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ +D A + + + G P T+ + + LC FDKA +VF+
Sbjct: 200 DARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVA 259
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
PD + +L+ G + ++KEA + ++ ++ P+V+
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVV 298
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 6/281 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + G D A ++M G + + FN L+ A C R+ + V I F E+P+K
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI-FREMPRK 488
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++ L+ C+ AL LL +M ++GV TVTY T++N ++G +E
Sbjct: 489 -GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L +EM +G LD YN I G+ ++ + L ++M G P IS N L+
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C++ M++EA + + + G +P+ TF + I LC +G + +F++ P
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAW 380
D T L+ L K + +A ++ I+ F PN R W
Sbjct: 668 DTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN-HRTW 707
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 15/315 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ +L + F I+ L+ K++ + +E +++R Y +AG R +M + +
Sbjct: 118 IGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYS 177
Query: 129 PRSVI-SFNALLFACTRSRLYDKVP-ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
S+N +L + + +D + +K + P ++G+++K+ C D
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK--IPPTLFTFGVVMKAFCAVNEIDS 235
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL LL +M G +V Y T+++ L K EA +L EM G D +N I
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
D R+ E +++ M G PD I+Y +LM CK +D AK ++ + +
Sbjct: 296 GLCKFD--RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK--- 350
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAK 362
P F T I+ G D A V + V + I PD T L+ G K+ + A
Sbjct: 351 -PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 363 GVIRTIKKK-FPPNV 376
V+ ++ K PNV
Sbjct: 410 EVLHDMRNKGCKPNV 424
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 15/270 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN-ALLFACTRSRLYDKVPILFDEIPKK 161
LI S + + A++ ++M +G +FN +L C R+ + ++ + +
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +PD I+YG L+ C G D A +L + + V + T+++ G ++
Sbjct: 318 F--APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRLDD 371
Query: 222 AERLWSEM-EKKGVDLDVAAYNVRITNTYGGDPERLK----ELIDEMRDAGLKPDTISYN 276
A+ + S+M G+ DV YN I YG E L E++ +MR+ G KP+ SY
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLI---YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ +CK +DEA V + +G PN F I C +A ++F+E
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T L+ GL + +IK A ++R
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 146/335 (43%), Gaps = 9/335 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL + ++KH P S Y + L+K R ++ L+E +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQT--LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + A + ++M G I++ L+ + D LF IPK
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK- 350
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAE 220
P+ + + L+ G D A +L++M + G+ TY +++ +K+G
Sbjct: 351 ----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + +M KG +V +Y + + G + +++EM GLKP+T+ +N L+
Sbjct: 407 LALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ +CK + EA +++ + GC P+ TF + I LC A + ++ + +
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVV 526
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+ T L+ +++ +IKEA+ ++ + + P
Sbjct: 527 ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + HA+ M G + +++N L+ A R + L +E+
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM--V 556
Query: 162 YNLSP-DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ SP D+I+Y L+K C +G DKA L +M G + ++ ++N L + G E
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA EM +G D+ +N I G E + +++ G+ PDT+++N LM
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+ CK + +A + + E+G PN RTW
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNH---RTW 707
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 9/272 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+++++ D A+ M + G P SVI + L+ + ++ ++ L +E+
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI-YQTLIHSLSKCNRVNEALQLLEEM-FL 280
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++ ++ C ++A +++N M +G +TY ++N L K G +
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A+ L+ + K ++ +N I T+G + L D + G+ PD +YN L+
Sbjct: 341 AKDLFYRIPKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K ++ A +V + GC PN ++ + C G D+AY V E
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ L+ K+ +I EA + R + +K
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 160/381 (41%), Gaps = 79/381 (20%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y + A+ DQM E+G ++FN L+
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 202
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D++ ++ PD ++YG ++ C G D AL LL +ME +E V Y T+
Sbjct: 203 EAVALVDQMVQR-GCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 261
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--TYG--GDPERL--------- 256
++ L K + ++A L+++ME KG+ DV YN I+ YG D RL
Sbjct: 262 IDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKI 321
Query: 257 -----------------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
++L DEM + PD +Y+ L+ +C ++ +DEAK
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 294 VYEGLEENGCSPNATTFRTWIYHLC----------------------------------- 318
++E + C PN T+ T I C
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+G+ D A K+FK+ V PD T +L++GL K K+++A V ++K K P++
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 378 RAWKKVEEELGLVPAPAVGDG 398
+E G+ A V DG
Sbjct: 502 TYNIMIE---GMCKAGKVEDG 519
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G + A R M E +V++F+AL+ A + + L+DE+ K+
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ PD +Y L+ C D+A + M +K VTY T++ K EE
Sbjct: 355 -SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM ++G+ + YN I + GD + +++ +M G+ PD I+Y+ L+
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +++A V+E L+++ P+ T+ I +C +G + + +F + P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ ++ G +K +EA + R +K+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M L + S+N L+ C RS+L + +L +
Sbjct: 86 LLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ LL +C S A+ L+++M G + TVT+ T+++ L+ A E
Sbjct: 146 YE--PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASE 203
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +M ++G D+ Y + GD + L+ +M ++ D + YN ++
Sbjct: 204 AVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 263
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + +D+A ++ +E G P+ T+ + I LC G + A ++ + P
Sbjct: 264 GLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINP 323
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K+ EA+ + IK+ P++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 138/282 (48%), Gaps = 13/282 (4%)
Query: 72 LAKSKRFSDIETLIES---HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L R+SD L+ + K +P + LI ++ + G A + +D+M +
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVT---FSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++++L+ C RL D+ +F+ + K + P+ ++Y L+K C + ++
Sbjct: 357 DPDIFTYSSLINGFCMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+EL EM +G+ TVTY T++ L++ G+ + A++++ +M GV D+ Y++ +
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E+ + + ++ + ++PD +YN ++ CK +++ ++ L G PN
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD---FNTV 345
+ T I C G ++A +F+E +PD +NT+
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTL 576
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
++ K+KR + L + LI+ QAG D A + F +M G
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
P +I+++ LL + +K ++F E +K + PD +Y ++++ C +G +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVF-EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+L + KGV+ + YTT+++ ++G EEA+ L+ EM++ G D YN I
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRAR 580
Query: 248 TYGGDPERLKELIDEMRDAGLKPD--TIS 274
GD ELI EMR G D TIS
Sbjct: 581 LRDGDKAASAELIKEMRSCGFVGDASTIS 609
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 3/188 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D A+ L EM + V + +L+ + K + L M+ + D+ +YN+
Sbjct: 62 DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 245 ITNTYGGDPERLKEL--IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I N + + L + +M G +PD ++ + L+ YC ++ + +A + + + E G
Sbjct: 122 I-NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ TF T I+ L +A + + V PD T +V GL K+ I A
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240
Query: 363 GVIRTIKK 370
+++ ++K
Sbjct: 241 SLLKKMEK 248
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 157/333 (47%), Gaps = 7/333 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KALD++ + + SP Y + ++ L K+ R + L ++ D +L
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTE--LIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLN 342
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPK 160
NL+ G+ G + F++M +V+S+N ++ A S+ +V FD++ K
Sbjct: 343 NLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKM-K 401
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP + +Y +L+ +C + +KAL LL EM+ KG Y +++N L K E
Sbjct: 402 ADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
A L+ E+++ ++ Y V I + +G G +L +EM++ G PD +YN L
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKH-FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M+ K M++EA + +EENGC+ + + + +G +A ++F+
Sbjct: 521 MSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGI 580
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L+ +EA ++R +K K
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARLMREMKDK 613
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 138/282 (48%), Gaps = 10/282 (3%)
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR-FSDIETLIESHKNDPKITQEPYLCNLI 104
++++ + +P Y + ++ L +SK S++ + + K D E LI
Sbjct: 359 NVFNEMGTWRCTPTVVSY--NTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILI 416
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
Y + + A+ ++MDE G P ++ +L+ A +++ Y+ LF E+ + +
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGN 476
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
++ Y +++K G +A++L NEM+N+G Y +++ + K G EA
Sbjct: 477 VSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANS 535
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L +ME+ G D+ ++N+ I N + G P R E+ + M+ G+KPD ++YN L+ C+
Sbjct: 536 LLRKMEENGCTADINSHNI-ILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCF 594
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
M +EA ++ +++ G +A T+ + L GN D
Sbjct: 595 AHAGMFEEAARLMREMKDKGFEYDAITYSSI---LDAVGNMD 633
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 146/315 (46%), Gaps = 14/315 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R L +++ + ++ I+ + ++ P L L+++ G+A M A+ F Q
Sbjct: 133 IRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQAKGRK 192
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++N+++ + ++KV ++ E+ + + PD I+Y L+ S+ G +D A
Sbjct: 193 CKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSA 252
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L +EM++ ++ T YTT+L +K G E+A L+ EM++ G V Y I
Sbjct: 253 IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG 312
Query: 248 T-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E +L M GL PD + N LM K ++E V+ + C+P
Sbjct: 313 LGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPT 372
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI------PDFNTVKLLVEGLVKKKKIKE 360
++ T I L F+ V + S K+ P T +L++G K ++++
Sbjct: 373 VVSYNTVIKAL-----FESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEK 427
Query: 361 AKGVIRTIKKK-FPP 374
A ++ + +K FPP
Sbjct: 428 ALLLLEEMDEKGFPP 442
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL + + + P + Y + L K+KR+ L + K +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCS--LINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ +G+ G A+ F++M G+ V ++NAL+ ++ + ++ L ++ +
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEEN 543
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D S+ ++L +G +A+E+ M++ G++ VTY T+L C G EE
Sbjct: 544 -GCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A RL EM+ KG + D Y+
Sbjct: 603 AARLMREMKDKGFEYDAITYS 623
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 2/234 (0%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++ AL+ +RLY ++ E+ + +S + L+K+ + KAL + +
Sbjct: 128 TYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQ 187
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYG-G 251
+ + + T+ TY +V+ L ++G E+ +++EM +G D Y+ I++ G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ L DEM+D ++P Y L+ Y K +++A ++E ++ GCSP T+
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
I L +G ++AY ++K + PD + L+ L K +++E V
Sbjct: 308 ELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVF 361
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ A +++ + +++ + S YA + ++ K + S+ L KN
Sbjct: 461 EAANELFKELKENFGNVSSRVYA--VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ +AGM + A +M+E G + S N +L R+ + + +F E K
Sbjct: 519 ALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMF-ETMKH 577
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ PD ++Y LL +G ++A L+ EM++KG E +TY+++L+ +
Sbjct: 578 CGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAV 629
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 164/328 (50%), Gaps = 11/328 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLC 101
+AL+++ + + P +Y+ + + K+ RF D +E + PK ++
Sbjct: 353 EALEMFDEMKQKGIVP--EQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 410
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
I YG++G A++ ++ M G V++ NA+LF +S +F E+ K
Sbjct: 411 -FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL-KA 468
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD I+Y +++K + D+A+++ +M + ++++ LYK G +E
Sbjct: 469 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDE 528
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A R++ ++++ ++ YN + G ++KE L++EM + P+ I+YN +
Sbjct: 529 AWRIFYQLKEMNLEPTDGTYNTLLAGL--GREGKVKEVMHLLEEMYHSNYPPNLITYNTI 586
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C CKN +++A + + GC P+ +++ T IY L +++A+ +F + V
Sbjct: 587 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-L 645
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
IPD+ T+ ++ VK +KEA +I+
Sbjct: 646 IPDYATLCTILPSFVKIGLMKEALHIIK 673
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 67 LTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ ++ L + R SD + + + K+D K + Y+ L+ +G G M ++ M
Sbjct: 270 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI-TLLDKFGDNGDSQSVMEIWNAMKA 328
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +V+++ A++ A C R+++ + +FDE+ +K + P++ SY L+ +
Sbjct: 329 DGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQK-GIVPEQYSYNSLISGFLKADRF 386
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-V 243
ALEL M+ G + T+ +N K G + +A + + M+ KG+ DV A N V
Sbjct: 387 GDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 446
Query: 244 RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G K + E++ G+ PDTI+Y ++ C K DEA K++ + EN C
Sbjct: 447 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 506
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ + I L +G D+A+++F + ++ P T L+ GL ++ K+KE
Sbjct: 507 VPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 566
Query: 364 VIRTI-KKKFPPNVL 377
++ + +PPN++
Sbjct: 567 LLEEMYHSNYPPNLI 581
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
++ L K K+ + L++ K+ + +LI + D A F +M ELG
Sbjct: 727 IKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGC 786
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++N LL A +S +++ + +E+ +K ++Y ++ S ++A+
Sbjct: 787 GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK-GYESTYVTYNTIISGLVKSRRLEQAI 845
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-N 247
+L + ++G T TY +L+ L K G E+AE L++EM + G + YN+ + +
Sbjct: 846 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 905
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ E++ L +M D G+ PD SY ++ CK +++ + L E G P+
Sbjct: 906 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 965
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIR 366
T+ I L S ++A +F E +P+ T L+ L K K EA K
Sbjct: 966 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1025
Query: 367 TIKKKFPPNVL 377
+ K + PNV
Sbjct: 1026 LLTKGWKPNVF 1036
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+LC LI+ + A + G +N+L+ L D LF E+
Sbjct: 722 FLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEM 781
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ PD+ +Y LLL + S ++ L++ EM KG E T VTY T+++ L K
Sbjct: 782 -KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 840
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E+A L+ + +G Y + G E + L +EM + G K + YN
Sbjct: 841 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 900
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + ++ +++ + + G +P+ ++ I LC +G + F++ + +
Sbjct: 901 LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG 960
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T LL++GL K K+++EA + ++KK PN+
Sbjct: 961 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1000
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G++ + ++ ++M G + +++N ++ +SR ++ L+ + +
Sbjct: 796 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ- 854
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP +YG LL +G + A L NEM G + Y +LN GN E+
Sbjct: 855 GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 914
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M +G++ D+ +Y + I T G ++ + GL+PD I+YN L+
Sbjct: 915 CHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 974
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K++ ++EA ++ +++ G PN T+ + I HL +G +A K+++E + P+
Sbjct: 975 LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPN 1034
Query: 342 FNTVKLLVEG 351
T L+ G
Sbjct: 1035 VFTYNALIRG 1044
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 8/255 (3%)
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHA 116
S+ + + L KS+R +E I+ + N P C L+ +AG + A
Sbjct: 823 STYVTYNTIISGLVKSRR---LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDA 879
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
F++M E G + +N LL + +KV LF ++ + ++PD SY +++
Sbjct: 880 ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ-GINPDIKSYTIIID 938
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
+ C +G + L ++ G+E +TY +++ L K EEA L++EM+KKG+
Sbjct: 939 TLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVP 998
Query: 237 DVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
++ YN I + G ++ +E+ G KP+ +YN L+ Y + D A Y
Sbjct: 999 NLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAY 1058
Query: 296 EGLEENGCSPNATTF 310
+ GC PN++T+
Sbjct: 1059 GRMIVGGCLPNSSTY 1073
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 54/343 (15%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI------ESH 88
++S FD + AL++Y + P Y +V +A KR D+ET++ E+H
Sbjct: 171 VKSGFDRE-ALEVYRVMMVDGVVPSVRTY----SVLMVAFGKR-RDVETVLWLLREMEAH 224
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
P + +C IR GQA FD A R +M+ G
Sbjct: 225 GVKPNVYSYT-IC--IRVLGQAKRFDEAYRILAKMENEGC-------------------- 261
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
PD I++ +L++ CD+G A ++ +M+ + VTY T
Sbjct: 262 ----------------KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 305
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDA 266
+L+ G+++ +W+ M+ G + +V AY I G E L E+ DEM+
Sbjct: 306 LLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQK 364
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G+ P+ SYN L++ + K + +A ++++ ++ +G PN T +I + SG KA
Sbjct: 365 GIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKA 424
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ ++ +PD ++ GL K ++ AK V +K
Sbjct: 425 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 467
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 132/286 (46%), Gaps = 8/286 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
+ +L + + KS R ++ + E H+ + T Y +I ++ + A+ +
Sbjct: 791 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY-NTIISGLVKSRRLEQAIDLYY 849
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+ G + ++ LL ++ + LF+E+ +Y + Y +LL H +
Sbjct: 850 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM-LEYGCKANCTIYNILLNGHRIA 908
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G+++K L +M ++G+ +YT +++ L K G + + ++ + G++ D+ Y
Sbjct: 909 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 968
Query: 242 NVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N+ I G +RL+E L +EM+ G+ P+ +YN L+ K EA K+YE L
Sbjct: 969 NLLIDGL--GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1026
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
G PN T+ I SG+ D AY + ++ +P+ +T
Sbjct: 1027 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1072
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 5/285 (1%)
Query: 94 ITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV- 151
I E Y N LI + +A F A+ F MD G + + +LF + + +
Sbjct: 366 IVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN--GYTHVLFINYYGKSGESIK 423
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
I E+ K + PD ++ +L SG A + +E++ GV T+TYT ++
Sbjct: 424 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 483
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
C K +EA +++ +M + DV A N I Y G + + ++++ L+P
Sbjct: 484 CCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEP 543
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+YN L+ + + E + E + + PN T+ T + LC +G + A +
Sbjct: 544 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 603
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
IPD ++ ++ GLVK+++ EA + +KK P+
Sbjct: 604 YSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 648
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 141/346 (40%), Gaps = 10/346 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKH---YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND 91
LRS P +AL+ + S ++ + S Y +L + R D+ + + +
Sbjct: 64 LRSADGPAEALERFRSAARKPRVAHTTASCNYMLEL----MRGHGRVGDMAEVFDVMQRQ 119
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+ G G A M E G + ++N L++ +S +D+
Sbjct: 120 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG-FDRE 178
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ + + P +Y +L+ + + L LL EME GV+ +YT +
Sbjct: 179 ALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 238
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
L + +EA R+ ++ME +G DV + V I G K++ +M+ + KP
Sbjct: 239 VLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 298
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y L+ + N +++ ++ +G + N + I LC G +A ++F
Sbjct: 299 DRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 358
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PN 375
E +P+ + L+ G +K + +A + + + P PN
Sbjct: 359 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPN 404
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 135/295 (45%), Gaps = 10/295 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ ALD+ S++ P S Y + + L K +R+++ ++ K I LC
Sbjct: 597 NDALDMLYSMTTKGCIPDLSSY--NTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLC 653
Query: 102 NLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++ S+ + G+ A+ D + G+ S ++L+ + +K I F EI
Sbjct: 654 TILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEK-SIEFAEIIA 712
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ D L+K C + +A EL+ + ++ GV + T Y +++ L + +
Sbjct: 713 SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLID 772
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNF 277
AE L++EM++ G D YN+ + G R++E++ +EM G + ++YN
Sbjct: 773 IAEGLFAEMKELGCGPDEFTYNLLLDAM--GKSMRIEEMLKVQEEMHRKGYESTYVTYNT 830
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+++ K+ +++A +Y L G SP T+ + L +G + A +F E
Sbjct: 831 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 885
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 16/311 (5%)
Query: 11 CTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR 70
C + GS ++ + VS S S P K + V P R A + +
Sbjct: 6 CCSGVLGGSPPSSRTAGVS---SPGLSPSRPSKRRIGRARVQPRAPPPCDERRAAEDVIH 62
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCN----LIRSYGQAGMFDHAMRTFDQMDEL 126
L + ++ S P++ CN L+R +G+ G D A FD M
Sbjct: 63 ALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVG--DMA-EVFDVMQRQ 119
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+V +F A+ P+ + K+ + + +Y L+ SG +
Sbjct: 120 IVKANVGTFAAIFGGLGVEGGLRSAPVAL-PVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 178
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
ALE+ M GV + TY+ ++ K+ + E L EME GV +V +Y + I
Sbjct: 179 ALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 238
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G +R E ++ +M + G KPD I++ L+ C + +AK V+ ++++
Sbjct: 239 VL--GQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 296
Query: 304 SPNATTFRTWI 314
P+ T+ T +
Sbjct: 297 KPDRVTYITLL 307
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 156/338 (46%), Gaps = 8/338 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KAL +Y + + P Y ++ + K+KR + L E +N
Sbjct: 107 KALAVYRVMGQSGLRP--DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSI 164
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G + A++ F M G ++ ++ +++ +S DK LF+E+ +
Sbjct: 165 LIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE- 223
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L ++ Y L+ SG +D A +L EM +KG++ VT+T+++ L G A EA
Sbjct: 224 GLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEA 283
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
R++ E G LDV YNV I +RL E + E+ + GL PD ++N LM
Sbjct: 284 RRIFQEARDVGCALDVNLYNVLIDTLC--KSKRLDEAWEIFGELEEDGLVPDVYTFNALM 341
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK+ + +A + ++ GC+P+ T + T I L SG ++A ++ E +
Sbjct: 342 DGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYE 401
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
PD T L++ K +I++A + I K N +
Sbjct: 402 PDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTV 439
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 153/338 (45%), Gaps = 37/338 (10%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFD-------------- 114
V L ++RF++ E ++ + I Q L R Y AG+ +
Sbjct: 26 VEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEALKRMEGHRC 85
Query: 115 ---------------------HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
A+ + M + G +FN L+ A +++ D V
Sbjct: 86 ALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWK 145
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+E+ + N SP+ I+Y +L+ + C G +KAL++ +M+++G TYT++++ L
Sbjct: 146 LFEEMQNQ-NCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGL 204
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDT 272
K G+ ++A L+ EM +G+ YN I G + +L EM GL+PD
Sbjct: 205 GKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+++ L+ EA+++++ + GC+ + + I LC S D+A+++F E
Sbjct: 265 VTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGE 324
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+PD T L++GL K +I +A ++ +K+
Sbjct: 325 LEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKR 362
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL ++ + P Y + L KS L E ++ +
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTS--MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G++G D A + F +M G ++F +L++ + + +F E +
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE-ARD 292
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D Y +L+ + C S D+A E+ E+E G+ T+ +++ L K G +
Sbjct: 293 VGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHD 352
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +M++ G DV YN I G E +L+ EM+ G +PD ++YN L+
Sbjct: 353 AFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF----KESVMV 336
CK +++A +++E + G + N T+ T + LC +G D+AYK+F +E+V
Sbjct: 413 ESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDG 471
Query: 337 HKIPDFNTVKLLVEG 351
PDF T L+ G
Sbjct: 472 VIDPDFVTYTTLLNG 486
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEP 98
D+A +I+ + + P Y + + L KS R D L+ K P +T
Sbjct: 316 DEAWEIFGELEEDGLVP--DVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYN 373
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDE 157
L + +R ++G + A + +M LG V+++N L+ +C R+ D + LF+E
Sbjct: 374 TLIDGLR---KSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALR-LFEE 429
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT----VTYTTVLNCL 213
I K + ++Y +L C +G D+A +L N M+ + V+ VTYTT+LN
Sbjct: 430 ISAKG--FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGA 487
Query: 214 YKQGNAEEAERL 225
+ G +E A L
Sbjct: 488 RQAGLSELANSL 499
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 132/269 (49%), Gaps = 10/269 (3%)
Query: 113 FDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIP--KKYNLSPDKI 169
FDH R ++M G P S IS L+ C +SR K+ FD I +K+ P
Sbjct: 141 FDHLERILEEMSLSGFGPSSNISIE-LVANCVKSR---KLREAFDIIQTMRKFKFRPAFS 196
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+Y +L+ + + D L L ++M+ G EV +TT++ ++G + A L EM
Sbjct: 197 AYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEM 256
Query: 230 EKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+ +D D+ YNV I + +G G + + EM+ GL PD ++Y ++ CK
Sbjct: 257 KSNSLDADIVLYNVCI-DCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANR 315
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+DEA +++E LE+N P A + T I +G FD+AY + + IP
Sbjct: 316 LDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNC 375
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPNV 376
++ L KK++++EA + +K+ PNV
Sbjct: 376 ILTCLGKKRRVEEALRIFEEMKRDAVPNV 404
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 140/274 (51%), Gaps = 5/274 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELG 127
+R A+ R +L++ K++ + + L N+ I +G+AG D + + F +M G
Sbjct: 237 IRVFAREGRVDAALSLLDEMKSN-SLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHG 295
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+++ +++ ++ D+ LF+++ + + P +Y ++ + +G D+A
Sbjct: 296 LMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKV-PCAYAYNTMIMGYGSAGKFDEA 354
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LL + KG + + Y +L CL K+ EEA R++ EM++ V +V YN+ I
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDM 413
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E+ D+M AGL P+ ++ N ++ CK + ++EA ++EG+++ C+PN
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
A TF + I L G D AY ++++ + +P
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 507
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 9/333 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D + + + H P Y + V L K+ R + L E + + K+
Sbjct: 282 DMSWKFFHEMKSHGLMPDDVTYTSMIGV--LCKANRLDEAVELFEQLEQNRKVPCAYAYN 339
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I YG AG FD A ++ G+ SVI++N +L + R ++ +F+E+ K
Sbjct: 340 TMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM--K 397
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +Y +L+ C G + ALE+ ++ME G+ +T +++ L K EE
Sbjct: 398 RDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEE 457
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A ++ M+ K + ++ I G R+ + L ++M D G P I Y L
Sbjct: 458 ACSIFEGMDDKVCTPNAVTFSSLIDGL--GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K ++ K+Y+ + GCSP+ T T++ + +G +K +F+E
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 575
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
IPD + +L+ GLVK E + +K++
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQ 608
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 43/366 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A I+ + +P + ++ + L K R D +L E + +
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSS--LIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYT 513
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIRS+ + G + + + +M G + N + ++ +K LF EI
Sbjct: 514 SLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREI-NA 572
Query: 162 YNLSPDKISY--------------------------GLLLKSH---------CDSGSSDK 186
+ PD SY G +L +H C SG +K
Sbjct: 573 HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 632
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A +LL EM+ KG T VTY +V++ L K +EA L+ E + G+ L+V Y+ I
Sbjct: 633 AYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLID 692
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G R+ E +++E+ GL P+ ++N L+ K E ++EA ++ +++ C
Sbjct: 693 GF--GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKC 750
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN T+ I LC F+KA+ ++E + P+ T ++ GL K I EA G
Sbjct: 751 PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASG 810
Query: 364 VIRTIK 369
+ K
Sbjct: 811 LFSRFK 816
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 124/272 (45%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG+ + F M E G ++NA++ +S +K L +E+ K
Sbjct: 585 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 644
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++YG ++ D+A L E ++ G+++ V Y+++++ K G +EA
Sbjct: 645 H-PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 703
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFLM 279
+ E+ +KG+ +V +N + E + E + M+D P+ I+Y+ L+
Sbjct: 704 YLIMEELMQKGLTPNVYTWNCLLDALV--KAEEINEALICFQSMKDLKCPPNQITYSILI 761
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ ++A ++ +++ G PN T+ T I L +GN +A +F I
Sbjct: 762 NGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI 821
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD + ++EGL K +A + + K
Sbjct: 822 PDSASYNAMIEGLSSANKAMDAYALFEETRLK 853
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LAK R + L E K++ +LI +G+ G D A +++ + G +
Sbjct: 659 LAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 718
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V ++N LL A ++ ++ I F + K P++I+Y +L+ C +KA
Sbjct: 719 VYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILINGLCRVRKFNKAFVFW 777
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
EM+ G++ T+TYTT+++ L K GN EA L+S + G D A+YN I
Sbjct: 778 QEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSA 837
Query: 252 DPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+ L +E R G T + L+ K E +++A V L+E S +A+
Sbjct: 838 NKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKETAKSQHAS 895
>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
Length = 438
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 124/231 (53%), Gaps = 4/231 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A T+ +M + +V+++++++ A +++ DK + + + K
Sbjct: 210 VINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKN- 268
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +L +C SG +A+ L +M + GVE VTY +++N L K G EA
Sbjct: 269 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEA 328
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G++ D+A Y + T G E + L+D M G++PD +N L+
Sbjct: 329 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE-MHALLDLMVRNGIQPDHHVFNILIC 387
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
Y K E +D+A V+ + ++G +PN + T I LC SG+ D A F+
Sbjct: 388 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 438
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 129/276 (46%), Gaps = 9/276 (3%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
P LC LI +AG D + + G I+F LL C R D + I
Sbjct: 93 PDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDI 152
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVL 210
+ + + + PD S +LLK CD S +ALELL+ M + G V+YTTV+
Sbjct: 153 VLRRM-TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 211
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLK 269
N +K+G++++A + EM + + +V Y+ I ++ E+++ M G+
Sbjct: 212 NGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 271
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PD ++YN ++ YC + EA + + +G PN T+R+ + +LC +G +A K+
Sbjct: 272 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKI 331
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
F PD T + L++G K + E ++
Sbjct: 332 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y G D M G FN + A + + D+ +FD++ +++
Sbjct: 313 LLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQW 372
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP ++YG L+ + C G D A+ N+M N+GV +++++ L E+A
Sbjct: 373 -LSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKA 431
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L+ E+ +G+ L+ A +N+ + N G + LID M ++PD ISYN L+
Sbjct: 432 EKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDG 491
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C +DEA K+ + + G P+ T+ T ++ C + D AY +F+E +M P
Sbjct: 492 HCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPG 551
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL + + EAK
Sbjct: 552 VVTYNTILHGLFQIGRFCEAK 572
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+ +Y + M D AM FD+M + V+++ AL+ A + D + F+++ +
Sbjct: 348 MFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINE- 406
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++PD + L+ C +KA +L E+ ++G+ + + ++ L ++G EA
Sbjct: 407 GVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEA 466
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+RL M + V DV +YN + + G + +L+D M GLKPD +YN L+
Sbjct: 467 QRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHG 526
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +D+A ++ + G +P T+ T ++ L G F +A +++ + + D
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCD 586
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T +++ GL + + EA + +++ K
Sbjct: 587 IYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 164/377 (43%), Gaps = 17/377 (4%)
Query: 13 ATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR-YAQDLTVRR 71
T AA + +A+S D AL ++ + YA P S R + + LTV
Sbjct: 7 VTAAADRCLELERVIAGRARS---GSLGLDDALKLFDEMLT-YARPASVRTFNRLLTVVS 62
Query: 72 LAKSKRFSD-IETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELG 127
A+ S+ + +L + + P C LI + + G H F + + G
Sbjct: 63 RARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTG 122
Query: 128 -TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
+ + + F LL C R+ + IL +P+ + + + ISY +LLK C+ ++
Sbjct: 123 WSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPE-FGCTLNVISYNILLKGLCNEKRAE 181
Query: 186 KALELLNEMENKGVEVTT---VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ALEL++ M + G T VTYTTV++ L K + A+ ++ M KGV + Y
Sbjct: 182 EALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYT 241
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I G + + +++ EM GL+PD + Y L+ CKN EA+ +++ L
Sbjct: 242 CLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRK 301
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ T + ++ G + + V PD + ++ KK I EA
Sbjct: 302 GIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEA 361
Query: 362 KGVIRTIKKKF-PPNVL 377
+ +++++ P V+
Sbjct: 362 MHIFDKMRQQWLSPGVV 378
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 6/321 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ I+ + + + SP Y + L K R D N+
Sbjct: 359 DEAMHIFDKMRQQWLSPGVVNYGA--LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFS 416
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L+ ++ A + F ++ + G + FN L+ C R+ + ++ ++
Sbjct: 417 SLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLI--DLML 474
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ ++ PD ISY L+ HC +G D+A +LL+ M + G++ TY T+L+ K +
Sbjct: 475 RVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRID 534
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A L+ EM KG+ V YN + + G KEL M + K D +Y ++
Sbjct: 535 DAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIIL 594
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+N +DEA K+++ L + T I L G + A +F +
Sbjct: 595 NGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLV 654
Query: 340 PDFNTVKLLVEGLVKKKKIKE 360
PD T +L+ E L+K+ ++E
Sbjct: 655 PDVETYRLIAENLIKEGSLEE 675
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 2/225 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G D A + D M +G ++N LL ++R D LF E+ K
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMK- 546
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P ++Y +L G +A EL M N + TYT +LN L + +EA
Sbjct: 547 GLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEA 606
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ + K + LD+ N+ I GG E +L + GL PD +Y +
Sbjct: 607 FKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAEN 666
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
K ++E +++ +EENG +PN+ + L G+ +A
Sbjct: 667 LIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRA 711
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 7/276 (2%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDK 150
P+ ++ L ++ ++ +A M D A+ F + LG + S NALL A R+R +
Sbjct: 79 PRFSESAALV-VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSD 137
Query: 151 VPILFDEIPKKY---NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
F + ++P+ +Y ++L+S C G D+A+ L + + + V +TY+
Sbjct: 138 ADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYS 197
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM-RD 265
T++ L KQ + A L EM + V DV YN + + G+ E++ + D++ +D
Sbjct: 198 TLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKD 257
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +P+ +YN ++ CK E +V+E + N P+ T+ I+ LC SG+ D
Sbjct: 258 PGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDG 317
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
A +V+ E + + D LV+G + +++EA
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%), Gaps = 7/280 (2%)
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+IT +C L + DHA+ D+M V+ +NALL C ++ ++KV
Sbjct: 193 RITYSTLMCGL----AKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVM 248
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
++D++ K P+ +Y ++L C G + E+ M ++ +TY +++
Sbjct: 249 RVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHG 308
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L + G+ + A R++SE+ K G+ +D A YN + G + + D AGL+ +
Sbjct: 309 LCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-N 367
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+YN ++ + M+DEA ++++ LE++ C P+ TF T I+ LC +G +KA+ +F
Sbjct: 368 LRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIF 427
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+E+ + K D + ++ GL ++ +A V + K
Sbjct: 428 EEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 26/290 (8%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L++ + QAG A + +D G R++ ++N ++ S + D+ L+D + K
Sbjct: 339 SLVKGFCQAGRVQEAWKFWDSAGFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKD 397
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +++G L+ C +G ++KA + E G ++ +Y++++N L G +
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457
Query: 222 AERLWSEMEKKGVDLDVAAYNVRIT---NTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
A +++ +M+K G + YN I+ Y D R+ +M D G P I+YN
Sbjct: 458 AVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS---KMADNGCSPTVITYNT 514
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA--------YKV 329
L+ CK E EA V + ENG +P+ TT+ + I L D A YK
Sbjct: 515 LIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKG 574
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNVL 377
K VM+H I L+ GL K+ EA V +K+K PPN++
Sbjct: 575 LKVDVMMHNI--------LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 5/261 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++I G A++ +++MD+ G + +NAL+ C R D V I + ++
Sbjct: 444 SMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRI-YSKMAD 502
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
SP I+Y L+ C + +A + EM G TY +++ L+ +
Sbjct: 503 N-GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A +W ++ KG+ +DV +N+ I + G E L D P+ ++YN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M + +D+A ++ + E+G P+ ++ T I LC + ++ E +
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681
Query: 339 IPDFNTVKLLVEGLVKKKKIK 359
IP T +LV ++K I+
Sbjct: 682 IPTVITWNILVRAVIKYGPIQ 702
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND---PKITQEPYL 100
A+ IYS ++ + SP Y + + L K++++ + ++ + P IT
Sbjct: 493 AVRIYSKMADNGCSPTVITY--NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG-- 548
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+LIR D A+ + Q+ G V+ N L+ + D+ +F ++ +
Sbjct: 549 -SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKE 607
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K N P+ ++Y L+ ++G DKA L + G+E ++Y T + L
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH 667
Query: 221 EAERLWSEMEKKGVDLDVAAYN--VRITNTYG 250
E +L E+ +G+ V +N VR YG
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M++ V+ + L+ + + R + LF E+ K
Sbjct: 185 LINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK- 243
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ ++ L+ + C+ G LLNEM + + ++ TTV++ L K+G +A
Sbjct: 244 GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQA 303
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M + GV+ DV Y I + + + ++ D M G P+ SYN L+
Sbjct: 304 HDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK E MD+A ++E + PN T+ T I+ LC G A +F+E V +IPD
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++L++ L K + +A +++ I+
Sbjct: 424 LVTYRILLDYLCKNCHLDKAMALLKAIE 451
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 5/272 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + D A++ FD M G +V S+N L+ + DK LF+E+ ++
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQ- 383
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++Y L+ C G A+ L EM G VTY +L+ L K + ++A
Sbjct: 384 KLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKA 443
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +E +D D+ Y + I G+ E ++L + GLKP+ +YN +
Sbjct: 444 MALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHG 503
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK ++DEA K++ ++EN CS + T+ T + +A ++ +E + D
Sbjct: 504 LCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCD 563
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+T LLV G++ + +++ ++ FP
Sbjct: 564 VSTTTLLV-GMLSDDGLDQSEA--HKLEDMFP 592
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 46/297 (15%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK--KYNLSPDKISYGLLLKSHC 179
+MD G P +V + N L+ + ++V F + K K PD S+ L+K C
Sbjct: 99 KMDSFGIPHNVYTLNVLINSFCH---LNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLC 155
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G +AL L ++M +G + V Y T++N L K G+ A RL MEK DV
Sbjct: 156 LEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVV 215
Query: 240 AYNVRI---------TNTYG---------------------------GDPERLKELIDEM 263
Y I T + G+ + + L++EM
Sbjct: 216 VYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
D+ + P+ IS ++ CK M+ +A V + + ++G P+ T+ I C
Sbjct: 276 VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335
Query: 324 DKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
D+A KVF +MVHK P+ + L+ G K +++ +A + + ++K PN +
Sbjct: 336 DEAVKVF--DMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTV 390
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S + A F +M G ++++ N+L++A + V L +E+
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS- 278
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ IS ++ + C G +A ++++ M GVE VTYT +++ + +EA
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
+++ M KG +V +YN I N Y ER+ + L +EM L P+T++YN L+
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLI-NGYC-KIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C + +A ++ + G P+ T+R + +LC + + DKA + K +
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLD 456
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD ++++G+ + ++++A+ + + K PNV
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNV 494
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 120/267 (44%), Gaps = 11/267 (4%)
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR----SRLYDKVPILF 155
CN L+ + G + H ++M + + IS ++ A + ++ +D V ++F
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ + PD ++Y L+ HC D+A+++ + M +KG +Y T++N K
Sbjct: 312 -----QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCK 366
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
++A L+ EM ++ + + YN I + G + L EM G PD ++
Sbjct: 367 IERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVT 426
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L+ CKN +D+A + + +E + P+ + I +C +G + A +F
Sbjct: 427 YRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLS 486
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P+ T ++ GL K+ + EA
Sbjct: 487 SKGLKPNVWTYNIMTHGLCKRGLLDEA 513
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A F +M +G + ++N L+ + + +K L EI KK
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI-KKE 436
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL+ + G ++ C G +A EL EM + G++ V YTT++ L K+G EEA
Sbjct: 437 NLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEA 496
Query: 223 ERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ M+ +G+ DV YN V I G E K + EM GLKP+ +Y +
Sbjct: 497 IKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ M A++ + + ++G +PN I C GN KA+ F+ + +PD
Sbjct: 557 YCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPD 616
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T +L+ GL K K++EA GV + K P+V
Sbjct: 617 VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 140/281 (49%), Gaps = 16/281 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFAC---TRSRLYDKVPILFDEI 158
I Y +AG A R+F +M + G P VI + + C ++ + K + D+
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ- 611
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ PD ++ +L+ +G +A+ + +E+ +KG+ TYT++++ L K+G+
Sbjct: 612 ----GVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
+ A L +M KKG++ ++ YN I G+ + +EL D + + GL ++++Y+
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV--M 335
++ YCK+ + EA +++ G++ G P++ + I C +GN +KA +F V
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
+ P FN L++G K K+ EA ++ + PN
Sbjct: 788 IASTPAFNA---LIDGFFKLGKLIEAYQLVEDMVDNHITPN 825
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 4/295 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELG 127
V+ L K RF + ++ K D ++ + + N +I + +AG + +M G
Sbjct: 484 VKGLVKEGRFEEAIKILGVMK-DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+V ++ A + R+ F E+ ++P+ + L+ +C G++ KA
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS-GIAPNDVICTDLIDGYCKDGNTTKA 601
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
M ++GV T++ +++ L K G +EA ++SE+ KG+ DV Y I+N
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN 661
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
GD + EL D+M G+ P+ ++YN L+ CK + +A+++++G+ E G + N
Sbjct: 662 LCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARN 721
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ T+ T I C S N +A+++F +V PD L++G K ++A
Sbjct: 722 SVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKA 776
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 3/278 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI +Y + G + M+E G ++++++ ++ R+ D+ L + K
Sbjct: 237 NLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANK 296
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD Y L+ C S + +L+EM G++ V YT ++N KQ +
Sbjct: 297 -GLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGG 355
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ EM + + L+ Y I GD E+ ++L EM G+KPD +YN L+
Sbjct: 356 AFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIE 415
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K + M++A ++ +++ + NA + LC G+ +A ++F+E + P
Sbjct: 416 GYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKP 475
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ +V+GLVK+ + +EA ++ +K + P+V
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVF 513
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ PD +Y L+ ++C G ++ +L +ME KG VTY+ V+ L + G+ +EA
Sbjct: 228 IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEAL 287
Query: 224 RLWSEMEKKGVDLDVAAYNVRIT-------NTYGGDPERLKELIDEMRDAGLKPDTISYN 276
L M KG+ D Y I +T G K ++DEM GLKPD ++Y
Sbjct: 288 ELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEG------KSMLDEMYTMGLKPDHVAYT 341
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ + K + A +V E + N T+ I+ LC G+ +KA +F E M+
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L+EG K + +++A ++ IKK+
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKE 436
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 10/336 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLIESHKNDPKITQEP 98
D +KA D++S ++ P Y + + K + E LIE K + +T
Sbjct: 387 DLEKAEDLFSEMTMMGIKPDIQTY--NCLIEGYYKVQNMEKAYELLIEIKKEN--LTANA 442
Query: 99 YLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFD 156
Y+C ++ G A F +M G +++ + ++ + R + + IL
Sbjct: 443 YMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKIL-- 500
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ K LSPD Y ++ C +G ++ L EM KG++ TY ++ +
Sbjct: 501 GVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRA 560
Query: 217 GNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISY 275
G + AER + EM G+ DV ++ G+ + M D G+ PD ++
Sbjct: 561 GEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTH 620
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ L+ KN + EA V+ L + G P+ T+ + I +LC G+ A+++ +
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCK 680
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T L+ GL K +I +A+ + I +K
Sbjct: 681 KGINPNIVTYNALINGLCKLGEIAKARELFDGIPEK 716
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 124/255 (48%), Gaps = 3/255 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + G A D M + G +++++NAL+ + K LFD IP+K
Sbjct: 657 SLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEK 716
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+ + ++Y ++ +C S + +A +L + M+ GV + Y +++ K GN E+
Sbjct: 717 -GLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ M ++G+ A+N I + G +L+++M D + P+ ++Y L+
Sbjct: 776 ALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C + EA++++ +++ PN T+ + ++ G + + +F E V P
Sbjct: 835 YHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894
Query: 341 DFNTVKLLVEGLVKK 355
D ++V+ +K+
Sbjct: 895 DDLAWSVMVDAHLKE 909
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 117/236 (49%), Gaps = 5/236 (2%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIP 159
C LI +AG + A+ F M E G S +FNAL+ + +L + ++ D +
Sbjct: 761 CALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVD 819
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++P+ ++Y +L++ HC G+ +A +L EM+ + V +TYT++L+ + G
Sbjct: 820 N--HITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRR 877
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E L+ EM +G+ D A++V + + G+ + +L+D+M G+ Y L
Sbjct: 878 SEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTIL 937
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ CK+ + E KV + +E+ G + T T + +G D+A +V + V
Sbjct: 938 IDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+E ++++H +T LI + G A + F +M + +V+++ +LL
Sbjct: 814 VEDMVDNHITPNHVTYTI----LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLH 869
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
R ++ LFDE+ + + PD +++ +++ +H G+ KAL+L+++M ++GV
Sbjct: 870 GYNRIGRRSEMFSLFDEMVAR-GIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVN 928
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
V YT +++ L K N E ++ E+EK+G L +A
Sbjct: 929 VCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLA 967
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
Query: 103 LIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ ++ +A M D A+ F D LG + S NALL A R+R Y + F +
Sbjct: 130 VLSAFSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLSHG 189
Query: 162 Y---NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
L+P+ +Y ++L+S C G D+A+ L + + +GV VTY+T+++ L K
Sbjct: 190 ACGRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQ 249
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM-RDAGLKPDTISYN 276
+ A L EM GV D YN ++ + G E+ ++ +++ RD G P+ +Y
Sbjct: 250 LDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYK 309
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK EA +V+ + N P+ T+ I+ LC SG+ D A +V+ + V
Sbjct: 310 VMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKA 369
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
+ D L++G K + EA
Sbjct: 370 GLVLDVAVYNSLIKGFCKVGRTGEA 394
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 36/166 (21%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK------------ 160
D+A+ D+M + G + +NALL C ++ +++K +++++ +
Sbjct: 250 LDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYK 309
Query: 161 -----------------------KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
N PD ++YG+L+ C SG D A + ++M
Sbjct: 310 VMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKA 369
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
G+ + Y +++ K G EA + W G+ + YNV
Sbjct: 370 GLVLDVAVYNSLIKGFCKVGRTGEAWKFWDSTGFSGIR-QITTYNV 414
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 139/291 (47%), Gaps = 6/291 (2%)
Query: 90 NDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
N I Y N LI Y GM D A + F +M E G V+++N L+ R + +
Sbjct: 255 NRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKF 314
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
+ L ++ K LSP+ ++Y +L+ CD G D A+ L N++++ G+ T VTY T
Sbjct: 315 GEAVKLVHKV-NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNT 373
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDA 266
++ K N A L EME++ + Y + I + + ++ E+ M +
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILI-DAFARLNYTDKACEMHSLMEKS 432
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
GL PD +Y+ L+ C N M EA K ++ L E PN+ + T I+ C G+ +A
Sbjct: 433 GLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRA 492
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
++ E V +P+ + + L + +K KEA+ ++ + I P+V
Sbjct: 493 LRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSV 543
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 4/322 (1%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
S + H S AQ L +R ++ S + L ++H T P ++ +Y
Sbjct: 42 SFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTSCS-TYTPLYDAIVNAYV 100
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+ D A+ M G +FN LL RS +DK +F+ + K L +
Sbjct: 101 HSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLKSKVVL--NA 158
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
S+G+++ C++G + LL +E G+ V YTT+++ K G+ A+ L+ +
Sbjct: 159 YSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCK 218
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M++ G+ + Y+V + + +R ++ + M +G+ P+ +YN L++ YC + M
Sbjct: 219 MDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGM 278
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D+A KV+ + E G + T+ I LC F +A K+ + V P+ T +
Sbjct: 279 VDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNI 338
Query: 348 LVEGLVKKKKIKEAKGVIRTIK 369
L+ G K+ A + +K
Sbjct: 339 LINGFCDVGKMDTAVRLFNQLK 360
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LC LIRS FD A F+ + + SF ++ C + + +V L +
Sbjct: 131 LCLLIRS----NYFDKAWWIFNVLKS-KVVLNAYSFGIMITGCCEAGYFVRVFRLL-AVL 184
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++ LSP+ + Y L+ C +G A L +M+ G+ TY+ ++N +KQG
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQ 244
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
E +++ M + G+ + AYN I+ G ++ ++ EMR+ G+ ++YN L
Sbjct: 245 REGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNIL 304
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+ + EA K+ + + G SPN T+ I C G D A ++F +
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGL 364
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P T L+ G K + + A +++ ++++
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 133/322 (41%), Gaps = 50/322 (15%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +MD LG + +++ L+ + L + +++ + + + P+ +Y L+
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRS-GIVPNAYAYNCLI 270
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+C+ G DKA ++ EM KG+ +TY ++ L + EA +L ++ K G+
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 236 LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM------ 288
++ YN+ I G + L ++++ +GL P ++YN L+ Y K E +
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 289 -----------------------------DEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
D+A +++ +E++G P+ T+ I+ C
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL- 377
+GN +A K FK +H P+ ++ G K+ A ++ + PNV
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVAS 510
Query: 378 -----------RAWKKVEEELG 388
WK+ E LG
Sbjct: 511 FCSTMGLLCRDEKWKEAELLLG 532
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L P+ + Y ++ +C GSS +AL LLNEM + G+ ++ + + L + +EA
Sbjct: 468 HLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEA 527
Query: 223 ERLWSEMEKKGVDLDVAAY 241
E L +M G+ V+ Y
Sbjct: 528 ELLLGQMINSGLKPSVSLY 546
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 161/384 (41%), Gaps = 39/384 (10%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP++AL ++ + Y+ + +LAKS+ F ++ ++ + +E
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSS--LIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI+ YG+AG D A+ F ++ R++ S N L+ + +K FD
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-A 177
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK---- 215
K L P+ +S+ +L+K D + A ++ +EM V+ + VTY +++ L +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 216 -------------------------------QGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+G EA++L +ME +G + Y +
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+++ G + K L+ EM+ +KPD + YN L+ C + EA +V ++ GC
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC 357
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PNA T+R I C +FD V + P T +V GL+K + A
Sbjct: 358 KPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACF 417
Query: 364 VIRTIKKKFPPNVLRAWKKVEEEL 387
V+ + KK AW+ + +L
Sbjct: 418 VLEVMGKKNLSFGSGAWQNLLSDL 441
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 153/322 (47%), Gaps = 16/322 (4%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R K+K+ + I ++E+ P + L I Y ++G D A+ ++M
Sbjct: 153 RSGKTKKATRIMEILENSGAVPDVITYNVL---IGGYCKSGEIDKALEVLERMS---VAP 206
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V+++N +L + C +L + + +L ++ ++ PD I+Y +L+++ C+ +A++
Sbjct: 207 DVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE--CYPDVITYTILIEATCNDSGVGQAMK 264
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL+EM KG + VTY ++N + K+G +EA + + M G +V +N+ + +
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324
Query: 250 GG----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
D ERL + +M G P +++N L+ C+ ++ A V E + ++GC P
Sbjct: 325 STGRWMDAERL---LSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N+ ++ ++ C D+A + + V PD T L+ L K K+ A ++
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441
Query: 366 RTIKKKFPPNVLRAWKKVEEEL 387
+ K VL + V + L
Sbjct: 442 NQLSSKGCSPVLITYNTVIDGL 463
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++RS G + A R M G SV++FN L+ R RL + + +++PK +
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK-H 377
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY LL C D+A+E L M ++G VTY T+L L K G + A
Sbjct: 378 GCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAA 437
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +++ KG + YN I T G E EL++EMR GLKPD I+Y+ L+
Sbjct: 438 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRG 497
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +DEA K++ +E P+A T+ + LC + +A V P
Sbjct: 498 LGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 557
Query: 342 FNTVKLLVEGL 352
T +L+EG+
Sbjct: 558 EATYTILIEGI 568
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 157/353 (44%), Gaps = 24/353 (6%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ-------DLTVRRLAKSKRFS 79
SVS SKL++ + + S+VSK AS ++ R Q DL V + S
Sbjct: 39 SVSHHFSKLKATRSRKRLENRVSAVSKSEASGLNGRLQQIVSTPNGDLNVIGMESSP--- 95
Query: 80 DIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
+ ++ + +L L+R+ G + ++ ++M G VI+ +L+
Sbjct: 96 ---IGVNGSRSFEEFASNIHLRKLVRN----GELEEGLKFLERMIYQGDIPDVIACTSLI 148
Query: 140 FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
RS K + EI + PD I+Y +L+ +C SG DKALE+L M V
Sbjct: 149 RGFCRSGKTKKATRIM-EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---V 204
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLK 257
VTY T+L L G +EA + ++ DV Y + I T G + +K
Sbjct: 205 APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK 264
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L+DEMR G KPD ++YN L+ CK +DEA K + GC PN T + +
Sbjct: 265 -LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
C +G + A ++ + + P T +L+ L +K+ + A V+ + K
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 376
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 11/281 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++RS +G AM D+ + VI++ L+ A + L DE+ KK
Sbjct: 214 ILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK- 272
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y +L+ C G D+A++ LN M + G + +T+ +L + G +A
Sbjct: 273 GCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDA 332
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-----NTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
ERL S+M +KG V +N+ I G R +++++M G P+++SYN
Sbjct: 333 ERLLSDMLRKGCSPSVVTFNILINFLCRKRLLG----RAIDVLEKMPKHGCVPNSLSYNP 388
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +C+ + MD A + E + GC P+ T+ T + LC G D A ++ +
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P T +++GL K K + A ++ +++K P+++
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDII 489
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 12/278 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEP 98
D+A+ +++ + P + ++ +R + + R+ D E L+ P +
Sbjct: 295 DEAIKFLNNMPSYGCKP--NVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L N + + + A+ ++M + G + +S+N LL + + D+ I + EI
Sbjct: 353 ILINFL---CRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRA-IEYLEI 408
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
PD ++Y LL + C G D A+E+LN++ +KG +TY TV++ L K G
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 219 AEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
E A L EM +KG+ D+ Y+ +R G E +K + +M +KP ++YN
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIK-IFHDMEGLSIKPSAVTYN 527
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+M CK + A + E GC P T+ I
Sbjct: 528 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 137/265 (51%), Gaps = 5/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
I YG++G A+ TF++M G ++++ NA L++ ++ + +F + K
Sbjct: 441 FIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDI 499
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD ++Y +++K + G D+A++LL+EM E + +++N LYK +EA
Sbjct: 500 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEA 559
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ M++ + V YN + G + EL + M G P+TI++N L C
Sbjct: 560 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 619
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-SVMVHKIP 340
CKN+ + A K+ + + GC P+ T+ T I+ L +G +A F + +V+ P
Sbjct: 620 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY--P 677
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
DF T+ L+ G+VK I++A +I
Sbjct: 678 DFVTLCTLLPGVVKAGLIEDAYKII 702
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 148/311 (47%), Gaps = 17/311 (5%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +C L+R + D A+ FD M+ LG + ++ ++F + D V L
Sbjct: 402 TYNTLICGLLRVH----RLDDALEIFDNMESLGVKPTAYTY--IVFIDYYGKSGDSVSAL 455
Query: 155 --FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
F+++ K ++P+ ++ L S +G +A ++ +++ G+ +VTY ++ C
Sbjct: 456 ETFEKMKTK-GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLK 269
K G +EA +L SEM + + DV N I Y D R+ E + M++ LK
Sbjct: 515 YSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKAD--RVDEAWKMFMRMKEMKLK 572
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P ++YN L+ KN + EA +++EG+ + GC PN TF T LC + A K+
Sbjct: 573 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 632
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGL 389
+ + + +PD T ++ GLVK ++KEA +KK P+ + + G+
Sbjct: 633 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP---GV 689
Query: 390 VPAPAVGDGQK 400
V A + D K
Sbjct: 690 VKAGLIEDAYK 700
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 85 IESHKNDPK-ITQEPYLCNLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFAC 142
+ +H+ +P IT + L++ AG D A+ + D M + + ++ L+
Sbjct: 848 MSAHECEPNTITHNIVISGLVK----AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 903
Query: 143 TRS-RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
++S RLY+ + E Y P+ Y +L+ +G +D A L M +GV
Sbjct: 904 SKSGRLYEAKQLF--EGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE--- 258
TY+ +++CL G +E + E+++ G++ DV YN+ I G RL+E
Sbjct: 962 DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGL--GKFHRLEEALV 1019
Query: 259 LIDEMRDA-GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L +EM+ + G+ PD +YN L+ M++EA K+Y ++ G PN TF I
Sbjct: 1020 LFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1079
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
SG + AY V++ V P+ T + L
Sbjct: 1080 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 126/276 (45%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG++G D + +M + I+ N ++ ++ D L+ ++
Sbjct: 828 LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ SP +YG L+ SG +A +L M + G Y ++N K G A+ A
Sbjct: 888 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAA 947
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ M K+GV D+ Y+V + G + E++++GL PD + YN ++
Sbjct: 948 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIING 1007
Query: 282 YCKNEMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K ++EA ++ ++++ G +P+ T+ + I +L +G ++A K++ E P
Sbjct: 1008 LGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1067
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
+ T L+ G K + A V +T + F PN
Sbjct: 1068 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1103
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 12/274 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS----RLYDKVPILFDE 157
+L+ G+ + M +M+ LG +V +F + R+ Y+ + + DE
Sbjct: 230 SLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE 289
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
PD ++Y +L+ + C + D A E+ +M+ + VTY T+L+
Sbjct: 290 -----GCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNR 344
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISY 275
+ + + WSEMEK G DV + + + G E +L D MRD G+ P+ +Y
Sbjct: 345 DLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKL-DVMRDQGILPNLHTY 403
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ + +D+A ++++ +E G P A T+ +I + SG+ A + F++
Sbjct: 404 NTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 463
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
P+ + L K + +EAK + +K
Sbjct: 464 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 497
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 45/300 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ G+ G A+ F+ M + G P + I+FN L F C D+V + + K
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL-FDCLCKN--DEVTLALKMLFKMM 637
Query: 163 NLS--PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ PD +Y ++ +G +A+ ++M+ K V VT T+L + K G E
Sbjct: 638 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIE 696
Query: 221 EAERL----------------W-----SEMEKKGVDLDVAAYNVRITNTYGGDPERL--- 256
+A ++ W S + + G+D V+ + N D + +
Sbjct: 697 DAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 756
Query: 257 --------------KELIDEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ L ++ +D G++P +YN L+ + +M++ A+ V+ ++
Sbjct: 757 IIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNT 816
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC P+ T+ + SG D+ ++++KE P+ T +++ GLVK + +A
Sbjct: 817 GCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDA 876
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 17/262 (6%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV-----PILFDEIPKKYNLS 165
G AM F QM +L P ++ LL ++ L + L+ + NL
Sbjct: 659 GQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLF 717
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKG--VEVTTVTYTTVLNCLYKQGNAEEAE 223
+ + +L ++ D+ S + N + G + V + Y+ +K NA A
Sbjct: 718 WEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS------FKHNNASGAR 771
Query: 224 RLWSEMEKK-GVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ + K GV + YN+ I D E +++ ++++ G PD +YNFL+
Sbjct: 772 MLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDA 831
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-P 340
Y K+ +DE ++Y+ + + C PN T I L +GN D A ++ + + P
Sbjct: 832 YGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 891
Query: 341 DFNTVKLLVEGLVKKKKIKEAK 362
T L++GL K ++ EAK
Sbjct: 892 TACTYGPLIDGLSKSGRLYEAK 913
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 1/203 (0%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++ + SY L+ S +A+E+ M G + TY++++ L K+ +
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E L EME G+ +V + + I G E++ M D G PD ++Y L
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 301
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C +D AK+V+ ++ P+ T+ T + + + D + + E
Sbjct: 302 IDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGH 361
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
+PD T +LV+ L K EA
Sbjct: 362 VPDVVTFTILVDALCKAGNFGEA 384
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 137/347 (39%), Gaps = 45/347 (12%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A + ++ LAK+ R + + + K+ + +++ Y + G D A++ +M
Sbjct: 472 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 531
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
E VI N+L+ ++ D+ +F + K+ L P ++Y LL +G
Sbjct: 532 VENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVVTYNTLLAGLGKNGK 590
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+A+EL M KG T+T+ T+ +CL K A ++ +M G DV YN
Sbjct: 591 IQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNT 650
Query: 244 RITNTYGG-------------------DPERLKELIDEMRDAGLKPDT--ISYNFLMTC- 281
I D L L+ + AGL D I NFL +C
Sbjct: 651 IIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCA 710
Query: 282 ------YCKNEM--------MDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKA 326
+ ++ M +D A E L NG C + I + N A
Sbjct: 711 DQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGA 770
Query: 327 YKVF----KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+F K+ + K+P +N LL+ GL++ I+ A+ V +K
Sbjct: 771 RMLFEKFTKDLGVQPKLPTYN---LLIGGLLEADMIEIAQDVFLQVK 814
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G ++ + + M+ + ++ T TY T+ CL +G +A +M + G L+ +Y
Sbjct: 134 GKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSY 193
Query: 242 NVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N I E+ M G +P +Y+ LM K ++ + + +E
Sbjct: 194 NGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMET 253
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G PN TF I L +G ++AY++ K PD T +L++ L +K+
Sbjct: 254 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 313
Query: 361 AKGVIRTIK 369
AK V +K
Sbjct: 314 AKEVFAKMK 322
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 1/172 (0%)
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPE 254
N + TT T +L L G EE ++ M+K+ + D Y + + G
Sbjct: 113 NSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLR 172
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ + +MR+ G + SYN L+ K+ EA +VY + +G P+ T+ + +
Sbjct: 173 QAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLM 232
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
L + + + KE + P+ T + + L + KI EA +++
Sbjct: 233 VGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 284
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 141/326 (43%), Gaps = 75/326 (23%)
Query: 109 QAGMFDHAMRTFDQMDELGTPR-SVISFNALLFACTRSRLYDKVPILFDEIPKK------ 161
QAG D A R D+M+ LGT V+++N L AC + R L +E+ +K
Sbjct: 321 QAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATL 380
Query: 162 --YN--------------------------LSPDKISYGLLLKSHCDSGSSDKALELLNE 193
+N L+PD I+Y L+ +HC +G+ KA L++E
Sbjct: 381 VTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDE 440
Query: 194 MENKGVEVTT-----------------------------------VTYTTVLNCLYKQGN 218
M +G+++ T V+Y TV+ +K+ N
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISY 275
+E A RLW EM +K + ++ YN I RLKE ID E+ + GL PD +Y
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGL--SRMGRLKEAIDKLNELMEKGLVPDDTTY 558
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ YCK ++ A + + + EN P+ T T + LC +G DKA K+F+ V
Sbjct: 559 NIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVE 618
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
K D T L++ + K + A
Sbjct: 619 KGKKVDVITYNTLIQTMCKDGDVDTA 644
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 10/294 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ +AG A D+M G + N +L+ + + Y++ L P++
Sbjct: 421 LIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQR- 479
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD++SYG ++ ++ +S+ AL L +EM K + + TY T++ L + G +EA
Sbjct: 480 GFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEA 539
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+E+ +KG+ D YN+ I + Y GD E + ++M + KPD ++ N LM
Sbjct: 540 IDKLNELMEKGLVPDDTTYNI-IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMN 598
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C N +D+A K++E E G + T+ T I +C G+ D A F + P
Sbjct: 599 GLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQP 658
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR------TIKKKFPPNVLRAWKKVEEELG 388
D T +++ L + + +EA+ ++ T+ + F +L+ E E G
Sbjct: 659 DAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESG 712
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 139/319 (43%), Gaps = 3/319 (0%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL S++ SP + Y L + + L+ K D P L
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAH--CRKGMLGEARALLARMKKDGVAPTRPTYNTL 280
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
+ +Y + G A + + M G + ++N L ++ D+ L DE+ +
Sbjct: 281 VSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGT 340
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L PD ++Y L + S AL LL EM KGV+ T VT+ V+ L K G E A
Sbjct: 341 LLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGAL 400
Query: 224 RLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
++M G+ DV YN I + G+ + L+DEM GLK DT + N ++
Sbjct: 401 GCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNL 460
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK + +EA+ + + + G P+ ++ T + N + A +++ E + P
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSI 520
Query: 343 NTVKLLVEGLVKKKKIKEA 361
+T L++GL + ++KEA
Sbjct: 521 STYNTLIKGLSRMGRLKEA 539
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 141/323 (43%), Gaps = 39/323 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K KR+ + + L++S + E ++ +Y + + A+R +D+M E S
Sbjct: 460 LCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPS 519
Query: 132 VISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++N L+ +R RL + + L + + K L PD +Y +++ ++C G + A +
Sbjct: 520 ISTYNTLIKGLSRMGRLKEAIDKLNELMEK--GLVPDDTTYNIIIHAYCKEGDLENAFQF 577
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTY 249
N+M + VT T++N L G ++A +L+ +KG +DV YN I T
Sbjct: 578 HNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCK 637
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC------ 303
GD + +M GL+PD +YN +++ + +EA+ + L E+G
Sbjct: 638 DGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFS 697
Query: 304 SP-----------------------------NATTFRTWIYHLCGSGNFDKAYKVFKESV 334
SP + + + LC SG F +A + E +
Sbjct: 698 SPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMM 757
Query: 335 MVHKIPDFNTVKLLVEGLVKKKK 357
D +T L+EGLVK++K
Sbjct: 758 QKGMSVDSSTYITLMEGLVKRQK 780
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L P+ ++ LL+ +HC G+ AL L+ M+ G+ VTY T+LN ++G EA
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L + M+K GV YN + + Y G ++ ++++ M G +PD +YN L
Sbjct: 260 ALLARMKKDGVAPTRPTYNT-LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAG 318
Query: 282 YCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ +DEA ++ + +E G P+ T+ T A ++ +E
Sbjct: 319 LCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKA 378
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
T ++++GL K +++ A G +
Sbjct: 379 TLVTHNIVIKGLCKDGELEGALGCL 403
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 160/347 (46%), Gaps = 5/347 (1%)
Query: 20 STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFS 79
T ++++ + + E D D AL++ ++ H P + Y + ++ L ++R+
Sbjct: 72 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNY--NTVLKGLCSAERWG 129
Query: 80 DIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
D + L+ + E +I S + G+ A++ ++M + G +++++NA++
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189
Query: 140 FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
R D L ++ K Y PD ++Y LLK C + A EL++ M G
Sbjct: 190 NGLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGC 248
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKE 258
VT+ T++ L ++G +A ++ +M KG + Y+ I+ ++ E
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 308
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L +EM G PD I Y L C ++ ++EA + L+++G SP+ + + LC
Sbjct: 309 LFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLC 367
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+G + A + V +PD T +L+EGL + + EA+ ++
Sbjct: 368 RNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 136/310 (43%), Gaps = 38/310 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A+ D M G V+++N LL A + R Y + L D + +
Sbjct: 13 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID-LMRAE 71
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL------------ 210
+P+ ++Y +L+ C G D ALELL + + G + +TV Y TVL
Sbjct: 72 GCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDA 131
Query: 211 ----------NC-------------LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
NC L ++G ++A +L +M K G ++ YN I
Sbjct: 132 DELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 191
Query: 248 TYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + L+ +M+ G KPD ++YN L+ C +A+++ + + +NGC P+
Sbjct: 192 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPD 251
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF T I LC G A +VFK+ P+ T ++ GL K K+ +A +
Sbjct: 252 NVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFN 311
Query: 367 TI-KKKFPPN 375
+ K F P+
Sbjct: 312 EMGHKGFNPD 321
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 131/267 (49%), Gaps = 18/267 (6%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ + G S +++N +L + + L E+ ++ N P++ +
Sbjct: 91 GDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE-NCPPNEAT 149
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ +++ S C G +A++LL +M G VTY ++N L +Q N + A L S+M+
Sbjct: 150 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK 209
Query: 231 KKGVDLDVAAYNVRITNTYGG----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
G D+ YN + D E EL+D M G PD +++N L+ C+
Sbjct: 210 SYGCKPDIVTYNTLLKGLCSAARWVDAE---ELMDNMTQNGCLPDNVTFNTLIGFLCQKG 266
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN--- 343
+M +A +V++ + + GC+PN+ T+ T I L + D+A ++F E M HK FN
Sbjct: 267 LMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNE--MGHK--GFNPDK 322
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+LL E L I+EA I+T++K
Sbjct: 323 IYQLLAECLNDDDTIEEA---IQTVRK 346
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P+ +Y L+ + C+ G AL +L++M +G VTY +L K +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L M +G + YNV + G GD + EL+ + G KP T++YN ++
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 283 CKNEMMDEAKK-VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C E +A + V E L EN C PN TF IY LC G +A ++ ++ +
Sbjct: 123 CSAERWGDADELVTEMLREN-CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++ GL +++ + A G++ +K
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMK 209
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LK 257
V+ TY +++ L ++G +A + +M +G DV YN+ + T G R
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
ELID MR G P+ ++YN LM C +D+A ++ L +GC P+ + T + L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
C + + A ++ E + + P+ T +++ L +K +++A ++ + K
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSK 175
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 132/273 (48%), Gaps = 4/273 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LIR A D A+ ++M E G +V+ ++ LL ++ ++ V +F+E+ +
Sbjct: 134 TLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGR 193
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD + Y L+ S C G KA +++ M +G+E VTY ++N + K+G+ E
Sbjct: 194 -GIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVRE 252
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMR--DAGLKPDTISYNFL 278
A L M +KGV DV YN IT + + L++EM + ++PD +++N +
Sbjct: 253 ALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSV 312
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK M +A +V + ENGC N F I L KA ++ E
Sbjct: 313 IHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGL 372
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +L+ G K ++++ A+ + ++ +
Sbjct: 373 QPDSFTYSILINGFCKMRQVERAESYLSEMRHQ 405
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 9/261 (3%)
Query: 111 GMFDHAM---RTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSP 166
G D A+ R L + + IS+ L+ A C R V +L + + P
Sbjct: 70 GCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSM--QDCGVRP 127
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D ++YG L++ CD+ D A+ELLNEM G+E V Y+ +L+ K G E +++
Sbjct: 128 DVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVF 187
Query: 227 SEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
EM +G++ DV Y I + G ++ ++D M + GL+P+ ++YN L+ CK
Sbjct: 188 EEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKE 247
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM--VHKIPDFN 343
+ EA + + + E G P+ T+ T I L D+A + +E + PD
Sbjct: 248 GSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLM 307
Query: 344 TVKLLVEGLVKKKKIKEAKGV 364
T ++ GL K +++A V
Sbjct: 308 TFNSVIHGLCKIGWMRQALQV 328
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 92 PKITQEPYLCNLIR-SYGQAGM-FDHAMRTFDQ------MDELGTPRSVISFNALLFACT 143
P PYL L+R G+A + +R + L + R +S+N +L A
Sbjct: 8 PPRRAAPYLAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALC 67
Query: 144 RSRLYDKVPILFDEIPKKYNLS--PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
R D L + + L+ P+ ISY L+++ C + +A+ LL M++ GV
Sbjct: 68 RQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRP 127
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
VTY T++ L + + A L +EM + G++ +V Y+ + G E + ++
Sbjct: 128 DVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVF 187
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+EM G++PD + Y L+ C++ + +A +V + + E G PN T+ I +C
Sbjct: 188 EEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKE 247
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
G+ +A + K PD T L+ GL ++ EA ++ + +
Sbjct: 248 GSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + G A++ M E G ++++FN L+ R K L DE+
Sbjct: 311 SVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASS 370
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+ C ++A L+EM ++G+E V Y +L + QG +
Sbjct: 371 -GLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQ 429
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L++EM++ LD AAY+ I + G+ + +E + +M D GL PD ++Y+ +
Sbjct: 430 ARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPIN 488
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ K+ + A++V + + +G P+ F + I G+ +K ++ +E
Sbjct: 489 MFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTRE 540
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 52/300 (17%)
Query: 79 SDIETLIESHKNDPKITQEP----YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+D++T +E + EP Y C L+ Y + G ++ + F++M G V+
Sbjct: 143 ADVDTAVELLNEMCESGIEPNVVVYSC-LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVM 201
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+ AL+ + R K + D + ++ L P+ ++Y +L+ S C GS +AL+L M
Sbjct: 202 YTALIDSLCRHGKVKKAARVMDMMTER-GLEPNVVTYNVLINSMCKEGSVREALDLRKNM 260
Query: 195 ENKGVEVTTVTYTT-------------------------------------VLNCLYKQG 217
KGV+ VTY T V++ L K G
Sbjct: 261 SEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIG 320
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-----DPERLKELIDEMRDAGLKPDT 272
+A ++ + M + G ++ A+N+ I GG ++ EL+DEM +GL+PD+
Sbjct: 321 WMRQALQVRAMMAENGCRCNLVAFNLLI----GGLLRVHKVKKAMELMDEMASSGLQPDS 376
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+Y+ L+ +CK ++ A+ + G P + + +C G +A +F E
Sbjct: 377 FTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE 436
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 111/285 (38%), Gaps = 36/285 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK-K 161
LI S + G A+ M E G V+++N L+ + D+ L +E+ + +
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +++ ++ C G +AL++ M G V + ++ L + ++
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKK 359
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L EM G+ D Y++ I ER + + EMR G++P+ + Y L+
Sbjct: 360 AMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLK 419
Query: 281 CYCKNEMMDEAKKVYEGLEEN----------------------------------GCSPN 306
C MM +A+ ++ ++ N G P+
Sbjct: 420 AMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPD 479
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
A T+ I SG+ A +V K+ +PD L++G
Sbjct: 480 AVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQG 524
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 7/176 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + + A +M G + + LL A + + LF+E+ +
Sbjct: 382 LINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNC 441
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D +Y ++ SG A E L +M ++G+ VTY+ +N K G+ A
Sbjct: 442 KL--DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAA 499
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEM--RDAGLKPDTIS 274
ER+ +M G DVA ++ I YG GD E++ EL EM +D L P IS
Sbjct: 500 ERVLKQMTASGFVPDVAVFDSLIQG-YGAKGDTEKILELTREMTAKDVALDPKIIS 554
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 16/313 (5%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R L S+R + L+ S + LIR A D A+ D+M G
Sbjct: 129 VMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSG 188
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+V+ ++ LL RS + V +F+++ ++ + PD I + L+ C G + KA
Sbjct: 189 VQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRR-GIKPDVIMFTGLIDDLCKEGKTGKA 247
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++ + M +G+E VTY ++N L K+G+ EA L EM+ KGV DV YN I
Sbjct: 248 AKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAG 307
Query: 248 TYGG-DPERLKELIDEM--RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G + + ++EM D ++PD +++N ++ CK M +A KV E + E GC
Sbjct: 308 LSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCM 367
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI------PDFNTVKLLVEGLVKKKKI 358
N T+ I G F + +KV ++ ++ PD T +L+ G K ++
Sbjct: 368 CNLVTYNYLI------GGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEV 421
Query: 359 KEAKGVIRTIKKK 371
A+ + T++++
Sbjct: 422 DRAEKFLCTMRQR 434
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 3/232 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + G A++ + M E G +++++N L+ R L DE+
Sbjct: 340 SVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAIS 399
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+ D+A + L M +G++ Y +L + +QG E
Sbjct: 400 -GLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMER 458
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L++EM+K LD AY+ I GD + +K+LI +M D GL PD ++Y+ L+
Sbjct: 459 AMGLFNEMDKN-CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLIN 517
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
Y K ++EA++V + + +G P+ F + I G DK K+ E
Sbjct: 518 MYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHE 569
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 5/237 (2%)
Query: 130 RSVISFNALLFACTR---SRLYDKVPILFDEIPKKYNLS-PDKISYGLLLKSHCDSGSSD 185
R +S+N +L A R L +L D + + + P+ +SY +++ C S +
Sbjct: 81 RDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTG 140
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A+ LL M+ GV VTY T++ L + A L EM GV +V Y+ +
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200
Query: 246 TN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G + + ++ ++M G+KPD I + L+ CK +A KV + + + G
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
PN T+ I LC G+ +A + KE PD T L+ GL ++ EA
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEA 317
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 132/287 (45%), Gaps = 14/287 (4%)
Query: 113 FDHAMRTFDQM---DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDK 168
D AM ++M D + P V++FN+++ C R+ V + E+ + +
Sbjct: 314 MDEAMSFLEEMIQGDTVVEP-DVVTFNSVIHGLCKIGRMTQAVKV--REMMAERGCMCNL 370
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y L+ A+ L++E+ G+E + TY+ ++N K + AE+
Sbjct: 371 VTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCT 430
Query: 229 MEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDEM-RDAGLKPDTISYNFLMTCYCKNE 286
M ++G+ ++ Y + G ER L +EM ++ GL D I+Y+ ++ CK+
Sbjct: 431 MRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL--DAIAYSTMIHGACKSG 488
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
M K++ + + + G +P+A T+ I G+ ++A +V K+ +PD
Sbjct: 489 DMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFD 548
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKK---FPPNVLRAWKKVEEELGLV 390
L++G + + + +I ++ K F P ++ ++ ++ L+
Sbjct: 549 SLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIRLPQQTPLL 595
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G + M E G FN + A + + D+ +F+++ K+
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM-KQQ 407
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD +++G L+ + C G D A+ N+M N+GV + +++ L E+A
Sbjct: 408 GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + EM +G+ DV +N + N G + + LID M G +PD ISY L+
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGG 527
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C +DEA K + + G P+ T+ T ++ C +G D AY VF+E + P
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL ++ EAK
Sbjct: 588 VVTYSTILHGLFTTRRFSEAK 608
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 138/280 (49%), Gaps = 3/280 (1%)
Query: 94 ITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
++ + ++ N+I +Y + M D AM F++M + G V++F AL+ A + D
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAV 433
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+ F+++ + ++P+ + L+ C +KA E EM N+G+ V + T+L
Sbjct: 434 LKFNQMMNE-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPD 271
L +G +A+RL ME+ G DV +Y I + G + + +D M GLKPD
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+YN L+ YC+ +D+A V+ + NG +P T+ T ++ L + F +A +++
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ K + +++ GL K + EA + +++ K
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 162/399 (40%), Gaps = 55/399 (13%)
Query: 29 SKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS-RYAQDLTVRRLAKSKRFSDIET---- 83
S+A+S D AL ++ + H A P S + LT +R S E+
Sbjct: 21 SRARS---GSLGLDDALKLFDGLLTH-ARPASIIAFNHLLTAVSRVSGRRSSTTESELVV 76
Query: 84 -LIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
L + I P LC LI + + G +H TF + + G + I N LL
Sbjct: 77 SLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLL 136
Query: 140 FA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN------ 192
C RL + + IL +P+ +PD +SY LLK C+ +++ALELL+
Sbjct: 137 KGLCDAKRLREAMDILIKRMPE-LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQ 195
Query: 193 --------------------------------EMENKGVEVTTVTYTTVLNCLYKQGNAE 220
EM ++G++ VTYTTV++ L K +
Sbjct: 196 GRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVD 255
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE ++ +M KGV D YN I G + + +++EM GLKPD +Y L+
Sbjct: 256 RAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLL 315
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C N EA+ ++ + G PN + I+ G + + + V
Sbjct: 316 NYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS 375
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD + ++ KK I EA + +K++ P+V+
Sbjct: 376 PDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 165/401 (41%), Gaps = 44/401 (10%)
Query: 16 AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
+ G S + +S + + +E DKA +++ + P Y + L K+
Sbjct: 194 SQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT--VIDGLCKA 251
Query: 76 KRFSDIETLIESHKN-DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+ E + + + K + Y C LI Y G + +R ++M G +
Sbjct: 252 QVVDRAEGVFQQMIDKGVKPDNDTYNC-LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310
Query: 135 FNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS---------- 183
+ +LL + C R + FD + +K + P+ YG+L+ + G+
Sbjct: 311 YGSLLNYLCNNGRCRE-ARFFFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Query: 184 -------------------------SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
D+A+ + N+M+ +G+ V + +++ L K G
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
++A +++M +GV ++ +N + D E+ KE EM + G++PD + +N
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C + +A+++ + +E G P+ ++ T I C G D+A K + V
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD T L+ G + +I +A GV R ++ P V+
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 142/331 (42%), Gaps = 6/331 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ I++ + + SP + + L K R D N+
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNFGA--LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L+ ++ A + +M G V+ FN +L CT+ ++ ++ ++ +
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI--DLME 510
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD ISY L+ HC G D+A + L+ M + G++ TY T+L+ + G +
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
+A ++ EM + G+ V Y+ + + KEL M +G + + YN ++
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
KN +DEA K+++ L TTF I L SG + A +F +
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T L+ E L+++ ++E + ++K
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEK 721
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 45/296 (15%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TV + K+K F E L + + D + LCNL G A R D M+ +G
Sbjct: 460 TVDKWEKAKEFY-FEMLNQGIRPDV-VFFNTILCNLC----TKGQVMKAQRLIDLMERVG 513
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
T VIS+ L+ C R+ + L ++ L PD+ +Y LL +C +G D
Sbjct: 514 TRPDVISYTTLIGGHCLVGRIDEAAKSL--DVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLY-------------------KQGN--------- 218
A + EM G+ VTY+T+L+ L+ KQ N
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 219 -------AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
+EA +L+ + K L++ +N+ I + G E L + GL P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
D +Y + + ++E ++ +E++G +PN+ + L G+ +A
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 171/365 (46%), Gaps = 12/365 (3%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASP-VSSRYAQDLTVRRLAKSKRFSDI 81
+ +I+ S+ +R+E D +K++ ++ S + YA+ V + + V RL + +F
Sbjct: 11 SKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAA 70
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG---TPRSVISFNAL 138
E LI K + + E L ++ R YG+ ++R F +M + + ++ ++ A+
Sbjct: 71 EDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAI 130
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC-DSGSSDKALELLNEMENK 197
L + L K F + ++ L P S +L+K+ C + G+ D L++ EM +
Sbjct: 131 LVEENQLNLAFK----FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERL 256
G + + TY T+++ L + G +EA++L++EM +K V Y I G + +
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
++EM+ G++P+ +Y+ LM CK+ +A +++E + GC PN T+ T I
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
LC +A ++ + PD ++ G K +EA + I PN
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 366
Query: 376 VLRAW 380
L W
Sbjct: 367 RL-TW 370
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 7/312 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
++ ++ +R A+++R D T E K L+ +AGM + A F +
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214
Query: 123 MDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M +G P A++ +++ + +F ++ +K PD I+Y ++ +
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKA 273
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G + +AL++L+ M K T VTY ++N L K G E AE L+ M G + Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 242 NVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
I R+KE L DEM +AG +PD I++ ++ CK+ ++A K +E +
Sbjct: 334 TSLIHGF--AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
GC PN T+ T I L G A+++ K + PD T L++G K ++
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 359 KEAKGVIRTIKK 370
EA ++ + K
Sbjct: 452 DEAAQLLDELDK 463
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R+ +A A F QM++ G P I++N ++ ++ + + D + K
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +++YG+L+ S C +G+ ++A EL M G +V YT++++ K G +EA
Sbjct: 291 CV-PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ EM + G DV + V I G+ E+ + +EM G KP+ ++Y ++
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + A ++ +G+ +GC P++ T+ + C G D+A ++ E P+
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 342 FNTVKLLVEGLVKKKKIKE 360
LV GL +++
Sbjct: 470 LQLYSSLVNGLCDGGSVEK 488
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 40/295 (13%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
++M + G + SFN L+ + R+R D F EI K+ PD ++ +L+ C
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF-EIMKRKRCKPDLHTFLILVDCLCK 201
Query: 181 SGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G +KA E+ +EM G V +T ++ L K +EA ++ +MEK G D
Sbjct: 202 AGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261
Query: 240 AYNVRITN---------------------------TYG---------GDPERLKELIDEM 263
AYN I TYG G ER +EL M
Sbjct: 262 AYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+G +P+++ Y L+ + K+ M EA +++ + E G P+ T I LC SGNF
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
++A K F+E + P+ T +++GL K ++ A +++ + FP +V
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 5/298 (1%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
++ L E K + C++I + G D A R F +M G ++N L+
Sbjct: 490 LDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILIN 549
Query: 141 ACTRSR--LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
RSR ++ L ++ K L PD ++Y L C G D+A+++L E ++G
Sbjct: 550 GLCRSRENRVERAFALLHDLEKVGYL-PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLK 257
V YT + L QG + A L+ EM ++G D AAY I E
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDAC 668
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYH 316
+ DEM G KP +Y L+ C +DEA +E + G + + I+
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHG 728
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
C + D A K+F++ + +P T L +GLV+ K ++A+ +++ + P
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 7/265 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I+ + G +A R M G P SV L C RL D+ L DE+
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL-DEAAQLLDEL-D 462
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE-VTTVTYTTVLNCLYKQGNA 219
K + SP+ Y L+ CD GS +K L+ L E E + +++ L K G
Sbjct: 463 KCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRL 522
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN---TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+EA R++ M +G D YN+ I + ER L+ ++ G PD ++Y
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYT 582
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L CK +D A K+ E G + + + LC G D+A +F+E V
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
PD ++ GL+K KK+++A
Sbjct: 643 GGAPDAAAYCCIINGLIKVKKLEDA 667
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 5/264 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + ++G A FD+M E G VI+ ++ +S +++ F+E+ +
Sbjct: 335 SLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRG 394
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++Y +++ G A ++ M G +VTY +L+ K G +E
Sbjct: 395 -GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPER-LKELIDEMRDAGLKPDTISYNFLM 279
A +L E++K ++ Y+ + GG E+ L +L ++ + A D ++
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSII 513
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS--GNFDKAYKVFKESVMVH 337
CK +DEA ++++ + GC P+ATT+ I LC S ++A+ + + V
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVG 573
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEA 361
+PD T L GL K ++ A
Sbjct: 574 YLPDAVTYTPLCIGLCKIGEVDRA 597
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 159 PKKYNLSPDKISYGLLLKSHCDS-------GSSDKALELLNEMENKGVEVTTVTYTTVLN 211
P++ +L+PD + L+ S ++ GSS + N + +V VL
Sbjct: 35 PEREHLTPDFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLR 94
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
L G A R W+ E+ G DV YN + + + + +EM AG+ P
Sbjct: 95 SLKVTGTAISFFR-WAG-EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAP 152
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+T S+N L+ + + D+A +E ++ C P+ TF + LC +G +KA++VF
Sbjct: 153 NTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVF 212
Query: 331 KESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
E + + + PD +V L+K K++KEA+ V ++K FPP+ +
Sbjct: 213 HEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 118/269 (43%), Gaps = 10/269 (3%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y+C L+ + + G D A + D++D+ + ++ +++L+ +K D++
Sbjct: 438 YIC-LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKT---LDDL 493
Query: 159 PKKYNLSPDKISYGL---LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CL 213
++ + + + GL ++ C +G D+A + M ++G + TY ++N C
Sbjct: 494 FEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCR 553
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDT 272
++ E A L ++EK G D Y + I G+ +R ++++E G D
Sbjct: 554 SRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADV 613
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++Y L T C +D A +++ + G +P+A + I L + A K F E
Sbjct: 614 VAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDE 673
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + P T LV+ L + EA
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEA 702
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 124/303 (40%), Gaps = 23/303 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR------FSDIETLIESHKNDPKIT 95
D+A I+ + P ++ Y ++ + L +S+ F+ + L + +T
Sbjct: 523 DEACRIFQRMVSEGCKPDATTY--NILINGLCRSRENRVERAFALLHDLEKVGYLPDAVT 580
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
P L + G D A++ ++ G V+++ AL D+ LF
Sbjct: 581 YTPLCIGLCK----IGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
E+ ++ +PD +Y ++ + A + +EM KG + T TYT ++ L
Sbjct: 637 QEMVRQGG-APDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCH 695
Query: 216 QGNAEEAERLWSEMEKKG-VDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLK 269
GN +EA + M +G + V Y+ I G + LK +L ++M G
Sbjct: 696 AGNVDEAFHRFESMLARGELVGSVMIYDALIH----GFCKALKVDAALKLFEDMISRGNV 751
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P ++ L ++ ++A+++ + + G P+A TF + L S K K+
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811
Query: 330 FKE 332
+E
Sbjct: 812 VQE 814
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 162/345 (46%), Gaps = 11/345 (3%)
Query: 27 SVSKAKSKLRSEFDPDKALDI--YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
S ++ + + S+ DP A +I Y+S+ ++ S+ + + + +SK FS ++ L
Sbjct: 41 SPTRVQKLIASQSDPLLAKEIFDYASLQPNFRHNYSTYL---ILILKFGRSKHFSLLDDL 97
Query: 85 IESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
+ K++ P L + LI+ YG+A + D A+ TF M + N +L
Sbjct: 98 LRRLKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILV 157
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R Y + + K+ + PD SY +L+++ C +G A L N+M + V
Sbjct: 158 SHRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDI 217
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LI 260
+Y ++ L ++ A L+ +M KG D Y + + ++L+E L+
Sbjct: 218 QSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSL--CRKKKLREAYKLL 275
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
M+ G PD + YN ++ +C+ +A KV + ++ NGC PN ++RT + LC
Sbjct: 276 CRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHL 335
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
G D+A K +E + P F + LV+G +I+EA GV+
Sbjct: 336 GMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVL 380
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 244 RITNTYGGDPERLKELIDEMRDA---GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
RI + L+ D +DA G+ PDT SYN LM +C N + A ++ + +
Sbjct: 151 RILDILVSHRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFK 210
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
P+ ++R + LC + A +F++ + +PD T L+ L +KKK++E
Sbjct: 211 RDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLRE 270
Query: 361 AKGVIRTIKKK 371
A ++ +K K
Sbjct: 271 AYKLLCRMKVK 281
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 143/324 (44%), Gaps = 47/324 (14%)
Query: 101 CNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CNL I + G D + ++ G ++S+NA+L ++ + V L DE+
Sbjct: 189 CNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMV 248
Query: 160 K---------KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
K ++ +PD Y ++ C G + A E+L+ M + G++ V Y TVL
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVL 308
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
+ E+AE L +EM +K LD +N+ + G +R+ EL+++M + G
Sbjct: 309 KGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCM 368
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLE------------------------------ 299
PD I+Y ++ +CK ++DEA + + +
Sbjct: 369 PDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEEL 428
Query: 300 -----ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ GC PN TF T I LC G ++A ++ K+ ++ PD + +++GL K
Sbjct: 429 MSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGK 488
Query: 355 KKKIKEAKGVIRT-IKKKFPPNVL 377
K +EA ++ I K PNV+
Sbjct: 489 AGKTEEALELLNVMINKGITPNVI 512
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + Q G+ D + +QM E G VI++ ++ + L D+ +L +P
Sbjct: 342 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPS-C 400
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ISY ++LK C + A EL++ M +G VT+ T++N L K+G E+A
Sbjct: 401 GCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQA 460
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M G + D+ +Y+ I G E EL++ M + G+ P+ I+Y+ +
Sbjct: 461 IELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFA 520
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +D+ ++++ +++ +A + I LC D A V +P+
Sbjct: 521 LAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPN 580
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI 365
+T L++GL + + EA+ ++
Sbjct: 581 ESTYTALIKGLASEGLLCEAQDLL 604
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 145/306 (47%), Gaps = 20/306 (6%)
Query: 68 TVRRLAKSKRFSDIETLIES----HKNDPKITQEP------YLCNLIRSYGQAGMFDHAM 117
++ L +KR+ D+E L++ H+ ++ Q +I + G + A
Sbjct: 227 VLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVAN 286
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+M G +V+ +N +L + ++K L E+ +K N D +++ +L+
Sbjct: 287 EILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK-NCPLDDVTFNILVDF 345
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
C +G D+ +ELL +M G +TYTTV+N K+G +EA L M G +
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405
Query: 238 VAAYNVRITNTYGGDPER---LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+Y + + ER +EL+ M G P+ +++N ++ CK ++++A ++
Sbjct: 406 TISYTIVLKGLC--STERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIEL 463
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGL 352
+ + NGC+P+ ++ T I L +G ++A ++ +VM++K P+ T + L
Sbjct: 464 LKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELL--NVMINKGITPNVITYSSMAFAL 521
Query: 353 VKKKKI 358
++ +I
Sbjct: 522 AREGRI 527
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + G+ D A+ M G + IS+ +L C+ R D ++ I +
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI--Q 434
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +++ ++ C G ++A+ELL +M G ++Y+TV++ L K G EE
Sbjct: 435 QGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEE 494
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L + M KG+ +V Y+ + G +++ ++ D ++DA ++ D + YN +++
Sbjct: 495 ALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVIS 554
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK D A + NGC PN +T+ I L G +A + E
Sbjct: 555 SLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSE 606
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ A ++ A +M + P ++FN L+ ++ L D+V L +++ ++
Sbjct: 307 VLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQM-LEH 365
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I+Y ++ C G D+A+ LL M + G + T++YT VL L +A
Sbjct: 366 GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDA 425
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L S M ++G + +N I G E+ EL+ +M G PD ISY+ ++
Sbjct: 426 EELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDG 485
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
K +EA ++ + G +PN T+ + + L G DK ++F
Sbjct: 486 LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMF 534
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 124/281 (44%), Gaps = 20/281 (7%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS----FNALLFACTRSRLYDKVPILFDEI 158
++R G A+ D+M T RS + ++ ++ + RS Y + + +
Sbjct: 122 VVRGLCGRGRIADALAVLDEM----TSRSCVPIPPMYHVIIESACRSGGYSSALRVLEAL 177
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CLYKQ 216
K + + D + L++ + CD G D+ LE+L ++ G E V+Y VL C K+
Sbjct: 178 HAKGS-TLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKR 236
Query: 217 -GNAEE-------AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAG 267
G+ EE S+M + G D+ Y I G E E++ M G
Sbjct: 237 WGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYG 296
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
LKP+ + YN ++ C + ++A+++ + + C + TF + C +G D+
Sbjct: 297 LKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVI 356
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
++ ++ + +PD T ++ G K+ I EA +++ +
Sbjct: 357 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 70/379 (18%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE 86
S ++ + + S+ DP A +I+ S+ + SR + + + +L + + F+ I+ ++
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQ-PNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG-TPRS---------VISFN 136
H++ LI+ Y +A + + + TF +M E TP+ ++S
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 137 ALL---FACTRS-RLYDKVP------------ILFDEIPKKYNL---------SPDKISY 171
L F +S RL+ +P L D++ Y L PD SY
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L++ C G + A+ELL++M NKG ++YTT+LN L ++ EA +L M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
KG + PD + YN ++ +C+ + +A
Sbjct: 289 KGCN----------------------------------PDLVHYNTMILGFCREDRAMDA 314
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+KV + + NGCSPN+ ++RT I LC G FD+ K +E + P F+ LV+G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 352 LVKKKKIKEAKGVIRTIKK 370
K++EA V+ + K
Sbjct: 375 FCSFGKVEEACDVVEVVMK 393
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%)
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
++ G ++ EL R G+ P+T SYN LM +C N+ + A +++ + E P+
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+++ I C G + A ++ + + +PD + L+ L +K +++EA ++
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 368 IKKK 371
+K K
Sbjct: 286 MKLK 289
>gi|357138274|ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 423
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 156/333 (46%), Gaps = 16/333 (4%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQ--EPYLCNLIRSYGQAGMFDHAMRTFDQMD 124
L V RLA + R + +++ S E +L LI Y AGM H++ TF
Sbjct: 85 LAVTRLASAGRRDLVFSILSSSLTALPAPHPSEGFLIRLISLYAAAGMPQHSLSTF---- 140
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
L P + F+ALL A + +D F ++P + + P +S+ +LLKS +G
Sbjct: 141 RLVKPATDRVFSALLAAYHDTAQHDLAVTAFRDLPAELSFQPGVVSHNVLLKSMVATGDV 200
Query: 185 DKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME--KKGVDLDVAAY 241
A ++ +EM +K GV+ V+ VL K + ++L+ E+ K+ + +V Y
Sbjct: 201 AGARQVFDEMADKAGVQPDIVSCNEVLRGYLKTADYAAFDQLFKEIAGGKRRLKPNVTTY 260
Query: 242 NVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N+R+ G +EL+D M G+ P+ S+N ++ CK + A +++ + E
Sbjct: 261 NLRMAALCAKGRSFEAEELLDVMGANGVPPNRESFNTVIGGLCKEGEVGAAAALFKRMPE 320
Query: 301 ------NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
G SPN T+ + L F A +V KE + P F VK L++GLVK
Sbjct: 321 VPRPNGKGVSPNFETYIMLLEALVEKRVFSPALEVCKECLANKWAPPFQAVKGLIQGLVK 380
Query: 355 KKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
+K+K+AK + ++K + W+ VE +
Sbjct: 381 SRKVKQAKELGMAMRKATKGDAKAEWENVESAI 413
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 131/252 (51%), Gaps = 4/252 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R++ G +D + +M G + ++++ L+ + C R+ + + +L I K+
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+PD SY L+ + C G D A+ +++ M + G V Y T+L L K GNA +
Sbjct: 343 --LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQ 400
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +++++ G +V++YN I+ + GD R ++ M G+ PD I+YN L++
Sbjct: 401 ALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLIS 460
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C C++ +++EA + + +E++G P ++ + LC D A +F E + P
Sbjct: 461 CLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRP 520
Query: 341 DFNTVKLLVEGL 352
+ T LL+EG+
Sbjct: 521 NETTYILLIEGI 532
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 11/302 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELG 127
+ R K+ +F++ +E N T + LC LI+ + + A R + ++
Sbjct: 75 LNRSCKAGKFNESLYFLECLVNK-GYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
P V ++NA++ C +R+ +L K PD ++Y +++ S C+
Sbjct: 134 EP-DVFAYNAVISGFCKVNRIEAATQVL--NRMKARGFLPDIVTYNIMIGSLCNRRKLGL 190
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL++L+++ T +TYT ++ +G EA +L EM +G+ D+ YN I
Sbjct: 191 ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 250
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G ER ELI + G KPD ISYN L+ + DE +K+ + GC P
Sbjct: 251 GMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKG 363
N T+ I LC G D+A V K VM+ K PD + L+ L K+ ++ A G
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLK--VMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368
Query: 364 VI 365
++
Sbjct: 369 IM 370
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + AM+ ++M G + ++NA++ + + ++ L + K
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK- 271
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ISY +LL++ + G D+ +L+ EM ++G E VTY+ +++ L + G +EA
Sbjct: 272 GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEA 331
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M +K + D +Y+ I+ G + ++D M G PD ++YN ++
Sbjct: 332 ISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAA 391
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CKN ++A +++ L GC PN +++ T I L G+ +A + + PD
Sbjct: 392 LCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPD 451
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T L+ L + ++EA G++ +++ F P V+
Sbjct: 452 EITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 488
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 125/283 (44%), Gaps = 6/283 (2%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
+E +L L+ +AG F+ ++ + + G VI L+ + +K +
Sbjct: 67 RETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM 126
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ + + + PD +Y ++ C + A ++LN M+ +G VTY ++ L
Sbjct: 127 EIL--ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 184
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTI 273
+ A ++ ++ V Y + I T GG E +K L++EM GL PD
Sbjct: 185 RRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK-LLEEMLARGLLPDMY 243
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+YN ++ CK M++ A ++ L GC P+ ++ + G +D+ K+ E
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
P+ T +L+ L + +I EA V++ I+K+ P+
Sbjct: 304 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 346
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLA--KSKRFSDIETLIESHKNDPKITQE 97
+ ++AL+I++ + P S Y ++ +S+ + +I + +IT
Sbjct: 397 NANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYN 456
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+LI + G+ + A+ D M++ G +VIS+N +L + R D +F E
Sbjct: 457 ----SLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAE 512
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
+ +K P++ +Y LL++ +G +A+EL N + ++ V
Sbjct: 513 MIEK-GCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDV 553
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 7/312 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
++ ++ +R A+++R D T E K L+ +AGM + A F +
Sbjct: 155 FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214
Query: 123 MDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M +G P A++ +++ + +F ++ +K PD I+Y ++ +
Sbjct: 215 MMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKA 273
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G + +AL++L+ M K T VTY ++N L K G E AE L+ M G + Y
Sbjct: 274 GHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 242 NVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
I R+KE L DEM +AG +PD I++ ++ CK+ ++A K +E +
Sbjct: 334 TSLIHGF--AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
GC PN T+ T I L G A+++ K + PD T L++G K ++
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 359 KEAKGVIRTIKK 370
EA ++ + K
Sbjct: 452 DEAAQLLDELDK 463
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 144/338 (42%), Gaps = 8/338 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
D+A + + K +SP Y+ V+ L + ++ L E K +
Sbjct: 452 DEAAQLLDELDKCSSSPNLQLYSS--LVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLC 509
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR--LYDKVPILFDEI 158
C++I + G D A R F +M G ++N L+ RSR ++ L ++
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
L PD ++Y L C G D+A+++L E ++G V YT + L QG
Sbjct: 570 EMVGYL-PDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
+ A L+ EM ++G D AAY I G E + DEM G KP +Y
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ C +DEA +EG+ G + + I+ C + D A K+F++ +
Sbjct: 689 LVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+P T L +GLV+ K ++A+ +++ + P
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 124/258 (48%), Gaps = 2/258 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R+ +A A F QM++ G P I++N ++ ++ + + D + K
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +++YG+L+ S C +G+ ++A EL M G +V YT++++ K G +EA
Sbjct: 291 CV-PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ EM + G DV + V I G+ E+ + +EM G KP+ ++Y ++
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + A ++ +G+ +GC P++ T+ + C G D+A ++ E P+
Sbjct: 410 LSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 342 FNTVKLLVEGLVKKKKIK 359
LV+GL ++
Sbjct: 470 LQLYSSLVKGLCDGGSVE 487
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 40/295 (13%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
++M + G + SFN L+ + R+R D F EI K+ PD ++ +L+ C
Sbjct: 143 EEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF-EIMKRKRCKPDLHTFLILVDCLCK 201
Query: 181 SGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G +KA E+ +EM G V +T ++ L K +EA ++ +MEK G D
Sbjct: 202 AGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261
Query: 240 AYNVRITN---------------------------TYG---------GDPERLKELIDEM 263
AYN I TYG G ER +EL M
Sbjct: 262 AYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVM 321
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+G +P+++ Y L+ + K+ M EA +++ + E G P+ T I LC SGNF
Sbjct: 322 AASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF 381
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
++A K F+E + P+ T +++GL K ++ A +++ + FP +V
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 7/265 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I+ + G +A R M G P SV L C RL D+ L DE+
Sbjct: 405 TIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL-DEAAQLLDEL-D 462
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE-VTTVTYTTVLNCLYKQGNA 219
K + SP+ Y L+K CD GS + L+ L E E + +++ L K G
Sbjct: 463 KCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRL 522
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN---TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+EA R++ M +G D YN+ I + ER L+ ++ G PD ++Y
Sbjct: 523 DEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYT 582
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L CK +D A K+ E G + + + LC G D+A +F+E V
Sbjct: 583 PLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
PD ++ GL+K KK+++A
Sbjct: 643 GGAPDAAAYCCIINGLIKGKKLEDA 667
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 159 PKKYNLSPDKISYGLLLKSHCDS-------GSSDKALELLNEMENKGVEVTTVTYTTVLN 211
P++ +L+PD + L+ S ++ GSS + N + +V VL
Sbjct: 35 PEREHLTPDFVRRADLVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLR 94
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
L G A R W+ E+ G DV YN + + + + +EM AG+ P
Sbjct: 95 SLKVTGTAISFFR-WAG-EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAP 152
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+T S+N L+ + + D+A +E ++ C P+ TF + LC +G +KA++VF
Sbjct: 153 NTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVF 212
Query: 331 KESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
E + + + PD +V L+K K++KEA+ V ++K FPP+ +
Sbjct: 213 HEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAI 261
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 117/271 (43%), Gaps = 14/271 (5%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
Y+C L+ + + G D A + D++D+ + ++ +++L+ C + + + LF++
Sbjct: 438 YIC-LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQ 496
Query: 158 I-PKKYNLSPD---KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN-- 211
NL P I GL C +G D+A + M ++G + TY ++N
Sbjct: 497 SKAAAENLDPGLCCSIIVGL-----CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGL 551
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKP 270
C ++ E A L ++E G D Y + I G+ +R ++++E G
Sbjct: 552 CRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNA 611
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y L T C +D A +++ + G +P+A + I L + A K F
Sbjct: 612 DVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFF 671
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
E + + P T LV+ L + EA
Sbjct: 672 DEMIGKGQKPTVATYTALVQALCHAGNVDEA 702
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + + +P ++ Y + L K K+ D + +
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYC--CIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
L+++ AG D A F+ M G SV+ ++AL+ ++ D LF+++
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ N+ P ++ L SG ++KA ELL EM G T+T +L+ L K +
Sbjct: 748 RGNV-PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESG 806
Query: 221 EAERLWSE 228
+ +L E
Sbjct: 807 KLLKLVQE 814
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 172/365 (47%), Gaps = 12/365 (3%)
Query: 23 ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASP-VSSRYAQDLTVRRLAKSKRFSDI 81
+ +I+ S+ +R+E D +K++ ++ S + YA+ + + + V RL + +F
Sbjct: 11 SKNITPSQVIKLMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAA 70
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG---TPRSVISFNAL 138
E ++ K + + E L ++ R YG+ ++R F +M + + ++ ++ A+
Sbjct: 71 EDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAI 130
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC-DSGSSDKALELLNEMENK 197
L + L K F + ++ L P S +L+K+ C + G+ D L++ +EM +
Sbjct: 131 LVEENQLNLAFK----FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKR 186
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERL 256
G + + TY T+++ L + G +EA++L++EM +K V Y I G + +
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
++EM+ G++P+ +Y+ LM CK+ +A +++E + GC PN T+ T I
Sbjct: 247 MRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
LC +A ++ + PD ++ G K +EA + I PN
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPN 366
Query: 376 VLRAW 380
L W
Sbjct: 367 RL-TW 370
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 43/256 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A + F +M E +V+++ +L+ S+ D+ +E+ K
Sbjct: 198 LISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGK- 256
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y L+ C G S +A+EL M +G VTYTT++ L K+ +EA
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTISYNF---- 277
L M +G+ D Y I+ R +DEM G+ P+ +++N
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 278 -------------------------------------LMTCYCKNEMMDEAKKVYEGLEE 300
L+ C CK +A ++ + +
Sbjct: 377 SNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVT 436
Query: 301 NGCSPNATTFRTWIYH 316
+GC PN T++ I H
Sbjct: 437 DGCIPNKGTWKLLIGH 452
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 159/337 (47%), Gaps = 7/337 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +IY V + + + Y ++ + L K+++ + ++ + +
Sbjct: 340 DLAWEIYQEVVR--SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYN 397
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI +Y + G+ + A D M G V ++NA++ ++ Y + + DE+ K
Sbjct: 398 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM-LK 456
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD +Y +LL C + + A + +EM ++GV V+++ ++ L K G ++
Sbjct: 457 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 516
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + + +M+ G+ D Y + I G E LK + DEM + G D ++YN ++
Sbjct: 517 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK-VRDEMLEQGCXLDVVTYNTIL 575
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +M+ EA +++ + E G P+ TF T I GN +KA +F+ + +
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLK 635
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
PD T L++G K ++++ + I ++ PN
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 672
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G + A+ F+ M + V+++N L+ + +KV L++++ +
Sbjct: 609 LINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR- 667
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ISYG+L+ +C+ G +A L +EM KG E T +T T++ + GNA +A
Sbjct: 668 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 727
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ S M KG+ D YN I + +R L+++M ++GL PD I+YN ++
Sbjct: 728 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 787
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + M EA+ + + E G +P+ +T+ + I N +A++V E + +PD
Sbjct: 788 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 38/370 (10%)
Query: 45 LDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLI 104
++I S+ Y + S+ DL VR ++++ + K+ +L+
Sbjct: 271 VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLL 330
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
+ G D A + ++ G +V + N ++ A +++ + ++ +K +
Sbjct: 331 GGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GV 389
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
PD ++Y L+ ++C G ++A EL++ M KG++ TY ++N L K G A+
Sbjct: 390 FPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKG 449
Query: 225 LWSEMEKKGVDLDVAAYNVRIT----NTYGGDPERL----------KELID--------- 261
+ EM K G+ D A YN+ + N D ER+ +L+
Sbjct: 450 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 509
Query: 262 -------------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+M++AGL PD + Y L+ +C+N +M EA KV + + E GC +
Sbjct: 510 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVV 569
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-T 367
T+ T + LC +A ++F E PDF T L+ G K + +A +
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629
Query: 368 IKKKFPPNVL 377
I++ P+V+
Sbjct: 630 IQRNLKPDVV 639
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R FD+M G ++SF+AL+ +++ D+ F ++ K L+PD + Y +L+
Sbjct: 482 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILI 540
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV- 234
C +G +AL++ +EM +G + VTY T+LN L K+ EA+ L++EM ++GV
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600
Query: 235 -DL---------------------------------DVAAYNVRITN-TYGGDPERLKEL 259
D DV YN I G + E++ EL
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
++M + P+ ISY L+ YC + EA ++++ + E G T T + C
Sbjct: 661 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 720
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+GN KA + ++ +PD T L+ G +K++ + A ++ ++ P+V+
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 779
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 5/267 (1%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
M A F +M E G +F L+ + +K LF+ + ++ NL PD ++Y
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTY 641
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C +K EL N+M ++ + ++Y ++N G EA RLW EM +
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701
Query: 232 KGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG + + N I Y G+ + E + M G+ PD I+YN L+ + K E MD
Sbjct: 702 KGFEATIITCNT-IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 760
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
A + +E +G P+ T+ + G +A + + + PD +T L+
Sbjct: 761 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Query: 350 EGLVKKKKIKEAKGVI-RTIKKKFPPN 375
G V + +KEA V +++ F P+
Sbjct: 821 NGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 113 FDHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
F H++++F M L R + A++ R +V I+ + N + + +
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
LL++++ + + E +++KG+ V+ ++L L K G + A ++ E+ +
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351
Query: 232 KGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
GV ++V N+ I E K + +M + G+ PD ++YN L+ YC+ +++E
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 411
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++ + + G P T+ I LC +G + +A V E + + PD T +L+
Sbjct: 412 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 471
Query: 351 GLVKKKKIKEAKGVI 365
+ + +A+ +
Sbjct: 472 ECCRNDNMMDAERIF 486
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 11/337 (3%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
++ S+ K P + + ++ + L + KR D E + + N + L
Sbjct: 195 GMEFLDSMRKRGVRP--NVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTL 252
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I Y + G D A + ++M E ++I+FN+LL + R + L E+
Sbjct: 253 IDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVN-G 311
Query: 164 LSPDKISYGLLLKS--HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +Y +L CD G+ A+EL + KG+ + T + +LN L KQG E+
Sbjct: 312 FMPDGYTYSILFDGLLRCDDGNG--AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEK 369
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE + + + G+ D YN + N Y GD + I+ M GL+P++I++N L+
Sbjct: 370 AEEILKKFTENGLVADEVIYNTFV-NGYCRIGDMNKAILTIERMESFGLRPNSITFNSLI 428
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C + MD+A++ + + E G +P+ T+ T I FD+ +++ ++ +
Sbjct: 429 DKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVK 488
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
P+ + L+ L K KI EA+ V+R I + PN
Sbjct: 489 PNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPN 525
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 128/271 (47%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI YG+ FD + +QM+E+G +V+S+ +L+ C ++ + +L D I +
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR- 520
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ Y +L+ C G AL +EM + T VTY +++ L K+G E
Sbjct: 521 -GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTE 579
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE +++ G DV YN I+ G+ + L + M++ G+KP +Y+ L++
Sbjct: 580 AEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLIS 639
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E ++ +K+Y + + P+ + I+ GN KAY + + + P
Sbjct: 640 -GCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHP 698
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T L+ G ++ K+ K ++ +K K
Sbjct: 699 DKMTYNSLILGHFREGKLSNIKDLVNNMKAK 729
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 10/260 (3%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY---NLSPDKIS 170
+ AM ++Q E G + + + LL + +K +EI KK+ L D++
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKA----EEILKKFTENGLVADEVI 388
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y + +C G +KA+ + ME+ G+ ++T+ ++++ ++AE +M
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 231 KKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+KGV V YN I + YG +R +++++M + G+KP+ +SY L+ C CK+ +
Sbjct: 449 EKGVTPSVETYNTLI-DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI 507
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
EA+ V + G PNA + I C G A + F E + P T +L
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVL 567
Query: 349 VEGLVKKKKIKEAKGVIRTI 368
++GL KK K+ EA+ + I
Sbjct: 568 IDGLCKKGKLTEAEDFLTQI 587
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 10/286 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI G A+R FD+M +++++N L+ C + +L + L
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ SPD I+Y L+ + ++G+ K L L M+N G++ T TY +++ K+G E
Sbjct: 592 H--SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IEL 648
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
E+L++EM + + D YN I + Y G+ ++ L M D G+ PD ++YN L+
Sbjct: 649 VEKLYNEMLQMNLLPDRVVYNAMI-HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLI 707
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + + K + ++ +P A T+ + C +F AY ++E V + +
Sbjct: 708 LGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFL 767
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEE 385
P+ + L GL ++ +++E + + + K ++ W EE
Sbjct: 768 PNASICNELTAGLEQEGRLQEVQVICSEMNVK---GIINHWPSKEE 810
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 9/174 (5%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
K ++L E+EN G T Y + K N + M K+GV +V YNV I
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 246 TNTYGG--DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
GG +R+++ + DEM + L ++YN L+ YCK +D A K+ E ++E
Sbjct: 219 ----GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE 274
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+PN TF + + LC +A + KE + +PD T +L +GL++
Sbjct: 275 KSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
IP + LS +LL C S +A+EL M G + V+ + + +CL +
Sbjct: 102 IPLRITLSD------MLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEK 155
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYN------VRITNTYGGDPERLKELIDEMRDAGLKPD 271
+ L+ E+E G D Y V++ N G E +D MR G++P+
Sbjct: 156 QFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMG-----MEFLDSMRKRGVRPN 210
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV-- 329
YN L+ C+ + + +A+K+++ + + T+ T I C G D A+K+
Sbjct: 211 VFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRE 270
Query: 330 -FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPN 375
KE + I FN+ L+ GL K +K+KEA+ +++ ++ F P+
Sbjct: 271 RMKEKSVAPNIITFNS---LLSGLCKMRKMKEARSLLKEMEVNGFMPD 315
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 157/312 (50%), Gaps = 17/312 (5%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+ A + + L+K +R + ++ +S K+ +P + +L+ + +AG A R
Sbjct: 181 KIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVV---VYTSLVHGWCRAGNISEAERV 237
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F +M G +V +++ ++ A RS + +F E+ P+ I++ L++ H
Sbjct: 238 FGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHV 296
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G ++K L++ N+M+ G +TY ++ + N EEA ++ + + KKG +L+ +
Sbjct: 297 KAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNAS 355
Query: 240 AYNVRITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++N +G GD + +M+D +P+T++YN LM + + D K+
Sbjct: 356 SFN----PIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKL 411
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLV 353
+ ++EN PNA T+R I CG G+++ AY FKE + + P +++++ L
Sbjct: 412 RKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLR 471
Query: 354 KKKKIKEAKGVI 365
K ++K+ + ++
Sbjct: 472 KAGQLKKHEELV 483
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 145/280 (51%), Gaps = 9/280 (3%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
F + T +E + P EPY+ +I G+AG+ A+ F++M++ G I+F+
Sbjct: 132 FFNWATNLEEFGHSP----EPYM-EMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSV 186
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
++ + ++ R + FD + ++ PD + Y L+ C +G+ +A + EM+
Sbjct: 187 VISSLSKKRRAIEAQSFFDSLKDRF--EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMA 244
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERL 256
G++ TY+ V++ L + G A ++SEM G D + + N+ + G E++
Sbjct: 245 GIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKV 304
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
++ ++M+ G PD I+YNFL+ +C+++ ++EA K+ +++ GC+ NA++F
Sbjct: 305 LQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGC 363
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ G+ + A+++F + + P+ T +L+ KK
Sbjct: 364 ISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKK 403
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 95/191 (49%), Gaps = 2/191 (1%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G + +A+ N ME+ G + + ++ V++ L K+ A EA+ + ++ + + DV
Sbjct: 159 AGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVV 217
Query: 241 YNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
Y + G+ + + EM+ AG++P+ +Y+ ++ C++ + A V+ +
Sbjct: 218 YTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMI 277
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ GC PNA TF + +G +K +V+ + + PD T L+E + ++
Sbjct: 278 DVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLE 337
Query: 360 EAKGVIRTIKK 370
EA ++ ++KK
Sbjct: 338 EAVKILNSVKK 348
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 17/133 (12%)
Query: 249 YGGDPERLKELIDEMRDAGL----------------KPDTISYNFLMTCYCKNEMMDEAK 292
+G PE E+ID AGL KPD I+++ +++ K EA+
Sbjct: 142 FGHSPEPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQ 201
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ L++ P+ + + ++ C +GN +A +VF E M P+ T ++++ L
Sbjct: 202 SFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDAL 260
Query: 353 VKKKKIKEAKGVI 365
+ +I A V
Sbjct: 261 CRSGQITRAHDVF 273
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 157/312 (50%), Gaps = 17/312 (5%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+ A + + L+K +R + ++ +S K+ +P + +L+ + +AG A R
Sbjct: 216 KIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVV---VYTSLVHGWCRAGNISEAERV 272
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F +M G +V +++ ++ A RS + +F E+ P+ I++ L++ H
Sbjct: 273 FGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHV 331
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G ++K L++ N+M+ G +TY ++ + N EEA ++ + + KKG +L+ +
Sbjct: 332 KAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNAS 390
Query: 240 AYNVRITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++N +G GD + +M+D +P+T++YN LM + + D K+
Sbjct: 391 SFN----PIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKL 446
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLV 353
+ ++EN PNA T+R I CG G+++ AY FKE + + P +++++ L
Sbjct: 447 RKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLR 506
Query: 354 KKKKIKEAKGVI 365
K ++K+ + ++
Sbjct: 507 KAGQLKKHEELV 518
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 137/256 (53%), Gaps = 6/256 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Y +AG+ A+ F++M++ G I+F+ ++ + ++ R + FD + ++
Sbjct: 187 LVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF 246
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + Y L+ C +G+ +A + EM+ G++ TY+ V++ L + G A
Sbjct: 247 --EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRA 304
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++SEM G D + +N +R+ + G E++ ++ ++M+ G PD I+YNFL+
Sbjct: 305 HDVFSEMIDVGCDPNAITFNNLMRV-HVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIE 363
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C+++ ++EA K+ +++ GC+ NA++F + G+ + A+++F + + P
Sbjct: 364 SHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRP 422
Query: 341 DFNTVKLLVEGLVKKK 356
+ T +L+ KK
Sbjct: 423 NTVTYNILMRMFADKK 438
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 102/202 (50%), Gaps = 2/202 (0%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
++ +L++ + +G + +A+ N ME+ G + + ++ V++ L K+ A EA+ + +
Sbjct: 183 TFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSL 242
Query: 230 EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ + + DV Y + G+ + + EM+ AG++P+ +Y+ ++ C++ +
Sbjct: 243 KDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQI 301
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
A V+ + + GC PNA TF + +G +K +V+ + + PD T L
Sbjct: 302 TRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFL 361
Query: 349 VEGLVKKKKIKEAKGVIRTIKK 370
+E + ++EA ++ ++KK
Sbjct: 362 IESHCRDDNLEEAVKILNSVKK 383
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D A +L++ M+ + VE+ T+T ++ K G A EA ++ ME G D A++V
Sbjct: 163 DLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVV 222
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I++ + + D ++D +PD + Y L+ +C+ + EA++V+ ++ G
Sbjct: 223 ISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGI 281
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN T+ I LC SG +A+ VF E + V P+ T L+ VK + ++
Sbjct: 282 QPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ 341
Query: 364 VIRTIKK-KFPPNVL 377
V +K+ PP+ +
Sbjct: 342 VYNQMKRLGCPPDAI 356
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 149/331 (45%), Gaps = 41/331 (12%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-C 142
L+ +DP + + N + G+ D A +QM + G +FN L+ A C
Sbjct: 325 LMLQEGHDPDVFTYNTVINCLSKNGE---LDEAKGIVNQMVDRGCLPDTTTFNTLIVALC 381
Query: 143 TRSRLYDKVPI----------------------------------LFDEIPKKYNLSPDK 168
+++RL + + + LF+E+ K +PD+
Sbjct: 382 SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCAPDE 440
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y +L+ C G AL+LL EME+ G +TVTY T+++ L KQ EEAE ++ +
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M+ G+ +N I + ELI++M GL+P I+YN ++T YCK
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ +A + E + NG + T+ T I LC +G A K+ + + P
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620
Query: 348 LVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+++ L ++ +++A + R + + PP+ L
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDAL 651
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 152/360 (42%), Gaps = 41/360 (11%)
Query: 33 SKLRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND 91
+ LR + DP+ AL + S++++ +P SR + +++L + F +E L+ + +
Sbjct: 61 TALREQADPEAALQMLNSALAREDFAP--SRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAM---------------------------------- 117
+ + + SY + FD A+
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178
Query: 118 --RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+++M + G V++ N L+ A R+ ++ +E+ + ++PD+ ++ L+
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM-SSHAVAPDETTFTTLM 237
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ + GS + AL + +M G T VT ++N K G E+A + G +
Sbjct: 238 QGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE 297
Query: 236 LDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D YN + G +++D M G PD +YN ++ C KN +DEAK +
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + GC P+ TTF T I LC ++A + +E + PD T +L+ L K
Sbjct: 358 VNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCK 417
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 125/253 (49%), Gaps = 3/253 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G +A+ +M+ G PRS +++N ++ A + ++ +FD++ +
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM-DAH 504
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+S +++ L+ C + D A EL+ +M +G++ + +TY ++L KQG+ ++A
Sbjct: 505 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKA 564
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M G ++DV Y I G + +L+ MR G++P +YN ++
Sbjct: 565 ADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQS 624
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKIP 340
+ + +A ++ + E G P+A T++ LC G G +A+ E V +P
Sbjct: 625 LFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMP 684
Query: 341 DFNTVKLLVEGLV 353
+F++ ++L EGL+
Sbjct: 685 EFSSFRMLAEGLL 697
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +P + Y +++ +G+ D L+ EM +G E + + + ++A
Sbjct: 84 DFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDA 143
Query: 223 ERLW-SEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLMT 280
L +++ GV D A YN + G +L E + +EM D G++PD ++ N L+
Sbjct: 144 VDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIK 203
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ + A + E + + +P+ TTF T + G+ + A +V + + P
Sbjct: 204 ALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSP 263
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
TV +L+ G K ++++A G I + I F P+
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPD 299
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 37/296 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI+S+G GM + + + +M E G S+ S+N L+ S+ + +F E+ +
Sbjct: 184 SLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVF-EVMEN 242
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y ++K +C+ G + KA E L ME + V +TY T++ Y +G+ +
Sbjct: 243 GKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDS 302
Query: 222 AERLWSEMEKKGVDL-----------------------------------DVAAYNVRI- 245
L+ EM++KG+++ +VA Y I
Sbjct: 303 CLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALID 362
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+N G+ L M+ GL+PD ++Y ++ CK+ +DEA + E G +
Sbjct: 363 SNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAV 422
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
NA + + I L SG D+A ++F E V PD L++ L K KI EA
Sbjct: 423 NAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEA 478
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 3/244 (1%)
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
F+ M G +V + AL+ + + + +LF + KK L PD+++YG+++ S
Sbjct: 341 VFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRM-KKEGLEPDEVTYGVIVNSL 399
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C SG D+ALE + KGV V + Y+++++ L K G +EAER++ EM KKG D
Sbjct: 400 CKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDS 459
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN I G + L M G +Y L+T + +EA +++
Sbjct: 460 YCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDL 519
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ + G +P A FR LC SG +A K+ E + IP+ ++ L K +
Sbjct: 520 MIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPE-TAFDDMINILCKAGR 578
Query: 358 IKEA 361
IKEA
Sbjct: 579 IKEA 582
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 116/295 (39%), Gaps = 40/295 (13%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+ ++ + K P Y + V L KS R + +E + +
Sbjct: 372 EAMLLFKRMKKEGLEPDEVTYG--VIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSS 429
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G++G D A R F +M + G P
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCP--------------------------------- 456
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD Y L+ + G D+AL L ME G + T TYT ++ L+++ EEA
Sbjct: 457 ---PDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEA 513
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
LW M KG+ AA+ T G R +++DEM G+ P+T +++ ++
Sbjct: 514 LTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINI 572
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
CK + EA K+ +G+ + G I L +GN D A K+ + + +
Sbjct: 573 LCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGI 627
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+KS + G ++ L + M+ G+E + +Y ++N L E AER++ ME
Sbjct: 185 LIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGK 244
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY-NFLMTCYCKNEMMDEA 291
+ DV YN I G + E + M + PD I+Y + CY + + D
Sbjct: 245 IGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGD-FDSC 303
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+Y ++E G + I LC G + Y VF+ + + L++
Sbjct: 304 LGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDS 363
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
K + EA + + +KK+
Sbjct: 364 NAKCGNMGEAMLLFKRMKKE 383
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 7/205 (3%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ +G D + ++ + G+ +T + +++ G EE +W M+
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206
Query: 231 KKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+ G++ + +YN + E + + + M + + PD ++YN ++ YC+
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK---IPDFNTVK 346
+A + + +E +P+ T+ T I G+FD ++ E M K IP +
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHE--MDEKGLEIPP-HVYS 323
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKK 371
L++ GL K K E V + K
Sbjct: 324 LVIGGLCKDGKRVEGYTVFENMISK 348
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 130/275 (47%), Gaps = 35/275 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
I YG++G D A+ TF++M G ++++ NA L++ + ++F+ + K
Sbjct: 445 FIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRL-KSN 503
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++Y +++K + +G D+A+ELL++M E + +++N LYK G +EA
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+++ + +D L P ++YN L+
Sbjct: 564 WKMFCRL----------------------------------KDMKLAPTVVTYNTLIAGL 589
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
K + A +++ + NGC PN TF T + LC + D A K+ + ++ +PD
Sbjct: 590 GKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDV 649
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
T ++ GLV +K++ +A + +KK P+ +
Sbjct: 650 LTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCV 684
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 12/295 (4%)
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
SHK D ++T Y+ ++ + G + +M+ G VI+F L+ A ++
Sbjct: 329 SHKPD-RVT---YI-TMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAG 383
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
D+ L D + +K + P+ +Y L+ D AL+L N ME GV T TY
Sbjct: 384 NIDEAFHLLD-VMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTY 442
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEM 263
++ K G +++A + +M+ +G+ ++ A N + + + RL+E + + +
Sbjct: 443 ILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL--AEMGRLREAKVIFNRL 500
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+ GL PD+++YN +M CY K +DEA ++ + EN C P+ + I L +G
Sbjct: 501 KSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRV 560
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
D+A+K+F + P T L+ GL K+ +++ A + ++ PPN +
Sbjct: 561 DEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTI 615
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 10/274 (3%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
F E +I S IT + NL++S D A+ F + + ++
Sbjct: 845 FELYEQMICSSCKPNTITHNIIIANLVKS----NSLDKALDLFYDLVSGDFSPTPCTYGP 900
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
LL +S ++ LF+E+ Y P+ Y +L+ +G + A EL M +
Sbjct: 901 LLDGLLKSGRLEEAKELFEEMVD-YGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE 959
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK 257
G+ +YT+++ CL + G ++A + ++++ G+ LD AYN+ I G R++
Sbjct: 960 GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL--GRSHRIE 1017
Query: 258 E---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
E L DEM+ G+ PD +YN L+ M+++A K+YE L+ G PN T+ I
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALI 1077
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
SGN D AY V+K ++ P+ T L
Sbjct: 1078 RGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 150/341 (43%), Gaps = 7/341 (2%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKH-YASPVSSRYAQDLTVRRLAKSKRFSDIE 82
+++S + + L S DP A ++SV++ + + L + R+ +R D+
Sbjct: 87 NALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRI--HRRVGDMV 144
Query: 83 TLIESHKNDP-KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
+ +N K YL + + G+ F +M E G + S+N L+
Sbjct: 145 VVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPF-AFGKMREAGFHLNAYSYNGLIHL 203
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+S L + ++ + + L P ++ L+ + ++ LL EME+ G++
Sbjct: 204 LLQSGLCREALEMYRRMVLE-GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKP 262
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
TYT + L + G +EA R+ ME G DV Y V I G + EL
Sbjct: 263 NIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELF 322
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+M+ + KPD ++Y ++ + + K+ + +E +G +P+ TF + LC +
Sbjct: 323 VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKA 382
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GN D+A+ + +P+ +T L+ GL++ ++ +A
Sbjct: 383 GNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 5/267 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A F +M G V ++N LL A +S +++ L++++ + P+ I++ +
Sbjct: 807 EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICS-SCKPNTITHNI 865
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ + S S DKAL+L ++ + T TY +L+ L K G EEA+ L+ EM G
Sbjct: 866 IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ A YN+ I N +G GD EL M G++PD SY L+ C C+ +D+A
Sbjct: 926 CRPNNAIYNILI-NGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDA 984
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+E L++ G ++ + I L S ++A ++ E PD T L+
Sbjct: 985 LHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILN 1044
Query: 352 LVKKKKIKEAKGVIRTIK-KKFPPNVL 377
L +++A + ++ PNV
Sbjct: 1045 LGVAGMVEQAGKLYEELQFIGLEPNVF 1071
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 146/329 (44%), Gaps = 19/329 (5%)
Query: 40 DPDKALDIYSSVSKH----YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKIT 95
D + I + KH A V R+ ++L V+ +S F IE + H ++
Sbjct: 753 DGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFL-IEGFLGVHNDEMAWN 811
Query: 96 QEPYLCN------------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
+ N L+ ++G++G + ++QM + I+ N ++
Sbjct: 812 LFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLV 871
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+S DK LF ++ + SP +YG LL SG ++A EL EM + G
Sbjct: 872 KSNSLDKALDLFYDLVSG-DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNN 930
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE 262
Y ++N K G+ A L+ M ++G+ D+ +Y + G + ++
Sbjct: 931 AIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEK 990
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
++ GL D+I+YN ++ ++ ++EA +Y+ ++ G +P+ T+ + I +L +G
Sbjct: 991 LKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGM 1050
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++A K+++E + P+ T L+ G
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRG 1079
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 2/238 (0%)
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
ELG ++ S+N L+ + LF E+ K +PD +Y LLL +H SG
Sbjct: 783 ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEM-KNAGCAPDVFTYNLLLDAHGKSGKI 841
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
++ EL +M + T+T+ ++ L K + ++A L+ ++ Y
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901
Query: 245 ITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ G E KEL +EM D G +P+ YN L+ + K ++ A ++++ + G
Sbjct: 902 LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P+ ++ + + LC +G D A F++ D L+++GL + +I+EA
Sbjct: 962 RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEA 1019
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 121/287 (42%), Gaps = 40/287 (13%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A++ +M + V++FN ++ + LF ++ K L+PD ++
Sbjct: 631 DLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM--LTPDCVTLCT 688
Query: 174 LLKSHCDSGSSDKALELLNEMENK-GVEV-------------------TTVTYTTVLNC- 212
LL +G + A ++ + ++ GV V T+ + L C
Sbjct: 689 LLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCG 748
Query: 213 ---------------LYKQGNAEEAERLWSEMEKK-GVDLDVAAYNVRITNTYG-GDPER 255
L K A A+ ++ K+ GV + +YN I G + E
Sbjct: 749 RVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEM 808
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L EM++AG PD +YN L+ + K+ ++E ++YE + + C PN T I
Sbjct: 809 AWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIA 868
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+L S + DKA +F + V P T L++GL+K +++EAK
Sbjct: 869 NLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAK 915
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 1/218 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F K+ + P SY L++ + + A L EM+N G TY +L+
Sbjct: 776 VFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAH 835
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDT 272
K G E L+ +M + +N+ I N + ++ +L ++ P
Sbjct: 836 GKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTP 895
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+Y L+ K+ ++EAK+++E + + GC PN + I +G+ + A ++FK
Sbjct: 896 CTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKR 955
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
V PD + LV L + ++ +A +K+
Sbjct: 956 MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQ 993
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 7/231 (3%)
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ P F ++ ++ + SY L+ SG +ALE+ M +G++ + T++ +
Sbjct: 177 QTPFAFGKM-REAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSAL 235
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDA 266
+ K+ + E + L EME G+ ++ Y + I G R+ E ++ M D
Sbjct: 236 MVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVL--GRAGRIDEACRIMKRMEDD 293
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G PD ++Y L+ C +D+A +++ ++ + P+ T+ T + G+ +
Sbjct: 294 GCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRV 353
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
+ + E PD T +LV L K I EA ++ ++K+ PN+
Sbjct: 354 KEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNL 404
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G++ + A+ +D+M G + ++N+L+ + + ++ L++E+ +
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL-QFI 1064
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
L P+ +Y L++ + SG+SD A + M G T T+ + N
Sbjct: 1065 GLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
L+ ++GM A+ + M E G VI+FN++L C R+ D + + +
Sbjct: 478 TLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 537
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P+ ++Y L+ D+AL+LL +M G TVTY+TV++ L K G E
Sbjct: 538 --GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 595
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
+A + +M G D YN I + +RL+E L+ EM +AG P ++Y
Sbjct: 596 DAVVVLRQMRDAGCLPDAVTYNTLIDGFF--KRQRLREAVGLLREMLEAGFHPSVVTYTT 653
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L C++ DEA ++ + + GC+PNA T+ + + LC +G +A F++
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 713
Query: 338 KI-PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ P L++GL K +I EA + R I+ P+V+
Sbjct: 714 VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV 755
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 7/268 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +Y G F A ++M G ++ ++ ++ A + D+ F IP+
Sbjct: 795 MINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D+ISY L+ S S S++ALELL M G Y TV++ L+K G+ E A
Sbjct: 855 R---DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVA 911
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTC 281
+L EM +G D+ Y + I+ L + +EM LKPD I Y+ L+
Sbjct: 912 AKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDA 971
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK + +D+A K+ L +G P T + T + LC + DKA +V +E + P
Sbjct: 972 FCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPG 1028
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ L V + ++ EA ++ ++
Sbjct: 1029 IHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 29/315 (9%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+E I+ K P + +L+ QA D A FD M E G VI++N LL
Sbjct: 294 LEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK 353
Query: 141 ACTRSRLYDKVPILFDEIP---KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-EN 196
+ R ++P + + + SP+ +++ L++ C++G ++A E+ M
Sbjct: 354 GLCKLR---RIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAV 410
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG-------------VDL------- 236
+G+ TY +L L K G++ E+ + +M ++ VD
Sbjct: 411 EGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCR 470
Query: 237 -DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ YN +T + G L++ M ++GL PD I++N ++ CK + + +A V
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ E GC PN T+ T I L D+A ++ + V + + T +V+GL+K
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590
Query: 355 KKKIKEAKGVIRTIK 369
++++A V+R ++
Sbjct: 591 VGRMEDAVVVLRQMR 605
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 92 PKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
P + LC+ L RS G FD A+ D M G + I++++++ ++ +
Sbjct: 646 PSVVTYTTLCHGLCRS----GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 701
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
F+++ + ++P I+Y L+ C +G D+A E L M G VT++ ++
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILI 761
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGL 268
N L G + L+ M ++G D+ AYN I N Y G+ L++EM+ G+
Sbjct: 762 NGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMI-NAYCLKGEFSAAYALLEEMKTHGI 820
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE---------------------------- 300
+T+++ ++ C N+ +DEA + + E
Sbjct: 821 AKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELL 880
Query: 301 -----NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+G SP+A + T + L +G+ + A K+ +E PD T +++ GL K
Sbjct: 881 RAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKA 940
Query: 356 KKIKEA 361
K++ A
Sbjct: 941 KQLPLA 946
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 4/232 (1%)
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++++N L+ C R+ D I ++ P ++Y ++ C DK +L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAI--QFGFRPTVVTYSTVIDGLCRDNEVDKGCKL 58
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L EM +G VTY T++N L QG A+EA L M G ++ + + I
Sbjct: 59 LEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCK 118
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ E ++DEM D G PD + L+ C+ +DEA ++ + G +P+A T
Sbjct: 119 EGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVT 178
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ T + L +G + A V + P T + V+GL K + A
Sbjct: 179 YNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGA 230
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 2/265 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A F + + G +V++++ ++ R DK L +E+ +
Sbjct: 7 LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGR- 65
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ ++Y L+ + G + +A LL M G +T+ ++ L K+G E A
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAA 125
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R+ EM +G DV + V + G + ++ G PD ++YN ++
Sbjct: 126 FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K ++ A V + L E+ SP TF + L +GN AY+ F P+
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR 366
T L++GL K K+ A G++R
Sbjct: 246 TVTYDALIDGLCKAGKLDIALGLLR 270
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y +L+ C +G A + G T VTY+TV++ L + ++ +L E
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 229 MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M +G + YN + G G + L++ M G P+ I++ ++ CK
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++ A +V + + + G P+ ++ LC G D+A+ F++ +++ PD T
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
+V+GL K +++ A V++ + + F P V
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVF 212
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 132/346 (38%), Gaps = 75/346 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I+ + G + A R D+M + G V LL A D+ F ++
Sbjct: 112 IIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV-LLI 170
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y ++ +G + A +L + T T+T ++ L K GN A
Sbjct: 171 GFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGA 230
Query: 223 ERLWSEMEKKGVD------------------LDVAAYNVRITNTYGG------------D 252
+ M + GV LD+A +R N+ G
Sbjct: 231 YEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQ 290
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP------- 305
RL+E I ++ P+ + +N LM C+ +DEA ++++ ++E+GCS
Sbjct: 291 AHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNI 350
Query: 306 -----------------------------NATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
N TF T I LC +G ++A++V++ V V
Sbjct: 351 LLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAV 410
Query: 337 HKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
I P+ T L+EGL K G R +++ F + R W+
Sbjct: 411 EGISPNRFTYAFLLEGLCK-------AGDSRRLEQCFEQMLEREWR 449
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P ++Y L+ SG AL LL M G+ +T+ +VL+ L K+ +A +
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ ++G +V Y+ I + + +L+ +M + G + +T++Y+ ++ K
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWI-----------------------YH----- 316
M++A V + + GC P+A T+ T I +H
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650
Query: 317 -------LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
LC SG FD+A ++ P+ T +V+GL K ++ EA G
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 704
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 142/293 (48%), Gaps = 10/293 (3%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
I+ ++E+ ++T P L N++ GQ + AM +M+E + ++ ++
Sbjct: 216 IDRMVETGFQPNEVTYGPVL-NVMCKSGQTAL---AMELLRKMEERNIKLDAVKYSIIID 271
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+ D LF+E+ K D I+Y L+ C++G D +LL +M + +
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-- 258
VT++ +++ K+G EA++L EM ++G+ + YN I RL+E
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC--KENRLEEAI 388
Query: 259 -LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
++D M G PD +++N L+ YCK +D+ +++ + G N T+ T +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
C SG + A K+F+E V PD + K+L++GL ++++A + I+K
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + G D+A F++M+ G +I++N L+ C R D +L D I +K
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SP+ +++ +L+ S G +A +LL EM +G+ T+TY ++++ K+ EE
Sbjct: 329 --ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI---------------------------TNTYG---- 250
A ++ M KG D D+ +N+ I T TY
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 251 -----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E K+L EM ++PD +SY L+ C N +++A +++ +E++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ + I+ +C + D A+ +F + D +++ L +K + +A +
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 366 R 366
R
Sbjct: 567 R 567
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
L+ S DP I L N Y +A D + F +M G + +++N L+
Sbjct: 393 LMISKGCDPDIMTFNILIN---GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+S + LF E+ + + PD +SY +LL CD+G +KALE+ ++E +E+
Sbjct: 450 QSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDE 262
Y +++ + ++A L+ + KGV LD AYN+ I+ D + L +
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M + G PD ++YN L+ + ++ A ++ E ++ +G + +T + I ++ SG
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI-NMLSSGE 627
Query: 323 FDKAY 327
DK++
Sbjct: 628 LDKSF 632
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI S+ + G A + +M + G + I++N+L+ C +RL + + ++ I K
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +++ +L+ +C + D LEL EM +GV TVTY T++ + G E
Sbjct: 399 CD--PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++L+ EM + V D+ +Y + + G+ E+ E+ ++ + ++ D Y ++
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C +D+A ++ L G +A + I LC + KA +F++ P
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
D T +L+ + A +I +K FP +V
Sbjct: 577 DELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADV 613
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 118/260 (45%), Gaps = 7/260 (2%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK--KYNLSPDKISYGLLLKSHC 179
QM+ G S+ + + ++ R R K+ F + K K PD + + LL C
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCR---KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+ALEL++ M G + T +T T++N L G +A L M + G +
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 240 AYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
Y V G EL+ +M + +K D + Y+ ++ CK+ +D A ++ +
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E G + T+ T I C +G +D K+ ++ + P+ T +L++ VK+ K+
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 359 KEAKGVIR-TIKKKFPPNVL 377
+EA +++ +++ PN +
Sbjct: 350 READQLLKEMMQRGIAPNTI 369
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 92/249 (36%), Gaps = 37/249 (14%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGV-------------------------- 199
P I + L + + + L L +ME+KG+
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 200 ---------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
E TV + T+LN L + EA L M + G + N +
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G LID M + G +P+ ++Y ++ CK+ A ++ +EE +A
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TI 368
+ I LC G+ D A+ +F E + D T L+ G + + ++R I
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 369 KKKFPPNVL 377
K+K PNV+
Sbjct: 326 KRKISPNVV 334
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 158/380 (41%), Gaps = 39/380 (10%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP++AL ++ + Y+ + +LAKS+ F ++ ++ + +E
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSS--LIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI+ YG+AG D A+ F ++ R++ S N L+ + +K FD
Sbjct: 119 FMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG-A 177
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK---- 215
K L P+ +S+ +L+K D + A ++ +EM V+ + VTY +++ L +
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDM 237
Query: 216 -------------------------------QGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
G EA++L +ME +G + Y V
Sbjct: 238 GKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVL 297
Query: 245 ITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+++ G + K L+ EM+ +KPD + YN L+ C + EA + ++ GC
Sbjct: 298 MSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGC 357
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PNA T+R + C G+FD V + P T +V GL+K + A
Sbjct: 358 KPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACF 417
Query: 364 VIRTIKKKFPPNVLRAWKKV 383
V+ + KK AW+ +
Sbjct: 418 VLEVMGKKKLSFGYSAWQNL 437
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 13/275 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY-----------DK 150
++I + + + A FD M G +I+ N L+ C R++ + +
Sbjct: 190 SMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNV 249
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
LF E+ +SPD ++ LL C++G +KALE+ + +++ T T ++
Sbjct: 250 AQDLFQEMISN-GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIII 308
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLK 269
N + K +EA L++ + GV+ DV YN+ I G+ R +++ EM G+
Sbjct: 309 NGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGII 368
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P T++YN ++ +CK ++EA+++ + + GCSP+ TF T I C +G D ++
Sbjct: 369 PSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLEL 428
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
F E + D T L+ G K + A+ +
Sbjct: 429 FSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDI 463
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + Q G + A F +M G +++ N LL + +K +F ++ +K
Sbjct: 236 HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF-KVFQK 294
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D + +++ C D+A +L N + GVE VTY ++ K+GN
Sbjct: 295 SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLR 354
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
AE ++ EM KG+ YN + + E ++++D M G PD ++++ L+
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK +D+ +++ + + G + T+ I+ C G+ + A +F+E V P
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCP 474
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D T + ++ GL K ++++ ++ ++K
Sbjct: 475 DTITFRSMLAGLCTKAELQKGLTMLEDLQK 504
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 48/295 (16%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M E G P +V++F L+ R + L D + ++ + PD ++YG ++ C G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGH-QPDAVTYGTIVNGMCKLG 59
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ AL +L +M+ ++ V Y+ +++ L K GN +A+ +++EM +KG+ +V YN
Sbjct: 60 DTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119
Query: 243 VRITN--TYG--GDPERL--------------------------------KELIDEMRDA 266
I +YG D E+L +EL EM
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT-----------WIY 315
+ P TI+Y+ ++ +CK+ +++AK +++ + GCSP+ T T I+
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
C GN + A +F+E + PD T L+ GL + K+++A + + +K
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 93 KITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
K+ + CN+I + D A F+ + G V+++N L+ + + +
Sbjct: 296 KMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRA 355
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
++ E+ K + P ++Y ++ C ++A ++++ M ++G VT++T++
Sbjct: 356 EDIYLEMLCK-GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKP 270
K G ++ L+SEM ++G+ D YN I GD +++ +EM +G+ P
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCP 474
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
DTI++ ++ C + + + E L+++
Sbjct: 475 DTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 3/186 (1%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
M G VT+TT++N L ++G +A L M ++G D Y + GD
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
++ +M ++ +K + + Y+ ++ CK+ +A+ ++ + E G PN T+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
I C G + A ++ ++ + + PD T L+ VK+ K+ A+ + R + ++
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 372 -FPPNV 376
FP +
Sbjct: 181 IFPTTI 186
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A F+++ + G + +SFN L+ +SR D+ + ++
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDE-GFRLKKTMEEN 287
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y +L+ C G D A +L +EM+ +G+ +T+T +++ + + A
Sbjct: 288 RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSA 347
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M GV D+ YN + GD + ++L+DEMR G+KPD I+Y L+
Sbjct: 348 MNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDG 407
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK ++ A ++ +G+ E G + F I C G A + +E V PD
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++++G KK +K +++ ++
Sbjct: 468 DATYTMVIDGYCKKGNVKMGFKLLKEMQ 495
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 8/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A + FD+M + G + I+F AL+ RSR D + ++
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM-LTM 357
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD + Y LL C G +KA +L++EM G++ +TYTT+++ K+G+ E A
Sbjct: 358 GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESA 417
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M ++GV LD A+ I+ G + + EM +AG+KPD +Y ++
Sbjct: 418 MEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDG 477
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + K+ + ++ NG P T+ + LC G A + + + + PD
Sbjct: 478 YCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPD 537
Query: 342 FNTVKLLVEGLVKKK------KIKEAKGVI 365
T +L+EG K K++ KG+I
Sbjct: 538 DITYNILLEGHCKNGKAEDLLKLRNEKGLI 567
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+Y P Y +L+ C GS A + NE+ +G+ TTV++ T++N L K N +
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
E RL ME+ + DV Y+V I G + ++L DEM+ GL+P+ I++ L+
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C++ +D A Y + G P+ + T + LC G+ +KA K+ E MV
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
PD T L++G K+ ++ A
Sbjct: 396 PDKITYTTLIDGYCKEGDLESA 417
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ L+ ++ DSG A++ + N ++ +L+ + + +SE+
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+ G V YN+ I G K + +E+R GL+P T+S+N L+ CK+ +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
E ++ + +EEN P+ T+ I+ LC G D A ++F E P+ T L+
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 350 EGLVKKKKIKEA 361
+G + ++I A
Sbjct: 336 DGQCRSRRIDSA 347
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
P + E+ + G P YN L+ +CK + +AK ++ + + G P +F T
Sbjct: 204 PVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNT 263
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I LC S N D+ +++ K+++ ++I PD T +L+ GL K+ ++ A+ + ++++
Sbjct: 264 LINGLCKSRNLDEGFRL-KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 3/253 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G V +FN+L+ + + LF+E+ +K PD+ +Y +L++S C +
Sbjct: 402 GVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEK-GCDPDEFTYSILIESLCSERRLKE 460
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL LL EME G V Y T+++ L K +AE ++ +ME GV YN I
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLIN 520
Query: 247 NTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E +L+D+M GLKPD +Y ++ +C+ + A + + + NGC P
Sbjct: 521 GLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEP 580
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I LC +G D A K+ + M + +++ L K+K+ KEA +
Sbjct: 581 DIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLF 640
Query: 366 RTIKKKF-PPNVL 377
R + +K PP+V+
Sbjct: 641 REMMEKGDPPDVI 653
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 35/277 (12%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
P V +FN L+ A ++ ++ +++P Y L PD+ ++ L++ + +
Sbjct: 194 AVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN-YGLRPDEKTFTTLMQGFIEEADVEG 252
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE------------------ 228
AL + M G E+T+V+ ++N L K+G EEA R E
Sbjct: 253 ALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGL 312
Query: 229 ---------------MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
M +KG +LDV YN I+ G+ + E++ M +P+T
Sbjct: 313 CRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNT 372
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ CK ++ A ++ L G P+ TF + I LC + N + A ++F+E
Sbjct: 373 VTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEE 432
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD T +L+E L ++++KEA +++ ++
Sbjct: 433 MKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEME 469
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 36/234 (15%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
FDQM+ LG RS +++N L+ +S+ ++ L D++ + L PDK +Y +LK C
Sbjct: 500 FDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME-GLKPDKFTYTTMLKYFC 558
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G +A +++ M G E VTY T++ L K G + A +L ++ KG+ L
Sbjct: 559 QQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQ 618
Query: 240 AYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
AYN I CK + EA +++ +
Sbjct: 619 AYNPVI----------------------------------QALCKRKRTKEAMRLFREMM 644
Query: 300 ENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
E G P+ T++ LC G G +A E + +P+F + L EGL
Sbjct: 645 EKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGL 698
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 10/242 (4%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSP---DKISY 171
AM F++M E G +++ L+ + C+ RL + + +L K+ LS + + Y
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLL-----KEMELSGCARNVVVY 480
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C + A ++ ++ME GV ++VTY T++N L K EEA +L +M
Sbjct: 481 NTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIM 540
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+G+ D Y + GD +R +++ M G +PD ++Y L+ CK +D
Sbjct: 541 EGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDV 600
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A K+ ++ G + I LC +A ++F+E + PD T K++
Sbjct: 601 ASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFR 660
Query: 351 GL 352
GL
Sbjct: 661 GL 662
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 47/352 (13%)
Query: 67 LTVRRLAKSKRFSDIETLI----ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
+ V L K+F+ + + ESH + I E + + R+Y QA + D A+R+F++
Sbjct: 116 ILVEILGSCKQFAILWDFLTEMRESHHYE--INSEIFWL-IFRAYSQANLPDGAIRSFNR 172
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
MDE G ++ + LLF + + + LF + +++L+ +Y +L+ + G
Sbjct: 173 MDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAK--TYSILISGWGEIG 230
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S+KA +L M +G V + Y +L L K G +EA+ ++ +M K V+ D Y+
Sbjct: 231 DSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYS 290
Query: 243 VRITNTYGGDP------------------------------------ERLKELIDEMRDA 266
+ I + D E +L+DEM
Sbjct: 291 IFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISR 350
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G+KPDT SYN + +C + ++ A ++ +E++ C P+ T+ + L G FDK
Sbjct: 351 GVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKV 410
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKK-KIKEA-KGVIRTIKKKFPPNV 376
+V++ V P +T +++ G KKK K++EA K I + PP V
Sbjct: 411 TEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYV 462
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 117/241 (48%), Gaps = 4/241 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G SV+SF+ L+ + + + E+ + ++ + + L+ +++ + D
Sbjct: 106 GFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDG 165
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ N M+ GV+ T +L L K+ + ++A++L+ + K L Y++ I+
Sbjct: 166 AIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQ-AKNRFSLTAKTYSILIS 224
Query: 247 NTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+G GD E+ +L M + G D ++YN L+ CK +DEAK ++ +
Sbjct: 225 G-WGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVE 283
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+A T+ +I+ C + + A++V + + +P+ T +++ L K + ++EA +
Sbjct: 284 PDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQL 343
Query: 365 I 365
+
Sbjct: 344 L 344
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 144/281 (51%), Gaps = 7/281 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
AMR F +M G +V+++N L+ D+ L D++ +L P+ +++ +L+
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSS-DLEPNVVTHNVLI 305
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C + + ++A+ L N+ME +GV+ +TYTT+++ K G E+A L++ M +G+
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+V+ YN I GD + + L++EM L D ++YN L+ CK +A K+
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + E G +P+ T+ T + C GN A V K + T +L++G
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485
Query: 355 KKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEEL---GLVP 391
K ++++A G++ +++ PN ++ ++EE+ G VP
Sbjct: 486 KGRLEDANGLLNEMLERGLVPN-RTTYEIIKEEMMEKGFVP 525
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK---A 187
+VISFN ++ + ++ + +++ K + +SP+ I+Y L+ +C G K A
Sbjct: 154 NVISFNIVVNGLCKVGKLNRAGDVIEDM-KVWGVSPNVITYNTLIDGYCKMGRIGKMYKA 212
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+L EM KG+ VTY +++ K N A R++ EM+++G+ +V YN+ I
Sbjct: 213 DAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILING 272
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + L D+M + L+P+ +++N L+ +CKN+ ++EA ++ +E+ G PN
Sbjct: 273 LCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPN 332
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A T+ T I C G + A+ ++ + P+ +T L+ GL +K +K A+ ++
Sbjct: 333 AMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMN 392
Query: 367 -TIKKKFPPNVL 377
+ KK +V+
Sbjct: 393 EMVSKKLSADVV 404
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 2/262 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G D A+ DQM +V++ N L+ +++ ++ LF+++ K+
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ- 327
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y L+ ++C G + A L N M ++G+ TY ++ L ++G+ + A
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +EM K + DV YN+ I + G+ + +L+DEM + GL P ++YN LM
Sbjct: 388 RSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ + A V +E G N T I C G + A + E + +P+
Sbjct: 448 YCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507
Query: 342 FNTVKLLVEGLVKKKKIKEAKG 363
T +++ E +++K + + +G
Sbjct: 508 RTTYEIIKEEMMEKGFVPDIEG 529
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 9/265 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSR---LYDKVPILFDEI 158
++ + G + A + M G +VI++N L+ C R +Y IL + +
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + P++++Y +L+ C + A+ + EM+ +G+ VTY ++N L G
Sbjct: 221 AK--GICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGK 278
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYN 276
+EA L +M ++ +V +NV I N + + L ++M G+ P+ ++Y
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLI-NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ YCK+ M++A +Y + + G P +T+ I LC G+ A + E V
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
D T +L++ L KK + ++A
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKA 422
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
EM ++ + IS+N ++ CK ++ A V E ++ G SPN T+ T I C G
Sbjct: 145 EMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMG 204
Query: 322 NFDKAYK---VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
K YK + KE V P+ T +L++G K + + A V ++++ PNV+
Sbjct: 205 RIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVV 264
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 160/377 (42%), Gaps = 48/377 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL++ S + + P Y ++ V L+K + LIE N + Y
Sbjct: 232 DQALELLSEMQERGCYPNDVTY--NVLVNGLSKKGELEQAKGLIEEMLNS-GLNVSAYTY 288
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRS----------------------------- 131
N LI + Q G+F A FD ++E+ R+
Sbjct: 289 NPLINGFCQKGLFVEA---FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345
Query: 132 ---------VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
++SFN+LL+ R+ + +LFDE+ K +L P I+Y L+ C G
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPTVITYNTLIHGLCMWG 404
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D AL L EM ++G+ TYT ++N +K G A ++EM KG+ D AYN
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
RI D + +EM AG PD I+YN + C+ +EA + E + +
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ T+ + I +G+ KA +VF E + P T +L+ K+ + A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584
Query: 362 KGVI-RTIKKKFPPNVL 377
+ ++K P NV+
Sbjct: 585 FMYFSKMLEKSVPANVI 601
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+ FD+M G V + N +L L K ++ + +++ + P ++Y +L
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMM-EQFGIKPTVVTYNTML 222
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
S+C G D+ALELL+EM+ +G VTY ++N L K+G E+A+ L EM G++
Sbjct: 223 DSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282
Query: 236 LDVAAYNVRIT-----NTYGGDPERLKELID----------------------------- 261
+ YN I + + ++E+++
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLR 342
Query: 262 --EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+M + PD +S+N L+ YC+ + EA +++ L+ P T+ T I+ LC
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G D A ++ KE PD T +LV G K + A+G + K
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 16/231 (6%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD I+Y + + + C G+ ++A +LL M + G+ VTYT+++N K G+ +A +
Sbjct: 493 PDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREV 552
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID-------EMRDAGLKPDTISYNFL 278
++EM KGV V Y V I K+++D +M + + + I+YN +
Sbjct: 553 FNEMLSKGVAPSVVTYTVLI------HAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C MDEA K ++ +EE G PN ++ I C G +++A ++++E +
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGV---IRTIKKKFPPNVLRAWKKVEEE 386
PD T + ++ L + ++ + V I+ ++ +LR K V EE
Sbjct: 667 QPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINVRLLRPRKNVMEE 717
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
++M G P VI++N + A + +++ L + + L PD ++Y ++
Sbjct: 484 EEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD-GLIPDHVTYTSIINGFVK 542
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G KA E+ NEM +KGV + VTYT +++ + + A +S+M +K V +V
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602
Query: 241 YNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN I R+ E DEM + G+ P+ SY L+ C +EA ++Y
Sbjct: 603 YNAIINGL--CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660
Query: 298 LEENGCSPNATTFRTWIYHL 317
+ + P++ T ++ +L
Sbjct: 661 MLDRKIQPDSFTHSVFLKNL 680
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
++FD++ + L PD + +L+ D KA + ME G++ T VTY T+L+
Sbjct: 166 LVFDKMIRN-GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDT 272
K+G ++A EL+ EM++ G P+
Sbjct: 225 YCKEGRVDQA----------------------------------LELLSEMQERGCYPND 250
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ K +++AK + E + +G + +A T+ I C G F +A+ + +E
Sbjct: 251 VTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEE 310
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
V P +T L+ GL K ++ + +K KF P+++
Sbjct: 311 MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ M D A F +M E P +VI++NA++ +R D+ FDE+ +K
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEK- 629
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+ P+K SY +L+ C+ G ++AL L EM ++ ++ + T++ L L++
Sbjct: 630 GILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 145/323 (44%), Gaps = 6/323 (1%)
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
P +SR L ++ K + E LI E LI +Y AG D A+
Sbjct: 323 PENSR-TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDAL 381
Query: 118 RTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
R D M ++G + + N+L+ C + +L K +NL PD Y LL
Sbjct: 382 RIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSM--KDWNLKPDSYGYNTLLD 439
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
C KA +L +EM NKGV T VTY T+L L+ G+ E A +W+ M K+GV
Sbjct: 440 GFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAP 499
Query: 237 DVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ Y + + G +R + + G YN ++ +CK E + +A++++
Sbjct: 500 NEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
++E G P+ T+RT I C GN +A K+ S L+ G+ +
Sbjct: 560 LKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRS 619
Query: 356 KKIKEAKGVIRTIK-KKFPPNVL 377
+++++ G++ +K ++ PNV+
Sbjct: 620 EELQKLNGLLAEMKNRELSPNVV 642
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 4/212 (1%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
A + SV KS LR + K +D + K + P+S+ ++ + L KSK D+
Sbjct: 709 AAHAHSVELPKSDLR-HLETQKIVDSFGK--KAMSIPISNNIVYNIAITGLCKSKNIDDV 765
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
++ C+LI + G + A D M G +++ +NAL+
Sbjct: 766 RRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALING 825
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+S D+ LF+++ +K LSP ++Y L+ +C G + +ALEL ++M +G+
Sbjct: 826 LCKSGNLDRARRLFNKLARK-GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICP 884
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
+++TY+T+++ LY +G +E++ L +EM K G
Sbjct: 885 SSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ + + GM A+ FD M + G S+ S N+LL ++ K ++++++
Sbjct: 192 ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIA-L 250
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +++ ++C G D+A + EME E VTY ++++ G+ A
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ + M +KG+ + Y + I G E+ ++LI M + L D Y L+
Sbjct: 311 KKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHA 370
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC +D+A ++ + + + G N + I C G+ +KA +V + PD
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPD 430
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
L++G K++ +A
Sbjct: 431 SYGYNTLLDGFCKQEDFIKA 450
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 43/246 (17%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
C L+ ++ + G FD AM + G +S+ +N ++ C +L I
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM-- 562
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ PD+I+Y L+ +C G+ +AL+L + E G+ +T Y +++ +++ +
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFR---S 619
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EE + +L L+ EM++ L P+ ++Y L+
Sbjct: 620 EELQ-------------------------------KLNGLLAEMKNRELSPNVVTYGSLI 648
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C MMD+A Y + + G +PN + L G D+A ++++H+I
Sbjct: 649 AGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEA------NLILHQI 702
Query: 340 PDFNTV 345
D + +
Sbjct: 703 ADIDPI 708
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 128/299 (42%), Gaps = 30/299 (10%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + GM D A + +M + G ++I + ++ + R D+ ++ +I
Sbjct: 646 SLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIA-- 703
Query: 162 YNLSPDKISYGLLLKSHCDS----GSSDKALE---LLNEMENKGVEV---TTVTYTTVLN 211
++ P + +H S S + LE +++ K + + + Y +
Sbjct: 704 -DIDP--------IAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAIT 754
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
L K N ++ R+ S++ KG D Y I G L D+M +AGL P
Sbjct: 755 GLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVP 814
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ + YN L+ CK+ +D A++++ L G SP T+ T I C G +A ++
Sbjct: 815 NIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALEL- 873
Query: 331 KESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK------FPPNVLRAWKK 382
K+ + I P T L+ GL + K +++ G++ + K P V RA+ K
Sbjct: 874 KDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGSSVMDPLVARAYVK 932
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%)
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+ D M G P S N L++ +N +A VYE + G P+ ++ + C
Sbjct: 208 VFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYC 267
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLR 378
G D+A+ KE P+ T L++G V + AK V+ + +K P R
Sbjct: 268 KEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSR 327
Query: 379 AW 380
+
Sbjct: 328 TY 329
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 131/251 (52%), Gaps = 2/251 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + FD+M E G +++++N L+ R ++ + D++ K Y ++P+ I+Y L+
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSYVINPNLITYNTLI 345
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G KAL L +++++G+ + VTY +++ ++G+ A ++ EME++G+
Sbjct: 346 DGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 236 LDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
Y + I T + E +L M + GL PD +Y+ L+ +C M+EA ++
Sbjct: 406 PSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + E PN + T I C G+ +A ++F++ P+ + L+ L K
Sbjct: 466 FKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCK 525
Query: 355 KKKIKEAKGVI 365
++K+KEA+ ++
Sbjct: 526 ERKLKEAEDLV 536
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +Y Q+ D ++ F++M + G FN LL S +++ F+E K
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE--SKI 157
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D S+G+++K C++G +K+ +LL E+ G V YTT+++ K+G E+A
Sbjct: 158 KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ EM K G+ + Y V I + G ++ E+ ++M++ G+ P+ +YN +M
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQ 277
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ +A KV++ + E G S N T+ T I LC ++A KV + P+
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPN 337
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++G K+ +A + R +K +
Sbjct: 338 LITYNTLIDGFCSVGKLGKALSLCRDLKSR 367
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 18/284 (6%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+ ++Y + +H P + Y + + +L K R D + K ++ + CN
Sbjct: 251 QGFEMYEKMQEHGVFP--NLYTYNCVMNQLCKDGRTKD------AFKVFDEMRERGVSCN 302
Query: 103 LIRSYGQAGMF------DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
++ G + A + DQM ++I++N L+ C+ +L + +
Sbjct: 303 IVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCR 362
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D K LSP ++Y +L+ C G + A +++ EME +G++ + VTYT +++ +
Sbjct: 363 D--LKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
N E A +L S ME+ G+ DV Y+V I G L M + L+P+ +
Sbjct: 421 SDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVI 480
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
YN ++ YCK A +++ +EE +PN ++ I LC
Sbjct: 481 YNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLC 524
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 140/279 (50%), Gaps = 9/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G+ +++M E G ++ ++N ++ C R D + FDE+ ++
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKV-FDEMRER 297
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + ++Y L+ C +++A +++++M++ + +TY T+++ G +
Sbjct: 298 -GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGK 356
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +++ +G+ + YNV ++ GD +++ EM + G+KP ++Y L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +++ M+ A ++ +EE G P+ T+ I+ C G ++A ++FK MV K+
Sbjct: 417 TFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS--MVEKML 474
Query: 341 DFNTV--KLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
+ N V ++ G K+ A + R + +K+ PNV
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNV 513
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 42/246 (17%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVE---------VTTVTYTTVLN---CLYKQ-- 216
Y +++ ++ S S D ++ NEM +KG +T V ++ N C + +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 217 --------------------GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPER 255
G E++ L E+ + G +V Y I G+ E+
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
K+L EM GL + +Y L+ KN + + ++YE ++E+G PN T+ +
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276
Query: 316 HLCGSGNFDKAYKVF---KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
LC G A+KVF +E + I +NT L+ GL ++ K EA V+ +K
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT---LIGGLCREMKANEANKVMDQMKSYV 333
Query: 372 FPPNVL 377
PN++
Sbjct: 334 INPNLI 339
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ ++ + A++ M+ELG V +++ L+ C + ++ ++ LF + +K
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQM-NEASRLFKSMVEK 472
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+++ Y ++ +C GSS +AL L +ME K + +Y+ ++ L K+ +E
Sbjct: 473 M-LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKE 531
Query: 222 AERLWSEMEKKGVD 235
AE L +M G+D
Sbjct: 532 AEDLVEKMIDSGID 545
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 70/379 (18%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE 86
S ++ + + S+ DP A +I+ S+ + SR + + + +L + + F+ I+ ++
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQ-PNFRHSRSSHLILILKLGRGRYFNLIDDVLA 108
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG-TPRS---------VISFN 136
H++ LI+ Y +A + + + TF +M E TP+ ++S
Sbjct: 109 KHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHR 168
Query: 137 ALL---FACTRS-RLYDKVP------------ILFDEIPKKYNL---------SPDKISY 171
L F +S RL+ +P L D++ Y L PD SY
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+L++ C G + A+ELL++M NKG ++YTT+LN L ++ EA +L M+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
KG + PD + YN ++ +C+ + +A
Sbjct: 289 KGCN----------------------------------PDLVHYNTMILGFCREDRAMDA 314
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+KV + + NGCSPN+ ++RT I LC G FD+ K +E + P F+ LV+G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 352 LVKKKKIKEAKGVIRTIKK 370
K++EA V+ + K
Sbjct: 375 FCSFGKVEEACDVVEVVMK 393
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 62/124 (50%)
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
++ G ++ EL R G+ P+T SYN LM +C N+ + A +++ + E P+
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+++ I C G + A ++ + + +PD + L+ L +K +++EA ++
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 368 IKKK 371
+K K
Sbjct: 286 MKLK 289
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 145/280 (51%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LIR + AG D A++ ++M G + + L+ C R+ + + F + K
Sbjct: 63 LIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALE-HFRAMAK- 120
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +PD ++Y L+ + C +G D+A +L EM +G TVT++T+++ L K G+ E+
Sbjct: 121 -DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179
Query: 222 AERLWSEMEKKGVDLDVAAYNV---RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A R+ ++ ++G+ AA+ R+ N Y E +++ + G P + +N +
Sbjct: 180 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYN-SVELASKVLGVVIAKGFTPTVLMFNLV 238
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + +D A K+ E + E GC PN TF I LC + +A ++ ++ VM
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGC 298
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T ++ GL K+ ++ +A + + ++++ PPNV+
Sbjct: 299 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVV 338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 153/363 (42%), Gaps = 41/363 (11%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+AL ++ + P +++ + +R + + L+E K+
Sbjct: 40 EALALFRNAMARICMP--NKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTT 97
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++ AG A+ F M + P V+++ AL+ A ++ +D+ + E+ +
Sbjct: 98 LMKGLCDAGRVVEALEHFRAMAKDCAP-DVMTYTALVHALCKAGKFDEAQGMLREMVAQ- 155
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG---------------------VEV 201
+PD +++ L+ C GS ++A +L ++ +G VE+
Sbjct: 156 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 215
Query: 202 ---------------TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
T + + V+N K + + A +L M +KG +V + + IT
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275
Query: 247 NTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ ++L+++M G P+ ++Y+ ++ CK +D+A ++++ +E C P
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 335
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T I LC + ++A +++ PD T L++GL K ++ EA +
Sbjct: 336 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLF 395
Query: 366 RTI 368
+TI
Sbjct: 396 QTI 398
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 156/356 (43%), Gaps = 20/356 (5%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
++ S + L + D A +++ + + P + ++ + L K+KR + L
Sbjct: 303 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPP--NVVTHNILIDGLCKAKRIEEARQLY 360
Query: 86 ----ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLF 140
E+ IT + L +S+ D A + F + E G + + ++++ L
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKSF----QVDEAFQLFQTIPESGVSAANAVTYSTLFH 416
Query: 141 A-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
R+ D I + K + SPD +Y L+ +C + + + +EL+ EM +KG
Sbjct: 417 GYAALGRMADACRIFSMLVDKGF--SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER---- 255
T + VL L++ + E A +L+ M +G D YN+ +
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534
Query: 256 -LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
L+++ID+ RD P + + + L+ C+ D+AK++ + E G + +++ +
Sbjct: 535 VLEQVIDK-RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
L +D+A +VF+ V P+ +TV +++ L K+ +A +++ + K
Sbjct: 594 SGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 649
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN--LSPDKISY 171
+ A++ FD M G + +N ++ R+ +DK + +++ K + +P +
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L++S C G +D A +LL++M +G +Y +L+ L + +EA +++
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVF----- 609
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ M AG P+ + N +++ C +D+A
Sbjct: 610 -----------------------------EAMVSAGPAPEISTVNVVISWLCSAAKVDDA 640
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
++ + + + GC P+ T T I C SG D A K+ +E P+ T LL
Sbjct: 641 YELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 148/326 (45%), Gaps = 15/326 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQE 97
D AL Y + +H A V + + V L KS R SD +E +IE+ +T
Sbjct: 85 DSALVHYRDMQRHCAPSVIT---YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYN 141
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
LI + + G D A+ F+QM E V ++N L+ C + R D +L +
Sbjct: 142 ----TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQE 197
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ KY P+ I+Y L+ S SG A L M + + + T+ +++ K
Sbjct: 198 MV--KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 255
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISY 275
G + A L+ M +G D+ YN+ I+ + + ++L++ M +AG PD ++Y
Sbjct: 256 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 315
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N +++ CK +DEA +VYE L G + T T I LC S D A K+ +E
Sbjct: 316 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 375
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
PD +L+ G K ++ ++
Sbjct: 376 NGSAPDVVAYTILIHGFCKADQLDKS 401
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
SPD I+Y L+ C + +A LL+EME +G+ Y T++ L G + A
Sbjct: 30 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 225 LWSEMEKKG--------VDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
+ +M++ + +D + RI++ ++++M +AG P+ ++YN
Sbjct: 90 HYRDMQRHCAPSVITYTILVDALCKSARISDA--------SLILEDMIEAGCAPNVVTYN 141
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ +CK MDEA ++ + EN CSP+ T+ I C K+ +E V
Sbjct: 142 TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY 201
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+F T L++ LVK K +A + + + ++
Sbjct: 202 GCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 236
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDE 262
++TY+T++N K + ++A RL EMEK+G+ A YN I D R+ +
Sbjct: 33 SITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGL--CDNGRVDSALVH 90
Query: 263 MRDAG--LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
RD P I+Y L+ CK+ + +A + E + E GC+PN T+ T I C
Sbjct: 91 YRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE-AKGVIRTIKKKFPPNVL 377
GN D+A +F + + PD T +L++G K+++ ++ AK + +K PN +
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 2/201 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A F M + G + ++N ++ R+ D L + + +
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA- 306
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y ++ C + D+A E+ + N G + VT +T+++ L K ++A
Sbjct: 307 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 366
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+L EME+ G DV AY + I D ++ EM D G P I+Y+ ++
Sbjct: 367 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 426
Query: 282 YCKNEMMDEAKKVYEGLEENG 302
CK+ + + + + + E G
Sbjct: 427 LCKSARVRDGCMLLKTMLERG 447
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ + ++ R D L+E +++ +A D A ++
Sbjct: 278 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 337
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+ G V++ + L+ +SR D L E+ + + +PD ++Y +L+ C +
Sbjct: 338 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGS-APDVVAYTILIHGFCKAD 396
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
DK+L +EM +KG T +TY+ V++ L K + L M ++GV
Sbjct: 397 QLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 49/102 (48%)
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L++ + + + EA +++ CSP++ T+ T I C + +F +AY++ E
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+P +++GL ++ A R +++ P+V+
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVI 103
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M++ V+ + +++ + + R + LF E+ +
Sbjct: 170 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ- 228
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP +Y L+ + C+ LLNEM N + V ++TV++ L K+G EA
Sbjct: 229 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 288
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M K+GV+ +V YN + + + + ++ D M G PD +SY+ L+
Sbjct: 289 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 348
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +++A ++E + PN T+ T ++ LC G A +F E V +IPD
Sbjct: 349 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 408
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
F + +L++ L K +++ EA +++ I+
Sbjct: 409 FVSYCILLDYLCKNRRLDEAIALLKAIE 436
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 141/319 (44%), Gaps = 10/319 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +++S + SP S + + + L + + L+ N +
Sbjct: 217 QAFNLFSEMIHQGISP--SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ + + G A D M + G +V+++NAL+ C RS + + V + FD + K
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV-FDTMVCK 333
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD +SY L+ +C +KA+ L EM K + TVTY+T+++ L G ++
Sbjct: 334 -GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 392
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ EM +G D +Y + + Y RL E L+ + + + PD Y +
Sbjct: 393 AIALFHEMVTRGQIPDFVSYCILLD--YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 450
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+ ++ A+ ++ L G PN T+ I LC G +A K+F E
Sbjct: 451 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510
Query: 339 IPDFNTVKLLVEGLVKKKK 357
P+ T L+ G ++ +
Sbjct: 511 SPNGCTYNLITRGFLRNNE 529
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 35 LRSEFDPDKALDIYSS-VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
LRSE D +A+ ++ + V K +A V S Y+ + K +R L E
Sbjct: 316 LRSEMD--EAVKVFDTMVCKGFAPDVVS-YST--LINGYCKIQRIEKAMYLFEEMCRKEL 370
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVP 152
I L+ G A+ F +M G +S+ LL + C RL + +
Sbjct: 371 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 430
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+L + + N+ PD Y +++ C +G + A +L + + +KG+ TYT ++N
Sbjct: 431 LL--KAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 488
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKP 270
L +QG EA +L+ EM++KG + YN+ IT + + E L+ +L+ EM G
Sbjct: 489 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNL-ITRGFLRNNETLRGIQLLQEMLARGFSA 547
Query: 271 DT 272
D
Sbjct: 548 DV 549
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + + AM F++M + ++++ L+ C RL D + LF E+ +
Sbjct: 345 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA-LFHEMVTR 403
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +SY +LL C + D+A+ LL +E ++ YT V++ + + G E
Sbjct: 404 GQI-PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 462
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+S + KG+ +V Y + I G +L EM+ G P+ +YN +
Sbjct: 463 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITR 522
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+ +N ++ + + G S + +T + L G D++ K
Sbjct: 523 GFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LDQSVK 569
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 72 LAKSKRFSDIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L K++R + L IE DP I + I +AG + A F + G
Sbjct: 419 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV---IDGMCRAGELEAARDLFSNLSSKGL 475
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+V ++ ++ + L + LF E+ +K SP+ +Y L+ + + + + +
Sbjct: 476 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK-GYSPNGCTYNLITRGFLRNNETLRGI 534
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+LL EM +G T T ++ L G + +++ SE
Sbjct: 535 QLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 574
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M++ V+ + +++ + + R + LF E+ +
Sbjct: 179 LINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ- 237
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP +Y L+ + C+ LLNEM N + V ++TV++ L K+G EA
Sbjct: 238 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 297
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M K+GV+ +V YN + + + + ++ D M G PD +SY+ L+
Sbjct: 298 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 357
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +++A ++E + PN T+ T ++ LC G A +F E V +IPD
Sbjct: 358 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 417
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
F + +L++ L K +++ EA +++ I+
Sbjct: 418 FVSYCILLDYLCKNRRLDEAIALLKAIE 445
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 141/319 (44%), Gaps = 10/319 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +++S + SP S + + + L + + L+ N +
Sbjct: 226 QAFNLFSEMIHQGISP--SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ + + G A D M + G +V+++NAL+ C RS + + V + FD + K
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKV-FDTMVCK 342
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD +SY L+ +C +KA+ L EM K + TVTY+T+++ L G ++
Sbjct: 343 -GFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 401
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ EM +G D +Y + + Y RL E L+ + + + PD Y +
Sbjct: 402 AIALFHEMVTRGQIPDFVSYCILLD--YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 459
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+ ++ A+ ++ L G PN T+ I LC G +A K+F E
Sbjct: 460 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519
Query: 339 IPDFNTVKLLVEGLVKKKK 357
P+ T L+ G ++ +
Sbjct: 520 SPNGCTYNLITRGFLRNNE 538
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 12/242 (4%)
Query: 35 LRSEFDPDKALDIYSS-VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
LRSE D +A+ ++ + V K +A V S Y+ + K +R L E
Sbjct: 325 LRSEMD--EAVKVFDTMVCKGFAPDVVS-YST--LINGYCKIQRIEKAMYLFEEMCRKEL 379
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVP 152
I L+ G A+ F +M G +S+ LL + C RL + +
Sbjct: 380 IPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIA 439
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+L + + N+ PD Y +++ C +G + A +L + + +KG+ TYT ++N
Sbjct: 440 LL--KAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMING 497
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKP 270
L +QG EA +L+ EM++KG + YN+ IT + + E L+ +L+ EM G
Sbjct: 498 LCQQGLLAEASKLFGEMKRKGYSPNGCTYNL-ITRGFLRNNETLRGIQLLQEMLARGFSA 556
Query: 271 DT 272
D
Sbjct: 557 DV 558
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + + AM F++M + ++++ L+ C RL D + LF E+ +
Sbjct: 354 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA-LFHEMVTR 412
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +SY +LL C + D+A+ LL +E ++ YT V++ + + G E
Sbjct: 413 GQI-PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 471
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+S + KG+ +V Y + I G +L EM+ G P+ +YN +
Sbjct: 472 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITR 531
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+ +N ++ + + G S + +T + L G D++ K
Sbjct: 532 GFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG-LDQSVK 578
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 72 LAKSKRFSDIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L K++R + L IE DP I + I +AG + A F + G
Sbjct: 428 LCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV---IDGMCRAGELEAARDLFSNLSSKGL 484
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+V ++ ++ + L + LF E+ +K SP+ +Y L+ + + + + +
Sbjct: 485 HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK-GYSPNGCTYNLITRGFLRNNETLRGI 543
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+LL EM +G T T ++ L G + +++ SE
Sbjct: 544 QLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSE 583
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 160/377 (42%), Gaps = 48/377 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL++ S + + P Y ++ V L+K + LIE N + Y
Sbjct: 232 DQALELLSEMQERGCYPNDVTY--NVLVNGLSKKGELEQAKGLIEEMLNS-GLNVSAYTY 288
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRS----------------------------- 131
N LI + Q G+F A FD ++E+ R+
Sbjct: 289 NPLINGFCQKGLFVEA---FDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345
Query: 132 ---------VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
++SFN+LL+ R+ + +LFDE+ K +L P I+Y L+ C G
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL-KCRDLVPTVITYNTLIHGLCMWG 404
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D AL L EM ++G+ TYT ++N +K G A ++EM KG+ D AYN
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
RI D + +EM AG PD I+YN + C+ +EA + E + +
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ T+ + I +G+ KA +VF E + P T +L+ K+ + A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584
Query: 362 KGVI-RTIKKKFPPNVL 377
+ ++K P NV+
Sbjct: 585 FMYFSKMLEKSVPANVI 601
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+ FD+M G V + N +L L K ++ + +++ + P ++Y +L
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMM-EQFGIKPTVVTYNTML 222
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
S+C G D+ALELL+EM+ +G VTY ++N L K+G E+A+ L EM G++
Sbjct: 223 DSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLN 282
Query: 236 LDVAAYNVRIT-----NTYGGDPERLKELID----------------------------- 261
+ YN I + + ++E+++
Sbjct: 283 VSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLR 342
Query: 262 --EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+M + PD +S+N L+ YC+ + EA +++ L+ P T+ T I+ LC
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G D A ++ KE PD T +LV G K + A+G + K
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD I+Y + + + C G+ ++A +LL M + G+ VTYT+++N K G+ +A +
Sbjct: 493 PDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREV 552
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID-------EMRDAGLKPDTISYNFL 278
++EM KGV V Y V I K+++D +M + + + I+YN +
Sbjct: 553 FNEMLSKGVAPSVVTYTVLI------HAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C MDEA K ++ +EE G PN ++ I C G +++A ++++E +
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD T + ++ L + ++ + V I+
Sbjct: 667 QPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ 697
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
++M G P VI++N + A + +++ L + + L PD ++Y ++
Sbjct: 484 EEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD-GLIPDHVTYTSIINGFVK 542
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G KA E+ NEM +KGV + VTYT +++ + + A +S+M +K V +V
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602
Query: 241 YNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN I R+ E DEM + G+ P+ SY L+ C +EA ++Y
Sbjct: 603 YNAIINGL--CMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYRE 660
Query: 298 LEENGCSPNATTFRTWIYHL 317
+ + P++ T ++ +L
Sbjct: 661 MLDRKIQPDSFTHSVFLKNL 680
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
++FD++ + L PD + +L+ D KA + ME G++ T VTY T+L+
Sbjct: 166 LVFDKMIRN-GLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDT 272
K+G ++A EL+ EM++ G P+
Sbjct: 225 YCKEGRVDQA----------------------------------LELLSEMQERGCYPND 250
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ K +++AK + E + +G + +A T+ I C G F +A+ + +E
Sbjct: 251 VTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEE 310
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
V P +T L+ GL K ++ + +K KF P+++
Sbjct: 311 MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIV 356
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ V L + F + L+E+ +D I ++I + + G A F++M
Sbjct: 499 NVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLS 558
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G SV+++ L+ A ++ D + F ++ +K ++ + I+Y ++ C + D
Sbjct: 559 KGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEK-SVPANVITYNAIINGLCMTRRMD 617
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A + +EME KG+ +YT ++N G EEA RL+ EM + + D ++V +
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677
Query: 246 TNTY 249
N +
Sbjct: 678 KNLH 681
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ M D A F +M E P +VI++NA++ +R D+ FDE+ +K
Sbjct: 571 LIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEK- 629
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+K SY +L+ C+ G ++AL L EM ++ ++ + T++ L L++
Sbjct: 630 GILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAV 689
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+ + S ++ ++ NVRI GG
Sbjct: 690 QCVESLIQNVEDNI-----NVRIEMLIGG 713
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+E E KN + + +I+ Y + D A + ++ + I+ A F
Sbjct: 90 LELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGF 149
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
C R+ + +L D + KK + PD +++ +++ C +G +A E+L + + G
Sbjct: 150 -CKAQRVDEAYQLLLDMVEKK-SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCV 207
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG--VDLDVAAYNVRITNTYGGDP-ERLK 257
VTYTT+++ K GN EA +L+ + + + +V +N I+ D E
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAF 267
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
EL+ +M+ L+ DT +Y LM CK E +V+E + GC+P+ T+ T ++
Sbjct: 268 ELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAH 327
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
C +G+ A +V + V PD T +L+EGL + K++ A + ++++ PP
Sbjct: 328 CKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S QAG D AM F + +P SVI+ N L+ +L DK LF E+ K +
Sbjct: 44 LLASLCQAGKMDQAMAIFRGIQ--CSP-SVITLNILINGFCELQLLDKALELFHEMEKNF 100
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y ++K +C D+A +LL E +V + T+V K +EA
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAI--TSVARGFCKAQRVDEA 158
Query: 223 ERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L +M EKK D+ A+NV I G E+++ + G P+ ++Y L+
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218
Query: 281 CYCKNEMMDEAKKVYEGL--EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+CK+ + EA ++++ L ++ PN TF I LC + + A+++ K+
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
D T L++GL K+ + E V +++ P+V+
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 2/257 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
+I + +AG A + + +G + +++ L+ +S + LF + +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ P+ +++ L+ C + + A EL+ +M+ + + T TYTT+++ L KQG E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
R++ EM ++G + V Y + + G + +++I M G+ PD +Y L+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+N + A + +E + C P A + + C + D+A K + E + P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 341 DFNTVKLLVEGLVKKKK 357
D T KLLVE L K+ +
Sbjct: 421 DPATCKLLVEMLCKRGR 437
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 125/281 (44%), Gaps = 50/281 (17%)
Query: 133 ISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS------- 184
+F+ L+ C RL + V ++++ +++ + P+ LLL S C +G
Sbjct: 4 FTFSVLIAGLCKAGRLGEAVEC-YNQMLERHCV-PNLRDINLLLASLCQAGKMDQAMAIF 61
Query: 185 -------------------------DKALELLNEME-NKGVEVTTVTYTTVLNCLYKQGN 218
DKALEL +EME N + TYT ++ C K
Sbjct: 62 RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKE----LIDEMRDAGLKPDT 272
++A +L E D+ + IT+ G +R+ E L+D + KPD
Sbjct: 122 LDQARQLLEESSCCSSDV------IAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK- 331
+++N ++ +CK + EA ++ E L GC PNA T+ T I C SGN +A ++FK
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKV 235
Query: 332 -ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
S H P+ T L+ GL K +++ A +++ +K +
Sbjct: 236 LSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR 276
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 10/267 (3%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A ++ + K+ R + ++E+ + + LI + ++G A++ F +
Sbjct: 177 AWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVL 236
Query: 124 ---DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP--KKYNLSPDKISYGLLLKSH 178
D P +V++FNAL+ ++ D++ F+ + K +L D +Y L+
Sbjct: 237 SSRDHHAEP-NVVTFNALISGLCKA---DRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G + + + EM +G + VTYTT+++ K G+ ++A+++ M KG+ DV
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352
Query: 239 AAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y V + + G E +++ P + Y+ L+ CK ++DEA K Y
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVE 412
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFD 324
+ + +P+ T + + LC G D
Sbjct: 413 MLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +++ L+ CK + EA + Y + E C PN + LC +G D+A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
F+ + P T+ +L+ G + + + +A + ++K F
Sbjct: 61 FRG---IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + +AG+ A+R D+M G V+++N LL C RL D +L +E+ ++
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL-NEM-RE 333
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++ L+ +C G DKAL+L + M N+ + VTY T+++ + +QG+ ++
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A LW +M + + + Y++ I ++ G E +DEM + G+ P+ ++YN ++
Sbjct: 394 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 453
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK-- 338
YC++ + + +K + + N SP+ T+ T I+ G DK + FK M+ K
Sbjct: 454 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH---GYIKEDKMHDAFKLLNMMEKEK 510
Query: 339 -IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +L+ G ++EA + + K
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 146/317 (46%), Gaps = 4/317 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ V K+ F ++ +I + ++ + +AG + AM D
Sbjct: 96 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 155
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++++N++L RS ++DK +F E+ + ++PD S+ +L+ C G
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTILIGGFCRVG 214
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
++AL++ EM ++G++ V+++ ++ ++G + A EM G+ D Y
Sbjct: 215 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 274
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I G + DEM G PD ++YN L+ CK + +A+ + + E
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ TF T I+ C G DKA ++F + PD T L++G+ ++ + +A
Sbjct: 335 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 394
Query: 362 KGVIRTIKKK--FPPNV 376
+ + + FP +V
Sbjct: 395 NDLWDDMHSREIFPNHV 411
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G + A++ + +M G ++SF+ L+ R D E+ + +
Sbjct: 206 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-RCF 264
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD + Y +++ C +G AL + +EM G VTY T+LN L K+ +A
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L +EM ++GV D+ + I G ++ +L D M + L+PD ++YN L+
Sbjct: 325 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 384
Query: 282 YCKNEMMDEAKKVYEGLE-----------------------------------ENGCSPN 306
C+ +D+A +++ + G PN
Sbjct: 385 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 444
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVI 365
T+ + I C SGN K K F + +MV+K+ PD T L+ G +K+ K+ +A ++
Sbjct: 445 IMTYNSIIKGYCRSGNVSKGQK-FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503
Query: 366 RTI-KKKFPPNVL 377
+ K+K P+V+
Sbjct: 504 NMMEKEKVQPDVV 516
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 8/265 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGT 128
L K +R D E L+ + P LC LI Y G D A++ FD M
Sbjct: 315 LCKERRLLDAEGLLNEMRER---GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++++N L+ R DK L+D++ + + P+ ++Y +L+ SHC+ G + A
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAF 430
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
L+EM NKG+ +TY +++ + GN + ++ +M V D+ YN I
Sbjct: 431 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 490
Query: 249 YGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
D +L++ M ++PD ++YN L+ + + + EA ++E + G P+
Sbjct: 491 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 550
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKE 332
T+ + I +GN +A+++ E
Sbjct: 551 YTYMSMINGHVTAGNSKEAFQLHDE 575
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 36/173 (20%)
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKE 258
EV T T +++ K ++ + + SEMEK+ V DV +NV + + GD E
Sbjct: 92 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L+D M GLKP ++YN V +GL C
Sbjct: 152 LVDSMVSKGLKPGIVTYN----------------SVLKGL-------------------C 176
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
SG +DKA++VFKE PD + +L+ G + +I+EA + + ++ +
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR 229
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D DKA D++ + P Y+ + + + + D ++ N +
Sbjct: 390 DLDKANDLWDDMHSREIFPNHVTYS--ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEI 158
++I+ Y ++G + +M +I++N L+ + +++D +L +
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL--NM 505
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+K + PD ++Y +L+ G+ +A + +M KG+E TY +++N GN
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 565
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKEL 259
++EA +L EM ++G + AA V+ N E LK++
Sbjct: 566 SKEAFQLHDEMLQRGKEKRRAAGTVQFVNIQ-NSAESLKQM 605
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+E E KN + + +I+ Y + D A + ++ + I+ A F
Sbjct: 90 LELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGF 149
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
C R+ + +L D + KK + PD +++ +++ C +G +A E+L + + G
Sbjct: 150 -CKAQRVDEAYQLLLDMVEKK-SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCV 207
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG--VDLDVAAYNVRITNTYGGDP-ERLK 257
VTYTT+++ K GN EA +L+ + + + +V +N I+ D E
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAF 267
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
EL+ +M+ L+ DT +Y LM CK E +V+E + GC+P+ T+ T ++
Sbjct: 268 ELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAH 327
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
C +G+ A +V + V PD T +L+EGL + K++ A + ++++ PP
Sbjct: 328 CKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPP 385
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 19/278 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A+ ++QM E ++ N LL + ++ D+ +F I
Sbjct: 9 LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI---- 64
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEME-NKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP I+ +L+ C+ DKALEL +EME N + TYT ++ C K ++
Sbjct: 65 QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQ 124
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKE----LIDEMRDAGLKPDTISY 275
A +L E D+ + IT+ G +R+ E L+D + KPD +++
Sbjct: 125 ARQLLEESSCCSSDV------IAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAW 178
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK--ES 333
N ++ +CK + EA ++ E L GC PNA T+ T I C SGN +A ++FK S
Sbjct: 179 NVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSS 238
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
H P+ T L+ GL K +++ A +++ +K +
Sbjct: 239 RDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR 276
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 10/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S QAG D AM F + +P SVI+ N L+ +L DK LF E+ K +
Sbjct: 44 LLASLCQAGTMDQAMAIFRGIQ--CSP-SVITLNILINGFCELQLLDKALELFHEMEKNF 100
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y ++K +C D+A +LL E +V + T+V K +EA
Sbjct: 101 ALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAI--TSVARGFCKAQRVDEA 158
Query: 223 ERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L +M EKK D+ A+NV I G E+++ + G P+ ++Y L+
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218
Query: 281 CYCKNEMMDEAKKVYEGL--EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+CK+ + EA ++++ L ++ PN TF I LC + + A+++ K+
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
D T L++GL K+ + E V +++ P+V+
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVV 318
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 2/257 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
+I + +AG A + + +G + +++ L+ +S + LF + +
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ P+ +++ L+ C + + A EL+ +M+ + + T TYTT+++ L KQG E
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSE 300
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
R++ EM ++G + V Y + + G + +++I M G+ PD +Y L+
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLE 360
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+N + A + +E + C P A + + C + D+A K + E + P
Sbjct: 361 GLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAP 420
Query: 341 DFNTVKLLVEGLVKKKK 357
D T KLLVE L K+ +
Sbjct: 421 DPATCKLLVEMLCKRGR 437
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 10/267 (3%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A ++ + K+ R + ++E+ + + LI + ++G A++ F +
Sbjct: 177 AWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVL 236
Query: 124 ---DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP--KKYNLSPDKISYGLLLKSH 178
D P +V++FNAL+ ++ D++ F+ + K +L D +Y L+
Sbjct: 237 SSRDHHAEP-NVVTFNALISGLCKA---DRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G + + + EM +G + VTYTT+++ K G+ ++A+++ M KG+ DV
Sbjct: 293 CKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDV 352
Query: 239 AAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y V + + G E +++ P + Y+ L+ CK ++DEA K Y
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVE 412
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFD 324
+ + +P+ T + + LC G D
Sbjct: 413 MLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +++ L+ CK + EA + Y + E C PN + LC +G D+A +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
F+ + P T+ +L+ G + + + +A + ++K F
Sbjct: 61 FRG---IQCSPSVITLNILINGFCELQLLDKALELFHEMEKNF 100
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKK 161
LI +YG++G FD A++ F+ M G +++++NA++ AC + + + +V +F+E+ +
Sbjct: 228 LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRN 287
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD+I+Y LL G + A L NEM ++G++ TY T+L+ + K G +
Sbjct: 288 -GVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDL 346
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + EM K + +V Y+ + + Y G E L +EM+ G+ D +SYN L+
Sbjct: 347 AYEIMLEMPGKKILPNVVTYST-MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLL 405
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ Y K ++A KV + + +G + T+ + G F++ +VFKE
Sbjct: 406 SIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVF 465
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P+ T L++ K +EA V R K+
Sbjct: 466 PNLLTYSTLIDVYSKGSLYEEAMEVFREFKQ 496
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 158/333 (47%), Gaps = 9/333 (2%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
+++S+ Y + V +A + KS F + + ES K +I + G
Sbjct: 212 TALSEGYGNTV---FAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACG 268
Query: 109 QAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+ G+ F + F++M G I++N+LL C+R L++ LF+E+ + + D
Sbjct: 269 KGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR-GIDQD 327
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y LL + C G D A E++ EM K + VTY+T+ + K G E+A L++
Sbjct: 328 VFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYN 387
Query: 228 EMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
EM+ G+ LD +YN + + Y G E ++ EM +G+K D ++YN L+ Y K
Sbjct: 388 EMKFLGIGLDRVSYNT-LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQ 446
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+E +V++ ++++ PN T+ T I +++A +VF+E D
Sbjct: 447 GKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLY 506
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L+ L K + A ++ + K+ PNV+
Sbjct: 507 SELINALCKNGLVDSAVLLLDEMTKEGIRPNVV 539
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G F+ A++ +M G + V+++NALL + +++V +F E+ KK
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM-KKD 462
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y L+ + ++A+E+ E + G++ V Y+ ++N L K G + A
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSA 522
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L EM K+G+ +V YN I + +G
Sbjct: 523 VLLLDEMTKEGIRPNVVTYN-SIIDAFG 549
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 2/180 (1%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
Y +AG + A+ +++M LG +S+N LL + ++ + E+ +
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS-GVKK 431
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D ++Y LL + G ++ + EM+ V +TY+T+++ K EEA ++
Sbjct: 432 DVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVF 491
Query: 227 SEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
E ++ G+ DV Y+ I G + L+DEM G++P+ ++YN ++ + ++
Sbjct: 492 REFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ YG+ G F+ R F +M + ++++++ L+ ++ LY++ +F E K+
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF-KQA 497
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L D + Y L+ + C +G D A+ LL+EM +G+ VTY ++++ + AE
Sbjct: 498 GLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G E K + + G +++ L++ Y K+ DEA KV+E ++ +G PN T+
Sbjct: 201 GKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTY 260
Query: 311 RTWIYHLCGSGN--FDKAYKVFKESVMVHKIPD 341
+ CG G F + ++F+E + PD
Sbjct: 261 NA-VIDACGKGGVEFKRVVEIFEEMLRNGVQPD 292
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 12/313 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL ++ + Y P Y + +R L K+ R + + + +
Sbjct: 247 DAHGALSLFEEMRHQYCRPDVFTYTE--LIRGLGKAGRIDEAYHFFCEMQREGCRPDTVF 304
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR-LYDKVPILFDEI 158
+ N+I G+AG D AM+ F +M+ L SV+++N ++ A S+ +VP F+ +
Sbjct: 305 MNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERM 364
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ +SP +Y +L+ C + +KA+ LL EM+ KG Y ++++ L K
Sbjct: 365 -KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 423
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISY 275
+ A L+ E+++ Y V I + G RL + I DEM G PD +Y
Sbjct: 424 YDLACELFQELKENCGSSSARVYAVMIKHL--GKAGRLDDAINMFDEMNKLGCAPDVYAY 481
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KE 332
N LM+ + M+DEA ++E+GC P+ ++ + L +G +A ++ K+
Sbjct: 482 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 541
Query: 333 SVMVHKIPDFNTV 345
S + + +NTV
Sbjct: 542 STVRPDVVSYNTV 554
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 147/308 (47%), Gaps = 14/308 (4%)
Query: 76 KRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+++ ++ +I+ +P P L +++R G A M A+ F Q+ +
Sbjct: 104 EQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQA 163
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N+++ Y+KV L++E+ + + PD ++Y L+ + C G D A++LLNEM
Sbjct: 164 YNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEM 223
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
+ G++ TT YT ++ +K +A A L+ EM + DV Y I G
Sbjct: 224 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGL--GKAG 281
Query: 255 RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
R+ E EM+ G +PDT+ N ++ K +D+A K+++ +E C P+ T+
Sbjct: 282 RIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYN 341
Query: 312 TWIYHLCGS----GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T I L S ++ KES + P T +L++G K ++++A ++
Sbjct: 342 TIIKALFESKSRASEVPSWFERMKESGIS---PSSFTYSILIDGFCKTNRMEKAMMLLEE 398
Query: 368 IKKK-FPP 374
+ +K FPP
Sbjct: 399 MDEKGFPP 406
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA+ + + + P + Y + L K+KR+ L + K + +
Sbjct: 390 EKAMMLLEEMDEKGFPPCPAAYCS--LIDALGKAKRYDLACELFQELKENCGSSSARVYA 447
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ G+AG D A+ FD+M++LG V ++NAL+ R+ + D+ + ++
Sbjct: 448 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM-QE 506
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD SY ++L +G +A+E+L+ M+ V V+Y TVL L G EE
Sbjct: 507 HGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEE 566
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A +L EM G + D+ Y+
Sbjct: 567 ASKLMKEMNTLGFEYDLITYS 587
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 147/370 (39%), Gaps = 49/370 (13%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL-----IESHKNDPKITQE 97
+A+ I+ + P++ Y + + L ++ + L E H +T
Sbjct: 144 QAITIFYQIKTRKCQPIAQAYNSMIIM--LMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 201
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
LI ++ + G D A++ ++M E+G + + L+ + LF+E
Sbjct: 202 A----LISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEE 257
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ +Y PD +Y L++ +G D+A EM+ +G TV ++N L K G
Sbjct: 258 MRHQY-CRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG 316
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP---------ERLKE---------- 258
++A +L+ EME V YN I + ER+KE
Sbjct: 317 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 376
Query: 259 ------------------LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
L++EM + G P +Y L+ K + D A ++++ L+E
Sbjct: 377 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE 436
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
N S +A + I HL +G D A +F E + PD L+ GL + + E
Sbjct: 437 NCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDE 496
Query: 361 AKGVIRTIKK 370
A +R +++
Sbjct: 497 ALSTMRRMQE 506
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++RS G + A R M G SV++FN L+ R RL + + +++PK +
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK-H 378
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY LL C D+A+E L M ++G VTY T+L L K G A+ A
Sbjct: 379 GCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAA 438
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +++ KG + YN I T G E EL++EMR GLKPD I+Y+ L+
Sbjct: 439 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG 498
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+DEA K++ +E P+A T+ + LC + +A V P
Sbjct: 499 LGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPT 558
Query: 342 FNTVKLLVEGL 352
T +L+EG+
Sbjct: 559 KATYTILIEGI 569
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 154/322 (47%), Gaps = 16/322 (4%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R K+++ + I ++E+ P + L I Y ++G D A++ ++M
Sbjct: 154 RSGKTRKATRIMEILENSGAVPDVITYNVL---IGGYCKSGEIDKALQVLERMS---VAP 207
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V+++N +L + C +L + + +L ++ ++ PD I+Y +L+++ C+ +A++
Sbjct: 208 DVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE--CYPDVITYTILIEATCNDSGVGQAMK 265
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL+EM KG + VTY ++N + K+G +EA + + M G +V +N+ + +
Sbjct: 266 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC 325
Query: 250 GG----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
D ERL L D +R G P +++N L+ C+ ++ A V E + ++GC P
Sbjct: 326 STGRWMDAERL--LADMLRK-GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP 382
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N+ ++ ++ C D+A + + V PD T L+ L K K A ++
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442
Query: 366 RTIKKKFPPNVLRAWKKVEEEL 387
+ K VL + V + L
Sbjct: 443 NQLSSKGCSPVLITYNTVIDGL 464
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%), Gaps = 11/281 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++RS +G AM D+ + VI++ L+ A + L DE+ KK
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK- 273
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y +L+ C G D+A++ LN M G + +T+ +L + G +A
Sbjct: 274 GCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDA 333
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-----NTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
ERL ++M +KG V +N+ I G R +++++M G P+++SYN
Sbjct: 334 ERLLADMLRKGCSPSVVTFNILINFLCRKRLLG----RAIDVLEKMPKHGCMPNSLSYNP 389
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +C+ + MD A + E + GC P+ T+ T + LC G D A ++ +
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P T +++GL K K + A ++ +++K P+++
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDII 490
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 13/348 (3%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRR--LAKSKRFSDIETL 84
SVS +KL++ + + S+VSK AS ++ R Q ++ L S
Sbjct: 39 SVSHHFTKLKATRSRKRLENRVSAVSKSEASGMNGRLQQIVSTPNGDLNGIGMESSSPNG 98
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
+ ++ + +L L+R+ G + ++ ++M G VI+ +L+ R
Sbjct: 99 VNGSRSFEEFASNIHLRKLVRN----GELEEGLKFLERMIYQGDIPDVIACTSLIRGFCR 154
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
S K + EI + PD I+Y +L+ +C SG DKAL++L M V V
Sbjct: 155 SGKTRKATRIM-EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVV 210
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDE 262
TY T+L L G +EA + ++ DV Y + I T G + +K L+DE
Sbjct: 211 TYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMK-LLDE 269
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
MR G KPD ++YN L+ CK +DEA K + GC PN T + +C +G
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ A ++ + + P T +L+ L +K+ + A V+ + K
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 12/278 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEP 98
D+A+ +++ + P + ++ +R + + R+ D E L+ P +
Sbjct: 296 DEAIKFLNNMPLYGCQP--NVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L N + + + A+ ++M + G + +S+N LL + + D+ I + EI
Sbjct: 354 ILINFL---CRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA-IEYLEI 409
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
PD ++Y LL + C G +D A+E+LN++ +KG +TY TV++ L K G
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 219 AEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
E A L EM +KG+ D+ Y+ +R G E +K + +M +KP ++YN
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIK-IFHDMEGLSIKPSAVTYN 528
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+M CK + A + E GC P T+ I
Sbjct: 529 AIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 125/234 (53%), Gaps = 4/234 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A T+ +M +V+++++++ A +++ DK + + + K
Sbjct: 210 VINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKN- 268
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +L +C SG + + LN+M + GVE VTY +++N L K G +A
Sbjct: 269 GVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKA 328
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G++ D+A Y + T G E + L+D M G++PD +N L+
Sbjct: 329 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVE-MHALLDLMVRNGIQPDHHVFNILIC 387
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y K E +D+A V+ + ++G +PN + T I LC SG+ D A F++ +
Sbjct: 388 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 441
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 127/276 (46%), Gaps = 9/276 (3%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
P LC LI +AG D + + G I+F LL C R D + I
Sbjct: 93 PDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDI 152
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVL 210
+ + + + PD S +LLK CD S +ALELL+ M + G V+YTTV+
Sbjct: 153 VLRRM-TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 211
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLK 269
N +K+G++++A + EM + + +V Y+ I ++ E+++ M G+
Sbjct: 212 NGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 271
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PD ++Y+ ++ YC + E + +G PN T+R+ + +LC +G KA K+
Sbjct: 272 PDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKI 331
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
F PD T + L++G K + E ++
Sbjct: 332 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 110/272 (40%), Gaps = 13/272 (4%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY--NLSPDKISYGL 173
A D++ G S+ SFN L R V LF+ + + ++PD +Y +
Sbjct: 42 ARHVLDELPLRGWGASIYSFNRTLTDVARDSPAAAVS-LFNRMARAGADEVTPDLCTYSI 100
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA-ERLWSEMEKK 232
L+ C +G D L + KG V +T+ +L L +A + + M +
Sbjct: 101 LIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTEL 160
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELIDEM------RDAGLKPDTISYNFLMTCYCKNE 286
DV + + + D R +E ++ + R G PD +SY ++ + K
Sbjct: 161 SCMPDVFSCTILLKGLC--DENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 218
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
D+A Y + SPN T+ + I LC + DKA +V V +PD T
Sbjct: 219 DSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYS 278
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
++ G + KE G + ++ PNV+
Sbjct: 279 SILHGYCSSGQPKEDIGTLNKMRSDGVEPNVV 310
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL--IESHKNDPKITQEPY 99
DKA+++ +++ K+ P Y+ L + + DI TL + S +P +
Sbjct: 256 DKAMEVLNTMVKNGVMPDCMTYSSILH-GYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRS 314
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
L N + G+ A + FD M + G + ++ LL T+ L + +L ++
Sbjct: 315 LMNYLCKNGRC---TKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL--DL 369
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ + PD + +L+ ++ D+A+ + ++M G+ V Y TV++ L K G+
Sbjct: 370 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 429
Query: 219 AEEAERLWSEMEKKGV 234
++A + +M +G+
Sbjct: 430 VDDAMLYFEQMIDEGL 445
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 148/287 (51%), Gaps = 4/287 (1%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
+ ++ L++S K D I ++ Y N LI + G+ A + FD+M G ++FN
Sbjct: 236 WKEVVALVDSMKED-GIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFN 294
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+LL ++R +++ + + + +P ++Y L+ ++ G ++ALEL EME
Sbjct: 295 SLLDVYGKARKHEEAIGVLKRM-ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEF 353
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPER 255
+G++ VTYTT+++ L + G + A +SEM + G ++ YN I + G
Sbjct: 354 RGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTE 413
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ + D++R AG PD +++N L++ + +N + E V++ +++ G P T+ + I
Sbjct: 414 MMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 473
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
G FD+A +++K + PD +T ++ L + + ++A+
Sbjct: 474 SYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAE 520
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 149/332 (44%), Gaps = 39/332 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K I + +LI SY + G+FD AM + +M E G + ++NA+
Sbjct: 447 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAV 506
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R +++ LF E+ + + PD++SY LL ++ ++ DK L ++ +
Sbjct: 507 LSALARGGRWEQAEKLFAEMVDR-DCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAER 565
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
+E T++ K N E E+ + E+ ++ LD+ N ++ YG
Sbjct: 566 IERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVS-IYGKNKMVKKV 624
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
GD E+ + ++ E++ +G++PD SYN ++
Sbjct: 625 EEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYA 684
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + M EA +++ ++ +G P+ T+ +I + F++A + + V P+
Sbjct: 685 YGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPN 744
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T +++G + ++ EAK + + K +P
Sbjct: 745 ERTFNSILQGYSRHGRMVEAKSFLSNLPKIYP 776
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA-EEAE 223
+PD +Y L+ + +G A+ + M + GV+ VTY V + K +E
Sbjct: 181 APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVV 240
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L M++ G++ D YN I+ G ++ DEM+ AG +PD +++N L+ Y
Sbjct: 241 ALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVY 300
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
K +EA V + +E GC+P+ T+ + I G ++A ++ +E PD
Sbjct: 301 GKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 360
Query: 343 NTVKLLVEGLVKKKKIKEA 361
T L+ GL + KI A
Sbjct: 361 VTYTTLISGLDRVGKIDAA 379
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 175/392 (44%), Gaps = 43/392 (10%)
Query: 18 GSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
G T++ + + + + ++ DP +AL ++ + P YA L +LA+ +
Sbjct: 21 GHKTSSRNRNDAPFVNHVKEARDPVEALTLFHEYLQRGFKPDYPSYAALLY--KLARCQD 78
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
F +E ++ ++ QE L + YG+A + A+ F++M R+ S N+
Sbjct: 79 FGAVEEVLRYVEDKNVHCQETIFIALFQHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNS 138
Query: 138 LL-------FACTRSRLYDK--------------VPI--------------LFDEIPKKY 162
LL + + L+DK V I +FDE+ ++
Sbjct: 139 LLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIKGWLEKGEWEQASKVFDEMLER- 197
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL--NCLYKQGNAE 220
+ P ++Y L+ C +G DKA LL +M KG +T+ ++ +CL + N
Sbjct: 198 KVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAITFALLMEGSCLIGEHN-- 255
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA+++ +ME +G V + V +++ G + K ++ EM+ +KPD ++YN L+
Sbjct: 256 EAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILI 315
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +A +V ++ GC NA T+R + C G+F+ KV +
Sbjct: 316 NYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHF 375
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P T + LV GLVK + A V+ ++K+
Sbjct: 376 PRVETFRSLVVGLVKSGNLDGACFVLEEMEKR 407
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 4/195 (2%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+AL L +E +G + +Y +L L + + E + +E K V + + +
Sbjct: 46 EALTLFHEYLQRGFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIF-IAL 104
Query: 246 TNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
YG + EL + M + S N L+ N EA ++++ E G
Sbjct: 105 FQHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGF 164
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
N+ F I G +++A KVF E + P T L+ L + ++ +AKG
Sbjct: 165 RLNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKG 224
Query: 364 VIR-TIKKKFPPNVL 377
++ IKK PN +
Sbjct: 225 LLEDMIKKGKRPNAI 239
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKK 161
LI +YG++G FD A++ F+ M G +++++NA++ AC + + + +V +F+E+ +
Sbjct: 228 LISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRN 287
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD+I+Y LL G + A L NEM ++G++ TY T+L+ + K G +
Sbjct: 288 -GVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDL 346
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + EM K + +V Y+ + + Y G E L +EM+ G+ D +SYN L+
Sbjct: 347 AYEIMLEMPGKKILPNVVTYST-MADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLL 405
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ Y K ++A KV + + +G + T+ + G F++ +VFKE
Sbjct: 406 SIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVF 465
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P+ T L++ K +EA V R K+
Sbjct: 466 PNLLTYSTLIDVYSKGSLYEEAMEVFREFKQ 496
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 158/333 (47%), Gaps = 9/333 (2%)
Query: 49 SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYG 108
+++S+ Y + V +A + KS F + + ES K +I + G
Sbjct: 212 TALSEGYGNTV---FAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACG 268
Query: 109 QAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+ G+ F + F++M G I++N+LL C+R L++ LF+E+ + + D
Sbjct: 269 KGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR-GIDQD 327
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y LL + C G D A E++ EM K + VTY+T+ + K G E+A L++
Sbjct: 328 VFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYN 387
Query: 228 EMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
EM+ G+ LD +YN + + Y G E ++ EM +G+K D ++YN L+ Y K
Sbjct: 388 EMKFLGIGLDRVSYNT-LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQ 446
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+E +V++ ++++ PN T+ T I +++A +VF+E D
Sbjct: 447 GKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLY 506
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L+ L K + A ++ + K+ PNV+
Sbjct: 507 SELINALCKNGLVDSAVLLLDEMTKEGIRPNVV 539
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 79/148 (53%), Gaps = 2/148 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G F+ A++ +M G + V+++NALL + +++V +F E+ KK
Sbjct: 404 LLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM-KKD 462
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y L+ + ++A+E+ E + G++ V Y+ ++N L K G + A
Sbjct: 463 RVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSA 522
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L EM K+G+ +V YN I + +G
Sbjct: 523 VLLLDEMTKEGIRPNVVTYN-SIIDAFG 549
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
Y +AG + A+ +++M LG +S+N LL + ++ + E+ +
Sbjct: 372 GYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS-GVK 430
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
D ++Y LL + G ++ + EM+ V +TY+T+++ K EEA +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ E ++ G+ DV Y+ I G + L+DEM G++P+ ++YN ++ + +
Sbjct: 491 FREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Query: 285 N 285
+
Sbjct: 551 S 551
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ YG+ G F+ R F +M + ++++++ L+ ++ LY++ +F E K+
Sbjct: 439 LLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF-KQA 497
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L D + Y L+ + C +G D A+ LL+EM +G+ VTY ++++ + AE
Sbjct: 498 GLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAE 555
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G E K + + G +++ L++ Y K+ DEA KV+E ++ +G PN T+
Sbjct: 201 GKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTY 260
Query: 311 RTWIYHLCGSGN--FDKAYKVFKESVMVHKIPD 341
+ CG G F + ++F+E + PD
Sbjct: 261 NA-VIDACGKGGVEFKRVVEIFEEMLRNGVQPD 292
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 3/279 (1%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI Q D A + D+M + +N L+ + D + + +
Sbjct: 96 CILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLE 155
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + PD I+Y L+ C + + D+A +L+ +M+ G+ TV Y +LN L KQ E
Sbjct: 156 R-SCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLE 214
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E +L EM + G + D +YN + G E +++++M + PD ++YN LM
Sbjct: 215 EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+CK MDEA+++ E + C+P T+ T I + AY+V ++
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGIS 334
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
PD T L++GL K K++EA ++ ++K P+V+
Sbjct: 335 PDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVV 373
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + + ++M E G S+N ++ S Y++ + +++ +K
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK- 261
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y L+ C D+A LL +M + T +TYTT++ + +A
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R+ +M K G+ D+ YN + G E EL++ M + PD ++Y+ L+
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +D+A+ + E + E GC PN TF T I C +G D+ +KV + V PD
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI 365
T L++G K ++++A ++
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAIL 465
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 157/341 (46%), Gaps = 12/341 (3%)
Query: 43 KALDIYSSVSKHYASPV---SSRYAQDLT-VRRLAKSKRFSDIETLIESHKNDPKITQEP 98
+ L+ YS + ++ P +S Y +T R SK +I + + + P +
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
++++Y Q G D A+ F ++ + ++ L+ + + D+ L DE+
Sbjct: 64 ---TILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEM 118
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+K + PD Y L+ C G D A +L M + +TYT+++ +
Sbjct: 119 IQK-DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
+EA +L +M++ G+ D AYN + + E + +L++EM +AG +PDT SYN
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C C++ +EA K+ E + E C P+ T+ + + C D+A ++ ++ V
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
P T L+ G + ++ +A V+ + K P+++
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLV 338
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 115/233 (49%), Gaps = 14/233 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + +AG D + + M E+ V++++ L+ C +R+ D IL
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------- 465
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPDK SY +L+ C +G ++A E+++ M +G T+ Y ++ L +E
Sbjct: 466 -GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
A ++ M ++G + ++ Y++ I +R+++ I D M + G PD +Y L
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLC--KTKRVEDAINVLDVMLEKGCVPDVATYTSL 582
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+ +CK MD A + ++ + ++GC P+ + I C SGN +KA +V +
Sbjct: 583 IDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 37/300 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + +A A R + M + G ++++N LL C +L + +L E+ +
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL--EVMVE 365
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +PD ++Y +L+ C G D A LL M +G + VT+ T+++ K G +E
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425
Query: 222 AERLWSEMEKKGVDLDVAAYNV---------RITNTYG---------------------G 251
++ M++ DV Y+ R+ + + G
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTG 485
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E +E++D M G P + Y ++ C E DEA K+ + + E GC PN T+
Sbjct: 486 KVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYS 545
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
I LC + + A V VM+ K +PD T L++G K K+ A +T++
Sbjct: 546 ILINGLCKTKRVEDAINVL--DVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + +AG+ A+R D+M G V+++N LL C RL D +L +E+ ++
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL-NEM-RE 394
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++ L+ +C G DKAL+L + M N+ + VTY T+++ + +QG+ ++
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A LW +M + + + Y++ I ++ G E +DEM + G+ P+ ++YN ++
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 514
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK-- 338
YC++ + + +K + + N SP+ T+ T I+ G DK + FK M+ K
Sbjct: 515 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH---GYIKEDKMHDAFKLLNMMEKEK 571
Query: 339 -IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +L+ G ++EA + + K
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 146/317 (46%), Gaps = 4/317 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ V K+ F ++ +I + ++ + +AG + AM D
Sbjct: 157 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 216
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++++N++L RS ++DK +F E+ + ++PD S+ +L+ C G
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM-DDFGVAPDVRSFTILIGGFCRVG 275
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
++AL++ EM ++G++ V+++ ++ ++G + A EM G+ D Y
Sbjct: 276 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 335
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I G + DEM G PD ++YN L+ CK + +A+ + + E
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ TF T I+ C G DKA ++F + PD T L++G+ ++ + +A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455
Query: 362 KGVIRTIKKK--FPPNV 376
+ + + FP +V
Sbjct: 456 NDLWDDMHSREIFPNHV 472
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 40/313 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G + A++ + +M G ++SF+ L+ R D E+ + +
Sbjct: 267 LIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-RCF 325
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD + Y +++ C +G AL + +EM G VTY T+LN L K+ +A
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L +EM ++GV D+ + I G ++ +L D M + L+PD ++YN L+
Sbjct: 386 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 445
Query: 282 YCKNEMMDEAKKVYEGLEEN-----------------------------------GCSPN 306
C+ +D+A +++ + G PN
Sbjct: 446 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 505
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVI 365
T+ + I C SGN K K F + +MV+K+ PD T L+ G +K+ K+ +A ++
Sbjct: 506 IMTYNSIIKGYCRSGNVSKGQK-FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564
Query: 366 RTI-KKKFPPNVL 377
+ K+K P+V+
Sbjct: 565 NMMEKEKVQPDVV 577
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 8/274 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGT 128
L K +R D E L+ + P LC LI Y G D A++ FD M
Sbjct: 376 LCKERRLLDAEGLLNEMRER---GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++++N L+ R DK L+D++ + + P+ ++Y +L+ SHC+ G + A
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAF 491
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
L+EM NKG+ +TY +++ + GN + ++ +M V D+ YN I
Sbjct: 492 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 551
Query: 249 YGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
D +L++ M ++PD ++YN L+ + + + EA ++E + G P+
Sbjct: 552 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 611
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
T+ + I +GN +A+++ E + PD
Sbjct: 612 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 36/173 (20%)
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKE 258
EV T T +++ K ++ + + SEMEK+ V DV +NV + + GD E
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L+D M GLKP + T+ + + LC
Sbjct: 213 LVDSMVSKGLKPGIV-----------------------------------TYNSVLKGLC 237
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
SG +DKA++VFKE PD + +L+ G + +I+EA + + ++ +
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR 290
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 164/367 (44%), Gaps = 45/367 (12%)
Query: 45 LDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE---TLIESHKNDPKITQEPYLC 101
++I +S+ Y++ S+ DL +R ++++ + TL+ S I C
Sbjct: 138 VEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDA----C 193
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI S + G + A R + ++ G +V + N ++ A + +KV E+ +
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + PD ++Y L+ ++ G ++A EL++ M +KG TY TV+N L K G E
Sbjct: 254 K-GVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYE 312
Query: 221 EAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDEMR--------------- 264
A+ +++EM + G+ D Y ++ + GD + + +MR
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM 372
Query: 265 --------------------DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+AGL PD + Y L+ YC+ M+ EA + + + GC+
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCA 432
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ T+ T ++ LC +A K+F E PD T+ +L++G K ++ A +
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492
Query: 365 IRTIKKK 371
+ +K+K
Sbjct: 493 FKKMKEK 499
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 135/272 (49%), Gaps = 4/272 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y + GM AM ++M + G V+++N +L + ++ + LF+E+ ++
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER- 464
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD + +L+ HC G+ A+EL +M+ K +++ VTY T+L+ K G+ + A
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA 524
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +W++M K + ++++ + G + DEM +KP + N ++
Sbjct: 525 KEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG 584
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK--ESVMVHKI 339
YC++ + + E + G P+ ++ T IY N KA+ + K E +
Sbjct: 585 YCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLV 644
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T ++ G ++ ++KEA+ V+R + ++
Sbjct: 645 PDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 6/301 (1%)
Query: 64 AQDLTVRRLAKS--KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
AQ +R + +S R + +L+ ++ N + + LIR++ QA A F
Sbjct: 122 AQSCVLRMIRRSGVSRVEIVNSLVSTYSNCG--SNDSVFDLLIRTFVQARKLREAYEAFT 179
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+ G S+ + NAL+ + R + ++ EI + + + + +++ + C
Sbjct: 180 LLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRS-GVGVNVYTLNIMVNALCKD 238
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G +K L+E++ KGV VTY T+++ QG EEA L M KG V Y
Sbjct: 239 GKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTY 298
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N I G ER KE+ EM +GL PD+ +Y L+ CK E + ++ +
Sbjct: 299 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRS 358
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
P+ F + + SGN DKA F IPD +L++G +K I E
Sbjct: 359 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE 418
Query: 361 A 361
A
Sbjct: 419 A 419
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F M ++ F++++ TRS DK + F+ + K+ L PD + Y +L++ +C
Sbjct: 353 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTILIQGYC 411
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG------ 233
G +A+ L NEM +G + VTY T+L+ L K+ EA++L++EM ++G
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSY 471
Query: 234 -----------------------------VDLDVAAYNVRITNTYG--GDPERLKELIDE 262
+ LDV YN + + +G GD + KE+ +
Sbjct: 472 TLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNT-LLDGFGKVGDIDTAKEIWAD 530
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M + P IS++ L+ C + EA +V++ + P + I C SGN
Sbjct: 531 MVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGN 590
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++ + +PD + L+ G VK++ + +A G+++ +++K
Sbjct: 591 ASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEK 639
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 106/223 (47%), Gaps = 1/223 (0%)
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+V I+ + N + + LL+++ + +A E + +KG V+ +
Sbjct: 137 RVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNAL 196
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
+ L + G E A R++ E+ + GV ++V N+ + G E++ + E+++ G+
Sbjct: 197 IGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGV 256
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PD ++YN L++ Y +M+EA ++ + G SP T+ T I LC G +++A +
Sbjct: 257 YPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKE 316
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
VF E + PD T + L+ KK E + + ++ +
Sbjct: 317 VFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSR 359
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 145/314 (46%), Gaps = 15/314 (4%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS--KRFSDI 81
S+I K KL +E A D+YS + P Y + LA FS +
Sbjct: 154 SAIIDGLCKDKLVNE-----AYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLL 208
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
+I + N P + L + + G+ +A + F M ++G +V S+N ++
Sbjct: 209 HEMILKNIN-PDVYTFSILIDALCKEGK-----NAKQIFHAMVQMGVNPNVYSYNIMING 262
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+ + D+ L E+ K N+ PD ++Y L+ C SG AL L+NEM ++G
Sbjct: 263 LCKCKRVDEAMNLLREMLHK-NMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPA 321
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELI 260
VTYT++L+ L K N ++A L+ +M+++G+ + Y I GG + +EL
Sbjct: 322 DVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELF 381
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+ G D +Y +++ CK M DEA + +E+NGC PNA TF I L
Sbjct: 382 QHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK 441
Query: 321 GNFDKAYKVFKESV 334
DKA K+ E +
Sbjct: 442 DENDKAEKLLHEMI 455
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 6/255 (2%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
+ + A + +MD +VI++N L+ A C +L +L + I K N++PD +
Sbjct: 165 LVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK--NINPDVYT 222
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ +L+ + C G + K ++ + M GV +Y ++N L K +EA L EM
Sbjct: 223 FSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREML 280
Query: 231 KKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
K + D YN I G L++EM G D ++Y L+ CKN+ +D
Sbjct: 281 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 340
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A ++ ++E G P T+ I LC G A ++F+ ++ D T +++
Sbjct: 341 KATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMI 400
Query: 350 EGLVKKKKIKEAKGV 364
GL K+ EA +
Sbjct: 401 SGLCKEGMFDEALAI 415
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 4/273 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + ++ +LG + I++ L+ K+ D++ +
Sbjct: 51 LINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQ- 109
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+++SYG LL C +G + A++LL +E++ V Y+ +++ L K EA
Sbjct: 110 AFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEA 169
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+SEM+ + + +V YN I G L+ EM + PD +++ L+
Sbjct: 170 YDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDA 229
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK AK+++ + + G +PN ++ I LC D+A + +E + + +PD
Sbjct: 230 LCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPD 287
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
T L++GL K +I A ++ + + P
Sbjct: 288 TVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP 320
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+I FN +L + + + Y V L ++ K + + ++ +L+ C G + LL
Sbjct: 10 IIEFNKILGSLVKLKYYLTVISLSKQMDVK-GIEQNLVTLSILINCFCHLGQMAFSFSLL 68
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
++ G T+T+TT++ L +G ++ ++ + + +Y +
Sbjct: 69 GKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKT 128
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ +L+ + D +P+ + Y+ ++ CK+++++EA +Y ++ PN T+
Sbjct: 129 GETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITY 188
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IK 369
T I C +G A+ + E ++ + PD T +L++ L K+ K AK + ++
Sbjct: 189 NTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQ 246
Query: 370 KKFPPNV---------LRAWKKVEEELGLV 390
PNV L K+V+E + L+
Sbjct: 247 MGVNPNVYSYNIMINGLCKCKRVDEAMNLL 276
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
A I+ ++ + +P + Y+ ++ + L K KR + L+ + + +L
Sbjct: 237 AKQIFHAMVQMGVNP--NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I ++G A+ ++M G P V+++ +LL A +++ DK LF ++ K+
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERG 353
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P +Y L+ C G A EL + KG + TYT +++ L K+G +EA
Sbjct: 354 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 413
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
+ S+ME G + + + I + + D ++ ++L+ EM GL
Sbjct: 414 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 159/337 (47%), Gaps = 7/337 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +IY V + + + Y ++ + L K+++ + ++ + +
Sbjct: 236 DLAWEIYQEVVR--SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYN 293
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI +Y + G+ + A D M G V ++NA++ ++ Y + + DE+ K
Sbjct: 294 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK- 352
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD +Y +LL C + + A + +EM ++GV V+++ ++ L K G ++
Sbjct: 353 IGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQ 412
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + + +M+ G+ D Y + I G E LK + DEM + G D ++YN ++
Sbjct: 413 ALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK-VRDEMLEQGCVLDVVTYNTIL 471
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +M+ EA +++ + E G P+ TF T I GN +KA +F+ + +
Sbjct: 472 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 531
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
PD T L++G K ++++ + I ++ PN
Sbjct: 532 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G + A+ F+ M + V+++N L+ + +KV L++++ +
Sbjct: 505 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR- 563
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ISYG+L+ +C+ G +A L +EM KG E T +T T++ + GNA +A
Sbjct: 564 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 623
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ S M KG+ D YN I + +R L+++M ++GL PD I+YN ++
Sbjct: 624 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 683
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + M EA+ + + E G +P+ +T+ + I N +A++V E + +PD
Sbjct: 684 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 38/370 (10%)
Query: 45 LDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLI 104
++I S+ Y + S+ DL VR ++++ + K+ +L+
Sbjct: 167 VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLL 226
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
+ G D A + ++ G +V + N ++ A +++ + ++ +K +
Sbjct: 227 GGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GV 285
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
PD ++Y L+ ++C G ++A EL++ M KG++ TY ++N L K G A+
Sbjct: 286 FPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKG 345
Query: 225 LWSEMEKKGVDLDVAAYNVRIT----NTYGGDPERL----------KELID--------- 261
+ EM K G+ D A YN+ + N D ER+ +L+
Sbjct: 346 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 405
Query: 262 -------------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+M++AGL PD + Y L+ +C+N +M EA KV + + E GC +
Sbjct: 406 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 465
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-T 367
T+ T + LC +A ++F E PDF T L+ G K + +A +
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525
Query: 368 IKKKFPPNVL 377
I++ P+V+
Sbjct: 526 IQRNLKPDVV 535
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R FD+M G ++SF+AL+ +++ D+ F ++ K L+PD + Y +L+
Sbjct: 378 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILI 436
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV- 234
C +G +AL++ +EM +G + VTY T+LN L K+ EA+ L++EM ++GV
Sbjct: 437 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496
Query: 235 -DL---------------------------------DVAAYNVRITN-TYGGDPERLKEL 259
D DV YN I G + E++ EL
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
++M + P+ ISY L+ YC + EA ++++ + E G T T + C
Sbjct: 557 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+GN KA + ++ +PD T L+ G +K++ + A ++ ++ P+V+
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 675
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 5/267 (1%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
M A F +M E G +F L+ ++ +K LF+ + ++ NL PD ++Y
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTY 537
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C +K EL N+M ++ + ++Y ++N G EA RLW EM +
Sbjct: 538 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597
Query: 232 KGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG + + N I Y G+ + E + M G+ PD I+YN L+ + K E MD
Sbjct: 598 KGFEATIITCNT-IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 656
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
A + +E +G P+ T+ + G +A + + + PD +T L+
Sbjct: 657 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Query: 350 EGLVKKKKIKEAKGVI-RTIKKKFPPN 375
G V + +KEA V +++ F P+
Sbjct: 717 NGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 113 FDHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
F H++++F M L R + A++ R +V I+ + N + + +
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
LL++++ + + E +++KG+ V+ ++L L K G + A ++ E+ +
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 247
Query: 232 KGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
GV ++V N+ I E K + +M + G+ PD ++YN L+ YC+ +++E
Sbjct: 248 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 307
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++ + + G P T+ I LC +G + +A V E + + PD T +L+
Sbjct: 308 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLV 367
Query: 351 GLVKKKKIKEAKGVI 365
+ + +A+ +
Sbjct: 368 ECCRNDNMMDAERIF 382
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 13/297 (4%)
Query: 36 RSEFDPDKALDIYSSVSKH--YASPVSS-RYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
R F KAL + + H YA SS +A D+ + + + + L+ +
Sbjct: 87 RLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDIA----GRMRDYKTVWALVARMRARR 142
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKV 151
+ + AG D A++ F M E G P+ + SFN +L C R+
Sbjct: 143 IGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAY 202
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
LF + K+ D +SY ++ C + KALE+L EM +G+ T TY +L
Sbjct: 203 NNLFKVLRGKFK--ADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLK 260
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLK 269
++ G +EA + +M+++ V++DV Y + + +G G+ +R +++ +EM G+
Sbjct: 261 GYFRAGQLKEAWEFFLQMKEREVEIDVVTYTT-MVHGFGVVGEIKRARKVFNEMVGEGIL 319
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
P T +YN ++ CK + ++ A ++E + + G PN TT+ I L +GN DKA
Sbjct: 320 PSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKA 376
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 7/250 (2%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
S SF+ + R R Y V L + + + P ++ ++ + +G D+A+++
Sbjct: 111 SASSFDHAIDIAGRMRDYKTVWALVARM-RARRIGPSSKTFAIIAERFVAAGKPDRAIKV 169
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
M G ++ T+L+ L K E A ++ + DV +YN+ I N +
Sbjct: 170 FLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNI-IANGWC 228
Query: 250 --GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
P+ L E++ EM + GL P +YN L+ Y + + EA + + ++E +
Sbjct: 229 LIKRTPKAL-EVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDV 287
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-R 366
T+ T ++ G +A KVF E V +P T +++ L KK ++ A +
Sbjct: 288 VTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEE 347
Query: 367 TIKKKFPPNV 376
+KK + PN+
Sbjct: 348 MVKKGYVPNL 357
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 6/242 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++ Y +AG A F QM E V+++ ++ + +F+E+ +
Sbjct: 258 LLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGE- 316
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +Y +++ C S + A+ + EM KG TY V+ L+ GN ++A
Sbjct: 317 GILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKA 376
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
M+ G + +V YNV I GD E+ + ++M L P+ +YN L++
Sbjct: 377 MEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSL-PNLDTYNVLISA 435
Query: 282 YC---KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
K+E + A K+ + + G P TF + L +GN A ++ + +
Sbjct: 436 MFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGR 495
Query: 339 IP 340
+P
Sbjct: 496 LP 497
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 170/375 (45%), Gaps = 8/375 (2%)
Query: 5 RHIRRLCTATTAAGSSTTASSISVSKAK-SKLRSEFDPDKALDIYSSVSKHYASPVSSRY 63
R +R C A S SI+ + L D A +IY V + + + Y
Sbjct: 41 RKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR--SGVQVNVY 98
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
++ + L K+++ + ++ + + LI +Y + G+ + A D M
Sbjct: 99 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 158
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
G V ++NA++ ++ Y + + DE+ K +SPD +Y +LL C + +
Sbjct: 159 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK-IGMSPDTATYNILLVECCRNDN 217
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
A + +EM ++GV V+++ ++ L K G ++A + + +M+ G+ D Y +
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277
Query: 244 RITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I G E LK + DEM + G D ++YN ++ CK +M+ EA +++ + E
Sbjct: 278 LIGGFCRNGVMSEALK-VRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER 336
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G P+ TF T I GN +KA +F+ + + PD T L++G K ++++
Sbjct: 337 GVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKV 396
Query: 362 KGVIR-TIKKKFPPN 375
+ I ++ PN
Sbjct: 397 NELWNDMISRRIYPN 411
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 123/240 (51%), Gaps = 2/240 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G + A+ F+ M + V+++N L+ + +KV L++++ +
Sbjct: 348 LINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISR- 406
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ISYG+L+ +C+ G +A L +EM KG E T +T T++ + GNA +A
Sbjct: 407 RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 466
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ S M KG+ D YN I + +R L+++M ++GL PD I+YN ++
Sbjct: 467 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 526
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + M EA+ + + E G +P+ +T+ + I N +A++V E + +PD
Sbjct: 527 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 160/370 (43%), Gaps = 38/370 (10%)
Query: 45 LDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLI 104
++I S+ Y + S+ DL VR ++++ + K+ +L+
Sbjct: 10 VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLL 69
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
+ G D A + ++ G +V + N ++ A +++ + ++ +K +
Sbjct: 70 GGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK-GV 128
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
PD ++Y L+ ++C G ++A EL++ M KG++ TY ++N L K G A+
Sbjct: 129 FPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKG 188
Query: 225 LWSEMEKKGVDLDVAAYNVRIT----NTYGGDPERLKE----------------LID--- 261
+ EM K G+ D A YN+ + N D ER+ + LI
Sbjct: 189 VLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLS 248
Query: 262 -------------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+M++AGL PD + Y L+ +C+N +M EA KV + + E GC +
Sbjct: 249 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 308
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-T 367
T+ T + LC +A ++F E PDF T L+ G K + +A +
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368
Query: 368 IKKKFPPNVL 377
I++ P+V+
Sbjct: 369 IQRNLKPDVV 378
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 138/299 (46%), Gaps = 38/299 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R FD+M G ++SF+AL+ +++ D+ F ++ K L+PD + Y +L+
Sbjct: 221 AERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILI 279
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV- 234
C +G +AL++ +EM +G + VTY T+LN L K+ EA+ L++EM ++GV
Sbjct: 280 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339
Query: 235 -DL---------------------------------DVAAYNVRITN-TYGGDPERLKEL 259
D DV YN I G + E++ EL
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
++M + P+ ISY L+ YC + EA ++++ + E G T T + C
Sbjct: 400 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 459
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+GN KA + ++ +PD T L+ G +K++ + A ++ ++ P+V+
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 518
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 5/267 (1%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
M A F +M E G +F L+ ++ +K LF+ + ++ NL PD ++Y
Sbjct: 322 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTY 380
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C +K EL N+M ++ + ++Y ++N G EA RLW EM +
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 440
Query: 232 KGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG + + N I Y G+ + E + M G+ PD I+YN L+ + K E MD
Sbjct: 441 KGFEATIITCNT-IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 499
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
A + +E +G P+ T+ + G +A + + + PD +T L+
Sbjct: 500 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Query: 350 EGLVKKKKIKEAKGVI-RTIKKKFPPN 375
G V + +KEA V +++ F P+
Sbjct: 560 NGHVTQNNLKEAFRVHDEMLQRGFVPD 586
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 133/272 (48%), Gaps = 5/272 (1%)
Query: 93 KITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
+I Y NL I + + G D A F++M +G +V S+N L+ C + L
Sbjct: 233 RIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSA 292
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
+ + + +K + PD +++ L+ C G +A +L EM+ + TTVTY ++
Sbjct: 293 MKL--RSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILI 350
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
N K GN E RL+ EM + V D+ YN I G ++ L+ E+ + GL
Sbjct: 351 NGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLV 410
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +++ L+ C + + A ++Y+ + ++ +P TFR + C + ++D A ++
Sbjct: 411 PNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQL 470
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+E + HK PD N + L GL + K+K A
Sbjct: 471 LEEMLNRHKAPDVNNLYELCAGLGQCGKVKTA 502
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 5/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L +++ F +A TF +M + G +V S NA L + D + E+ ++
Sbjct: 174 LFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREM-RRS 232
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ + L++ + C G DKA + EM G +Y T++ +G A
Sbjct: 233 RIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSA 292
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L S MEK GV DV +N + N + G + +L EM+ L P T++YN L+
Sbjct: 293 MKLRSVMEKNGVPPDVVTFNT-LVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILIN 351
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K + +++E + + T+ I LC G KA + +E +P
Sbjct: 352 GYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVP 411
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPP 374
+ +T L+ G +K+ + A + ++ IK F P
Sbjct: 412 NASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTP 446
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 20/221 (9%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
F +LL++ RL D P +FD LL K+ A + M
Sbjct: 154 FESLLYS---YRLCDSSPHVFD----------------LLFKTFAHLKKFRNASDTFCRM 194
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDP 253
++ G T + L+ L + A + EM + + + N+ I G
Sbjct: 195 KDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRL 254
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
++ + +EM G P+ SYN L+ YC ++ A K+ +E+NG P+ TF T
Sbjct: 255 DKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTL 314
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ C G +A K+F E + P T +L+ G K
Sbjct: 315 VNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSK 355
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 153/314 (48%), Gaps = 5/314 (1%)
Query: 67 LTVRRLAKSKRFSDIETLIESHK-NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ ++ L + R SD + + K +D K + Y+ L+ G +G + ++ M
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYI-TLLDKCGDSGDSQSVVEVWNAMVA 339
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G +++S+ A++ A + D+ +FDE+ +K +SP++ SY L+ + D
Sbjct: 340 DGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEK-GMSPEQYSYNSLISGFLKADMFD 398
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+ALEL N M G T+ +N K G + +A + + M+ KG+ DVAA N +
Sbjct: 399 RALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVL 458
Query: 246 TNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ G G K + E++ G+ PDTI+Y ++ C K DEA + + E+GC
Sbjct: 459 YSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCV 518
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ + I L G ++A+++F + + P T L+ GL ++ K+KE +
Sbjct: 519 PDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQL 578
Query: 365 IRTIKKK-FPPNVL 377
+ + + +PPN++
Sbjct: 579 LEEMTRTIYPPNLI 592
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 164/333 (49%), Gaps = 14/333 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL ++ + + SP +Y+ + + K+ F L +H N + Y
Sbjct: 363 DEALAVFDEMKEKGMSP--EQYSYNSLISGFLKADMFDRALELF-NHMNACGPSPNGYTH 419
Query: 102 NL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
L I YG++G A++ ++ M G V + NA+L++ S +F E+ K
Sbjct: 420 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYEL-K 478
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SPD I+Y +++K + +D+A+ ++M G + ++++ LYK G
Sbjct: 479 AMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGN 538
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA +L+ ++++ ++ YN ++ G + + +L++EM P+ I+YN ++
Sbjct: 539 EAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVL 598
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C KN ++ A + + E GC+P+ +++ T +Y L ++A+++F + + KI
Sbjct: 599 DCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQ---MKKI 655
Query: 340 --PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD+ T+ ++ VK +KEA + T+K+
Sbjct: 656 LAPDYATLCTILPSFVKNGLMKEA---LHTVKE 685
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 130/280 (46%), Gaps = 3/280 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+LC LIR + A + F++ LG S+N+L+ L D LF E+
Sbjct: 733 FLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEM 792
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ PD+ +Y L+L + S ++ L++ EM KG E T VTY T+++ L K
Sbjct: 793 -KRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKR 851
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E+A L+ + +G Y + G + L +EM + G +P+ YN
Sbjct: 852 LEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNI 911
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + + +++E + E G +P+ ++ I LC +G + F++ +
Sbjct: 912 LLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELG 971
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD LL++GL K ++I+EA + +KKK PN+
Sbjct: 972 LEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNL 1011
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 37/303 (12%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
Q G D A+ FD+M E G S+N+L+ ++ ++D+ LF+ + SP+
Sbjct: 358 QVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM-NACGPSPNG 416
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKG------------------------------ 198
++ L + + SG S KA++ M++KG
Sbjct: 417 YTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYE 476
Query: 199 -----VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGD 252
V T+TYT ++ C K A+EA +S+M + G DV A N I Y GG
Sbjct: 477 LKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGK 536
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+L ++++ ++P +YN L++ + + E ++ E + PN T+ T
Sbjct: 537 GNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNT 596
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
+ L +G + A + PD ++ ++ GL+K+++++EA + +KK
Sbjct: 597 VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKIL 656
Query: 373 PPN 375
P+
Sbjct: 657 APD 659
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 4/251 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
++ + G++ + ++ +M G + +++N ++ +S RL + + ++ + +
Sbjct: 807 ILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 866
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ SP +YG LL SG A L NEM G E Y +LN GN E
Sbjct: 867 F--SPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTEN 924
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L+ +M ++G++ D+ +Y + I T G ++ + GL+PD I YN L+
Sbjct: 925 VCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLID 984
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K+E ++EA ++ +++ G PN T+ + I HL +G +A ++++E + P
Sbjct: 985 GLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKP 1044
Query: 341 DFNTVKLLVEG 351
T L+ G
Sbjct: 1045 SVFTYNALIRG 1055
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 10/256 (3%)
Query: 60 SSRYAQDLTVRRLAKSKRFS---DIETLIESHKNDPK-ITQEPYLCNLIRSYGQAGMFDH 115
S+ + + L KSKR D+ + S P T P L L++S G
Sbjct: 834 STYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKS----GKMVD 889
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F++M E G + +N LL + + V LF+++ ++ ++PD SY +L+
Sbjct: 890 AENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQ-GINPDIKSYTILI 948
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C +G + L ++ G+E + Y +++ L K EEA L++EM+KKG+
Sbjct: 949 DTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGII 1008
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++ YN I + G ++ +E+ G KP +YN L+ Y + D A
Sbjct: 1009 PNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAA 1068
Query: 295 YEGLEENGCSPNATTF 310
Y + GC PN++T+
Sbjct: 1069 YGQMIVGGCQPNSSTY 1084
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 137/332 (41%), Gaps = 38/332 (11%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
LRS DP +AL+++++ ++ + V + + + + + R D+ + + +
Sbjct: 75 LRSAPDPAEALELFTAAARQ-PTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQVVK 133
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T + G G A M E G + ++N L++ +S + +
Sbjct: 134 TNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEV 193
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ + + +SP +Y +L+ + D L LLNEME +GV+ +YT + L
Sbjct: 194 YKAMVED-GISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLG 252
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNV---------RITN------------------ 247
+ +EA + +ME G DV + V R+++
Sbjct: 253 QAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRV 312
Query: 248 TY---------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
TY GD + + E+ + M G + +SY ++ C+ +DEA V++ +
Sbjct: 313 TYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEM 372
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+E G SP ++ + I + FD+A ++F
Sbjct: 373 KEKGMSPEQYSYNSLISGFLKADMFDRALELF 404
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-- 251
M G+ + TY ++ L K G EA ++ M + G+ V Y+V + +G
Sbjct: 162 MREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMV-AFGKKR 220
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
D + + L++EM G+KP+ SY + + DEA + +E++GC P+ T
Sbjct: 221 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHT 280
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
I LC +G A VF + + PD
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPD 310
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G++ + A+ F++M + G ++ ++N+L+ ++ + +++E+ +K
Sbjct: 982 LIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRK- 1040
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
P +Y L++ + SGS+D A +M G + + TY + N L
Sbjct: 1041 GWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 146/308 (47%), Gaps = 3/308 (0%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDH 115
+S V +R + + L K++ D + E + LI + +A D
Sbjct: 427 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 486
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + D M G + +++ +++ + + ++ + ++ ++ P + LL
Sbjct: 487 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER-GCEPGLFIFTSLL 545
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ G +++A ++L EM +G + YT++++ L+ G EA ++ M +KG
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 605
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D Y I N + G+ E E+++ M +G+ PD +YN LM Y K E +D+A V
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLV 353
Y+ + +G PNA TF ++ L G D+A+ +FKE + ++ P + +L++GL
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLG 725
Query: 354 KKKKIKEA 361
K ++ EA
Sbjct: 726 KAGRVSEA 733
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 33/326 (10%)
Query: 71 RLAKSKRFSD---IETLIESHKNDPKITQ-------------EPYL---CNLIRSYGQAG 111
R+ KS D TLIE+ N K+ + EPYL +LI + +AG
Sbjct: 184 RMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAG 243
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
D A + + S +++N+L+ C R+ D + +L + + + PD +
Sbjct: 244 KVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMV--ECDNFPDIQT 301
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ + D ALEL + + G + TYTT++ LY EEA+ + E
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA- 360
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
LDV +Y I D +R+ E L ++++ AG P+ ++Y ++ K
Sbjct: 361 -----LDVISYTTVIKGL--ADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+++ K +E + + C P TT+ I LC + A KVF++ V +PD T
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 473
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFP 373
L++G K K+ EA+ ++ + K P
Sbjct: 474 LIDGFSKASKMDEARKLLDVMLTKGP 499
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 142/312 (45%), Gaps = 3/312 (0%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ LA SKR + L E K +I +AG + ++ F+ M
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++ ++ ++++ +F+++ +K PD I+Y L+ + D+A
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK-GCVPDTITYTTLIDGFSKASKMDEA 487
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+LL+ M KG E T VTY ++++ K EA+ + ++M ++G + + + ++
Sbjct: 488 RKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSY 547
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E +++ EM G PD I Y L+ + EA+ V++ + E GC+P+
Sbjct: 548 YLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPD 607
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI- 365
A T+ T I + GN + A ++ + PD L++G VK +++ +A GV
Sbjct: 608 ALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYD 667
Query: 366 RTIKKKFPPNVL 377
R + PN +
Sbjct: 668 RMVASGIKPNAV 679
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 3/260 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A+ +M G V++ N +L ++R DK LF E+P P +SY
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPS-MGCEPTIVSYN 59
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
++ D+A + N M + G E + +TT+++ K G + L ++ K+
Sbjct: 60 TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR 119
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
DV Y I GD + ++++EM AG PD +Y L+ CK +DEA
Sbjct: 120 -FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+++E + ++GC + TF T I L G D+A ++++E + P L+
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
L K K+ EA + +T+ K
Sbjct: 239 LCKAGKVDEANEIYQTVVAK 258
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 18/323 (5%)
Query: 71 RLAKSKRFSDIET---LIESHKNDPKITQEPYLCNLIRSYG-----------QAGMFDHA 116
++ + F DI+T L+ ++ L L+ SYG G++D A
Sbjct: 289 QMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYD-A 347
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
R + VIS+ ++ S+ D+ LF+++ K SP+ ++Y ++
Sbjct: 348 QRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKL-KTAGCSPNVVAYTAVID 406
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
+G + L+ +M T TYT V++ L K +A +++ +M +KG
Sbjct: 407 GLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 466
Query: 237 DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
D Y I + + ++L+D M G +P ++Y ++ +CK +M++EAK+V
Sbjct: 467 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 526
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+ E GC P F + + + G ++AY+V E PD L++ L
Sbjct: 527 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586
Query: 356 KKIKEAKGVIRT-IKKKFPPNVL 377
++ EA+ V + I+K P+ L
Sbjct: 587 GRVPEARHVFDSMIEKGCAPDAL 609
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 144/304 (47%), Gaps = 18/304 (5%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++I Y +AG D + ++M G P + F + C R+ D+ LF+ + K
Sbjct: 129 SVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV-DEAYELFERMRK 187
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L D +++ L+++ + G D+A EL EM +G E +++ L K G +
Sbjct: 188 SGCLG-DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYNF 277
EA ++ + K V AYN + + Y G + LK L+ +M + PD +YN
Sbjct: 247 EANEIYQTVVAKKVATSRVAYN-SLMDGYCKLGRVDDGLKLLL-QMVECDNFPDIQTYNI 304
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + + +D+A ++++ L GC PNA T+ T I L + ++A F E++
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL--- 361
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELGLVPAPAVG 396
D + +++GL K+I EA + +K PNV+ A+ V + GL+ A +
Sbjct: 362 ---DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVV-AYTAVID--GLLKAGRIE 415
Query: 397 DGQK 400
DG K
Sbjct: 416 DGLK 419
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+++ + G + A + M + G ++N+L+ + D+ ++D +
Sbjct: 613 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 672
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ +++ +L+ G +D+A L EM E V T V+YT +++ L K G
Sbjct: 673 -GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVS 731
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA + EM +G+ + Y I + G PE K+L+++M G+ PD +Y+ L
Sbjct: 732 EAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA-KKLVEDMVKLGVNPDVQAYSAL 790
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+T + M+D A V++ + + GC+PN T++
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ Y G + A + +M G VI + +L+ + + +FD + +K
Sbjct: 543 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD ++YG ++++ G+ + A E+L M GV Y ++++ K ++
Sbjct: 603 -GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 661
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAG-LKPDTISYNFLM 279
A ++ M G+ + +NV + + G +R L EM + + P +SY L+
Sbjct: 662 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K + EA ++ + + G P T+ + IY L +G +A K+ ++ V +
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
PD L+ GL+ + A V + +K+ PN
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 818
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 10/265 (3%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P + L +L+ S G+ A FD M E G +++ ++ ++ +
Sbjct: 571 PDVILYTSLIDLLFSTGRV---PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ E+ K + PD +Y L+ + D+A + + M G++ VT+ +++
Sbjct: 628 GEIL-ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMH 686
Query: 212 CLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAG 267
L+K G + A L+ EM EK V + +Y + I G R+ E EM D G
Sbjct: 687 GLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL--GKAGRVSEAFSQFQEMIDRG 744
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
+ P+ +Y L+ K + EAKK+ E + + G +P+ + I L S D A+
Sbjct: 745 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 804
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGL 352
VF+E + P+ T K+L G
Sbjct: 805 DVFQEMMKRGCAPNEVTYKVLRRGF 829
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%)
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
E + + EM GL PD ++ N ++ CK +D+A +++ + GC P ++ T
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
I L D+AYK F + PD L+ G K + + ++ K+F
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121
Query: 374 PNVL 377
P+V
Sbjct: 122 PDVF 125
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+ FS + ++E + P + L I G+AG A F +M + G ++
Sbjct: 696 RAFSLFKEMLEKDEVPPTLVSYTIL---IDGLGKAGRVSEAFSQFQEMIDRGIIPECHTY 752
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
+L+++ ++ + L +++ K ++PD +Y L+ DS D A ++ EM
Sbjct: 753 TSLIYSLAKAGRIPEAKKLVEDMVK-LGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 811
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+G VTY + G A + E
Sbjct: 812 KRGCAPNEVTYKVLRRGFRAAGRALDLE 839
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ S + + + + QMD G P + + N L+ + C +RL +L D +
Sbjct: 16 LLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLG 75
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P ++ L++ C G +AL+L ++M +G + +TY T++N L K E
Sbjct: 76 YQ--PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTE 133
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+S+M KG+ + Y+ I G + L M + PD +++N L+
Sbjct: 134 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 193
Query: 281 CYCKNEM---MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
CK M MD+A ++E + + G P+ T+ T I+ LC G A +F E V+
Sbjct: 194 ALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 253
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+IPD T ++L + L K ++ EA +++ I+
Sbjct: 254 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 285
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G A++ FD+M G V+++ L+ + R + LF ++ K
Sbjct: 86 LIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE-- 220
+SP+ +Y L+ C G +A+ L M ++ + +T+ T+++ L K+G +
Sbjct: 145 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIM 204
Query: 221 -EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A L+ EM ++G+ D YN I + G L EM G PD ++Y L
Sbjct: 205 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 264
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
CKN + EA + + +E P+ + + +C +G + A +F +
Sbjct: 265 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 324
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
PD T +++ GL ++ + EA
Sbjct: 325 HPDVRTYTIMINGLCQQGLLAEA 347
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 141/312 (45%), Gaps = 10/312 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
+ + K +S + +L + + I Y N LI S+ A + +LG
Sbjct: 20 ITRMKHYSTVLSLYK-QMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQP 78
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
S +F L+ C ++ + + LFD++ + PD ++YG L+ C +AL
Sbjct: 79 STATFTTLIRGLCVEGKIGEALQ-LFDKMTGE-GFQPDVLTYGTLINGLCKDRQLTEALS 136
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
L ++M KG+ TY+++++ L G+ +EA RL+ M + + D +N +
Sbjct: 137 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 196
Query: 250 GGDPERLKE----LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
++ + L +EM GL PDT++YN L+ C + +A ++ + G P
Sbjct: 197 KEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 256
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+R +LC + +A + K + PD + ++++G+ + +++ A+ +
Sbjct: 257 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 316
Query: 366 RTIKKK-FPPNV 376
+ K P+V
Sbjct: 317 SKLSSKGLHPDV 328
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 42/248 (16%)
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
P S++ F+ LL + TR + Y V L+ ++ + + + + +L+ S C A
Sbjct: 7 PPSIVDFSKLLTSITRMKHYSTVLSLYKQM-DSFGIPHNTYTLNILINSFCHLNRLGFAF 65
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+L ++ G + +T T+TT++ L +G EA +L+
Sbjct: 66 SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLF---------------------- 103
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
D+M G +PD ++Y L+ CK+ + EA ++ + G SPN
Sbjct: 104 ------------DKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNF 151
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIK---EAKG 363
T+ + I+ LC G++ +A ++F M+H+ +PD T LV+ L K+ I+ +A G
Sbjct: 152 TYSSLIHGLCILGHWKEAIRLFY--AMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMG 209
Query: 364 VIRTIKKK 371
+ + ++
Sbjct: 210 LFEEMSQQ 217
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 11/224 (4%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ F M G + ++++L+ C + + + + I +K + PD++++ L
Sbjct: 134 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK--IMPDQLTFNTL 191
Query: 175 LKSHCDSGS---SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+ + C G DKA+ L EM +G+ TVTY T+++ L G +A L+ EM
Sbjct: 192 VDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVV 251
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
G D+ Y RI Y RL E L+ + L PD Y+ +M C+ +
Sbjct: 252 YGQIPDLVTY--RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 309
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ A+ ++ L G P+ T+ I LC G +A K+F E
Sbjct: 310 EAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 353
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS---RLYDKVPILFDEI 158
+LI G + A+R F M ++FN L+ A + ++ DK LF+E+
Sbjct: 155 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEM 214
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
++ L PD ++Y L+ C G A+ L +EM G VTY + + L K
Sbjct: 215 SQQ-GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 273
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNF 277
EA L +E +D D+ Y++ + G+ E ++L ++ GL PD +Y
Sbjct: 274 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 333
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
++ C+ ++ EA K++ ++EN +T R
Sbjct: 334 MINGLCQQGLLAEASKLFGEMDENDIESYSTFSR 367
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 38/178 (21%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRL------------YDKVP-- 152
G + D AM F++M + G +++N L+ C RL Y ++P
Sbjct: 199 GMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDL 258
Query: 153 ----ILFDEIPKKY---------------NLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
ILFD + K + NL PD Y +++ C +G + A +L ++
Sbjct: 259 VTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK 318
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+ +KG+ TYT ++N L +QG EA +L+ EM++ D+ +Y+ N + G
Sbjct: 319 LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN----DIESYSTFSRNAFKG 372
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 142/277 (51%), Gaps = 6/277 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+ R+Y QA + D A+R+F++MDE G ++ F+ LLF +++ + FD+ ++
Sbjct: 153 IFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRF 212
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+ +Y +L+ D G S+KA EL M +G V + Y +L L K G +EA
Sbjct: 213 LLTAK--TYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEA 270
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ ++ +M K V+ D Y++ I ++Y D + ++D+MR + P+ +YN ++
Sbjct: 271 KTIFHDMLSKRVEPDAFTYSIFI-HSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIK 329
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKNE ++EA + + + G P+ ++ + C ++A ++ + +P
Sbjct: 330 RLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLP 389
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
D +T ++++ L++ + + V + KKF P+V
Sbjct: 390 DRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYPSV 426
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 149/351 (42%), Gaps = 40/351 (11%)
Query: 41 PDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
PD A+ ++ + + P + + + L + L K+K + + KN +T + Y
Sbjct: 163 PDGAIRSFNRMDEFGIKPTINDFDKLLFI--LCKTKHVKQAQQFFDQAKNRFLLTAKTYS 220
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI +G G + A F M E G P ++++N LL A + D+ +F ++
Sbjct: 221 I-LISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLS 279
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + PD +Y + + S+CD+ AL +L++M + TY ++ L K + E
Sbjct: 280 K-RVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVE 338
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
EA L EM +GV +PDT SYN +
Sbjct: 339 EAYLLLDEMISRGV----------------------------------RPDTWSYNAIQA 364
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+C + ++ A ++ +E++ C P+ T+ + L G FDK KV+ P
Sbjct: 365 YHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYP 424
Query: 341 DFNTVKLLVEGLVKKK-KIKEA-KGVIRTIKKKFPPNVLRAWKKVEEELGL 389
+T +++ G KKK K++EA K I + PP V + LGL
Sbjct: 425 SVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLGL 475
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 113/237 (47%), Gaps = 4/237 (1%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G SV+SF+ L+ + + + E+ + + + L+ +++ + D
Sbjct: 106 GFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDG 165
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ N M+ G++ T + +L L K + ++A++ + + + + + L Y++ I+
Sbjct: 166 AIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFL-LTAKTYSILIS 224
Query: 247 NTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+G GD E+ EL M + G D ++YN L+ CK +DEAK ++ +
Sbjct: 225 G-WGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVE 283
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P+A T+ +I+ C + + A +V + + +P+ T +++ L K + ++EA
Sbjct: 284 PDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEA 340
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 11/286 (3%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y + A+ DQM E+G +F L+
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D++ ++ PD ++YG ++ C G D AL LLN+ME ++ V + T+
Sbjct: 206 EAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYG--GDPERLKELIDEMRD 265
++ L K + E A L++EME KG+ +V YN + YG D R L+ M +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASR---LLSNMLE 321
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
+ P+ +++N L+ + K + EA+K++E + + P+ T+ I C D+
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
A ++FK V +P+ T L+ G K K++++ + R + ++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ ++M+ +V+ FN ++ + + R + LF E+ K + P+ ++
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK-GIRPNVVT 295
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ C+ G A LL+ M K + VT+ +++ +K+G EAE+L EM
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
++ +D D YN+ I + K++ M P+ +YN L+ +CK + ++
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP-DFNTVKLL 348
+ +++ + + G N T+ T I +G+ D A VFK+ V +++P D T +L
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV-SNRVPTDIMTYSIL 474
Query: 349 VEGLVKKKKIKEAKGVIRTIKK-KFPPNVLRAWKKVEEELGLVPAPAVGDG 398
+ GL K+ A + + ++K + N+ +E G+ A VG+
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE---GMCKAGKVGEA 522
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + F+ + +QM LG + +++ + C RS+L + +L +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ LL +C S A+ L+++M G + T T+TT+++ L+ A E
Sbjct: 149 Y--EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +M ++G D+ Y + GD + L+++M A +K + + +N ++
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK ++ A ++ +E G PN T+ + I LC G + A ++ + P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 341 DFNTVKLLVEGLVKKKKIKEAK 362
+ T L++ K+ K+ EA+
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAE 348
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 134/306 (43%), Gaps = 40/306 (13%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN- 102
A+D+++ + P Y + L R+SD L+ S+ + KI N
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNS--LINCLCNYGRWSDASRLL-SNMLEKKINPNVVTFNA 333
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ + G A + ++M + I++N L+ C +RL D+ +F + K
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL-DEAKQMFKFMVSK 392
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ +Y L+ C + +EL EM +G+ TVTYTT++ ++ G+ +
Sbjct: 393 DCL-PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDS 451
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERL------------------KELID 261
A+ ++ +M V D+ Y++ + +YG L +I+
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 262 EMRDAG-------------LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
M AG +KPD ++YN +++ C ++ EA ++ ++E+G PN+
Sbjct: 512 GMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 309 TFRTWI 314
T+ T I
Sbjct: 572 TYNTLI 577
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 18/246 (7%)
Query: 144 RSRLYDKVPI-----LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
R+RL D + + LF ++ K P + + LL + + + L +M+ G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE 258
+ TY+ +NC ++ A + ++M K G + D+ + + N Y +R+ +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS-SLLNGY-CHSKRISD 171
Query: 259 ---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L+D+M + G KPDT ++ L+ + EA + + + + GC P+ T+ T +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 316 HLCGSGNFDKAYKVFKE---SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
LC G+ D A + + + + + FNT+ ++ L K + ++ A + ++ K
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTI---IDSLCKYRHVEVAVDLFTEMETKG 288
Query: 372 FPPNVL 377
PNV+
Sbjct: 289 IRPNVV 294
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 41/318 (12%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
P + L N + Y + + F+ +LG +V +FN +++ C ++ D
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG------------ 198
V L + KYN SPD ++Y +L + C G A +LL +M+++G
Sbjct: 228 VEFL--NVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285
Query: 199 ---------------VEVTT--------VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+E+ T TY ++N L +G EEA +L EME +
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345
Query: 236 LDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV +YN I + E K L++EM + G+KP+ +++N ++ YCK MD+A
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFK-LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASN 404
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+EE+G SP+ T+ T I C +GN +A++ E + D T+ ++ L
Sbjct: 405 TITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLC 464
Query: 354 KKKKIKEAKGVIRTIKKK 371
++KK++EA ++ + +K+
Sbjct: 465 REKKLEEAYKLLSSARKR 482
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y +AG A RT D+M ++ N +L C +L + +L +
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + D++SYG L+ + G+ D+AL+L +EM+ K + +TVTY ++ L + G E+
Sbjct: 484 YFI--DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +E+ + G+ D YN I + Y GD E+ + ++M + KPD + N L+
Sbjct: 542 AISKLNELLESGLLPDETTYNT-ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C ++++A K++ G + + T+ T I LC G D A+ + E
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTI--KKKFPPNVLR 378
PD T ++ L +I+EA+ + + K P VL+
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQ 701
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ Y + G D A T +M+E G +++N L+ ++ + DE+ +K
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK- 447
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ D ++ +L++ C ++A +LL+ +G + V+Y T++ +K GN + A
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+LW EM++K + YN I G E+ ++E+ ++GL PD +YN ++
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ +++A + + + EN P+ T + LC G +KA K+F V K D
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAID 627
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L+ L K+ ++ +A ++ +++K
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 138/300 (46%), Gaps = 35/300 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
LI G + A + D+M+ L V+S+N L+ C + L +E+ +K
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378
Query: 162 -------YNL--------------------------SPDKISYGLLLKSHCDSGSSDKAL 188
+N+ SPD ++Y L+ +C +G+ +A
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
++EM K +++ +VT T+L L ++ EEA +L S K+G +D +Y I
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ G+ +R +L DEM++ + P T++YN ++ C+ ++A L E+G P+
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TT+ T ++ C G+ +KA++ + V PD T +L+ GL + +++A + T
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 47/324 (14%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R L + K+ + L+ S + E LI Y + G D A++ +D+M E
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519
Query: 129 PRSVISFNAL---LFACTR-----SRLYDKVP--ILFDE---------------IPKKY- 162
S +++N + L C + S+L + + +L DE + K +
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579
Query: 163 --------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ PD + +LL+ C G +KAL+L N +KG + TVTY T++ L
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
K+G ++A L SEME+K + D YN IT T G +E + +M + G PD +
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+D+ + V ++ + WI LC G + A ++F ES
Sbjct: 700 L------------QLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGES 747
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKK 357
D +T L++GL+K++K
Sbjct: 748 KQKGITVDKSTYINLMDGLIKRRK 771
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 9/272 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
L++ + G + A +M G + ++N +L + C R + + E+ K+
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE----VLREM-KE 320
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +SY +L++ ++G + A +EM +G+ T TY T+++ L+ + E
Sbjct: 321 IGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEA 380
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE L E+ +KG+ LD YN+ I N Y GD ++ L DEM G++P +Y L+
Sbjct: 381 AEILIREIREKGIVLDSVTYNILI-NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ EA +++E + G P+ T + C GN D+A+ + KE M+
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L+ GL + K +EA+ ++ +K++
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G + A D+M + G + ++N L+ + IL EI +K
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK- 391
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D ++Y +L+ +C G + KA L +EM G++ T TYT+++ L ++ EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++ KG+ D+ N + G+ +R L+ EM + PD ++YN LM
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +EA+++ ++ G P+ ++ T I G+ A+ V E + + P
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPT 571
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
T L++GL K ++ + A+ ++R +K + PN
Sbjct: 572 LLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 2/257 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V + Y + + L + E LI + + LI Y Q G A
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
D+M G + ++ +L++ R + LF+++ K + PD + L+ H
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGH 477
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G+ D+A LL EM+ + VTY ++ L +G EEA L EM+++G+ D
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+YN I+ + GD + + DEM G P ++YN L+ KN+ + A+++
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 298 LEENGCSPNATTFRTWI 314
++ G PN ++F + I
Sbjct: 598 MKSEGIVPNDSSFCSVI 614
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 38/269 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Q M D A+ F M E G + N +L +R + + + ++ +
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM-YRM 219
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + ++ +++ C G KA L ME G++ T VTY T++ +G E A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ SEM+ KG D+ YN + ++ + R E++ EM++ GL PD++SYN L+
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPIL--SWMCNEGRASEVLREMKEIGLVPDSVSYNILI--- 334
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
GCS N G+ + A+ E V +P F
Sbjct: 335 ------------------RGCSNN--------------GDLEMAFAYRDEMVKQGMVPTF 362
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L+ GL + KI+ A+ +IR I++K
Sbjct: 363 YTYNTLIHGLFMENKIEAAEILIREIREK 391
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 256 LKELIDEM---RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
++ L DE+ D TI ++ L+ C C+ M+DEA + + ++E G P T
Sbjct: 136 IRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNH 195
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ L + A+ + + + + T +++ L K+ K+K+AKG +
Sbjct: 196 ILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFL 248
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 187/435 (42%), Gaps = 78/435 (17%)
Query: 18 GSSTTASSISVSKAKSKLRS---EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAK 74
G S S +S K +LRS + D A+ ++ S+ + P + + + LA+
Sbjct: 45 GFSGLTSDRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGL--LAR 102
Query: 75 SKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVI 133
+K++ D+ + I + Y N +I + + A ++ +LG + +
Sbjct: 103 TKQY-DLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTV 161
Query: 134 SFNALLFA-CTRSRLYDKVP-----ILFDEIPKKYNLS---------------------- 165
+FN LL C R+++ V +L +P L+
Sbjct: 162 TFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARM 221
Query: 166 ------PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
P++ +YG +L C SG++ AL+LL +ME++ ++ VTYT +++ L K G
Sbjct: 222 MANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRL 281
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN--TYG--------------------------- 250
++A +SEME KG+ +V YN I + ++G
Sbjct: 282 DDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSAL 341
Query: 251 -------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G K+L +EM G++P+TI+YN L+ C ++ +DEA ++ + + GC
Sbjct: 342 IDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGC 401
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ I C + D ++F++ + I D T L++G + +K+ AK
Sbjct: 402 DPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKK 461
Query: 364 VIR-TIKKKFPPNVL 377
V + + + P ++
Sbjct: 462 VFQEMVSQGVHPGIM 476
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 159/344 (46%), Gaps = 27/344 (7%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFS---DIETLIESHKNDPKITQEPY 99
+A+D+ + + + P Y L R+ KS + D+ +E K P +
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILN--RMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
+ I + + G D A+ F +M+ G +V ++N+L+ + C+ R D +L D I
Sbjct: 271 I---IDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+K ++P+ +++ L+ S G +A +L NEM +G+E T+TY +++ L
Sbjct: 328 TRK--ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
+EA ++ M KG D D+ YN+ I + L +M G+ DT++Y+
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +C++ + AKKV++ + G P T+ + LC +G ++A + + +H
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ---MH 502
Query: 338 KIP---DFNTVKLLVEGLVKKKKIKEA---------KGVIRTIK 369
K D +++ G+ K+ +A KGV R I+
Sbjct: 503 KCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQ 546
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 9/233 (3%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C RL D + F E+ K + + +Y L+ S C G D +LL +M + +
Sbjct: 276 CKDGRLDDALS-FFSEMETK-GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITP 333
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKE-- 258
VT++ +++ L K+G EA+ L++EM +G++ + YN I YG + +RL E
Sbjct: 334 NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLI---YGLCNDKRLDEAN 390
Query: 259 -LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
++D M G PD +YN L+ +CK + +D+ +++ + G + T+ T I
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
C S A KVF+E V P T +L++GL +++EA G++ + K
Sbjct: 451 CQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 139/310 (44%), Gaps = 11/310 (3%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
T + ++ S L E +A D+Y+ + P + Y + L KR +
Sbjct: 332 TPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNS--LIYGLCNDKRLDEA 389
Query: 82 ETLIE---SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
+++ S DP I L N + +A D MR F +M G ++++ L
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILIN---GFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTL 446
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
+ +SR +F E+ + + P ++Y +LL CD+G ++AL +L++M
Sbjct: 447 IQGFCQSRKLIVAKKVFQEMVSQ-GVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLK 257
+E+ Y +++ + ++A L+ + KGV D+ +YN+ ++
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L +M++ G +PD +YN L+ + + + + ++ E ++ G S +A+T + + +
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKI-VMDM 624
Query: 318 CGSGNFDKAY 327
SG DK++
Sbjct: 625 LSSGELDKSF 634
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 118/269 (43%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S + G A +++M G + I++N+L++ + D+ + D + K
Sbjct: 341 LIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK- 399
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y +L+ C + D + L +M +G+ TVTY+T++ + A
Sbjct: 400 GCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVA 459
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++++ EM +GV + Y + + G+ E ++D+M ++ D YN ++
Sbjct: 460 KKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHG 519
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +D+A ++ L G + ++ + LC + +A +F++ PD
Sbjct: 520 MCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPD 579
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T L+ ++ I + +I +K+
Sbjct: 580 GCTYNTLIRAHLRGNDITTSVQLIEEMKR 608
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKK 161
LI + GM D A+R F Q + G + FNAL+ C R R D + + +
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYI--LMGM 513
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + PD ++Y +L+K + G D+AL L ++ KG + Y T+++ K+ +
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPAT 573
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M+ G+ D+ YNV I + G E + EL+ E+ GL+PD ++YN ++
Sbjct: 574 GLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMIC 633
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YC ++ +A K++E L+ PNA TF I C G D A +F + P
Sbjct: 634 GYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEP 693
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++G K + + A + + + + PN++
Sbjct: 694 NILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV 731
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 147/323 (45%), Gaps = 13/323 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK-ITQEPYL 100
D+A+D ++ +SK S S YA + L S R I+ ++E+++ K + ++
Sbjct: 157 DRAVDTFAWMSKMGVS--ISHYAASEMLDLLIDSDR---IDVILENYEEMCKGLGVYEFV 211
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N S+ + G + + + E G ++ N +L FD + +
Sbjct: 212 FN---SFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVR 268
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
SP+ +++ L+ +C D+A L N M KG+ V Y+ ++N L++ G E
Sbjct: 269 S-GPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
E L+S +GV +DV ++ I + Y GD + E+ M G+ P+ ++Y+ L
Sbjct: 328 EGNSLFSMALARGVKMDVVIFS-SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+N + EA V+ + + G P+ T+ + I C S N + ++ +
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
+PD +L+ GL ++ + EA
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEA 469
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 77 RFSDIETLIESHKNDPKITQEP--YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+F ++E L E H + P L+ Y + GM D A+ TF M ++G S +
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYA 177
Query: 135 FNALLFACTRSRLYDKVPILFD-----------------------EIPKKYNLSPDKISY 171
+ +L S D++ ++ + E+ K N +
Sbjct: 178 ASEMLDLLIDS---DRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVER 234
Query: 172 GL---------LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
GL +LK C A + + M G VT++T++N K+ +EA
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L++ M +KG+ D+ Y++ I + G E L G+K D + ++ +M
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + + +A +VY + + G SPN T+ I LC +G +A VF + + P
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++G K + +++ G+ + +K
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
++ F M G + +N L+ R + V L EI K Y L PD ++Y ++
Sbjct: 574 GLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK-YGLEPDIVTYNTMI 632
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+C KA++L ++ + +T+T +++ K G ++A ++S M ++G +
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692
Query: 236 LDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++ Y+ I + + E EL ++M + P+ +SY+ L+ CK +M+EA
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLA 752
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
++ P+ + I C G +A ++ ++ +PD
Sbjct: 753 FQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 125/284 (44%), Gaps = 15/284 (5%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+++ +Y + G A+ + +M + G +V++++ L+ C R+ + + F +I K
Sbjct: 350 SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGV-FGQILK 408
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ L P ++Y L+ C S + L M KG V + ++N L +QG +
Sbjct: 409 Q-GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLK------PDTIS 274
EA R + + K+G+ L+ +N I + RLK D ++ L PD ++
Sbjct: 468 EALRFFFQAVKRGLTLNNYLFNALIDGCF-----RLKRTRDGLKMYILMGMYKVIPDVVT 522
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L+ + +DEA ++ L + G SP+ + T I C + ++FK
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD +L+ ++ ++ ++R IK P+++
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 22/267 (8%)
Query: 116 AMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIP--------------- 159
A+R F+ + LG V SF + R R++D +FD +
Sbjct: 72 ALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGS 131
Query: 160 -KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ Y +P + Y LL +C +G D+A++ M GV ++ + +L+ L
Sbjct: 132 FRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDR 190
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ + EM KG+ + +N + G+ E+ + + GL P + N +
Sbjct: 191 IDVILENYEEM-CKGLGVYEFVFNSFLKR---GEVEKGLNFHRALVERGLVPKIVDCNKI 246
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C + A ++ + +G SPN TF T I C D+A+ ++ +
Sbjct: 247 LKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+PD +L+ GL + K++E +
Sbjct: 307 VPDLVIYSILINGLFRAGKLEEGNSLF 333
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 157/328 (47%), Gaps = 11/328 (3%)
Query: 28 VSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES 87
V KA KLR D+A++++ + + P Y + L K +R + L++
Sbjct: 193 VIKALCKLRF---VDRAIEVFRGMPERKCLPDGYTYCT--LMDGLCKEERIDEAVLLLDE 247
Query: 88 HKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRS 145
+++ + P + N LI + G + D M G + +++N L+ C +
Sbjct: 248 MQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 146 RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
+L V +L + K P+ ++YG L+ + A+ LL+ ME +G +
Sbjct: 307 KLDKAVSLLERMVSSK--CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMR 264
Y+ +++ L+K+G AEEA LW +M +KG ++ Y+V + G P KE+++ M
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
+G P+ +Y+ LM + K + +EA +V++ +++ GCS N + I LCG G
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+A V+ + + + PD +++GL
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 149/313 (47%), Gaps = 10/313 (3%)
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRS 131
A S F +E L+ + + ++ E + R+YG+A + D A+ F +M DE RS
Sbjct: 88 ANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRS 147
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPK---KYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V SFN++L LY + +D + N+SP+ +S+ L++K+ C D+A+
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
E+ M + TY T+++ L K+ +EA L EM+ +G YNV I
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
GD R+ +L+D M G P+ ++YN L+ C +D+A + E + + C PN
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN--TVKLLVEGLVKKKKIKEAKGVI 365
T+ T I L A ++ S M + N +L+ GL K+ K +EA +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLL--SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385
Query: 366 RTIKKK-FPPNVL 377
R + +K PN++
Sbjct: 386 RKMAEKGCKPNIV 398
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 8/303 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDP--KITQEPY-LCNLIRSYGQAGMFDHAMRTFDQ 122
+L ++ L K RF D IE + P K + Y C L+ + D A+ D+
Sbjct: 191 NLVIKALCKL-RFVD--RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G S + +N L+ + +V L D + K P++++Y L+ C G
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK-GCVPNEVTYNTLIHGLCLKG 306
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
DKA+ LL M + VTY T++N L KQ A +A RL S ME++G L+ Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
V I+ + G E L +M + G KP+ + Y+ L+ C+ +EAK++ + +
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC PNA T+ + + +G ++A +V+KE + +L++GL ++KEA
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 362 KGV 364
V
Sbjct: 487 MMV 489
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 144/350 (41%), Gaps = 21/350 (6%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+ + + P Y + L K +R +D L+ S + +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGT--LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G + AM + +M E G +++ ++ L+ R ++ + + +
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ +Y L+K +G ++A+++ EM+ G Y+ +++ L G +E
Sbjct: 427 GCL-PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEM---RDAGLKPDTISYNF 277
A +WS+M G+ D AY+ I G G + +L EM + +PD ++YN
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ C + + A + + + GC P+ T T++ L N + F E ++V
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
L+K++++ A ++ + K+ W + E+
Sbjct: 606 --------------LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREI 641
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 115/294 (39%), Gaps = 76/294 (25%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN--------------------- 192
+F PK + + +++S+ +SG D +LL+
Sbjct: 63 MFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAY 122
Query: 193 ---EMENKGVEV------------TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+ +K V++ + ++ +VLN + +G + + ++++
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 238 VA----AYNV------------RITNTYGGDPER----------------LKE------- 258
++ ++N+ R + G PER KE
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 259 -LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L+DEM+ G P + YN L+ CK + K+ + + GC PN T+ T I+ L
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
C G DKA + + V IP+ T L+ GLVK+++ +A ++ +++++
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 10/319 (3%)
Query: 55 YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS-YGQAGMF 113
YA P + Y V RL K+KR D +E I + ++ N + S Q
Sbjct: 4 YAPPDALTYGP--IVERLCKTKRIDDALATVEEMATR-GIKPDAFIYNFVLSGLCQEEKV 60
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A F++M + +V+++N L+ ++ + LF E+ K P ++SY
Sbjct: 61 EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNT 119
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C A ++ ++M VTYTT+++ L K G + A + M KKG
Sbjct: 120 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 179
Query: 234 VDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
V +VA Y+ I R+ E L+++M G+ P ++YN L+ C+ + +++
Sbjct: 180 VTPNVATYSCLIDGF--CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLED 237
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A K++ G+ + C P T+ T + LC D A++++ E + PD T L
Sbjct: 238 AFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAW 297
Query: 351 GLVKKKKIKEAKGVIRTIK 369
GL + K+ EA+ ++ +K
Sbjct: 298 GLTRAGKVHEAQELMEKMK 316
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 2/239 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +A + A F +M G + +S+N L+ + + +FD++ +
Sbjct: 85 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS- 143
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N P+ ++Y L+ SG A E+L+ M KGV TY+ +++ K +EA
Sbjct: 144 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 203
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M +G+ V YN+ + + D E +L M P ++YN L+
Sbjct: 204 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 263
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C ++ +D A ++Y + GC P+A T+ T + L +G +A ++ ++ + + P
Sbjct: 264 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 36/242 (14%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++YG +++ C + D AL + EM +G++ Y VL+ L ++ EEA L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ +M K+ ++ +V YN I E EL EM G P +SYN L+ +CK
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 285 NEMMDEAKKVYE-----------------------------------GLEENGCSPNATT 309
+ + AK V++ G+ + G +PN T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ I C D+A+K+ ++ V P T +L+ L + K+++A + R +
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 370 KK 371
++
Sbjct: 247 QR 248
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 248 TYGGDPERLKEL---------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
TYG ERL + ++EM G+KPD YNF+++ C+ E ++EA+ ++E +
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+ +PN T+ T I LC + + AY++FKE +P + L++G KKK +
Sbjct: 71 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 130
Query: 359 KEAKGVI-RTIKKKFPPNVL 377
AK V + ++ PNV+
Sbjct: 131 VAAKDVFDKMVRSNCVPNVV 150
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 155/381 (40%), Gaps = 79/381 (20%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ + A+ QM E+G +FN L+ R
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + K PD ++YG+++ C G D AL LL +ME +E V Y T+
Sbjct: 204 EAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYG--GDPERL--------- 256
++ L N +A L++EM+ KG+ +V YN +R YG D RL
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 257 -----------------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
++L DEM + PD +Y+ L+ +C ++ +DEAK
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-------------SVMVHK-- 338
++E + C PN T+ T I C + D+ ++F+E + ++H
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 339 --------------------IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+PD T +L++GL K++ A V +++ K P++
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 378 RAWKKVEEELGLVPAPAVGDG 398
+E G+ A V DG
Sbjct: 503 TYNIMIE---GMCKAGKVEDG 520
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 154/333 (46%), Gaps = 12/333 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
+ AL++++ + P Y +R L R+SD L+ K +P +
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNS--LIRCLCNYGRWSDASRLLSDMIERKINPNVVT-- 328
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
LI ++ + G A + +D+M + + ++++L+ C RL D+ +F+
Sbjct: 329 -FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFEL 386
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K + P+ ++Y L+K C + D+ +EL EM +G+ TVTYTT+++ ++
Sbjct: 387 MISK-DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+ A+ ++ +M GV D+ Y++ + G E + + ++ + ++PD +YN
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK +++ ++ L G PN T+ T + C G ++A +F+E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+PD T L+ ++ + +IR ++
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR G + A R M E +V++F+AL+ A + + L+DE+ K+
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ PD +Y L+ C D+A + M +K VTY T++ K +E
Sbjct: 356 -SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM ++G+ + Y I + + + + + +M G+ PD ++Y+ L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C N ++ A V+E L+ + P+ T+ I +C +G + + +F + P
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+ T ++ G +K +EA + R +K++ P
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + + LL + D + L +M+N G+ TY+ ++NC ++ A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
++M K G + D+ N + +G L+ +M + G +PD+ ++N L+ +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ EA + + + GC P+ T+ + LC G+ D A + K+ P
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+++ L K + +A + + K PNV+
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D A+ L +M + V ++ +L+ + K + L +M+ G+ ++ Y++
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 245 ITNTYGGDPERLKEL--IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I N + + L + +M G +PD ++ N L+ +C + +A + + E G
Sbjct: 123 I-NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P++ TF T I+ L +A + V+ PD T ++V GL K+ I A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 363 GVIRTIKK-KFPPNVL 377
+++ +++ K P V+
Sbjct: 242 SLLKKMEQGKIEPGVV 257
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 166/364 (45%), Gaps = 15/364 (4%)
Query: 18 GSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
+S +S S LR E D +L+ + S+S + + + + +L ++
Sbjct: 31 ANSLNVCPVSESHVVKVLRQEHDIVSSLEYFKSLSNS-GTFKHTHLTYETMIDKLGRNNE 89
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+ L++ K + + +I+ Y ++ + + ++ F ++ E G SV +N
Sbjct: 90 MDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNL 149
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
+L A L+ + L++ + K L P+ +Y +LLK+ C +G D A +LL EM NK
Sbjct: 150 VLDALLSQNLFKMINALYNNM-KSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNK 208
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-RL 256
G + V+YTTV++ + K G+ ++A L + E V YN I +G E R
Sbjct: 209 GCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPV-----VPVYNALI---HGVCKECRF 260
Query: 257 KE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
KE L++EM D G+ P+ ISY+ +++C ++ + V+ + GC PN TF +
Sbjct: 261 KEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSL 320
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KF 372
I G A ++ + P+ L+ GL + EA V ++K
Sbjct: 321 IKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSI 380
Query: 373 PPNV 376
PNV
Sbjct: 381 RPNV 384
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 8/273 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + F A ++M + G +VIS++ ++ + + +F + +
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVR- 308
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++ L+K G A+ L N M +GV V Y T+++ L GN +EA
Sbjct: 309 GCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA 368
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYNFL 278
+W++MEK + +V Y+ I YG GD E ++M + G +P+ + Y +
Sbjct: 369 ISVWNQMEKDSIRPNVTTYSTII---YGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+ M D+A + + + +GC P TF +I LC +G + A V +
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYEC 485
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+P+ T L++GL + +EA G+IR ++++
Sbjct: 486 LPNIRTYNELLDGLFRANAFREACGLIRELEER 518
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 3/255 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + ++G A T+++M G +V+ + ++ + ++D+ L D +
Sbjct: 390 IIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISD- 448
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P I++ +K C +G + A+ +L++ME TY +L+ L++ EA
Sbjct: 449 GCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREA 508
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L E+E++ V+ D YN + ++ G +++ +L+ +M G+K DTI+ N +
Sbjct: 509 CGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNA 568
Query: 282 YCKNEMMDEAKKVYEGLE-ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK + A KV + + E + T ++ +C ++A E + P
Sbjct: 569 YCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFP 628
Query: 341 DFNTVKLLVEGLVKK 355
+ T +LV G K
Sbjct: 629 NIATWNVLVRGFFSK 643
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 116/278 (41%), Gaps = 4/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + G A+ ++ M G +V+++N L+ D+ +++++ K
Sbjct: 320 LIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKD- 378
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ +Y ++ SG A E N+M N G V YT +++ L + ++A
Sbjct: 379 SIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQA 438
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M G V +N I G E ++D+M P+ +YN L+
Sbjct: 439 FDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDG 498
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ EA + LEE + T+ T +Y +G + ++ + ++ D
Sbjct: 499 LFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLD 558
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI--KKKFPPNVL 377
TV V K K+K A V+ I +K+F +++
Sbjct: 559 TITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADII 596
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 162/355 (45%), Gaps = 14/355 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ AL + + +P Y + ++ L K R D +L + D +
Sbjct: 282 EAALRLVEEMKGKGCAPTVFTYTE--LIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLIN 339
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI G+AG + A++ F +MD L +V+++N ++ A S+ L+ E K
Sbjct: 340 NLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKA 399
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P +Y +L+ C + +KAL LL EM+ KG Y ++++ L + E
Sbjct: 400 NGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEA 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFL 278
A L+ E+++ Y V I + G+ RL + +D EM+ G PD +YN L
Sbjct: 460 ANELFQELKENCGRSSARVYAVMI--KHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNAL 517
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M+ + M+DEA + + ENGC+P+ + + L +G +A ++F +
Sbjct: 518 MSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEI 577
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFP------PNVLRAWKKVEEE 386
+PD + ++ L + + A ++R +K K F ++L A KV+E+
Sbjct: 578 MPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDED 632
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 7/277 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ G+A M + A+ F Q+ + +N L+ ++K+ L++EI +
Sbjct: 165 ILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG 224
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N SPD I+Y L+ + D A L +EM+ G+ T YTT+L +K E A
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
RL EM+ KG V Y I G R+ + L M G KPD + N L+
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGL--GKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI 342
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ +++A K++ ++ C+PN T+ T I + S ++ E + + I
Sbjct: 343 NILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGI 402
Query: 340 -PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
P T +L++G K ++++A ++ + +K FPP
Sbjct: 403 APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKK 161
LI + GM D A+R F Q + G + FNAL+ C R R D + + +
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYI--LMGM 513
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + PD ++Y +L+K + G D+AL L ++ KG + Y T+++ K+ +
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPAT 573
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M+ G+ D+ YNV I + G E + EL+ E+ GL+PD ++YN ++
Sbjct: 574 GLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMIC 633
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YC ++ +A K++E L+ PNA TF I C G D A +F + P
Sbjct: 634 GYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEP 693
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++G K + + A + + + + PN++
Sbjct: 694 NILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIV 731
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 147/323 (45%), Gaps = 13/323 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK-ITQEPYL 100
D+A+D ++ +SK S S YA + L S R I+ ++E+++ K + ++
Sbjct: 157 DRAVDTFAWMSKMGVS--ISHYAASEMLDLLIDSDR---IDVILENYEEMCKGLGVYEFV 211
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N S+ + G + + + E G ++ N +L FD + +
Sbjct: 212 FN---SFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVR 268
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
SP+ +++ L+ +C D+A L N M KG+ V Y+ ++N L++ G E
Sbjct: 269 S-GPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
E L+S +GV +DV ++ I + Y GD + E+ M G+ P+ ++Y+ L
Sbjct: 328 EGNSLFSMALARGVKMDVVIFS-SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSIL 386
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+N + EA V+ + + G P+ T+ + I C S N + ++ +
Sbjct: 387 INGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGH 446
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
+PD +L+ GL ++ + EA
Sbjct: 447 VPDVVVCSMLINGLSRQGMMDEA 469
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 77 RFSDIETLIESHKNDPKITQEP--YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+F ++E L E H + P L+ Y + GM D A+ TF M ++G S +
Sbjct: 118 QFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYA 177
Query: 135 FNALLFACTRSRLYDKVPILFD-----------------------EIPKKYNLSPDKISY 171
+ +L S D++ ++ + E+ K N +
Sbjct: 178 ASEMLDLLIDS---DRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVER 234
Query: 172 GL---------LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
GL +LK C A + + M G VT++T++N K+ +EA
Sbjct: 235 GLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEA 294
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L++ M +KG+ D+ Y++ I + G E L G+K D + ++ +M
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + + +A +VY + + G SPN T+ I LC +G +A VF + + P
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++G K + +++ G+ + +K
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 120/278 (43%), Gaps = 6/278 (2%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI + + ++ F M G + +N L+ R + V L EI
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREI-I 617
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
KY L PD ++Y ++ +C KA++L ++ + +T+T +++ K G +
Sbjct: 618 KYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMD 677
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLM 279
+A ++S M ++G + ++ Y+ I + + E EL ++M + P+ +SY+ L+
Sbjct: 678 DAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILI 737
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +M+EA ++ P+ + I C G +A ++ ++ +
Sbjct: 738 DGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIM 797
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
PD LL + L + + T+ + P N+L
Sbjct: 798 PD----DLLQKALAEYGFQDSQASIYSTVFPESPLNLL 831
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 125/284 (44%), Gaps = 15/284 (5%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+++ +Y + G A+ + +M + G +V++++ L+ C R+ + + F +I K
Sbjct: 350 SIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGV-FGQILK 408
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ L P ++Y L+ C S + L M KG V + ++N L +QG +
Sbjct: 409 Q-GLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMD 467
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLK------PDTIS 274
EA R + + K+G+ L+ +N I + RLK D ++ L PD ++
Sbjct: 468 EALRFFFQAVKRGLTLNNYLFNALIDGCF-----RLKRTRDGLKMYILMGMYKVIPDVVT 522
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L+ + +DEA ++ L + G SP+ + T I C + ++FK
Sbjct: 523 YTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQ 582
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD +L+ ++ ++ ++R IK P+++
Sbjct: 583 SNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIV 626
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 22/267 (8%)
Query: 116 AMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIP--------------- 159
A+R F+ + LG V SF + R R++D +FD +
Sbjct: 72 ALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGS 131
Query: 160 -KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ Y +P + Y LL +C +G D+A++ M GV ++ + +L+ L
Sbjct: 132 FRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDR 190
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ + EM KG+ + +N + G+ E+ + + GL P + N +
Sbjct: 191 IDVILENYEEM-CKGLGVYEFVFNSFLKR---GEVEKGLNFHRALVERGLVPKIVDCNKI 246
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C + A ++ + +G SPN TF T I C D+A+ ++ +
Sbjct: 247 LKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGI 306
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+PD +L+ GL + K++E +
Sbjct: 307 VPDLVIYSILINGLFRAGKLEEGNSLF 333
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 148/318 (46%), Gaps = 41/318 (12%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
P + L N + Y + + F+ +LG +V +FN +++ C ++ D
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG------------ 198
V L + KYN SPD ++Y +L + C G A +LL +M+++G
Sbjct: 228 VEFL--NVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285
Query: 199 ---------------VEVTT--------VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+E+ T TY ++N L +G EEA +L EME +
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345
Query: 236 LDVAAYNVRITNT--YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV +YN I + E K L++EM + G+KP+ +++N ++ YCK MD+A
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFK-LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASN 404
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+EE+G SP+ T+ T I C +GN +A++ E + D T+ ++ L
Sbjct: 405 TITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLC 464
Query: 354 KKKKIKEAKGVIRTIKKK 371
++KK++EA ++ + +K+
Sbjct: 465 REKKLEEAYKLLSSARKR 482
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 8/281 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y +AG A RT D+M ++ N +L C +L + +L +
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + D++SYG L+ + G+ D+AL+L +EM+ K + +TVTY ++ L + G E+
Sbjct: 484 YFI--DEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +E+ + G+ D YN I + Y GD E+ + ++M + KPD + N L+
Sbjct: 542 AISKLNELLESGLLPDETTYNT-ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C M+++A K++ G + + T+ T I LC G D A+ + E
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNVLR 378
PD T ++ L +I+EA+ + + +K P VL+
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQ 701
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ Y + G D A T +M+E G +++N L+ ++ + DE+ +K
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK- 447
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ D ++ +L++ C ++A +LL+ +G + V+Y T++ +K GN + A
Sbjct: 448 NMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRA 507
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+LW EM++K + YN I G E+ ++E+ ++GL PD +YN ++
Sbjct: 508 LKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHG 567
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ +++A + + + EN P+ T + LC G +KA K+F V K D
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAID 627
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L+ L K+ ++ +A ++ +++K
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 138/300 (46%), Gaps = 35/300 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
LI G + A + D+M+ L V+S+N L+ C + L +E+ +K
Sbjct: 319 LINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKG 378
Query: 162 -------YNL--------------------------SPDKISYGLLLKSHCDSGSSDKAL 188
+N+ SPD ++Y L+ +C +G+ +A
Sbjct: 379 VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
++EM K +++ +VT T+L L ++ EEA +L S K+G +D +Y I
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGY 498
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ G+ +R +L DEM++ + P T++YN ++ C+ ++A L E+G P+
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TT+ T ++ C G+ +KA++ + V PD T +L+ GL + +++A + T
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNT 618
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 47/324 (14%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R L + K+ + L+ S + E LI Y + G D A++ +D+M E
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519
Query: 129 PRSVISFNAL---LFACTR-----SRLYDKVP--ILFDE---------------IPKKY- 162
S +++N + L C + S+L + + +L DE + K +
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579
Query: 163 --------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
+ PD + +LL+ C G +KAL+L N +KG + TVTY T++ L
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
K+G ++A L SEME+K + D YN IT T G +E + +M + G P +
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQV 699
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+D + V ++ + WI LC G + A ++F ES
Sbjct: 700 L------------QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGES 747
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKK 357
D +T L++GL+K++K
Sbjct: 748 KQKGITVDKSTYINLMDGLIKRRK 771
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 116 AMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ FD+M + G P +I L C +++D LF ++ + + D I+Y +L
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQR-LFSKM-RASGCNRDLITYNVL 274
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L C SG D A LL + G + + Y ++N L++ EEA + +M ++ +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV Y + I + G L+ EM + GL+PDTI YN L+ +C +DEA+
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + ++ C PN T+ I +C +G +KA +FKE + +P T L+ GL
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Query: 354 KKKKIKEAK 362
K +++EA+
Sbjct: 455 KANRLEEAR 463
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 20/293 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+IR Q G A+ +M E G I +NAL+ D+ L EI K+
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI-SKH 402
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y +L+ C +G +KA + EME G + VT+ +++N L K EEA
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 223 ERLWSEME-----------KKGVD--LDVAAYNVRITNTY-GGDPERLKELIDEMRDAGL 268
L+ +ME +G D D+A+ V + G + +L+ ++ D+G+
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PD +YN L+ +CK ++ A K+++ ++ G P++ T+ T I L +G + A +
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALE 582
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
+F++ V +P+ +T K ++ ++ I A V + F R W+
Sbjct: 583 IFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDF-----RGWE 630
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 142/293 (48%), Gaps = 8/293 (2%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
+PY +I + G + A+ +M+E V+ +NA++ + + LF
Sbjct: 41 HQPY-GTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLF 99
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
E+ K + PD I+Y ++ S C SG A +LL +M + + VT++ ++N L K
Sbjct: 100 TEMHDK-GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDT 272
+G EAE ++ +M ++G+ YN I D RL K ++D M PD
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD--RLNDAKRMLDSMASKSCSPDV 216
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++++ L+ YCK + +D +++ + G N T+ T I+ C G+ D A +
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVLRAWKKVE 384
+ P++ T + ++ L KK++++A ++ ++K + P +++A K++
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIVQAKFKIQ 329
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
M G VT+TT++N L +G +A L M ++G Y I GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
E L+ +M + +K + YN ++ CK+ A+ ++ + + G P+ T+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
I C SG + A ++ ++ + PD T L+ LVK+ K+ EA+ + + ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 372 -FPPNV 376
FP +
Sbjct: 177 IFPTTI 182
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 8/305 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ L ++R+ D+ LI + E L Q G+ D AM +QM + G
Sbjct: 320 ALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYG 379
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +N L+++ + D L + +P SPD IS+ LK C + D A
Sbjct: 380 CRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP----CSPDVISFNAALKGLCRAERWDDA 435
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
EL+ +M + + +T+ +++ L + G A ++ +M K G D+ Y+ I
Sbjct: 436 EELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLING 495
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G E EL M KPD YN ++ C+ ++A ++ + C PN
Sbjct: 496 LSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPN 552
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF I LC G D+A +VF++ PD T L+ G ++ ++ +A+ ++
Sbjct: 553 EITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLS 612
Query: 367 TIKKK 371
T+ K
Sbjct: 613 TMSCK 617
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 155/355 (43%), Gaps = 19/355 (5%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD 80
A +I + K ++ R D ++ LD + A PVS + V + R +D
Sbjct: 112 VVACNILIKKLCAQ-RRLADAERVLDALKAAGA--ADPVS----HNTLVAGYCRDGRLAD 164
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
E L+ + Y LI Y ++G A+ M ++N +L
Sbjct: 165 AERLLAAAGLSGAANVVTYT-TLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLM 220
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+R ++ L E+ + + P+++++ +++ C +G D+A++LL+ M G
Sbjct: 221 GLCGARQWEDAEALMAEMVRNH-CPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCT 279
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
V Y+T++N +QG ++A L + M K + YN + E + +L
Sbjct: 280 PDVVIYSTLVNGFSEQGRVDDAIELLNGMLCKP---NTICYNAALKGLCIAQRWEDVGQL 336
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
I EM P+ +++ L +C C+N ++D A +V E + + GC P+A + T IY
Sbjct: 337 IVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSE 396
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
G D A K+ + FN ++GL + ++ +A+ +I + ++ P
Sbjct: 397 QGRVDDALKLLNSMPCSPDVISFNAA---LKGLCRAERWDDAEELIVQMLREDCP 448
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 8/245 (3%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ L +++R+ D E LI + E LI S Q G ++A+ F+QM + G
Sbjct: 422 ALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYG 481
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++++++L+ + L + LF +P K PD Y +LK C + + A
Sbjct: 482 CTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK----PDIFGYNAVLKGLCRAARWEDA 537
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
EL++ M K +T+ ++N L ++G + A ++ +M K G D+ YN I
Sbjct: 538 GELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALING 597
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G + + L+ M KPD +SYN + C+ E EA++V + C PN
Sbjct: 598 FSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPN 654
Query: 307 ATTFR 311
TF+
Sbjct: 655 EVTFK 659
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 122/277 (44%), Gaps = 40/277 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S+ + G D A++ + M +P VISFNA L R+ +D L ++ ++
Sbjct: 390 LIYSFSEQGRVDDALKLLNSMP--CSP-DVISFNAALKGLCRAERWDDAEELIVQMLRE- 445
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ ++++ +L+ S C +G + A+E+ +M G VTY++++N L +QG E A
Sbjct: 446 DCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESA 505
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ M K D+ YN + E ELI M P+ I++N L+
Sbjct: 506 IELFQSMPCKP---DIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINS 562
Query: 282 YCKNEMMDEAKKVYE-------------------GLEENG-------------CSPNATT 309
C+ ++D A +V+E G E G C P+A +
Sbjct: 563 LCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKPDAVS 622
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+ + + LC + + +A +V E + + P+ T K
Sbjct: 623 YNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFK 659
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G + M E G FN + A + + D+ +F+++ K+
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM-KQQ 407
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD ++YG L+ + C G D A+ N+M N+GV + +++ L E+A
Sbjct: 408 GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + EM +G+ DV +N + N G + + LID M G +P ISY L+
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGG 527
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C +DEA K + + G P+ T+ T ++ C +G D AY VF+E + P
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL ++ EAK
Sbjct: 588 VVTYSTILHGLFTTRRFSEAK 608
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 3/280 (1%)
Query: 94 ITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
++ + ++ N+I +Y + M D AM F++M + G V+++ AL+ A + D
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAV 433
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+ F+++ + ++P+ + L+ C +KA E EM N+G+ V + T+L
Sbjct: 434 LKFNQMMNE-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPD 271
L +G +A+RL ME+ G V +Y I + G + + +D M GLKPD
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+YN L+ YC+ +D+A V+ + NG +P T+ T ++ L + F +A +++
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ K + +++ GL K + EA + +++ K
Sbjct: 613 NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 167/401 (41%), Gaps = 59/401 (14%)
Query: 29 SKAKSKLRSEFDPDKALDIYSSVSKHYASPVSS-RYAQDLTVRRLAKSKRFSDIET-LIE 86
S+A+S D AL ++ + H A P S + LT +R S E+ L+
Sbjct: 21 SRARS---GSLGLDDALKLFDGLLTH-ARPASVIAFNHLLTAVSRVSGRRSSTTESELVV 76
Query: 87 SHKN------DPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
S N K+T +P C LI + + G +H TF + + G + I N
Sbjct: 77 SLFNRMIRECTIKVTPDP--CTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQ 134
Query: 138 LLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN---- 192
LL C RL + + IL +P+ +PD +SY LLK C+ +++ALELL+
Sbjct: 135 LLKGLCDAKRLCEAMDILVKRMPE-LGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMAD 193
Query: 193 ----------------------------------EMENKGVEVTTVTYTTVLNCLYKQGN 218
EM ++G++ VTYTTV++ L K
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQV 253
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
+ AE ++ +M KGV D YN I G + + +++EM GLKPD +Y
Sbjct: 254 VDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGS 313
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ C N EA+ +++ + G PN + I+ G + + + V
Sbjct: 314 LLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD + ++ KK I EA + +K++ P+V+
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVV 414
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 165/401 (41%), Gaps = 44/401 (10%)
Query: 16 AAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS 75
+ G S + +S + + +E DKA +++ + P Y + L K+
Sbjct: 194 SQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTT--VIDGLCKA 251
Query: 76 KRFSDIETLIESHKN-DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+ E + + + K + Y C LI Y G + +R ++M G +
Sbjct: 252 QVVDRAEGVFQQMIDKGVKPDNDTYNC-LIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYT 310
Query: 135 FNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS---------- 183
+ +LL + C R + LFD + +K + P+ YG+L+ + G+
Sbjct: 311 YGSLLNYLCNNGRCRE-ARFLFDSMIRK-GIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Query: 184 -------------------------SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
D+A+ + N+M+ +G+ V Y +++ L K G
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
++A +++M +GV ++ +N + D E+ KE EM + G++PD + +N
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C + +A+++ + +E G P ++ T I C G D+A K + V
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD T L+ G + +I +A GV R ++ P V+
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVV 589
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 6/331 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ I++ + + SP Y + L K R D N+
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNYGA--LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L+ ++ A + +M G V+ FN +L CT+ ++ K L D + +
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM-KAQRLID-LME 510
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P ISY L+ HC G D+A + L+ M + G++ TY T+L+ + G +
Sbjct: 511 RVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
+A ++ EM + G+ V Y+ + + KEL M +G + + YN ++
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIIL 630
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
KN +DEA K+++ L TTF I L SG + A +F +
Sbjct: 631 NGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLV 690
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T L+ E L+++ ++E + ++K
Sbjct: 691 PDVFTYCLIAENLIEEGYLEEFDDLFSAMEK 721
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 119/296 (40%), Gaps = 45/296 (15%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
TV + K+K F E L + + D + LCNL G A R D M+ +G
Sbjct: 460 TVDKWEKAKEFY-FEMLNQGIRPDV-VFFNTILCNLC----TKGQVMKAQRLIDLMERVG 513
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
T VIS+ L+ C R+ + L ++ L PD+ +Y LL +C +G D
Sbjct: 514 TRPGVISYTTLIGGHCLVGRIDEAAKSL--DVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLY-------------------KQGN--------- 218
A + EM G+ VTY+T+L+ L+ KQ N
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 219 -------AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
+EA +L+ + K L++ +N+ I + G E L + GL P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
D +Y + + ++E ++ +E++G +PN+ + L G+ +A
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 6/221 (2%)
Query: 156 DEIPKKY---NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+E+ KK+ L+P + + ++ +C G +KA + +ME G+ VTY +++
Sbjct: 377 EEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKK 436
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKP 270
+ N EEAE+ +M +KGV +V YN I + YG +R ++++EM GLKP
Sbjct: 437 FCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLI-DGYGRSCLFDRCFQILEEMEKKGLKP 495
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ ISY L+ C CK+ + EA+ + + G PNA + I C +G A++ F
Sbjct: 496 NVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFF 555
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
E V +P T +L+ GL KK K+ EA+ + I +K
Sbjct: 556 DEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK 596
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 148/302 (49%), Gaps = 11/302 (3%)
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCN------LIRSYGQAGMFDHAMRTFDQMDELGTP 129
K+F +++ + E+ K K+ ++ L N LI YG++ +FD + ++M++ G
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494
Query: 130 RSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+VIS+ L+ C + + + IL D + + + P+ Y +L+ C +G A
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMVHR--GVVPNAQIYNMLIDGSCIAGKLKDAF 552
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
+EM + + T VTY ++N L K+G EAE L SE+ +KG+ DV YN I+
Sbjct: 553 RFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGY 612
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ G+ ++ EL + M+ +G+KP +Y+ L+ C E + +K+Y+ + + P+
Sbjct: 613 SSAGNVQKALELYETMKKSGIKPTLNTYHRLIA-GCGKEGLVLVEKIYQEMLQMNLVPDR 671
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ I+ G+ KA + PD T L+ G K+ ++ + K ++
Sbjct: 672 VIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVND 731
Query: 368 IK 369
+K
Sbjct: 732 MK 733
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 38/339 (11%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D +A+++ + + + SP + ++ + L K KR D E L + +
Sbjct: 197 DLKRAIELMTCMKRGGVSP--GVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRIT 254
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI Y + G + A ++M ++I+FN+LL R+++ ++ + +E+
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM- 313
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ Y PD+ +Y L H G+ D ++ L E KGV++ T + +LN L K+GN
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E+AE E++ + + GL P + +N ++
Sbjct: 374 EKAE----------------------------------EVLKKFLENGLAPVGVFFNTIV 399
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC+ +++A E +E G PN T+ + + C N ++A K K+ V +
Sbjct: 400 NGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T L++G + ++ ++KK PNV+
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVI 498
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 7/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y Q G + A T ++M+ +G + +++N+L+ + ++ ++ +K
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK- 456
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y L+ + S D+ ++L EME KG++ ++Y ++NCL K N EA
Sbjct: 457 GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEA 516
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E + +M +GV + YN+ I + G + DEM + P ++YN L+
Sbjct: 517 EVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILING 576
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + EA+ + + G S + T+ + I +GN KA ++++ P
Sbjct: 577 LCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPT 636
Query: 342 FNTVKLLV-----EGLVKKKKI 358
NT L+ EGLV +KI
Sbjct: 637 LNTYHRLIAGCGKEGLVLVEKI 658
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 10/232 (4%)
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
TP + + LL C+ S++ + L+ + KK + P S L L+S + +
Sbjct: 108 TPMKPLFSDMLLSICSESKMVSESAELY-MLMKKDGVLPSVASLNLFLESLVSTKRYEDT 166
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L+L +E+ G+ Y + K G+ + A L + M++ GV V YNV I
Sbjct: 167 LQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVI-- 224
Query: 248 TYGG--DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
GG +R+K+ L DEM D + P+ I+YN L+ YCK ++EA + E ++
Sbjct: 225 --GGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
P TF + + LC + ++A +V +E + +PD T L +G +K
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLK 334
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 3/260 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI AG A R FD+M +++++N L+ + + L EI +K
Sbjct: 538 LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK- 596
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LS D I+Y L+ + +G+ KALEL M+ G++ T TY ++ K+G
Sbjct: 597 GLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-V 655
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+++ EM + + D YN I GD ++ L M G++PD ++YN L+
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ K M + K + ++ G P T+ I C +FD AY ++E P
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+ L+ GL ++ + +A
Sbjct: 776 VSICDNLITGLREEGRSHDA 795
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 11/234 (4%)
Query: 144 RSRLYDKVPILFDEIPKKYNL-----SPDKISYGLLLKSHC-DSGSSDKALELLNEMENK 197
RS L K P F Y L +P K + +L S C +S ++ EL M+
Sbjct: 84 RSMLLPKSP--FSSPSHLYTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKD 141
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERL 256
GV + + L L E+ +L+SE+ + G+ D Y I GD +R
Sbjct: 142 GVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRA 201
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
EL+ M+ G+ P YN ++ CK + M +A+K+++ + + +PN T+ T I
Sbjct: 202 IELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDG 261
Query: 317 LCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
C G ++A+ + +E + V + P T L+ GL + + ++EA+ V+ ++
Sbjct: 262 YCKVGQLEEAFNI-RERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK- 160
+LI Y AG A+ ++ M + G ++ +++ L+ C + L +L ++I +
Sbjct: 607 SLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGL-----VLVEKIYQE 661
Query: 161 --KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ NL PD++ Y L+ + + G KA L + ME +G++ +TY ++ +K+G
Sbjct: 662 MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ + L +++M+ GL P T +Y+ L
Sbjct: 722 MHKVKNL----------------------------------VNDMKIRGLIPKTETYDIL 747
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+ +CK + D A Y + ENG +P+ + I L
Sbjct: 748 IVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGL 786
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 166/363 (45%), Gaps = 48/363 (13%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D A++++ ++ + P + + ++ + L K KR D E L +
Sbjct: 81 DLKLAMELFETMKRRKVVP--NVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVT 138
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LI Y +AG D A+ ++M + S+I+FN+LL ++R ++ + +EI
Sbjct: 139 FNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI- 197
Query: 160 KKYNLSPDKISYGL----LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
K PD +Y + LLKS +G+ AL+L E KGV++ T + +LN L K
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGA---ALDLYREAIGKGVKIDNYTCSILLNGLCK 254
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTI 273
+G E+AE + + + G+ YN I N Y GD +R I++M GL+P+ I
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNT-IVNGYCQIGDMDRAILTIEQMESRGLRPNCI 313
Query: 274 SYNFLMTCYCKNEMMDEAK-----------------------------------KVYEGL 298
++N ++ +C+ +M+D+A+ ++ E +
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
EENG PN ++ + I LC G +A V ++ V +P+ N +L++G K+
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433
Query: 359 KEA 361
+EA
Sbjct: 434 REA 436
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI YG+ +F + ++M+E G +VIS+ +L+ C ++ + +L D + +
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGR- 411
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ Y +L+ C G +AL +EM G+ T VTY +++ L K G +E
Sbjct: 412 -GVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKE 470
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE ++ + G DV YN I+ + G+ ++ EL + M+ GLKP +++ L++
Sbjct: 471 AEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLIS 530
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E + + ++ + + SP+ + I+ +G+ KA+ + KE V + P
Sbjct: 531 -GCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRP 589
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T L+ G +K+ K+ E K ++ +K K
Sbjct: 590 DNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 152/330 (46%), Gaps = 9/330 (2%)
Query: 35 LRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPK 93
L+S+ ALD+Y ++ K Y + + L K + E +++S
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKI---DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+ E ++ Y Q G D A+ T +QM+ G + I+FN+++ ++ DK
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEE 333
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
++ K ++P +Y +L+ + + ++L EME G + ++Y +++NCL
Sbjct: 334 WVKKMVGK-GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCL 392
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI--TNTYGGDPERLKELIDEMRDAGLKPD 271
K G EAE + +M +GV + YN+ I + T G E L+ DEM G+
Sbjct: 393 CKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALR-FFDEMSKNGIGAT 451
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L+ CK + EA++++ + G P+ T+ + I +GN K ++++
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYE 511
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKK-KIKE 360
+ P NT L+ G K+ K+KE
Sbjct: 512 TMKKLGLKPTINTFHPLISGCSKEGIKLKE 541
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 7/265 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI G A+R FD+M + G +++++N+L+ C +L + + F +
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFF--LITS 480
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD I+Y L+ + ++G+S K LEL M+ G++ T T+ +++ K+G +
Sbjct: 481 TGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKL 539
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
E L++EM + + D YN I + Y G ++ L EM D G++PD +YN L+
Sbjct: 540 KETLFNEMLQMNLSPDRVVYNAMI-HCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLI 598
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K + E K + + ++ G P A T+ I C +F+ AY ++E + +
Sbjct: 599 LGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFL 658
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ L GL K +++EA+ +
Sbjct: 659 PNVCICNELSTGLRKDGRLQEAQSI 683
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 3/204 (1%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ L P ++ Y ++ +C G D+A+ + +ME++G+ + + +V++ + +
Sbjct: 270 EHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMID 329
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
+AE +M KG+ V YN+ I + YG R ++++EM + G KP+ ISY L
Sbjct: 330 KAEEWVKKMVGKGIAPSVETYNILI-DGYGRLCVFSRCFQILEEMEENGEKPNVISYGSL 388
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C CK+ + EA+ V + G PNA + I C G +A + F E
Sbjct: 389 INCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAK 362
T L++GL K K+KEA+
Sbjct: 449 GATIVTYNSLIKGLCKMGKLKEAE 472
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG---LLLKSHCDSGSSDKALELLNEM 194
LL C+ S+++ +V L+D + ++ L S+G ++++S +S D L+L EM
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLP----SFGYVRMIVESLVESKKFDNVLDLFKEM 57
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--D 252
G + Y + K G+ + A L+ M+++ V +V YNV I GG
Sbjct: 58 VGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLI----GGLCK 113
Query: 253 PERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+R+++ L EM L P+ +++N L+ YCK +D A + E +++ P+ T
Sbjct: 114 EKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIIT 173
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
F + + LC + ++A + E +PD T ++ +GL+K
Sbjct: 174 FNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLK 218
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+L EM G +PD + Y M K + A +++E ++ PN + I L
Sbjct: 52 DLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGL 111
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
C A K+F E + + +P+ T L++G K ++ A G+ +KK K P++
Sbjct: 112 CKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSI 171
Query: 377 L 377
+
Sbjct: 172 I 172
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y + G A +M ++G ++N+L+ + + L D++ K
Sbjct: 562 MIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK- 620
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y LL++ HCD + A EM G + L K G +EA
Sbjct: 621 GLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEA 680
Query: 223 ERLWSEMEKKGVD 235
+ + SEM G+D
Sbjct: 681 QSICSEMIANGMD 693
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ + L K R S +L+ +ND +LI +Y G + A+ F +++E
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 127 GTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS-S 184
G ++I++N +L + + + K+ L D + K ++PD +Y L+ S C GS
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM-KSSGVAPDLYTYNTLISS-CRRGSLY 307
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
++A E+ EM+ G VTY +L+ K EA + EME G + YN
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 245 ITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I+ Y D + EL +M G+KPD +Y L++ + K D A KV+E + G
Sbjct: 368 IS-AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C PN TF I GNF + KVF+E + +PD T L+ + E
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 363 GVIRTIKK 370
GV + +K+
Sbjct: 487 GVFKEMKR 494
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 142/314 (45%), Gaps = 41/314 (13%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ YG+ GM + D M G + ++N L+ +C R LY++ +F+E+ K
Sbjct: 261 ILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEM-KA 319
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPDK++Y LL + S +A+E+L EME G + VTY ++++ + G +E
Sbjct: 320 AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDE 379
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKP--------- 270
A L S+M KKG+ DV Y ++ G D +K + +EMR AG +P
Sbjct: 380 AMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMK-VFEEMRVAGCQPNICTFNALI 438
Query: 271 --------------------------DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
D +++N L+ + +N M E V++ ++ G
Sbjct: 439 KMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 498
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P TF T I G FD+A +++ + PD +T ++ L + ++++ V
Sbjct: 499 PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKV 558
Query: 365 IRTIKK-KFPPNVL 377
+ +K + PN L
Sbjct: 559 LAEMKDGRCKPNEL 572
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 142/331 (42%), Gaps = 37/331 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K + + LI +Y + G FD AM + +M + G + ++NA+
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R L+++ + E+ K P++++Y LL ++ + ++ L E+ +
Sbjct: 543 LAALARGGLWEQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT------------ 246
+E V T++ K E ER + E+ ++G D+ N ++
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 247 ---------------NTYGG---------DPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
TY E+ ++++ E+ G+KPD IS+N ++ Y
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+N M EA +++ +++ G +P+ T+ T+I F +A V K + P+
Sbjct: 722 CRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQ 781
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
NT L++ K + EA I ++ P
Sbjct: 782 NTYNSLIDWFCKLNRRDEANSFISNLRNLDP 812
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +Y + G+ D AM QM + G V ++ LL ++ D +F+E+ +
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM-RV 424
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++ L+K H + G+ + +++ E++ VT+ T+L + G E
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSE 484
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ EM++ G + +N I+ + G ++ + M DAG+ PD +YN ++
Sbjct: 485 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLA 544
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ + ++++KV +++ C PN T+ + ++
Sbjct: 545 ALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLH 579
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 14/235 (5%)
Query: 154 LFDEIPKKYNLSPDKISYGLL--LKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTT 208
LF+ N + D +S+ +L +K ++ AL + + N+ ++
Sbjct: 131 LFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAV 190
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRD 265
+++ L K+G A A L ++ GV +D+ AY IT Y + R +E + ++ +
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLIT-AYASNG-RYREAVMVFKKLEE 248
Query: 266 AGLKPDTISYNFLMTCYCKNEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN-F 323
G +P I+YN ++ Y K M + + + ++ +G +P+ T+ T I C G+ +
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISS-CRRGSLY 307
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
++A +VF+E PD T L++ K ++ +EA V++ ++ F P+++
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIV 362
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 24/330 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ ++ + P + Y ++ ++ L ++R+ D E L+
Sbjct: 44 DDAIEFLKNLPSYGCEPNTVSY--NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 101
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G+ + A+ +Q+ + G + +S+N LL A + + DK D + +
Sbjct: 102 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 161
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD +SY LL + C SG D A+ELL+++++KG ++Y TV++ L K G +E
Sbjct: 162 -GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 220
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFL 278
A L +EM KG+ D+ Y+ D R+++ I +++D G++P+T+ YN +
Sbjct: 221 ALELLNEMVSKGLQPDIITYSTIAAGLCRED--RIEDAIRAFGKVQDMGIRPNTVLYNAI 278
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK A ++ + NGC PN +T+ I L G +A + E
Sbjct: 279 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE------ 332
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
L G+V+K I KG IR +
Sbjct: 333 --------LCSRGVVRKSLIN--KGAIRLL 352
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 10/241 (4%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C RS Y + L DE+ K +PD ++Y +++ C G D A+E L + + G E
Sbjct: 3 CKRSG-YKQAMKLLDEMRDK-GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
TV+Y VL L E+AE L EM +KG +V +N+ I+ G E E++
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+++ G P+++SYN L+ +CK + MD+A + + GC P+ ++ T + LC S
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 321 GNFDKAYKV---FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
G D A ++ K+ + +NTV ++GL K K KEA ++ + K P++
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTV---IDGLTKAGKTKEALELLNEMVSKGLQPDI 237
Query: 377 L 377
+
Sbjct: 238 I 238
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 138/282 (48%), Gaps = 22/282 (7%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
+ AM+ D+M + G ++++N ++ C R+ D + L +P Y P+ +SY
Sbjct: 8 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL-KNLP-SYGCEPNTVSY 65
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
++LK C + + A EL+ EM KG VT+ +++ L ++G E A + ++ K
Sbjct: 66 NIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 125
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKEL--IDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
G + +YN + + + + K + +D M G PD +SYN L+T C++ +D
Sbjct: 126 YGCTPNSLSYN-PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 184
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
A ++ L++ GC+P ++ T I L +G +A ++ E V PD T +
Sbjct: 185 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 244
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVP 391
GL ++ +I++A +RA+ KV +++G+ P
Sbjct: 245 AGLCREDRIEDA---------------IRAFGKV-QDMGIRP 270
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
+ C +A++LL+EM +KG VTY V+N + ++G ++A + G +
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 237 DVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ +YN+ + + E +EL+ EM G P+ +++N L++ C+ +++ A +V
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
E + + GC+PN+ ++ ++ C DKA V PD + L+ L +
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180
Query: 356 KKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
++ A ++ +K K VL ++ V + L
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 212
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 28/315 (8%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
IE N Q+ Y +LIRSYG AG+F +++ F M ++G SV++FN+LL +
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG------ 198
LFDE+ + Y ++PD ++ L+ C + D+A + +ME G
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAH 245
Query: 199 ------------VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
V V+YTT++ + +EA ++ +M +G+ + YN I
Sbjct: 246 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIK 305
Query: 247 N-TYGGDPERLKELIDEMRDA--GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ + +K+++ DA PD ++N L+ +C +D A KV++ +
Sbjct: 306 GLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKL 365
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKE----SVMVHK---IPDFNTVKLLVEGLVKKK 356
P++ ++ I LC FD+A +F E V++ K P + E L
Sbjct: 366 HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG 425
Query: 357 KIKEAKGVIRTIKKK 371
K K+A+ V R + K+
Sbjct: 426 KTKQAEKVFRQLMKR 440
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP-ILFDEIPKK 161
L+R Y D A+ F M G + +++N L+ + + YD++ IL
Sbjct: 268 LVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAF 327
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD ++ +L+K+HCD+G D A+++ EM N + + +Y+ ++ L + +
Sbjct: 328 TTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDR 387
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
AE L++E+ +K V L G D KP +YN +
Sbjct: 388 AETLFNELFEKEVLL-------------GKDE--------------CKPLAAAYNPMFEY 420
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N +A+KV+ L + G + +++T I C G F AY++ + +PD
Sbjct: 421 LCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPD 479
Query: 342 FNTVKLLVEGLVK 354
T +LL++GL+K
Sbjct: 480 LETYELLIDGLLK 492
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 7/293 (2%)
Query: 80 DIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
D+ L S + + + LI +YG+ GM D AM F QM E G ++ ++
Sbjct: 385 DMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444
Query: 140 FACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
A +R RL D + I L PD I Y L++ C G+ KA EL++EM ++G
Sbjct: 445 AAFSRMGRLADAMDKFNQMIA--MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502
Query: 199 V-EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPER 255
+ TV + +++N L K+G EA+ ++ + G DV +N I + YG G E+
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI-DGYGLVGKMEK 561
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
++D M G++PD ++Y+ L+ YC+N +D+ ++ + G P T+ ++
Sbjct: 562 AFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILH 621
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
L G A K+ E + D +T +++ GL + EA + + +
Sbjct: 622 GLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 2/273 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G A F +M + G V+++++ + A ++R DK ++ ++
Sbjct: 233 VIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN- 291
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PDK++Y ++ + G + + EM +G+ T + ++ L K G ++EA
Sbjct: 292 GFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEA 351
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M KG D+ Y+V + G + L + M G+ D YN L+
Sbjct: 352 AEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDA 411
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K MMDEA ++ ++E G P+A T+ T I G A F + + + PD
Sbjct: 412 YGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPD 471
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
L++G + +AK +I + + P
Sbjct: 472 TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 120 FDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
F + + G VI N LL C R D V +L +P+ + PD ISY +LKS
Sbjct: 142 FGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPE-LGVEPDTISYSTVLKSL 200
Query: 179 CDSGSSDKALELLNEMENK--GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
C+ S +AL+LL+ M K G V+Y TV++ +++G +A L+ EM ++GV
Sbjct: 201 CEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVP 260
Query: 237 DVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
DV Y+ I EL+ +M G +PD ++YN ++ Y E ++
Sbjct: 261 DVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMF 320
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ G P+ T +++ LC G +A + F PD T +L+ G
Sbjct: 321 REMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHG 376
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 5/235 (2%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE- 189
+V ++N L+ C R+ LF K L D I +LLK C + SD A+
Sbjct: 118 TVCTYNILMDCCCRAHRPTVGFALFGRFLKT-GLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK--GVDLDVAAYNVRITN 247
LL+ M GVE T++Y+TVL L + ++ A L M KK G +V +YN I
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G+ + L EM G+ PD ++Y+ + CK MD+A+ V + NG P+
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ I+ G + + +F+E +PD T + L K K KEA
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEA 351
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+ ++I S + G A FD + +G VI+FN+L+ +K + D +
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ PD ++Y LL +C +G D L L EM +KGV+ TT+TY +L+ L+ G
Sbjct: 570 IS-VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 219 AEEAERLWSEMEKKGVDLDVAA------------------------------YNVRITNT 248
A+++ EM + G +D++ +N+ I NT
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINT 688
Query: 249 YGG------DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
E EL D + GL P+ +Y ++T K ++EA ++ +E++G
Sbjct: 689 MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748
Query: 303 CSPNATTFRTWIYHLCGSGNFDKA 326
C+P++ I L G KA
Sbjct: 749 CAPSSRLLNNIIRVLLEKGEISKA 772
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 4/276 (1%)
Query: 99 YLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+ CN + S + G A FD M G +++++ LL + LF+
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + D Y +L+ ++ G D+A+ + +M+ +GV TY TV+ + G
Sbjct: 393 MEGN-GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL-KPDTISY 275
+A +++M G+ D YN I G+ + KELI EM G+ +P+T+ +
Sbjct: 452 RLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFF 511
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ CK + EA+ +++ + G P+ TF + I G +KA+ V +
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMIS 571
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V PD T L++G + +I + + R + K
Sbjct: 572 VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK 607
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 115/266 (43%), Gaps = 9/266 (3%)
Query: 115 HAMRTFD-------QMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSP 166
HA R+ D +M ELG IS++ +L + C SR + +L + K SP
Sbjct: 166 HAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSP 225
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ +SY ++ G KA L +EM +GV VTY++ ++ L K ++AE +
Sbjct: 226 NVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVL 285
Query: 227 SEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
+M G + D YN I + G + + EM GL PD + N M+ CK+
Sbjct: 286 RQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKH 345
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
EA + ++ + G P+ T+ ++ G +F + D +
Sbjct: 346 GKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVY 405
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK 371
+L++ K+ + EA + ++++
Sbjct: 406 NILIDAYGKRGMMDEAMLIFTQMQER 431
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 134/262 (51%), Gaps = 2/262 (0%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
G+A F + DQM + G +V+++N L+ + R+ + +F+E+ ++ PD
Sbjct: 391 GRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEM-QRVGCEPD 449
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+++Y L+ H +G D ALE+ M+ G+ T TY+ ++NCL K G+ A +L+
Sbjct: 450 RVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFC 509
Query: 228 EMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
EM ++G ++ YN+ I + + +L +M+ AG +PD ++Y+ +M
Sbjct: 510 EMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCG 569
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+DEA+ V+ ++ P+ + + +GN +KA++ ++ + P+ T
Sbjct: 570 YLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCN 629
Query: 347 LLVEGLVKKKKIKEAKGVIRTI 368
L+ ++ K+ +A +++++
Sbjct: 630 SLLSAFLRVHKLADAYNLLQSM 651
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+LL++M G + VTY +++ + +A +++EM++ G + D Y I +
Sbjct: 401 KLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIH 460
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G + E+ M+ AGL PDT +Y+ ++ C K + A K++ + E GC PN
Sbjct: 461 AKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNL 520
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I + N+ A K++++ PD T +++E L + EA+ V
Sbjct: 521 VTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSE 580
Query: 368 IKKK 371
+K+K
Sbjct: 581 MKRK 584
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID--- 261
TYTT++ L + +L +M K G +V YN R+ ++Y G L + +D
Sbjct: 382 TYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYN-RLIHSY-GRANYLNDAVDVFN 439
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
EM+ G +PD ++Y L+ + K +D A ++Y+ ++ G SP+ T+ I L +G
Sbjct: 440 EMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAG 499
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAW 380
+ A+K+F E V +P+ T +++ K + + A + R ++ F P+ + +
Sbjct: 500 HLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKV-TY 558
Query: 381 KKVEEELG 388
V E LG
Sbjct: 559 SIVMEVLG 566
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 16/187 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+AG A + F +M E G +++++N ++ ++R Y L+ ++ +
Sbjct: 491 IINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDM-QSA 549
Query: 163 NLSPDKISYGLLLK--SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PDK++Y ++++ HC G D+A + +EM+ K Y +++ K GN E
Sbjct: 550 GFQPDKVTYSIVMEVLGHC--GYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVE 607
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID------EMRDAGLKPDTIS 274
+A + + M G+ +V N ++ R+ +L D M + GL P +
Sbjct: 608 KAWQWYQTMLNTGLRPNVPTCNSLLSAFL-----RVHKLADAYNLLQSMLELGLNPSLQT 662
Query: 275 YNFLMTC 281
Y L++C
Sbjct: 663 YTLLLSC 669
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL++Y + SP + Y+ + + L K+ L +HK ++ ++ +
Sbjct: 467 DFALEMYQRMQAAGLSPDTFTYS--VIINCLGKAGH------LAAAHKLFCEMVEQGCVP 518
Query: 102 NL------IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
NL I +A + A++ + M G ++++ ++ D+ +F
Sbjct: 519 NLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVF 578
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
E+ +K N PD+ YGLL+ +G+ +KA + M N G+ T ++L+ +
Sbjct: 579 SEMKRK-NWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLR 637
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
+A L M + G++ + Y + ++
Sbjct: 638 VHKLADAYNLLQSMLELGLNPSLQTYTLLLS 668
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 139/284 (48%), Gaps = 7/284 (2%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y A+ DQM E+G I+F L+
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + ++ P+ ++YG+++ C G +D AL LLN+ME +E V + T+
Sbjct: 208 EAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYGGDPERLKELIDEMRDAG 267
++ L K + ++A L+ EME KG+ +V Y+ I+ +YG + +L+ +M +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA-SQLLSDMIEKK 325
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
+ P+ +++N L+ + K EA+K+Y+ + + P+ T+ + + C DKA
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++F+ V PD T L++G K K++++ + R + +
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 2/258 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ ++M+ V+ FN ++ + + R D LF E+ K + P+ ++Y
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSS 300
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A +LL++M K + VT+ +++ K+G EAE+L+ +M K+
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 234 VDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+D D+ YN + D ++ K++ + M PD ++YN L+ +CK++ +++
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+++ + G + T+ T I L G+ D A KVFK+ V PD T +L++GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 353 VKKKKIKEAKGVIRTIKK 370
K+++A V ++K
Sbjct: 481 CNNGKLEKALEVFDYMQK 498
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 8/331 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL+++ + P Y+ ++ L R+SD L+ S + KI
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISC--LCSYGRWSDASQLL-SDMIEKKINPNLVTF 333
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI ++ + G F A + +D M + + ++N+L+ C RL DK +F+ +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL-DKAKQMFEFMV 392
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + PD ++Y L+K C S + EL EM ++G+ TVTYTT++ L+ G+
Sbjct: 393 SK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 451
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A++++ +M GV D+ Y++ + G E+ E+ D M+ + +K D Y +
Sbjct: 452 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +D+ ++ L G PN T+ T I LC +AY + K+
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+P+ T L+ ++ + +IR ++
Sbjct: 572 LPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 69 VRRLAKSKRFSDIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ L K + D L +E+ P + L + + SYG+ + A + M E
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIE 323
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
++++FNAL+ A + + + L+D++ K+ ++ PD +Y L+ C D
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRLD 382
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
KA ++ M +K VTY T++ K E+ L+ EM +G+ D Y I
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 246 TNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ GD + +++ +M G+ PD ++Y+ L+ C N +++A +V++ ++++
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ + T I +C +G D + +F + P+ T ++ GL K+ ++EA +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 365 IRTIKKKFP-PN 375
++ +K+ P PN
Sbjct: 563 LKKMKEDGPLPN 574
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M L + ++N L+ C RS++ + +L +
Sbjct: 91 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P ++ LL +C A+ L+++M G T+T+TT+++ L+ A E
Sbjct: 151 Y--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M ++G ++ Y V + GD + L+++M A ++ D + +N ++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D+A +++ +E G PN T+ + I LC G + A ++ + + P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K EA+ + IK+ P++
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 2/214 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + + LL + D + L +M+ + TY ++NC ++ A L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M K G + + + + +G L+D+M + G +PDTI++ L+
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ EA + + + + GC PN T+ + LC G+ D A + + D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+++ L K + + +A + + ++ K PNV+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 166/379 (43%), Gaps = 51/379 (13%)
Query: 40 DPDKALDIYSSVSKHYA---SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
D KAL ++ +S H + P S +A D++ R L S + + S + P T
Sbjct: 80 DGPKALQFFNLLSHHPSYSHHPSSYDHAIDISAR-LRDSPSLRSLVYRMRSARLGP--TP 136
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
+ + + Y AG A++ F M + G + + SFN +L +S+ + LF
Sbjct: 137 KTFAI-IAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFK 195
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
K+ D +SY +++ C ++KALE+L EM +G+ +Y T+L ++
Sbjct: 196 VFKGKFR--ADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRA 253
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTIS 274
G EA + EM+K+ ++DV Y + + +G G+ +R +++ D M G+ P +
Sbjct: 254 GQINEAWDFFLEMKKRDCEIDVITYTT-VIHGFGVAGEIKRARKVFDTMVKKGVLPSVAT 312
Query: 275 YNFLMTCYCKNEMMDEAKKVYE-------------------GL----------------E 299
YN + CK + +D A ++E GL +
Sbjct: 313 YNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMK 372
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK-- 357
++GC PN T+ I + C G DKA +F++ +P+ +T +L+ + +KK
Sbjct: 373 DDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSD 432
Query: 358 --IKEAKGVIRTIKKKFPP 374
+ +I + + F P
Sbjct: 433 DLLVAGNLLIEMVDRGFVP 451
>gi|242088695|ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 3/283 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S G D A + +LG + +S+N +L + ++ DE+ +
Sbjct: 132 LLHSLVCNGRVDAARDMLPEAPKLGVRTNAVSYNIILKGVCHRDGFSGARVVLDEMLAR- 190
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P +++ L+ S C G A +L++EM + V VTY ++ L G ++A
Sbjct: 191 GLRPTVVTFNTLVGSACREGELAAAEQLMDEMARRSVPPNAVTYALLMQGLCDAGRYDDA 250
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++L +ME + DV Y V ++ GD ++ LI +MR L PD SYN L+ C
Sbjct: 251 KKLLFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRGLISDMRKRKLTPDDASYNVLIKC 310
Query: 282 YCKNEMMDEAKKVYEGLE-ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C +DEA + ++ ++G P+A T+R + C + +FD +VF + P
Sbjct: 311 LCDAGKVDEAHRALVEMQLKDGTVPSAATYRVLLDGCCEARDFDLGLRVFNAMLASGHCP 370
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKV 383
T + LV GL + K +EA V+ + ++ + W+ V
Sbjct: 371 LALTFRRLVRGLGEDGKAEEACFVLEQMGQRGMRLDAQGWQSV 413
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 138 LLFACTRSRLYDKVPILFDEIPK-KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+L+ R+RL+ VP L + + L P + L H + S A L+
Sbjct: 63 VLYRLARARLFPLVPPLLTALRTLRVPLQPTAFAA---LIDHLGAFSRPDAALLVFRAVP 119
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ER 255
+ T+ +L+ L G + A + E K GV + +YN+ + D
Sbjct: 120 AFCSHSNATFHALLHSLVCNGRVDAARDMLPEAPKLGVRTNAVSYNIILKGVCHRDGFSG 179
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ ++DEM GL+P +++N L+ C+ + A+++ + + PNA T+ +
Sbjct: 180 ARVVLDEMLARGLRPTVVTFNTLVGSACREGELAAAEQLMDEMARRSVPPNAVTYALLMQ 239
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LC +G +D A K+ + PD +L+ +G+I ++K+
Sbjct: 240 GLCDAGRYDDAKKLLFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRGLISDMRKR 295
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 139/284 (48%), Gaps = 7/284 (2%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y A+ DQM E+G I+F L+
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + ++ P+ ++YG+++ C G +D AL LLN+ME +E V + T+
Sbjct: 170 EAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYGGDPERLKELIDEMRDAG 267
++ L K + ++A L+ EME KG+ +V Y+ I+ +YG + +L+ +M +
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA-SQLLSDMIEKK 287
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
+ P+ +++N L+ + K EA+K+Y+ + + P+ T+ + + C DKA
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++F+ V PD T L++G K K++++ + R + +
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 391
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 140/286 (48%), Gaps = 4/286 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ ++M+ V+ FN ++ + + R D LF E+ K + P+ ++Y
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSS 262
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A +LL++M K + VT+ +++ K+G EAE+L+ +M K+
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 234 VDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+D D+ YN + D ++ K++ + M PD ++YN L+ +CK++ +++
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+++ + G + T+ T I L G+ D A KVFK+ V PD T +L++GL
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
Query: 353 VKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPAVGDG 398
K+++A V ++K + + + E G+ A V DG
Sbjct: 443 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE--GMCKAGKVDDG 486
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 8/331 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL+++ + P Y+ ++ L R+SD L+ S + KI
Sbjct: 239 DDALNLFKEMETKGIRPNVVTYSSLISC--LCSYGRWSDASQLL-SDMIEKKINPNLVTF 295
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI ++ + G F A + +D M + + ++N+L+ C RL DK +F+ +
Sbjct: 296 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL-DKAKQMFEFMV 354
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + PD ++Y L+K C S + EL EM ++G+ TVTYTT++ L+ G+
Sbjct: 355 SK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 413
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A++++ +M GV D+ Y++ + G E+ E+ D M+ + +K D Y +
Sbjct: 414 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 473
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +D+ ++ L G PN T+ T I LC +AY + K+
Sbjct: 474 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 533
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+P+ T L+ ++ + +IR ++
Sbjct: 534 LPNSGTYNTLIRAHLRDGDKAASAELIREMR 564
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 141/293 (48%), Gaps = 6/293 (2%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
+E+ P + L + + SYG+ + A + M E ++++FNAL+ A +
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVK 304
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
+ + L+D++ K+ ++ PD +Y L+ C DKA ++ M +K V
Sbjct: 305 EGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 363
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM 263
TY T++ K E+ L+ EM +G+ D Y I + GD + +++ +M
Sbjct: 364 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 423
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
G+ PD ++Y+ L+ C N +++A +V++ ++++ + + T I +C +G
Sbjct: 424 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 483
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PN 375
D + +F + P+ T ++ GL K+ ++EA +++ +K+ P PN
Sbjct: 484 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 536
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M L + ++N L+ C RS++ + +L +
Sbjct: 53 LLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLG 112
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P ++ LL +C A+ L+++M G T+T+TT+++ L+ A E
Sbjct: 113 Y--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 170
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M ++G ++ Y V + GD + L+++M A ++ D + +N ++
Sbjct: 171 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 230
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D+A +++ +E G PN T+ + I LC G + A ++ + + P
Sbjct: 231 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 290
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K EA+ + IK+ P++
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 328
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 2/214 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + + LL + D + L +M+ + TY ++NC ++ A L
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M K G + + + + +G L+D+M + G +PDTI++ L+
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ EA + + + + GC PN T+ + LC G+ D A + + D
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+++ L K + + +A + + ++ K PNV+
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 258
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ + L K R S +L+ +ND +LI +Y G + A+ F +++E
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 127 GTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS-S 184
G ++I++N +L + + + K+ L D + K ++PD +Y L+ S C GS
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSM-KSSGVAPDLYTYNTLISS-CRRGSLY 307
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
++A E+ EM+ G VTY +L+ K EA + EME G + YN
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 245 ITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I+ Y D + EL +M G+KPD +Y L++ + K D A KV+E + G
Sbjct: 368 IS-AYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C PN TF I GNF + KVF+E + +PD T L+ + E
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 363 GVIRTIKK 370
GV + +K+
Sbjct: 487 GVFKEMKR 494
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 142/314 (45%), Gaps = 41/314 (13%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ YG+ GM + D M G + ++N L+ +C R LY++ +F+E+ K
Sbjct: 261 ILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEM-KA 319
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPDK++Y LL + S +A+E+L EME G + VTY ++++ + G +E
Sbjct: 320 AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDE 379
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKP--------- 270
A L S+M KKG+ DV Y ++ G D +K + +EMR AG +P
Sbjct: 380 AMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMK-VFEEMRVAGCQPNICTFNALI 438
Query: 271 --------------------------DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
D +++N L+ + +N M E V++ ++ G
Sbjct: 439 KMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 498
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P TF T I G FD+A +++ + PD +T ++ L + ++++ V
Sbjct: 499 PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKV 558
Query: 365 IRTIKK-KFPPNVL 377
+ +K + PN L
Sbjct: 559 LAEMKDGRCKPNEL 572
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 142/331 (42%), Gaps = 37/331 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K + + LI +Y + G FD AM + +M + G + ++NA+
Sbjct: 483 SEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAV 542
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R L+++ + E+ K P++++Y LL ++ + ++ L E+ +
Sbjct: 543 LAALARGGLWEQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGI 601
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT------------ 246
+E V T++ K E ER + E+ ++G D+ N ++
Sbjct: 602 IEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTN 661
Query: 247 ---------------NTYGG---------DPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
TY E+ ++++ E+ G+KPD IS+N ++ Y
Sbjct: 662 EILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAY 721
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+N M EA +++ +++ G +P+ T+ T+I F +A V K + P+
Sbjct: 722 CRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQ 781
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
NT L++ K + EA I ++ P
Sbjct: 782 NTYNSLIDWFCKLNRRDEASSFISNLRNLDP 812
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +Y + G+ D AM QM + G V ++ LL ++ D +F+E+ +
Sbjct: 366 SLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEM-RV 424
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++ L+K H + G+ + +++ E++ VT+ T+L + G E
Sbjct: 425 AGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSE 484
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ EM++ G + +N I+ + G ++ + M DAG+ PD +YN ++
Sbjct: 485 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLA 544
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ + ++++KV +++ C PN T+ + ++
Sbjct: 545 ALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLH 579
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 14/235 (5%)
Query: 154 LFDEIPKKYNLSPDKISYGLL--LKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTT 208
LF+ N + D +S+ +L +K ++ AL + + N+ ++
Sbjct: 131 LFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVFYFVRNREDFASILSNSVVAV 190
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRD 265
+++ L K+G A A L ++ GV +D+ AY IT Y + R +E + ++ +
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLIT-AYASNG-RYREAVMVFKKLEE 248
Query: 266 AGLKPDTISYNFLMTCYCKNEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN-F 323
G +P I+YN ++ Y K M + + + ++ +G +P+ T+ T I C G+ +
Sbjct: 249 EGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISS-CRRGSLY 307
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
++A +VF+E PD T L++ K ++ +EA V++ ++ F P+++
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIV 362
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 10/293 (3%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
++ I +L+E K+D I + Y N LI + + A + F++M G +++N
Sbjct: 260 WNKITSLVEKMKSD-GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
ALL +S + + +E+ SP ++Y L+ ++ G D+A+EL N+M
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPE 254
KG + TYTT+L+ + G E A ++ EM G ++ +N I YG G
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI-KMYGNRGKFT 436
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ ++ DE+ GL PD +++N L+ + +N M E V++ ++ G P TF T I
Sbjct: 437 EMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 315 --YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
Y CGS F++A V++ + PD +T ++ L + ++++ V+
Sbjct: 497 SAYSRCGS--FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 7/308 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ + L K R S + + D +LI ++ +G + A+ F +M+E
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 127 GTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS-S 184
G ++I++N +L + ++K+ L +++ K ++PD +Y L+ + C GS
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLI-TCCKRGSLH 295
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+A ++ EM+ G VTY +L+ K +EA ++ +EM G + YN
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 245 ITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I+ Y D + EL ++M + G KPD +Y L++ + + ++ A ++E + G
Sbjct: 356 IS-AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C PN TF +I G F + K+F E + PD T L+ + E
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 363 GVIRTIKK 370
GV + +K+
Sbjct: 475 GVFKEMKR 482
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 143/332 (43%), Gaps = 39/332 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K + + LI +Y + G F+ AM + +M + G + ++N +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R ++++ + E+ + P++++Y LL ++ + L E+ +
Sbjct: 531 LAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
+E V T++ K EAER +SE++++G D+ N ++ YG
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS-IYGRRQMVAKA 648
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
D + +E++ E+ G+KPD ISYN ++
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+N M +A +++ + +G P+ T+ T+I F++A V + + P+
Sbjct: 709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
NT +V+G K + EAK + ++ P
Sbjct: 769 QNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 135/291 (46%), Gaps = 18/291 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +Y + GM D AM +QM E GT V ++ LL R+ + +F+E+ +
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM-RN 412
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++ +K + + G + +++ +E+ G+ VT+ T+L + G E
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ EM++ G + +N I+ + G E+ + M DAG+ PD +YN ++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ M ++++KV +E+ C PN T+ + ++ AY KE ++H +
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH----------AYANGKEIGLMHSL- 581
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVP 391
+ + G+++ + + V+ K P RA+ +++E G P
Sbjct: 582 ----AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSP 627
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 132/339 (38%), Gaps = 38/339 (11%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
IS ++++ R+ + ++ S H SP + + L + S + L
Sbjct: 65 ISSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELF 124
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS 145
E K+ P+ T L ++ G FD A+R FD +
Sbjct: 125 EPFKDKPESTSSELLA-FLKGLGFHKKFDLALRAFDWFMK-------------------- 163
Query: 146 RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
K Y D +++ G A + N ++ G + +
Sbjct: 164 -------------QKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYS 210
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDP-ERLKELIDE 262
YT++++ G EA ++ +ME+ G + YNV I N +G G P ++ L+++
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNV-ILNVFGKMGTPWNKITSLVEK 269
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M+ G+ PD +YN L+TC + + EA +V+E ++ G S + T+ + S
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+A KV E V+ P T L+ + + EA
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 166/363 (45%), Gaps = 13/363 (3%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKH-------YASPVSSRYAQDLTVRRLAKSKR 77
++S K L + P DI S V K ++ S Y + L+ L++ K
Sbjct: 617 TLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKL 676
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+ E K+ P + + L+ + + FD + +QM LG P + +++
Sbjct: 677 DDAVALFGEMVKSRPFPSIIEF-SKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 138 LLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ C RS+L + +L + Y P+ ++ LL +C S +A+ L+++M
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGY--EPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 793
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPER 255
G + TVT+ T+++ L+ A EA L M KG D+ Y V + GD +
Sbjct: 794 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L+++M L+P + YN ++ CK + MD+A +++ +E G PN T+ + I
Sbjct: 854 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
LC G + A ++ + + PD T L++ VK+ K+ EA+ + +K+ P
Sbjct: 914 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973
Query: 375 NVL 377
+++
Sbjct: 974 SIV 976
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + + A+ D+M E+G ++++NA++ + +++ + F EI +K
Sbjct: 263 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 322
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y L+ C+S A LL++M K + +TY+ +L+ K G E
Sbjct: 323 -GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 381
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ L+ EM + +D D+ Y+ I D + ++ D M G D +SYN L+
Sbjct: 382 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 441
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK + +++ K++ + + G N T+ T I +G+ DKA + F + P
Sbjct: 442 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 501
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T +L+ GL ++++A + ++K+
Sbjct: 502 DIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 6/287 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A ++M++ V+ +N ++ + + D LF E+ K + P+ ++Y
Sbjct: 852 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSS 910
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C+ G A LL++M + + T++ +++ K+G EAE+L+ EM K+
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 970
Query: 234 VDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+D + Y+ I D + K++ + M PD ++YN L+ +CK + ++E
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+V+ + + G N T+ I L +G+ D A ++FKE V P+ T L++GL
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090
Query: 353 VKKKKIKEAKGVIRTIKK-KFPPNVLRAWKKVEEELGLVPAPAVGDG 398
K K+++A V +++ K P + +E G+ A V DG
Sbjct: 1091 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE---GMCKAGKVEDG 1134
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 8/312 (2%)
Query: 64 AQDLTVRRLAKSKRFSDIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
A + + L K+KR +D IE P + L N + + A R
Sbjct: 295 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN---GLCNSSRWSDAARLL 351
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
M + +VI+++ALL A ++ + LF+E+ + ++ PD ++Y L+ C
Sbjct: 352 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSIDPDIVTYSSLINGLCL 410
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
D+A ++ + M +KG V+Y T++N K E+ +L+ EM ++G+ +
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 470
Query: 241 YNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YN I + GD ++ +E +M G+ PD +YN L+ C N +++A ++E ++
Sbjct: 471 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 530
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ + T+ T I +C +G ++A+ +F + PD T ++ GL K +
Sbjct: 531 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 590
Query: 360 EAKGVIRTIKKK 371
E + + +K++
Sbjct: 591 EVEALYTKMKQE 602
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 150/335 (44%), Gaps = 10/335 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL---IESHKNDPKITQ 96
D D A ++ + + + P Y + + L K K D L +E+ P +
Sbjct: 850 DTDLAFNLLNKMEQGKLEPGVLIY--NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
L + + +YG+ + A R M E V +F+AL+ A + + L+D
Sbjct: 908 YSSLISCLCNYGR---WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 964
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ K+ ++ P ++Y L+ C D+A ++ M +K VTY T++ K
Sbjct: 965 EMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 1023
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISY 275
EE ++ EM ++G+ + YN+ I + GD + +E+ EM G+ P+ ++Y
Sbjct: 1024 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 1083
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ CKN +++A V+E L+ + P T+ I +C +G + + +F +
Sbjct: 1084 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 1143
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD ++ G +K +EA + + +K+
Sbjct: 1144 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD 149
DP I L N + + + D A + FD M G V+S+N L+ C R+ D
Sbjct: 395 DPDIVTYSSLINGLCLHDR---IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 451
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ LF E+ ++ L + ++Y L++ +G DKA E ++M+ G+ TY +
Sbjct: 452 GMK-LFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGL 268
L L G E+A ++ +M+K+ +DLD+ Y I G E L + GL
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 569
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVY-----EGLEENGCS 304
KPD ++Y +M+ C ++ E + +Y EGL +N C+
Sbjct: 570 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ QAG D A F +M G P +++++N LL ++ +K ++F E ++
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRS 1109
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +Y ++++ C +G + +L + KGV+ V Y T+++ ++G+ EEA
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPD 271
+ L+ EM++ G + YN I GD E ELI EMR G D
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 118/279 (42%), Gaps = 41/279 (14%)
Query: 131 SVISFNALLFACTRSRLYDKVPIL---------------FDEIPK--------------- 160
S++ FN LL A + + YD V L F+ +
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 246
Query: 161 ----KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
K PD+++ G L+ C A+ L+++M G + V Y +++ L K
Sbjct: 247 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 306
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDT 272
+A + E+E+KG+ +V Y + ++ D R L+ +M + P+
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR---LLSDMIKKKITPNV 363
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
I+Y+ L+ + KN + EAK+++E + P+ T+ + I LC D+A ++F
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + D + L+ G K K++++ + R + ++
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + + LL + D + L +ME G+ T+ V+NC A +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMT 280
+M K G + D V I + G R + L+D+M + G KPD ++YN ++
Sbjct: 246 LGKMLKLGYEPD----RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + +++A ++ +E G PN T+ + LC S + A ++ + + P
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 361
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK K+ EAK + ++ P+++
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 399
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + + A+ D+M E+G ++++NA++ + ++R + F EI +K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK 219
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y L+ C+SG + A LL +M + + +TY+ +L+ K G E
Sbjct: 220 -GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ ++ EM + +D D+ Y+ I D + ++ D M G PD +SYN L+
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK + +++ K++ + + G N T+ T I G+ DKA + F + P
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D T +L+ GL +++A + ++K
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQK 428
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 134/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +G ++ A R M + +VI+++ALL A ++ + +F+E+ +
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR-M 289
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ PD ++Y L+ C D+A ++ + M +KG V+Y T++N K E+
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ +M ++G+ + YN I + GD ++ +E +M G+ PD +YN L+
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N ++++A ++E ++++ + T+ T I +C +G + A+ +F + PD
Sbjct: 410 LCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T ++ GL K E + + +K++
Sbjct: 470 IVTYTTMMSGLCTKGLQHEVEALYTKMKQE 499
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 7/218 (3%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD 149
DP I L N + + + D A + FD M G V+S+N L+ C R+ D
Sbjct: 292 DPDIVTYSSLINGLCLHDR---IDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVED 348
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ LF ++ ++ L + ++Y L++ G DKA E ++M++ GV TY +
Sbjct: 349 GMK-LFRKMSQR-GLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGL 268
L L G E+A ++ +M+K +DLD+ Y I G E L + GL
Sbjct: 407 LGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGL 466
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
KPD ++Y +M+ C + E + +Y +++ G N
Sbjct: 467 KPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 35/291 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYD-------------------------- 149
A+ F +M + S++ FN LL A + + YD
Sbjct: 69 AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 150 ------KVPILFDEIPKKYNLS--PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+V + + K L PD+++ G L+ C A+ L+++M G
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
V Y +++ L K +A + E+ +KG+ +V Y + G L+
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+M + P+ I+Y+ L+ + KN + EAK+++E + P+ T+ + I LC
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D+A ++F V PD + L+ G K K++++ + R + ++
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQR 359
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 12/238 (5%)
Query: 146 RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
+L+D + LF E+ K P + + LL + D + L +ME G+ T
Sbjct: 65 KLHDAIN-LFREMVKTRPF-PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELI 260
+ V+NC A + +M K G + D V I + G R + L+
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPD----RVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
D+M + G +PD ++YN ++ CK +++A ++ + G PN T+ + LC S
Sbjct: 179 DKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNS 238
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
G ++ A ++ ++ + P+ T L++ VK K+ EAK + ++ P+++
Sbjct: 239 GRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIV 296
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 153/318 (48%), Gaps = 12/318 (3%)
Query: 67 LTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ +R K + + E L+ E +++ + E L+ Y Q G + A+R D+M
Sbjct: 301 MLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLR 360
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+G +++ N L+ C ++ + + + +NL PD SY LL +C G
Sbjct: 361 VGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMV--DWNLKPDCYSYNTLLDGYCREGKV 418
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
KA L EM G+ T VTY TV+ L G+ ++A LW M ++GV + +
Sbjct: 419 SKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTM 478
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ + GD +R L E+ G T+++N +++ CK + EA V++ ++E G
Sbjct: 479 LDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGL 538
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYK---VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
SP+ T+RT C +GN +A++ V + M I +N+ L++GL K +K+ +
Sbjct: 539 SPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNS---LIDGLFKIRKLND 595
Query: 361 AKGVIRTIKKK-FPPNVL 377
++ ++ + PNV+
Sbjct: 596 VTDLLVEMQTRGLSPNVV 613
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++++ + GM HA+ FD+M +G + S + LL + ++FD+I
Sbjct: 162 LMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGT- 220
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +++ +HC G D A+E+L +M +G+E VTY ++N +G+ E
Sbjct: 221 GIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV 280
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN----------------------------TYG---- 250
ER+ M ++GV +V + + YG
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340
Query: 251 -----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E + DEM GLK + + N L+ YCK + EA++V+ G+ + P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ ++ T + C G KA+ + +E + P T +++GLV
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLV 448
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 11/278 (3%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
Y + G A + M+ S+ +N+L+ + R + V L E+ + LS
Sbjct: 551 GYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTR-GLS 609
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ ++YG L+ CD DKA L EM +G V + +++ LY+ EA +
Sbjct: 610 PNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVI 669
Query: 226 WSEMEKKGVDLDVAAYNVR-----ITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+M +D D+ A + + + N + +++ + +D+ + I YN +
Sbjct: 670 LDKM----LDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAID 725
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ +DEA+ V L G P+ T+ T I+ SGN D+A+K+ E + IP
Sbjct: 726 GLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIP 785
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ L+ GL K I A+ + + +K PN +
Sbjct: 786 NITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAV 823
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y G F+ R M E G R+V++ L+ + D+ L E+ +
Sbjct: 267 LVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDE 326
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D+ YG+L+ +C G + A+ + +EM G++V V T++ K G EA
Sbjct: 327 LLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEA 386
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
ER++ M + D +YN + G + L +EM G+ P ++YN ++
Sbjct: 387 ERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKG 446
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV---MVHK 338
D+A ++ + E G +PN + T + G+ D+A ++KE +
Sbjct: 447 LVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKS 506
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
FNT ++ GL K K+ EA V +K+
Sbjct: 507 TVAFNT---MISGLCKMGKLMEAGAVFDRMKE 535
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 136/316 (43%), Gaps = 44/316 (13%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
C ++ + + G D AM + ++ G +S ++FN ++ C +L + + FD +
Sbjct: 476 CTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAV-FDRM- 533
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ LSPD+I+Y L +C +G+ +A ++ ME + + + Y ++++ L+K
Sbjct: 534 KELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKL 593
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTI--- 273
+ L EM+ +G+ +V Y I+ D ++L + L EM + G P+ +
Sbjct: 594 NDVTDLLVEMQTRGLSPNVVTYGTLISGW--CDEQKLDKAFHLYFEMIERGFTPNVVVCS 651
Query: 274 -----------------------SYNFLMT---C---YCKNEMMDEAKKVYEGLEENG-C 303
++ L C KN++ EA+K+ + L+++ C
Sbjct: 652 KIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDIC 711
Query: 304 S--PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ N + I LC SG D+A V + +PD T L+ + EA
Sbjct: 712 NSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEA 771
Query: 362 -KGVIRTIKKKFPPNV 376
K ++K PN+
Sbjct: 772 FKLRDEMLEKGLIPNI 787
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 24/283 (8%)
Query: 72 LAKSKRFSDIETLI---ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L K ++ +D+ L+ ++ P + LI + D A + +M E G
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYG---TLISGWCDEQKLDKAFHLYFEMIERGF 643
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFD-----EIPKKYNLSPDK-ISYGLLLKSHCDSG 182
+V+ + ++ + R + ++ D +I +N DK + L L++ +
Sbjct: 644 TPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIAD 703
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S DK+ ++ N + N + Y ++ L K G +EA + S + +G D Y
Sbjct: 704 SLDKS-DICNSLSNN------IVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYC 756
Query: 243 VRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I + G+ + +L DEM + GL P+ YN L+ CK +D A++++ L +
Sbjct: 757 TLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQK 816
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAY----KVFKESVMVHKIP 340
G PNA T+ I C G+ DKA K+ +E + IP
Sbjct: 817 GLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRIIP 859
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ +L+K+ + G + AL + +EM G + + +L L ++G A ++ ++
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIV 218
Query: 231 KKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
G+ DV ++ + + G + E++++M GL+P+ ++YN L+ Y +
Sbjct: 219 GTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFE 278
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++V + E G S N T + C G D+A K+ +E
Sbjct: 279 GVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLRE 321
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 157/312 (50%), Gaps = 17/312 (5%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKN--DPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
+ A + + L+K +R + ++ +S K+ +P + +L+ + +AG A R
Sbjct: 1248 KIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVV---VYTSLVHGWCRAGNISEAERV 1304
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F +M G +V +++ ++ A RS + +F E+ P+ I++ L++ H
Sbjct: 1305 FGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEM-IDVGCDPNAITFNNLMRVHV 1363
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G ++K L++ N+M+ G +TY ++ + N EEA ++ + + KKG +L+ +
Sbjct: 1364 KAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV-KKGCNLNAS 1422
Query: 240 AYNVRITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
++N +G GD + +M+D +P+T++YN LM + + D K+
Sbjct: 1423 SFN----PIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKL 1478
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLV 353
+ ++EN PNA T+R I CG G+++ AY FKE + + P +++++ L
Sbjct: 1479 RKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLR 1538
Query: 354 KKKKIKEAKGVI 365
K ++K+ + ++
Sbjct: 1539 KAGQLKKHEELV 1550
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 134/255 (52%), Gaps = 4/255 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Y +AG+ A+ F++M++ G I+F+ ++ + ++ R + FD + ++
Sbjct: 1219 LVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF 1278
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + Y L+ C +G+ +A + EM+ G+ TY+ V++ L + G A
Sbjct: 1279 --EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRA 1336
Query: 223 ERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++SEM G D + + N+ + G E++ ++ ++M+ G PD I+YNFL+
Sbjct: 1337 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIES 1396
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+++ ++EA K+ +++ GC+ NA++F + G+ + A+++F + + P+
Sbjct: 1397 HCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPN 1455
Query: 342 FNTVKLLVEGLVKKK 356
T +L+ KK
Sbjct: 1456 TVTYNILMRMFADKK 1470
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 111/228 (48%), Gaps = 3/228 (1%)
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+ R +D L D + K N+ ++ +L++ + +G + +A+ N ME+ G +
Sbjct: 1190 KVRQFDLAWQLID-LMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDK 1248
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDE 262
+ ++ V++ L K+ A EA+ + ++ + + DV Y + G+ + + E
Sbjct: 1249 IAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGE 1307
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M+ AG+ P+ +Y+ ++ C++ + A V+ + + GC PNA TF + +G
Sbjct: 1308 MKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGR 1367
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+K +V+ + + PD T L+E + ++EA ++ ++KK
Sbjct: 1368 TEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK 1415
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D A +L++ M+ + VE+ T+T ++ K G A EA ++ ME G D A++V
Sbjct: 1195 DLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVV 1254
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I++ + + D ++D +PD + Y L+ +C+ + EA++V+ ++ G
Sbjct: 1255 ISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGI 1313
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN T+ I LC SG +A+ VF E + V P+ T L+ VK + ++
Sbjct: 1314 XPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ 1373
Query: 364 VIRTIKK-KFPPNVL 377
V +K+ PP+ +
Sbjct: 1374 VYNQMKRLGCPPDAI 1388
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G A+R M + +VI++N ++ + + R + LF E+ K
Sbjct: 223 LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK- 281
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ + C+ LLNEM N + V ++TV++ L K+G A
Sbjct: 282 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 341
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M K+GV+ DV Y + + + + ++ D M G P+ SYN L+
Sbjct: 342 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 401
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ + MD+A + E + G + T+ T I+ LC G A +F E V +IPD
Sbjct: 402 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 461
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++L++ L K + EA +++ I+
Sbjct: 462 LVTYRILLDYLCKNHHLAEAMVLLKAIE 489
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 121/281 (43%), Gaps = 13/281 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ S + + + QMD G P V + N L+ + C RL +L + K
Sbjct: 118 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL--K 175
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ++ L++ C G +AL L ++ +G + VTY T++N L K GN
Sbjct: 176 LGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSA 235
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLM 279
A RL M +K +V AYN I ++ D + + L EM G+ PD +YN L+
Sbjct: 236 AIRLLRSMVQKNCRPNVIAYNT-IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 294
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCS---PNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
C + E K V L E S PN F T + LC G A+ V +
Sbjct: 295 HALCN---LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 351
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNV 376
PD T L++G + ++ EA V T + K PNV
Sbjct: 352 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 3/267 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A+ +F++M + P S + F LL + + + Y V L ++ + + PD +
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM-DSFGIPPDVYTLN 151
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ S C A +L ++ G + T+ T++ L +G EA L+ + +
Sbjct: 152 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211
Query: 233 GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G DV Y + G+ L+ M +P+ I+YN ++ CK+ + EA
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++ + G SP+ T+ + I+ LC + + E V +P+ +V+
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331
Query: 352 LVKKKKIKEAKGVI-RTIKKKFPPNVL 377
L K+ I A V+ IK+ P+V+
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPDVV 358
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 120/250 (48%), Gaps = 6/250 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +M G + ++N+L+ A + V L +E+ + P+ + + ++
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVV 329
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G A ++++ M +GVE VTYT +++ + +EA +++ M KG
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389
Query: 236 LDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+V +YN+ I N Y +R+ + L+++M GL DT++YN L+ C + A
Sbjct: 390 PNVRSYNILI-NGYC-QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 447
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ + +G P+ T+R + +LC + + +A + K + D + ++G+
Sbjct: 448 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 507
Query: 353 VKKKKIKEAK 362
+ +++ A+
Sbjct: 508 CRAGELEAAR 517
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD M G +V S+N L+ + + DK L +++ + L D ++Y
Sbjct: 373 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADTVTYN 431
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C G A+ L +EM G VTY +L+ L K + EA L +E
Sbjct: 432 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 491
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGL 268
+D D+ YN+ I G+ E ++L + G
Sbjct: 492 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 129/264 (48%), Gaps = 6/264 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG + F+ M G V S++ L+ T++ + +F + ++ + D
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ-GFALDA 595
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y ++ C SG DKA E+L EM+ K V T TY ++++ L K +EA L+ E
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE 655
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ KG++L+V Y+ I G R+ E +++EM GL P+ ++N LM K
Sbjct: 656 AKSKGIELNVILYSSLIDGF--GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKT 713
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
E +DEA ++ ++E CSPN T+ I LC ++KA+ ++E IP+ T
Sbjct: 714 EEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTY 773
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIK 369
++ GL K I +A + K
Sbjct: 774 TTMISGLAKVGNITDAYSLFERFK 797
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 140/301 (46%), Gaps = 3/301 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K ++ + TL + K D K Y +I AG + A + D+M+ G +
Sbjct: 361 LGKKRKVDEALTLFDVMKKDAKPNISTYNI-IIDMLCMAGRVNEAYKIRDEMELAGLFPN 419
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++S N ++ ++ ++ +F+ ++ +P+ ++Y L+ G D A L
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASER-GCNPNSVTYCSLIDGLGKKGKIDDAYRLF 478
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
+M + G + + YT+++ + G E+ +++ EM ++G D+ N + +
Sbjct: 479 EKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKA 538
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ E+ + + ++M+ G PD SY+ L+ K E +++ + + G + +A +
Sbjct: 539 GEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAY 598
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ LC SG DKAY+V +E + H P T +V+GL K ++ EA + K
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658
Query: 371 K 371
K
Sbjct: 659 K 659
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 158/348 (45%), Gaps = 7/348 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A + + H P Y + V L K+ R + E L + + +
Sbjct: 263 DMAWKFFHELKAHGLRPDDVSYTSMVWV--LCKAGRLGEAEELFGQMEAERDVPCAYAYN 320
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I YG A FD A + +++ E G SV+SFN++L + R D+ LFD + K
Sbjct: 321 TMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK- 379
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +Y +++ C +G ++A ++ +EME G+ ++ +++ L K EE
Sbjct: 380 -DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A R++ ++G + + Y + + G G + L ++M DAG + I Y L+
Sbjct: 439 AHRIFESASERGCNPNSVTY-CSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + ++ K+Y+ + G P+ T T++ + +G +K +F++ +
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
PD + +L+ GL K + +E + + + ++ RA+ V + L
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ ++M LG + AL+ RSR + + + + P +Y +L+ +
Sbjct: 127 KVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM-RHLKFRPPFSAYTVLIGA 185
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
++ ++ALELL +M++ G EV+ +TT++ L ++G E A L E++ ++ D
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245
Query: 238 VAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ YNV I + +G G + + E++ GL+PD +SY ++ CK + EA++++
Sbjct: 246 IVLYNVCI-DCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELF 304
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+E P A + T I + FD AYK+ + IP + ++ L KK
Sbjct: 305 GQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKK 364
Query: 356 KKIKEAKGVIRTIKKKFPPNV 376
+K+ EA + +KK PN+
Sbjct: 365 RKVDEALTLFDVMKKDAKPNI 385
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 9/315 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ V RL K+ + + + ES C+LI G+ G D A R F++M +
Sbjct: 424 NIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLD 483
Query: 126 LGTPRSVISFNALL---FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
G + I + +L+ F R K+ + E+ ++ PD + +G
Sbjct: 484 AGHDANPIIYTSLIRNFFMHGRKEDGHKI---YKEMIRRGG-RPDLTLLNTYMDCVFKAG 539
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+K + +M++ G +Y+ +++ L K G A E ++ M ++G LD AYN
Sbjct: 540 EVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYN 599
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G ++ E+++EM+ + P +Y ++ K + +DEA ++E +
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G N + + I G D+AY + +E + P+ T L++ LVK ++I EA
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719
Query: 362 KGVIRTIKK-KFPPN 375
+++K+ K PN
Sbjct: 720 LICFQSMKEMKCSPN 734
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG F M + G ++NA++ +S DK + +E+ K+
Sbjct: 566 LIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKH 625
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +YG ++ D+A L E ++KG+E+ + Y+++++ K G +EA
Sbjct: 626 -VHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--------ERLKEL--------------- 259
+ EM KKG+ +V +N + + + +KE+
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILING 744
Query: 260 -------------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
EM+ GL P+ ++Y +++ K + +A ++E + NG P+
Sbjct: 745 LCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPD 804
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ +F I + + +AY+VF+E+ + + T L++ L K + +++A V
Sbjct: 805 SASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIV 862
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G D A++ FD+M + G P + + + +L +++ D V L + + K
Sbjct: 207 LLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM-KVS 265
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I+ LL C G D+A LL E +G + Y+++++ L++ +E
Sbjct: 266 GCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEV 325
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M K G++ DV Y + I G + ++++M GL PDT YN L+
Sbjct: 326 QEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKG 385
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C ++D+A+ + + +N C P + T+ I +C +G D+A ++F + + P
Sbjct: 386 FCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPS 445
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T L++GL K +++EA+
Sbjct: 446 IMTFNALIDGLCKAGELEEAR 466
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 158/359 (44%), Gaps = 41/359 (11%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
I+++ + + S V+ +L + LAK F ++E KN P LI +
Sbjct: 85 IWTTRRRSFRSWVT----HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAA 140
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
Y ++GM + A+ +F +M + G V ++N++L + ++ +++++ K N +P
Sbjct: 141 YAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM-LKLNYNP 199
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL------------- 213
++ ++ +LL C +G +D AL++ +EM KG+ T+ YT +L+ L
Sbjct: 200 NRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLL 259
Query: 214 ----------------------YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
K G +EA L EK+G L + Y+ I +
Sbjct: 260 NTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRA 319
Query: 252 DP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ ++E +M AG++PD + Y L+ +C+ M+D A + + + G SP+ +
Sbjct: 320 KRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCY 379
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
I C G DKA + E P T +L+ G+ + + EA+ + ++
Sbjct: 380 NALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQME 438
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 15/299 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR + + GM D+A+ + M + G +NAL+ L DK L EI K
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKN- 405
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +Y +L+ C +G D+A ++ N+MEN G + +T+ +++ L K G EEA
Sbjct: 406 DCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 223 ERLWSEME-----KKGVDLDVAAYNVRITNTYGGDPERLKE---------LIDEMRDAGL 268
L+ +ME + L A V T + ERL E L+ ++ D+G+
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PD ++YN L+ +CK + ++ A K++ L+ G SP++ T+ T I + A++
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
V + V P K L+ +K K+ A + + P K EE
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHF 644
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ L++ D ++L E++N +++ T++ ++ K G AE+A + +
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLMTCYCKNEM 287
M+ G DV YN + + L + ++M P+ ++ L+ CKN
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
D+A K+++ + + G PN + + LC + D +++ + PD T
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKK 371
L++G K +I EA +++ +K+
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKE 300
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 163/448 (36%), Gaps = 115/448 (25%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL-------IESHKNDPKI 94
D AL++ + +++ SP + Y A K F D+ L +E KND
Sbjct: 358 DYALNMLNDMTQRGLSPDTYCYN--------ALIKGFCDVGLLDKARSLQLEISKNDCFP 409
Query: 95 TQEPY---LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS------ 145
T Y +C + R+ G+ D A + F+QM+ LG S+++FNAL+ ++
Sbjct: 410 TSCTYTILICGMCRN----GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 146 -RLYDKV-----PILF--------------------------DEIPKKYNL--------- 164
L+ K+ P LF I K Y L
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
PD ++Y +L+ C + + + A +L E++ KG +VTY T+++ ++ E+A R
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585
Query: 225 LWSEMEKKGVDLDVAAYNVRIT-----------------------------------NTY 249
+ +M K G A Y +T +
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFE 645
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ E+ + EM + Y + C+ +EA K++ L+E N +
Sbjct: 646 KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 705
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-- 367
I LC GN + A +F ++ + L+ L+ + K+K A ++
Sbjct: 706 CVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMN 765
Query: 368 ---------IKKKFPPNVLRAWKKVEEE 386
+ + +L WK E E
Sbjct: 766 SAGYDLDEYLHHRIKSYLLSVWKAQEME 793
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
++++E++++ ++ +++ L+ Y K+ M ++A + + +++ GC P+ T+ + ++ +
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNV 376
F A V+ + + ++ P+ T +L+ GL K K +A K +K PPN
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 377 L 377
+
Sbjct: 237 M 237
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 7/255 (2%)
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G +V +FN L+ A + LF+E+ K +PD+++Y +L+ + C SG K
Sbjct: 401 GLSPNVYTFNILINALCKVGDPHLAVRLFEEM-KSSGCTPDEVTYNILIDNLCSSGKLAK 459
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL+LL EME G +TVTY T+++ L K+ EEAE ++ +M+ G+ + +N I
Sbjct: 460 ALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLID 519
Query: 247 NTYGGDPERL---KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ ER+ EL+D+M GL+P+ ++YN ++T YCK + +A + + + NG
Sbjct: 520 GLC--NAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+ T+ T I LC + A K+ + M P +++ L + ++A
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637
Query: 364 VIRTIKK-KFPPNVL 377
+ R + + PP+
Sbjct: 638 LFREMTEVGGPPDAF 652
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 159/349 (45%), Gaps = 8/349 (2%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
+ LR + DP+ AL + +S SR + +R+L + F ++ L+ + +
Sbjct: 61 TALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREG 120
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+ + I SY + +FD A +Q+D G + +N LL +
Sbjct: 121 HEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLL 180
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ E+ + + PD +++ ++ + C + + A+ +L EM + V T+TT++
Sbjct: 181 ESAYTEMSSQ-GIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLME 239
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGL 268
++G+ E A RL + M + G NV I N Y G + L + E+ D G
Sbjct: 240 GFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI-NGYCKLGRVGDALGYIQQEIAD-GF 297
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+PD ++++ + C+N +D A KV + + GC P+ T+ T I LC +G ++A
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKG 357
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
+ + V +PD T L+ L + +++EA + R + K PNV
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
E L+ + + G + A+R +M E+G + ++ N L+ C R+ D + +
Sbjct: 231 ETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQ 290
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
EI + PD++++ + C +G D AL++L M +G E TY+TV+NCL
Sbjct: 291 QEIADGF--EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISY 275
G EEA K ++++M D+G PDT ++
Sbjct: 349 NGELEEA----------------------------------KGIVNQMVDSGCLPDTTTF 374
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ C ++EA + L G SPN TF I LC G+ A ++F+E
Sbjct: 375 NTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKS 434
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
PD T +L++ L K+ +A +++ ++ P
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCP 473
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 6/329 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ AL + + +S+ SP S ++ + K R D I+ D
Sbjct: 248 EAALRLKARMSEMGCSPTS--VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFS 305
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+ Q G DHA++ M + G V +++ ++ C L + I+ +
Sbjct: 306 TFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS 365
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD ++ L+ + C ++AL+L E+ KG+ T+ ++N L K G+
Sbjct: 366 --GCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPH 423
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A RL+ EM+ G D YN+ I N G + +L+ EM +G T++YN ++
Sbjct: 424 LAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTII 483
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK ++EA++V++ ++ G NA TF T I LC + D A ++ + +
Sbjct: 484 DGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQ 543
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
P+ T ++ K+ I +A +++T+
Sbjct: 544 PNNVTYNSILTHYCKQGNISKAADILQTM 572
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 148/322 (45%), Gaps = 5/322 (1%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
L +E ++ALD+ ++ SP + Y ++ + L K L E K+
Sbjct: 381 LCTENQLEEALDLARELTVKGLSP--NVYTFNILINALCKVGDPHLAVRLFEEMKSSGCT 438
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
E LI + +G A+ +M+ G P+S +++N ++ + R ++ +
Sbjct: 439 PDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEV 498
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
FD++ + + I++ L+ C++ D A EL+++M ++G++ VTY ++L
Sbjct: 499 FDQMDVT-GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTI 273
KQGN +A + M G ++DV Y I + +L+ MR G+KP
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK 617
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKE 332
+YN ++ + +A ++ + E G P+A T++ LC G G +A+ E
Sbjct: 618 AYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVE 677
Query: 333 SVMVHKIPDFNTVKLLVEGLVK 354
IP+F++ ++L EGL+
Sbjct: 678 MADNGFIPEFSSFRMLAEGLLN 699
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 10/319 (3%)
Query: 55 YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS-YGQAGMF 113
YA P + Y V RL K+KR D +E I + ++ N + S Q
Sbjct: 109 YAPPDALTYGP--IVERLCKTKRIDDALATVEEMATR-GIKPDAFIYNFVLSGLCQEEKV 165
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A F++M + +V+++N L+ ++ + LF E+ K P ++SY
Sbjct: 166 EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNT 224
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C A ++ ++M VTYTT+++ L K G + A + M KKG
Sbjct: 225 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284
Query: 234 VDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
V +VA Y+ I R+ E L+++M G+ P ++YN L+ C+ + +++
Sbjct: 285 VTPNVATYSCLIDGF--CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLED 342
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A K++ G+ + C P T+ T + LC D A++++ E + PD T L
Sbjct: 343 AFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAW 402
Query: 351 GLVKKKKIKEAKGVIRTIK 369
GL + K+ EA+ ++ +K
Sbjct: 403 GLTRAGKVHEAQELMEKMK 421
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 19/218 (8%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
YG+L+ C G+ D+A +LL+ M K + + Y+T++N L K EEA L +M
Sbjct: 47 GYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM 106
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPERLKEL---------IDEMRDAGLKPDTISYNFLMT 280
A Y TYG ERL + ++EM G+KPD YNF+++
Sbjct: 107 ---------ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLS 157
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ E ++EA+ ++E + + +PN T+ T I LC + + AY++FKE +P
Sbjct: 158 GLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVP 217
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ L++G KKK + AK V + ++ PNV+
Sbjct: 218 TEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV 255
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 135/313 (43%), Gaps = 41/313 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI + G FD A + M R I+++ ++ + C +R+ + ++ E +
Sbjct: 51 LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELI--EKMAR 108
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++YG +++ C + D AL + EM +G++ Y VL+ L ++ EE
Sbjct: 109 YA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 167
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ +M K+ ++ +V YN I E EL EM G P +SYN L+
Sbjct: 168 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 227
Query: 281 CYCKNEMMDEAKKVYE-----------------------------------GLEENGCSP 305
+CK + + AK V++ G+ + G +P
Sbjct: 228 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 287
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ I C D+A+K+ ++ V P T +L+ L + K+++A +
Sbjct: 288 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347
Query: 366 RTI-KKKFPPNVL 377
R + +++ P V+
Sbjct: 348 RGMAQRRCHPTVV 360
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 2/239 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +A + A F +M G + +S+N L+ + + +FD++ +
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS- 248
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N P+ ++Y L+ SG A E+L+ M KGV TY+ +++ K +EA
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M +G+ V YN+ + + D E +L M P ++YN L+
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRA 368
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C ++ +D A ++Y + GC P+A T+ T + L +G +A ++ ++ + + P
Sbjct: 369 LCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P ++N + + K +++ K+VY+G+ E G + A+ + I LC GNFD+AYK+
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+ ++ L K +++EA+ +I + + PP+ L
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDAL 115
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 139/276 (50%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I+ + G +A++ +M+E G V+++N ++ + + R ++ F E+ +
Sbjct: 182 IIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ- 240
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y +L C+ G ++A L +M + V TVT+T +++ L K+G EA
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R++ M + GV+ D Y+ + + ++L D M G P YN L+
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK+ ++EAK + + + +P+ T+ T + C +G A K+FKE +PD
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
T +L++GL K + EA +++ +++ K P++
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHI 456
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y D A + FD M G SV +N L+ +SR ++ L E+ +
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR- 380
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L+PD ++Y L++ C +G A +L EM + G+ ++TY+ +L+ L K G+ +EA
Sbjct: 381 DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEA 440
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL M++ ++ + YN+ I G E +EL + G++P ++Y +++
Sbjct: 441 FRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISG 500
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + +EA +++ + NGC PN+ T+ I +G+ A ++ +E V D
Sbjct: 501 LLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSAD 560
Query: 342 FNTVKLLVE 350
+T ++L++
Sbjct: 561 SSTFQMLLD 569
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 4/256 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ +F+Q+ + V+ FN LL + + + Y V L ++ N+ P+ + +L+
Sbjct: 53 AVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS-NIRPNVYTLTILI 111
Query: 176 KSHCDSGSSDK--ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
C S A L +M G++ T VT+ T+LN L + +A +L+ E+ K G
Sbjct: 112 NCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG 171
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ Y I G +L+ +M + G KPD ++YN ++ CK+ +EA
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + + G PN T+ + ++ C G ++A +FK+ + + +P+ T +LV+GL
Sbjct: 232 YFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291
Query: 353 VKKKKIKEAKGVIRTI 368
K+ I EA+ V +
Sbjct: 292 CKEGMILEARRVFEMM 307
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 39/290 (13%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ AM F +M + G P +V++++++L C +L ++ LF ++ + N+ P+ +++
Sbjct: 228 NEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL-NEATSLFKQMIGR-NVMPNTVTFT 285
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ C G +A + M GVE TY+ +++ Q +EA++L+ M K
Sbjct: 286 ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345
Query: 233 GVDLDVAAYNVRI---------------------------TNTY---------GGDPERL 256
G V YN+ I T TY G P+
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVA 405
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
++L EM GL PD+I+Y+ L+ CK+ +DEA ++ + ++E+ P+ + I
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQG 465
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+C G + A ++F + P T +++ GL+K+ EA + R
Sbjct: 466 MCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFR 515
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 10/275 (3%)
Query: 8 RRLCTATTAAGSSTTASSISVSKAKSKLRSEFD-PDKALDIYSSVSKHYASPVSSRYAQD 66
RR+ T G A + S L+S+ D K DI V K +A V +
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM--VGKGFAPSVR---VYN 355
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ + KS+R ++ +TL+ S D +T + L++ + QAG A + F +M
Sbjct: 356 ILINGHCKSRRLNEAKTLL-SEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCS 414
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G I+++ LL + D+ L + ++ + P Y +L++ C+ G +
Sbjct: 415 YGLLPDSITYSILLDGLCKHGHLDEAFRLLKAM-QESKIEPHICIYNILIQGMCNFGKLE 473
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A EL + + KG++ + VTYT +++ L K+G + EA ++ +M G + YNV I
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533
Query: 246 TNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
GDP LI+EM G D+ ++ L+
Sbjct: 534 QGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 37/288 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A D+M + G ++ ++N+L+ A + D+ + EI +K
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK- 390
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD I+Y +L+ +C ++ KA L +EM G++ T TYT++L+ L K+ +EA
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI------TNTYG-------------------------- 250
+ L+ ++ +GV DV +N I +N G
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510
Query: 251 ----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E +EL DEM+ G+KPD IS+N L++ Y + + +A +V + + G +P
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
T+ + LC + D A ++ KE V PD T L+EG+ K
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 60 SSRYAQDLTVRRLAKS---KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
SS Y ++ + L K K+ D +E+ P I ++ Y +G + A
Sbjct: 219 SSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT---YNTIVHGYCSSGRVEAA 275
Query: 117 MRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
M ++ +L+ C + RL + I F+E+ +K L P + Y L+
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI-FEEMVQK-GLRPSAVIYNTLI 333
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C+ G+ D A +EM KG+ T TY ++++ L+ + +EAE + E+++KG+
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 236 LDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D YN+ I N Y + ++ L DEM +G+KP +Y L+ K M EA
Sbjct: 394 PDAITYNILI-NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+++ + G P+ F I C + N A+++ K+ + PD T +++G
Sbjct: 453 LFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512
Query: 354 KKKKIKEAKGVIRTIKKK 371
++ K++EA+ + +K++
Sbjct: 513 REGKVEEARELFDEMKRR 530
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 130/278 (46%), Gaps = 9/278 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + G A M+ G +++++N ++ C+ R+ IL K+
Sbjct: 227 MINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL--TTMKR 284
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +YG L+ C G ++A ++ EM KG+ + V Y T+++ +GN +
Sbjct: 285 QKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDM 344
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A EM KKG+ ++ YN I + +R E +I E+++ G+ PD I+YN L
Sbjct: 345 ASAYKDEMLKKGISPTMSTYNSLIHALFM--EQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YC+ +A +++ + +G P T+ + ++ L +A +FK+
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
+PD L++G +K A +++ + + K PP+
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD 500
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 166/395 (42%), Gaps = 73/395 (18%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLI 85
S+S K+ L S P ++ S ++ H+ S+R +Q ++++ S S I +TL+
Sbjct: 19 SISLQKTPLES---PVSTTNLASPLTPHFLEQ-SARSSQWHFIKQVESSLTPSLISQTLL 74
Query: 86 ESHKNDP-----------KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
H++ K++ LC I + A+ Q GT S+
Sbjct: 75 NLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIRE 134
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
L A +R RL K I+FD L+KS CD +D+A E M
Sbjct: 135 IFEFL-AASRDRLGFKSSIVFD----------------YLIKSCCDMNRADEAFECFYTM 177
Query: 195 ENKGV-----------------------------------EVTTVTYTTVLNCLYKQGNA 219
+ KGV + + T+ ++N L K+G
Sbjct: 178 KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL 237
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNF 277
++A+ ME GV ++ YN I + Y G E ++ M+ ++PD+ +Y
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNT-IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L++ CK ++EA K++E + + G P+A + T I C GN D A +K+ ++
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA-SAYKDEMLKK 355
Query: 338 KI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I P +T L+ L +++ EA+ +I+ I++K
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
F ++ G VI FNAL+ C+ S + +L D + + PD++++ +++ H
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM--DRMKVPPDEVTFNTIMQGH 511
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G ++A EL +EM+ +G++ +++ T+++ ++G+ ++A R+ +EM G + V
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571
Query: 239 AAYNVRITNTYGGDPERL-KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
YN + L +EL+ EM G+ PD +Y L+ K + DE K
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKK 161
+++ + + G + A FD+M G ISFN L+ +R + D + + +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+N P ++Y L++ C + D A ELL EM +KG+ TY T++ + K +E
Sbjct: 567 FN--PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G D A++ FD+M + G P + + + +L +++ D V L + + K
Sbjct: 207 LLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM-KVS 265
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I+ LL C G D+A LL E +G + Y+++++ L++ +E
Sbjct: 266 GCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEV 325
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M K G++ DV Y + I G + ++++M GL PDT YN L+
Sbjct: 326 QEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKG 385
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C ++D+A+ + + +N C P + T+ I +C +G D+A ++F + + P
Sbjct: 386 FCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPS 445
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T L++GL K +++EA+
Sbjct: 446 IMTFNALIDGLCKAGELEEAR 466
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 158/359 (44%), Gaps = 41/359 (11%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
I+++ + + S V+ +L + LAK F ++E KN P LI +
Sbjct: 85 IWTTRRRSFRSWVT----HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAA 140
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
Y ++GM + A+ +F +M + G V ++N++L + ++ +++++ K N +P
Sbjct: 141 YAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM-LKLNYNP 199
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL------------- 213
++ ++ +LL C +G +D AL++ +EM KG+ T+ YT +L+ L
Sbjct: 200 NRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLL 259
Query: 214 ----------------------YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
K G +EA L EK+G L + Y+ I +
Sbjct: 260 NTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRA 319
Query: 252 DP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ ++E +M AG++PD + Y L+ +C+ M+D A + + + G SP+ +
Sbjct: 320 KRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCY 379
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
I C G DKA + E P T +L+ G+ + + EA+ + ++
Sbjct: 380 NALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQME 438
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 125/278 (44%), Gaps = 14/278 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR + + GM D+A+ + M + G +NAL+ L DK L EI K
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKN- 405
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +Y +L+ C +G D+A ++ N+MEN G + +T+ +++ L K G EEA
Sbjct: 406 DCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 223 ERLWSEME---KKGVDLDVAAYNVRITNTYGGDPERLKE-----LIDEMRDAGLKPDTIS 274
L+ +ME + L ++ R+ +T G +E ++D+M G P +
Sbjct: 466 RHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAV 525
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y LMT C+ + A ++ + S T + H G +KA + E
Sbjct: 526 YKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHF-EKGELEKAVRCLLE-- 582
Query: 335 MVHKIPDFNTV--KLLVEGLVKKKKIKEAKGVIRTIKK 370
M K+ +F + + GL + ++ +EA + +K+
Sbjct: 583 MNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKE 620
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 1/204 (0%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ L++ D ++L E++N +++ T++ ++ K G AE+A + +
Sbjct: 97 VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDAGLKPDTISYNFLMTCYCKNEM 287
M+ G DV YN + + L + ++M P+ ++ L+ CKN
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
D+A K+++ + + G PN + + LC + D +++ + PD T
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKK 371
L++G K +I EA +++ +K+
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKE 300
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 147/373 (39%), Gaps = 41/373 (10%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL-------IESHKNDPKI 94
D AL++ + +++ SP + Y A K F D+ L +E KND
Sbjct: 358 DYALNMLNDMTQRGLSPDTYCYN--------ALIKGFCDVGLLDKARSLQLEISKNDCFP 409
Query: 95 TQEPY---LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
T Y +C + R+ G+ D A + F+QM+ LG S+++FNAL+ ++ ++
Sbjct: 410 TSCTYTILICGMCRN----GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEA 465
Query: 152 PILF--DEIPKKYNLSPDKISYGLLLKSHCDSG-----SSDKALELLNEMENKGVEVTTV 204
LF EI K +L ++S G +G + A +L++M G ++
Sbjct: 466 RHLFYKMEIGKNPSLFL-RLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSA 524
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR 264
Y ++ ++G A LW + + + + + G+ E+ + EM
Sbjct: 525 VYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMN 584
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
+ Y + C+ +EA K++ L+E N + I LC GN +
Sbjct: 585 FKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLE 644
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-----------IKKKFP 373
A +F ++ + L+ L+ + K+K A ++ + +
Sbjct: 645 MAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIK 704
Query: 374 PNVLRAWKKVEEE 386
+L WK E E
Sbjct: 705 SYLLSVWKAQEME 717
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
++++E++++ ++ +++ L+ Y K+ M ++A + + +++ GC P+ T+ + ++ +
Sbjct: 117 KILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM 176
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNV 376
F A V+ + + ++ P+ T +L+ GL K K +A K +K PPN
Sbjct: 177 VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNT 236
Query: 377 L 377
+
Sbjct: 237 M 237
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 10/293 (3%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
++ I +L+E K+D I + Y N LI + + A + F++M G +++N
Sbjct: 260 WNKITSLVEKMKSD-GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYN 318
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
ALL +S + + +E+ SP ++Y L+ ++ G D+A+EL N+M
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMELN-GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPE 254
KG + TYTT+L+ + G E A ++ EM G ++ +N I YG G
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFI-KMYGNRGKFV 436
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ ++ DE+ GL PD +++N L+ + +N M E V++ ++ G P TF T I
Sbjct: 437 DMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 315 --YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
Y CGS F++A V++ + PD +T ++ L + ++++ V+
Sbjct: 497 SAYSRCGS--FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 7/308 (2%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ + L K R S L + D +LI ++ +G + A+ F +M+E
Sbjct: 178 IVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEE 237
Query: 127 GTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS-S 184
G ++I++N +L + ++K+ L +++ K ++PD +Y L+ + C GS
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLI-TCCKRGSLH 295
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
+A ++ EM+ G VTY +L+ K +EA ++ +EME G + YN
Sbjct: 296 QEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSL 355
Query: 245 ITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I+ Y D + EL ++M + G KPD +Y L++ + + ++ A ++E + G
Sbjct: 356 IS-AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAG 414
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C PN TF +I G F K+F E + PD T L+ + E
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 363 GVIRTIKK 370
GV + +K+
Sbjct: 475 GVFKEMKR 482
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 144/332 (43%), Gaps = 39/332 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K + + LI +Y + G F+ AM + +M + G + ++N +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R ++++ + E+ + P++++Y LL ++ + L E+ +
Sbjct: 531 LAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV 589
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
+E V T++ K EAER +SE++++G D+ N ++ YG
Sbjct: 590 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS-IYGRRQMVGKA 648
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
D + +E++ E+ G+KPD ISYN ++
Sbjct: 649 NEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYA 708
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+N M +A +++ + ++G P+ T+ T+I F++A V + + P+
Sbjct: 709 YCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPN 768
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
NT +V+G K + EAK + ++ P
Sbjct: 769 QNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 7/349 (2%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
I+ ++++ R+ + ++ S H SP + + L + + + L
Sbjct: 65 ITSQTSRNRNRTRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDALLSELF 124
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT-- 143
E K+ P+ T L ++ G FD A+ FD + +S++ + + +
Sbjct: 125 EPFKDKPESTSSELLA-FLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISML 183
Query: 144 -RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
+ LF+ + ++ S D SY L+ + +SG +A+ + +ME +G + T
Sbjct: 184 GKEGRVSSAANLFNGL-QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPT 242
Query: 203 TVTYTTVLNCLYKQGNA-EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELI 260
+TY +LN K G + L +M+ G+ D YN IT G + ++
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+EM+ AG D ++YN L+ Y K+ EA KV +E NG SP+ T+ + I
Sbjct: 303 EEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARD 362
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
G D+A ++ + PD T L+ G + K++ A + ++
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMR 411
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +Y + GM D AM +QM E GT V ++ LL R+ + +F+E+ +
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEM-RN 412
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++ +K + + G +++ +E+ G+ VT+ T+L + G E
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ EM++ G + +N I+ + G E+ + M DAG+ PD +YN ++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ M ++++KV +E+ C PN T+ + ++ AY KE ++H +
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH----------AYANGKEIGLMHSL- 581
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVP 391
+ + G+++ + + V+ K P RA+ +++E G P
Sbjct: 582 ----AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSP 627
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHA 116
S+ Y ++ + L K + + I S +N + +P + +I Y G + A
Sbjct: 234 STVYTFNIMINVLCKEGKLKKAKDFIGSMEN---LGVKPNVVTYNTVIHGYCSRGRVEGA 290
Query: 117 MRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
D M G ++ +L+ C +L + IL E K+ L P ++Y L+
Sbjct: 291 RMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGIL--EKMKEIGLLPTAVTYNTLI 348
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+C+ G KA +EM + + T TY +++ L+ +G +EA+ + +M G+
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408
Query: 236 LDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D YN+ I N Y G+ ++ L DEM G++P ++Y L+ K M A
Sbjct: 409 PDSITYNILI-NGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADD 467
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++E + G SP+ F I C +GN D+A+ + KE + +PD T L++G
Sbjct: 468 LFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRC 527
Query: 354 KKKKIKEAKGVIRTIKKK 371
++ K++EA+ +++ +K++
Sbjct: 528 REGKVEEARELLKEMKRR 545
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 2/213 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G A D+M G +++++ +L++ ++ LF++I ++
Sbjct: 417 LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE- 475
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD I + L+ HC +G+ D+A LL EM+ + + VTY T++ ++G EEA
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEA 535
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM+++G+ D +YN I+ + GD + DEM G P ++YN L+
Sbjct: 536 RELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
CKN+ D A+++ + + G +P+ +T+ + I
Sbjct: 596 LCKNQQGDLAEELLKEMVSKGITPDDSTYFSLI 628
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 135/270 (50%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G A D+M +V ++N L+ A D+ + ++
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS- 405
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I+Y +L+ +C G++ KA L +EM +KG++ T VTYT+++ L K+ + A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ ++ ++G D+ +N I + G+ +R L+ EM + PD ++YN LM
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ ++EA+++ + ++ G P+ ++ T I G+ + A+ + E + + P
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++GL K ++ A+ +++ + K
Sbjct: 586 LLTYNALIQGLCKNQQGDLAEELLKEMVSK 615
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 119/244 (48%), Gaps = 3/244 (1%)
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
D LGT S++ F+ L+ AC + D FD + +K + P ++ +L
Sbjct: 159 DRLGTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEK-GVVPKIETFNAMLSLFLKLNQ 216
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
++ L EM ++ T T+ ++N L K+G ++A+ ME GV +V YN
Sbjct: 217 TETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNT 276
Query: 244 RITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I G E + ++D M++ G++PD+ +Y L++ CK ++EA + E ++E G
Sbjct: 277 VIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIG 336
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P A T+ T I C G+ KA+ E V +P +T LL+ L + K+ EA
Sbjct: 337 LLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEAD 396
Query: 363 GVIR 366
G+I+
Sbjct: 397 GMIK 400
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 38/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR+ + D A FD M E G + +FNA+L + + V +L+ E+ +
Sbjct: 172 LIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM-FRL 230
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ ++ +++ C G KA + + MEN GV+ VTY TV++ +G E A
Sbjct: 231 KIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGA 290
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M+ +GV+ D Y I+ GG E ++++M++ GL P ++YN L+
Sbjct: 291 RMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDG 350
Query: 282 YC-----------KNEM------------------------MDEAKKVYEGLEENGCSPN 306
YC ++EM MDEA + + + ++G P+
Sbjct: 351 YCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPD 410
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI- 365
+ T+ I C GN KA+ + E + P T L+ L K+ ++K A +
Sbjct: 411 SITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFE 470
Query: 366 RTIKKKFPPNVL 377
+ I++ P+++
Sbjct: 471 KIIREGASPDLI 482
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 8/305 (2%)
Query: 76 KRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+++ ++ +I+ P P L +IR G A M A+ F Q+ + +
Sbjct: 137 EQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQA 196
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N+++ Y+KV L++E+ + + PD ++Y L+ + C G D A+ LLNEM
Sbjct: 197 YNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEM 256
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
+ G++ T YT +++ +K N A L+ EM DV Y I G
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGL--GKAG 314
Query: 255 RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
R+ E EM+ G KPDT+ N ++ K +D+ K++E + + C PN T+
Sbjct: 315 RIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYN 374
Query: 312 TWIYHLCGS-GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T I L S + + F+ P T +L++G K +I++A ++ + +
Sbjct: 375 TIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434
Query: 371 K-FPP 374
K FPP
Sbjct: 435 KGFPP 439
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 14/310 (4%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL ++ + Y P Y + +R L K+ R + + + + N+
Sbjct: 284 ALSLFEEMRYMYCRPDVFTYTE--LIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNM 341
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD--EIPKK 161
I G+AG D ++ F++M +V+++N ++ A S+ +V +F E K
Sbjct: 342 INFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESK--SRVSEVFSWFERMKG 399
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SP +Y +L+ C + +KA+ LL EM+ KG Y ++++ L K +
Sbjct: 400 SGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ E+++ Y V I + G RL + L DEM G P+ +YN L
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHL--GKAGRLDDAINLFDEMSKLGCTPNVYAYNAL 517
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M+ + M+DEA ++E+GC P+ ++ + L +G +A ++ K S +
Sbjct: 518 MSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTI 577
Query: 336 VHKIPDFNTV 345
+NTV
Sbjct: 578 KPDAVSYNTV 587
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 9/275 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK-RFSDIETLIESHKNDPKITQEPYL 100
D L ++ + + P Y + ++ L +SK R S++ + E K I+ P+
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTY--NTIIKALFESKSRVSEVFSWFERMKGS-GISPSPFT 408
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+ LI + + + AM ++MDE G P ++ +L+ A +++ YD LF E+
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ S ++ Y +++K +G D A+ L +EM G Y +++ L +
Sbjct: 469 ENCGSSSARV-YAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACML 527
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
+EA +M++ G D+ +YN+ I N G P R E++ M+++ +KPD +SYN
Sbjct: 528 DEALTTMRKMQEHGCLPDINSYNI-ILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+++ M +EA ++ + + G + T+ +
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSS 621
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 146/366 (39%), Gaps = 41/366 (11%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA+ I+ + P + Y + + L ++ + L N+ + +
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIM--LIHEGQYEKVHELYNEMSNEGHCQPDTVTYS 234
Query: 103 -LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI ++ + G D A+R ++M E G + + ++ + LF+E+
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYM 294
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD +Y L++ +G D+A +EM+ +G + TV ++N L K G ++
Sbjct: 295 Y-CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDD 353
Query: 222 AERLWSEMEKKGVDLDVAAYNV----------RITNTY---------GGDP--------- 253
+L+ EM +V YN R++ + G P
Sbjct: 354 GLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILI 413
Query: 254 ---------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
E+ L++EM + G P +Y L+ K + D A ++++ L+EN S
Sbjct: 414 DGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 473
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+A + I HL +G D A +F E + P+ L+ GL + + EA
Sbjct: 474 SSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTT 533
Query: 365 IRTIKK 370
+R +++
Sbjct: 534 MRKMQE 539
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 172/364 (47%), Gaps = 9/364 (2%)
Query: 5 RHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
R + + A A G + +S + A L D+ALD++ + + P +Y+
Sbjct: 328 RSVSEIWNALKADGYNDNV--VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP--QQYS 383
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY-GQAGMFDHAMRTFDQM 123
+ + K+ RF+ L +H N T Y L +Y G++G A++ ++ M
Sbjct: 384 YNSLISGFLKADRFNRALELF-NHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELM 442
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
G V++ NA+L+ ++ +F E+ K +SPD I+Y +++K + +
Sbjct: 443 KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL-KAMGISPDNITYTMMIKCCSKASN 501
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+D+A+++ EM + ++++ LYK G EA +++ E+++ ++ YN
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 244 RITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ G + + +L++ M P+ I+YN ++ C CKN ++ A + + NG
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C P+ +++ T +Y L D+A+ +F + V PD+ TV ++ V+ +KEA
Sbjct: 622 CMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLA-PDYATVCTILPSFVRSGLMKEAL 680
Query: 363 GVIR 366
+R
Sbjct: 681 HTVR 684
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+ + LG S+NAL+ L D LF E+ K+ PD+ +Y L+L + S
Sbjct: 756 KFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEM-KRLGCDPDEFTYHLILDAMGKS 814
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+ L++ EM NKG + T VTY T+++ L K +EA L+ ++ +G Y
Sbjct: 815 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 874
Query: 242 NVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ G+ E + L DEM + G +P+ YN L+ Y ++ +++E + E
Sbjct: 875 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 934
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G +P+ ++ I LC G + FK+ + PD T LL+ GL K +++E
Sbjct: 935 QGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEE 994
Query: 361 AKGVIRTIKKK-FPPNV 376
A + ++KK PN+
Sbjct: 995 ALSLYNDMEKKGIAPNL 1011
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 149/315 (47%), Gaps = 11/315 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHK-NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ L + R +D + + K +D K + Y+ L+ G +G ++ + G
Sbjct: 283 IQILCDAGRLADAKDVFWKMKASDQKPDRVTYI-TLLDKCGDSGDSRSVSEIWNALKADG 341
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+V+S+ A + A + D+ +FDE+ +K + P + SY L+ + ++A
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK-GIIPQQYSYNSLISGFLKADRFNRA 400
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LEL N M G T+ +N K G + +A + + M+ KG+ DV A N +
Sbjct: 401 LELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVL-- 458
Query: 248 TYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
YG G K + E++ G+ PD I+Y ++ C K DEA K++ + EN C
Sbjct: 459 -YGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRC 517
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+P+ + I L +G ++A+K+F E ++ P T L+ GL ++ K+KE
Sbjct: 518 APDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQ 577
Query: 364 VIRTIK-KKFPPNVL 377
++ + FPPN++
Sbjct: 578 LLEGMNSNSFPPNII 592
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 135/303 (44%), Gaps = 37/303 (12%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
Q G D A+ FD+M + G S+N+L+ ++ +++ LF+ + + +P+
Sbjct: 358 QVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHM-NIHGPTPNG 416
Query: 169 ISYGLLLKSHCDSGSSDKALE-----------------------------------LLNE 193
++ L + H SG S KAL+ + +E
Sbjct: 417 YTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHE 476
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGD 252
++ G+ +TYT ++ C K NA+EA ++++EM + DV A N I Y G
Sbjct: 477 LKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGR 536
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
++ E+++ L+P +YN L+ + + E ++ EG+ N PN T+ T
Sbjct: 537 GNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNT 596
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
+ LC +G + A + M +PD ++ ++ GLVK+ ++ EA + +KK
Sbjct: 597 VLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVL 656
Query: 373 PPN 375
P+
Sbjct: 657 APD 659
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 128/252 (50%), Gaps = 6/252 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + G++ + ++ ++M G + +++N ++ +S++ D+ L+ ++ +
Sbjct: 807 ILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE- 865
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP +YG LL G+ + A L +EM G E Y +LN G+ E+
Sbjct: 866 GFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKV 925
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLM 279
L+ M ++G++ D+ +Y V + +T D RL + + ++ D GL+PD I+YN L+
Sbjct: 926 CELFESMVEQGMNPDIKSYTV-VIDTLCAD-GRLNDGLSYFKQLTDMGLEPDLITYNLLI 983
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K+ ++EA +Y +E+ G +PN T+ + I +L +G +A K+++E +
Sbjct: 984 HGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWK 1043
Query: 340 PDFNTVKLLVEG 351
P+ T L+ G
Sbjct: 1044 PNVFTYNALIRG 1055
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 10/219 (4%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T P L L++ G + A FD+M E G + +N LL + +KV L
Sbjct: 873 TYGPLLDGLLKD----GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+ + ++ ++PD SY +++ + C G + L ++ + G+E +TY +++ L
Sbjct: 929 FESMVEQ-GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLG 987
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPD 271
K G EEA L+++MEKKG+ ++ YN I Y G + E + +E+ G KP+
Sbjct: 988 KSGRLEEALSLYNDMEKKGIAPNLYTYNSLIL--YLGKAGKAAEAGKMYEELLAKGWKPN 1045
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+YN L+ Y + + A Y + GC PN++T+
Sbjct: 1046 VFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 139/325 (42%), Gaps = 7/325 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP++AL+++ SV++ V + + + + + R D+ + + +
Sbjct: 80 DPEEALELFLSVARQ-PRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT 138
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
C + + G G A M E G + ++N L++ +S +D+ + +
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSG-FDREAMDVYKAM 197
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ P +Y +L+ + ++ + LL EME +GV +YT + L + G
Sbjct: 198 AADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRL 257
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYN 276
EEA R+ +ME++G DV V I D RL K++ +M+ + KPD ++Y
Sbjct: 258 EEAYRILRKMEEEGCKPDVVTNTVLIQILC--DAGRLADAKDVFWKMKASDQKPDRVTYI 315
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ + +++ L+ +G + N ++ + LC G D+A VF E
Sbjct: 316 TLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEA 361
IP + L+ G +K + A
Sbjct: 376 GIIPQQYSYNSLISGFLKADRFNRA 400
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 8/306 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +++S + + P + L + + KS R D+ + E N +
Sbjct: 783 DIAEELFSEMKRLGCDP--DEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYN 840
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I ++ M D A+ + Q+ G + ++ LL + + LFDE+ +
Sbjct: 841 TIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM-LE 899
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ Y +LL + +G ++K EL M +G+ +YT V++ L G +
Sbjct: 900 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLND 959
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
+ ++ G++ D+ YN+ I G RL+E L ++M G+ P+ +YN L
Sbjct: 960 GLSYFKQLTDMGLEPDLITYNLLIHGL--GKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 1017
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ K EA K+YE L G PN T+ I SG+ + A+ + ++
Sbjct: 1018 ILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGC 1077
Query: 339 IPDFNT 344
P+ +T
Sbjct: 1078 RPNSST 1083
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 18/316 (5%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY--LC 101
ALD+ S++ + P S Y + + L K R + + K K+ Y +C
Sbjct: 610 ALDMLYSMTMNGCMPDLSSY--NTVMYGLVKEDRLDEAFWMFCQMK---KVLAPDYATVC 664
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVI---SFNALLFACTRSRLYDKVPILFDEI 158
++ S+ ++G+ A+ T + + P S + S ++L+ + +K I F E
Sbjct: 665 TILPSFVRSGLMKEALHTVREY--ILQPDSKVDRSSVHSLMEGILKRDGTEK-SIEFAEN 721
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
L D + +++ C + A EL+ + EN GV + T +Y ++ L +
Sbjct: 722 IASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDL 781
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISY 275
+ AE L+SEM++ G D D Y++ + G R+++++ +EM + G K ++Y
Sbjct: 782 IDIAEELFSEMKRLGCDPDEFTYHLILDAM--GKSMRIEDMLKIQEEMHNKGYKSTYVTY 839
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N +++ K++M+DEA +Y L G SP T+ + L GN + A +F E +
Sbjct: 840 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 899
Query: 336 VHKIPDFNTVKLLVEG 351
P+ +L+ G
Sbjct: 900 CGCEPNCAIYNILLNG 915
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 110/260 (42%), Gaps = 17/260 (6%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD 80
T ++I KSK+ D+A+++Y + SP Y L L K D
Sbjct: 837 VTYNTIISGLVKSKML-----DEAINLYYQLMSEGFSPTPCTYGPLLD--GLLKDGNIED 889
Query: 81 IETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
E L + +P L N Y AG + F+ M E G + S+
Sbjct: 890 AEALFDEMLECGCEPNCAIYNILLN---GYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 138 LL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
++ C RL D + F ++ L PD I+Y LL+ SG ++AL L N+ME
Sbjct: 947 VIDTLCADGRLNDGLS-YFKQL-TDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEK 1004
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPER 255
KG+ TY +++ L K G A EA +++ E+ KG +V YN I + G PE
Sbjct: 1005 KGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPEN 1064
Query: 256 LKELIDEMRDAGLKPDTISY 275
M G +P++ +Y
Sbjct: 1065 AFAAYGRMIVGGCRPNSSTY 1084
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 6/198 (3%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+++H G + +L M+ + ++ T+ TV + +G A M++ G
Sbjct: 110 LMRAHGRVGDVAQVFDL---MQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 234 VDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ L+ YN + G D E + ++ M G+ P +Y+ LM + K +
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAM-DVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ +E G PN ++ I L +G ++AY++ ++ PD T +L++
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285
Query: 352 LVKKKKIKEAKGVIRTIK 369
L ++ +AK V +K
Sbjct: 286 LCDAGRLADAKDVFWKMK 303
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 119/295 (40%), Gaps = 37/295 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +AG + A + F ++ E+ + ++N LL R +V L + +
Sbjct: 526 SLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN 585
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ I+Y +L C +G + AL++L M G +Y TV+ L K+ +E
Sbjct: 586 -SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDE 644
Query: 222 AERLWSEMEK-----------------KGVDLDVAAYNVR--------------ITNTYG 250
A ++ +M+K + + A + VR + +
Sbjct: 645 AFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLME 704
Query: 251 G-----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E+ E + + +GL D + + ++ CK++ A ++ + E G S
Sbjct: 705 GILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSL 764
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
++ I L D A ++F E + PD T L+++ + K +I++
Sbjct: 765 KTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 819
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 77/179 (43%), Gaps = 9/179 (5%)
Query: 36 RSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKIT 95
R D +K +++ S+ + +P Y + + L R +D + K +
Sbjct: 917 RIAGDTEKVCELFESMVEQGMNPDIKSYT--VVIDTLCADGRLNDG---LSYFKQLTDMG 971
Query: 96 QEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
EP L LI G++G + A+ ++ M++ G ++ ++N+L+ ++ +
Sbjct: 972 LEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAG 1031
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+++E+ K P+ +Y L++ + SGS + A M G + TY + N
Sbjct: 1032 KMYEELLAK-GWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELG 127
+R A+ R +L++ K++ + + L N+ I +G+AG D A + F +M G
Sbjct: 242 IRVFAREGRVDAALSLLDEMKSNS-LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANG 300
Query: 128 TPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+++ +++ C RL + V LF+ + + + P +Y ++ + +G +
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVE-LFEHMDQNKQV-PCAYAYNTMIMGYGMAGKFED 358
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A LL KG + V+Y +L+CL ++G +EA + + EM+K + +++ YN+ I
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMID 417
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E + D M+DAGL P+ I+ N ++ CK + +D+A ++EGL+ C P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+A T+ + I L G D+AYK++++ + ++IP+ L+ K
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 157/368 (42%), Gaps = 43/368 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A I+ + P + Y + L + R + L E + +I
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCS--LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR++ + G + + +++M LG ++ N + ++ +K LF EI K
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEI-KN 577
Query: 162 YNLSPDKISYGLLLKS-----------------------------------HCDSGSSDK 186
PD SY +L+ C SG +K
Sbjct: 578 LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNK 637
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A +LL EM+ KG E T VTY +V++ L K +EA L+ E + KG++L+V Y+ I
Sbjct: 638 AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID 697
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G R+ E +++E+ GL P+ ++N L+ K E + EA ++ +++ C
Sbjct: 698 GF--GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+PN T+ I+ LC F+KA+ ++E P+ T ++ GL K I EA
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 364 VIRTIKKK 371
+ K+K
Sbjct: 816 LFEKFKEK 823
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 7/315 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R ++ L E + ++ +I YG AG F+ A ++ G S
Sbjct: 315 LCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPS 374
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+S+N +L R D+ F+E+ K + P+ +Y +++ C +G + AL +
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMKK--DAIPNLSTYNIMIDMLCKAGKLETALVVR 432
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+ M++ G+ +T +++ L K ++A ++ ++ K D Y I G
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL--G 490
Query: 252 DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
R+ E L ++M DA P+ + Y L+ + K ++ K+Y + GCSP+
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T++ + +G +K +F+E + IPD + +L+ GLVK EA + T+
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610
Query: 369 KKKFPPNVLRAWKKV 383
K++ RA+ V
Sbjct: 611 KEQGCVLDTRAYNTV 625
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 159/336 (47%), Gaps = 15/336 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI-TQEPYL 100
++A++++ + ++ P + YA + + + +F D +L+E + I + Y
Sbjct: 322 NEAVELFEHMDQNKQVPCA--YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYN 379
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIP 159
C ++ G+ G D A++ F++M + P ++ ++N ++ C +L + ++ +
Sbjct: 380 C-ILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKL--ETALVVRDAM 435
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K L P+ I+ +++ C + D A + +++K VTY +++ L + G
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA +L+ +M + Y I N + G E ++ +EM G PD + N
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M C K +++ + +++ ++ G P+A ++ I+ L +G +AY++F KE
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGC 615
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V +NTV ++G K K+ +A ++ +K K
Sbjct: 616 VLDTRAYNTV---IDGFCKSGKVNKAYQLLEEMKTK 648
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 136/310 (43%), Gaps = 14/310 (4%)
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+R D+ + + ++T + C +Y M R F+ ++++ S+ F
Sbjct: 105 RRLKDVNNAVNYFRWAERLTDRAH-CR--EAYNSLLMVMARTRKFNCLEQILEEMSIAGF 161
Query: 136 N-------ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++ + +SR + F + +K P +Y L+ + S SD L
Sbjct: 162 GPSNNTCIEIVLSFIKSRKL-REAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
L +M+ G V +TT++ ++G + A L EM+ ++ DV YNV I +
Sbjct: 221 TLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCI-DC 279
Query: 249 YG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+G G + + EM+ GL D ++Y ++ CK + ++EA +++E +++N P
Sbjct: 280 FGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A + T I +G F+ AY + + IP + ++ L +K ++ EA
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 367 TIKKKFPPNV 376
+KK PN+
Sbjct: 400 EMKKDAIPNL 409
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LAK R + L E K+ +LI +G+ G D A +++ + G +
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V ++N LL A ++ + + F + K +P+ I+Y +L+ C +KA
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSM-KDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
EM+ +G + TYTT+++ L K GN EA+ L+ + ++KG D A YN I
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842
Query: 252 D-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ L +E R G T + L+ K E +++A V L E + +A
Sbjct: 843 NRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAA-- 900
Query: 311 RTW 313
R+W
Sbjct: 901 RSW 903
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 42/317 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A F M E G ++N ++ +S +K L +E+ K
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++YG ++ D+A L E ++KG+E+ V Y+++++ K G +EA
Sbjct: 650 H-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--------ERLKEL--------------- 259
+ E+ +KG+ +V +N + + + +K+L
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768
Query: 260 -------------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
EM+ G KP+ +Y +++ K + EA ++E +E G +
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK---G 363
+ + I L + AY++F+E+ + T +L++ L K + I++A
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGA 888
Query: 364 VIRTIKKKFPPNVLRAW 380
V+R K + R+W
Sbjct: 889 VLRETAK--AQHAARSW 903
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 13/354 (3%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIETL 84
IS A ++ E DP AL+I++ VS+ ++ YA L +LA+ F ++ +
Sbjct: 91 ISHDSAIDLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILD--KLARCNNFHAVDRV 148
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD----ELGTPRSVISFNALLF 140
+ + E NL++ + ++ + + + + + E +P+++ + LL
Sbjct: 149 LHQMTYETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLL 208
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
R L K L + P+ + +L+K HC +G D A E++ EM N
Sbjct: 209 DSNRVDLARK---LLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFS 265
Query: 201 V-TTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAYNVRITN-TYGGDPERLK 257
VTY+T+++ L + G +EA L+ EM + + D YNV I GG P+R +
Sbjct: 266 YPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRAR 325
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+I M+ G P+ +Y+ L+ CK +++AK V ++ +G P+A T+ + I L
Sbjct: 326 NVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFL 385
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
C +G D+A ++ +E D T +L+ GL ++ K +EA ++ + ++
Sbjct: 386 CRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQ 439
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 8/300 (2%)
Query: 40 DPDKALDIYSSV-SKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP 98
D D A +I + + ++ P Y+ + L ++ R + L E + I +P
Sbjct: 248 DLDSAFEIVEEMRNSEFSYPNLVTYST--LMDGLCRNGRVKEAFDLFEEMVSRDHIVPDP 305
Query: 99 YLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
N LI + + G D A M G +V +++AL+ C +L D +L
Sbjct: 306 LTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVL-A 364
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
EI K L PD ++Y L+ C +G SD+A+ELL EM+ G + +VT+ +L L ++
Sbjct: 365 EI-KGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCRE 423
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
G EEA + ++ ++GV L+ +Y + + + T + +R KEL+ M G +P +
Sbjct: 424 GKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATS 483
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ C CK M+D+A L E G P T+ I +C +++ E V+
Sbjct: 484 NELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDELVV 543
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 164/328 (50%), Gaps = 11/328 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLC 101
+AL+++ + + P +Y+ + + K+ RF D +E + PK ++
Sbjct: 432 EALEMFDEMKQKGIVP--EQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVL 489
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
I YG++G A++ ++ M G V++ NA+LF +S +F E+ K
Sbjct: 490 -FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL-KA 547
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD I+Y +++K + D+A+++ +M + ++++ LYK G +E
Sbjct: 548 MGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDE 607
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A +++ ++++ ++ YN + G ++KE L++EM + P+ I+YN +
Sbjct: 608 AWQIFYQLKEMNLEPTDGTYNTLLAGL--GREGKVKEVMHLLEEMYHSNYPPNLITYNTI 665
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C CKN +++A + + GC P+ +++ T IY L +++A+ +F + V
Sbjct: 666 LDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV-L 724
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
IPD+ T+ ++ VK +KEA +I+
Sbjct: 725 IPDYATLCTILPSFVKIGLMKEALHIIK 752
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 153/315 (48%), Gaps = 7/315 (2%)
Query: 67 LTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ ++ L + R SD + + + K+D K + Y+ L+ + G M ++ M
Sbjct: 349 VLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYI-TLLDKFADNGESQSVMEIWNAMKA 407
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G +V+++ A++ A C R+++ + +FDE+ +K + P++ SY L+ +
Sbjct: 408 DGYNDNVVAYTAVIDALCQVGRVFEALE-MFDEMKQK-GIVPEQYSYNSLISGFLKADRF 465
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-V 243
ALEL M+ G + T+ +N K G + +A + + M+ KG+ DV A N V
Sbjct: 466 GDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAV 525
Query: 244 RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G K + E++ G+ PDTI+Y ++ C K DEA K++ + EN C
Sbjct: 526 LFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNC 585
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ + I L +G D+A+++F + ++ P T L+ GL ++ K+KE
Sbjct: 586 VPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMH 645
Query: 364 VIRTI-KKKFPPNVL 377
++ + +PPN++
Sbjct: 646 LLEEMYHSNYPPNLI 660
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+LC LI+ + A + G S+N+L+ L D LF E+
Sbjct: 801 FLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEM 860
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ PD+ +Y LLL + S ++ L++ EM KG E T VTY T+++ L K
Sbjct: 861 -KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRR 919
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E+A L+ + +G Y + G E + L +EM + G K + YN
Sbjct: 920 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 979
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + ++ +++ + + G +P+ ++ I LC +G + F++ + +
Sbjct: 980 LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG 1039
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T LL++GL K K+++EA + ++KK PN+
Sbjct: 1040 LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNL 1079
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
++ L K K+ + L++ K+ + +LI + D A F +M ELG
Sbjct: 806 IKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGC 865
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++N LL A +S +++ + +E+ +K ++Y ++ S ++A+
Sbjct: 866 GPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRK-GYESTYVTYNTIISGLVKSRRLEQAI 924
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-N 247
+L + ++G T TY +L+ L K G E+AE L++EM + G + YN+ + +
Sbjct: 925 DLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGH 984
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ E++ L +M D G+ PD SY ++ CK +++ + L E G P+
Sbjct: 985 RIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDL 1044
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIR 366
T+ I L S ++A +F E +P+ T L+ L K K EA K
Sbjct: 1045 ITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEE 1104
Query: 367 TIKKKFPPNVL 377
+ K + PNV
Sbjct: 1105 LLTKGWKPNVF 1115
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 2/250 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G++ + ++ ++M G + +++N ++ +SR ++ L+ + +
Sbjct: 875 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ- 933
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP +YG LL +G + A L NEM G + Y +LN GN E+
Sbjct: 934 GFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKV 993
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M +G++ D+ +Y + I T G ++ + GL+PD I+YN L+
Sbjct: 994 CHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 1053
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K++ ++EA ++ +++ G PN T+ + I HL +G +A K+++E + P+
Sbjct: 1054 LGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPN 1113
Query: 342 FNTVKLLVEG 351
T L+ G
Sbjct: 1114 VFTYNALIRG 1123
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 54/343 (15%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI------ESH 88
++S FD + AL++Y + P Y +V +A KR D+ET++ E+H
Sbjct: 250 VKSGFDRE-ALEVYKVMMVDGVVPSVRTY----SVLMVAFGKR-RDVETVLWLLREMEAH 303
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
P + +C IR GQA FD A R +M+ G
Sbjct: 304 GVKPNVYSYT-IC--IRVLGQARRFDEAYRILAEMENEGC-------------------- 340
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
PD I++ +L++ CD+G A ++ +M+ + VTY T
Sbjct: 341 ----------------KPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 384
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDA 266
+L+ G ++ +W+ M+ G + +V AY I G E L E+ DEM+
Sbjct: 385 LLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL-EMFDEMKQK 443
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G+ P+ SYN L++ + K + +A ++++ ++ +G PN T +I + SG KA
Sbjct: 444 GIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKA 503
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ ++ +PD ++ GL K ++ AK V +K
Sbjct: 504 IQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELK 546
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 133/289 (46%), Gaps = 8/289 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
+ +L + + KS R ++ + E H+ + T Y +I ++ + A+ +
Sbjct: 870 FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTY-NTIISGLVKSRRLEQAIDLYY 928
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+ G + ++ LL ++ + LF+E+ +Y + Y +LL H +
Sbjct: 929 NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM-LEYGCKANCTIYNILLNGHRIA 987
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G+++K L +M ++G+ +YT +++ L K G + + ++ + G++ D+ Y
Sbjct: 988 GNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITY 1047
Query: 242 NVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N+ I G +RL+E L +EM+ G+ P+ +YN L+ K EA K+YE L
Sbjct: 1048 NLLIDGL--GKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEEL 1105
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
G PN T+ I SG+ D AY + ++ +P+ +T +
Sbjct: 1106 LTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 5/285 (1%)
Query: 94 ITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV- 151
I E Y N LI + +A F A+ F MD G + + +LF + + +
Sbjct: 445 IVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPN--GYTHVLFINYYGKSGESIK 502
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
I E+ K + PD ++ +L SG A + +E++ GV T+TYT ++
Sbjct: 503 AIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIK 562
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
C K +EA +++ +M + DV N I Y G + ++ ++++ L+P
Sbjct: 563 CCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEP 622
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+YN L+ + + E + E + + PN T+ T + LC +G + A +
Sbjct: 623 TDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDML 682
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
IPD ++ ++ GLVK+++ EA + +KK P+
Sbjct: 683 YSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPD 727
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 142/346 (41%), Gaps = 10/346 (2%)
Query: 35 LRSEFDPDKALDIYSSVSKH---YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND 91
LRS P +AL+ + S ++ + S Y DL + R D+ + + +
Sbjct: 143 LRSADGPAEALERFRSAARRPRVVHTTASCNYMLDL----MRDHGRVGDMAEVFDVMQRQ 198
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+ G G A M E G + ++N L++ +S +D+
Sbjct: 199 IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSG-FDRE 257
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ ++ + P +Y +L+ + + L LL EME GV+ +YT +
Sbjct: 258 ALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 317
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
L + +EA R+ +EME +G DV + V I G K++ +M+ + KP
Sbjct: 318 VLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 377
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y L+ + N +++ ++ +G + N + I LC G +A ++F
Sbjct: 378 DRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 437
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PN 375
E +P+ + L+ G +K + +A + + + P PN
Sbjct: 438 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPN 483
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 136/295 (46%), Gaps = 10/295 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ ALD+ S++ P S Y + + L K +R+++ ++ K I LC
Sbjct: 676 NDALDMLYSMTTKGCIPDLSSY--NTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLC 732
Query: 102 NLIRSYGQAGMFDHAMRTFDQ-MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++ S+ + G+ A+ + + G+ S ++L+ + +K I F EI
Sbjct: 733 TILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEK-SIEFAEIIA 791
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ D L+K C + +A EL+ + ++ GV + T +Y +++ L + +
Sbjct: 792 SSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLID 851
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNF 277
AE L++EM++ G D YN+ + G R++E++ +EM G + ++YN
Sbjct: 852 IAEGLFAEMKELGCGPDEFTYNLLLDAM--GKSMRIEEMLKVQEEMHRKGYESTYVTYNT 909
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+++ K+ +++A +Y L G SP T+ + L +G + A +F E
Sbjct: 910 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 964
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 103/269 (38%), Gaps = 39/269 (14%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A+D+Y ++ SP Y L L K+ R D E L
Sbjct: 921 EQAIDLYYNLMSQGFSPTPCTYGPLLD--GLLKAGRIEDAENLFNEMLEYGCKANCTIYN 978
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
L+ + AG + F M + G + S+ ++ C +L D + +
Sbjct: 979 ILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL-- 1036
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ L PD I+Y LL+ S ++A+ L NEM+ KG+ TY +++ L K G A
Sbjct: 1037 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1096
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
EA +++ E+ K G KP+ +YN L+
Sbjct: 1097 EAGKMYEELLTK----------------------------------GWKPNVFTYNALIR 1122
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATT 309
Y + D A Y + GC PN++T
Sbjct: 1123 GYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 143/293 (48%), Gaps = 14/293 (4%)
Query: 72 LAKSKRFSDIETLIES---HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L KS R + L+E+ K P + LI Y + G A + ++M + GT
Sbjct: 218 LCKSYRMEEARQLLETMVKRKVRPNLVTYN---TLIYGYCKTGCTGLAHQLIERMIQSGT 274
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
V++FN+L+ C +S++ +L + KK +P+ ++Y +L+ CD+G +++A
Sbjct: 275 HPDVVTFNSLISGFCQKSKIDKACEVL--HLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
ELL+EM+ +G+ +TY +++ + E+A ++ + M ++GV D +Y
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
ER E L+D M DAG P+ ++N LM C + +DEA+ + + GC
Sbjct: 393 LL--KSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCD 450
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
P A+T+ + LC +G D A +V V P ++ +V L ++ K
Sbjct: 451 PAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGK 503
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 132/269 (49%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +A A + ++M E G V+++N+L+ +S ++ L + + K+
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKR- 237
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y L+ +C +G + A +L+ M G VT+ ++++ ++ ++A
Sbjct: 238 KVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKA 297
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M+K ++ YNV I+ G EL+ EM G+ PD I+YN L+
Sbjct: 298 CEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGI 357
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+N +++A ++ + E G P+ ++ T L S FD+A+ + IP+
Sbjct: 358 FCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN 417
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T L+EGL +++ EA+ ++ +++
Sbjct: 418 LFTFNSLMEGLCCSRRLDEARHLLAVMRR 446
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 121/244 (49%), Gaps = 4/244 (1%)
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
N LL ++R + + +F + + + I+Y L+ C +G ++A +LL EM+
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-E 254
+G VT+++++ L GN A + + E + D +N+ + +
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPD--SVLFNILVHGLCKANQLS 190
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+++I+EM + G+ PD ++YN L+ CK+ M+EA+++ E + + PN T+ T I
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLI 250
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-P 373
Y C +G A+++ + + PD T L+ G +K KI +A V+ +KK
Sbjct: 251 YGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCA 310
Query: 374 PNVL 377
PN++
Sbjct: 311 PNLV 314
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 137/301 (45%), Gaps = 2/301 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ V L K+ + S+ +IE + +LI ++ + A + + M +
Sbjct: 177 NILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVK 236
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
+++++N L++ ++ L + + + PD +++ L+ C D
Sbjct: 237 RKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQS-GTHPDVVTFNSLISGFCQKSKID 295
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
KA E+L+ M+ VTY +++ L G A EA L SEM+ +G+ D+ YN I
Sbjct: 296 KACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLI 355
Query: 246 -TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
E+ ++ + M + G+ PD ISY L K+E DEA + + + + G
Sbjct: 356 GIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAI 415
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PN TF + + LC S D+A + V P +T ++LV GL K ++ +AK V
Sbjct: 416 PNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEV 475
Query: 365 I 365
+
Sbjct: 476 L 476
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 205 TYTTVLNCLYKQGNAEEAERLW-SEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDE 262
T +L L K +A +++ E+ + D + YN I GD ER +L+ E
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M++ G PD ++++ ++ C + A + + E C+P++ F ++ LC +
Sbjct: 131 MKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLCKANQ 188
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
+A ++ +E +PD T L++GL K +++EA+ ++ T +K+K PN++
Sbjct: 189 LSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 5/332 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL I+S++ S S + + L +S R D L + + + +
Sbjct: 93 ALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSF 152
Query: 104 IR-SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
+ S AG+ D A+ + + G ++N LL R R D V LF+ +
Sbjct: 153 VAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVA-LFESWIQD 211
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD S+ +++K C G+ KALEL+ M G T+T+ +++ L +
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNR 271
Query: 222 AERLWSEMEKKGVDL-DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
L +++ GV + +V Y I+ G E + ++M ++G +P+T++YN L+
Sbjct: 272 GHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLI 331
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K M+ A ++Y L C P+ TF + I C G D A +++KE H
Sbjct: 332 NGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQ 391
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T +++ L K+ + EA G +R + +
Sbjct: 392 PNVYTFSIIIHSLCKQNRSAEALGFLRELNMR 423
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 140/343 (40%), Gaps = 42/343 (12%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFD 121
YA + + L R D L ES D + + + N+ I+ + G F A+ +
Sbjct: 183 YAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVE 242
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M E G I+ N L+ R++ ++ L + + P+ ++Y ++ +C +
Sbjct: 243 RMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKA 302
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNC------------LYKQ------------- 216
G + AL + N+M G TVTY ++N +Y+Q
Sbjct: 303 GRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTF 362
Query: 217 ----------GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRD- 265
G ++A R+W EM + + +V +++ I + + R E + +R+
Sbjct: 363 SSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQN--RSAEALGFLREL 420
Query: 266 ---AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
A + P T YN ++ CK ++EA + +EE GC P+ T+ I C G
Sbjct: 421 NMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGR 480
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A +F + V PD TV + ++K E ++
Sbjct: 481 IPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
P LC LI +AG D + + G I+F LL C R D + I
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVL 210
+ + + P+ SY LL CD S +ALELL+ M + G V+YTTV+
Sbjct: 145 VLRRM-TELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-----ERLKE------- 258
N +K+G++++A + EM +G+ DV Y+ I G KE
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESE 263
Query: 259 -LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L D M G+KPD I+Y+ L+ YC MDEA K+ G+ G PN T+ T I
Sbjct: 264 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 323
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C + A +FKE PD T ++++GL + ++ AK
Sbjct: 324 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 368
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 136/271 (50%), Gaps = 14/271 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK------------ 150
+I + + G D A T+ +M + G V+++++++ A + + DK
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIE 261
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
LFD + + + PD I+Y L+ +C +G D+A++LL+ M + G++ TVTY+T++
Sbjct: 262 SEKLFD-LMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLK 269
N K E+A L+ EME GV D+ YN+ + + KEL + ++G +
Sbjct: 321 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 380
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
+ +YN ++ CKN++ D+A ++++ L A TF I L G D+A +
Sbjct: 381 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 440
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
F +P++ T +L+ E ++ + ++E
Sbjct: 441 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 471
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 107/230 (46%), Gaps = 10/230 (4%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNL 164
S+ + G + + FD M +G +I+++ L+ C ++ + + +L + L
Sbjct: 252 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMV--SVGL 309
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
P+ ++Y L+ +C + AL L EME+ GV +TY +L L++ A+
Sbjct: 310 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 369
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK----ELIDEMRDAGLKPDTISYNFLMT 280
L+ + + G ++++ YN+ + +G +L ++ + LK + ++N ++
Sbjct: 370 LYVRITESGTQIELSTYNIIL---HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 426
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
K DEAK ++ NG PN T+R ++ G G ++ ++F
Sbjct: 427 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 476
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 52/250 (20%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT---------------- 207
++PD +YG+L+ C +G D L + KG V +T+T
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 208 --------------------TVLNCLYKQGNAEEAERLWSEM---EKKGVDLDVAAYNVR 244
+LN L + ++EA L M G DV +Y
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD------------EA 291
I + GD ++ EM D G+ PD ++Y+ ++ CK + MD E+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIES 262
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+K+++ + G P+ T+ T I C +G D+A K+ V V P+ T L+ G
Sbjct: 263 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 322
Query: 352 LVKKKKIKEA 361
K ++++A
Sbjct: 323 YCKISRMEDA 332
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 4/221 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y AG D AM+ M +G + ++++ L+ C SR+ D + +LF E+ +
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL-VLFKEM-ES 341
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD I+Y ++L+ + + A EL + G ++ TY +L+ L K ++
Sbjct: 342 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 401
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +++ + + L+ +N+ I G + K+L GL P+ +Y +
Sbjct: 402 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 461
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+++E +++ +E+NGC+ ++ + L G
Sbjct: 462 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 502
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 154/322 (47%), Gaps = 14/322 (4%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ V L K +F D+++ + + + LI +Y + G+ + A +
Sbjct: 119 YTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178
Query: 123 MDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M + G S+ ++NA++ C + R IL + + LSPD +Y LL C
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML--NIGLSPDTTTYNTLLVESCRR 236
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+ +A E+ EM +GV V++++++ + + ++A + +M+K G+ D Y
Sbjct: 237 DNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296
Query: 242 NVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
V + + Y G E LK + DEM + G D I+YN ++ CK +M+ +A K+++ +
Sbjct: 297 TV-LMHGYCRNGNMLEALK-IRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E G P+ TF T I+ C GN KA +F + PD L++G K ++
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414
Query: 359 KEAK----GVIRTIKKKFPPNV 376
++A G+I +K FP ++
Sbjct: 415 EKASELWDGMIS--RKIFPNHI 434
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G A++ D+M E G VI++N +L + ++ LFDE+ ++
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD ++ L+ HC G+ KAL L M + ++ V Y T+++ K G E+A
Sbjct: 359 AL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
LW M + + + Y + I N Y G L D M + G+KP ++ N ++
Sbjct: 418 SELWDGMISRKIFPNHITYGILI-NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 476
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY----KVFKESVMV 336
YC++ +A + + G +P+ ++ T I N DKA+ K+ KE ++
Sbjct: 477 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLL- 535
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
PD T +++ G ++ +++EA+ V+R I+K P+
Sbjct: 536 ---PDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPD 572
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 38/302 (12%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
F A F +M G ++SF++L+ +R+R D+ + F ++ KK+ L PD + Y
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDM-KKFGLVPDNVIYT 297
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ +C +G+ +AL++ +EM +G + + Y T+LN L K+ +A++L+ EM ++
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357
Query: 233 G-----------------------------------VDLDVAAYNVRITN-TYGGDPERL 256
G + D+ AYN I G+ E+
Sbjct: 358 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 417
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
EL D M + P+ I+Y L+ YC + EA ++++ + E G P T T I
Sbjct: 418 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKG 477
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
C SG+ KA + + PD + L+ G V++ + +A I ++K+ P+
Sbjct: 478 YCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPD 537
Query: 376 VL 377
++
Sbjct: 538 II 539
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 2/279 (0%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A + + L K K +D + L + + LI + Q G A+ F M
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+ ++++N L+ + +K L+D + + + P+ I+YG+L+ ++C G
Sbjct: 390 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR-KIFPNHITYGILINAYCSVGH 448
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+A L + M KG++ T VT TV+ + G++ +A+ M KGV D +YN
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 244 RITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I D ++ I++M GL PD I+YN +M +C+ M EA+ V + E G
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+P+ +T+ I N ++A++ E + PD
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
M A + FD+M E G +F L+ + K LF + ++ N+ PD ++Y
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR-NIKPDIVAY 401
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C G +KA EL + M ++ + +TY ++N G+ EA RLW M +
Sbjct: 402 NTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIE 461
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
KG+ + N I GD + E + M G+ PD ISYN L+ + + + MD+
Sbjct: 462 KGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDK 521
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A +E+ G P+ T+ + C G +A V ++ + PD +T L+
Sbjct: 522 AFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALIN 581
Query: 351 GLVKKKKIKEA 361
G V + + EA
Sbjct: 582 GHVTQDNLNEA 592
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI- 245
A E+ E+ G+E+ T ++N L K G ++ + SEME G+ D+ YN I
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIG 161
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E E+++ M D GLKP +YN ++ CK AK + + G SP
Sbjct: 162 AYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSP 221
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ TT+ T + C NF +A ++F E + +PD + L+ + + + +A
Sbjct: 222 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYF 281
Query: 366 RTIKK--KFPPNVL 377
R +KK P NV+
Sbjct: 282 RDMKKFGLVPDNVI 295
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 6/174 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y G A R +D M E G ++++ N ++ RS K + K
Sbjct: 439 LINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK- 497
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++PD ISY L+ + DKA +N+ME +G+ +TY V+N +QG +EA
Sbjct: 498 GVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEA 557
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTI 273
E + +M +KG++ D + Y I D L E DEM G PD +
Sbjct: 558 ELVLRKMIEKGINPDRSTYTALINGHVTQD--NLNEAFRFHDEMLQRGFAPDDV 609
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 101/217 (46%), Gaps = 2/217 (0%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N + + + LL++++ + + E + +KG V+ ++L L K E A
Sbjct: 43 NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ E+ + G++L+V N+ + G + +K + EM G+ D ++YN L+
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ +++EA ++ + + G P+ T+ I LC G + +A + E + + PD
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L+ ++ EAK + +++ P+++
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLV 259
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 162/361 (44%), Gaps = 44/361 (12%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
IYS++ K P + + ++ ++ L K+ R L+ + E LI S
Sbjct: 168 IYSNMKKDGMEP--NVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISS 225
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+ G A ++ TP SV +NAL+ + +++ L DE+ K + P
Sbjct: 226 LCKLGKVKEA----RELAMSFTP-SVPVYNALINGVCKEYTFEEAFQLLDEMMNK-GIDP 279
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ISY ++ + D+G+ + +L +L +M +G T+T+++ + +G + EA W
Sbjct: 280 NVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFW 339
Query: 227 SEMEKKGVDLDVAAYN---------------VRITN------------TY---------G 250
M ++GV +V AYN V + N TY
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
GD + E+ + M G P+ ++Y ++ C+N M ++A + E ++ C PN TF
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T+I LCGSG D A KVF + P+ T L++ L+K ++ EA G+++ ++
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519
Query: 371 K 371
+
Sbjct: 520 R 520
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 182/417 (43%), Gaps = 81/417 (19%)
Query: 34 KLRSEFDPDKALDIYSSVS-----KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
+L+ E D AL+ + S++ KH +P++ + + + +LA + ++ L++
Sbjct: 49 RLKHEHDITLALEYFKSIANSKSFKH--TPLTYQ----MMIEKLASEREMDCVQYLLQQM 102
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
K + E ++I SY +AG + A++TF +M + +V +N +L A +
Sbjct: 103 KLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF 162
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
+ ++ + KK + P+ +Y +LLK+ C + D A +LL EM +KG + V+YTT
Sbjct: 163 QMINPIYSNM-KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 209 VLNCLYKQG-------------------NA-----------EEAERLWSEMEKKGVDLDV 238
+++ L K G NA EEA +L EM KG+D +V
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNV 281
Query: 239 AAY-----------NVRIT----------------NTY----------GGDPERLKELID 261
+Y NV ++ +T+ GG E L + D
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL-DFWD 340
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M G+ P+ ++YN LM C + +A V+ +E NGC PN T+ I +G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+ D A +V+ + P+ +V+ L + +A +I ++ + PPN +
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTV 457
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG D A ++ M G +V+++ ++ R+ ++++ L + + +
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVE- 450
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N P+ +++ +K C SG D A+++ ++M N G T TY +L+ L K EA
Sbjct: 451 NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA 510
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYNFL 278
L +ME +G++L++ YN I YG G EL+ +M G KPD I+ N +
Sbjct: 511 FGLVKDMEHRGIELNLVTYNTII---YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YCK ++ A ++ + L P+ + + I +C ++A + +
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627
Query: 339 IPDFNTVKLLVEGL 352
P+ T +LV L
Sbjct: 628 SPNVATWNVLVRHL 641
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI+ + G A+ +D+M G +V+++NAL+ C++ L D V + F+++
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV-FNQMEI 379
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P+ +Y L+ + +G D A E+ N M G V YT +++ L +
Sbjct: 380 N-GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A L M+ + + +N I G G + ++ D+M ++G P+T +YN L+
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K+ EA + + +E G N T+ T IY C +G +A ++ + V+
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
PD TV ++++ K+ K+ A ++ R K+ P+++
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D A ++++ + H P + A V L ++ F+ LIE+ + +
Sbjct: 401 DLDGASEVWNWMITHGCHP--NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
I+ +G D A++ FDQM G + ++N LL + + R + + L ++
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-- 217
+ + + ++Y ++ +C +G +ALELL +M +G + +T V++ KQG
Sbjct: 519 HR-GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Query: 218 ---------------------------------NAEEAERLWSEMEKKGVDLDVAAYNVR 244
EEA M +G+ +VA +NV
Sbjct: 578 NIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVL 637
Query: 245 ITNTY 249
+ + +
Sbjct: 638 VRHLF 642
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 153/330 (46%), Gaps = 39/330 (11%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L K K+F + +L+E+ + ++++ + ++R Y +A A+ TF++M G
Sbjct: 161 IEALGKIKQFRLVWSLVEAMRCRSCLSKDTFKI-IVRRYARARKVKEAVETFEKMSSFGL 219
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKK--------------------------- 161
+ +N L+ ++S+ K +F E+ +K
Sbjct: 220 KTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLK 279
Query: 162 --------YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ PD ++YG+L+ + C SG D+A+++ +EME G + Y ++N L
Sbjct: 280 AVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGL 339
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPD 271
+EA + + ++ G ++V N + Y E +++DEMR +G+ P+
Sbjct: 340 GSMERLDEALKYFQLSKESGFPMEVPTCNA-VIGAYCRALEFHHAFKMVDEMRKSGIGPN 398
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T +Y+ ++ K+E ++EA +++ +E +GC P T+ + C + D A KV+K
Sbjct: 399 TRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWK 458
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ +P + L+ GL + +++EA
Sbjct: 459 QMKEKGVLPCMHMFSALINGLCFENRLEEA 488
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 130/259 (50%), Gaps = 11/259 (4%)
Query: 94 ITQEPYL-CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+T P L ++++ AG+ A + + + G S F+ L+ A + + + V
Sbjct: 116 VTVSPQLVAEVLKNLSNAGILALAFFRWAERQQ-GFRYSAEGFHNLIEALGKIKQFRLVW 174
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L + + + LS D ++ ++++ + + +A+E +M + G++ Y +++
Sbjct: 175 SLVEAMRCRSCLSKD--TFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDI 232
Query: 213 LYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLK 269
L K ++A ++ EM++KG + D+ Y V + +G + + LK + EM DAG+K
Sbjct: 233 LSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTV-LMEGWGHEKDLLMLKAVYQEMLDAGIK 291
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PD ++Y L++ +CK+ DEA KV+ +EE+GC P+ + I L D+A K
Sbjct: 292 PDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKY 351
Query: 330 F---KESVMVHKIPDFNTV 345
F KES ++P N V
Sbjct: 352 FQLSKESGFPMEVPTCNAV 370
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + + P Y + + L +R + + K + P
Sbjct: 311 DEAIKVFHEMEESGCMPSPHVYC--MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCN 368
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I +Y +A F HA + D+M + G + +++ +L +S ++ LF + +
Sbjct: 369 AVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERD 428
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +Y +++ C + D AL++ +M+ KGV ++ ++N L + EE
Sbjct: 429 -GCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEE 487
Query: 222 AERLWSEMEKKGV 234
A + EM KG+
Sbjct: 488 ACVYFQEMLDKGI 500
>gi|297604045|ref|NP_001054898.2| Os05g0207200 [Oryza sativa Japonica Group]
gi|218196267|gb|EEC78694.1| hypothetical protein OsI_18845 [Oryza sativa Indica Group]
gi|222630569|gb|EEE62701.1| hypothetical protein OsJ_17504 [Oryza sativa Japonica Group]
gi|255676129|dbj|BAF16812.2| Os05g0207200 [Oryza sativa Japonica Group]
Length = 467
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNL 164
+ +G D+A FD+M + G +V++F L+ A C RL + + + + +YN+
Sbjct: 165 AVADSGSVDNACLLFDEMLQRGIAPTVVTFGTLVTAFCEAGRLEEAFKVK-EVMSLQYNI 223
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
P+ Y L+K+ C+ G D A L EM N V + Y T+ L++ G E
Sbjct: 224 RPNAHVYASLMKALCEKGKVDDAHRLKEEMVSNSEPLVDSGAYATLARALFRLGKKGEVV 283
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM++KG+ + +N I GD + +D+M+ G KPD++SYN L+
Sbjct: 284 SLLEEMKEKGIKVGREVHNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNTLVGG 343
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +A ++ E + GC P+ T+R +C +G F +A +VF E V P
Sbjct: 344 LCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMVFKGFAPS 403
Query: 342 FNTVKLLV 349
+ V+ V
Sbjct: 404 KDGVRKFV 411
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 176/407 (43%), Gaps = 55/407 (13%)
Query: 19 SSTTASSISVSKAKSKLRSEFDPDKALDIY-SSVSKHYASPVSS-----RYA---QDLTV 69
S TA S + LR E DP AL ++ S A P SS RY+ D+ V
Sbjct: 2 SGATAKFSSSYHLAAALRREPDPAAALRLFLSPTPTAAAGPSSSPAPPFRYSLRCYDIIV 61
Query: 70 RRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
+LA ++ F +E+++ + + +EP LC +I +YG+A A R P
Sbjct: 62 CKLAAARLFPAMESVLARLPSSLR-PREPLLCRVISAYGRA-RLPAAARRAFAHPAFPAP 119
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH-CDSGSSDKAL 188
R+ + N LL A R +P L E + + PD +Y +L+++ DSGS D A
Sbjct: 120 RTARALNTLLHALLACRA--PLPELLSEC-RGSGIHPDACTYNILMRAAVADSGSVDNAC 176
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM------------------- 229
L +EM +G+ T VT+ T++ + G EEA ++ M
Sbjct: 177 LLFDEMLQRGIAPTVVTFGTLVTAFCEAGRLEEAFKVKEVMSLQYNIRPNAHVYASLMKA 236
Query: 230 --EKKGVD----------------LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP 270
EK VD +D AY + G + L++EM++ G+K
Sbjct: 237 LCEKGKVDDAHRLKEEMVSNSEPLVDSGAYATLARALFRLGKKGEVVSLLEEMKEKGIKV 296
Query: 271 DTISYNFLMTCYCKNEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
+N ++ +C++E +D A + +++ GC P++ ++ T + LC G + A ++
Sbjct: 297 GREVHNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNTLVGGLCKMGRWRDASEL 356
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
++ PD T + L +G+ EA+ V + K F P+
Sbjct: 357 VEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMVFKGFAPS 403
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 43/329 (13%)
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTR 144
E H DP + + N + GQ + A +QM + G + +FN L+ A CT
Sbjct: 315 EGH--DPDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 145 SRLYDKVPI----------------------------------LFDEIPKKYNLSPDKIS 170
+RL + + + LF+E+ K +PD+++
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVT 428
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ + C G KAL+LL +ME+ G +T+TY T+++ L K+ EEAE ++ +M+
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+G+ + +N I + ELI++M GL+P+ I+YN ++T YCK +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A + E + NG + T+ T I LC +G A KV + + P ++
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 350 EGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+ L ++ I++A + R + + PP+ L
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDAL 637
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 5/314 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALD+ V+ SP Y ++ + L K L E KN E
Sbjct: 373 EEALDLARQVTVKGVSP--DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G A+ M+ G PRS I++N ++ + ++ +FD++ +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + I++ L+ C D A EL+N+M ++G++ +TY ++L KQG+ ++
Sbjct: 491 -GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M G ++DV Y I G + +++ MR G++P +YN ++
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKI 339
+ + +A ++ + E G P+A T++ LC G G +A+ E V I
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669
Query: 340 PDFNTVKLLVEGLV 353
P+F++ ++L EGL+
Sbjct: 670 PEFSSFRMLAEGLL 683
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 158/362 (43%), Gaps = 44/362 (12%)
Query: 33 SKLRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND 91
+ LR + DPD AL + +++++ +P Y + +R+L ++ L+ + +
Sbjct: 46 TALREQPDPDAALRMLNAALARDDFAPGPEVYEE--IIRKLGAVGALDLMKVLVAEMRRE 103
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMR-TFDQMDEL-GTPRSVISFNALLFACTRSRLYD 149
+ + + + SY +FD A+ +Q+ L G + +N LL
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ ++ E+ + + PD +++ L+K+ C + A+ +L EM ++GV T+TT+
Sbjct: 164 LLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-------------------G 250
+ ++G+ E A R+ + M + G NV I N Y G
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI-NGYCKLGRVEDALGYIQQEIADG 281
Query: 251 GDPERLK------------------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+P+++ +++D M G PD +YN ++ C CKN ++EAK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + + GC P+ TTF T I LC ++A + ++ + PD T +L+ L
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401
Query: 353 VK 354
K
Sbjct: 402 CK 403
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 142/292 (48%), Gaps = 25/292 (8%)
Query: 98 PYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTR-----SRLYDK 150
P L N L+ Y AG + +A + F++M G+P +++N + + C + + L D
Sbjct: 341 PSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDL 400
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
V +++E+ + +K++ + C G +KA ++L EM KG T TYT V+
Sbjct: 401 VEKVYEEMLAA-SCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVI 459
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
L + E++ L+ EM++ GV+ DV Y + I + G E+ + DEMR G
Sbjct: 460 TFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCS 519
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ ++Y L+ Y K++ + +A ++ + + C PNA T+ I LC +G KA +V
Sbjct: 520 PNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEV 579
Query: 330 FKESVMVHK----------------IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+++ + P+ T L++GL K +K+ +A ++
Sbjct: 580 YEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELL 631
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 2/237 (0%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F+ D +V+++ AL+ +++ L D + P++I Y L+ C
Sbjct: 596 FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA-GCEPNQIVYDALIDGFC 654
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G D A E+ M G + TYT++++ ++K G + A ++ SEM + +V
Sbjct: 655 KIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVV 714
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
Y I + G+ E+ L+ M + G P+ ++Y L+ K D + K+++ +
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
GC+PN T+R I H C +G D+A+ + E H V+G KK
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKK 831
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 164/411 (39%), Gaps = 67/411 (16%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEP 98
+KA I + + P +S Y + +T L ++K+ L + K +P +
Sbjct: 434 EKAFQILKEMMRKGFVPDTSTYTKVITF--LCQAKKVEKSFLLFQEMKRAGVNPDVYTYT 491
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD-- 156
L I S+ +AG+ + A FD+M +G +V+++ ALL A +S+ + +F
Sbjct: 492 IL---IDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548
Query: 157 -----------------------EIPKKY-------------------------NLSPDK 168
EI K ++P+
Sbjct: 549 VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNV 608
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++YG L+ C + A ELL+ M G E + Y +++ K G + A+ ++
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR 668
Query: 229 MEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M K G V Y I + G + +++ EM + P+ ++Y ++ K
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGE 728
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+++A + +EE GCSPN T+ I L +G D + K+FK+ P++ T ++
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRV 788
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAW--------KKVEEELGLV 390
L+ + EA ++ +K P L+ + KK LGL+
Sbjct: 789 LINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLL 839
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 17/278 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG--TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
L++ AG + R +M G RS I + A C R D + +L +
Sbjct: 210 LVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQAL-CKVGRWADALNML-----E 263
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + + D + ++ ++ ++A+ L+ M VTY T+L+ K+
Sbjct: 264 KEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFG 323
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+R+ + M +G + + + +N + + Y GD +L + M G P ++YN
Sbjct: 324 WCKRIINMMMTEGCNPNPSLFN-SLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIF 382
Query: 279 MTCYCKNE------MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ C E ++D +KVYE + C N + LCG G F+KA+++ KE
Sbjct: 383 IGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKE 442
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ +PD +T ++ L + KK++++ + + +K+
Sbjct: 443 MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKR 480
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 38/327 (11%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+++ SD L+++ + LI + + G D+A F +M + G S
Sbjct: 618 LCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V ++ +L+ + D + E+ + +P+ ++Y ++ G +KAL LL
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSEMLND-SCNPNVVTYTAMIDGLSKVGEIEKALNLL 736
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+ ME KG VTYT +++ L K G A+ + +L+ +M KG + Y V I +
Sbjct: 737 SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAA 796
Query: 252 D-----------------PERLKE-----------------LIDEMRDAGLKPDTISYNF 277
P+ L+ L++EM P Y
Sbjct: 797 GLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGM 856
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATT---FRTWIYHLCGSGNFDKAYKVFKESV 334
L+ + K ++ A ++++ L E S N T+ + + I LC + ++A+ ++ E
Sbjct: 857 LIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMT 916
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+PD LV+GL++ K EA
Sbjct: 917 RKGIVPDLIVFVSLVKGLIEVNKWDEA 943
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 91/223 (40%), Gaps = 33/223 (14%)
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L++ C G D+ALE L +++ G + VTY ++ L G E R+ EM
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233
Query: 233 GVDLDVA-----------------AYNVRITNTYGGDPERLKELIDEMRDAGL------- 268
G +D + A N+ + D ++I + +A L
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSF 293
Query: 269 ---------KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
P+ ++Y L++ + K + K++ + GC+PN + F + ++ C
Sbjct: 294 LHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCN 353
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+G++ AYK+F P + + + + ++++ A+
Sbjct: 354 AGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAE 396
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 47/240 (19%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDL-TVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
D A+ + S + +P Y + + ++ + ++ ++ +L+E P +
Sbjct: 695 DLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYT-- 752
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI-- 158
LI G+ G D +++ F QM+ G + +++ L+ C + L D+ +L DE+
Sbjct: 753 -ALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKH 811
Query: 159 -----------------PKKYNLS-------------PDKISYGLLLKSHCDSGSSDKAL 188
KK+ S P YG+L+ S +G + AL
Sbjct: 812 THWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETAL 871
Query: 189 ELLNEMENKGVEV-------TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
EL E+ VEV +T Y +++ L EEA L++EM +KG+ D+ +
Sbjct: 872 ELHKEL----VEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVF 927
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 104/265 (39%), Gaps = 38/265 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G D AM+ +M +V+++ A++ ++ +K L + +K
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEK 742
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y L+ +G +D +L+L +M +KG VTY ++N G +E
Sbjct: 743 -GCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDE 801
Query: 222 AERLWSEMEK-------KGVDLDVAAYN------------------VRITNTYG------ 250
A L EM+ +G V ++ V I YG
Sbjct: 802 AHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSF 861
Query: 251 ---GDPERLKELIDEMRDAGLKPDTIS---YNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G E EL E+ + + S Y L+ C ++EA +Y + G
Sbjct: 862 SKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIV 921
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKV 329
P+ F + + L +D+A ++
Sbjct: 922 PDLIVFVSLVKGLIEVNKWDEALQL 946
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 9/311 (2%)
Query: 59 VSSRYAQDLTVR-----RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMF 113
VS A DL + RL K + + + ++ +D L+ ++ +AG
Sbjct: 356 VSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNI 415
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A + QM+E +V++F+++L + K ++ K ++P+ ++YG
Sbjct: 416 DGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM-KDSGIAPNVVTYGT 474
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ + AL++ +M ++GVE +++N L K GN EEAE L+ +M ++G
Sbjct: 475 LIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534
Query: 234 VDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ LD Y + + G P LK + E+ + L PD + YN + C C+ EA
Sbjct: 535 LLLDHVNYATLMDGLFKTGNMPAALK-VGQELMERNLSPDAVVYNVFINCLCRLGKFSEA 593
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K + + G P+ T+ T I C GN KA K+ E P+ T LV G
Sbjct: 594 KSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVG 653
Query: 352 LVKKKKIKEAK 362
L++ +++AK
Sbjct: 654 LLEAGVVEKAK 664
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 152/371 (40%), Gaps = 42/371 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ ALD+Y + ++ + D V L K+ + E L + +
Sbjct: 486 EAALDVYRDMLHEGVE--ANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYA 543
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ + G A++ ++ E + +N + R + + E+ +
Sbjct: 544 TLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM-RN 602
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD+ +Y ++ + C G++ KAL+LLNEM+ ++ +TYTT++ L + G E+
Sbjct: 603 TGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEK 662
Query: 222 AERLWSEMEKKG-----------------------------------VDLDVAAYN--VR 244
A+ L +EM G + D+ YN V
Sbjct: 663 AKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVH 722
Query: 245 ITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ +G + ++DEM G+ PDTI++N L+ +CK+ +D A Y + G S
Sbjct: 723 VLCCHG-MTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLS 781
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK-KKIKEAKG 363
PN TF T + L +G +A V E + P+ T +LV G KK K++ +
Sbjct: 782 PNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRL 841
Query: 364 VIRTIKKKFPP 374
+ K F P
Sbjct: 842 YCEMVSKGFIP 852
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 39/300 (13%)
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
P ++ N+++ + C+ L + +L + ++ D +SY + L + G
Sbjct: 76 VPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRL 135
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL-----------------WS-- 227
A +L+EM +GV VT +T L L + G EA L W+
Sbjct: 136 APPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNAL 195
Query: 228 ------------------EMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGL 268
M +G+ LDV YN + Y GD + E+ + M+ G+
Sbjct: 196 IDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGV 255
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+P +++ L+ YCK + ++EA +YEG+ +G P+ T + LC G F +AY
Sbjct: 256 EPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYA 315
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELG 388
+F+E + P+ T ++ L K +++ E+ G++ + + L + V + LG
Sbjct: 316 LFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLG 375
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +AG+ + A ++M G + +++ +L AC+ SR V + E+
Sbjct: 650 LVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSR-SPYVILEVHELMMGA 708
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D Y L+ C G + KA +L+EM +G+ T+T+ ++ K + + A
Sbjct: 709 GLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNA 768
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++M +G+ ++A +N + G +I EM+ GL+P+ ++Y+ L+T
Sbjct: 769 FATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTG 828
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K EA ++Y + G P A+T+ + I +G ++A ++F E +
Sbjct: 829 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHT 888
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
+T +L+ G K + E + +++ +K+ F P+
Sbjct: 889 SSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPS 923
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 145/375 (38%), Gaps = 71/375 (18%)
Query: 74 KSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVI 133
K KR + TL E + L L+ + G F A F +MD++G + +
Sbjct: 271 KMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHV 330
Query: 134 SFNALLFACTR-SRLYDKVPILFDEIPKKY------------------------------ 162
++ + + + R+ + + +L + + +
Sbjct: 331 TYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHA 390
Query: 163 ---NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
N++P+ ++Y +L+ +HC +G+ D A ++L +ME K V VT++++LN L K+G
Sbjct: 391 LSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCI 450
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY------------------------------ 249
+A +M+ G+ +V Y I +
Sbjct: 451 AKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSL 510
Query: 250 ------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G+ E + L +M + GL D ++Y LM K M A KV + L E
Sbjct: 511 VNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNL 570
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
SP+A + +I LC G F +A KE PD T ++ ++ +A
Sbjct: 571 SPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALK 630
Query: 364 VIRTIK-KKFPPNVL 377
++ +K PN++
Sbjct: 631 LLNEMKWSSIKPNLI 645
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + A+ ++M G V+ +N L+ S D + + + K
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERM-KAD 253
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +++ L+ +C ++A L M GV VT + +++ L + G EA
Sbjct: 254 GVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEA 313
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
L+ EM+K GV + Y I + +R+ E L+ EM G+ D + Y +M
Sbjct: 314 YALFREMDKIGVAPNHVTYCTFIDSL--AKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K ++EAK V + +PN T+ + C +GN D A ++ +
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
P+ T ++ GLVK+ I +A G +R +K PNV+
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVV 470
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GM A D+M G I+FNAL+ +S D + ++ + LSP+ +
Sbjct: 728 GMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ-GLSPNIAT 786
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ LL +G +A ++ EM+ G+E +TY ++ K+ N EA RL+ EM
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 846
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG + YN I++ G + KEL EM+ G+ + +Y+ L+ + K
Sbjct: 847 SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGT 906
Query: 290 EAKKVYEGLEENGCSPNATTFRT 312
E + + + ++E G P+ T +
Sbjct: 907 EVRILLKDMKELGFKPSKGTISS 929
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + ++ D+A T+ QM G ++ +FN LL + + + E+ KK
Sbjct: 755 LILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEM-KKM 813
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++Y +L+ + + +AL L EM +KG TY ++++ K G +A
Sbjct: 814 GLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQA 873
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ L+SEM+++GV + Y++ + N + + ++ L+ +M++ G KP + + +
Sbjct: 874 KELFSEMKRRGVLHTSSTYDI-LLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSR 932
Query: 281 CYCKNEMMDEAKKVYEGL 298
+ K M EA+++ + L
Sbjct: 933 AFSKPGMTWEARRLLKTL 950
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 137/329 (41%), Gaps = 4/329 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL + + + SP + Y ++ + L + +FS+ ++ ++ +N + +
Sbjct: 558 ALKVGQELMERNLSPDAVVY--NVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTM 615
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I + + G A++ ++M ++I++ L+ + + +K L +E+
Sbjct: 616 ISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASA-G 674
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+P ++Y +L++ S S LE+ M G+ Y T+++ L G +A
Sbjct: 675 FTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKAT 734
Query: 224 RLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ EM +G+ D +N I + + +M GL P+ ++N L+
Sbjct: 735 IVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGL 794
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
+ EA V +++ G PN T+ + N +A +++ E V IP
Sbjct: 795 ESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKA 854
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+T L+ K + +AK + +K++
Sbjct: 855 STYNSLISDFAKAGMMNQAKELFSEMKRR 883
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L N + +AG + F+++ G V S++ L+ + LF E+
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM- 612
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ L D +Y +++ C SG +KA +LL EM+ KG++ T VTY +V++ L K
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
+EA L+ E + K VDL+V Y+ I G R+ E +++E+ GL P+T ++N
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGF--GKVGRIDEAYLILEELMQKGLTPNTYTWN 730
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ K E +DEA ++ ++ C PN T+ + LC F+KA+ ++E
Sbjct: 731 CLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQ 790
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
P+ T ++ GL + + EAK + K
Sbjct: 791 GLKPNTITYTTMISGLARVGNVLEAKDLFERFK 823
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I +G+ G D A + F ++ G ++F +++ ++ D+ LF+E+ +
Sbjct: 279 IDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKS 338
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P +Y ++ + G ++A LL + KG + + Y +L CL ++G EEA
Sbjct: 339 V-PCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL 397
Query: 224 RLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
R+ M+ ++ +YN+ I G+ E ++ D M++AGL P+ I+ N ++
Sbjct: 398 RILEAMKMDAAP-NLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRL 456
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +DEA ++ GL+ C+P++ TF + I L G + AY ++++ + + P+
Sbjct: 457 CKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPN 515
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E +K+ P +Y L+ + + +D L LL +M+ G EVT +TT++ ++
Sbjct: 191 ETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFARE 250
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTIS 274
G + A L EM+ + D+ YNV I + +G G + + E++ GL PD ++
Sbjct: 251 GRVDAALSLLDEMKSNSFNADLVLYNVCI-DCFGKVGKVDMAWKFFHELKSQGLVPDDVT 309
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ ++ CK E +DEA +++E L+ N P + T I G F++AY + +
Sbjct: 310 FTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQK 369
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNV 376
IP ++ L +K K++EA ++ +K PN+
Sbjct: 370 RKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNL 411
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 145/316 (45%), Gaps = 7/316 (2%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKND--PKITQEPYLCNLIRSYGQAGMFDHA 116
+ S A + + L + + + ++E+ K D P +T L +++ +AG + A
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDML---CKAGELEAA 430
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
++ D M E G ++I+ N ++ +++ D+ +F + K +PD +++ L+
Sbjct: 431 LKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV-CTPDSVTFCSLID 489
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
G + A L +M + G V YT+++ +K G E+ +++ EM +G
Sbjct: 490 GLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP 549
Query: 237 DVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
D+ N + + G+ E+ + L +E++ GL PD SY+ L+ K + K++
Sbjct: 550 DLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLF 609
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
++E G + + I C SG +KAY++ +E P T +++GL K
Sbjct: 610 YEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKI 669
Query: 356 KKIKEAKGVIRTIKKK 371
++ EA + K K
Sbjct: 670 DRLDEAYMLFEEAKSK 685
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 5/285 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K++R + L E ++ + +I YG G F+ A ++ G S
Sbjct: 317 LCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPS 376
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
VI++N +L R ++ + + + K + +P+ SY +L+ C +G + AL++
Sbjct: 377 VIAYNCILTCLGRKGKVEEALRILEAM--KMDAAPNLTSYNILIDMLCKAGELEAALKVQ 434
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+ M+ G+ +T +++ L K +EA ++ ++ K D + + + G
Sbjct: 435 DSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTF-CSLIDGLGR 493
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G L ++M D+G P+ + Y L+ + K ++ K+Y+ + GCSP+
Sbjct: 494 HGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLML 553
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + +G +K +F+E PD + +L+ GLVK
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 2/238 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LAK R + L E K+ +LI +G+ G D A +++ + G +
Sbjct: 666 LAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 725
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++N LL A ++ D+ + F + K P++++Y +++ C +KA
Sbjct: 726 TYTWNCLLDALVKAEEIDEALVCFQNM-KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFW 784
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
EM+ +G++ T+TYTT+++ L + GN EA+ L+ + G D A YN I
Sbjct: 785 QEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844
Query: 252 DPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+ L +E R G + + + L+ K + +++A V L E S +AT
Sbjct: 845 NKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQHAT 902
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 110/233 (47%), Gaps = 4/233 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + ++G + A + ++M G +V+++ +++ + D+ +LF+E K
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK- 685
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + + Y L+ G D+A +L E+ KG+ T T+ +L+ L K +EA
Sbjct: 686 AVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA 745
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI--DEMRDAGLKPDTISYNFLMT 280
+ M+ + Y++ + N + K + EM+ GLKP+TI+Y +++
Sbjct: 746 LVCFQNMKNLKCPPNEVTYSIMV-NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMIS 804
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+ + EAK ++E + +G P++ + I L + AY +F+E+
Sbjct: 805 GLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEET 857
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 6/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI + +AG D A M G ++++N L + C L D +L ++ ++
Sbjct: 226 LISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLL--KLMER 283
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELL-NEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD SY LLK C DKA L+ N+M KG+ V+Y T++ K G+
Sbjct: 284 SGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGL-CDVVSYNTIIKAFCKIGDTT 342
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L+ EM +KG+ DV + + I G G K+L+D+M + GL PD I Y ++
Sbjct: 343 SAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTII 402
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK+ ++ A ++ + E G SP+ +F I C +A +++E
Sbjct: 403 DHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSY 462
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
PD T KL++ GL+++KKI A
Sbjct: 463 PDEVTYKLIIGGLIEEKKISIA 484
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A++ + M G + A++ R D L ++ K + + Y
Sbjct: 165 FDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYN 224
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C +G DKA + + M G E VTY LN + ++A++L ME+
Sbjct: 225 ALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERS 284
Query: 233 GVDLDVAAYN----------------VRITN-----------TYG---------GDPERL 256
G++ DV +YN + +TN +Y GD
Sbjct: 285 GIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSA 344
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+L +EM G+ PD +++ + + + AKK+ + + E G SP+ + T I H
Sbjct: 345 YKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDH 404
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
LC SG + A+ +F + V PD + L+ G K ++ EA
Sbjct: 405 LCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEA 449
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 115/287 (40%), Gaps = 36/287 (12%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD-------------- 149
I Y +AG+ D A++ FD+M + I +N + +D
Sbjct: 16 IAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGF 75
Query: 150 -----------------KVPILFDEI---PKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
K DE+ + N PD ++ + L G D ALE
Sbjct: 76 SLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALE 135
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+ ++ G + VTYT +++ + K + A + W +M KG D A +
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLC 195
Query: 250 GGDPERL--KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G L + +ID M+ +K T+ YN L++ +C+ +D+A+ + + NGC P+
Sbjct: 196 DGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDL 255
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
T+ ++ + C D A K+ K PD + L++G+ K
Sbjct: 256 VTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 23/226 (10%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+S+N ++ A + LF+E+ +K + PD +++ + +K+ GS + A +LL
Sbjct: 325 VVSYNTIIKAFCKIGDTTSAYKLFEEMGQK-GIPPDVVTFTIFIKAFLGKGSFNIAKKLL 383
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
++M G+ + YTT+++ L K G E A ++ +M ++G+ DV ++N I
Sbjct: 384 DQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGF--C 441
Query: 252 DPERLKE---LIDEMRDAGLKPDTISYNFL-----------MTCYCKNEMMDEA----KK 293
R+ E L +EM++ G PD ++Y + + C +MMD+ +
Sbjct: 442 KCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRA 501
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + L NA+T R + N+ ++++ K+ V K+
Sbjct: 502 IAQTLIRGNSIENASTSRCLDFKF--HQNYSPSFRIIKDFVFSRKV 545
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L ++ Y + + +G DKA+++ +EM V ++ Y + L + A
Sbjct: 4 SLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLA 63
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+S+M +G L Y+ IT + + EL+ +M PD ++N +
Sbjct: 64 NHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHL 123
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--I 339
+D A +V+E + +NG P+ T+ I+ +C FD A + +++ M+HK
Sbjct: 124 LFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRD--MIHKGFS 181
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD +V GL +K+ A +I + K
Sbjct: 182 PDNKACGAIVVGLCDGRKVDLAYELIIDVMK 212
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
I+++ G F+ A + DQM E+G I + ++ +S + +F ++ ++
Sbjct: 366 FIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQ- 424
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD IS+ L+ C +A+ L EM+N+G VTY ++ L ++ A
Sbjct: 425 GISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIA 484
Query: 223 ERLWSEMEKKGVDLDVA 239
+W +M KG LD A
Sbjct: 485 CMVWGQMMDKGFTLDRA 501
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 162/361 (44%), Gaps = 44/361 (12%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
IYS++ K P + + ++ ++ L K+ R L+ + E LI S
Sbjct: 168 IYSNMKKDGMEP--NVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISS 225
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+ G A ++ TP SV +NAL+ + +++ L DE+ K + P
Sbjct: 226 LCKLGKVKEA----RELAMSFTP-SVPVYNALINGVCKEYTFEEAFQLLDEMMNK-GIDP 279
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ISY ++ + D+G+ + +L +L +M +G T+T+++ + +G + EA W
Sbjct: 280 NVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFW 339
Query: 227 SEMEKKGVDLDVAAYN---------------VRITN------------TY---------G 250
M ++GV +V AYN V + N TY
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
GD + E+ + M G P+ ++Y ++ C+N M ++A + E ++ C PN TF
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T+I LCGSG D A KVF + P+ T L++ L+K ++ EA G+++ ++
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519
Query: 371 K 371
+
Sbjct: 520 R 520
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 182/417 (43%), Gaps = 81/417 (19%)
Query: 34 KLRSEFDPDKALDIYSSVS-----KHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
+L+ E D AL+ + S++ KH +P++ + + + +LA + ++ L++
Sbjct: 49 RLKHEHDITLALEYFKSIANSKSFKH--TPLTYQ----MMIEKLASEREMDCVQYLLQQM 102
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
K + E ++I SY +AG + A++TF +M + +V +N +L A +
Sbjct: 103 KLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRF 162
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
+ ++ + KK + P+ +Y +LLK+ C + D A +LL EM +KG + V+YTT
Sbjct: 163 QMINPIYSNM-KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 209 VLNCLYKQG-------------------NA-----------EEAERLWSEMEKKGVDLDV 238
+++ L K G NA EEA +L EM KG+D +V
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNV 281
Query: 239 AAY-----------NVRIT----------------NTY----------GGDPERLKELID 261
+Y NV ++ +T+ GG E L + D
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL-DFWD 340
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M G+ P+ ++YN LM C + +A V+ +E NGC PN T+ I +G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+ D A +V+ + P+ +V+ L + +A +I ++ + PPN +
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTV 457
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 120/254 (47%), Gaps = 8/254 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +AG D A ++ M G +V+++ ++ R+ ++++ L + + +
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVE- 450
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N P+ +++ +K C SG D A+++ ++M N G T TY +L+ L K EA
Sbjct: 451 NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA 510
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYNFL 278
L +ME +G++L++ YN I YG G EL+ +M G KPD I+ N +
Sbjct: 511 FGLVKDMEHRGIELNLVTYNTII---YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YCK ++ A ++ + L P+ + + I +C ++A + +
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627
Query: 339 IPDFNTVKLLVEGL 352
P+ T +LV L
Sbjct: 628 SPNVATWNVLVRHL 641
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 5/279 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI+ + G A+ +D+M G +V+++NAL+ C++ L D V + F+++
Sbjct: 321 SLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSV-FNQMEI 379
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P+ +Y L+ + +G D A E+ N M G V YT +++ L +
Sbjct: 380 N-GCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFN 438
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A L M+ + + +N I G G + ++ D+M ++G P+T +YN L+
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELL 498
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K+ EA + + +E G N T+ T IY C +G +A ++ + V+
Sbjct: 499 DSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTK 558
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
PD TV ++++ K+ K+ A ++ R K+ P+++
Sbjct: 559 PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D A ++++ + H P + A V L ++ F+ LIE+ + +
Sbjct: 401 DLDGASEVWNWMITHGCHP--NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
I+ +G D A++ FDQM G + ++N LL + + R + + L ++
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-- 217
+ + + ++Y ++ +C +G +ALELL +M +G + +T V++ KQG
Sbjct: 519 HR-GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKV 577
Query: 218 ---------------------------------NAEEAERLWSEMEKKGVDLDVAAYNVR 244
EEA M +G+ +VA +NV
Sbjct: 578 NIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVL 637
Query: 245 ITNTY 249
+ + +
Sbjct: 638 VRHLF 642
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 43/329 (13%)
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTR 144
E H DP + + N + GQ + A +QM + G + +FN L+ A CT
Sbjct: 315 EGH--DPDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 145 SRLYDKVPI----------------------------------LFDEIPKKYNLSPDKIS 170
+RL + + + LF+E+ K +PD+++
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVT 428
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ + C G KAL+LL +ME+ G +T+TY T+++ L K+ EEAE ++ +M+
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+G+ + +N I + ELI++M GL+P+ I+YN ++T YCK +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+A + E + NG + T+ T I LC +G A KV + + P ++
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 350 EGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+ L ++ I++A + R + + PP+ L
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDAL 637
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 5/314 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALD+ V+ SP Y ++ + L K L E KN E
Sbjct: 373 EEALDLARQVTVKGVSP--DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G A+ M+ G PRS I++N ++ + ++ +FD++ +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + I++ L+ C D A EL+N+M ++G++ +TY ++L KQG+ ++
Sbjct: 491 -GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M G ++DV Y I G + +++ MR G++P +YN ++
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKI 339
+ + +A ++ + E G P+A T++ LC G G +A+ E V I
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669
Query: 340 PDFNTVKLLVEGLV 353
P+F++ ++L EGL+
Sbjct: 670 PEFSSFRMLAEGLL 683
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 158/362 (43%), Gaps = 44/362 (12%)
Query: 33 SKLRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND 91
+ LR + DPD AL + +++++ +P Y + +R+L ++ L+ + +
Sbjct: 46 TALREQPDPDAALRMLNAALARDDFAPGPEVYEE--IIRKLGAVGALDLMKVLVAEMRRE 103
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMR-TFDQMDEL-GTPRSVISFNALLFACTRSRLYD 149
+ + + + SY +FD A+ +Q+ L G + +N LL
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ ++ E+ + + PD +++ L+K+ C + A+ +L EM ++GV T+TT+
Sbjct: 164 LLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTL 222
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-------------------G 250
+ ++G+ E A R+ + M + G NV I N Y G
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI-NGYCKLGRVEDALGYIQQEIADG 281
Query: 251 GDPERLK------------------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+P+++ +++D M G PD +YN ++ C CKN ++EAK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + + GC P+ TTF T I LC ++A + ++ + PD T +L+ L
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401
Query: 353 VK 354
K
Sbjct: 402 CK 403
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 116 AMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ FD+M + G P +I L C +++D LF ++ + + D I+Y +L
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQR-LFSKM-RASGCNRDLITYNVL 274
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L C SG D A LL + G + + Y ++N L++ EEA + +M ++ +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENI 334
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV Y + I + G L+ EM + GL+PDTI YN L+ +C +DEA+
Sbjct: 335 KPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAES 394
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + ++ C PN T+ I +C +G +KA +FKE + +P T L+ GL
Sbjct: 395 LRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Query: 354 KKKKIKEAK 362
K +++EA+
Sbjct: 455 KANRLEEAR 463
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 20/293 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+IR Q G A+ +M E G I +NAL+ D+ L EI K+
Sbjct: 344 MIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEI-SKH 402
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y +L+ C +G +KA + EME G + VT+ +++N L K EEA
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462
Query: 223 ERLWSEME-----------KKGVD--LDVAAYNVRITNTY-GGDPERLKELIDEMRDAGL 268
L+ +ME +G D D+A+ V + G + +L+ ++ D+G+
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGV 522
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PD +YN L+ +CK ++ A K+++ ++ G P++ T+ T I L +G + A +
Sbjct: 523 LPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALE 582
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
+F++ V +P+ +T K ++ ++ I A V + F R W+
Sbjct: 583 IFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDF-----RGWE 630
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 162/336 (48%), Gaps = 17/336 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES--HKNDP--KITQE 97
D A D +++ + +P + Y L R L ++ R+ + L+ KN P ++T
Sbjct: 344 DDAYDFLNNMGMYGCNPDTISYTTVL--RGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 401
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
++C L Q G+ + A++ + M E G ++++NAL+ C + R+ D LF+
Sbjct: 402 TFICILC----QKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV-DSALELFN 456
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+P + P+ I+Y LL C + D A ELL EM K + VT+ +++ ++
Sbjct: 457 NLPCE----PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQK 512
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
G EEA L ++M + G ++ +N + T + E EL+ + G+ DTI+Y
Sbjct: 513 GFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITY 572
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ ++ + + +EA ++ +++ G P + ++ LC D+A F V
Sbjct: 573 SSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 632
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+P+ +T +L+EGL + +KEA+ V+ + K
Sbjct: 633 NGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 668
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 152/332 (45%), Gaps = 9/332 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +I + +S + P Y L + L ++R+ D++ L + + E
Sbjct: 239 DDAKEILNRLSSYGFQPDIVSYTTVL--KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
L+R + + GM + A++ QM + G TP + + + C + R+ D L +
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM--G 354
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y +PD ISY +L+ C +G + A ELL EM K VT+ T + L ++G E
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-RLKELIDEMRDAGLKPDTISYNFLM 279
+A +L M + G + + YN + +G + R+ ++ + +P+TI+Y L+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALV---HGFCVQGRVDSALELFNNLPCEPNTITYTTLL 471
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T C E +D A ++ + + C NA TF + C G ++A ++ + +
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCT 531
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T L++G+ K +EA ++ + K
Sbjct: 532 PNLITFNTLLDGITKDCNSEEALELLHGLVSK 563
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 106/212 (50%), Gaps = 2/212 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P ++Y +LL++ C S +A+ +L+EM KG VTY ++N + ++G ++A+ +
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ + G D+ +Y + + +K L EM D P+ ++++ L+ +C+
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
M++ A +V + + ++GC+PN T I +C G D AY M PD +
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364
Query: 345 VKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
++ GL + + + AK ++ ++K PPN
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPN 396
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 121/244 (49%), Gaps = 2/244 (0%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M + G SV+++ LL A +S + + + DE+ K +P+ ++Y +++ C G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK-GCTPNIVTYNVIINGMCREG 236
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAY 241
D A E+LN + + G + V+YTTVL L ++ + L++EM +KK V +V
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296
Query: 242 NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ GG ER +++ +M G P+T N ++ CK +D+A +
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC+P+ ++ T + LC +G ++ A ++ E V + P+ T + L +K I++A
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416
Query: 362 KGVI 365
+I
Sbjct: 417 IKLI 420
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M G +P ++Y L+ CK+ EA V + + GC+PN T+ I +C G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
D A ++ PD + +++GL ++ + K + + KK PN
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPN 291
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
P LC LI +AG D + + G I+F LL C R D + I
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVL 210
+ + + P+ SY LL CD S +ALELL+ M + G V+YTTV+
Sbjct: 145 VLRRM-TELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-----ERLKE------- 258
N +K+G++++A + EM +G+ DV Y+ I G KE
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESE 263
Query: 259 -LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L D M G+KPD I+Y+ L+ YC MDEA K+ G+ G PN T+ T I
Sbjct: 264 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY 323
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C + A +FKE PD T ++++GL + ++ AK
Sbjct: 324 CKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 368
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 136/271 (50%), Gaps = 14/271 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK------------ 150
+I + + G D A T+ +M + G V+++++++ A + + DK
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIE 261
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
LFD + + + PD I+Y L+ +C +G D+A++LL+ M + G++ TVTY+T++
Sbjct: 262 SEKLFD-LMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLK 269
N K E+A L+ EME GV D+ YN+ + + KEL + ++G +
Sbjct: 321 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 380
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
+ +YN ++ CKN++ D+A ++++ L A TF I L G D+A +
Sbjct: 381 IELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDL 440
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
F +P++ T +L+ E ++ + ++E
Sbjct: 441 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 471
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 107/230 (46%), Gaps = 10/230 (4%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNL 164
S+ + G + + FD M +G +I+++ L+ C ++ + + +L + L
Sbjct: 252 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMV--SVGL 309
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
P+ ++Y L+ +C + AL L EME+ GV +TY +L L++ A+
Sbjct: 310 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 369
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK----ELIDEMRDAGLKPDTISYNFLMT 280
L+ + + G ++++ YN+ + +G +L ++ + LK + ++N ++
Sbjct: 370 LYVRITESGTQIELSTYNIIL---HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 426
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
K DEAK ++ NG PN T+R ++ G G ++ ++F
Sbjct: 427 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 476
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 52/250 (20%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT---------------- 207
++PD +YG+L+ C +G D L + KG V +T+T
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 208 --------------------TVLNCLYKQGNAEEAERLWSEM---EKKGVDLDVAAYNVR 244
+LN L + ++EA L M G DV +Y
Sbjct: 143 DIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 245 ITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD------------EA 291
I + GD ++ EM D G+ PD ++Y+ ++ CK + MD E+
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIES 262
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+K+++ + G P+ T+ T I C +G D+A K+ V V P+ T L+ G
Sbjct: 263 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLING 322
Query: 352 LVKKKKIKEA 361
K ++++A
Sbjct: 323 YCKISRMEDA 332
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y AG D AM+ M +G + ++++ L+ C SR+ D + +LF E+ +
Sbjct: 284 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL-VLFKEM-ES 341
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD I+Y ++L+ + + A EL + G ++ TY +L+ L K ++
Sbjct: 342 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 401
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +++ + + L+ +N+ I G + K+L GL P+ +Y +
Sbjct: 402 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 461
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+++E +++ +E+NGC+ ++ + L
Sbjct: 462 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 498
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + AM DQ+ LG +V+ +N ++ + +R D + + + +K
Sbjct: 148 SLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHM-EK 206
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD I+Y L+ SG + +L++M G+ +T++ +++ K+G E
Sbjct: 207 MGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLE 266
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++ + EM ++ VD ++ YN I G + K++++ M G P+ ++YN L+
Sbjct: 267 AKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVN 326
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK++ +D+A K+ + +G + T+ T C +G F+ A KV V +P
Sbjct: 327 GYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLP 386
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
D T +L++GL + KI++A
Sbjct: 387 DIYTFNMLLDGLCEHGKIEKA 407
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 133/299 (44%), Gaps = 4/299 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R S +F+D TL + L+ + + ++ + F ++ LG
Sbjct: 45 LRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGI 104
Query: 129 PRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ SF+ L+ C SRL + L + K P +++G L+ C +A
Sbjct: 105 SHDLYSFSTLIDCFCRCSRLSLALSCLGKMM--KLGFEPSIVTFGSLVNGFCHVNRIQEA 162
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L++++ G E V Y T+++ L + + A + + MEK G+ DV YN IT
Sbjct: 163 MSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITR 222
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G ++ +M G+ PD I+++ ++ + K + EAKK Y+ + + PN
Sbjct: 223 LFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPN 282
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
T+ + I LC G D+A KV V P+ T LV G K K++ +A ++
Sbjct: 283 IVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL 341
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +G + + R M +G VI+F+A++ + + +DE+ ++
Sbjct: 218 SLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQR 277
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ P+ ++Y L+ C G D+A ++LN M +KG VTY T++N K ++
Sbjct: 278 -SVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDD 336
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ M GVD D YN G ++++ M G+ PD ++N L+
Sbjct: 337 AMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLD 396
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C++ +++A E L+++ T+ I +C + + A+ +F + P
Sbjct: 397 GLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSP 456
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D T ++ GL +K+ EA + R +KK
Sbjct: 457 DVITYTTMMIGLRRKRLWLEAHELYRKMKK 486
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 104/240 (43%), Gaps = 38/240 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +G+ G A + +D+M + +++++N+L+ L D+ + + + K
Sbjct: 254 MIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK- 312
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++Y L+ +C S D A+++L M + GV+ T TY T+ + G A
Sbjct: 313 GFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAA 372
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT--YGGDPERLKELID------------------- 261
E++ + M GV D+ +N+ + +G + L +L D
Sbjct: 373 EKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKG 432
Query: 262 -----EMRDA----------GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL-EENGCSP 305
++ DA G+ PD I+Y +M + + EA ++Y + +++G P
Sbjct: 433 MCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 159/355 (44%), Gaps = 9/355 (2%)
Query: 18 GSSTT---ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV-SSRYAQDLTVRRLA 73
GS T + I ++ +++E D KA+ I+ S + Y + S L + RL
Sbjct: 2 GSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLV 61
Query: 74 KSKRFSDIETLIESHKNDP-KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
+ F E L+ K + IT++ +L ++ R+YG+ A+R F +M E S
Sbjct: 62 SANHFRLAEELLCRMKEEKCNITEDIFL-SICRAYGRVHKPLDAVRVFRKMKEYECEPSQ 120
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC-DSGSSDKALELL 191
S+ +FA K+ + F ++ + P S +L+K+ C +SG+ D AL +
Sbjct: 121 KSY-ITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIF 179
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
EM N+G + TY T++N L + G EA+ L+ EME K V Y I
Sbjct: 180 REMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQS 239
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
D + L++EM G+KP+ +Y+ LM +CK+ A ++ + + PN T+
Sbjct: 240 KDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITY 299
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
T ++ LC G +A ++ + PD ++ G K EA +
Sbjct: 300 STLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFL 354
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 20/310 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A F +M+ +V+++ +L+ +S+ D L +E+ K
Sbjct: 197 LINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASK- 255
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y L+ HC SG S +ALELL+ M ++ +TY+T+++ L K+G +EA
Sbjct: 256 GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISY---- 275
+ M+ +G+ D Y I+ D + E +DEM G+ P+ +++
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGF--CDICKFHEAANFLDEMVLGGISPNRLTWSLHV 373
Query: 276 ---NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
N ++ C E + A ++Y + G S +A TF + + + C G+ KA + E
Sbjct: 374 RIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDE 432
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-----IKKKFPPNVL-RAWKKVEEE 386
V+ IPD T +V ++K++E+ +++ +K P N WK E +
Sbjct: 433 MVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVEHRKMGPDNTNDLIWKVQETD 492
Query: 387 LGLVPAPAVG 396
L P VG
Sbjct: 493 SSLYFPPRVG 502
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 5/237 (2%)
Query: 146 RLYDKVPILFDEIPKKY--NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R K ++FD +Y ++ L++ + A ELL M+ + +T
Sbjct: 26 RDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITE 85
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDE 262
+ ++ + +A R++ +M++ + +Y G + +L
Sbjct: 86 DIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRY 145
Query: 263 MRDAGLKPDTISYNFLMTCYCKNE-MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
MR+ G+ P S N L+ CKN MD A +++ + GC P++ T+ T I LC G
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLG 205
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+A ++FKE P T L+ GL + K + A ++ + K PNV
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVF 262
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 42/374 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYL 100
+ LD+ S + + +P Y ++ + L+K F + LI E K K++ Y
Sbjct: 251 QQGLDLLSEMQRRGCAPNDVTY--NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTY- 307
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD---------- 149
LI Y GM A+ ++M G +V ++N+ ++ C R+ D
Sbjct: 308 NPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLA 367
Query: 150 ------------------------KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
K +LFDE+ Y L P ++Y LL C G +
Sbjct: 368 NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY-LFPTIVTYNTLLDGLCRQGELE 426
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A +L EM N+G+ VTYT ++N K G+ A+ + EM +G++LD AY RI
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 246 TNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
GD R L +EM G PD I YN ++ CK ++EA ++ + + +G
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ + I+ +G K ++F E + P T +L+ G K +++ A
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606
Query: 365 IRTIKKK-FPPNVL 377
+++K PNV+
Sbjct: 607 FSEMQEKGILPNVI 620
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + M + + FD+M + V + N +L L K ++ + ++
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM-GEF 228
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++Y LL S+C G + L+LL+EM+ +G VTY ++N L K+G E+A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L EM K G+ + YN I + G L +EM G P +YN +
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M +A + + N P+ ++ T IY C GN KA+ +F E ++ P
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
T L++GL ++ +++ A+ + + I + P+++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD I Y +++ C G+ ++A ELL +M + GV VTYT++++ + G + +
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ EM KG+ V Y V I G G ER EM++ G+ P+ I+YN L+ CK
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
MD+A + + E G PN ++ I C GN+ +A ++K+ + PD T
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691
Query: 345 VKLLVEGLVKKKKIKEAKG 363
L++ L K K++ G
Sbjct: 692 HSALLKQLGKDCKLQAVHG 710
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 150/366 (40%), Gaps = 49/366 (13%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRL-AKSKRFSDIETL-----------------I 85
+ + S S H A P S + QD+ + + K FS+ L +
Sbjct: 29 SFSFHDSTSNHSAPPFSETHFQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVL 88
Query: 86 ESHKNDPKIT---------------QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
S + P++ E C ++ Q + A +++ R
Sbjct: 89 SSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR 148
Query: 131 --------------SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
SV + L++ ++ + ++ +FD++ K LSPD + +L+
Sbjct: 149 IVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKS-RLSPDVKNCNRILR 207
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
D KA+E+ M G++ T VTY T+L+ K G ++ L SEM+++G
Sbjct: 208 ILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAP 267
Query: 237 DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ YNV I + G+ E+ K LI EM GLK +YN L+ Y M+ EA +
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQ 327
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
E + G SP T+ ++IY LC G A + + + + +PD + L+ G +
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 356 KKIKEA 361
+ +A
Sbjct: 388 GNLMKA 393
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G + A +M G +++ +++ A RL I ++ + K L+P +
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK--GLTPSVV 585
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+Y +L+ H G ++A +EM+ KG+ +TY +++N L K ++A ++EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 230 EKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+KG+ + +Y + I N G+ + L +M D G++PD+ +++ L+
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ V L K + L++ +D I ++I ++ + G F +M
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G SV+++ L+ ++ I F E+ +K + P+ I+Y L+ C D
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK-GILPNVITYNSLINGLCKVRRMD 636
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+A EM KG+ +YT ++N GN +EA L+ +M +GV D
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 137/274 (50%), Gaps = 8/274 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR A D A+ +M E G +V+ +++LL +S ++ V +F E+ +K
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK- 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD + Y L+ S C G + KA +++ M +G+E VTY ++NC+ K+G+ +EA
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAG--LKPDTISYNF 277
+ +M +KGV DV YN I D + E L++EM +KP+ +++N
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGL--SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C M +A +V +EE GC N T+ I L KA ++ E +
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +L++G K ++ A+ ++ T++ +
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 6/268 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I+ G A + M+E G +++++N L+ R K L DE+
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM-TS 390
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+K C D+A +LL+ M ++G+E Y +L + +QG E
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L++EM+ LDV AY+ I GD + KEL+ + D GL PD ++Y+ ++
Sbjct: 451 ARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ K+ M+ A V + + +G P+ F + I G +K ++ +E + +
Sbjct: 510 MFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIAL 569
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D + L LV E K +++++
Sbjct: 570 DSKIISTLSTSLVAS---NEGKALLQSL 594
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 40/279 (14%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS--PDKISY--------- 171
+D L + R +S+N +L A R +D+ L + + + + P+ +SY
Sbjct: 68 LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127
Query: 172 --------------------------GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
G L++ CD+ DKA+EL+ EM G+E V
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMR 264
Y+++L K G E+ +++ EM +KG++ DV Y I + G ++ ++D M
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
GL+P+ ++YN L+ C CK + EA V + + E G +P+ T+ T I L D
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307
Query: 325 KAYKVFKESVMVHKI--PDFNTVKLLVEGLVKKKKIKEA 361
+A + +E V I P+ T +++GL ++++A
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA 346
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 156/335 (46%), Gaps = 17/335 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLIESHKN--DPKITQEP 98
DKA+++ + + P Y+ L + KS R+ D+ + +E + +P +
Sbjct: 167 DKAVELMGEMCESGIEPNVVVYSSLL--QGYCKSGRWEDVGKVFVEMSEKGIEPDVVM-- 222
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDE 157
LI S + G A D M G +V+++N L+ C + + + +L +
Sbjct: 223 -YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL-KK 280
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG--VEVTTVTYTTVLNCLYK 215
+ +K ++PD ++Y L+K D D+A+ LL EM V+ VT+ +V+ L
Sbjct: 281 MSEK-GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD 339
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTIS 274
G +A ++ + ME+ G +++ YN+ I R EL+DEM GL+PD+ +
Sbjct: 340 IGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFT 399
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y+ L+ +CK +D A+ + + + G P + + +C G ++A +F E
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-- 457
Query: 335 MVHKIP-DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
M + P D ++ G K +K AK ++++I
Sbjct: 458 MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME---NKGVEVTTVTYTTVL 210
L D +P D +SY +L + C G D+A LL M + V+YT ++
Sbjct: 67 LLDALPSVR----DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLK 269
L A++A L M GV DV Y I + ++ EL+ EM ++G++
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ + Y+ L+ YCK+ ++ KV+ + E G P+ + I LC G KA+ V
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
V P+ T +L+ + K+ +KEA GV++ + +K P+V+
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 140/337 (41%), Gaps = 39/337 (11%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
++ K+K+ + ++ +P + L N + + G A+ +M E G
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM---CKEGSVKEAIGVLKKMSEKGVAP 288
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNL-SPDKISYGLLLKSHCDSGSSDKALE 189
V+++N L+ + D+ L +E+ + N+ P+ +++ +++ CD G +A +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
+ ME G V VTY ++ L + +A L EM G++ D Y++ I
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN------- 301
+R ++L+ MRD G++P+ Y L+ C+ MM+ A+ ++ ++ N
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVA 468
Query: 302 ---------------------------GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
G +P+A T+ I SG+ + A V K+
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+PD L++G K +I + +IR + K
Sbjct: 529 ASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 126/248 (50%), Gaps = 3/248 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R Y +AG+ A+ F++M++ G +I+F+ ++ + R + FD + K+
Sbjct: 189 LVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNL--KH 246
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I Y L+ C +G +A + EM+ G+ TY+ V++ L + G A
Sbjct: 247 KFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRA 306
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++EM G + + +N I + G E++ ++ ++M+ D I+YNFL+
Sbjct: 307 HDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIET 366
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK++ + EA KV + +N C+PNA++F + S + + A+++F V P+
Sbjct: 367 HCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPN 426
Query: 342 FNTVKLLV 349
T +L+
Sbjct: 427 TVTYNILM 434
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 147/306 (48%), Gaps = 9/306 (2%)
Query: 72 LAKSKRFSDIETLIES--HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
L K +R + ++ ++ HK +P + +L+ + +AG A F +M G
Sbjct: 228 LCKKRRAVEAQSFFDNLKHKFEPDVI---VYTSLVHGWCRAGDISEAESVFREMKMAGIS 284
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+V +++ ++ A RS + +F E+ +P+ +++ L++ H +G ++K L+
Sbjct: 285 PNVYTYSIVIDALCRSGQITRAHDVFAEMLDA-GCNPNSVTFNNLIRVHLRAGRTEKVLQ 343
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNT 248
+ N+M+ +TY ++ K N EA ++ + M K + +++N +
Sbjct: 344 VYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIA 403
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
D + M++ G KP+T++YN LM + + D K+ + ++E PN
Sbjct: 404 KSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFN 463
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVI-R 366
T+R I CG G+++ AY F+E + I P K+++E L K ++K+ + ++ +
Sbjct: 464 TYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDK 523
Query: 367 TIKKKF 372
+++ F
Sbjct: 524 MVERGF 529
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
++ K N+ +++ +L++ + +G + +A+ N ME+ G + ++ V++ L K+
Sbjct: 172 DLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKK 231
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
A EA+ + ++ K + DV Y + GD + + EM+ AG+ P+ +Y
Sbjct: 232 RRAVEAQSFFDNLKHK-FEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTY 290
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ ++ C++ + A V+ + + GC+PN+ TF I +G +K +V+ +
Sbjct: 291 SIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKR 350
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ D T L+E K + EA V+ ++ K
Sbjct: 351 LRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAK 385
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 149/290 (51%), Gaps = 7/290 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDEL 126
+R A+ R +L++ K++ + + L N+ I +G+AG D A + F ++
Sbjct: 239 VIRVFAREGRLDAALSLLDEMKSNC-LHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSH 297
Query: 127 GTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G +++ +++ C +RL + V I F+++ + N+ P +Y ++ + +G D
Sbjct: 298 GLLPDDVTYTSMIGVLCKGNRLDEAVEI-FEQMEQNRNV-PCAYAYNTMIMGYGSAGKFD 355
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A LL + +G + + Y +L CL K+G EA R + EM+K +++ YNV I
Sbjct: 356 EAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP-NLSTYNVLI 414
Query: 246 TN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G+ E ++ D M++AGL P+ ++ N ++ CK + +DEA ++EG+ CS
Sbjct: 415 DMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICS 474
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
P+ TF + I L G D AY+++++ + KIP+ L++ K
Sbjct: 475 PDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFK 524
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-D 124
++ + RL K+K+ + ++ E + E C+LI G+ G D A R ++QM D
Sbjct: 446 NIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505
Query: 125 ELGTPRSVI--SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
P +V+ S F C R K+ F E+ + SPD + +G
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKI---FKEMIHR-GCSPDLRLLNAYMDCVFKAG 561
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ K L E++++G ++Y+ +++ L K G A E L+ M+++G LD AYN
Sbjct: 562 ETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I G + +L++EM+ G +P ++Y ++ K + +DEA ++E + N
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G N + + I G D+AY + +E + P+ T L++ LVK ++I EA
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741
Query: 362 KGVIRTIKK-KFPPN 375
+ +K K PN
Sbjct: 742 LVCFQNMKNLKGTPN 756
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 43/366 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A I+ ++ SP + + L K R D L E + KI
Sbjct: 459 DEACSIFEGMNHKICSPDEVTFCS--LIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYT 516
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI+S+ + G + + F +M G + NA + ++ K LF+EI K
Sbjct: 517 SLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEI-KS 575
Query: 162 YNLSPDKISY--------------------------GLLLKSH---------CDSGSSDK 186
PD +SY G +L +H C SG +K
Sbjct: 576 RGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNK 635
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A +LL EM+ KG + T VTY +V++ L K +EA L+ E + G++L+V Y+ I
Sbjct: 636 AYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G R+ E +++E+ GL P+ ++N L+ K E ++EA ++ ++
Sbjct: 696 GF--GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG 753
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+PN T+ I LC F+KA+ ++E P+ T ++ GL K I EA
Sbjct: 754 TPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASS 813
Query: 364 VIRTIK 369
+ K
Sbjct: 814 LFERFK 819
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 22/340 (6%)
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE-----SHKNDPKITQEPYL 100
D+ +++S SP + DL + L ++K D+ I K D + E Y
Sbjct: 81 DVENALSLFVESPKT-----DLVIGVLRRAK---DVNQAISYFRWTERKTDQALCPEAYD 132
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP- 159
+L+ + FD+ + +M G S + L+ +C +S +K+ FD I
Sbjct: 133 -SLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKS---NKLREGFDLIQC 188
Query: 160 -KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+K+ P +Y L+ + SD L L ++M+ G EV+ +TTV+ ++G
Sbjct: 189 MRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGR 248
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYN 276
+ A L EM+ + D+ YNV I + +G G + + E++ GL PD ++Y
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCI-DCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYT 307
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK +DEA +++E +E+N P A + T I +G FD+AY + +
Sbjct: 308 SMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKAR 367
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNV 376
IP ++ L KK ++ EA +KK PN+
Sbjct: 368 GCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNL 407
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 5/260 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D + F QM ELG SV F ++ R D L DE+ K L D + Y +
Sbjct: 215 DIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEM-KSNCLHADIVLYNV 273
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
+ +G D A + +E+++ G+ VTYT+++ L K +EA ++ +ME+
Sbjct: 274 CIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNR 333
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
AYN I YG G + L++ + G P I+YN ++TC K + EA
Sbjct: 334 NVPCAYAYNTMIMG-YGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEA 392
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ +E ++++ +PN +T+ I LC +G + A+KV P+ TV ++++
Sbjct: 393 LRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDR 451
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
L K KK+ EA + + K
Sbjct: 452 LCKAKKLDEACSIFEGMNHK 471
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 4/316 (1%)
Query: 48 YSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
YS + + A + S A + + L K R + E K D Y LI
Sbjct: 358 YSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNV-LIDM 416
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+AG + A + D M E G +V++ N ++ +++ D+ +F+ + K SP
Sbjct: 417 LCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI-CSP 475
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D++++ L+ G D A L +M + V YT+++ +K G E+ +++
Sbjct: 476 DEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF 535
Query: 227 SEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
EM +G D+ N + + G+ + + L +E++ G PD +SY+ L+ K
Sbjct: 536 KEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKA 595
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
E +++ ++E GC + + T+I C SG +KAY++ +E + P T
Sbjct: 596 GFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTY 655
Query: 346 KLLVEGLVKKKKIKEA 361
+++GL K ++ EA
Sbjct: 656 GSVIDGLAKIDRLDEA 671
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LAK R + L E K++ +LI +G+ G D A +++ + G +
Sbjct: 662 LAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 721
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V ++N LL A ++ ++ + F + K +P+ I+Y +L+ C +KA
Sbjct: 722 VYTWNCLLDALVKAEEINEALVCFQNM-KNLKGTPNHITYSILINGLCRVRKFNKAFVFW 780
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
EM+ +G++ T+TYTT++ L K GN EA L+ + G D A+YN I +Y
Sbjct: 781 QEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYS 840
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
++ +E R G T + L+ K+E +++A V L E S +A
Sbjct: 841 RRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHAA-- 898
Query: 311 RTW 313
R+W
Sbjct: 899 RSW 901
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 5/263 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMD---ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+++ + ++G D AM F QM + P V ++N L+ +++ + +LF+ +
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCV-TYNTLVNGFCKAKRLAEARVLFEAMK 176
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + P+ ++Y +L+ +C SG + L LL EME +G++ Y+++++ +G+
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E L+ EM ++ V +V Y+ + G E++ +M G++PD ++Y L
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
CKN +A KV + + + G P T+ + LC D A+ V + V K
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
PD T L++GL KI EA
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEA 379
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 139/329 (42%), Gaps = 50/329 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+ ++S + ++Y V + V K+KR ++ L E+ K P L
Sbjct: 129 DKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDC--RPNLV 186
Query: 102 N---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LI Y ++G + ++M+ G
Sbjct: 187 TYSVLIDCYCKSGEVGEGLGLLEEMEREG------------------------------- 215
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
L D Y L+ + C G + EL +EM + V VTY+ ++ L + G
Sbjct: 216 -----LKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNV----RITNTYGGDPERLKELIDEMRDAGLKPDTIS 274
EA + +M +GV DV AY V N GD + ++D M G +P T++
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIK---VLDLMVQKGEEPGTLT 327
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK--E 332
YN ++ CK + MD+A V E + + G P+A T+ T + LCG+G +A ++K
Sbjct: 328 YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLL 387
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
S H PD T L++GL K+ ++ +A
Sbjct: 388 SEKFHVKPDVFTCNNLIQGLCKEGRVHDA 416
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 22/298 (7%)
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
RF+ + L ES N T P A M + G +V + N
Sbjct: 76 RFTSLSALTESFVN----THHP---------------SFAFSVLSLMTKRGFGVNVYNLN 116
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYN-LSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
+L RS DK LF ++ + Y+ + PD ++Y L+ C + +A L M+
Sbjct: 117 LVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMK 176
Query: 196 NKG-VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDP 253
G VTY+ +++C K G E L EME++G+ DV Y+ I+ G GD
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
E +EL DEM + P+ ++Y+ LM + EA ++ + + G P+ +
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LC +G A KV V + P T ++V GL K+ ++ +A GV+ + KK
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 2/214 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI+ + G A R M E+G +++++N L+ +R + L+ + +
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLW-KYAVE 460
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y +++ C A L +M++ G+ T + Y ++ L ++ + E+
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM ++DV ++N+ I T GD + KEL+ EM L PD ++++ L+
Sbjct: 521 ARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILIN 580
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ K M+DEA +YE + G P F + +
Sbjct: 581 RFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLL 614
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 161/345 (46%), Gaps = 24/345 (6%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHK 89
S E D + +++ + + SP Y+ ++ L ++ R+ + +++ +
Sbjct: 228 SAFCGEGDIETGRELFDEMLRRKVSPNVVTYS--CLMQGLGRTGRWREASEMLKDMTARG 285
Query: 90 NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLY 148
P + L + + G+AG A++ D M + G +++N ++ C R+
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAG---DAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMD 342
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT- 207
D ++ E+ K PD ++Y LLK C +G +A++L + ++ V +T
Sbjct: 343 DAFGVV--EMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400
Query: 208 -TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR-- 264
++ L K+G +A R+ S M + G+ ++ YN I ++LI+ ++
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAA-----RKLIEALKLW 455
Query: 265 ----DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
++G P++++Y+ ++ CK +M+ A+ ++ ++++G P + + LC
Sbjct: 456 KYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCRE 515
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ ++A +F+E V+ D + ++++G +K +K AK ++
Sbjct: 516 DSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELL 560
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 123/294 (41%), Gaps = 14/294 (4%)
Query: 66 DLTVRRLAKSKRFSD----IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
++ V L K R D +E +++ K +T L++ AG AM +
Sbjct: 329 NVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYN----TLLKGLCGAGKIHEAMDLWK 384
Query: 122 QM--DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+ ++ V + N L+ C R++D I + + L + ++Y L++ +
Sbjct: 385 LLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMV--EMGLQGNIVTYNFLIEGY 442
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
+ +AL+L G ++TY+ ++N L K A L+ +M+ G+ V
Sbjct: 443 LAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTV 502
Query: 239 AAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN +T+ D E+ + L EMR+ D +S+N ++ K + AK++
Sbjct: 503 IDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSE 562
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ P+A TF I G D+A ++++ V +P L++G
Sbjct: 563 MFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKG 616
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 7/301 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ RF++ LI P + Y C LI+ Y D AM DQM G
Sbjct: 332 LKKALRFAERMVLIGI---APNVV--TYNC-LIKGYCNVHQVDQAMELIDQMPSKGCSPD 385
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+S+ ++ R + +++ L ++ L PD ++Y L++ G D+ALE+L
Sbjct: 386 KVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEIL 445
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
E E +V V Y+ +++ K+G ++A+ L SEM KG D DV Y +
Sbjct: 446 QEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRI 505
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G ++ K+++ +M KP+ ++Y + C+N EA+K+ EE +PNA T+
Sbjct: 506 GKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITY 565
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
++ L G ++A V +E + P+ + LLV L + K +EA +++
Sbjct: 566 SVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMN 625
Query: 371 K 371
K
Sbjct: 626 K 626
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 156/355 (43%), Gaps = 21/355 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+++ + SP Y + + L + KR ++I LI+ + D K+ +
Sbjct: 368 DQAMELIDQMPSKGCSPDKVSYYTVMGL--LCRDKRLNEIRELIKKMQTDSKLLPDHVTY 425
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI+ + G D A+ + ++L + ++A++ A + K L E+
Sbjct: 426 NSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFS 485
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K PD ++Y +L C G D+A +++ +M + VTYTT LN L + G +
Sbjct: 486 K-GCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSL 544
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA ++ + E++ + Y+V + G +++ EM G P+ + N L+
Sbjct: 545 EARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLV 604
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C++ EA ++ + GC+ N F T I+ C + + A + + + +K
Sbjct: 605 HSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKH 664
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPA 394
PD T L++ L K +I+EA + + ++ GLVP+P
Sbjct: 665 PDTVTYTALIDALAKTDRIEEATELTMKMLRQ----------------GLVPSPV 703
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 8/277 (2%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
SY +AG AM+ M + G P I A+ + L K + F E +
Sbjct: 290 SYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNEL--KKALRFAERMVLIGI 347
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
+P+ ++Y L+K +C+ D+A+EL+++M +KG V+Y TV+ L + E
Sbjct: 348 APNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRE 407
Query: 225 LWSEMEKKGVDL-DVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M+ L D YN +++ + +G E L E++ E K D + Y+ ++
Sbjct: 408 LIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEAL-EILQEAEKLRFKVDKVEYSAIVHA 466
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +AK++ + GC P+ T+ + + C G D+A K+ ++ H P+
Sbjct: 467 YCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPN 526
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T + GL + K EA+ ++ +++ + PN +
Sbjct: 527 AVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAI 563
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 42/322 (13%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+E L E+ K K+ + Y ++ +Y + G A +M G V+++ ++L
Sbjct: 442 LEILQEAEKLRFKVDKVEY-SAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLD 500
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
R D+ + ++ K++ P+ ++Y L C +G S +A +++N E +
Sbjct: 501 GFCRIGKLDQAKKMMQQM-YKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWT 559
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG-----VDLDVAAYN------------- 242
+TY+ V++ L ++G EA + EM KG V++++ ++
Sbjct: 560 PNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQL 619
Query: 243 -------------VRITNTYGG-----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
V T G D E L+D+M PDT++Y L+ K
Sbjct: 620 LKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAK 679
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ ++EA ++ + G P+ T+R+ I+ C G + K+ K+ ++ + F T
Sbjct: 680 TDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSR---FQT 736
Query: 345 V-KLLVEGLVKKKKIKEAKGVI 365
L++E L K ++EA ++
Sbjct: 737 AYNLVIEKLCKFGYLEEANSLL 758
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI- 245
A +L M + +++ + V+ + G +A ++ + M+K GV+ +++ N I
Sbjct: 265 AKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIH 324
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + ++ + M G+ P+ ++YN L+ YC +D+A ++ + + GCSP
Sbjct: 325 ILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSP 384
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK-IPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ ++ T + LC ++ ++ K+ K +PD T L++ L K EA +
Sbjct: 385 DKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEI 444
Query: 365 IRTIKK 370
++ +K
Sbjct: 445 LQEAEK 450
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 112/283 (39%), Gaps = 39/283 (13%)
Query: 124 DELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+E TP + I+++ ++ R +L + ++ + I K + P+ + LL+ S C G
Sbjct: 555 EEWWTPNA-ITYSVVVHGLRREGKLNEACDVVREMIGKGF--FPNPVEINLLVHSLCRDG 611
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+A +LL E NKG V V +TTV++ ++ + E A L +M D Y
Sbjct: 612 KPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYT 671
Query: 243 VRITNTYGGDP-ERLKELIDEMRDAGLKPDTISY-------------------------- 275
I D E EL +M GL P ++Y
Sbjct: 672 ALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLK 731
Query: 276 -------NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
N ++ CK ++EA + + +A T + G AYK
Sbjct: 732 SRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYK 791
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKK 370
V + IPD + + + LV + K++EA + V+R +++
Sbjct: 792 VACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVER 834
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 45/98 (45%)
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
++ F+M Y + + +A KV +++ G PN + T I+ L KA + +
Sbjct: 283 AFGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERM 342
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V++ P+ T L++G ++ +A +I + K
Sbjct: 343 VLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSK 380
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 178/378 (47%), Gaps = 52/378 (13%)
Query: 32 KSKLRSEFDPDKALDIYSSVSKHYASPVSSRY-AQDLTV--RRLAKSKRFSDIETLIESH 88
K+ L + +P A ++ + + P+SS + +Q + + R L +SK F++++ L +
Sbjct: 9 KALLNNAHNPKLAWHLFKRI---LSLPISSNHRSQSIPIISRILIRSKMFNELDDLHQLL 65
Query: 89 KNDPKITQEPYLC-NLIRSYGQAGMFDHAMRTFDQMDELGTPR---SVISFNALLFACTR 144
N P + NL+ ++G F+ A+ F + P S+ +N LL +C R
Sbjct: 66 LNSPSLESSDSSLENLVTVLAKSGFFNKAISHFKSLRS-NFPEKQPSIYLYNVLLKSCIR 124
Query: 145 -------SRLYDKVPI----------------------------LFDEIPKKYNLSPDKI 169
S LY + + LFD++P + P++
Sbjct: 125 ENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPAR-GCEPNEF 183
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
++G+L++ +C +G + K LELL +M G+ V Y T+++ K+G +AE+L +M
Sbjct: 184 TFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKM 243
Query: 230 EKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMR---DAGL-KPDTISYNFLMTCYCK 284
+ G+ V +N RI+ G G + +M+ + GL P+ I+Y ++ +CK
Sbjct: 244 REDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCK 303
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
M++EAK + + ++ N N ++ W+ L +G +A+ V KE + + PD +
Sbjct: 304 EGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYS 363
Query: 345 VKLLVEGLVKKKKIKEAK 362
++++GL K + +A+
Sbjct: 364 YNIVMDGLCKNGMLSDAR 381
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 25/311 (8%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLI-RSYGQAGMFDHAMRTFD 121
Y ++ + L K R S+ E L++ N+ + CN+I + G D A+ +
Sbjct: 432 YTCNVLLHSLWKEGRISEAENLLQK-MNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVN 490
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M G+ L + L D+ +PD ++Y ++ C +
Sbjct: 491 GMWTHGSA-------------ALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKA 537
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G D A + EM +KG++ + Y T ++ ++G A ++ +MEK+G + + Y
Sbjct: 538 GRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTY 597
Query: 242 NVRITNTYGGDPERLKEL---IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N I G ++ EL IDEMR+ G+ PD +YN ++ C C+ +++A V + +
Sbjct: 598 NSLILGL--GSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM 655
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV--HKIPDFNTVKLLVEGLVKKK 356
+ G SPN ++FR I C + +F +++VF+ ++ V HK + L+ L+
Sbjct: 656 LQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYT---LMFNELLVGG 712
Query: 357 KIKEAKGVIRT 367
K+ EAK + T
Sbjct: 713 KVAEAKELFET 723
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 143/333 (42%), Gaps = 33/333 (9%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPK-ITQEPY---LCNLIRSYGQAGMFDHAMRTFDQ 122
L + K + +TL+++ K + I E Y L LIR+ G A +
Sbjct: 296 LMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRN----GKLLEAWIVLKE 351
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M +G + S+N ++ ++ + +L + + + PD ++Y LL +C G
Sbjct: 352 MLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRN-GILPDTVTYSTLLHGYCSKG 410
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+A LL+EM + T T +L+ L+K+G EAE L +M +KG +D N
Sbjct: 411 KVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCN 470
Query: 243 VRITN-TYGGDPERLKELIDEMRDAG-----------------------LKPDTISYNFL 278
+ I G ++ E+++ M G PD ++Y+ +
Sbjct: 471 IIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTI 530
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ CK +D+AKK + + G P++ + T+I+ C G A++V K+
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGC 590
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L+ GL K +I E G+I +++K
Sbjct: 591 NKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 163/371 (43%), Gaps = 30/371 (8%)
Query: 27 SVSKAKSKLRSEFDPDKALDIY---------------SSVSKHYASPVSSR-----YAQD 66
++S KS LRS F P+K IY VS Y V +R Y +
Sbjct: 94 AISHFKS-LRSNF-PEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFN 151
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
L + L S D L + E L+R Y +AG+ + QM +
Sbjct: 152 LLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTM 211
Query: 127 GTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G + + +N L+ + C + +D L D++ ++ L P ++ + + C SG
Sbjct: 212 GILPNNVLYNTLISSFCKEGKTHDAEK-LVDKM-REDGLVPHVETFNSRISALCGSGKIL 269
Query: 186 KALELLNEM---ENKGV-EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+A + +M E G+ +TY +L K+G EEA+ L M++ +++ +Y
Sbjct: 270 EASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESY 329
Query: 242 NVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N+ + G ++ EM G++PD SYN +M CKN M+ +A+ + +
Sbjct: 330 NIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIR 389
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NG P+ T+ T ++ C G +A + E + + P+ T +L+ L K+ +I E
Sbjct: 390 NGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISE 449
Query: 361 AKGVIRTIKKK 371
A+ +++ + +K
Sbjct: 450 AENLLQKMNEK 460
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 25/310 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + GM + A D M ++ S+N L R+ + I+ E+
Sbjct: 297 MLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLG-I 355
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD SY +++ C +G A L+ M G+ TVTY+T+L+ +G EA
Sbjct: 356 GIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEA 415
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM + NV + + + G + L+ +M + G DT++ N ++
Sbjct: 416 NNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINA 475
Query: 282 YCKNEMMDEAKKVYEGLEENG-----------------------CSPNATTFRTWIYHLC 318
C N +D+A ++ G+ +G C+P+ T+ T I LC
Sbjct: 476 LCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLC 535
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLR 378
+G D A K F E + PD + ++ KI A V++ ++K+ L+
Sbjct: 536 KAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQ 595
Query: 379 AWKKVEEELG 388
+ + LG
Sbjct: 596 TYNSLILGLG 605
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 28/292 (9%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
GM A M G ++++ LL C++ ++++ +L + I N SP+
Sbjct: 375 GMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISN--NCSPNTY 432
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+ +LL S G +A LL +M KG V TVT ++N L G ++A + + M
Sbjct: 433 TCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGM 492
Query: 230 EKKG--------------VD---------LDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
G VD D+ Y+ I+ G + K+ EM
Sbjct: 493 WTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMS 552
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
GL+PD+ Y+ + +C+ + A +V + +E+ GC+ T+ + I L +
Sbjct: 553 KGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFE 612
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
Y + E PD T ++ L + +I +A V+ ++K PN+
Sbjct: 613 LYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNI 664
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 57/247 (23%)
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDE-- 262
Y +L ++ E L+ +M V + +N+ I G E +EL D+
Sbjct: 115 YNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMP 174
Query: 263 ---------------------------------MRDAGLKPDTISYNFLMTCYCKNEMMD 289
MR G+ P+ + YN L++ +CK
Sbjct: 175 ARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTH 234
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI----PDFNTV 345
+A+K+ + + E+G P+ TF + I LCGSG +A ++F++ + ++ P+ T
Sbjct: 235 DAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITY 294
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKKF-----------------PPNVLRAWKKVEEELG 388
KL++ G K+ ++EAK ++ T+K+ +L AW ++E LG
Sbjct: 295 KLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLG 354
Query: 389 LVPAPAV 395
+ P +
Sbjct: 355 IGIEPDI 361
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 13/260 (5%)
Query: 69 VRRLAKSKRFSD-----IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
+ L K+ R D IE + + + D I I S+ + G A + M
Sbjct: 531 ISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYD-----TFIHSFCREGKISSAFQVLKDM 585
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
++ G +++ ++N+L+ ++ L DE+ +K +SPD +Y +L C+ G
Sbjct: 586 EKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK-GVSPDVCTYNHMLNCLCEGGR 644
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+ A +L+EM KG+ ++ ++ K + + + ++ E+ A Y +
Sbjct: 645 INDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTL 703
Query: 244 RITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
GG KEL + D Y L+ CK+E ++ A V L + G
Sbjct: 704 MFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKG 763
Query: 303 CSPNATTFRTWIYHLCGSGN 322
+ +F I GN
Sbjct: 764 YQFDPASFMPVIDGFGKMGN 783
>gi|53749325|gb|AAU90184.1| unkonwn protein [Oryza sativa Japonica Group]
gi|55168288|gb|AAV44154.1| unknown protein [Oryza sativa Japonica Group]
Length = 395
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 5/248 (2%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNL 164
+ +G D+A FD+M + G +V++F L+ A C RL + + + + +YN+
Sbjct: 93 AVADSGSVDNACLLFDEMLQRGIAPTVVTFGTLVTAFCEAGRLEEAFKVK-EVMSLQYNI 151
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
P+ Y L+K+ C+ G D A L EM N V + Y T+ L++ G E
Sbjct: 152 RPNAHVYASLMKALCEKGKVDDAHRLKEEMVSNSEPLVDSGAYATLARALFRLGKKGEVV 211
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM++KG+ + +N I GD + +D+M+ G KPD++SYN L+
Sbjct: 212 SLLEEMKEKGIKVGREVHNSMIAGFCEDEGDLDAAFAALDDMQKGGCKPDSVSYNTLVGG 271
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +A ++ E + GC P+ T+R +C +G F +A +VF E V P
Sbjct: 272 LCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDAGGFSEARRVFNEMVFKGFAPS 331
Query: 342 FNTVKLLV 349
+ V+ V
Sbjct: 332 KDGVRKFV 339
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 45/321 (14%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
+EP LC +I +YG+A A R PR+ + N LL A R +P L
Sbjct: 15 REPLLCRVISAYGRA-RLPAAARRAFAHPAFPAPRTARALNTLLHALLACRA--PLPELL 71
Query: 156 DEIPKKYNLSPDKISYGLLLKSH-CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
E + + PD +Y +L+++ DSGS D A L +EM +G+ T VT+ T++
Sbjct: 72 SEC-RGSGIHPDACTYNILMRAAVADSGSVDNACLLFDEMLQRGIAPTVVTFGTLVTAFC 130
Query: 215 KQGNAEEAERLWSEM---------------------EKKGVD----------------LD 237
+ G EEA ++ M EK VD +D
Sbjct: 131 EAGRLEEAFKVKEVMSLQYNIRPNAHVYASLMKALCEKGKVDDAHRLKEEMVSNSEPLVD 190
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM-MDEAKKVY 295
AY + G + L++EM++ G+K +N ++ +C++E +D A
Sbjct: 191 SGAYATLARALFRLGKKGEVVSLLEEMKEKGIKVGREVHNSMIAGFCEDEGDLDAAFAAL 250
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
+ +++ GC P++ ++ T + LC G + A ++ ++ PD T + L +G+
Sbjct: 251 DDMQKGGCKPDSVSYNTLVGGLCKMGRWRDASELVEDMPRRGCRPDVVTYRRLFDGICDA 310
Query: 356 KKIKEAKGVI-RTIKKKFPPN 375
EA+ V + K F P+
Sbjct: 311 GGFSEARRVFNEMVFKGFAPS 331
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A D M + G +S+N L+ + + L +++P++ PD ++
Sbjct: 241 GDLDAAFAALDDMQKGGCKPDSVSYNTLVGGLCKMGRWRDASELVEDMPRR-GCRPDVVT 299
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
Y L CD+G +A + NEM KG + + + ++G+A E + ++
Sbjct: 300 YRRLFDGICDAGGFSEARRVFNEMVFKGFAPSKDGVRKFVAWIEREGDAASLESVLCQL 358
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 142/290 (48%), Gaps = 18/290 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+A F+ R +M G V+++N L+ A R+ + +F ++ ++
Sbjct: 73 MIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEE- 131
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD+++Y L+ H +G D A+++ +M+ G + T TY+ +++CL K G EA
Sbjct: 132 GCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEA 191
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ EM ++G + YN+ I G+ +L ++M+DAG PD ++Y+ +M
Sbjct: 192 LKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEV 251
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + EA+ ++ +E+ G P+A + + + N ++A + +++ + P+
Sbjct: 252 LGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPN 311
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVP 391
L+ ++ ++ A GVI T+K AW GLVP
Sbjct: 312 VQISNSLLGSYLRMQQFDLAFGVIETMK---------AW-------GLVP 345
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 4/211 (1%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+ + +AG D+AM + +M + G +++ ++ ++ + LF+E+ +
Sbjct: 141 CTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVE 200
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ +P ++Y +++ SG+ A++L N+M++ G VTY+ ++ L + G+ +
Sbjct: 201 R-GFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQ 259
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFL 278
EAE +++EME+ G D Y V + + +G + ER E +M D+GL P+ N L
Sbjct: 260 EAELMFNEMEQAGWVPDAPIYGVMV-DMWGKARNAERALEWYQKMLDSGLTPNVQISNSL 318
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ Y + + D A V E ++ G P T
Sbjct: 319 LGSYLRMQQFDLAFGVIETMKAWGLVPTLQT 349
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 4/249 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +YG+A AMR F QM E G +++ L+ +++ +D ++ ++ ++
Sbjct: 108 LIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKM-QQA 166
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y +++ +G +AL+L EM +G + VTY +++ K GN A
Sbjct: 167 GFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMA 226
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L+++M+ G D Y++ + G G + + + +EM AG PD Y ++
Sbjct: 227 MKLYNDMQDAGFHPDRVTYSI-MMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVD 285
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ K + A + Y+ + ++G +PN + + FD A+ V + +P
Sbjct: 286 MWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVP 345
Query: 341 DFNTVKLLV 349
T +L+
Sbjct: 346 TLQTHTILL 354
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
+LK +SG + K + E E G + TYTT++ + + N E RL EM ++G
Sbjct: 40 VLKHQKESGLALKFFDWAKEQE--GYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREG 97
Query: 234 VDLDVAAYNVRITNTYG-----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ V YN R+ + YG G+ R + +M++ G PD ++Y L+ + K
Sbjct: 98 CEPCVVTYN-RLIHAYGRANFLGEAMR---IFYQMQEEGCSPDRVTYCTLVDLHSKAGFH 153
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
D A +Y+ +++ G P+ T+ I+ L +G +A K+F+E V P T ++
Sbjct: 154 DNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNII 213
Query: 349 VE 350
++
Sbjct: 214 ID 215
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 137/282 (48%), Gaps = 7/282 (2%)
Query: 100 LCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+CN+ + AG D A+ ++M +G V+++N L+ C R+ D + ++
Sbjct: 198 ICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSM 257
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + PDKISY ++ C LL M + G+ VTY +++ L K G
Sbjct: 258 L--QNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHG 315
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+A+EA E E K +D Y+ + + G KE+I EM G +PD ++Y+
Sbjct: 316 HADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYS 375
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ +C+ +D+A+K+ + + +NGC PN T + LC G +A+++ +S
Sbjct: 376 AVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEE 435
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
P T +++ G ++ K+KE+ V+ + +K FP V
Sbjct: 436 WWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTV 477
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 24/333 (7%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL++ SS+ ++ P Y ++ L K KR +D++ L+E + + L
Sbjct: 250 ALEMISSMLQNGCLPDKISYFTVMSF--LCKEKRVADVQNLLERMSDAGIFPDQVTYNML 307
Query: 104 IRSYGQAGMFDHAMRTFDQ-------MDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
I + G D A+ + +DE+G +V SF C R+ + I+ +
Sbjct: 308 IHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSF------CLNGRMAEAKEIIGE 361
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
I K PD ++Y ++ C G D+A +++ M G + TVT+T +LN L K
Sbjct: 362 MISK--GCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKV 419
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-RLKELID---EMRDAGLKPDT 272
G + EA L ++ E++ Y+V + +G E +LKE D +M G P T
Sbjct: 420 GKSSEAWELLNKSEEEWWTPSAITYSVVM---HGFRREGKLKESCDVVMQMLQKGFFPTT 476
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ N L+ C +AK E + GC N F T I+ G+ + A + +
Sbjct: 477 VEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDD 536
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ ++ PD T ++V+ L +K K+KEA ++
Sbjct: 537 MYLTNRHPDVVTYTVVVDALGRKGKMKEATSLV 569
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 7/283 (2%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYD 149
DP + Y C LI+ A A+ M + G P + F + F C R+ D
Sbjct: 228 DPDVV--TYNC-LIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVAD 284
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+L E + PD+++Y +L+ G +D+AL L E E K V V Y+
Sbjct: 285 VQNLL--ERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSAT 342
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
++ G EA+ + EM KG DV Y+ + G+ ++ ++++ M G
Sbjct: 343 VHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGC 402
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
KP+T+++ L+ CK EA ++ EE +P+A T+ ++ G ++
Sbjct: 403 KPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCD 462
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + + P + LL+ L ++K +AK + + K
Sbjct: 463 VVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSK 505
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 7/247 (2%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
F+ +L +R+RL+D + + ++ + + L+ S+ +G A+ +L M
Sbjct: 129 FDEMLVLLSRTRLHDPARRVMRLMIRR-GMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLM 187
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
+ G +N L G ++A M + GVD DV YN I G
Sbjct: 188 QKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGA--R 245
Query: 255 RLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
R+ E+I M G PD ISY +M+ CK + + + + + E + + G P+ T+
Sbjct: 246 RIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYN 305
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKK 370
I+ L G+ D+A +ES D V ++ EAK +I I K
Sbjct: 306 MLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISK 365
Query: 371 KFPPNVL 377
P+V+
Sbjct: 366 GCRPDVV 372
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 59/337 (17%)
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTR 144
E H DP + + N + GQ + A +QM + G + +FN L+ A CT
Sbjct: 315 EGH--DPDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVDRGCLPDITTFNTLIAALCTG 369
Query: 145 SRLYDKVPI----------------------------------LFDEIPKKYNLSPDKIS 170
+RL + + + LF+E+ K +PD+++
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVT 428
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ + C G KAL+LL +ME+ G +T+TY T+++ L K+ EEAE ++ +M+
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 231 KKGVDLDVAAYNV---------RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+G+ + +N +I + +G LI++M GL+P+ I+YN ++T
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFG--------LINQMISEGLQPNNITYNSILTH 540
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +A + E + NG + T+ T I LC +G A KV + + P
Sbjct: 541 YCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPT 600
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+++ L ++ I++A + R + + PP+ L
Sbjct: 601 PKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 5/314 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALD+ V+ SP Y ++ + L K L E KN E
Sbjct: 373 EEALDLARQVTVKGVSP--DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G A+ M+ G PRS I++N ++ + ++ +FD++ +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 490
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + I++ L+ C D A L+N+M ++G++ +TY ++L KQG+ ++
Sbjct: 491 -GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M G ++DV Y I G + +++ MR G++P +YN ++
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKI 339
+ + +A ++ + E G P+A T++ LC G G +A+ E V I
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669
Query: 340 PDFNTVKLLVEGLV 353
P+F++ ++L EGL+
Sbjct: 670 PEFSSFRMLAEGLL 683
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 158/362 (43%), Gaps = 44/362 (12%)
Query: 33 SKLRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKND 91
+ LR + DPD AL + +++++ +P Y + +R+L ++ L+ + +
Sbjct: 46 TALREQPDPDAALRMLNAALARDDFAPGPEVYEE--IIRKLGAVGALDLMKVLVAEMRRE 103
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMR-TFDQMDEL-GTPRSVISFNALLFACTRSRLYD 149
+ + + + SY +FD A+ +Q+ L G + +N LL
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ ++ E+ + + PD +++ L+K+ C + A+ +L EM ++GV T+TT+
Sbjct: 164 LLESVYSEMGAR-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-------------------G 250
+ ++G+ E A R+ + M + G NV I N Y G
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI-NGYCKLGRVEDALGYIQQEIADG 281
Query: 251 GDPERLK------------------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+P+++ +++D M G PD +YN ++ C CKN ++EAK
Sbjct: 282 FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAK 341
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + + GC P+ TTF T I LC ++A + ++ + PD T +L+ L
Sbjct: 342 GILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINAL 401
Query: 353 VK 354
K
Sbjct: 402 CK 403
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELG 127
+R A+ R +L++ K++ + + L N+ I +G+AG D A + F +M G
Sbjct: 242 IRVFAREGRVDAALSLLDEMKSNS-LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANG 300
Query: 128 TPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
+++ +++ C RL + V LF+ + + + P +Y ++ + +G +
Sbjct: 301 LVLDDVTYTSMIGVLCKADRLNEAVE-LFEHMDQNKQV-PCAYAYNTMIMGYGMAGKFED 358
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A LL KG + V+Y +L+CL ++G +EA + + EM+K + +++ YN+ I
Sbjct: 359 AYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMID 417
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E + D M+DAGL P+ I+ N ++ CK + +D+A ++EGL+ C P
Sbjct: 418 MLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRP 477
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+A T+ + I L G D+AYK++++ + ++IP+ L+ K
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 157/368 (42%), Gaps = 43/368 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A I+ + P + Y + L + R + L E + +I
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCS--LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYT 518
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR++ + G + + +++M LG ++ N + ++ +K LF EI K
Sbjct: 519 SLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEI-KN 577
Query: 162 YNLSPDKISYGLLLKS-----------------------------------HCDSGSSDK 186
PD SY +L+ C SG +K
Sbjct: 578 LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNK 637
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A +LL EM+ KG E T VTY +V++ L K +EA L+ E + KG++L+V Y+ I
Sbjct: 638 AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID 697
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G R+ E +++E+ GL P+ ++N L+ K E + EA ++ +++ C
Sbjct: 698 GF--GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+PN T+ I+ LC F+KA+ ++E P+ T ++ GL K I EA
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADT 815
Query: 364 VIRTIKKK 371
+ K+K
Sbjct: 816 LFEKFKEK 823
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 143/315 (45%), Gaps = 7/315 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R ++ L E + ++ +I YG AG F+ A ++ G S
Sbjct: 315 LCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPS 374
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+S+N +L R D+ F+E+ K + P+ +Y +++ C +G + AL +
Sbjct: 375 VVSYNCILSCLGRKGQVDEALKKFEEMKK--DAIPNLSTYNIMIDMLCKAGKLETALVVR 432
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+ M++ G+ +T +++ L K ++A ++ ++ K D Y I G
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGL--G 490
Query: 252 DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
R+ E L ++M DA P+ + Y L+ + K ++ K+Y + GCSP+
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLL 550
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T++ + +G +K +F+E + IPD + +L+ GLVK EA + T+
Sbjct: 551 LLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM 610
Query: 369 KKKFPPNVLRAWKKV 383
K++ RA+ V
Sbjct: 611 KEQGCVLDTRAYNTV 625
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 159/336 (47%), Gaps = 15/336 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI-TQEPYL 100
++A++++ + ++ P + YA + + + +F D +L+E + I + Y
Sbjct: 322 NEAVELFEHMDQNKQVPCA--YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYN 379
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIP 159
C ++ G+ G D A++ F++M + P ++ ++N ++ C +L + ++ +
Sbjct: 380 C-ILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKL--ETALVVRDAM 435
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K L P+ I+ +++ C + D A + +++K VTY +++ L + G
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA +L+ +M + Y I N + G E ++ +EM G PD + N
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M C K +++ + +++ ++ G P+A ++ I+ L +G +AY++F KE
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGC 615
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V +NTV ++G K K+ +A ++ +K K
Sbjct: 616 VLDTRAYNTV---IDGFCKSGKVNKAYQLLEEMKTK 648
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 136/310 (43%), Gaps = 14/310 (4%)
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+R D+ + + ++T + C +Y M R F+ ++++ S+ F
Sbjct: 105 RRLKDVNNAVNYFRWAERLTDRAH-CR--EAYNSLLMVMARTRKFNCLEQILEEMSIAGF 161
Query: 136 N-------ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++ + +SR + F + +K P +Y L+ + S SD L
Sbjct: 162 GPSNNTCIEIVLSFIKSRKL-REAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
L +M+ G V +TT++ ++G + A L EM+ ++ DV YNV I +
Sbjct: 221 TLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCI-DC 279
Query: 249 YG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+G G + + EM+ GL D ++Y ++ CK + ++EA +++E +++N P
Sbjct: 280 FGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPC 339
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
A + T I +G F+ AY + + IP + ++ L +K ++ EA
Sbjct: 340 AYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFE 399
Query: 367 TIKKKFPPNV 376
+KK PN+
Sbjct: 400 EMKKDAIPNL 409
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LAK R + L E K+ +LI +G+ G D A +++ + G +
Sbjct: 664 LAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 723
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V ++N LL A ++ + + F + K +P+ I+Y +L+ C +KA
Sbjct: 724 VYTWNCLLDALVKAEEISEALVCFQSM-KDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
EM+ +G + TYTT+++ L K GN EA+ L+ + ++KG D A YN I
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842
Query: 252 D-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ L +E R G T + L+ K E +++A V L E + +A
Sbjct: 843 NRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQHAA-- 900
Query: 311 RTW 313
R+W
Sbjct: 901 RSW 903
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 42/317 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A F M E G ++N ++ +S +K L +E+ K
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++YG ++ D+A L E ++KG+E+ V Y+++++ K G +EA
Sbjct: 650 H-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--------ERLKEL--------------- 259
+ E+ +KG+ +V +N + + + +K+L
Sbjct: 709 YLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHG 768
Query: 260 -------------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
EM+ G KP+ +Y +++ K + EA ++E +E G +
Sbjct: 769 LCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVAD 828
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK---G 363
+ + I L + AY++F+E+ + T +L++ L K + I++A
Sbjct: 829 SAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGA 888
Query: 364 VIRTIKKKFPPNVLRAW 380
V+R K + R+W
Sbjct: 889 VLRETAK--AQHAARSW 903
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 137/274 (50%), Gaps = 8/274 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR A D A+ +M E G +V+ +++LL +S ++ V +F E+ +K
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK- 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD + Y L+ S C G + KA +++ M +G+E VTY ++NC+ K+G+ +EA
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAG--LKPDTISYNF 277
+ +M +KGV DV YN I D + E L++EM +KP+ +++N
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGL--SDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS 332
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C M +A +V +EE GC N T+ I L KA ++ E +
Sbjct: 333 VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLG 392
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +L++G K ++ A+ ++ T++ +
Sbjct: 393 LEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 6/268 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I+ G A + M+E G +++++N L+ R K L DE+
Sbjct: 332 SVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM-TS 390
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y +L+K C D+A +LL+ M ++G+E Y +L + +QG E
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L++EM+ LDV AY+ I GD + KEL+ + D GL PD ++Y+ ++
Sbjct: 451 ARNLFNEMDNN-FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVIN 509
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ K+ M+ A V + + +G P+ F + I G +K ++ +E + +
Sbjct: 510 MFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIAL 569
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D + L LV E K +++++
Sbjct: 570 DSKIISTLSTSLVAS---NEGKALLQSL 594
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 40/279 (14%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS--PDKISY--------- 171
+D L + R +S+N +L A R +D+ L + + + + P+ +SY
Sbjct: 68 LDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCA 127
Query: 172 --------------------------GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
G L++ CD+ DKA+EL+ EM G+E V
Sbjct: 128 DRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVV 187
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMR 264
Y+++L K G E+ +++ EM +KG++ DV Y I + G ++ ++D M
Sbjct: 188 YSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMV 247
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
GL+P+ ++YN L+ C CK + EA V + + E G +P+ T+ T I L D
Sbjct: 248 RRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMD 307
Query: 325 KAYKVFKESVMVHKI--PDFNTVKLLVEGLVKKKKIKEA 361
+A + +E V I P+ T +++GL ++++A
Sbjct: 308 EAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQA 346
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 156/335 (46%), Gaps = 17/335 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLIESHKN--DPKITQEP 98
DKA+++ + + P Y+ L + KS R+ D+ + +E + +P +
Sbjct: 167 DKAVELMGEMCESGIEPNVVVYSSLL--QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYT 224
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDE 157
LI S + G A D M G +V+++N L+ C + + + +L +
Sbjct: 225 ---GLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVL-KK 280
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG--VEVTTVTYTTVLNCLYK 215
+ +K ++PD ++Y L+K D D+A+ LL EM V+ VT+ +V+ L
Sbjct: 281 MSEK-GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCD 339
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER-LKELIDEMRDAGLKPDTIS 274
G +A ++ + ME+ G +++ YN+ I R EL+DEM GL+PD+ +
Sbjct: 340 IGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFT 399
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y+ L+ +CK +D A+ + + + G P + + +C G ++A +F E
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE-- 457
Query: 335 MVHKIP-DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
M + P D ++ G K +K AK ++++I
Sbjct: 458 MDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME---NKGVEVTTVTYTTVL 210
L D +P D +SY +L + C G D+A LL M + V+YT ++
Sbjct: 67 LLDALPSVR----DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLK 269
L A++A L M GV DV Y I + ++ EL+ EM ++G++
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ + Y+ L+ YCK+ ++ KV+ + E G P+ + I LC G KA+ V
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
V P+ T +L+ + K+ +KEA GV++ + +K P+V+
Sbjct: 243 MDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 140/337 (41%), Gaps = 39/337 (11%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
++ K+K+ + ++ +P + L N + + G A+ +M E G
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM---CKEGSVKEAIGVLKKMSEKGVAP 288
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNL-SPDKISYGLLLKSHCDSGSSDKALE 189
V+++N L+ + D+ L +E+ + N+ P+ +++ +++ CD G +A +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
+ ME G V VTY ++ L + +A L EM G++ D Y++ I
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN------- 301
+R ++L+ MRD G++P+ Y L+ C+ MM+ A+ ++ ++ N
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVA 468
Query: 302 ---------------------------GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
G +P+A T+ I SG+ + A V K+
Sbjct: 469 YSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMT 528
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+PD L++G K +I + +IR + K
Sbjct: 529 ASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 151/333 (45%), Gaps = 41/333 (12%)
Query: 85 IESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
+E + P EP + + +++ A +D +M +G P +V +FN L+
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAY 257
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
R+ L+++V ++P+ + +PD Y ++ C G + A ++L+ M + G++
Sbjct: 258 LCRNGLFEQVHEALSQMPE-HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKP 316
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELI 260
V Y TVL L EEAE L +EM ++ LD +N+ + G +R+ EL+
Sbjct: 317 NVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELL 376
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEA----------------------------- 291
++M + G PD I+Y ++ +CK ++DEA
Sbjct: 377 EQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRA 436
Query: 292 ------KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+++ + + GC PN TF T I +C G ++A ++ K+ ++ PD +
Sbjct: 437 ERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISY 496
Query: 346 KLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
+++GL K K +EA ++ I K PN +
Sbjct: 497 STVIDGLGKAGKTEEALELLNVMINKGITPNTI 529
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 147/321 (45%), Gaps = 4/321 (1%)
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIR 105
DI S + + P Y + ++ L ++R+ + E L+ + + L+
Sbjct: 304 DILSRMPSYGLKPNVVCY--NTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
+ Q G+ D + +QM E G VI++ ++ + L D+ +L +
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM-SACGCK 420
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ ISY ++LK C + A EL++ M +G VT+ T++N + K+G E+A L
Sbjct: 421 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIEL 480
Query: 226 WSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M G D+ +Y+ I G E EL++ M + G+ P+TI Y+ + + +
Sbjct: 481 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 540
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
D+ ++++ +++ +A + I LC D+A F V +P+ +T
Sbjct: 541 EGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 600
Query: 345 VKLLVEGLVKKKKIKEAKGVI 365
+L+ GL + ++EA+ ++
Sbjct: 601 YTILIRGLASEGLVREAQDLL 621
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 121/277 (43%), Gaps = 9/277 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIRS AG A R +D G V+++NA++ R+ L +P
Sbjct: 50 LIRSLCAAGRTADAARA---LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP--- 103
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y +++S C G AL +L+EM +G T +L + G A
Sbjct: 104 -VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R + KG LD N+ ++ G + EL+ ++ G +PD +SYN ++
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + D+ +++ + GC PN TF T I +LC +G F++ ++ + PD
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+++G+ K + A ++ R PNV+
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVV 319
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G+ D A+ M G + IS+ +L R+ + L + ++
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +++ L+ C G ++A+ELL +M G ++Y+TV++ L K G EEA
Sbjct: 454 CL-PNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 512
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L + M KG+ + Y+ + + G +++ ++ D ++DA ++ D YN +++
Sbjct: 513 LELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISS 572
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-----SVMV 336
CK D A + + NGC PN +T+ I L G +A + E +V
Sbjct: 573 LCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRK 632
Query: 337 HKIPDFNTV 345
H + F V
Sbjct: 633 HLVRHFGIV 641
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 21/338 (6%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
K L SK ++S V R TV L+K F IE I S L
Sbjct: 57 KPLPCIVEFSKLFSSIV--RMGHYETVVYLSKEIEFLGIEQDIHS------------LSI 102
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + D + ++ +LG S+++F LL D+V +L+D++ +
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR- 161
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y +++ S SG +++AL L +ME G V Y+T+++ +G +EA
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
++ M KG +V Y + N Y ER++E L+DE GL PD +++ ++
Sbjct: 222 RSVFDLMVSKGCTPNVYTYT-SLMNGYC-KIERIEEAVQLLDETLRKGLVPDIVTFTTII 279
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ C+ A++++ + +G +PN T+ + LC GN ++A+ +F+E
Sbjct: 280 SGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVK 339
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
P+ +L++ L K KIK+ K + R I + PNV
Sbjct: 340 PNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L S + G ++ + +++ LG + + S + L+ C R+ + +L + K
Sbjct: 68 LFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL--K 125
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P +++ LL C G D+ + L ++M +G++ TY ++N L K G A E
Sbjct: 126 LGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANE 185
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +MEK G +V Y+ I G + + + D M G P+ +Y LM
Sbjct: 186 ALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMN 245
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK E ++EA ++ + G P+ TF T I LC +G A ++F+ P
Sbjct: 246 GYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTP 305
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ T +L++GL K ++EA + + +++ PN++
Sbjct: 306 NIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 144/297 (48%), Gaps = 18/297 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I S ++G + A+ QM+++G +V++++ L+ C R ++ D+ +FD + K
Sbjct: 173 IINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQM-DEARSVFDLMVSK 231
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P+ +Y L+ +C ++A++LL+E KG+ VT+TT+++ L + G
Sbjct: 232 -GCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLA 290
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++L+ + G ++ Y V + G+ E L EM+ + +KP+ + Y L+
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILID 350
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + + K+++ L + G PN T+ + LC G +A+K+F++ P
Sbjct: 351 SLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI--------------RTIKKKFPPNVLRAWKKV 383
D ++++G ++ K A+ ++ R + FP N + A K +
Sbjct: 411 DKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDFPTNDIPALKTL 467
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 8/281 (2%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---YLCNLIRSYGQAGM 112
+ P S + ++ L + ++ + E + E N+ + + +P +I Y +AG
Sbjct: 204 SGPQPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGD 263
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A + F QM E G P S ++FN+L+ T Y +V ++D++ ++ L PD +SY
Sbjct: 264 YAQARKLFAQMSERGIPLSTVTFNSLMSFETE---YKEVSNIYDQM-QRAGLKPDVVSYS 319
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+K++ + ++AL + EM + GV T +Y +L+ G EEA ++ M +
Sbjct: 320 LLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANTVFRAMRRH 379
Query: 233 GVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V+ D+ +Y + + ++ +++ GLKP+ + Y LM Y K +++
Sbjct: 380 RVEPDLCSYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKV 439
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+VYE + G PN T + T + + +F A FKE
Sbjct: 440 MRVYERMRIQGVEPNQTIYTTIMDAQGRNSDFGNAVIWFKE 480
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG+ G F A R M++ G SVIS L+ A R + Y K +F + +
Sbjct: 146 LVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRM-QTS 204
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGNA 219
P ++Y ++LKS + +A + ++ N+ + + ++ K G+
Sbjct: 205 GPQPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDY 264
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L+++M ++G+ L +N ++ + + + + + D+M+ AGLKPD +SY+ L+
Sbjct: 265 AQARKLFAQMSERGIPLSTVTFNSLMS--FETEYKEVSNIYDQMQRAGLKPDVVSYSLLI 322
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K +EA V+E + + G P ++ + SG ++A VF+ ++ H++
Sbjct: 323 KAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANTVFR-AMRRHRV 381
Query: 340 -PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD + +V V ++ A+ R IK+ PNV+
Sbjct: 382 EPDLCSYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVV 421
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP--- 159
LI++YG+A + A+ F++M + G + S+N LL A S L ++ +F +
Sbjct: 321 LIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVEEANTVFRAMRRHR 380
Query: 160 -------------------------------KKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
K+ L P+ + YG L+K + + +K +
Sbjct: 381 VEPDLCSYTTMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVM 440
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
+ M +GVE YTT+++ + + A + EME +G D A N+ ++
Sbjct: 441 RVYERMRIQGVEPNQTIYTTIMDAQGRNSDFGNAVIWFKEMEARGYPPDQKAKNILLS 498
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 41/298 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LIR + AG D A++ ++M G + + L+ C R+ + + F + K
Sbjct: 15 LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE-HFRAMAK- 72
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +PD ++Y L+ + C +G D+A +L EM +G TVT++T+++ L K G+ E+
Sbjct: 73 -DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQ 131
Query: 222 AERLWSEMEKKGVDLDVAAYNV---RITNTYGG--------------------------- 251
A R+ ++ ++G+ AA+ R+ N Y
Sbjct: 132 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 191
Query: 252 -------DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
D + +L++ M + G P+ ++ L+T CK + EA+++ E + GCS
Sbjct: 192 NGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCS 251
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
PN T+ T I LC G D AY++F+ + P+ T +L++GL K K+I+EA+
Sbjct: 252 PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 133/303 (43%), Gaps = 39/303 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++ AG A+ F M + P V+++ AL+ A ++ +D+ + E+ +
Sbjct: 50 LMKGLCDAGRVVEALEHFRAMAKDCAP-DVMTYTALVHALCKAGKFDEAQGMLREMIAR- 107
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG---------------------VEV 201
+PD +++ L+ C GS ++A +L ++ +G VE+
Sbjct: 108 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 167
Query: 202 ---------------TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
T + + V+N K + + A +L M +KG +V + + IT
Sbjct: 168 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227
Query: 247 NTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ ++L+++M G P+ ++Y+ ++ CK +D+A ++++ +E C P
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 287
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T I LC + ++A +++ PD T L++GL K ++ EA +
Sbjct: 288 NVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLF 347
Query: 366 RTI 368
+TI
Sbjct: 348 QTI 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 72/284 (25%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV--------------------- 204
P+K +YG+L++ +G D A++LL EM++ G E V
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 205 -------------TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT--Y 249
TYT +++ L K G +EA+ + EM +G D ++ I +
Sbjct: 67 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 250 GGDPERLKELIDEMR------DA-----------------------------GLKPDTIS 274
G + + + L D ++ DA G P +
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+N ++ +CK + +D A K+ E + E GC PN TF I LC + +A ++ ++ V
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T ++ GL K+ ++ +A + + ++++ PPNV+
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVV 290
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 156/356 (43%), Gaps = 20/356 (5%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
++ S + L + D A +++ + + P + ++ + L K+KR + L
Sbjct: 255 VTYSTVINGLCKQGQVDDAYELFQLMERRNCPP--NVVTHNILIDGLCKAKRIEEARQLY 312
Query: 86 ----ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLF 140
E+ IT + L +S+ D A + F + E G + + ++++ L
Sbjct: 313 HRMRETGCAPDIITYNSLIDGLCKSF----QVDEAFQLFQTIPESGVSAANAVTYSTLFH 368
Query: 141 A-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
R+ D I + K + SPD +Y L+ +C + + + +EL+ EM +KG
Sbjct: 369 GYAALGRMADACRIFSMLVDKGF--SPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 426
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER---- 255
T + VL L++ + E A +L+ M +G D YN+ +
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALA 486
Query: 256 -LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
L+++ID+ RD P + + + L+ C+ D+AK++ + E G + +++ +
Sbjct: 487 VLEQVIDK-RDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLL 545
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
L +D+A +VF+ V P+ +TV +++ L K+ +A +++ + K
Sbjct: 546 SGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 601
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 99/237 (41%), Gaps = 36/237 (15%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN--LSPDKISY 171
+ A++ FD M G + +N ++ R+ ++K + +++ K + +P +
Sbjct: 447 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAV 506
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L++S C G +D A +LL++M +G +Y +L+ L + +EA +++
Sbjct: 507 DALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVF----- 561
Query: 232 KGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+ M AG P+ + N +++ C +D+A
Sbjct: 562 -----------------------------EAMVSAGPAPEISTVNVVISWLCSAAKVDDA 592
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
++ + + + GC P+ T T I C SG D A K+ +E P+ T LL
Sbjct: 593 YELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 165/342 (48%), Gaps = 11/342 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP--YL 100
K +D + + KH + P + Y ++ L K+ ++ ++ K EP L
Sbjct: 32 KVMDEFQELDKHGSKP--NAYTYKCVIQSLVKA---GNVVLAMDFLDKMIKTGLEPDTLL 86
Query: 101 CNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
N++ G+A M D A + F M +G P ++ L+ + R + ++ +LFDE+
Sbjct: 87 YNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEME 146
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ +P +Y ++ +C +G + A+ +L +M +K + T +++ + + G
Sbjct: 147 ER-GCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRT 205
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E A ++ M+K GV ++ ++N + G + +DEM G+KP++I++N L
Sbjct: 206 ELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTL 265
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C + + EA KV + + G +P+ T+ I +GN KA+++F +
Sbjct: 266 INCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGC 325
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRA 379
+ T LL++ LVK + ++A+ + +KKK P+ + A
Sbjct: 326 SANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITA 367
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 6/249 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LIRS G+ + A FD+M+E G TP + N + C R+ + +L + K
Sbjct: 125 LIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDK- 183
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL+PD + L+ + +G ++ A E+ M+ GV V TV++ +L+C K G
Sbjct: 184 -NLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGL 242
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD--PERLKELIDEMRDAGLKPDTISYNFLM 279
A + EME +G+ + +N I N G +++ EMR AGL PD +Y ++
Sbjct: 243 AYQFMDEMEARGIKPNSITFNTLI-NCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMI 301
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K M +A +++ +E+ GCS N T+ I L +G + A ++ + +
Sbjct: 302 EAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGIL 361
Query: 340 PDFNTVKLL 348
PD T +L
Sbjct: 362 PDAITATVL 370
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 133/264 (50%), Gaps = 4/264 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG + A M ++G ++++N LL + + + + E+ +
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS- 284
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALE-LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D SY LLK HC DK ++ EME +G V+Y+T++ + N +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRK 343
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL+ EM +KG+ ++V Y I G+ K+L+D+M + GL PD I Y ++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ +D+A V+ + E+ +P+A ++ + I LC SG +A K+F++ P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGV 364
D T K ++ GL++ KK+ A V
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKV 487
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 36/305 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG A+ ++ M G + AL+ +R D + E K
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + Y L+ C +G +KA L + M G E VTY +LN Y + A
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI------------------------------------T 246
E + +EM + G+ LD +YN + T
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIET 334
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + L +EMR G+ + ++Y L+ + + AKK+ + + E G SP+
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ T + HLC SGN DKAY VF + + PD + L+ GL + ++ EA +
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 367 TIKKK 371
+K K
Sbjct: 455 DMKGK 459
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 9/246 (3%)
Query: 93 KITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
KI EP L L+ Y M A +M G S+N LL R D
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 150 KV-PILFDEI-PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
K + E+ P+ + D +SY L+++ C + ++ KA L EM KG+ + VTYT
Sbjct: 308 KCYNFMVKEMEPRGF---CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDA 266
+++ ++GN+ A++L +M + G+ D Y + + G+ ++ + ++M +
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ PD ISYN L++ C++ + EA K++E ++ C P+ TF+ I L A
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Query: 327 YKVFKE 332
YKV+ +
Sbjct: 485 YKVWDQ 490
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 42/272 (15%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRL-------YDKV 151
+ NL++S GM D+A++ FD+M +N + R SR +D
Sbjct: 16 IANLVKS----GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 152 PILFDEIP-------------KKYNLS-------------PDKISYGLLLKSHCDSGSSD 185
P+ F IP KK++L PD ++ + L C
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD---VAAYN 242
A++ M +G E V+YT ++N L++ G +A +W+ M + GV D AA
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 243 VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
V + + D + + +E++ A +K T+ YN L++ +CK +++A+ + + + G
Sbjct: 192 VGLCHARKVDLA-YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
C P+ T+ + + + +A V E V
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Query: 115 HAMRTFDQMDELGTPRS---VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
H + ++ M + PR V+S++ L+ R+ K LF+E+ +K + + ++Y
Sbjct: 305 HPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQK-GMVMNVVTY 363
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+K+ G+S A +LL++M G+ + YTT+L+ L K GN ++A ++++M +
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+ D +YN I+ G +L ++M+ PD +++ F++ + + +
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 291 AKKVYEGLEENG 302
A KV++ + + G
Sbjct: 484 AYKVWDQMMDKG 495
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
L E + + +LI+++ + G A + DQM ELG I + +L
Sbjct: 347 LFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLC 406
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+S DK +F+++ + + ++PD ISY L+ C SG +A++L +M+ K
Sbjct: 407 KSGNVDKAYGVFNDMIE-HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDE 465
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+T+ ++ L + A ++W +M KG LD
Sbjct: 466 LTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 1/199 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L +++Y + + SG D A+++ +EM + V + Y + L ++ E AE
Sbjct: 5 LGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAE 64
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCY 282
++ +M+ G L Y+ I+ + + L+ +M G PD ++N +
Sbjct: 65 AIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLL 124
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ + A + + + + G P+ ++ I L +G A +++ + PD
Sbjct: 125 CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN 184
Query: 343 NTVKLLVEGLVKKKKIKEA 361
LV GL +K+ A
Sbjct: 185 KACAALVVGLCHARKVDLA 203
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 6/259 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A ++ EL +V+ FN ++ C + L++ + K PD +Y +
Sbjct: 281 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSI 335
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A+ LL EME KG VTYT VL+ K G ++ L EM KG
Sbjct: 336 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 395
Query: 234 VDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ L+ YN I G + LI EMR G PD SYN ++ C NE M+EA+
Sbjct: 396 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 455
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++E L E G N T+ T I+ L G + A ++ KE ++ D + L++ +
Sbjct: 456 HMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 515
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K + + ++ + +K
Sbjct: 516 CKDGNVDRSLVLLEEMAEK 534
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ S+ + GM+D ++M G + +N +++A + D+ L E+ +
Sbjct: 371 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQ 429
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD SY ++ C++ ++A + + +GV +TY T+++ L + G ++A
Sbjct: 430 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 489
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL EM G LDV +YN I G+ +R L++EM + G+KP+ +SYN L++
Sbjct: 490 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 549
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +A ++ + + G +P+ T+ T I LC G A + ++ + PD
Sbjct: 550 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 609
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L+ K + + +A
Sbjct: 610 IITYNILISWHCKVRLLDDA 629
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 6/226 (2%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L+ + + + P ++G+ ++ C G +D+AL LL M G V Y TV++ L
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDT 272
QG EA L +EM G DV ++ + G G L+D M G P
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++Y FL+ C+ DEA+ + + E N F T I G +A ++++
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYET 320
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ PD +T +L+ GL K +I A ++R ++KK F PNV+
Sbjct: 321 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 366
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 2/232 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++ +AG D A++ FDQM G SVI+FN L+ AC R+ D+ +F + +
Sbjct: 169 SLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRL-SQ 227
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP+ ++ L+ SH G D+A L EM +G+E VTY+ ++N + G
Sbjct: 228 AGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLAR 287
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + EM G++ +V + I G + E +L EMR+ G P+ ++ + LM
Sbjct: 288 AFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMD 347
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
K + +D A V E + + G P T+ + + G D+A V E
Sbjct: 348 ACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCARLGQADRAGIVLDE 399
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 137/271 (50%), Gaps = 11/271 (4%)
Query: 101 CNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL---FACTRSRLYDKVPILFD 156
CN+ +R+ G AG D + ++ M ++++F+ L+ AC R RL ++ F
Sbjct: 97 CNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAER---FFR 153
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ + ++PD + L+ + +GS D+AL++ ++M GV + +T+ T+++ +
Sbjct: 154 EM-LEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRA 212
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISY 275
G+ + A +++S + + G+ + ++ I ++ G + + EMR GL+P+ ++Y
Sbjct: 213 GDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTY 272
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG-NFDKAYKVFKESV 334
+ L+ + + A + + + G PN T+ T I CG G + ++K+FKE
Sbjct: 273 SALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLI-DACGKGKELEWSFKLFKEMR 331
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+P+ T L++ +K ++ A V+
Sbjct: 332 ERGTVPNGVTCSALMDACLKADELDLAFAVL 362
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G A R F +M E G V + N+L+ A ++ D+ +FD++ +Y
Sbjct: 135 LISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQM-SRY 193
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P I++ L+ + +G D+A ++ + + G+ T++ +++ QG +EA
Sbjct: 194 GVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEA 253
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
EM +G++ + Y+ I N G G R + +DEM G++P+ +++ L+
Sbjct: 254 FSWLQEMRARGLEPNRVTYSALI-NACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLID 312
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K + ++ + K+++ + E G PN T + + D A+ V + + V P
Sbjct: 313 ACGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEP 372
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T L+ + + A V+ + K+ P
Sbjct: 373 TEVTYTSLLTQCARLGQADRAGIVLDELNKRRP 405
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM----ENKGVEVTTVT 205
+V ++F E+ + + PD +Y L+ + D G D+AL ++ M E G++ VT
Sbjct: 877 RVFLVFQEM-RSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVT 935
Query: 206 YTTVLNCLYKQ--GNAEEAERLWSEMEKKGVDLDVAAYNVRIT-------NTYGGDPERL 256
YT+++ + EEAE +++ M+++ A +T + D R
Sbjct: 936 YTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRA 995
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
E+ + AG+ P S + +D A +VY+ + E G PN+ + +
Sbjct: 996 LEIWRQQLSAGVAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLV-N 1054
Query: 317 LCGSGNFDK-AYKVFKE 332
LC + A ++ +E
Sbjct: 1055 LCRANGLQSVAARIMRE 1071
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELL--NEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD ++ LLL + +G+ DKA+EL+ + E G E+ +TY+ +L + A
Sbjct: 574 SPDGETWLLLLNAVDTAGALDKAVELMERSRAEGHGSEINELTYSALLGACGRAKKLARA 633
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R+ M + GV Y + + D + E+ + M G++P SY L+
Sbjct: 634 FRIVQSMRETGVKPTEGTYLALMEVCRHSRDSKAAVEVFEAMETEGVRPGVRSYTSLLKA 693
Query: 282 YC-KNEMMDEAKKVYEGLEENGCSPNATTFR 311
+N + A + LE P+++ R
Sbjct: 694 ISEENTLRTRALQRTRMLETRRSPPSSSAVR 724
>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
Length = 540
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 7/260 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+IR AG F A +M+ LG +S ++ +L A + D+ F + +
Sbjct: 10 VIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFHSVSPRS 69
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L D +SY L+ DSG D A EL EM + G + V YT ++N L+K ++A
Sbjct: 70 DL--DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQ-CVVAYTAIINALFKAHRPDQA 126
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M + D D+ + V IT G R E+ EM G KPD I Y L+
Sbjct: 127 IACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDG 186
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K MMDEA+K+ + + G P T+ ++I LC +G ++A K+ +E + K+
Sbjct: 187 LSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVRE---MGKMCA 243
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+ + G V + KI+EA
Sbjct: 244 AEVLHCIFGGYVLEGKIEEA 263
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 17/276 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +AG + A F +M+ G +I + +L+ +++ + D+ L EI +
Sbjct: 148 VITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSR- 206
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK----QGN 218
+ P +++Y + C +G ++A +L+ EM + VL+C++ +G
Sbjct: 207 GMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGK-------MCAAEVLHCIFGGYVLEGK 259
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNF 277
EEA L EM KKGV LDV Y I Y + +E+ + M G PDT +Y
Sbjct: 260 IEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGM 319
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+++ +CK M A KV E ++ G N + + + G +A V+ S M+
Sbjct: 320 IVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVY--STMLR 377
Query: 338 KI--PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
K+ P T +L+ GL K + +A+ V+R ++++
Sbjct: 378 KMVKPSIVTYNILMLGLCKLGQTADARLVLREMRER 413
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 7/205 (3%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D SY ++++ C +G +A ELL EME G++ + VT+ +L L ++ ++A +
Sbjct: 3 DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYC 283
+ + DLDV +Y I D R+ EL +EM +G + ++Y ++
Sbjct: 63 HSVSPRS-DLDVVSYTTLIMGL--ADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALF 118
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K D+A +E + C P+ TF I LC +G ++A +VF+E PD
Sbjct: 119 KAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDII 178
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTI 368
LV+GL K + EA+ +++ I
Sbjct: 179 VYTSLVDGLSKASMMDEARKLLQEI 203
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 40/308 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R + L+ + K+ L + Y G + A+ D+M + G
Sbjct: 222 LCKNGRVEEAGKLV---REMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLD 278
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V + L+ R D+ +F+ + ++ PD +YG+++ C G A +++
Sbjct: 279 VRCYTNLIHGLFYVRRNDEAQEMFEAMVRQ-GCVPDTRTYGMIVSHFCKQGKMQAACKVV 337
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
M+ G+E Y ++++ A EA ++S M +K V
Sbjct: 338 EIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMV----------------- 380
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLEENGCSPNATTF 310
KP ++YN LM CK +A+ V E E +G P ++
Sbjct: 381 -----------------KPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSY 423
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-K 369
RT I+ L +G D+A VF E V +PD + L++ L ++ EA ++R + +
Sbjct: 424 RTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPR 483
Query: 370 KKFPPNVL 377
P+ L
Sbjct: 484 MGITPDAL 491
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 34/182 (18%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
S++++N L+ + ++ E+ ++ + P +SY L+ +G +D+A+++
Sbjct: 383 SIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDV 442
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
EM + GV + T+++ L +EA +L +M + G+ D AYN + G
Sbjct: 443 FTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCG 502
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G A + P +++ L+ EMMD N C P+ +TF
Sbjct: 503 G--------------AKVGP---AWDVLV------EMMD-----------NSCVPDGSTF 528
Query: 311 RT 312
R
Sbjct: 529 RA 530
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 6/259 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A ++ EL +V+ FN ++ C + L++ + K PD +Y +
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSI 351
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A+ LL EME KG VTYT VL+ K G ++ L EM KG
Sbjct: 352 LMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 234 VDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ L+ YN I G + LI EMR G PD SYN ++ C NE M+EA+
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 471
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++E L E G N T+ T I+ L G + A ++ KE ++ D + L++ +
Sbjct: 472 HMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 531
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K + + ++ + +K
Sbjct: 532 CKDGNVDRSLVLLEEMAEK 550
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ S+ + GM+D ++M G + +N +++A + D+ L E+ +
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQ 445
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD SY ++ C++ ++A + + +GV +TY T+++ L + G ++A
Sbjct: 446 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 505
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL EM G LDV +YN I G+ +R L++EM + G+KP+ +SYN L++
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +A ++ + + G +P+ T+ T I LC G A + ++ + PD
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L+ K + + +A
Sbjct: 626 IITYNILISWHCKVRLLDDA 645
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 7/265 (2%)
Query: 116 AMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ DQ+ G S S+N +L R+ + L+ + + + P ++G+
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
++ C G +D+AL LL M G V Y TV++ L QG EA L +EM G
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 235 DLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV ++ + G G L+D M G P ++Y FL+ C+ DEA+
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + E N F T I G +A ++++ + PD +T +L+ GL
Sbjct: 302 MLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNVL 377
K +I A ++R ++KK F PNV+
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVV 382
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 154/381 (40%), Gaps = 79/381 (20%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y A+ DQM + + ++FN L+
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + + PD +YG ++ C G D AL LL +ME +E V YTT+
Sbjct: 203 EAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYG--GDPERL--------- 256
++ L N +A L++EM+ KG+ +V YN +R YG D RL
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 257 -----------------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
++L DEM + PD +Y+ L+ +C ++ +DEAK
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 294 VYEGLEENGCSPNATTFRTWIYHLC----------------------------------- 318
++E + C PN T+ T I C
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+G+ D A K+FK+ V PD T +L++GL K K+++A V ++K K P++
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 378 RAWKKVEEELGLVPAPAVGDG 398
+E G+ A V DG
Sbjct: 502 TYNIMIE---GMCKAGKVEDG 519
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR G + A R M E +V++F+AL+ A + + L+DE+ K+
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ PD +Y L+ C D+A + M +K VTY T++ K EE
Sbjct: 355 -SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM ++G+ + YN I + GD + +++ +M G+ PD I+Y+ L+
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +++A V+E L+++ P+ T+ I +C +G + + +F + P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ ++ G +K +EA + R +K+
Sbjct: 534 NVIIYTTMISGFCRKGLKEEADALFREMKE 563
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 148/315 (46%), Gaps = 12/315 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
+ AL++++ + P Y +R L R+SD L+ K +P +
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNS--LIRCLCNYGRWSDASRLLSDMIERKINPNVVT-- 327
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
LI ++ + G A + +D+M + + ++++L+ C RL D+ +F+
Sbjct: 328 -FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFEL 385
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K + P+ ++Y L+K C + ++ +EL EM +G+ TVTY T++ L++ G
Sbjct: 386 MISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYN 276
+ + A++++ +M GV D+ Y++ + G E+ + + ++ + ++PD +YN
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK +++ ++ L G PN + T I C G ++A +F+E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 337 HKIPDFNTVKLLVEG 351
+P+ T L+
Sbjct: 565 GTLPNSGTYNTLIRA 579
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M L + S+N L+ C RS+L + +L +
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 145
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ LL +C +A+ L+++M + TVT+ T+++ L+ A E
Sbjct: 146 Y--EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M +G D+ Y + GD + L+ +M ++ D + Y ++
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + +++A ++ ++ G PN T+ + I LC G + A ++ + + P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K+ EA+ + IK+ P++
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ QAG D A + F +M G P +I+++ LL + +K ++F E +K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYLQKS 494
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++++ C +G + +L + KGV+ + YTT+++ ++G EEA
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPD--TIS 274
+ L+ EM++ G + YN I GD ELI EMR G D TIS
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D A++L EM + V + +L+ + K + L M+ + D+ +YN+
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 245 ITNTYGGDPERLKEL--IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I N + + L + +M G +PD ++ + L+ YC + + EA + + +
Sbjct: 122 I-NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
PN TF T I+ L +A + V PD T +V GL K+ I A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 363 GVIRTIKK 370
+++ ++K
Sbjct: 241 SLLKKMEK 248
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 162/374 (43%), Gaps = 42/374 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYL 100
+ LD+ S + + +P Y ++ + L+K F + LI E K K++ Y
Sbjct: 251 QQGLDLLSEMQRRGCAPNDVTY--NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTY- 307
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD---------- 149
LI Y GM A+ ++M G +V ++N+ ++ C R+ D
Sbjct: 308 NPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLA 367
Query: 150 ------------------------KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
K +LFDE+ Y L P ++Y LL C G +
Sbjct: 368 NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY-LFPTIVTYNTLLDGLCRQGELE 426
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A +L EM N+G+ VTYT ++N K G+ A+ + EM +G++LD AY RI
Sbjct: 427 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 486
Query: 246 TNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
GD R L +EM G PD I YN ++ CK ++EA ++ + + +G
Sbjct: 487 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVI 546
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ + I+ +G K ++F E + P T +L+ G K +++ A
Sbjct: 547 PDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIY 606
Query: 365 IRTIKKK-FPPNVL 377
+++K PNV+
Sbjct: 607 FSEMQEKGILPNVI 620
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + M + + FD+M + V + N +L L K ++ + ++
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM-GEF 228
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++Y LL S+C G + L+LL+EM+ +G VTY ++N L K+G E+A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L EM K G+ + YN I + G L +EM G P +YN +
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M +A + + N P+ ++ T IY C GN KA+ +F E ++ P
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
T L++GL ++ +++ A+ + + I + P+++
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 445
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD I Y +++ C G+ ++A ELL +M + GV VTYT++++ + G + +
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ EM KG+ V Y V I G G ER EM++ G+ P+ I+YN L+ CK
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCK 631
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
MD+A + + E G PN ++ I C GN+ +A ++K+ + PD T
Sbjct: 632 VRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691
Query: 345 VKLLVEGLVKKKKIKEAK 362
L++ L K K++ +
Sbjct: 692 HSALLKQLGKDCKLQAVR 709
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 150/366 (40%), Gaps = 49/366 (13%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRL-AKSKRFSDIETL-----------------I 85
+ + S S H A P S + QD+ + + K FS+ L +
Sbjct: 29 SFSFHDSTSNHSAPPFSETHFQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDLFVRVL 88
Query: 86 ESHKNDPKIT---------------QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
S + P++ E C ++ Q + A +++ R
Sbjct: 89 SSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHR 148
Query: 131 --------------SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
SV + L++ ++ + ++ +FD++ K LSPD + +L+
Sbjct: 149 IVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKS-RLSPDVKNCNRILR 207
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
D KA+E+ M G++ T VTY T+L+ K G ++ L SEM+++G
Sbjct: 208 ILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAP 267
Query: 237 DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ YNV I + G+ E+ K LI EM GLK +YN L+ Y M+ EA +
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQ 327
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
E + G SP T+ ++IY LC G A + + + + +PD + L+ G +
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 356 KKIKEA 361
+ +A
Sbjct: 388 GNLMKA 393
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G + A +M G +++ +++ A RL I ++ + K L+P +
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSK--GLTPSVV 585
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+Y +L+ H G ++A +EM+ KG+ +TY +++N L K ++A ++EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 230 EKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+KG+ + +Y + I N G+ + L +M D G++PD+ +++ L+
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A F +M E G +VI++N+L+ + R D+ F E+ +K
Sbjct: 590 LIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK- 648
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+K SY +L+ +C+ G+ +AL L +M ++GV+ + T++ +L L K +
Sbjct: 649 GIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAV 708
Query: 223 ERLWSEMEKK 232
+L S ++ +
Sbjct: 709 RQLESLLDSE 718
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ V L K + L++ +D I ++I ++ + G F +M
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G SV+++ L+ ++ I F E+ +K + P+ I+Y L+ C D
Sbjct: 578 KGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK-GILPNVITYNSLINGLCKVRRMD 636
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+A EM KG+ +YT ++N GN +EA L+ +M +GV D
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 152/330 (46%), Gaps = 39/330 (11%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L K K+F + +L+E+ + ++++ + ++R Y +A A+ TF++M G
Sbjct: 161 IEALGKIKQFRLVWSLVEAMRCRSCLSKDTFKI-IVRRYARARKVKEAVETFEKMSSFGL 219
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKK--------------------------- 161
+ +N L+ ++S+ K +F E+ +K
Sbjct: 220 KTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEKDLLMLK 279
Query: 162 --------YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ PD ++YG+L+ + C SG D+A+++ +EME G + Y ++N L
Sbjct: 280 AVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGL 339
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPD 271
+EA + + ++ G ++V N + Y E +++DEMR +G+ P+
Sbjct: 340 GSMERLDEALKYFQLSKESGFPMEVPTCNA-VIGAYCRALEFHHAFKMVDEMRKSGIGPN 398
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T +Y+ ++ K+E ++EA +++ +E +GC P T+ + C + D A KV+K
Sbjct: 399 TRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWK 458
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ +P + L+ GL +++EA
Sbjct: 459 QMKEKGVLPCMHMFSALINGLCFDNRLEEA 488
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 130/259 (50%), Gaps = 11/259 (4%)
Query: 94 ITQEPYL-CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+T P L ++++ AG+ A + + + G S F+ L+ A + + + V
Sbjct: 116 VTVSPQLVAEVLKNLSNAGILALAFFRWAERQQ-GFRYSAEGFHNLIEALGKIKQFRLVW 174
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
L + + + LS D ++ ++++ + + +A+E +M + G++ Y +++
Sbjct: 175 SLVEAMRCRSCLSKD--TFKIIVRRYARARKVKEAVETFEKMSSFGLKTDLSDYNWLIDI 232
Query: 213 LYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLK 269
L K ++A ++ EM++KG + D+ Y V + +G + + LK + EM DAG+K
Sbjct: 233 LSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTV-LMEGWGHEKDLLMLKAVYQEMLDAGIK 291
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PD ++Y L++ +CK+ DEA KV+ +EE+GC P+ + I L D+A K
Sbjct: 292 PDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKY 351
Query: 330 F---KESVMVHKIPDFNTV 345
F KES ++P N V
Sbjct: 352 FQLSKESGFPMEVPTCNAV 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 84/193 (43%), Gaps = 3/193 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + + P Y + + L +R + + K + P
Sbjct: 311 DEAIKVFHEMEESGCMPSPHVYC--MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCN 368
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I +Y +A F HA + D+M + G + +++ +L +S ++ LF + +
Sbjct: 369 AVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERD 428
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +Y +++ C + D AL++ +M+ KGV ++ ++N L EE
Sbjct: 429 -GCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEE 487
Query: 222 AERLWSEMEKKGV 234
A + EM KG+
Sbjct: 488 ACVYFQEMLDKGI 500
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 156/333 (46%), Gaps = 7/333 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KALD++ + + SP Y + ++ L K+ R + + D +L
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTE--LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY-DKVPILFDEIPK 160
NL+ G+ G + F +M +V+S+N ++ A S+ + +V FD++ K
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM-K 401
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++SP + +Y +L+ +C + +KAL LL EM+ KG Y +++N L K E
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
A+ L+ E+++ ++ Y V I + +G G +L +EM++ G PD +YN L
Sbjct: 462 AADELFKELKENFGNVSSRVYAVMIKH-FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M+ K M++EA + +EENGC + + + +G +A ++F+
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L+ +EA ++R +K K
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSK-RFSDIETLIESHKNDPKITQEPYLCNLI 104
+++S + +P Y + ++ L +SK S++ + + K D E LI
Sbjct: 359 NVFSEMGMWRCTPTVVSY--NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
Y + + A+ ++MDE G P ++ +L+ A +++ Y+ LF E+ + +
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGN 476
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
++ Y +++K G +A++L NEM+N+G Y +++ + K G EA
Sbjct: 477 VSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L +ME+ G D+ ++N+ I N + G P R E+ + ++ +G+KPD ++YN L+ C+
Sbjct: 536 LLRKMEENGCRADINSHNI-ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
M +EA ++ +++ G +A T+ + L GN D
Sbjct: 595 AHAGMFEEAARMMREMKDKGFEYDAITYSSI---LDAVGNVD 633
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 20/318 (6%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEP-YLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R L +++ + ++ I+ + ++ P L L+++ G+A M A+ F Q
Sbjct: 133 IRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK 192
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++N+++ + ++KV ++ E+ + + PD I+Y L+ S+ G +D A
Sbjct: 193 CKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSA 252
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L +EM++ ++ T YTT+L +K G E+A L+ EM++ G V Y I
Sbjct: 253 IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG 312
Query: 248 TYGGDPERLKELI----DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G R+ E D +RD GL PD + N LM K ++E V+ + C
Sbjct: 313 L--GKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI------PDFNTVKLLVEGLVKKKK 357
+P ++ T I L F+ V + S K+ P T +L++G K +
Sbjct: 370 TPTVVSYNTVIKAL-----FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 358 IKEAKGVIRTIKKK-FPP 374
+++A ++ + +K FPP
Sbjct: 425 VEKALLLLEEMDEKGFPP 442
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL + + + P + Y + L K+KR+ + L + K +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCS--LINALGKAKRYEAADELFKELKENFGNVSSRVYA 483
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ +G+ G A+ F++M G+ V ++NAL+ ++ + ++ L ++ +
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
D S+ ++L +G +A+E+ +++ G++ VTY T+L C G EE
Sbjct: 544 -GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A R+ EM+ KG + D Y+
Sbjct: 603 AARMMREMKDKGFEYDAITYS 623
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++ L+ +RLY ++ E+ + +S L+K+ + KAL + +
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYG-G 251
+ + + T+ TY +V+ L ++G E+ +++EM +G D Y+ I++ G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ L DEM+D ++P Y L+ Y K +++A ++E ++ GCSP T+
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
I L +G D+AY +K+ + PD + L+ L K +++E V
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ A +++ + +++ + S YA + ++ K + S+ L KN
Sbjct: 461 EAADELFKELKENFGNVSSRVYA--VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ +AGM + A +M+E G + S N +L R+ + + +F+ I K
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-KH 577
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ PD ++Y LL +G ++A ++ EM++KG E +TY+++L+ +
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G A+R M + +VI++N ++ + + R + LF E+ K
Sbjct: 261 LMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK- 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ + C+ LLNEM N + V ++TV++ L K+G A
Sbjct: 320 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 379
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M K+GV+ DV Y + + + + ++ D M G P+ SYN L+
Sbjct: 380 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 439
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ + MD+A + E + G + T+ T I+ LC G A +F E V +IPD
Sbjct: 440 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 499
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++L++ L K + EA +++ I+
Sbjct: 500 LVTYRILLDYLCKNHHLAEAMVLLKAIE 527
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD M G +V S+N L+ + + DK L +++ + L D ++Y
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADTVTYN 469
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C G A+ L +EM G VTY +L+ L K + EA L +E
Sbjct: 470 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 529
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+D D+ YN+ I G+ E ++L + GL+PD +YN ++ CK ++DEA
Sbjct: 530 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 589
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K++ ++ENGCS + + T I S A ++ +E + D +T L+VE
Sbjct: 590 NKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEM 649
Query: 352 L 352
L
Sbjct: 650 L 650
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 3/267 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A+ +F++M + P S + F LL + + + Y V L ++ + + PD +
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM-DSFGIPPDVYTLN 189
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ S C A +L ++ G + T+ T++ L +G EA L+ + +
Sbjct: 190 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249
Query: 233 GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G DV Y + G+ L+ M +P+ I+YN ++ CK+ + EA
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 309
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++ + G SP+ T+ + I+ LC + + E V +P+ +V+
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369
Query: 352 LVKKKKIKEAKGVI-RTIKKKFPPNVL 377
L K+ I A V+ IK+ P+V+
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEPDVV 396
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 39/325 (12%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +++S + SP + + + L + + TL+ N +
Sbjct: 308 EAFNLFSEMITKGISP--DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 365
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ + + GM A D M + G V+++ AL+ C RS + + V + FD + K
Sbjct: 366 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV-FDTMVHK 424
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ SY +L+ +C DKA+ LL +M +G+ TVTY T+++ L G +
Sbjct: 425 -GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A L+ E M +G PD ++Y L+
Sbjct: 484 AIALFHE----------------------------------MVASGQIPDLVTYRILLDY 509
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CKN + EA + + +E + + + I +C +G + A +F PD
Sbjct: 510 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 569
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIR 366
T +++ GL K+ + EA + R
Sbjct: 570 VRTYNIMIHGLCKRGLLDEANKLFR 594
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +M G + ++N+L+ A + V L +E+ + P+ + + ++
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTVV 367
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G A ++++ M +GVE VTYT +++ + +EA +++ M KG
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427
Query: 236 LDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+V +YN+ I N Y +R+ + L+++M GL DT++YN L+ C + A
Sbjct: 428 PNVRSYNILI-NGYC-QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 485
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ + +G P+ T+R + +LC + + +A + K + D + ++G+
Sbjct: 486 ALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGM 545
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNV 376
+ +++ A+ + + K P+V
Sbjct: 546 CRAGELEAARDLFSNLSSKGLQPDV 570
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 7/295 (2%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
F D+ L S + + + + +I +YG+ GM D M F QM E G ++
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442
Query: 138 LLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
++ A +R RL D + I L P+ I Y L++ C G+ KA EL++EM +
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMI--AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMS 500
Query: 197 KGV-EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDP 253
+G+ V + +++N L K+G EA ++ + G DV +N + + YG G
Sbjct: 501 RGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN-SLIDGYGLVGKI 559
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
E+ ++D M AG++PD +SYN L+ YC+N +D+ ++ + G P T+
Sbjct: 560 EKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGII 619
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
++ L G A K+ E + D +T +++ GL + EA + + +
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKL 674
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 154/349 (44%), Gaps = 12/349 (3%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH-KNDPK 93
L E + KA +++ + + P Y + L K++ E ++ N +
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTS--IIDALCKARAMDKAELVLRQMISNGFQ 294
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+ Y C +I Y +G + F +M G ++++ N+ + + + +
Sbjct: 295 PNKVTYNC-MIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
FD + K + P+ ++Y +LL + G L L N ME G+ + V++
Sbjct: 354 FFDSMAAKGH-KPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKP 270
K+G +E ++++M+++GV D Y + I RL + +D +M GLKP
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAF--SRMGRLADAMDKFNQMIAMGLKP 470
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS-PNATTFRTWIYHLCGSGNFDKAYKV 329
+ I Y+ L+ +C + + +AK++ + G PN F + I LC G +A+ +
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDI 530
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
F + + + PD T L++G KI++A GV+ I P+V+
Sbjct: 531 FDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVV 579
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 6/252 (2%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+V ++N L+ C R+R LF K L D I +LLK + SD + L
Sbjct: 118 TVCTYNILMDCCCRTRRPTVGFALFGRFLKT-GLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 191 L-NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK--GVDLDVAAYNVRITN 247
L + M GVE T++Y TV+ L + ++ A L M KK G +V YN I
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ G+ + L EM G+ PD ++Y ++ CK MD+A+ V + NG PN
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ I+ SG + + +F+E +P+ T + L K K KEA
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 367 TIKKK-FPPNVL 377
++ K PN++
Sbjct: 357 SMAAKGHKPNLV 368
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK--GVEVTTVTY 206
D V +L +P+ + PD ISY ++K+ C+ S +AL+LL+ M K G VTY
Sbjct: 172 DVVNLLLHRMPE-LGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTY 230
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRD 265
TV++ L+++G +A L+ EM ++GV DV Y I EL+ +M
Sbjct: 231 NTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS 290
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G +P+ ++YN ++ Y + E ++ + G PN T +++ LC G +
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEG 351
A + F P+ T +L+ G
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHG 376
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G A F +M + G V+++ +++ A ++R DK ++ ++
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN- 291
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+K++Y ++ + SG + + EM ++G+ VT + ++ L K G ++EA
Sbjct: 292 GFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEA 351
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ M KG ++ Y+V + T G + L L + M G+ D +N ++
Sbjct: 352 AEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLN-LFNSMEGNGIVADQRVFNIVID 410
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K MMDE ++ ++E G P+A T+ I G A F + + + P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFP-PNVL 377
+ L++G + +AK ++ + + P PN++
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIV 509
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+ ++I S + G A FD + +G VI+FN+L+ +K + D +
Sbjct: 510 FFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM 569
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ PD +SY L+ +C +G D L L EM +KGV+ TT+TY +L+ L+ G
Sbjct: 570 ISA-GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 219 AEEAERLWSEMEKKGVDLDVAA------------------------------YNVRITNT 248
A+++ EM + G +D++ +N+ I NT
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688
Query: 249 YGG------DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
E KEL D + GL P+ +Y ++ K ++EA ++ +E++G
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748
Query: 303 CSPNATTFRTWIYHLCGSGNFDKA 326
C+P++ I L G KA
Sbjct: 749 CAPSSRLLNYIIRVLLEKGEIVKA 772
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA-ER 224
P +Y +L+ C + L G+++ + + +L CLY +++
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 225 LWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEM--RDAGLKPDTISYNFLMTC 281
L M + GV+ D +YN + T +R +L+ M + G P+ ++YN ++
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + +A ++ + + G P+ T+ + I LC + DKA V ++ + P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T ++ G + KE G+ R + + PN++
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIV 333
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 41/300 (13%)
Query: 118 RTFDQMDEL---GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
R D M+E+ G P +V++FN L+ R+ L+++V + ++ + +PD Y +
Sbjct: 243 RVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM-VDHGCTPDIRMYATV 301
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L C G + A E+L+ M + G++ V Y TVL L E+AE L +EM
Sbjct: 302 LDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDC 361
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
LD +N+ + G R+ EL+++M + G PD I+Y ++ +CK ++DEA
Sbjct: 362 PLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVM 421
Query: 294 VYEGLE-----------------------------------ENGCSPNATTFRTWIYHLC 318
+ + + E GCSPN TF T I LC
Sbjct: 422 LLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLC 481
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
G ++A ++ K+ ++ PD + +++GL K K EA ++ + K PN +
Sbjct: 482 KKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 541
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 145/307 (47%), Gaps = 6/307 (1%)
Query: 68 TVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDE 125
++ L ++R+ E L+ E ND + + N L+ + Q G+ + +QM E
Sbjct: 336 VLKGLCSAERWEQAEELLAEMFDNDCPLDDVTF--NILVDFFCQNGLVYRVIELLEQMLE 393
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G VI++ ++ + L D+ +L + P+ ISY ++LK C +
Sbjct: 394 HGCVPDVITYTTVINGFCKEGLIDEAVMLLKSM-AACGCRPNTISYTIVLKGLCSAERWV 452
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A +L+++M +G VT+ TV+N L K+G E+A L +M G D+ +Y+ I
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512
Query: 246 TNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G + EL++ M + G+ P+TI Y+ + + K ++ ++++ +++
Sbjct: 513 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIR 572
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+A + I LC G D+A + V +P+ +T +L+ GL + +KEA+ +
Sbjct: 573 SDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEM 632
Query: 365 IRTIKKK 371
+ + K
Sbjct: 633 LTELCSK 639
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 19/242 (7%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA---EEA 222
P+ +Y ++++ C G AL +L+EM +G Y +L +G A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172
Query: 223 ERLWSEMEKKGVDLDVAAYNV---RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
R+ ++ +G LDV N+ + + G E L+ L D G PD +SYN ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C + + + E + GC PN TF T I +LC +G F++ ++V + V
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL------------RAWKKVEEE 386
PD +++G+ K+ ++ A ++ R PNV+ W++ EE
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352
Query: 387 LG 388
L
Sbjct: 353 LA 354
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 38/300 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLY------------D 149
LI + + G D A R +MDE+G +V+++N LL C R++L D
Sbjct: 214 LIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKAD 273
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
KV FDE+ +K + PD S+ +LL + + ++ L ME G+ T TYT+V
Sbjct: 274 KV---FDEMRQK-GIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSV 329
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGL 268
L CL G ++AE L +M + GV + A YN G DPE +L ++R L
Sbjct: 330 LKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENL 389
Query: 269 -KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
P +YN L+ + K + +++ L +G P+ ++ ++ LC + KA
Sbjct: 390 CDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKAC 449
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
+ F E + +P T ++L GL++ N+LR W++++++L
Sbjct: 450 QFFVEMIEKGLLPQKATFEMLYAGLIQS-------------------NMLRTWRRLKKKL 490
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + +AG+ A+R D+M G V+++N LL C RL D +L +E+ ++
Sbjct: 22 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL-NEMRER 80
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++ L+ +C G DKAL+L + M N+ + VTY T+++ + +QG+ ++
Sbjct: 81 -GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 139
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A LW +M + + + Y++ I ++ G E +DEM + G+ P+ ++YN ++
Sbjct: 140 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 199
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK-- 338
YC++ + + +K + + N SP+ T+ T I+ G DK + FK M+ K
Sbjct: 200 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH---GYIKEDKMHDAFKLLNMMEKEK 256
Query: 339 -IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T +L+ G ++EA + + K
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 290
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 8/274 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGT 128
L K +R D E L+ + + P LC LI Y G D A++ FD M
Sbjct: 61 LCKERRLLDAEGLLNEMR---ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 117
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++++N L+ R DK L+D++ + + P+ ++Y +L+ SHC+ G + A
Sbjct: 118 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
L+EM NKG+ +TY +++ + GN + ++ +M V D+ YN I
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 249 YGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
D +L++ M ++PD ++YN L+ + + + EA ++E + G P+
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
T+ + I +GN +A+++ E + PD
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 39/254 (15%)
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ L PD + Y +++ C +G AL + +EM G VTY T+LN L K+ +
Sbjct: 10 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 69
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE L +EM ++GV D+ + I G ++ +L D M + L+PD ++YN L+
Sbjct: 70 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 129
Query: 281 CYCKNEMMDEAKKVYEGLE-----------------------------------ENGCSP 305
C+ +D+A +++ + G P
Sbjct: 130 GMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 189
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGV 364
N T+ + I C SGN K K F + +MV+K+ PD T L+ G +K+ K+ +A +
Sbjct: 190 NIMTYNSIIKGYCRSGNVSKGQK-FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKL 248
Query: 365 IRTI-KKKFPPNVL 377
+ + K+K P+V+
Sbjct: 249 LNMMEKEKVQPDVV 262
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L EM G+ V YT V+ + G +A R+ EM G DV YN + G
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLN---G 60
Query: 251 GDPER----LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
ER + L++EMR+ G+ PD ++ L+ YC +D+A ++++ + P+
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI- 365
T+ T I +C G+ DKA ++ + P+ T +L++ +K ++++A G +
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180
Query: 366 RTIKKKFPPNVL 377
I K PN++
Sbjct: 181 EMINKGILPNIM 192
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 2/272 (0%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L +L+ + Q F A+ D MD G +V+ +N ++ ++R + +F +
Sbjct: 152 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
KK + D ++Y L+ +SG A LL +M + ++ + +T +++ K+GN
Sbjct: 212 KK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA L+ EM ++ V +V YN I G K + D M G PD ++YN L
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+T +CK++ +++ K++ + G +A T+ T I+ C +G + A KVF V
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T +L++ L KI++A ++ ++K
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G + A R M + +VI F AL+ + + L+ E+ ++
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR- 283
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ P+ +Y L+ C G A + + M +KG VTY T++ K E+
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ EM +G+ D YN I G +++ + M D G+ PD ++YN L+ C
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C N +++A + E L+++ + T+ I LC + +A+ +F+ PD
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
++ GL +K +EA + R +K+ F P+
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G A FD M G V+++N L+ +S+ + LF E+ +
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D +Y L+ +C +G + A ++ N M + GV VTY +L+CL G E+
Sbjct: 354 -GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A + +++K +D+D+ YN+ I D +LKE L + G+KPD I+Y +
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTD--KLKEAWCLFRSLTRKGVKPDAIAYITM 470
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPN 306
++ C+ + EA K+ ++E+G P+
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 105/250 (42%), Gaps = 2/250 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD + + +M+ LG + SF L+ R L ++ K P ++ G
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKM-MKLGFRPSIVTLG 153
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL C +A+ L++ M+ G V Y TV+N L K + A ++ MEKK
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G+ D YN I+ + G L+ +M + P+ I + L+ + K + EA
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ +Y+ + PN T+ + I C G A +F V PD T L+ G
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 352 LVKKKKIKEA 361
K K++++
Sbjct: 334 FCKSKRVEDG 343
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 6/197 (3%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D + L ++MEN G+ ++T +++C + A L +M K G +
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 245 ITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G+ R +E L+D M G P+ + YN ++ CKN ++ A +V+ +E+
Sbjct: 156 LNGFCQGN--RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G +A T+ T I L SG + A ++ ++ V P+ L++ VK+ + EA
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 362 KGVIR-TIKKKFPPNVL 377
+ + + I++ PNV
Sbjct: 274 RNLYKEMIRRSVVPNVF 290
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 8/312 (2%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R L +++ ++ +I+ +P P L ++IR G A M A+ F Q+
Sbjct: 126 IRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRK 185
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++N+++ Y+KV L++E+ + + PD ++Y L+ + C G D A
Sbjct: 186 CQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSA 245
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ LLNEM++ G++ T YT ++ +K N A L+ EM + DV Y I
Sbjct: 246 IRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRG 305
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G R E EMR G +PDT+ N ++ K +D+A K++E + C
Sbjct: 306 L--GKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCI 363
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKG 363
P+ T+ T I L S + + E + I P T +L++G K + ++A
Sbjct: 364 PSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMM 423
Query: 364 VIRTIKKK-FPP 374
++ + +K FPP
Sbjct: 424 LLEEMDEKGFPP 435
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 14/310 (4%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL ++ + Y P Y + +R L K+ RF + + + + N+
Sbjct: 280 ALGLFEEMRHQYCRPDVFTYTE--LIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNM 337
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC--TRSRLYDKVPILFDEIPKK 161
I G+AG D A++ F++M L SV+++N ++ A ++SR+ ++ F+ + K
Sbjct: 338 INFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRI-SEISSWFERM-KG 395
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SP +Y +L+ C + ++KA+ LL EM+ KG Y ++++ L K +
Sbjct: 396 SGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDI 455
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ E+++ Y V I + G RL + L DEM G P+ +YN L
Sbjct: 456 AHELFQELKENCGSSSARVYAVMIKHL--GKAGRLDDAVNLFDEMNKLGCTPNVYAYNAL 513
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M+ + M+DEA ++E+GC P+ ++ + L +G +A ++ K+S +
Sbjct: 514 MSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAI 573
Query: 336 VHKIPDFNTV 345
+NTV
Sbjct: 574 KPDAVSYNTV 583
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA+ + + + P + Y + L K+KR+ L + K + +
Sbjct: 419 EKAMMLLEEMDEKGFPPCPAAYCS--LIDALGKAKRYDIAHELFQELKENCGSSSARVYA 476
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ G+AG D A+ FD+M++LG +V ++NAL+ R+ + D+ + ++
Sbjct: 477 VMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM-QE 535
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD SY ++L +G +A+E+L+ M+ ++ V+Y TVL + G EE
Sbjct: 536 HGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEE 595
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A +L EM G + D+ Y+
Sbjct: 596 AAKLMKEMNVLGFEYDLITYS 616
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 38/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + G D A+R ++M + G + + L+ + LF+E+ +Y
Sbjct: 232 LISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQY 291
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y L++ +G D+A +EM +G TV ++N L K G ++A
Sbjct: 292 -CRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDA 350
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-------------------GGDP---------- 253
+L+ EM V YN I + G P
Sbjct: 351 VKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILID 410
Query: 254 --------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E+ L++EM + G P +Y L+ K + D A ++++ L+EN S
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSS 470
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A + I HL +G D A +F E + P+ L+ GL + + EA +
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTM 530
Query: 366 RTIKK 370
R +++
Sbjct: 531 RRMQE 535
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 4/265 (1%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+ G ++ A++ M +G+ +ISFN+ + AC R + ++ L E+P L+P+
Sbjct: 404 KGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTA-GLTPNV 462
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
I+Y +++ S +A+ L EM +G+ VTY ++++ K E A +L +
Sbjct: 463 ITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTG 522
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M +GV DV +YN I G+ L +L+ M G KPD ISYN +T K+
Sbjct: 523 MPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGR 582
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG-NFDKAYKVFKESVMVHKIPDFNTVK 346
EA + + + G +PN ++ I H CG G +D A ++ KE P+ T
Sbjct: 583 WREALGLLKDMATVGLTPNTVSYGAAI-HACGKGEQWDVAVRILKEMQTHGATPNLITYS 641
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKK 371
++ K+ + KEA ++ ++++
Sbjct: 642 AAIDACAKQGRWKEAVDLLTDLRRQ 666
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 153/339 (45%), Gaps = 7/339 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
++A+D+ V + P + Y + + AK R+ + ++ L + ND Y
Sbjct: 234 EEAMDLLEEVIEQGFPPSTRTY--NPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISY- 290
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++I + G+ + AM +QM G +VIS+N+ + AC + + + L E+
Sbjct: 291 SSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREM-T 349
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L P ISY + +G +ALELL EM +G+ T++Y + L+ K G E
Sbjct: 350 TVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWE 409
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L M G D D+ ++N I G E EL+ EM AGL P+ I+YN +
Sbjct: 410 KAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAI 469
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
++ EA ++ + G SPN T+ + I ++ A ++
Sbjct: 470 EACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVA 529
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNVL 377
PD + +E K ++ + A +++ + + P P+++
Sbjct: 530 PDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDII 568
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 129/278 (46%), Gaps = 7/278 (2%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I + G + AM +QM G P ++I++N+ + AC + R +++ L +E+ ++
Sbjct: 189 IAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQ-G 247
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
P +Y ++ + G +A++LL +M + ++Y++V+ + +EA
Sbjct: 248 FPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAM 307
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMT 280
L +M +GV +V +YN I GD R KE +D EM GL P ISYN
Sbjct: 308 DLLEQMRTQGVSPNVISYNSAIDACAKGD--RWKEALDLLREMTTVGLVPTVISYNSATA 365
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
N EA ++ + + G +PN ++ + + G ++KA K+ + V P
Sbjct: 366 ACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDP 425
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
D + ++ + ++ + A ++R + PNV+
Sbjct: 426 DIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVI 463
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I + G+ ++ A+ +M G +VI++N+ + AC RS + + LF E+P +
Sbjct: 434 IDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTR-G 492
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
LSP+ ++Y ++ + + A++LL M +GV ++Y + + K E A
Sbjct: 493 LSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELAL 552
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMT 280
+L M +G D+ +YN +T R +E L+ +M GL P+T+SY +
Sbjct: 553 QLLKGMPTRGPKPDIISYNSAVTAC--AKSGRWREALGLLKDMATVGLTPNTVSYGAAIH 610
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K E D A ++ + ++ +G +PN T+ I G + +A + + P
Sbjct: 611 ACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTP 670
Query: 341 DFNT 344
D T
Sbjct: 671 DAQT 674
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 7/241 (2%)
Query: 77 RFSDIETLIESHKNDPKITQEPYLC---NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVI 133
R ET +E + P P + + I + G++ + AM F +M G +V+
Sbjct: 439 RGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVV 498
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS-DKALELLN 192
++N+++ AC + ++ L +P + ++PD ISY +++ C G + AL+LL
Sbjct: 499 TYNSMIDACAKGEQWELAVQLLTGMPAR-GVAPDVISYNSAIEA-CGKGEQWELALQLLK 556
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD 252
M +G + ++Y + + K G EA L +M G+ + +Y I G+
Sbjct: 557 GMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGE 616
Query: 253 PERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ ++ EM+ G P+ I+Y+ + K EA + L G +P+A T+
Sbjct: 617 QWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYL 676
Query: 312 T 312
T
Sbjct: 677 T 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 133/298 (44%), Gaps = 9/298 (3%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
+++ D ++ E ++ G+ G + + R+ G P+S++ ++L +
Sbjct: 30 LDAGAVDAGVSGEATRLGVLSRRGE-GSLEPSTRSRGAASRGGKPKSLVKLKSILLE-AK 87
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
R + DE K S D SY + + + + A+ LL EM +GV V
Sbjct: 88 GRDWRTALAALDEF-KISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVV 146
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEM--EKKGVDLDVAAYNVRITN-TYGGDPERLKELID 261
TY + + K G +EA L ++M +G+ DV YN I + GG + +L++
Sbjct: 147 TYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLE 206
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M G+ P+ I+YN + K +EA + E + E G P+ T+ I G
Sbjct: 207 QMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGG 266
Query: 322 NFDKAYKVFKESVMVHKIP-DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ +A + + ++ + IP D + ++ + ++ KEA ++ ++ + PNV+
Sbjct: 267 RWLEAMDLLGQ-MLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVI 323
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 4/231 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKKYNLSPDKISY 171
+ A+R +M G V+++N+ + AC++ R + + +L + ++PD ++Y
Sbjct: 126 WATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTY 185
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+ + + G +A++LL +M +GV +TY + + K EEA L E+ +
Sbjct: 186 NSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIE 245
Query: 232 KGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+G YN I GG +L+ +M + D ISY+ ++ + E
Sbjct: 246 QGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKE 305
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGN-FDKAYKVFKESVMVHKIP 340
A + E + G SPN ++ + I C G+ + +A + +E V +P
Sbjct: 306 AMDLLEQMRTQGVSPNVISYNSAI-DACAKGDRWKEALDLLREMTTVGLVP 355
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
+ + ++G + A+ M +G + +S+ A + AC + +D + E+ + +
Sbjct: 574 VTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEM-QTHG 632
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
+P+ I+Y + + G +A++LL ++ +G+ TY TV++ +
Sbjct: 633 ATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAFQR 684
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ YG+ GM ++ + D+M G ++N L+ C R LY++ + E+ K
Sbjct: 241 ILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEM-KL 299
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPDK++Y LL + S S +A+E+L EME G + VTY ++++ + G E+
Sbjct: 300 AGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLED 359
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L ++M +KG+ DV Y ++ G + ++ +EMR+ G KP+ ++N L+
Sbjct: 360 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 419
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ E KV+E ++ CSP+ T+ T + +G + VFKE +P
Sbjct: 420 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 479
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ +T L+ + +A V + +
Sbjct: 480 ERDTFNTLISSYSRCGSFDQAMAVYKRM 507
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 140/303 (46%), Gaps = 7/303 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K R S +L+ + D ++I ++ G + A+ F +M+E+G +
Sbjct: 175 LGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPT 234
Query: 132 VISFNALLFACTRSRL-YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS-SDKALE 189
+I++N +L + + ++K+ L D + K ++PD +Y L+ S C G+ ++A
Sbjct: 235 LITYNVILNVYGKMGMPWNKMVGLVDRM-KSAGIAPDSYTYNTLI-SCCRRGNLYEEAAG 292
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+L EM+ G VTY +L+ K ++EA + EME G + YN I+ Y
Sbjct: 293 VLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLIS-AY 351
Query: 250 GGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
D E EL ++M + G+KPD +Y L++ + K A +++E + GC PN
Sbjct: 352 ARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNI 411
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TF I G F + KVF++ PD T L+ + E GV +
Sbjct: 412 CTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKE 471
Query: 368 IKK 370
+K+
Sbjct: 472 MKR 474
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 5/300 (1%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K + + LI SY + G FD AM + +M E G + S+NA+
Sbjct: 463 SEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAV 522
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R L+ + + E+ K P++++Y LL ++ + ++ L E+ +
Sbjct: 523 LAALARGGLWKQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI 581
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERL 256
+E V T++ K E ER + E+ ++G D+ N ++ YG +
Sbjct: 582 IEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVS-IYGRRQMVAKA 640
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
E++D M+ G P +YN LM Y ++ + ++++ + G P+ ++ T IY
Sbjct: 641 NEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYA 700
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
C +G A +V E PD T + EA V+ IK PN
Sbjct: 701 YCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 760
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 147/322 (45%), Gaps = 43/322 (13%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+P +C LI+ +G G F M+ F+ + ++++N LL ++ + +V
Sbjct: 408 KPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSG 467
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F E+ K+ P++ ++ L+ S+ GS D+A+ + M GV +Y VL L
Sbjct: 468 VFKEM-KRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAAL 526
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDE--------- 262
+ G +++E++ +EM+ + Y + + Y G + ER+ L +E
Sbjct: 527 ARGGLWKQSEKVLAEMKDGRCKPNELTY-CSLLHAYANGKEIERMCALAEEIYSGIIEPR 585
Query: 263 --------------------------MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+R G PD + N +++ Y + +M+ +A ++ +
Sbjct: 586 AVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILD 645
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
++ G +P+ TT+ + +Y S NF+++ ++ +E + PD + ++ +
Sbjct: 646 CMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNG 705
Query: 357 KIKEAKGVIRTIKKKFP-PNVL 377
++++A V+ +++ P P+++
Sbjct: 706 RMRDASRVLSEMRESGPAPDII 727
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA-EEAERL 225
D +Y ++ + +G +A+ + +ME G + T +TY +LN K G + L
Sbjct: 199 DVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGL 258
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
M+ G+ D YN I+ G+ E ++ EM+ AG PD ++YN L+ Y K
Sbjct: 259 VDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGK 318
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ EA +V + +E NGC P+ T+ + I G + A ++ + V PD T
Sbjct: 319 SRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFT 378
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
L+ G K K K A + ++ + PN+
Sbjct: 379 YTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNI 411
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 154 LFDEIPKKYNLSPDKISY-------GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
LF++ P + + S + +S GL CD+ + E + + + +
Sbjct: 111 LFEQQPGESDFSVESLSLDVLGIVKGLGFYKKCDTAL--RVFEWVRNRKESELLLNGSII 168
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
+++ L K G A L + K G D+DV AY IT T G + +M +
Sbjct: 169 AVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEE 228
Query: 266 AGLKPDTISYNFLMTCYCKNEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN-F 323
G KP I+YN ++ Y K M ++ + + ++ G +P++ T+ T I C GN +
Sbjct: 229 VGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLI-SCCRRGNLY 287
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
++A V KE + PD T L++ K ++ KEA V++ ++ PP+++
Sbjct: 288 EEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIV 342
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 142/296 (47%), Gaps = 4/296 (1%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLI-RSYGQAGMFDHAMRT 119
S+ + + V L SK+F I + + P + LI R+Y +A + A+R
Sbjct: 113 SKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRA 172
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F QM + G V + LL+ + + + FD++ + P+ +Y +L++
Sbjct: 173 FHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKV--NVEVMPNAKTYSILMRGWG 230
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
D G S +A +L EM +G V V Y ++L L K GN +EA +L+ EM G+ D
Sbjct: 231 DVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDAC 290
Query: 240 AYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+Y++ I D +++D MR L P+ +YN ++ CK+E +DEA ++ + +
Sbjct: 291 SYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEM 350
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
E G SP+ ++ C +KA ++ + +PD +T ++++ L++
Sbjct: 351 IERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLR 406
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ L+ +++C + A+ ++M + GV+ +L L K+ + ++A+ + ++
Sbjct: 153 FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVN 212
Query: 231 KKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ V + Y++ + +G GD ++L +EMR+ G D ++YN L+ CK +
Sbjct: 213 VE-VMPNAKTYSI-LMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNV 270
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
DEA K++ + NG +P+A ++ +I C + A++V + +P+ T +
Sbjct: 271 DEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI 330
Query: 349 VEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
V+ L K +K+ EA ++ I++ P++
Sbjct: 331 VKKLCKSEKVDEAYQLLDEMIERGVSPDL 359
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 44/272 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
IR+Y + A + D+M +V ++N ++ +S D+ L DE+ ++
Sbjct: 295 FIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIER- 353
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD SY + HCD +KAL L++ ME + TY VL L + G +
Sbjct: 354 GVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFD-- 411
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
R+T+ +GG ER G P +Y ++ +
Sbjct: 412 ---------------------RVTDVWGGMEER-----------GFYPAASTYAVMVHGF 439
Query: 283 CKNE-MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + ++EA K +E + ++G P + T + G G F E + V
Sbjct: 440 CKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLG--------FSEQIDVLAGKM 491
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+ +++ L + ++A G +R+ ++ P
Sbjct: 492 ERSTSCVIQELSSVMRGEKASGRLRSEEQNLP 523
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 159/364 (43%), Gaps = 43/364 (11%)
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSY 107
+ + Y P S +A + + +S RF +I K P + L I S
Sbjct: 137 ILEQYGDPDS--FAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNIL---IGSL 191
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
G D A++ DQ+ E +VI++ L+ A D L DE+ + L PD
Sbjct: 192 CARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSR-GLQPD 250
Query: 168 KISYGLLLKSHCDSGSSDKALE--------------------------------LLNEME 195
+Y ++++ C G D+A E L+++M
Sbjct: 251 MYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMI 310
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPE 254
KG E VTY+ +++ L + G A EA + M++KG++ D Y+ I+ G +
Sbjct: 311 VKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVD 370
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+D+M AG PD ++YN +M CK DEA +++ LEE GC PNA+++ T
Sbjct: 371 LAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMF 430
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFP 373
L SG+ +A + E + PD T L+ L + + EA G++ +++ ++
Sbjct: 431 GALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQ 490
Query: 374 PNVL 377
P V+
Sbjct: 491 PTVI 494
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G ++ R M G ++++++ L+ + C + + V +L + K+ L+PD
Sbjct: 297 GRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVL--RVMKEKGLNPDAY 354
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
Y L+ + C G D A+ +++M + G V Y T++ L K+G A+EA ++ ++
Sbjct: 355 CYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKL 414
Query: 230 EKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
E+ G + ++YN + GD R +I EM G+ PD I+YN L++ C++ M+
Sbjct: 415 EEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMV 474
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
DEA + +E P ++ + LC + A +V V P+ T LL
Sbjct: 475 DEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLL 534
Query: 349 VEGL 352
VEG+
Sbjct: 535 VEGV 538
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 137/311 (44%), Gaps = 37/311 (11%)
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
LC LI+ + + A+R + +++ G P S ++NA++ RS +D + +
Sbjct: 114 LCTKLIKGLFTSKRTEKAVRVMEILEQYGDPDS-FAYNAVISGFCRSDRFDAANRVILRM 172
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K SPD ++Y +L+ S C G D AL++++++ T +TYT ++ G+
Sbjct: 173 -KYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGS 231
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRI------------------TNT------------ 248
++A RL EM +G+ D+ YNV + NT
Sbjct: 232 IDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLK 291
Query: 249 ---YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E + L+ +M G +P+ ++Y+ L++ C++ EA V ++E G +P
Sbjct: 292 GLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNP 351
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A + I C G D A + + +PD ++ L KK + EA +
Sbjct: 352 DAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIF 411
Query: 366 RTIKK-KFPPN 375
+ +++ PPN
Sbjct: 412 KKLEEVGCPPN 422
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 34/137 (24%)
Query: 259 LIDEMRDAGLKPDTI----------------------------------SYNFLMTCYCK 284
+++M G KPD I +YN +++ +C+
Sbjct: 99 FLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGDPDSFAYNAVISGFCR 158
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++ D A +V ++ G SP+ T+ I LC G D A KV + + + P T
Sbjct: 159 SDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVIT 218
Query: 345 VKLLVEGLVKKKKIKEA 361
+L+E + I +A
Sbjct: 219 YTILIEATIIHGSIDDA 235
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
++P KISY +L+ ++C G KA+ +ME +G+E +T+ TV++ + G + AE
Sbjct: 356 VTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAE 415
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
M +KGV V YN + N YG G R E +DEM AG+KP+ ISY L+ C
Sbjct: 416 TWVRRMVEKGVSPTVETYN-SLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINC 474
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ + +A+ V + G SPNA + I C A++ F E +
Sbjct: 475 LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDAT 534
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
T L+ GL + ++K+A+ + ++ K P+V+
Sbjct: 535 LVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVI 571
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 5/272 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI YGQ G F D+MD+ G +VIS+ +L+ C +L D +L D I +
Sbjct: 435 SLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP+ Y +L+++ C A +EM G++ T VTY T++N L + G +
Sbjct: 495 --GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVK 552
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+AE L+ +M KG + DV YN I+ + ++ EL D+M+ G+KP +++ L+
Sbjct: 553 KAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI 612
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ E + K+++ + + P+ + IY GN KA + ++ V
Sbjct: 613 YA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVD 671
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T L+ ++ +++ E K ++ +K K
Sbjct: 672 CDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 148/354 (41%), Gaps = 54/354 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQE 97
D+A D+YS++ K P S+R L +R L S+ F +I+S +
Sbjct: 104 DEATDLYSTMRKDGFVP-STRSVNRL-LRTLVDSRHFEKTLAVFADVIDSGTRPDAV--- 158
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDEL-------GTPRSVISFNALLFACTRSRLYDK 150
+YG+A ++ D+ EL G SV ++N +L + R
Sbjct: 159 --------AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKD 210
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
LFDE+ ++ N+ P+ ++Y L+ +C G ++AL M+ + VE VTY ++L
Sbjct: 211 ARKLFDEMIQR-NMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLL 269
Query: 211 NCLYKQGNAEEAERLWSEMEKKG----------------------------VDLDVAAYN 242
N L G ++A + EME G + +D Y
Sbjct: 270 NGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYC 329
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ + G E+ +E++ ++ + G+ P ISYN L+ YC+ + +A E +EE
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
G PN TF T I C +G D A + V P T L+ G +K
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 126/251 (50%), Gaps = 5/251 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R FD+M + G +++++N L+ R+ K LF ++ K +PD I+Y L+
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGK-GCNPDVITYNSLI 577
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ S ++ K LEL ++M+ G++ T T+ ++ K+G ++++ EM + +
Sbjct: 578 SGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEG-VVTMDKMFQEMLQMDLV 636
Query: 236 LDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D YN I +Y D +K L +M D G+ D ++YN L+ Y ++ + E K
Sbjct: 637 PDQFVYNEMIY-SYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKH 695
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + ++ G P T+ I LC +F+ AY ++E V + + + L+ GL
Sbjct: 696 LVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLR 755
Query: 354 KKKKIKEAKGV 364
++ ++EA+ V
Sbjct: 756 EEGMLREAQIV 766
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 128/308 (41%), Gaps = 31/308 (10%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+SS+S+ +A VS + D + + SK + L + + D + + L+R+
Sbjct: 74 FSSLSELHAH-VSKPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTL 132
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+ F+ + F + + GT +++ + A + DK L + K + P
Sbjct: 133 VDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKD-GMGPS 191
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+Y L+L C A +L +EM + + TVTY T+++ K G EEA
Sbjct: 192 VFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKE 251
Query: 228 EMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKP---------------- 270
M+++ V+ ++ YN + G G + +E++ EM +G P
Sbjct: 252 RMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAG 311
Query: 271 ------------DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
D +Y L+ C+ +++A++V L ENG +P+ ++ + C
Sbjct: 312 DDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYC 371
Query: 319 GSGNFDKA 326
G+ KA
Sbjct: 372 QEGDVKKA 379
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SY + G AM QM + G +++N+L+ A R R ++ L D++ K
Sbjct: 645 MIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK- 703
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P +Y +L+K CD + A EM +G+ + +++ L ++G EA
Sbjct: 704 GLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763
Query: 223 ERLWSEMEKKGVD 235
+ + SE+ G++
Sbjct: 764 QIVSSELSIGGLN 776
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNF 277
+EA L+S M K G + N R+ T E+ + ++ D+G +PD ++Y
Sbjct: 104 DEATDLYSTMRKDGFVPSTRSVN-RLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+ + +D+ ++ + + ++G P+ + + LC A K+F E + +
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+P+ T L++G K I+EA G +K++
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ 256
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 148/326 (45%), Gaps = 15/326 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQE 97
D AL Y + ++ A V + + V L KS R SD +E +IE+ +T
Sbjct: 219 DSALVHYRDMQRNCAPSVIT---YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYN 275
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFD 156
LI + + G D A+ F+QM E V ++N L+ C + R D +L +
Sbjct: 276 ----TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQE 331
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ KY P+ I+Y L+ S SG A L M + + + T+ +++ K
Sbjct: 332 MV--KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 389
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISY 275
G + A L+ M +G D+ YN+ I+ + + ++L++ M +AG PD ++Y
Sbjct: 390 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 449
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N +++ CK +DEA +VYE L G + T T I LC S D A K+ +E
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
PD +L+ G K ++ ++
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKS 535
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 37/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A F M + G + ++N ++ R+ D L + + +
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA- 440
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y ++ C + D+A E+ + N G + VT +T+++ L K ++A
Sbjct: 441 GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGD------------------------------ 252
E+L EME+ G DV AY + I D
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 560
Query: 253 ---PERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
R+++ L+ M + G+ PD I Y ++ CK++ DEA ++Y+ +++ GC+P
Sbjct: 561 LCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPT 620
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ + LC D+A + + +PD T + +G K + +A + +
Sbjct: 621 VVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQ 680
Query: 367 TIKKK 371
+K +
Sbjct: 681 AMKSR 685
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
DK FD + K + LL + + +A +L ++TY+T
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA-- 266
++N K + ++A RL EMEK+G+ A YN I D R+ + RD
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGL--CDNGRVDSALVHYRDMQR 230
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
P I+Y L+ CK+ + +A + E + E GC+PN T+ T I C GN D+A
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE-AKGVIRTIKKKFPPNVL 377
+F + + PD T +L++G K+++ ++ AK + +K PN +
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 6/235 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ D A + +M+ G+ V+++ L+ ++ DK F E+ K
Sbjct: 487 LIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK- 545
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P I+Y +++ C S LL M +GV + YT+V++ L K + +EA
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
L+ M++ G V YNV + RL E L++ M G PDT++YN +
Sbjct: 606 YELYKLMKQTGCAPTVVTYNVLVDKL--CKVSRLDEAIHLLEVMESDGCLPDTVTYNSVF 663
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ K+ D+A ++++ ++ GCSP + + L D+A ++++E++
Sbjct: 664 DGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEAL 718
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 4/243 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L KS+R D E L+ + + LI + +A D ++ F +M + G +
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 550
Query: 132 VISFNALLF-ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
VI+++ ++ C +R+ D +L + + ++PD I Y ++ C S S D+A EL
Sbjct: 551 VITYSIVIDKLCKSARVRDGCMLLKTMLER--GVTPDAIVYTSVIDGLCKSDSYDEAYEL 608
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
M+ G T VTY +++ L K +EA L ME G D YN +
Sbjct: 609 YKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWK 668
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ ++ L M+ G P Y+ L+T E MD+A +++E E G +
Sbjct: 669 SAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728
Query: 310 FRT 312
RT
Sbjct: 729 SRT 731
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 12/313 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL ++ + Y P Y + +R L K+ R + + +
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFTYTE--LIRGLGKAGRIDEAYHFFYEMQREGCRPDTVV 337
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR-LYDKVPILFDEI 158
+ N+I G+AG D AM+ F +M L SV+++N ++ A S+ +VP F+ +
Sbjct: 338 MNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERM 397
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ +SP +Y +L+ C + +KA+ LL EM+ KG Y ++++ L K
Sbjct: 398 -KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISY 275
+ A L+ E+++ Y V I + G RL + I DEM G PD +Y
Sbjct: 457 YDLACELFQELKENCGSSSARVYAVMIKHL--GKAGRLDDAINMFDEMNKLGCAPDVYAY 514
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KE 332
N LM+ + M+DEA ++E+GC P+ ++ + L +G +A ++ K+
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQ 574
Query: 333 SVMVHKIPDFNTV 345
S + + +NTV
Sbjct: 575 STVRPDVVSYNTV 587
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 14/315 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R L +++ ++ +I+ +P P L ++R G A M A+ F Q+
Sbjct: 130 IRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRK 189
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++N+++ Y KV L++E+ + + PD ++Y L+ + C G D A
Sbjct: 190 CQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSA 249
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+LLNEM+ G++ TT YT ++ +K + A L+ EM + DV Y I
Sbjct: 250 TQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRG 309
Query: 248 TYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G R+ E EM+ G +PDT+ N ++ K +D+A K+++ + C
Sbjct: 310 L--GKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCI 367
Query: 305 PNATTFRTWIYHLCGS----GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
P+ T+ T I L S ++ KES + P T +L++G K ++++
Sbjct: 368 PSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS---PSSFTYSILIDGFCKTNRMEK 424
Query: 361 AKGVIRTIKKK-FPP 374
A ++ + +K FPP
Sbjct: 425 AMMLLEEMDEKGFPP 439
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA+ + + + P + Y + L K+KR+ L + K + +
Sbjct: 423 EKAMMLLEEMDEKGFPPCPAAYCS--LIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ G+AG D A+ FD+M++LG V ++NAL+ R+ + D+ + ++
Sbjct: 481 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM-QE 539
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD SY ++L +G +A+E+L+ M+ V V+Y TVL L G EE
Sbjct: 540 HGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEE 599
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A +L EM G + D+ Y+
Sbjct: 600 AAKLMEEMNTLGFEYDLITYS 620
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 123/305 (40%), Gaps = 38/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + G D A + ++M E G + + L+ + LF+E+ +Y
Sbjct: 236 LISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQY 295
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y L++ +G D+A EM+ +G TV ++N L K G ++A
Sbjct: 296 -CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDA 354
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP---------ERLKE--------------- 258
+L+ EM V YN I + ER+KE
Sbjct: 355 MKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 414
Query: 259 -------------LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
L++EM + G P +Y L+ K + D A ++++ L+EN S
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A + I HL +G D A +F E + PD L+ GL + + EA +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 534
Query: 366 RTIKK 370
R +++
Sbjct: 535 RRMQE 539
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 136/267 (50%), Gaps = 7/267 (2%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
F A F +M G ++SF++L+ +R+R D+ + F ++ KK+ L PD + Y
Sbjct: 87 FSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDM-KKFGLVPDNVIYT 145
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ +C +G+ +AL++ +EM +G + + Y T+LN L K+ +A++L+ EM ++
Sbjct: 146 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 205
Query: 233 GVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G D + I + G+ + L M +KPD ++YN L+ +CK M++A
Sbjct: 206 GALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKA 265
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLV 349
++++G+ PN T+ I C G+ +A++++ VM+ K P T ++
Sbjct: 266 SELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW--DVMIEKGIKPTLVTCNTVI 323
Query: 350 EGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+G + +A + R I K P+
Sbjct: 324 KGYCRSGDSSKADEFLGRMIAKGVAPD 350
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 138/281 (49%), Gaps = 12/281 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +Y + G+ + A + M + G S+ ++NA++ C + R IL + +
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML--N 64
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSPD +Y LL C + +A E+ EM +GV V++++++ + + ++
Sbjct: 65 IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQ 124
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI--DEMRDAGLKPDTISYNFLM 279
A + +M+K G+ D Y V + + Y + L+ L DEM + G D I+YN ++
Sbjct: 125 ALVYFRDMKKFGLVPDNVIYTV-LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +M+ +A K+++ + E G P+ TF T I+ C GN KA +F +
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 243
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK----GVIRTIKKKFPPNV 376
PD L++G K ++++A G+I +K FP ++
Sbjct: 244 PDIVAYNTLIDGFCKVGEMEKASELWDGMIS--RKIFPNHI 282
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y L+ ++C G ++A E++N M +KG++ + TY ++N L K+G A+ + E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M G+ D YN + + D KE+ EM G+ PD +S++ LM + +N
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D+A + +++ G P+ + ++ C +GN +A K+ E + + D
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181
Query: 348 LVEGLVKKKKIKEA 361
++ GL K+K + +A
Sbjct: 182 ILNGLCKEKMLTDA 195
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 1/184 (0%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A + + L K K +D + L + + LI + Q G A+ F M
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+ ++++N L+ + +K L+D + + + P+ I+YG+L+ ++C G
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR-KIFPNHITYGILINAYCSVGH 296
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+A L + M KG++ T VT TV+ + G++ +A+ M KGV D +YN
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356
Query: 244 RITN 247
I +
Sbjct: 357 LIND 360
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ YC+ +++EA ++ + + G P+ T+ I LC G + +A + E
Sbjct: 2 VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ + PD T L+ ++ EAK + +++ P+++
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLV 107
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 142/280 (50%), Gaps = 3/280 (1%)
Query: 94 ITQEPYLCNLIR-SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
I+ Y+ N++ ++ + M AM F++M + G +V+++ L+ A + D
Sbjct: 375 ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAE 434
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+ F+++ + ++P+ + + L+ C +KA EL EM N+G+ V + T++
Sbjct: 435 LKFNQMINE-GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPD 271
L +G +A+RL ME+ G D+ +YN I + G + +L+D M GLKP+
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+YN L+ YC++ +D+A V++ + NG +P T+ T ++ L + F +A +++
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYL 613
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ K T +++ GL K + EA + +++ K
Sbjct: 614 NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSK 653
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y G D M G + FN + A + + + +F+++ ++
Sbjct: 350 ILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKM-RQQ 408
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP+ ++Y L+ + C G D A N+M N+GV V +T+++ L E+A
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKA 468
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ EM +G+ +V +N + N G + + LID M G +PD ISYN L+
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRG 528
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C DEA K+ + + G PN T+ T ++ C G D AY VF+E + P
Sbjct: 529 HCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPV 588
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++ GL K ++ EAK
Sbjct: 589 VVTYNTILHGLFKTRRFSEAK 609
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 129/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A F M + G P +V+++ ++ ++++ D+ +F ++ K
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK- 268
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y L+ + G + + +L EM G+E TY +L+ L K+G EA
Sbjct: 269 GVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEA 328
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L+ M +KG+ DV+ Y + I + Y G + +D M G+ P+ +N +
Sbjct: 329 RKLFDSMIRKGIKPDVSIYGI-ILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFC 387
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ K M+ EA ++ + + G SPN + T I LC G D A F + + P
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP 447
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
+ LV GL K ++A + + + PNV+
Sbjct: 448 NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVV 485
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 11/340 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+DI++ + + SP YA + L K R D E N+ +
Sbjct: 397 EAMDIFNKMRQQGLSPNVVNYAT--LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTS 454
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKK 161
L+ ++ A F +M G +V+ FN ++ CT R+ ++ ++ ++
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI--DLMER 512
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ISY L++ HC G +D+A +LL+ M + G++ TY T+L+ + G ++
Sbjct: 513 VGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDD 572
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNFL 278
A ++ EM G+ V YN + + R KEL M +G + +YN +
Sbjct: 573 AYSVFQEMLSNGITPVVVTYNTILHGLF--KTRRFSEAKELYLNMITSGKQWSIYTYNII 630
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ KN +DEA K+++ L + TF I L G + A +F
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGL 690
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+PD T +L+ E L+++ ++E G+ ++K PN L
Sbjct: 691 VPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSL 730
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+CNL G A R D M+ +GT +IS+NAL+ D+ L D I
Sbjct: 491 MCNLCTE----GRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLD-IM 545
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
L P++ +Y LL +C G D A + EM + G+ VTY T+L+ L+K
Sbjct: 546 LSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRF 605
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD--PERLKELIDEMRDAGLKPDTISYNF 277
EA+ L+ M G + YN+ + + E LK + + L+ D I++N
Sbjct: 606 SEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALK-MFQSLCSKDLQVDIITFNI 664
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K+ ++A ++ + NG P+ TT+R +L G+ ++ +F E
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ + LV L+ + I A + I +K
Sbjct: 725 CAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEK 758
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 122 QMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKY-NLSPDKISYGLLLKSHC 179
+M ELG +V+S+N LL C +R + + +L + + P+ +SY ++
Sbjct: 156 RMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFF 215
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G DKA L +M ++G+ VTYT V++ L K + AE ++ +M KGV ++
Sbjct: 216 TEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIV 275
Query: 240 AYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
Y I G + + ++ EM GL+PD +Y L+ CK EA+K+++ +
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G P+ + + ++ G + + V P+ ++ KK I
Sbjct: 336 IRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMI 395
Query: 359 KEAKGVIRTIKKK-FPPNVL 377
EA + ++++ PNV+
Sbjct: 396 GEAMDIFNKMRQQGLSPNVV 415
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 41/280 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF--ACTRSRLYDKVPILFDEIPK 160
L+ + + G +H F + + G + + L C R+ + + +L +
Sbjct: 100 LVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVLLRRM-S 158
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV---TTVTYTTVLNCLYKQG 217
+ +P+ +SY LLK CD +++ALELL+ M + V V+Y TV+N + +G
Sbjct: 159 ELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEG 218
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++A YN L +M D G+ P+ ++Y
Sbjct: 219 QVDKA------------------YN----------------LFLDMTDQGIPPNVVTYTI 244
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK +++D A+ V++ + + G PN T+ I+ G + + ++ KE
Sbjct: 245 VIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHG 304
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNV 376
PD T LL++ L KK K EA+ + + I+K P+V
Sbjct: 305 LEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDV 344
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 139/271 (51%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + ++ A + FD+M G ++FN+LL ++R +D+ + E+ ++
Sbjct: 249 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERV 307
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++Y L+ S+ G ++A+ L EME KG++ VTYTT+++ L + G + A
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAA 367
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ EM + G ++ YN +++ G PE + + DE+R AG PD +++N L+
Sbjct: 368 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA-VFDELRSAGFVPDIVTWNTLLA 426
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +N + E V++ +++ G P T+ + I G FD A +++K + P
Sbjct: 427 VFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP 486
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D +T ++ L + + ++A+ + ++++
Sbjct: 487 DVSTYNAVLSALARGGRWEQAEKLFAEMEER 517
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K I + +LI SY + G+FD AM+ + +M E G V ++NA+
Sbjct: 435 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV 494
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R +++ LF E+ ++ + PD+ SY LL ++ ++ DK L +++ ++
Sbjct: 495 LSALARGGRWEQAEKLFAEMEER-DCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
+E T++ K N EAE+ + E+ +K LD+ N ++ YG
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVS-IYGKNRMVRKV 612
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
GD E+ + ++ E++ +G++PD SYN ++
Sbjct: 613 EKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYA 672
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + M EA +++ ++ +G P+ T+ ++ + F++A ++ + V P+
Sbjct: 673 YGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPN 732
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T +VEG + K+ +AK + + + P
Sbjct: 733 ERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHP 764
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 17/310 (5%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R +A++ R ++ L+++ P Y L+ ++ +AG F A+ F +M + G
Sbjct: 147 AIRVMARAGRLAEASALLDAA---PGPDAGAYTA-LVSAFSRAGRFRDAVAVFRRMVDSG 202
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIP------KKYNLSPDKISYGLLLKSHCDS 181
+++++N +L +Y K+ + + E+ K++ ++PD+ +Y L+
Sbjct: 203 VQPAIVTYNVVL------HVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRR 256
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+A ++ +EM+ G E VT+ ++L+ K +EA + EME+ G V Y
Sbjct: 257 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTY 316
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N I++ G E+ L EM G+KPD ++Y L++ + +D A Y+ +
Sbjct: 317 NSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 376
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NGC PN T+ I G F + VF E +PD T L+ + E
Sbjct: 377 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSE 436
Query: 361 AKGVIRTIKK 370
GV + +KK
Sbjct: 437 VSGVFKEMKK 446
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 155/328 (47%), Gaps = 14/328 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTV---RRLAKSKRFSDIETLIESHKNDP-KITQEP 98
+ +++ +S+ +H +P RY + + RR A K + + +++ +P K+T
Sbjct: 226 EVVELVASMKEHGVAP--DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT--- 280
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+L+ YG+A D A+ +M+ +G P SV+++N+L+ + + L ++ L E+
Sbjct: 281 -FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + PD ++Y L+ +G D A+ +EM G + TY ++ +G
Sbjct: 340 EVK-GIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGK 398
Query: 219 AEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
E ++ E+ G D+ +N + + G D E + + EM+ AG P+ +Y
Sbjct: 399 FPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSE-VSGVFKEMKKAGYIPERDTYV 457
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L++ Y + + D A ++Y+ + E G P+ +T+ + L G +++A K+F E
Sbjct: 458 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 517
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PD + L+ K++ + K +
Sbjct: 518 DCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 139/313 (44%), Gaps = 42/313 (13%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+P LC LI+ +G G F M FD++ G ++++N LL ++ L +V
Sbjct: 380 KPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSG 439
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F E+ KK P++ +Y L+ S+ G D A+++ M G+ TY VL+ L
Sbjct: 440 VFKEM-KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKP- 270
+ G E+AE+L++EME++ D +Y+ + + Y +++K L D++ ++P
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYS-SLLHAYANAKRLDKMKALSDDIYSERIEPH 557
Query: 271 ----------------------------------DTISYNFLMTCYCKNEMMDEAKKVYE 296
D N +++ Y KN M+ + +K+
Sbjct: 558 NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS 617
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
++E+ + +A T+ + ++ G+ +K + E PD + ++ +K
Sbjct: 618 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 677
Query: 357 KIKEAKGVIRTIK 369
++KEA + +K
Sbjct: 678 QMKEASRLFSEMK 690
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
+A F+ + +G V S+N ++ + + ++ L+ E+ +K N+ P+ ++Y L
Sbjct: 318 YAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQK-NMVPNTVTYNSL 376
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C SG A +L++EM ++G +TY +++N L K G ++A L ++M+ +G+
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436
Query: 235 DLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
D+ N+ + G + + L ++ D G P+ +YN ++ +CK ++DEA
Sbjct: 437 QPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAY 496
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ +E++GCSPNA TF+ I L G DKA K+ E +
Sbjct: 497 ALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMI 538
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 3/266 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ F +M + +I FN +L + + + Y V L + K + PD + +
Sbjct: 45 DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELK-AIQPDFFTLNI 103
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G + A +L+++ G + TVT TT++ L +G ++A ++ +G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
LD +Y I G+ +L+ + +P+ + YN ++ C CK +++ EA
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ + G S N T+ I+ C G +A E V+ PD LV+ L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVL 377
K+ K+KEAK V+ I K PNV+
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVI 309
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 140/304 (46%), Gaps = 31/304 (10%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A++ ++D T +V+ +N ++ + +L + LF E+ K
Sbjct: 174 LINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVK- 232
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+S + ++Y ++ C G +AL LNEM K + Y T+++ L+K+G +EA
Sbjct: 233 GISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEA 292
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI----------TNTYGGDPE---------------RLK 257
+ + + + K + +V YN I G P+ R++
Sbjct: 293 KNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVE 352
Query: 258 E---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
E L EM + P+T++YN L+ CK+ + A + + + + G N T+ + I
Sbjct: 353 EALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLI 412
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV-KKKKIKEAKGVIR-TIKKKF 372
LC +G DKA + + PD T+ +L+ GL+ K K++K A+G+ + + K +
Sbjct: 413 NGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGY 472
Query: 373 PPNV 376
PNV
Sbjct: 473 HPNV 476
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++AL++Y + + P + Y + L KS R S LI+ +
Sbjct: 352 EEALNLYKEMHQKNMVPNTVTYNS--LIDGLCKSGRISYAWDLIDEMHDRGHHANVITYN 409
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL--FACTRSRLYDKVPILFDEIP 159
+LI + G D A+ ++M + G + + N LL C RL + + D +
Sbjct: 410 SLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLD 469
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K Y+ P+ +Y +++ HC G D+A L ++ME+ G +T+ ++ L ++G
Sbjct: 470 KGYH--PNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGET 527
Query: 220 EEAERLWSEMEKKGV 234
++AE+L EM +G+
Sbjct: 528 DKAEKLLCEMIARGL 542
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y + GM D+A+ TF+ + +G SV + N +L + + + + V LF E+ K
Sbjct: 920 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDK- 978
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++ +L+ C G+ KA LL +ME G T VTY T+LN K+G + A
Sbjct: 979 GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M KG++ DV YNV I N + L+ +MR + P+ ++YN L+
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ K + A +V+ + + SPN T+ I C G+F++A ++ +
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T L+ GL K +K + AK ++ ++
Sbjct: 1159 EVTYGTLLNGLCKHEKFELAKRLLERMR 1186
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
E+ +P V ++N L+ + +F+E+ K++LSP+ ++Y L+ HC G
Sbjct: 1083 EMISPNEV-TYNTLINGFVKEGKIGVAAQVFNEM-SKFDLSPNCVTYNALIGGHCHVGDF 1140
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
++AL LL+ ME G+ + VTY T+LN L K E A+RL M + + AY V
Sbjct: 1141 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 1200
Query: 245 ITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I G + +L+ M G+ PD I+Y+ L+ +C+ + AK++ + +G
Sbjct: 1201 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 1260
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
N + T IY+ C GN +A KV+ D T +LV L + K+ EA+
Sbjct: 1261 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 11/313 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K ++F + L+E + + + LI + GM D A++ M + G
Sbjct: 1169 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 1228
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKY--NLSPDKISYGLLLKSHCDSGSSDKALE 189
VI++++L+ R + + I + Y L +KI Y L+ + C G+ +A++
Sbjct: 1229 VITYSSLINGFCR---VGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 1285
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+ M G T +++ L + G EAE+ M + G+ + Y+ I N Y
Sbjct: 1286 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC-IINGY 1344
Query: 250 G--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G GDP D+M G P +Y L+ CK + EAKK L + ++
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 1404
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ T + C SGN +A +F + V + +PD T L+ GL +K K A + T
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464
Query: 368 IKKK---FPPNVL 377
+ FP +V+
Sbjct: 1465 AMGRGTLFPNHVM 1477
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L++ + G A + +++ + + +N LL C L++ V LFD++ +
Sbjct: 1374 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA-LFDKMVQ 1432
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV-TTVTYTTVLNCLYKQGNA 219
N+ PD +Y LL C G + A+ L +G V YT +++ L K G+
Sbjct: 1433 N-NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHP 1491
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A + EM KKG D A+N I + + G + + MR G+ P+ +YN L
Sbjct: 1492 KAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNIL 1551
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K + + +Y + G P+ TF + I L SG D K+ + +M
Sbjct: 1552 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 1611
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
+ D T +L+ + K+++A
Sbjct: 1612 LADQFTFNILINKYSESGKMRKA 1634
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+A M+D A + ++G I F AL+ D P L + IP ++L
Sbjct: 875 KARMYDSAKSILRHLCQMGIGSKSI-FGALM---------DTYP-LCNSIPSVFDL---- 919
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
L++ + G D A+E + G + + T +L + K E L+ E
Sbjct: 920 -----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 974
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M KG+ +V +N+ I G+ ++ L+ +M + G P ++YN L+ YCK
Sbjct: 975 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
A ++ + + G + T+ +I +LC + KAY + K+ P+ T
Sbjct: 1035 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 1094
Query: 348 LVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
L+ G VK+ KI A V + K PN +
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 1125
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 123/275 (44%), Gaps = 10/275 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++G+ D ++ +M GT +FN L+ + S K+ FD +
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSES---GKMRKAFDLVNFM 1641
Query: 162 YNLS--PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
L PD+ +Y + + ++ +L+EM GV Y T++N + + G+
Sbjct: 1642 NTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDI 1701
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A +L EME G A + + + G E ++D M L P ++ L
Sbjct: 1702 QGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTL 1761
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M +C++ + EA K+ +E G + + I +C +G+ A+++++E M H+
Sbjct: 1762 MHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEE--MRHR 1819
Query: 339 --IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T +LV+ + + + + ++ ++++
Sbjct: 1820 DLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1854
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ Q G AM+ + M+ G + N L+ + C +L + L +
Sbjct: 1270 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM--SR 1327
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ I+Y ++ + G A ++M G + TY ++L L K GN E
Sbjct: 1328 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 1387
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++ + + +D YN + T G+ L D+M + PD+ +Y+ L+T
Sbjct: 1388 AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 1447
Query: 281 CYCKNEMMDEAKKVY-EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ A ++ + PN + + L +G+ A+ F+E +
Sbjct: 1448 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 1507
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD +++ ++ ++ +A T++
Sbjct: 1508 PDTVAFNAIIDSCSRRGQMMKANDFFSTMR 1537
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
GLL HC G ++ A+ +L+ M + T T+TT+++ + EA +L ME
Sbjct: 1729 GLL---HC--GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1783
Query: 232 KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
G+ LDV AYNV I GD EL +EMR L P+ +Y L+ + +
Sbjct: 1784 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1843
Query: 291 AKKVYEGLEENG 302
+K+ L+E G
Sbjct: 1844 GEKLLTDLQERG 1855
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKK 161
++R G + AM D M + ++ +F L+ C +++ + + + + +
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL--KGVMEL 1783
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D ++Y +L+ C +G S A EL EM ++ + TY +++ + N +
Sbjct: 1784 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1843
Query: 222 AERLWSEMEKKGV 234
E+L ++++++G+
Sbjct: 1844 GEKLLTDLQERGL 1856
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 10/279 (3%)
Query: 100 LCN--------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
LCN LIR Y + GM D+A+ TF+ + +G SV + N +L + + + + V
Sbjct: 158 LCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 217
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
LF E+ K + P+ ++ +L+ C G+ KA LL +ME G T VTY T+LN
Sbjct: 218 WSLFREMSDK-GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 276
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKP 270
K+G + A L M KG++ DV YNV I N + L+ +MR + P
Sbjct: 277 WYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP 336
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ ++YN L+ + K + A +V+ + + SPN T+ I C G+F++A ++
Sbjct: 337 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 396
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ T L+ GL K +K + AK ++ ++
Sbjct: 397 DHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
E+ +P V ++N L+ + +F+E+ K++LSP+ ++Y L+ HC G
Sbjct: 332 EMISPNEV-TYNTLINGFVKEGKIGVAAQVFNEM-SKFDLSPNCVTYNALIGGHCHVGDF 389
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
++AL LL+ ME G+ + VTY T+LN L K E A+RL M + + AY V
Sbjct: 390 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 449
Query: 245 ITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I G + +L+ M G+ PD I+Y+ L+ +C+ + AK++ + +G
Sbjct: 450 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 509
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
N + T IY+ C GN +A KV+ D T +LV L + K+ EA+
Sbjct: 510 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 11/313 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K ++F + L+E + + + LI + GM D A++ M + G
Sbjct: 418 LCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPD 477
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKY--NLSPDKISYGLLLKSHCDSGSSDKALE 189
VI++++L+ R + + I + Y L +KI Y L+ + C G+ +A++
Sbjct: 478 VITYSSLINGFCR---VGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMK 534
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+ M G T +++ L + G EAE+ M + G+ + Y+ I N Y
Sbjct: 535 VYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC-IINGY 593
Query: 250 G--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G GDP D+M G P +Y L+ CK + EAKK L + ++
Sbjct: 594 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 653
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ T + C SGN +A +F + V + +PD T L+ GL +K K A + T
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713
Query: 368 IKKK---FPPNVL 377
+ FP +V+
Sbjct: 714 AMGRGTLFPNHVM 726
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 5/263 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPK 160
+L++ + G A + +++ + + +N LL C L++ V LFD++ +
Sbjct: 623 SLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVA-LFDKMVQ 681
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV-TTVTYTTVLNCLYKQGNA 219
N+ PD +Y LL C G + A+ L +G V YT +++ L K G+
Sbjct: 682 N-NVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHP 740
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A + EM KKG D A+N I + + G + + MR G+ P+ +YN L
Sbjct: 741 KAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNIL 800
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K + + +Y + G P+ TF + I L SG D K+ + +M
Sbjct: 801 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 860
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
+ D T +L+ + K+++A
Sbjct: 861 LADQFTFNILINKYSESGKMRKA 883
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+A M+D A + ++G I F AL+ D P L + IP ++L
Sbjct: 124 KARMYDSAKSILRHLCQMGIGSKSI-FGALM---------DTYP-LCNSIPSVFDL---- 168
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
L++ + G D A+E + G + + T +L + K E L+ E
Sbjct: 169 -----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M KG+ +V +N+ I G+ ++ L+ +M + G P ++YN L+ YCK
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
A ++ + + G + T+ +I +LC + KAY + K+ P+ T
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343
Query: 348 LVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
L+ G VK+ KI A V + K PN +
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 374
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 144/334 (43%), Gaps = 12/334 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA D +S++ P + Y ++ + +K + +L + + + +
Sbjct: 777 KANDFFSTMRWWGVCPNLATY--NILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHS 834
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++G+ D ++ +M GT +FN L+ + S K+ FD +
Sbjct: 835 LILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSES---GKMRKAFDLVNFMN 891
Query: 163 NLS--PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L PD+ +Y + + ++ +L+EM GV Y T++N + + G+ +
Sbjct: 892 TLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQ 951
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L EME G A + + + G E ++D M L P ++ LM
Sbjct: 952 GAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLM 1011
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK- 338
+C++ + EA K+ +E G + + I +C +G+ A+++++E M H+
Sbjct: 1012 HRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEE--MRHRD 1069
Query: 339 -IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T +LV+ + + + + ++ ++++
Sbjct: 1070 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1103
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ Q G AM+ + M+ G + N L+ + C +L + L +
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM--SR 576
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ I+Y ++ + G A ++M G + TY ++L L K GN E
Sbjct: 577 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 636
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++ + + +D YN + T G+ L D+M + PD+ +Y+ L+T
Sbjct: 637 AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 696
Query: 281 CYCKNEMMDEAKKVY-EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ A ++ + PN + + L +G+ A+ F+E +
Sbjct: 697 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 756
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD +++ ++ ++ +A T++
Sbjct: 757 PDTVAFNAIIDSCSRRGQMMKANDFFSTMR 786
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
GLL HC G ++ A+ +L+ M + T T+TT+++ + EA +L ME
Sbjct: 978 GLL---HC--GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1032
Query: 232 KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
G+ LDV AYNV I GD EL +EMR L P+ +Y L+ + +
Sbjct: 1033 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1092
Query: 291 AKKVYEGLEENG 302
+K+ L+E G
Sbjct: 1093 GEKLLTDLQERG 1104
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKK 161
++R G + AM D M + ++ +F L+ C +++ + + + + +
Sbjct: 975 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL--KGVMEL 1032
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D ++Y +L+ C +G S A EL EM ++ + TY +++ + N +
Sbjct: 1033 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1092
Query: 222 AERLWSEMEKKGV 234
E+L ++++++G+
Sbjct: 1093 GEKLLTDLQERGL 1105
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
SV+SFNAL+ + D F + K Y L PD SY +LL C +GS ++ALE
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIK-YGLLPDVYSYNILLHGLCVAGSMEEALEF 327
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTY 249
N+MEN GVE VTY + N G A ++ M G++ D+ Y + I +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ E +L ++M GLK ++Y L++ CK+ +DEA + +E G P+ T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ I+ LC G ++A ++++E P+ ++ GL +K I EA+ ++
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507
Query: 370 K 370
K
Sbjct: 508 K 508
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 141/291 (48%), Gaps = 16/291 (5%)
Query: 94 ITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKV 151
+ +E L N +I Y + G A+R++ Q+ E G ++++FN+L++ C + +L + V
Sbjct: 511 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 570
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+L D I K + L P ++Y L+ +C+ G ++L+EME K ++ T +TYT V+
Sbjct: 571 KLL-DTI-KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 628
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKP 270
L K+G E+ +L M +G+ D YN I + D ++ +L ++M L+P
Sbjct: 629 GLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 688
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
++YN L+ C + +A ++ L++ + T I C G+ A F
Sbjct: 689 SPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFF 748
Query: 331 KESVMVHK-----IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
+ MV + I D++ V + L K+ I +AK + PP+
Sbjct: 749 HQ--MVERGFEVSIRDYSAV---INRLCKRNLITDAKFFFCMMLTHGIPPD 794
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 154/381 (40%), Gaps = 67/381 (17%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIR-- 105
+S VS S V +R Q +RR+ + ++E + + LCN R
Sbjct: 113 HSRVSWFIVSHVVARKGQSKELRRV--------LNQMVEEEGSGSAPSLCELLCNSFRDW 164
Query: 106 ------------SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF------------- 140
+Y +A M A+ +M L S+ ++N+LL+
Sbjct: 165 DLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYN 224
Query: 141 --------------------ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
C +SRL D V L + +++ P +S+ L+ C
Sbjct: 225 EIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEF--GPSVVSFNALMSGFCK 282
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
GS D A M G+ +Y +L+ L G+ EEA ++ME GV+ D+
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342
Query: 241 YNV-----RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
YN+ RI G +++ M GL PD ++Y L+ +C+ ++E+ K+
Sbjct: 343 YNILANGFRILGLISGA----WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLK 398
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
E + G + T+ + LC SG D+A + E ++ PD T +L+ GL K+
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458
Query: 356 KKIKEAKGVIRTI-KKKFPPN 375
++EA + + K+ PN
Sbjct: 459 GAVEEAIELYEEMCSKRIYPN 479
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 129/270 (47%), Gaps = 6/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ AG + A+ + M+ G ++++N L R+ + + + +
Sbjct: 311 LLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL---ANGFRILGLISGAWKVVQRML 367
Query: 163 --NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L+PD ++Y +L+ HC G+ +++ +L +M ++G++++ VTYT +L+ L K G +
Sbjct: 368 LNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRID 427
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L EME G+ D+ Y+V I G E EL +EM + P++ + ++
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAII 487
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + + EA+ ++ + ++ + + I GN +A + +K+ +
Sbjct: 488 SGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGIS 547
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
P T L+ G KK K+ EA ++ TIK
Sbjct: 548 PTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 577
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 135/306 (44%), Gaps = 39/306 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL----------------------- 139
L+ S ++G D A+ +M+ +G +++++ L+
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475
Query: 140 -----FACTR--SRLYDKVPI-----LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
F C+ S L++K I FD + K +++ + I Y +++ + G+ +A
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKS-DVAEEIILYNIMIDGYAKLGNIGEA 534
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ ++ KG+ T VT+ +++ K+G EA +L ++ G+ Y + N
Sbjct: 535 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT-LMN 593
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
Y GD + +++ EM +KP I+Y ++ CK + E+ ++ + + G P
Sbjct: 594 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 653
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I C + + KA+++ + + P T +L+ GL +K+A ++
Sbjct: 654 DQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 713
Query: 366 RTIKKK 371
T++ +
Sbjct: 714 VTLQDQ 719
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 142 CTRSRLYDKVPILFDEIPKKY----NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
C RL++ V +L KY L PD+I+Y +++S C + KA +L N+M
Sbjct: 631 CKEGRLHESVQLL------KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 684
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERL 256
++ + VTY ++N L GN ++A+RL ++ + + L AY I + GD +
Sbjct: 685 SLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNA 744
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+M + G + Y+ ++ CK ++ +AK + + +G P+ +
Sbjct: 745 LVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNA 804
Query: 317 LCGSGNFDKAYKVFKESVMVHKIP 340
SG+ + +++F + +P
Sbjct: 805 FHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 12/252 (4%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIET 83
+S++ + + E D D+ + P Y + V+ L K R +
Sbjct: 584 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYT--VVVKGLCKEGRLHESVQ 641
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-C 142
L++ + +I+S+ +A A + +QM + S +++N L+ C
Sbjct: 642 LLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLC 701
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
L D +L + L+ K++Y ++K+HC G AL ++M +G EV+
Sbjct: 702 VYGNLKDADRLLVTLQDQSIRLT--KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVS 759
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV--DLDVAAYNVRITNTY--GGDPERLKE 258
Y+ V+N L K+ +A+ + M G+ D D+ + + N + GDP + E
Sbjct: 760 IRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDIC---LVMLNAFHRSGDPNSVFE 816
Query: 259 LIDEMRDAGLKP 270
+ M GL P
Sbjct: 817 IFAMMIKCGLLP 828
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 114/283 (40%), Gaps = 56/283 (19%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGV-------- 199
D LFD + +Y ++S+ ++ G S + +LN+M E +G
Sbjct: 96 DSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCE 155
Query: 200 ---------EVTTVTYTTVLNCLYKQGN-AEEAERLWSEMEKKGVDLDVAAYNVRITNT- 248
++ V + +L C Y + +A + ++M+ + + +A YN + N
Sbjct: 156 LLCNSFRDWDLNNVVW-DMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLR 214
Query: 249 -------------YGGDPE----------------RLKELIDEMRDAG---LKPDTISYN 276
G P+ RL++ + +R+ G P +S+N
Sbjct: 215 HTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFN 274
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM+ +CK +D AK + + + G P+ ++ ++ LC +G+ ++A + F +
Sbjct: 275 ALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE-FTNDMEN 333
Query: 337 HKI-PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
H + PD T +L G I A V+ R + P+++
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLV 376
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + FD+M E G +++++N L+ R ++ + D++ K ++P+ I+Y L+
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM-KSDGINPNLITYNTLI 345
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C KAL L +++++G+ + VTY +++ K+G+ A ++ EME++G+
Sbjct: 346 DGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405
Query: 236 LDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
Y + I T + E+ +L M + GL PD +Y+ L+ +C M+EA ++
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + E PN + T + C G+ +A ++F+E P+ + + ++E L K
Sbjct: 466 FKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525
Query: 355 KKKIKEAKGVI 365
++K KEA+G++
Sbjct: 526 ERKSKEAEGLV 536
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 137/270 (50%), Gaps = 3/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +Y Q+ D ++ F++M + G FN LL S +++ F+E K
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE--SKI 157
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ D S+G+++K C++G +K+ +LL E+ G V YTT+++ K+G E+A
Sbjct: 158 KVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ EM K G+ + Y V I + G ++ E+ ++M++ G+ P+ +YN +M
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQ 277
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ +A KV++ + E G S N T+ T I LC ++A +V + P+
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L++G +K+ +A + R +K +
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSR 367
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 135/277 (48%), Gaps = 7/277 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A F +M + G + ++ L+ ++ + + +++++ +++
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEH 262
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y ++ C G + A ++ +EM +GV VTY T++ L ++ A EA
Sbjct: 263 GVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEA 322
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA---GLKPDTISYNFLM 279
+ +M+ G++ ++ YN I G +L + + RD GL P ++YN L+
Sbjct: 323 NEVMDQMKSDGINPNLITYNTLIDGFCG--VRKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ +CK A KV + +EE G P+ T+ I S N +KA ++ +
Sbjct: 381 SGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLT 440
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
PD +T +L+ G K ++ EA + ++ ++KKF PN
Sbjct: 441 PDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPN 477
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 139/277 (50%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G+ +++M E G ++ ++N ++ C R D + FDE+ ++
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKV-FDEMRER 297
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + ++Y L+ C +++A E++++M++ G+ +TY T+++ +
Sbjct: 298 -GVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGK 356
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +++ +G+ + YN+ ++ GD +++ EM + G+KP ++Y L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILID 416
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +++ M++A ++ +EE G +P+ T+ I+ C G ++A ++FK V P
Sbjct: 417 TFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEP 476
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
+ +V G K+ A + R + +K+ PPNV
Sbjct: 477 NEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNV 513
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 51/306 (16%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+ ++Y + +H P Y + + +L K R D + K ++ + CN
Sbjct: 251 QGFEMYEKMQEHGVFPNLHTY--NCVMNQLCKDGRTKD------AFKVFDEMRERGVSCN 302
Query: 103 LIRSYGQAGMFDHAMR------TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
++ G M+ DQM G ++I++N L+ R K L
Sbjct: 303 IVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCR 362
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
++ K LSP ++Y +L+ C G + A +++ EME +G++ + VTYT +++ +
Sbjct: 363 DL-KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRI------------------------------- 245
N E+A +L S ME+ G+ DV Y+V I
Sbjct: 422 DNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIY 481
Query: 246 -TNTYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
T G G R L EM + L P+ SY +++ CK EA+ + E + +
Sbjct: 482 NTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMID 541
Query: 301 NGCSPN 306
+G P+
Sbjct: 542 SGIGPS 547
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 42/246 (17%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVE---------VTTVTYTTVLN---CLYKQ-- 216
Y +++ ++ S S D ++ NEM +KG +T V ++ N C + +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 217 --------------------GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPER 255
G E++ L E+ + G +V Y I G+ E+
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
K+L EM GL + +Y L+ KN + + ++YE ++E+G PN T+ +
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276
Query: 316 HLCGSGNFDKAYKVF---KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
LC G A+KVF +E + I +NT L+ GL ++ K EA V+ +K
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT---LIGGLCREMKANEANEVMDQMKSDG 333
Query: 372 FPPNVL 377
PN++
Sbjct: 334 INPNLI 339
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 9/265 (3%)
Query: 93 KITQEPYLCNLIR-SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD- 149
+I+ Y N++ ++ + G + A+ F +M+ +G ++ S+N L+ C + L
Sbjct: 176 RISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSG 235
Query: 150 -KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
K+ IL + K + PD +++ L+ C G +A ++ +EM+ V T+TY T
Sbjct: 236 MKLKILME----KNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 291
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG 267
++N + GN+E RL EM + G+ D+ YN I G ++ L+ E+
Sbjct: 292 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDREN 351
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
L P++ +++ L+T C + + A ++Y+ + +GC PN TF+ I C + +FD A
Sbjct: 352 LVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAV 411
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGL 352
+V +E PD +T+ L GL
Sbjct: 412 EVVREMSERSIAPDSDTLSELCRGL 436
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 4/260 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ + +M +V + N ++ A + +K +F ++ + SP SY
Sbjct: 163 DIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKM-ETMGFSPTITSYNT 221
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ +C+ G + ++L ME GV VT+ T++N + G EA +++SEM+
Sbjct: 222 LIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND 281
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V + YN I N Y G+ E L DEM G+K D ++YN L+ C +A
Sbjct: 282 VVPNTITYNTLI-NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKA 340
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ + L+ PN++TF I C N ++A++++K + P+++T K+L+
Sbjct: 341 AYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLIST 400
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
K + A V+R + ++
Sbjct: 401 FCKNEDFDGAVEVVREMSER 420
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
F A+L++ R+ D P +FD L K++ A+++ +M
Sbjct: 97 FEAILYS---YRICDSSPCVFDS----------------LFKTYAQMKKLRNAIDVFCQM 137
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNTYGGDP 253
++ G + ++ + A + EM++ + +V N V G
Sbjct: 138 KDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKL 197
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
E+ E+ +M G P SYN L+ YC +++ K+ +E+NG P+ TF T
Sbjct: 198 EKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTL 257
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
I C G +A K+F E +P+ T L+ G
Sbjct: 258 INGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLING 295
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 140/308 (45%), Gaps = 39/308 (12%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
SY +AGM +A+R M + G + N ++ + +K + F E K +
Sbjct: 241 SYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKA-LRFLERMKVAGIE 299
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGV---------------------EVT-- 202
PD +SY L+K +CD D ALEL+ EM KG EV
Sbjct: 300 PDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRL 359
Query: 203 -------------TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
VTY T++ L K G+A++A E E+KG +D Y+ + +
Sbjct: 360 MENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFC 419
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+ ++ K L+ +M G PD ++Y ++ +C+ +DEAKK+ + + ++GC PN
Sbjct: 420 KNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTV 479
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-T 367
T+ + LC +G +A ++ S P+ T ++ GL ++ K+ EA + R
Sbjct: 480 TYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREM 539
Query: 368 IKKKFPPN 375
I+K F PN
Sbjct: 540 IEKGFLPN 547
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 162/362 (44%), Gaps = 14/362 (3%)
Query: 5 RHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYA 64
R I RL T S S + VS +++ + AL I + + K P S
Sbjct: 217 RRILRLMTRRGIERSPEAFSYVMVSYSRAGMLR-----NALRILTLMQKAGVEPDLSICN 271
Query: 65 QDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFD 121
+ V L K + +E K +P I Y C LI+ Y D A+
Sbjct: 272 TAIYV--LVKGNKLEKALRFLERMKVAGIEPDIVS--YNC-LIKGYCDVHRIDDALELIA 326
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M G P +S+ ++ + R ++V L + + + NL PD+++Y L+ +
Sbjct: 327 EMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKH 386
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G +D AL L E E KG + V Y+ V++ K N ++A+ L +M KG + DV Y
Sbjct: 387 GHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTY 446
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
I G + K+++ +M G KP+T++Y L+ C N EA+++ EE
Sbjct: 447 TAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEE 506
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+ +PNA T+ ++ L G +A + +E + +P+ + LL++ L + + +
Sbjct: 507 HWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVG 566
Query: 361 AK 362
AK
Sbjct: 567 AK 568
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 13/331 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K ++ +++ L+E+ + + + N LI + + G D A+ + +E G
Sbjct: 347 LCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHI 406
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++A++ + +++ DK L ++ K +PD ++Y ++ C G D+A ++
Sbjct: 407 DKVGYSAVVDSFCKNKNIDKAKSLVIDMYSK-GCNPDVVTYTAIIDGFCRVGKIDEAKKM 465
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
L +M G + TVTYT +LN L G + EA + + E+ + Y+ +
Sbjct: 466 LQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRR 525
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G +L EM + G P+ + N L+ C+N+ + AKK E GC+ N
Sbjct: 526 EGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVN 585
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTI 368
F + IY C G+ D A + ++ + +K PD T L + L KK ++ EA + +++ +
Sbjct: 586 FTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKML 645
Query: 369 KKKFPPN--VLRA-------WKKVEEELGLV 390
K P RA W +V++ + L+
Sbjct: 646 GKGIDPTPVTYRAVIHRFCQWGRVDDMMKLL 676
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
SP+ SY ++ S+ +G AL +L M+ GVE T + L K E+A R
Sbjct: 231 SPEAFSY--VMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALR 288
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTC 281
M+ G++ D+ +YN I D R+ ELI EM G PD +SY +M
Sbjct: 289 FLERMKVAGIEPDIVSYNCLIKGY--CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAF 346
Query: 282 YCKNEMMDEAKKVYEGLEEN-GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ ++E K++ E + +N P+ T+ T IY L G+ D A +E+
Sbjct: 347 LCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHI 406
Query: 341 DFNTVKLLVEGLVKKKKIKEAKG-VIRTIKKKFPPNVL 377
D +V+ K K I +AK VI K P+V+
Sbjct: 407 DKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVV 444
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 138 LLFACTRSRLYDKVPI-LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ A RS+ +++ + F +++ D I Y +L + A +L M
Sbjct: 166 LVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTR 225
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ER 255
+G+E + ++ V+ + G A R+ + M+K GV+ D++ N I G+ E+
Sbjct: 226 RGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEK 285
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
++ M+ AG++PD +SYN L+ YC +D+A ++ + GC P+ ++ T +
Sbjct: 286 ALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMA 345
Query: 316 HLCGSGNFDKAYKVFKESVM-VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LC ++ ++ + V + IPD T L+ L K +A +R ++K
Sbjct: 346 FLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEK 402
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 40/279 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ S+ + D A M G V+++ A++ R D+ + ++ K+
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM-YKH 472
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ ++Y +LL C +G S +A E++N E +TY+ V++ L ++G EA
Sbjct: 473 GCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEA 532
Query: 223 ERLWSEMEKKG-----VDLDVAAYN-----------------------VRITN----TYG 250
L EM +KG VD+++ + V + N YG
Sbjct: 533 CDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYG 592
Query: 251 ----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
GD + ++++M + PD I+Y L K +DEA ++ + G P
Sbjct: 593 FCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPT 652
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
T+R I+ C G D K+ ++ M+ + P F TV
Sbjct: 653 PVTYRAVIHRFCQWGRVDDMMKLLEK--MIARQP-FKTV 688
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 8/190 (4%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ ++ C G D AL +L +M +TYTT+ + L K+ +EA L +
Sbjct: 584 VNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVK 643
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M KG+D Y I G + + +L+++M +P YN ++ C
Sbjct: 644 MLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKM--IARQPFKTVYNQVIEKLCYFGN 701
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN---- 343
+EA+K+ + +A T I GN AYKV + + IPD
Sbjct: 702 REEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEK 761
Query: 344 -TVKLLVEGL 352
T KL+++G+
Sbjct: 762 VTKKLVLDGM 771
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 154/381 (40%), Gaps = 79/381 (20%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y A+ DQM + + ++FN L+
Sbjct: 127 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 186
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + + PD +YG ++ C G D AL LL +ME +E V YTT+
Sbjct: 187 EAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 245
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYG--GDPERL--------- 256
++ L N +A L++EM+ KG+ +V YN +R YG D RL
Sbjct: 246 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 305
Query: 257 -----------------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
++L DEM + PD +Y+ L+ +C ++ +DEAK
Sbjct: 306 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 365
Query: 294 VYEGLEENGCSPNATTFRTWIYHLC----------------------------------- 318
++E + C PN T+ T I C
Sbjct: 366 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 425
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+G+ D A K+FK+ V PD T +L++GL K K+++A V ++K K P++
Sbjct: 426 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 485
Query: 378 RAWKKVEEELGLVPAPAVGDG 398
+E G+ A V DG
Sbjct: 486 TYNIMIE---GMCKAGKVEDG 503
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR G + A R M E +V++F+AL+ A + + L+DE+ K+
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ PD +Y L+ C D+A + M +K VTY T++ K EE
Sbjct: 339 -SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 397
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM ++G+ + YN I + GD + +++ +M G+ PD I+Y+ L+
Sbjct: 398 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 457
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +++A V+E L+++ P+ T+ I +C +G + + +F + P
Sbjct: 458 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ ++ G +K +EA + R +K+
Sbjct: 518 NVIIYTTMISGFCRKGLKEEADALFREMKE 547
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 148/315 (46%), Gaps = 12/315 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
+ AL++++ + P Y +R L R+SD L+ K +P +
Sbjct: 256 NDALNLFTEMDNKGIRPNVVTYNS--LIRCLCNYGRWSDASRLLSDMIERKINPNVVT-- 311
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
LI ++ + G A + +D+M + + ++++L+ C RL D+ +F+
Sbjct: 312 -FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFEL 369
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K + P+ ++Y L+K C + ++ +EL EM +G+ TVTY T++ L++ G
Sbjct: 370 MISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 428
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYN 276
+ + A++++ +M GV D+ Y++ + G E+ + + ++ + ++PD +YN
Sbjct: 429 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 488
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK +++ ++ L G PN + T I C G ++A +F+E
Sbjct: 489 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 548
Query: 337 HKIPDFNTVKLLVEG 351
+P+ T L+
Sbjct: 549 GTLPNSGTYNTLIRA 563
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M L + S+N L+ C RS+L + +L +
Sbjct: 70 LLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLG 129
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ LL +C +A+ L+++M + TVT+ T+++ L+ A E
Sbjct: 130 Y--EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 187
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M +G D+ Y + GD + L+ +M ++ D + Y ++
Sbjct: 188 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 247
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + +++A ++ ++ G PN T+ + I LC G + A ++ + + P
Sbjct: 248 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 307
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K+ EA+ + IK+ P++
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 345
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ QAG D A + F +M G P +I+++ LL + +K ++F E +K
Sbjct: 420 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF-EYLQKS 478
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y ++++ C +G + +L + KGV+ + YTT+++ ++G EEA
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPD--TIS 274
+ L+ EM++ G + YN I GD ELI EMR G D TIS
Sbjct: 539 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 593
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 7/228 (3%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF E+ + L P + + LL + D + L M+N + +Y ++NC
Sbjct: 51 LFGEMVQSRPL-PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 109
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKP 270
++ A + +M K G + D+ + + G +R+ E L+D+M +P
Sbjct: 110 CRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG--KRISEAVALVDQMFVMEYQP 167
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+T+++N L+ + EA + + + GC P+ T+ T + LC G+ D A +
Sbjct: 168 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 227
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
K+ D +++ L K + +A + + K PNV+
Sbjct: 228 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 275
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D A++L EM + V + +L+ + K + L M+ + D+ +YN+
Sbjct: 46 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 105
Query: 245 ITNTYGGDPERLKEL--IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I N + + L + +M G +PD ++ + L+ YC + + EA + + +
Sbjct: 106 I-NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
PN TF T I+ L +A + V PD T +V GL K+ I A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 363 GVIRTIKK 370
+++ ++K
Sbjct: 225 SLLKKMEK 232
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 147/287 (51%), Gaps = 4/287 (1%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
+ ++ L++S K D I + Y N LI + G++ A + FD+M G ++FN
Sbjct: 237 WKEVVVLVDSMKED-GIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFN 295
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+LL ++R +++ + ++ + +P ++Y L+ ++ G ++ALEL EME
Sbjct: 296 SLLDVYGKARRHEEAIGVLKKM-ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEF 354
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPER 255
+G++ VTYTT+++ L + G + A +SEM + G ++ YN I + G
Sbjct: 355 RGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTE 414
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ + D++R AG PD +++N L+ + +N + E V++ +++ G P T+ + I
Sbjct: 415 MMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 474
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
G FD+A +++K + PD +T ++ L + + +A+
Sbjct: 475 SYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAE 521
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 148/332 (44%), Gaps = 39/332 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K I + +LI SY + G+FD AM + +M E G + ++NA+
Sbjct: 448 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAV 507
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R + + LF E+ + + PD++SY LL ++ ++ DK L ++ +
Sbjct: 508 LSALARGGRWVQAEKLFAEMEDR-DCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQR 566
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
+E T++ K + E E+ + E+ ++ LD+ N ++ YG
Sbjct: 567 IEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVS-IYGKNKMVKKV 625
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
GD E+ + ++ E++ +G++PD SYN ++
Sbjct: 626 EEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYA 685
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + M EA +++ ++ +G P+ T+ +I + F++A + + V P+
Sbjct: 686 YGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPN 745
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T ++EG + ++ EAK + + K +P
Sbjct: 746 ERTYNSILEGYCRHGRMVEAKSFLSNLPKIYP 777
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 2/199 (1%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA-EEAE 223
+PD +Y L+ +G A+ + M + GV+ VTY VL+ K +E
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L M++ G++LD YN I+ G ++ DEM+ AG +PD +++N L+ Y
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
K +EA V + +E GC+P+ T+ + I G ++A ++ +E PD
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361
Query: 343 NTVKLLVEGLVKKKKIKEA 361
T L+ GL + KI A
Sbjct: 362 VTYTTLISGLDRIGKIDAA 380
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 42/333 (12%)
Query: 77 RFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVI 133
R I+ + ++ + P LC LI+ +G G F M FD + G V+
Sbjct: 373 RIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVV 432
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++N LL ++ L +V +F E+ KK P++ +Y L+ S+ G D+A+E+
Sbjct: 433 TWNTLLAVFGQNGLDSEVSGVFKEM-KKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKR 491
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP 253
M G+ TY VL+ L + G +AE+L++EME + D +Y+ + + Y
Sbjct: 492 MIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYS-SLLHAYANAK 550
Query: 254 --ERLKELIDEMRDAGLKP-----------------------------------DTISYN 276
+++K L +++ ++P D N
Sbjct: 551 KLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLN 610
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+++ Y KN+M+ + ++V ++EN + +A T+ + ++ G+ +K + E
Sbjct: 611 AMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSS 670
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD + ++ +K ++KEA + +K
Sbjct: 671 GMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 703
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A ++ EL +V+ FN ++ C + L++ + K PD +Y +
Sbjct: 297 DEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSI 351
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A+ LL EME KG VTYT VL+ K G ++ L EM KG
Sbjct: 352 LMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG 411
Query: 234 VDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ L+ YN I G + LI EMR G PD SYN ++ C NE M+EA+
Sbjct: 412 LTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAE 471
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++E L E G N T+ T I+ L G + A ++ KE ++ D + L++ +
Sbjct: 472 HMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAM 531
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPN 375
K + + ++ + +K PN
Sbjct: 532 CKDGNVDRSLVLLEEMAEKGIKPN 555
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ S+ + GM+D ++M G + +N +++A + D+ L E+ +
Sbjct: 387 VLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQ 445
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD SY ++ C++ ++A + + +GV +TY T+++ L + G ++A
Sbjct: 446 GCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDA 505
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL EM G LDV +YN I G+ +R L++EM + G+KP+ +SYN L++
Sbjct: 506 VRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISE 565
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +A ++ + + G +P+ T+ T I LC G A + ++ + PD
Sbjct: 566 LCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPD 625
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L+ K + + +A
Sbjct: 626 IITYNILISWHCKVRLLDDA 645
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 7/265 (2%)
Query: 116 AMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ DQ+ G S S+N +L R+ + L+ + + + P ++G+
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
++ C G +++AL LL M G V Y TV++ L QG EA L +EM G
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241
Query: 235 DLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV ++ + G G L+D M G P ++Y FL+ C+ DEA+
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + E N F T I G +A ++++ + PD +T +L+ GL
Sbjct: 302 MLGRVPE----LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNVL 377
K +I A ++R ++KK F PNV+
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVV 382
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 9/272 (3%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A F +M G VIS+ +L+ RS ++K LF+E+ + D + +
Sbjct: 138 DEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD-VGIRSDVTTSSM 196
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G +A ELL M +G + VTY+T++ L + EA RL+ M+K G
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEM-RDAG-----LKPDTISYNFLMTCYCKNE 286
D AY + G+ +L EM D G KP ISY+ ++ CK+
Sbjct: 257 CRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDR 316
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
DEA+++++ ++ G P+ ++ T I+ C SG ++KA +F E + V PD T
Sbjct: 317 REDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSS 376
Query: 347 LLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+L++ L KK K+ EA ++ I++ P+V+
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVV 408
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 138/275 (50%), Gaps = 13/275 (4%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRS-----RLYDKVPILFDEIPKKYNLSPDKIS 170
A + F +M +LG +V++ L+ +S L +L D P N P+ IS
Sbjct: 426 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 485
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +++ C G D+A EL EM+ GV ++YT++++ + G ++A+ L++EM
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545
Query: 231 KKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
GV DV ++V I G EL++ M G P+T++Y L+ C N+ +
Sbjct: 546 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 605
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM------VHKIPDFN 343
EA +++ +++ GC P+ T+ T + LC +GN A ++ K+ + + PD
Sbjct: 606 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 665
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+ ++++GL K + EA+ + + +K PNV+
Sbjct: 666 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVI 700
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 23/302 (7%)
Query: 79 SDIETLIESHKNDPKITQEPYLCN----------LIRSYGQAGMFDHAMRTFDQMDELGT 128
+I+ +E HKN T PY N +I + G D A F +M LG
Sbjct: 456 GNIKIALELHKNMLSDT-SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 514
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
VIS+ +L+ RS + LF+E+ + PD ++ +L+ C G +A
Sbjct: 515 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD-IGVQPDVTTFSVLIDMLCKEGKVIEAN 573
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
ELL M +G TVTYTT++ L EA +L+ +M+K G DV Y +
Sbjct: 574 ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 633
Query: 248 TYGGDPERLKELIDEM-RDAG-----LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
G+ + EL +M D G KPD ISY+ ++ CK+ DEA+++++ ++
Sbjct: 634 CQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKAL 693
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIK 359
G PN ++ + I+ C SG + A +F E MV + N V +++ G K+ +I
Sbjct: 694 GVIPNVISYTSLIHGFCRSGKLEDAKHLFNE--MVDQGVQLNAVTYSVMIHGFCKEGQID 751
Query: 360 EA 361
+A
Sbjct: 752 KA 753
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 10/267 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + G A + M + G +++++ L+ C + R+ + + KK
Sbjct: 16 LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMS--MKK 73
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKAL----ELLNEMENKGVEV--TTVTYTTVLNCLYK 215
PD I+YG L+K C +G + AL E+LN+ G++ T V+Y+ +++ L K
Sbjct: 74 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCK 133
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTIS 274
+EA L+ EM+ +G+ DV +Y I G E+ K L +EM D G++ D +
Sbjct: 134 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTT 193
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ L+ CK + EA ++ E + + GC + T+ T I LC +A ++F
Sbjct: 194 SSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQ 253
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ PD L++GL + I A
Sbjct: 254 KLGCRPDAIAYGTLMKGLCQTGNINTA 280
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 13/278 (4%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
P +T L +++ G+ A + + + + G V++ L+ C + R+ K
Sbjct: 370 PDVTTSSVLIDMLCKKGKV---IEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRI-SK 425
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL----LNEMENKGVEV--TTV 204
LF ++ +K P+ ++ L+K C SG+ ALEL L++ G+ +
Sbjct: 426 ATQLFLKM-QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 484
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM 263
+Y+ +++ L K G +EA L+ EM+ GV DV +Y I G + K L +EM
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
D G++PD +++ L+ CK + EA ++ E + + GC PN T+ T + LC +
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+A ++F + + +PD T L++GL + IK A
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 642
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD + G+L+ C G +A ELL M +G + VTY+T++ L + EA
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-----TNTYGGDPERLKELIDEMRDAGLK--PDTISY 275
+L+ M+K G D AY + T +E++++ G+K P +SY
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
+ ++ CK+ DEA+++++ ++ G P+ ++ + I+ C SG ++KA +F E +
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V D T +L++ L K+ K+ EA ++ + ++
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR 220
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 10/312 (3%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ + L K +R + L + K + LI + +G ++ A F++M ++
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366
Query: 127 GTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G V + + L+ C + ++ + +L E+ + PD ++ L+K C
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLL--EVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA----ERLWSEMEKKGVDL--DVA 239
KA +L +M+ G VT T++ L + GN + A + + S+ G++ +
Sbjct: 425 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 484
Query: 240 AYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+Y++ I G + +EL EM+ G+ PD ISY L+ +C++ +AK ++ +
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+ G P+ TTF I LC G +A ++ + + IP+ T LV+GL +I
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604
Query: 359 KEAKGVIRTIKK 370
EA + ++K
Sbjct: 605 SEATQLFMKMQK 616
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M G++PD + L+ +CK + EA ++ E + + GC + T+ T I LC
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+A ++F + PD L++GL + KI A
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIA 99
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A F +M LG +VIS+ +L+ RS + LF+E+ +
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQ- 728
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKAL 188
+ + ++Y +++ C G DKAL
Sbjct: 729 GVQLNAVTYSVMIHGFCKEGQIDKAL 754
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 2/263 (0%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L++ Y G D M G +N L+ A + D+ ++F ++ +
Sbjct: 310 CTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM-R 368
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ L+PD ++YG ++ C SG + A+ +M ++G+ + Y ++++ L E
Sbjct: 369 QQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 428
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE L EM +G+ L+ +N I ++ G ++L D M G+KPD I+Y+ L+
Sbjct: 429 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 488
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC MDEA K+ G+ G PN T+RT I C A +FKE
Sbjct: 489 DGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVS 548
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
PD T ++++GL + ++ AK
Sbjct: 549 PDIITYNIILQGLFQTRRTAAAK 571
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA- 222
+SPD ++Y ++ + C + DKA+E+L M GV TYT++++ G +EA
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAI 286
Query: 223 ---ERLWSE-MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
+++ S+ +E G++ D+A Y + G + L+D M G+ PD YN
Sbjct: 287 GFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNI 346
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ Y K +DEA V+ + + G +P+A T+ I LC SG + A F++ +
Sbjct: 347 LICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 406
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
P L+ GL K + A+ +I
Sbjct: 407 LSPGNIVYNSLIHGLCTCNKWERAEELI 434
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 124/278 (44%), Gaps = 10/278 (3%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+ ++I S+ + G + + FD M +G +I+++ L+ C ++ + + +L
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 507
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ L P+ ++Y L+ +C AL L EME+ GV +TY +L L++
Sbjct: 508 V--SVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTR 565
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDTI 273
A+ L+ + + G ++++ YN+ + N D R+ + + M LK +
Sbjct: 566 RTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMD---LKLEAR 622
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
++N ++ K EAK ++ NG PN T+R ++ G G ++ ++F
Sbjct: 623 TFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 682
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D + +V L+++ +I A + I +K
Sbjct: 683 EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 720
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 133 ISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
I+F LL C R D + I+ + + + PD S +LLK CD S +ALEL
Sbjct: 123 ITFTPLLKGLCADKRTSDAMDIVLRRMTE-LSCMPDVFSCTILLKGLCDENRSQEALELP 181
Query: 192 NEMENK---GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ M + G V+YTTV+N +K+G++ +A +T
Sbjct: 182 HMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKA-----------------------YST 218
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
Y EM D + PD ++Y+ ++ CK + MD+A +V + +NG PN
Sbjct: 219 Y-----------HEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCR 267
Query: 309 TFRTWIYHLCGSGNFDKAY----KVFKESVMVHKI-PDFNTVKLLVEGLVKKKKI 358
T+ + ++ C SG +A KV + V + PD T L++G K +
Sbjct: 268 TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 88/213 (41%), Gaps = 9/213 (4%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA- 222
++P +Y +L+ C + D L + KG V +T+T +L L +A
Sbjct: 83 VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE------LIDEMRDAGLKPDTISYN 276
+ + M + DV + + + D R +E ++ + R G PD +SY
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLC--DENRSQEALELPHMMADGRGGGSAPDVVSYT 200
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ + K +A Y + + SP+ T+ + I LC DKA +V V
Sbjct: 201 TVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKN 260
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+P+ T ++ G + KEA G ++ ++
Sbjct: 261 GVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVR 293
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 106/267 (39%), Gaps = 40/267 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y AG D AM+ M +G + +++ L+ C SR+ D + +LF E+
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDAL-VLFKEMESS 545
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SPD I+Y ++L+ + + A EL + G ++ TY +L+ L K ++
Sbjct: 546 -GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 604
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-----------------------------------T 246
A R++ + + L+ +N+ I
Sbjct: 605 ALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAE 664
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
N G G E L +L M D G D+ NF++ + + A ++E S
Sbjct: 665 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 724
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKE 332
A+T +I L G G + + ++ E
Sbjct: 725 EASTASLFIDLLSG-GKYQEYHRFLPE 750
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 150/330 (45%), Gaps = 19/330 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL ++ + + P + + + LT +AK K +S + +L + + I + Y
Sbjct: 563 DDALSSFNRMLHMHPPPSTVDFTKLLT--SIAKMKHYSTVLSL-STQMDSFGIPPDVYTL 619
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI S+ +A ++ +LG V+++ L+ L I K
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG------------LCKMITK 667
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SPD +Y L+ + C+ LLNEM N + V ++TV++ L K+G
Sbjct: 668 --GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 725
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + M K+GV+ DV Y + + + + ++ D M G P+ SYN L+
Sbjct: 726 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 785
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC+ + MD+A + E + G + T+ T I+ LC G A +F E V +I
Sbjct: 786 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 845
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD T ++L++ L K + EA +++ I+
Sbjct: 846 PDLVTYRILLDYLCKNHHLAEAMVLLKAIE 875
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR G A+ FD+M G +V+++ L+ + R + +F E+ K
Sbjct: 121 LIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITK- 179
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ ++Y L+ C L+NEM + + T TV++ L K+G EA
Sbjct: 180 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 239
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M +GV+ +V YN + + + + ++ D M + ISYN L+
Sbjct: 240 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLING 299
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +D+A ++E + +PN T+ T I+ LC G A +F E V +IPD
Sbjct: 300 YCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 359
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T + L + L K + + +A +++ I+
Sbjct: 360 LVTYRTLSDYLCKNRHLDKAMALLKAIE 387
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS--PDKISYGLLLKSHC 179
QMD G P V + ++ + ++V F + K L PD ++ L++ C
Sbjct: 70 QMDSFGIPPDVYTLAIVINSLCH---LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 126
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G +AL L ++M +G + VTY T++N L K EA ++SEM KG+ ++
Sbjct: 127 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIV 186
Query: 240 AYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
YN I + + + L++EM D+ + PD + N ++ CK M+ EA V + +
Sbjct: 187 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 246
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKK 356
G PN T+ + C D A KVF MVHK + + + L+ G K +
Sbjct: 247 IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF--DTMVHKDCVANVISYNTLINGYCKIQ 304
Query: 357 KIKEAKGVIRTI-KKKFPPNVL 377
+ +A + + +++ PN +
Sbjct: 305 SVDKAMYLFEEMSRQELTPNTV 326
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 8/235 (3%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD M G +V S+N L+ + + DK L +++ + L D ++Y
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ-GLIADTVTYN 817
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C G A+ L +EM G VTY +L+ L K + EA L +E
Sbjct: 818 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 877
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+D D+ YN+ I G+ E ++L + GL+PD +YN ++ CK ++DEA
Sbjct: 878 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 937
Query: 292 KKVYEGLEENGCSPNATTFR---TWIYHLCGSGNFDKAYKV---FKESVMVHKIP 340
K++ ++EN N+T+ R + IY D Y + F++ + H P
Sbjct: 938 NKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEIDLVYSISVMFEKMFICHGCP 992
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 12/320 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +I+S + SP Y + L K + + TL+ + D KI + + N
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNS--LIHGLCKLCEWKHVTTLM-NEMVDSKIMPDVFTLN 224
Query: 103 -LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++ + + GM A D M G +V+++NAL+ C R+ + D +FD +
Sbjct: 225 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV-DVAVKVFDTMVH 283
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + + ISY L+ +C S DKA+ L EM + + TVTY T+++ L G +
Sbjct: 284 K-DCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
+A L+ EM +G D+ Y R + Y L + L+ + + PD Y
Sbjct: 343 DAISLFHEMVARGQIPDLVTY--RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 400
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C+ +++A+ ++ L G PN T+ I+ LC G +A K+F E
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 460
Query: 338 KIPDFNTVKLLVEGLVKKKK 357
P+ T L+ G ++ +
Sbjct: 461 CSPNDCTYNLITRGFLRNNE 480
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 9/268 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LCNL + H ++M +V+ F+ ++ A + + + D +
Sbjct: 683 LCNLCE-------WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 735
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ + PD ++Y L+ HC D+A+++ + M +KG +Y ++N +
Sbjct: 736 KR-GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 794
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
++A L +M +G+ D YN I + G + L EM +G PD ++Y L
Sbjct: 795 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 854
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CKN + EA + + +E + + + I +C +G + A +F
Sbjct: 855 LDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGL 914
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
PD T +++ GL K+ + EA + R
Sbjct: 915 QPDVRTYNIMIHGLCKRGLLDEANKLFR 942
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 125/264 (47%), Gaps = 5/264 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +M G +++++N+L+ + + V L +E+ + PD + ++
Sbjct: 169 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTVV 227
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G +A ++++ M ++GVE VTY +++ + + A +++ M K
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287
Query: 236 LDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+V +YN I N Y ++ L +EM L P+T++YN L+ C + +A
Sbjct: 288 ANVISYNTLI-NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + G P+ T+RT +LC + + DKA + K + PD +++G+
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNV 376
+ ++++A+ + + K PNV
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNV 430
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G A+ F +M G ++++ L ++R DK L I +
Sbjct: 331 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI-EGS 389
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N PD Y +L C +G + A +L + + +KG++ TY +++ L KQG EA
Sbjct: 390 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 449
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLMT 280
+L+SEM K G + YN+ IT + + E L+ EL++EM G D +S L+
Sbjct: 450 SKLFSEMNKNGCSPNDCTYNL-ITRGFLRNNEALRTIELLEEMLARGFSVD-VSTTTLLV 507
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
++ +D++ K + P+ T R+
Sbjct: 508 GMLSDDGLDQSVKQILCKPSSSSRPSGTQMRS 539
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 155/333 (46%), Gaps = 7/333 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KALD++ + + SP Y + ++ L K+ R + + D +L
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTE--LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY-DKVPILFDEIPK 160
NL+ G+ G + F +M +V+S+N ++ A S+ + +V FD++ K
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM-K 401
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++SP + +Y +L+ +C + +KAL LL EM+ KG Y +++N L K E
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 461
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
A L+ E+++ ++ Y V I + +G G +L +EM++ G PD +YN L
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKH-FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M+ K M++EA + +EENGC + + + +G +A ++F+
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T L+ +EA ++R +K K
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSK-RFSDIETLIESHKNDPKITQEPYLCNLI 104
+++S + +P Y + ++ L +SK S++ + + K D E LI
Sbjct: 359 NVFSEMGMWRCTPTVVSY--NTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILI 416
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
Y + + A+ ++MDE G P ++ +L+ A +++ Y+ LF E+ + +
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGN 476
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
++ Y +++K G +A++L NEM+N+G Y +++ + K G EA
Sbjct: 477 VSSRV-YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L +ME+ G D+ ++N+ I N + G P R E+ + ++ +G+KPD ++YN L+ C+
Sbjct: 536 LLRKMEENGCRADINSHNI-ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCF 594
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
M +EA ++ +++ G +A T+ + L GN D
Sbjct: 595 AHAGMFEEAARMMREMKDKGFEYDAITYSSI---LDAVGNVD 633
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 149/318 (46%), Gaps = 20/318 (6%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEP-YLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R L +++ + ++ I+ + ++ P L L+++ G+A M A+ F Q
Sbjct: 133 IRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRK 192
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++N+++ + ++KV ++ E+ + + PD I+Y L+ S+ G +D A
Sbjct: 193 CKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSA 252
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L +EM++ ++ T YTT+L +K G E+A L+ EM++ G V Y I
Sbjct: 253 IRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG 312
Query: 248 TYGGDPERLKELI----DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G R+ E D +RD GL PD + N LM K ++E V+ + C
Sbjct: 313 L--GKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI------PDFNTVKLLVEGLVKKKK 357
+P ++ T I L F+ V + S K+ P T +L++G K +
Sbjct: 370 TPTVVSYNTVIKAL-----FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 358 IKEAKGVIRTIKKK-FPP 374
+++A ++ + +K FPP
Sbjct: 425 VEKALLLLEEMDEKGFPP 442
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL + + + P + Y + L K+KR+ L + K +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCS--LINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ +G+ G A+ F++M G+ V ++NAL+ ++ + ++ L ++ +
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
D S+ ++L +G +A+E+ +++ G++ VTY T+L C G EE
Sbjct: 544 -GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A R+ EM+ KG + D Y+
Sbjct: 603 AARMMREMKDKGFEYDAITYS 623
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++ L+ +RLY ++ E+ + +S L+K+ + KAL + +
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYG-G 251
+ + + T+ TY +V+ L ++G E+ +++EM +G D Y+ I++ G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ L DEM+D ++P Y L+ Y K +++A ++E ++ GCSP T+
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
I L +G D+AY +K+ + PD + L+ L K +++E V
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 3/172 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ A +++ + +++ + S YA + ++ K + S+ L KN
Sbjct: 461 EAANELFKELKENFGNVSSRVYA--VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ +AGM + A +M+E G + S N +L R+ + + +F+ I K
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-KH 577
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ PD ++Y LL +G ++A ++ EM++KG E +TY+++L+ +
Sbjct: 578 SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + G R + M +V+S+N LL C R ++ ++ D I +
Sbjct: 16 LVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRG 75
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD ++Y LL +C +G +++ ELL E+ ++G+ + YT V+ L K E
Sbjct: 76 GRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGE 135
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L EM + G + +N I+ + E L+ +M +G+K D ++YN LM
Sbjct: 136 ALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMD 195
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA+++ E ++ +GC+P+ + +++Y LC SG A++V ++ H P
Sbjct: 196 GLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDP 255
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ T +++GL K KI A
Sbjct: 256 NVVTYNTILDGLCKSGKIDTA 276
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 129/275 (46%), Gaps = 10/275 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ +AG A + ++M G V+++++ ++ C ++ D +L E +
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL--EQMRD 250
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ ++Y +L C SG D ALE++ +M + G + V Y+TV++ L K G +
Sbjct: 251 SHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA + M + G DV Y+ + G E E + EM G KP+ ++Y L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370
Query: 280 TCYCKNEMMDEAKKVYEGLEENG-----CSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
C + EA+++ E + G C P+ +T+ I LC +G D A K F+
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD + +VEGL + + +A+ ++ ++
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+M G V+++N L+ C RL + +L E K +PD ++Y +
Sbjct: 175 LQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL--ERMKASGCAPDVVAYSSFVYGL 232
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK-GVDLD 237
C SG A ++L +M + + VTY T+L+ L K G + A + +M G L+
Sbjct: 233 CKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLN 292
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
V Y+ + G + + +++ M AG +PD ++Y+ L+ CK ++EA +
Sbjct: 293 VVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVR 352
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-----PDFNTVKLLVEG 351
+ GC PNA T+ + ++ LC G +A ++ +E P +T L+ G
Sbjct: 353 EMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGG 412
Query: 352 LVKKKKIKEA 361
L K +I +A
Sbjct: 413 LCKAGRIDDA 422
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 9/223 (4%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P I++ L+ C + + A LL +M GV+ VTY T+++ L K G +
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQ 204
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYN 276
EAE+L M+ G DV AY+ + YG G +++++MRD+ P+ ++YN
Sbjct: 205 EAEQLLERMKASGCAPDVVAYS---SFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261
Query: 277 FLMTCYCKNEMMDEAKKVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
++ CK+ +D A ++ E + +GC N + T + LC G +A V +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
PD T LV GL K KI+EA +R + + PN +
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 9/262 (3%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++I+FN L+ C R + + L ++ + D ++Y L+ C +G
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS-GVKADVVTYNTLMDGLCKAG 201
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+A +LL M+ G V Y++ + L K G +A ++ +M D +V YN
Sbjct: 202 RLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYN 261
Query: 243 VRITN-TYGGDPERLKELIDEMRDA-GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+ G + E++++M + G + + Y+ ++ CK EA+ V E +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
GC P+ T+ + + LC +G ++A + +E M P+ T LV GL ++ E
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAE 381
Query: 361 AKGVIRTI------KKKFPPNV 376
A+ ++ + PP+V
Sbjct: 382 AERMVEEMSSGGGGGHHCPPSV 403
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
MD G P + ++FNAL+ ++ L + + + ++ P+ +SY LL+ C
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLE 59
Query: 183 SSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+A EL+ +M ++G T VTY+T+L+ K G EE+
Sbjct: 60 RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEES------------------ 101
Query: 241 YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
+EL+ E+ GL+PD + Y ++ CK+ + EA ++ E +
Sbjct: 102 ----------------RELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIR 145
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
GC P TF T I C N + A + ++ D T L++GL K +++E
Sbjct: 146 AGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQE 205
Query: 361 AKGVIRTIKKK-FPPNVL 377
A+ ++ +K P+V+
Sbjct: 206 AEQLLERMKASGCAPDVV 223
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK---VPILFDE 157
+L+ +AG + A+ +M G + +++ +L+ C+ RL + V +
Sbjct: 333 SLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSG 392
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
++ P +Y L+ C +G D AL+ M ++G + V+Y+T++ L + G
Sbjct: 393 GGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Query: 218 NAEEAERLWSEM 229
A +AE + SE+
Sbjct: 453 RALQAEMILSEV 464
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 177/421 (42%), Gaps = 69/421 (16%)
Query: 24 SSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIET 83
+ I S +LR+E D A + + S++ A ++ + + +L + ++
Sbjct: 42 TPIKESDVVMRLRTETDIVLASNYFRSIANSKAFQ-HTQLTYQIMIEKLGRECDVDGVQY 100
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
L++ K + E N+I +Y + G+ + A++ F ++ E G +V +N LL A
Sbjct: 101 LLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAML 160
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+ + ++ + K+ P+ +Y +LLK+ C + D A +LL EM NKG E
Sbjct: 161 SENRFQMIEPIYSNM-KRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDV 219
Query: 204 VTYTTVLNCLYKQGNAEEAER------------------------------LWSEMEKKG 233
V+YTTV++ + K G EEA L +M +KG
Sbjct: 220 VSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKG 279
Query: 234 VDLDVAAYNVRITNTYG-GDPE--------------------------------RLKELI 260
+D +V Y+ I++ G G+ E R+ E +
Sbjct: 280 IDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEAL 339
Query: 261 ---DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+ M + G +P+ ++YN L+ C + M EA V +E NGCSPN +T+ I
Sbjct: 340 NIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGF 399
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
+G+ A +++ + + IP+ +V L + +A +I + PPN
Sbjct: 400 AKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNT 459
Query: 377 L 377
+
Sbjct: 460 V 460
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 1/208 (0%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
SP+ ++ L+K + G +AL + N M +G E V Y T+++ L G EA
Sbjct: 316 SPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVS 375
Query: 225 LWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+ S+ME+ G +V+ Y I GD E+ ++M G P+ + Y ++ C
Sbjct: 376 VSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLC 435
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
++ M +A + E + + C PN TF T+I LC SG + A +F + P+
Sbjct: 436 RSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIK 495
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T +++GL+K+ +IKEA ++ +++K
Sbjct: 496 TYNEVLDGLLKENRIKEALELVTEMEEK 523
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG A +++M G +V+ + +++ RS ++ + L +++
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTD- 453
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N P+ +++ +K C SG + A+ L +ME G TY VL+ L K+ +EA
Sbjct: 454 NCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEA 513
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +EME+KG++L++ YN G E +L+ +M G+KPD I+YN L
Sbjct: 514 LELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYA 573
Query: 282 YCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKA 326
YC + A ++ + L G P + + ++ +C ++A
Sbjct: 574 YCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEA 619
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 115/264 (43%), Gaps = 10/264 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L++ Y G A+ +++M E G +V+++N L+ C+ ++ + V + ++
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSV--SSKMER 382
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ +YG L+ +G A E+ N+M G V YT+++N L + +
Sbjct: 383 NGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQ 442
Query: 222 AERLWSEMEKKGVD---LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
A WS +EK D + +N I G E L +M G P+ +YN
Sbjct: 443 A---WSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ K + EA ++ +EE G N T+ T C G F++A K+ + ++
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEA 361
PD T L + K+K A
Sbjct: 560 VKPDAITYNTLTYAYCMQGKVKTA 583
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 35/216 (16%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L +S FS +LIE D I+ +G + A+ F QM++ G
Sbjct: 431 VNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGC 490
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKK--------YN----------------- 163
++ ++N +L + + L E+ +K YN
Sbjct: 491 SPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALK 550
Query: 164 ---------LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT-YTTVLNCL 213
+ PD I+Y L ++C G A++LL+++ G V V YT++L +
Sbjct: 551 LLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGI 610
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
Q EEA +M +G+ L+ A +N + +
Sbjct: 611 CNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLF 646
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 37/288 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A D+M + G ++ ++N+L+ A + D+ + EI +K
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK- 390
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD I+Y +L+ +C ++ KA L +EM G++ T TYT++L+ L K+ +EA
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI------TNTYG-------------------------- 250
+ L+ ++ +GV D +N I +N G
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510
Query: 251 ----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E +EL DEM+ G+KPD IS+N L++ Y + + +A +V + + G +P
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
T+ + LC + D A ++ KE V PD T L+EG+ K
Sbjct: 571 VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 12/318 (3%)
Query: 60 SSRYAQDLTVRRLAKS---KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
SS Y ++ + L K K+ D +E+ P I ++ Y +G + A
Sbjct: 219 SSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT---YNTIVHGYCSSGRVEAA 275
Query: 117 MRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
M ++ +L+ C + RL + I F+E+ +K L P + Y L+
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI-FEEMVQK-GLRPSAVIYNTLI 333
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C+ G+ D A +EM KG+ T TY ++++ L+ + +EAE + E+++KG+
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 236 LDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D YN+ I N Y + ++ L DEM +G+KP +Y L+ K M EA
Sbjct: 394 PDAITYNILI-NGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+++ + G P+A F I C + N A+++ K+ + PD T +++G
Sbjct: 453 LFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512
Query: 354 KKKKIKEAKGVIRTIKKK 371
++ K++EA+ + +K++
Sbjct: 513 REGKVEEARELFDEMKRR 530
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 166/395 (42%), Gaps = 73/395 (18%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLI 85
S+S ++ L S P ++ S ++ H+ S+R +Q ++++ S S I +TL+
Sbjct: 19 SISLQQTPLES---PVSTTNLASPLTPHFLEQ-SARSSQWHFIKQVESSLTPSLISQTLL 74
Query: 86 ESHKNDP-----------KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
H++ K++ LC I + A+ Q GT S+
Sbjct: 75 NLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIRE 134
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
L A +R RL K I+FD L+KS CD +D+A E M
Sbjct: 135 IFEFL-AASRDRLGFKSSIVFD----------------YLIKSCCDMNRADEAFECFYTM 177
Query: 195 ENKGV-----------------------------------EVTTVTYTTVLNCLYKQGNA 219
+ KGV + + T+ ++N L K+G
Sbjct: 178 KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL 237
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNF 277
++A+ ME GV ++ YN I + Y G E ++ M+ ++PD+ +Y
Sbjct: 238 KKAKDFVGHMETSGVKPNIVTYNT-IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L++ CK ++EA K++E + + G P+A + T I C GN D A +K+ ++
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA-SAYKDEMLKK 355
Query: 338 KI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I P +T L+ L +++ EA+ +I+ I++K
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK 390
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
F ++ G I FNAL+ C+ S + +L D + + PD++++ +++ H
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM--DRMKVPPDEVTFNTIMQGH 511
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G ++A EL +EM+ +G++ +++ T+++ ++G+ ++A R+ +EM G + V
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571
Query: 239 AAYNVRITNTYGGDPERL-KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
YN + L +EL+ EM G+ PD +Y L+ K + DE K
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKK 161
+++ + + G + A FD+M G ISFN L+ +R + D + + +
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+N P ++Y L++ C + D A ELL EM +KG+ TY T++ + K +E
Sbjct: 567 FN--PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G+ A F++ G +V+++N ++ + + L+D++ +
Sbjct: 36 LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHF 95
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++Y L+ C DK +LL EM +G VTY T++N L QG ++EA
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMR--DAGLKPDTISYNFLM 279
L +M G ++ + + I G+ E ++DEM ++GL PD I++N ++
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + + +A V++ E GC PN T+ T I L D+A ++ + V +
Sbjct: 216 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 275
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ T +V+GL+K ++++A V+R ++
Sbjct: 276 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 46/311 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQM--DELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
+I+ + G + A R D+M E G VI+FN++L C R+ D + +
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ P+ ++Y L+ D+AL+LL +M G TVTY+TV++ L K G
Sbjct: 237 R--GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 294
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
E+A + +M G D YN I + +RL+E L+ EM +AG P ++Y
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFF--KRQRLREAVGLLREMLEAGFHPSVVTYT 352
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT------------------------ 312
L C++ DEA ++ + + GC+PNA T+ +
Sbjct: 353 TLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARD 412
Query: 313 ------------WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
I LC +G D+AY+ + + +IPD T +L+ GL +I
Sbjct: 413 EVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDT 472
Query: 361 AKGVIRTIKKK 371
+ R + ++
Sbjct: 473 GLELFRGMAER 483
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYDKVPILFDEIPKKYNLSPD 167
+ G + A+ QM + G +++N L+ R RL + V +L + + ++ P
Sbjct: 290 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH--PS 347
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
++Y L C SG D+A+E+L+ M +G +TY+++++ L K G EA +
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407
Query: 228 EMEK-KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
+M + + V V AY+ I G + E ++ M AG PD ++++ L+ C
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+D +++ G+ E GC P+ T+ T + LC + D+A+ +F++ PD +T
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTR 527
Query: 346 KLLVEGLVKKKKIKEAK 362
+ ++ GL++ + ++AK
Sbjct: 528 RTMIHGLLEVNRDEDAK 544
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 4/280 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
L+ + G A +QM G P +I+F ++ C + ++ +
Sbjct: 141 TLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMI 200
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ LSPD I++ +L C A + +G VTY+T+++ L K +
Sbjct: 201 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 260
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA +L ++M + G + Y+ + G E ++ +MRDAG PD ++YN L+
Sbjct: 261 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 320
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K + + EA + + E G P+ T+ T + LC SG FD+A ++
Sbjct: 321 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA 380
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNVL 377
P+ T +V+GL K ++ EA G + + P+V+
Sbjct: 381 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 5/209 (2%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ C S DKA+ L +M +K + VTY +++ L KQ +EA L+ E KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMR-DAGLKPDTISYNFLMTCYCKNEMMDEA 291
V YN I G E L D+M G +P ++Y+ L+ C++ +D+
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K+ E + GC+PNA T+ T + L G G +A+ + ++ P+ T L+++G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 352 LVKKKKIKEAKGVIR---TIKKKFPPNVL 377
L K+ +I+ A V+ I+ P+V+
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVI 209
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 111/252 (44%), Gaps = 3/252 (1%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V L K R D ++ ++ + LI + + A+ +M E G
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
SV+++ L RS +D+ + D + + +P+ I+Y ++ C +G +A
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSSIVDGLCKAGRVTEA 402
Query: 188 LELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
L +M ++ V + Y+ +++ L K G +EA M + G DV +++ I
Sbjct: 403 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILIN 462
Query: 247 NTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + EL M + G PD ++Y L+ C+ +DEA +++ + +G SP
Sbjct: 463 GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522
Query: 306 NATTFRTWIYHL 317
+ +T RT I+ L
Sbjct: 523 DRSTRRTMIHGL 534
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 155/362 (42%), Gaps = 48/362 (13%)
Query: 41 PDKALDIYSSVSKHYASPVSSRYAQDL-----TVRRLAKSKRFSDIETLIESHKNDPKIT 95
PD AL ++ K +Y +L ++ LA + +++++ + +
Sbjct: 77 PDLALKFFTWAGKQ------KKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLM 130
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
+LI+S+G GM + + + M E G S+ ++N LL S + +
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE-------------------------- 189
E+ + + PD ++Y ++K +C G + KA E
Sbjct: 191 -EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYA 249
Query: 190 ---------LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
L +EM+ G+E+ Y+ V+ L K+G E ++ +M +KG ++VA
Sbjct: 250 EGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAI 309
Query: 241 YNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
Y I +N G+ L + M+ GL+PD ++Y ++ C CK+ +DEA + E
Sbjct: 310 YTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCR 369
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
NG + NA + + I L +G +A K+F+E V PD L++ L K K
Sbjct: 370 VNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTD 429
Query: 360 EA 361
EA
Sbjct: 430 EA 431
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 3/244 (1%)
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
F++M + G +V + AL+ + + + +LF+ + KK L PD ++YG+++
Sbjct: 294 VFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERM-KKEGLEPDVVTYGVVVNCM 352
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C SG D+A+E L GV V + Y+++++ L K G EAE+L+ EM KKG D
Sbjct: 353 CKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDS 412
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN I G + M D G +Y ++ + +EA K+++
Sbjct: 413 YCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDM 472
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ + G +P A FR LC SG +A K+ E + IP+ + ++ L K +
Sbjct: 473 MIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE-TAFEDMLNVLCKAGR 531
Query: 358 IKEA 361
IKEA
Sbjct: 532 IKEA 535
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 119/295 (40%), Gaps = 40/295 (13%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+ ++ + K P Y + V + KS R + +E + + +
Sbjct: 325 EAMLLFERMKKEGLEPDVVTYG--VVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSS 382
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G+AG A + F++M + G P
Sbjct: 383 LIDGLGKAGRVHEAEKLFEEMVKKGCP--------------------------------- 409
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD Y L+ + G +D+AL ME++G + T TYT ++N L+++ EEA
Sbjct: 410 ---PDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEA 466
Query: 223 ERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++W M KG+ AA+ + I G R +L+DE+ G+ P+T ++ ++
Sbjct: 467 LKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPET-AFEDMLNV 525
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
CK + EA K+ +G + G I L +GN D A K+ + +
Sbjct: 526 LCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGI 580
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 9/196 (4%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G D + + G + +++ G EE +W M++ GV+ +
Sbjct: 110 NGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFT 169
Query: 241 YNV----RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
YN + + + ER+ E+ M + + PD ++YN ++ YC+ +A + +
Sbjct: 170 YNFLLNGLVNSVFIESAERVLEV---MENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFR 226
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-SVMVHKIPDFNTVKLLVEGLVKK 355
+E +P+ T+ T I G+FD ++ E +IP + L++ GL K+
Sbjct: 227 DMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPP-HAYSLVIGGLCKE 285
Query: 356 KKIKEAKGVIRTIKKK 371
K E V + +K
Sbjct: 286 GKCVEGYAVFEKMIQK 301
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + + A+ D+M E+G ++++NA++ + +++ + F EI +K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y L+ C+S A LL++M K + +TY+ +L+ K G E
Sbjct: 220 -GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ L+ EM + +D D+ Y+ I D + ++ D M G D +SYN L+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK + +++ K++ + + G N T+ T I +G+ DKA + F + P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T +L+ GL ++++A + ++K+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 8/312 (2%)
Query: 64 AQDLTVRRLAKSKRFSDIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
A + + L K+KR +D IE P + L N + + A R
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN---GLCNSSRWSDAARLL 248
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
M + +VI+++ALL A ++ + LF+E+ + ++ PD ++Y L+ C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSIDPDIVTYSSLINGLCL 307
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
D+A ++ + M +KG V+Y T++N K E+ +L+ EM ++G+ +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 241 YNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YN I + GD ++ +E +M G+ PD +YN L+ C N +++A ++E ++
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ + T+ T I +C +G ++A+ +F + PD T ++ GL K +
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 360 EAKGVIRTIKKK 371
E + + +K++
Sbjct: 488 EVEALYTKMKQE 499
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD 149
DP I L N + + + D A + FD M G V+S+N L+ C R+ D
Sbjct: 292 DPDIVTYSSLINGLCLHDR---IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ LF E+ ++ L + ++Y L++ +G DKA E ++M+ G+ TY +
Sbjct: 349 GMK-LFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGL 268
L L G E+A ++ +M+K+ +DLD+ Y I G E L + GL
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVY-----EGLEENGCS 304
KPD ++Y +M+ C ++ E + +Y EGL +N C+
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 118/279 (42%), Gaps = 41/279 (14%)
Query: 131 SVISFNALLFACTRSRLYDKVPIL---------------FDEIPK--------------- 160
S++ FN LL A + + YD V L F+ +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 161 ----KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
K PD+++ G L+ C A+ L+++M G + V Y +++ L K
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDT 272
+A + E+E+KG+ +V Y + ++ D R L+ +M + P+
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR---LLSDMIKKKITPNV 260
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
I+Y+ L+ + KN + EAK+++E + P+ T+ + I LC D+A ++F
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + D + L+ G K K++++ + R + ++
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + + LL + D + L +ME G+ T+ V+NC A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMT 280
+M K G + D V I + G R + L+D+M + G KPD ++YN ++
Sbjct: 143 LGKMLKLGYEPD----RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + +++A ++ +E G PN T+ + LC S + A ++ + + P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK K+ EAK + ++ P+++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 138/284 (48%), Gaps = 7/284 (2%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y A+ DQM E+G I+F L+
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + ++ P+ ++YG+++ C G D A LLN+ME +E V + T+
Sbjct: 133 EAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYGGDPERLKELIDEMRDAG 267
++ L K + ++A L+ EME KG+ +V Y+ I+ +YG + +L+ +M +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA-SQLLSDMIEKK 250
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
+ P+ +++N L+ + K EA+K+++ + + P+ T+ + I C DKA
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++F+ V PD +T L++G K K++++ + R + +
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A ++M+ V+ FN ++ + + R D LF E+ K + P+ ++
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVT 222
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ C G A +LL++M K + VT+ +++ K+G EAE+L +M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
K+ +D D+ YN I D ++ K++ + M PD +YN L+ +CK++ ++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+ +++ + G + T+ T I L G+ D A KVFK+ V PD T +L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 350 EGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPAVGDG 398
+GL K+++A V ++K + + + E G+ A V DG
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE--GMCKAGKVDDG 449
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 8/331 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL+++ + P Y+ ++ L R+SD L+ S + KI
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISC--LCSYGRWSDASQLL-SDMIEKKINPNLVTF 258
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI ++ + G F A + D M + + ++N+L+ C RL DK +F+ +
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL-DKAKQMFEFMV 317
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + PD +Y L+K C S + EL EM ++G+ TVTYTT++ L+ G+
Sbjct: 318 SK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A++++ +M GV D+ Y++ + G E+ E+ D M+ + +K D Y +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 436
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +D+ ++ L G PN T+ T I LC +AY + K+
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+PD T L+ ++ + +IR ++
Sbjct: 497 LPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 132/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M LG ++ ++N L+ C RS++ + +L +
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P ++ LL +C A+ L+++M G T+T+TT+++ L+ A E
Sbjct: 76 Y--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M ++G ++ Y V + GD + L+++M A ++ D + +N ++
Sbjct: 134 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 193
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D+A +++ +E G PN T+ + I LC G + A ++ + + P
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 253
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K EA+ + IK+ P++
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 134/283 (47%), Gaps = 5/283 (1%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P + L + + SYG+ + A + M E ++++FNAL+ A + + +
Sbjct: 218 PNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
L D++ K+ ++ PD +Y L+ C DKA ++ M +K TY T++
Sbjct: 275 EKLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
K E+ L+ EM +G+ D Y I + GD + +++ +M G+ P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++Y+ L+ C N +++A +V++ ++++ + + T I +C +G D + +F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+ P+ T ++ GL K+ ++EA +++ +K+ P
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 496
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 2/214 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + LL + D + L +M+ G+ TY ++NC ++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M K G + + + + +G L+D+M + G +PDTI++ L+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ EA + + + + GC PN T+ + LC G+ D A+ + + D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+++ L K + + +A + + ++ K PNV+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 3/260 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D AM+ FD M E +V + +LL A R+R D LF E+ ++ P +YGL
Sbjct: 166 DDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQR-GYGPSASTYGL 224
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE-MEKK 232
LL+ C+ G S A ++ + M ++G TY +++ G EA+ L+ E +E +
Sbjct: 225 LLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGE 284
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
LD YNV I E E+ M D G P +YN L+ + K +D+A
Sbjct: 285 KAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKA 344
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+++ +EE G SPN + T+I LC G ++A++ F++SV +PD T L+ G
Sbjct: 345 LQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRG 404
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
L ++ EA + R + ++
Sbjct: 405 LFGANRMDEAHRLYREMGER 424
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 5/221 (2%)
Query: 134 SFNALLFACTRSRLYDKV-PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
S+N L+ T+ D+ +L + + Y+ PD ++ GLL+ C+ + EL
Sbjct: 12 SYNLLVRGLTKLSSVDQARAMLSTMVGEGYD--PDVVTCGLLVDKFCEMKRVGEVCELFQ 69
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GG 251
E+E+ GV V + Y +L L G+ + + G V AY + G
Sbjct: 70 ELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTG 129
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E++ EM + PD ++Y L++ CK+ D+A KV++ + E PN +
Sbjct: 130 KTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYT 188
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + C + D AY++F E + P +T LL+ L
Sbjct: 189 SLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCL 229
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LCN RSY A +MR+ + + T + +L++ C + + +LF E+
Sbjct: 229 LCNGGRSY-LAYDIHSSMRSRGHVPDENT------YASLIYGCCMAGRITEAKVLFKEVL 281
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ D Y +L++ C + ++ALE+ M +KG T TY ++ +K
Sbjct: 282 EGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEV 341
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
++A +L+ ME+KG + Y+ I G E + + G PD ++YN L
Sbjct: 342 DKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNAL 401
Query: 279 MTCYCKNEMMDEAKKVYEGLEENG 302
+ MDEA ++Y + E G
Sbjct: 402 IRGLFGANRMDEAHRLYREMGERG 425
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN- 102
A DI+SS+ P + YA + + R ++ + L + K + + N
Sbjct: 238 AYDIHSSMRSRGHVPDENTYAS--LIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNV 295
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +A + A+ M + G ++ ++NAL+ ++ DK LF + +K
Sbjct: 296 LIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEK- 354
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ + Y + C G ++A E + +G VTY ++ L+ +EA
Sbjct: 355 GFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEA 414
Query: 223 ERLWSEMEKKG 233
RL+ EM ++G
Sbjct: 415 HRLYREMGERG 425
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M + GV D +YN+ + T ++ + ++ M G PD ++ L+ +C+ +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ E ++++ LE NG + + + L SG+FD +K +V +P K
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
+++ L+K K +EA V+ + KK P+
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSVPD 148
>gi|18087879|gb|AAL59033.1|AC087182_16 hypothetical protein [Oryza sativa Japonica Group]
gi|31432747|gb|AAP54340.1| expressed protein [Oryza sativa Japonica Group]
Length = 428
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 161/379 (42%), Gaps = 28/379 (7%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASP------VSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
+R E DP + I+S V+ + P SR L RLA+ +R D+ +
Sbjct: 56 VRGEADPAR---IHSLVATALSRPDDYPRLHGSRPLFSLAASRLARLRR-PDLAASLLRA 111
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
D L I + D A+R F D RS +S +ALL A R+
Sbjct: 112 LLDSAPASPGLLARAISLFPGP---DDALRAFS--DSAPAARSDVSLSALLSALFRAGRV 166
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVT 205
D V + ++P + S+ +LL + + A +LL EM K V+
Sbjct: 167 DDVKSTLASAETSFGVAPGRASHNVLLHALVKNSELAAARKLLGEMAKKLKHRPAPDIVS 226
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMR 264
Y TVL QG+ E E+L E+ K ++ +V YN RI G+ + +EL+D M
Sbjct: 227 YNTVLAGYSAQGDEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAME 286
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVY---------EGLEENGCSPNATTFRTWIY 315
+ P+ ++YN L+ YCK + A +V+ EG + G S ++ T+
Sbjct: 287 SKDVAPNYLTYNALVQGYCKEGNVGSAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVLFR 346
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
L D A + K + P F VK LVEGLVK K EAK V+ + +
Sbjct: 347 SLVEKERLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKGGKSAEAKDVVAKMNLLVKGD 406
Query: 376 VLRAWKKVEEELGLVPAPA 394
AW+K+ EL L P+
Sbjct: 407 AKVAWEKIAGELSLEGTPS 425
>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
Length = 845
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 34/346 (9%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
D+ V RL R D L+ + LI +Y + G+ + A + M++
Sbjct: 394 DMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNK 453
Query: 126 LGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSP------------------ 166
LG S +FN L+ C + RL + +L + K Y LS
Sbjct: 454 LGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGA 513
Query: 167 --------------DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
D I++ + C ++A + EM ++G+ +TY ++++
Sbjct: 514 LKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISA 573
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L K GN EA +L M + G+ D+ N+ I G + + L+ +M GL PD
Sbjct: 574 LCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPD 633
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
T++YN ++ YC+ + M+ A + GC P+ T+ W++ LC + ++A K+
Sbjct: 634 TVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLD 693
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
E V V P+ T L++G+ + R IK F PN +
Sbjct: 694 ELVAVDCSPNSVTYNTLMDGICSDVLDRAMILTGRLIKMAFKPNTI 739
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 124/290 (42%), Gaps = 36/290 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A F++M G S+ +FNA+L C R + +L I K ++PD SY +L
Sbjct: 202 AWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLL--GIMGKSGIAPDVCSYNIL 259
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+K HC G S A ++ M G E T VTY +++ L +G EA RL+ EM + G+
Sbjct: 260 IKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGI 319
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF---------------- 277
++ +NV I G ++ EM+ GL PD+ ++N
Sbjct: 320 QVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVH 379
Query: 278 ---------------LMTC-YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
++ C C + +D+A ++ G E G T F I G
Sbjct: 380 DHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEG 439
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++A ++++ + P +T L+ GL + ++ EA+ ++ + K
Sbjct: 440 LHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 489
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 138/322 (42%), Gaps = 43/322 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-L 100
++A ++Y ++K +P SS + + + L R + + L+E + + +
Sbjct: 442 EEASELYRIMNKLGLAPSSSTF--NYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTI 499
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C + +Y + G A++ +D M +G I+F+A + R ++ F E+
Sbjct: 500 C--LDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTS 557
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + P+ I+Y ++ + C +G+ +AL+L+ M G+ T +++ L ++G +
Sbjct: 558 R-GIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLK 616
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ L +M G+ D YN I N Y D +++M AG +PD +YN
Sbjct: 617 MVDNLLLDMCSNGLTPDTVTYNT-IINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIW 675
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT-------------------------- 312
M C+N M+++A K+ + L CSPN+ T+ T
Sbjct: 676 MHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSDVLDRAMILTGRLIKMAFK 735
Query: 313 --------WIYHLCGSGNFDKA 326
++ H C G ++A
Sbjct: 736 PNTITLNVFLSHFCKQGFGNRA 757
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L L + +G + +AL++L + G + + +L L++ G A ++ EM +
Sbjct: 153 LALHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAE 212
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G +A +N + + G L+ M +G+ PD SYN L+ +C +A
Sbjct: 213 GPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDA 272
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K++EG+ +GC P T+ + LC G +A ++F E V + T +L++G
Sbjct: 273 FKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDG 332
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
K ++ +A R ++ +
Sbjct: 333 YAKSGQMDQASAAYREMQAR 352
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
SG A + EM +G + T+ +L +G A L M K G+ DV +
Sbjct: 196 SGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCS 255
Query: 241 YNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
YN+ I +G + K + + M +G +P ++YN L+ C M EA+++++ +
Sbjct: 256 YNILIKGHCVFGWSRDAFK-MFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+ G N TF I SG D+A ++E +PD T ++
Sbjct: 315 AQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNII 364
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 114/293 (38%), Gaps = 35/293 (11%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G A R FD+M ++G + I+FN L+ +S D+ + E+ + L PD +
Sbjct: 302 GRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQAR-GLVPDSCT 360
Query: 171 YGL-------------------LLKSH-------------CDSGSSDKALELLNEMENKG 198
+ + + SH C D A ELL +G
Sbjct: 361 FNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQG 420
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLK 257
V + + ++ K+G EEA L+ M K G+ + +N I G + +
Sbjct: 421 VPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQ 480
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L++ M G T S+ + Y ++ A K ++ + G + F +I L
Sbjct: 481 LLLEHMVSKGYCLST-SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGL 539
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
C ++AY+ F E +P+ T ++ L K + EA +++ +++
Sbjct: 540 CRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQ 592
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 3/201 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++I + +AG A++ M + G + + N L+ C +L +L D
Sbjct: 569 SIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSN 628
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L+PD ++Y ++ ++C + + A+ +N+M G E TY ++ L +
Sbjct: 629 --GLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLN 686
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+A +L E+ + YN + +R L + KP+TI+ N ++
Sbjct: 687 QAGKLLDELVAVDCSPNSVTYNTLMDGICSDVLDRAMILTGRLIKMAFKPNTITLNVFLS 746
Query: 281 CYCKNEMMDEAKKVYEGLEEN 301
+CK + A E L E+
Sbjct: 747 HFCKQGFGNRALMWAEKLRED 767
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 137/326 (42%), Gaps = 75/326 (23%)
Query: 109 QAGMFDHAMRTFDQMDELGTP-RSVISFNALLFACTRSRLYDKVPILFDEIPKK------ 161
QAG D A R D+M+ LGT V+++N L+ AC + R L +E+ K
Sbjct: 325 QAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384
Query: 162 ----------------------------YNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
L+PD I+Y L+ ++C +G+ KA L++E
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444
Query: 194 MENKGVEVTT-----------------------------------VTYTTVLNCLYKQGN 218
M KG+++ T V+Y TV+ +K+ N
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISY 275
E A RLW +M ++ + ++ YN I ERLKE ID E + GL PD +Y
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRM--ERLKEAIDKLNEFVEKGLVPDETTY 562
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ YCK ++ A + + + EN P+ T T + LC G DKA K+F+ V
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
K D T L++ + K + A
Sbjct: 623 KGKKVDVITYNTLIQSMCKVGDVDTA 648
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 5/320 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL S++ SP + Y L + + L+ K D +P L
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAH--CRKGMLGEARALLARMKRDGIAPTQPTYNTL 284
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
+ ++ + G A + + M G + ++N L ++ D+ L DE+ +
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGT 344
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
PD ++Y L+ + S AL LL EM +KGV+ T VT+ V+ L K+G EEA
Sbjct: 345 ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ ++G+ DV YN I + Y G+ + L+DEM GLK DT + N ++
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLI-DAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYN 463
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + ++A+++ + G P+ ++ T + N + A +++ + + IP
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+T L++GL + +++KEA
Sbjct: 524 ISTYNTLIKGLCRMERLKEA 543
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ ++ G A+ T M G +++N LL A R + + L + K+
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM-KRD 272
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P + +Y L+ + G +A +++ M G E TY + L + G +EA
Sbjct: 273 GIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEA 332
Query: 223 ERLWSEMEKKGVDL-DVAAYNVRITNTY----GGDPERLKELIDEMRDAGLKPDTISYNF 277
RL EME+ G L DV YN + + D RL ++EMRD G+KP +++N
Sbjct: 333 FRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRL---LEEMRDKGVKPTLVTHNI 389
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK ++EA E + E G +P+ T+ T I C +GN KA+ + E V
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
D T+ ++ L K K+ ++A+ ++ + ++ F P+
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y +AG A D+M G + N +L+ + + Y+ L P++
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR- 483
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD++SYG ++ ++ + + AL L ++M + + + TY T++ L + +EA
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+E +KG+ D YN+ I + Y GD E ++M + KPD ++ N LM
Sbjct: 544 IDKLNEFVEKGLVPDETTYNI-IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + +D+A K++E E G + T+ T I +C G+ D A F + + P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D T +++ L + + +EA ++ +
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKL 690
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 40/324 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K KR+ D E L+ S + E ++ +Y + + A+R +DQM E S
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++N L+ C RL + + L + + K L PD+ +Y +++ ++C G + A
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNEFVEK--GLVPDETTYNIIIHAYCKEGDLENAFRF 581
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
N+M + VT T++N L G ++A +L+ +KG +DV YN I +
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG------- 302
GD + D+M GL+PD +YN +++ + +EA + L ++G
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701
Query: 303 CS------------------PNA-----------TTFRTWIYHLCGSGNFDKAYKVFKES 333
C P A T+ + LC G +A V E
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKK 357
+ D +T L+EGL+K++K
Sbjct: 762 MQKGMPVDCSTYITLMEGLIKRQK 785
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 3/217 (1%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L P+ ++ LL+ +HC G+ AL L+ M+ G+ VTY T+LN ++G EA
Sbjct: 204 LHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 263
Query: 224 RLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L + M++ G+ YN ++ G ++ ++++ M G +PD +YN L
Sbjct: 264 ALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGL 323
Query: 283 CKNEMMDEAKKVYEGLEENGCS-PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ +DEA ++ + +E G + P+ T+ T + A ++ +E P
Sbjct: 324 CQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPT 383
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T ++V+ L K+ K++EA G + I ++ P+V+
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVI 420
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 222 AERLWSEMEKKGVDLDVAAYNV---RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A+ L S ++GV + A N ++ + P+ ++ + + L P+ ++N L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
+ +C + +A ++ G SP+A T+ T + C G +A + K +
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
P +NT LV + IK+A V+ ++
Sbjct: 275 APTQPTYNT---LVSAFARLGWIKQATKVVESM 304
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 13/312 (4%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
A + TVRRLA + ++ ++ + E L I ++ +AG D A++TF +
Sbjct: 57 AHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRA 116
Query: 124 -DELGTPR-SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+LG +V +N LL A R L V ++D + +K + P+ +Y LL+K+ C +
Sbjct: 117 RHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNM-RKAGVEPNVYTYNLLIKALCQN 175
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
A +L+EM KG V++TT+++ L K +EA + +EM G A+Y
Sbjct: 176 DRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVG-----ASY 230
Query: 242 NVRITNTYGGDPERLKEL---IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
N + G R++E+ +DEM GL+PDT++Y ++ +CK + A + +
Sbjct: 231 NAVVHALCG--QFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARM 288
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
GC PN TF + G A ++ V P + +L+ GL +
Sbjct: 289 VTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDL 348
Query: 359 KEAKGVIRTIKK 370
K A V + K
Sbjct: 349 KRALFVFSCMGK 360
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%), Gaps = 6/253 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG D AM ++ M G +V+ + ++ + ++D+ L D++ +
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLE- 431
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N P+ +++ L++S CD G + +AL + + M G TY +L+ L+++GN E+A
Sbjct: 432 NCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDA 491
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
R+ +EM G +L + +YN I+ +KE L+ M G++PD ++N ++
Sbjct: 492 LRMLTEMLNHGFELSLVSYNTTISGLC--QMRMIKEAMILLGRMIIQGIQPDAFTFNAII 549
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YCK + A + ++ C N + + + LC D A + +
Sbjct: 550 HAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGIC 609
Query: 340 PDFNTVKLLVEGL 352
P+ T +LV G+
Sbjct: 610 PNEATWNVLVRGI 622
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 140/332 (42%), Gaps = 12/332 (3%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
+Y ++ K P + Y +L ++ L ++ R +++ E +I +
Sbjct: 149 VYDNMRKAGVEP--NVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISA 206
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLS 165
+ D A +M +G S+NA++ A C + R+ + V ++ DE+ + L
Sbjct: 207 LCKLDRLDEARGILAEMTPVGA-----SYNAVVHALCGQFRMRE-VFLVVDEMVHR-GLR 259
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++Y ++ + C + A +L M +G T+T ++ + G +A +
Sbjct: 260 PDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGM 319
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
W+ M +G +YNV I + GD +R + M + PD +Y+ L+ + K
Sbjct: 320 WNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSK 379
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+D A ++ + GC PN + + LC FD+A + + + + P+ T
Sbjct: 380 AGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLT 439
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
L+ L + A V +++ PPN
Sbjct: 440 FNTLIRSLCDLGRAGRALNVFHGMRRYGCPPN 471
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 44/280 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L++ + G A+ ++ M G S IS+N L+ + +F + K
Sbjct: 303 LVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD 362
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y L+ +G D A+ + N+M N G + V YT +++ L K+ ++A
Sbjct: 363 CL-PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQA 421
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E LID+M P+T+++N L+
Sbjct: 422 E----------------------------------NLIDKMSLENCPPNTLTFNTLIRSL 447
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH----K 338
C A V+ G+ GC PN T+ ++ L GN + A ++ E ++ H
Sbjct: 448 CDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTE-MLNHGFELS 506
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ +NT + GL + + IKEA ++ R I + P+
Sbjct: 507 LVSYNTT---ISGLCQMRMIKEAMILLGRMIIQGIQPDAF 543
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 98/245 (40%), Gaps = 38/245 (15%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE--SHKNDPKITQE 97
D D A+ I++ ++ P Y + V L K F E LI+ S +N P T
Sbjct: 382 DLDVAMSIWNDMTNAGCKPNVVVYTNMVDV--LCKKVMFDQAENLIDKMSLENCPPNTLT 439
Query: 98 -----PYLCNL------------IRSYG----------------QAGMFDHAMRTFDQMD 124
LC+L +R YG + G + A+R +M
Sbjct: 440 FNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEML 499
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
G S++S+N + + R+ + IL + + + PD ++ ++ ++C G+
Sbjct: 500 NHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQ-GIQPDAFTFNAIIHAYCKEGNV 558
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
A +L M+ V YT++++ L Q ++A +M +G+ + A +NV
Sbjct: 559 RAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVL 618
Query: 245 ITNTY 249
+ +
Sbjct: 619 VRGIF 623
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L++ Y G D M G FN L+ A + D+ ++F ++ +
Sbjct: 340 CTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM-R 398
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ L+P+ ++YG ++ C SGS D A+ +M ++G+ + YT++++ L +
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWD 458
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+AE L EM +G+ L+ +N I ++ G ++L D M G+KP+ I+Y+ L+
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC MDEA K+ + G P+ T+ T I C D A +FKE V
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P+ T ++++GL ++ AK + I K
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITK 609
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A T+ +M + V+++++++ A + + DK + + K
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN- 260
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y +L +C S +A+ L +M + GVE VTY ++++ L K G + EA
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G++ D+A Y + T G E + L+D M G+ PD +N L+
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE-MHALLDLMVRNGIHPDHHVFNILIC 379
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K E +DEA V+ + ++G +PN T+ I LC SG+ D A F++ + P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
+ L+ L K +A+ +I
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELI 464
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 6/316 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++S + +H +P Y + + L KS D E ++
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGI--LCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI S +D A +M + G + I FN+++ + C R+ + LFD +
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK-LFD-LMV 503
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ + P+ I+Y L+ +C +G D+A +LL+ M + G++ VTY T++N + +
Sbjct: 504 RIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMD 563
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
+A L+ EM GV ++ YN+ + + KEL + +G + + +YN ++
Sbjct: 564 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CKN + DEA ++++ L TF I L G D+A +F +
Sbjct: 624 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 683
Query: 340 PDFNTVKLLVEGLVKK 355
PD T L+ E L+++
Sbjct: 684 PDVRTYSLMAENLIEQ 699
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 147/322 (45%), Gaps = 39/322 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y + D AM F +M + G +V+++ A++ +S D + F+++ +
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE- 435
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ I Y L+ S C DKA EL+ EM ++G+ + T+ + ++++ K+G E+
Sbjct: 436 GLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIES 495
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN------------------TYGGDPE---------- 254
E+L+ M + GV +V Y+ I + G P+
Sbjct: 496 EKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLING 555
Query: 255 -----RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
R+ + L EM +G+ P+ I+YN ++ AK++Y G+ ++G
Sbjct: 556 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+T+ ++ LC + D+A ++F+ + + T +++ L+K + EAK +
Sbjct: 616 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 675
Query: 367 TIKKK-FPPNVLRAWKKVEEEL 387
+ P+V R + + E L
Sbjct: 676 ALSANGLVPDV-RTYSLMAENL 696
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 40/279 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG D + + G I+F LL C R D + I+ + +
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE- 151
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGN 218
+ PD S +LLK CD S +ALELL+ M + G V+YTTV+N +K+G+
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+++A +TY EM D + PD ++Y+ +
Sbjct: 212 SDKA-----------------------YSTY-----------HEMLDRRISPDVVTYSSI 237
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + MD+A +V + +NG PN T+ + ++ C S +A K+
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T L++ L K + EA+ + ++ K+ P++
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y AG D A + M +G +++N L+ R D LF E+
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS- 575
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ I+Y ++L+ + + A EL + G ++ TY +L+ L K +EA
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R++ + + L+ +N+ I G + K+L + GL PD +Y+ +
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 695
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ +++E ++ +EENGC+ N+ + + L G+ +A
Sbjct: 696 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 149/326 (45%), Gaps = 28/326 (8%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K++R S+ L+E I LI + ++ D A+R F+Q+ G
Sbjct: 64 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 123
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
V++++ L+ C RL + + LF + K + P+ ++Y L+ C G D+A+ L
Sbjct: 124 VVTYSCLIDGLCKEGRLKEAID-LFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 182
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L M G VTYTT++N K ++A L ++M +KG+ +V + T+
Sbjct: 183 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTF----TSLMD 238
Query: 251 G--DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G RL + ++ EMR P +YN ++ YC+ ++EA+K LEE C P
Sbjct: 239 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPP 296
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N +F I LC +A ++ +E+ PD +++ L ++KK+ EA
Sbjct: 297 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEA---- 352
Query: 366 RTIKKKFPPNVLRAWKKVEEELGLVP 391
R ++K+ EE G +P
Sbjct: 353 -----------CRVYRKMLEEPGCLP 367
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + + G D AM ++M E G+ V+++ L+ C +RL D +L +++ +
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL-NQMTR 223
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K L+P+ +++ L+ C A+ +L EM K T TY T+L+ + E
Sbjct: 224 K-GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLE 282
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
EA + +E+ +V ++N+ I + EL++E R PD + Y ++
Sbjct: 283 EARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 340
Query: 280 TCYCKNEMMDEAKKVYEG-LEENGCSPNATTFRTWIY 315
C+ + +DEA +VY LEE GC PN+ T+ T+ Y
Sbjct: 341 DVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTFDY 377
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
++DA P ++YN L++ CK E EA + E + +GC P+ T+ T I C S
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
D A +VF++ V PD T L++GL K+ ++KEA
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 143
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ G+ D A+ ++ EL P + + N +L R R + LF+++P
Sbjct: 134 LLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP--- 190
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ ++ +++ C G +A LL M+ G VTY ++++ K G EE
Sbjct: 191 --APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEV 248
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E+L EM G DV YN + N + G ER EM+ G+ + ++++ +
Sbjct: 249 EKLVGEMRGCGCRPDVVTYNA-LVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CKN M+ EA K++ + G PN T+ + C +G D A + E V
Sbjct: 308 AFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL 367
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ T +LV+GL K+ K+ EA+ V R +++
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMER 397
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 21/285 (7%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G + A F +M G +V++F+ + A ++ + + LF ++ K
Sbjct: 270 LVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMK- 328
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P++++Y L+ C +G D AL L NEM +GV + VTYT +++ L K+G EA
Sbjct: 329 GMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEA 388
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E ++ ME+ G+ + Y I + + ER L+ EM+D G++ D Y L+
Sbjct: 389 EDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWG 448
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES---VMVHK 338
C + +DEAK + ++E G PN + + D +K KES ++ K
Sbjct: 449 LCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM---------DACFKARKESEAIALLQK 499
Query: 339 I------PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
+ P+ T LV+GL K I EA + + PNV
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNV 544
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 9/228 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LCNL + D A ++MDE G + + + ++ AC ++R + L ++
Sbjct: 449 LCNLQK-------LDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
P+ ++Y L+ C +GS D+A+ N+M + G+E YT +++ L K G
Sbjct: 502 DS-GFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560
Query: 220 EEAERLWSEMEKKGVDLD-VAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
++A L EM KG+ LD V ++ + G+ + L +M ++GL+ D Y
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCF 620
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ +C M+ EA++V + ENG +P+A + I GN ++A
Sbjct: 621 VWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEA 668
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 6/204 (2%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LL D G D A+ L + V T T +L CL ++ ++E A RL+ ++
Sbjct: 134 LLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPAP- 192
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+V +N+ I GD + L+ M+ G PD ++YN L+ Y K ++E +
Sbjct: 193 ---NVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVE 249
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
K+ + GC P+ T+ + C G ++AY F E + + T V+
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAF 309
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPN 375
K ++EA + ++ K PN
Sbjct: 310 CKNGMVREAMKLFAQMRMKGMKPN 333
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ +M + G +++++ AL+ ++ D+ F+++ L P+ +Y L+
Sbjct: 493 AIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKM-VDLGLEPNVQAYTALV 551
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C +G DKA+ LL+EM +KG+ + V T++++ KQGN ++A L ++M G+
Sbjct: 552 DGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQ 611
Query: 236 LDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
LD+ Y + + + +E++ EM + G+ PD + YN L+ K M+EA +
Sbjct: 612 LDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAIL 671
Query: 295 YEGLE 299
+E
Sbjct: 672 QNEME 676
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 109/249 (43%), Gaps = 2/249 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A+ +M + G V + AL++ + D+ L +++ + L P+ + Y
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKM-DECGLKPNNVIYTN 479
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ + + +A+ LL +M + G VTY +++ L K G+ +EA +++M G
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539
Query: 234 VDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
++ +V AY + G ++ L+DEM D G+ D + LM + K + +A
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + +G + + +++ C +A +V E + PD L+
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659
Query: 353 VKKKKIKEA 361
K ++EA
Sbjct: 660 QKLGNMEEA 668
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK-- 160
LI+ G A+ D+M E G V+++N+++ RS + D + K
Sbjct: 154 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS---GDTSLALDLLRKME 210
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ N+ D +Y ++ S C G D A+ L EME KG++ + VTY +++ L K G
Sbjct: 211 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 270
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ L +M + + +V +NV + G + EL EM G+ P+ I+YN LM
Sbjct: 271 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 330
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC + EA + + + N CSP+ TF + I C D KVF+ +
Sbjct: 331 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 390
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ T +LV+G + KIK A+ + + + P+V+
Sbjct: 391 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 163/370 (44%), Gaps = 12/370 (3%)
Query: 10 LCTATTAAGSSTTA-SSISVSKA--KSKLRS---EFDPDKALDIYSSVSKHYASPVSSRY 63
LCT ++ S SSIS + +LRS + D A+ ++ + + P +
Sbjct: 22 LCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDF 81
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQ 122
++ + +A++K+F+ + + + + I Y N +I + + A +
Sbjct: 82 SRFFSA--IARTKQFNLVLDFCKQLELNG-IAHNIYTLNIMINCFCRCCKTCFAYSVLGK 138
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+ +LG +FN L+ + +L D + + PD ++Y ++ C SG
Sbjct: 139 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYNSIVNGICRSG 197
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ AL+LL +ME + V+ TY+T+++ L + G + A L+ EME KG+ V YN
Sbjct: 198 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 257
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G L+ +M + P+ I++N L+ + K + EA ++Y+ +
Sbjct: 258 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 317
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G SPN T+ T + C +A + V PD T L++G K++ +
Sbjct: 318 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 362 KGVIRTIKKK 371
V R I K+
Sbjct: 378 MKVFRNISKR 387
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 4/257 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Y A D M +++F +L+ C R+ D + + F I K+
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV-FRNISKR 387
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L + ++Y +L++ C SG A EL EM + GV +TY +L+ L G E+
Sbjct: 388 -GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 446
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +++K +DL + Y I GG E L + G+KP+ ++Y +++
Sbjct: 447 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 506
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA + +EE+G +PN T+ T I G+ + K+ +E
Sbjct: 507 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 566
Query: 341 DFNTVKLLVEGLVKKKK 357
D +++K++++ L+ K
Sbjct: 567 DASSIKMVIDMLLSAMK 583
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 136/303 (44%), Gaps = 4/303 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
VR L K+ +++D L++ + + L+ + + G A + +M G
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++I++N L+ C ++RL + +L ++ + SPD +++ L+K +C D
Sbjct: 320 SPNIITYNTLMDGYCMQNRLSEANNML--DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 377
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+++ + +G+ VTY+ ++ + G + AE L+ EM GV DV Y + +
Sbjct: 378 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 437
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E+ E+ ++++ + + + Y ++ CK +++A ++ L G PN
Sbjct: 438 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 497
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ I LC G+ +A + ++ P+ T L+ ++ + + +I
Sbjct: 498 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIE 557
Query: 367 TIK 369
+K
Sbjct: 558 EMK 560
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI+ +AG D A+R + L P VI+ ++ C SRL D + F E +
Sbjct: 163 TLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK--FMEEMR 220
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME-NKGVEVTTVTYTTVLNCLYKQGNA 219
+ + P++++Y L+ G D+ + E + KG + Y L+ L K G
Sbjct: 221 QMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYL 280
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
+ A + E+ + GV DV Y++ I NT+ G + EL+++MR G+KPD ++Y+
Sbjct: 281 DRARKSVEELRQSGVVPDVVTYSMLI-NTFARAGQFDASLELLEDMRRNGVKPDVVTYST 339
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK +A ++ E +E G PN T+ + + LC SG D+ ++V++ +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD T +++ GL K + A + IK
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 14/289 (4%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+A D A++ ++M ++G + ++++ L+ + D+V F+E + S +
Sbjct: 205 KASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEA 264
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y L + C +G D+A + + E+ GV VTY+ ++N + G + + L +
Sbjct: 265 AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 229 MEKKGVDLDVAAY----NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
M + GV DV Y NV D RL EL M AG P+ ++YN +M CK
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLEL---MEAAGSPPNVVTYNSVMDGLCK 381
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ MDE +VYE + ++ CSP+ T+ + L +G D A K+F+ + PD
Sbjct: 382 SGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAA 441
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKKFPP-NVLRAWKKVEEELGLVPA 392
+++ L + K++EA G+ ++ N+ RA GLV A
Sbjct: 442 YSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALA------GLVAA 484
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 151/339 (44%), Gaps = 7/339 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++AL++ +S Y V + + + L ++ R D ++E + +
Sbjct: 71 NQALELVRELSGVYTPTV---FIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYT 127
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ ++ A F +M G + I++ L+ +R+ D+ + E +
Sbjct: 128 ILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIE-QRS 186
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D I+ ++ C + D AL+ + EM GV VTY+ +++ + G +
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDR 246
Query: 222 AERLWSEME-KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
R + E + +KG L+ AAY + G +R ++ ++E+R +G+ PD ++Y+ L+
Sbjct: 247 VIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLI 306
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + D + ++ E + NG P+ T+ T I LC F A+++ +
Sbjct: 307 NTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSP 366
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
P+ T +++GL K K+ E V +K + P+V+
Sbjct: 367 PNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVV 405
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 50/354 (14%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
L +L + +FS++ L + + E ++ AGM + A+ ++ +
Sbjct: 24 LLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV 83
Query: 127 GTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
TP +V +N ++ C SR+ D +L + + ++ P+ +Y +LL C S +
Sbjct: 84 YTP-TVFIYNGIITGLCRASRVMDAYKVLEKMVEE--SIVPNVFTYTILLNGLCRSNKTK 140
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A E+ EM+ G + +TY T++ L + G +EA R+ E + DV +
Sbjct: 141 LAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDV----ITC 196
Query: 246 TNTYGG--DPERLKE---LIDEMRDAGLKPDTISYNFLMTCY------------------ 282
T GG RL + ++EMR G++P+ ++Y+ L+ +
Sbjct: 197 TTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKA 256
Query: 283 ------------------CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
CK +D A+K E L ++G P+ T+ I +G FD
Sbjct: 257 RKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFD 316
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ ++ ++ PD T L+ L K++K ++A ++ ++ PPNV+
Sbjct: 317 ASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV 370
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 9/228 (3%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG D A ++ +++ + G V++++ L+ R+ +D L +++ ++ + PD
Sbjct: 276 KAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM-RRNGVKPDV 334
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y L+ C A LL ME G VTY +V++ L K G +E R++
Sbjct: 335 VTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEM 394
Query: 229 MEKKGVDLDVAAYNVRITNTYGG----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
M K DV Y++ + +L ELI R+ PD +Y+ ++T C+
Sbjct: 395 MLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG---PDAAAYSMVITSLCR 451
Query: 285 NEMMDEAKKVYEGLEENGCSPN-ATTFRTWIYHLCGSGNFDKAYKVFK 331
++EA +Y G+E N + LC + D A ++ +
Sbjct: 452 AGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVE 499
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 67 LTVRRLAKSKRF-SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ + A++ +F + +E L + +N K Y LI + F A R + M+
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTY-STLINVLCKERKFQDAFRLLELMEA 362
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G+P +V+++N+++ +S D+V ++ E+ K SPD ++Y +++ +G D
Sbjct: 363 AGSPPNVVTYNSVMDGLCKSGKMDEVHRVY-EMMLKSRCSPDVVTYSIIMNGLSKAGMLD 421
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
A++L +++ Y+ V+ L + G EEA ++ ME
Sbjct: 422 SAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
+AG K D+ ++ L T + E +++ L G TT++ + LCG+G +
Sbjct: 12 EAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+A ++ +E V+ P ++ GL + ++ +A V+ + +++ PNV
Sbjct: 72 QALELVRELSGVYT-PTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI+ +AG D A+R + L P VI+ ++ C SRL D + F E +
Sbjct: 163 TLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK--FMEEMR 220
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME-NKGVEVTTVTYTTVLNCLYKQGNA 219
+ + P++++Y L+ G D+ + E + KG + Y L+ L K G
Sbjct: 221 QMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYL 280
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
+ A + E+ + GV DV Y++ I NT+ G + EL+++MR G+KPD ++Y+
Sbjct: 281 DRARKSVEELRQSGVVPDVVTYSMLI-NTFARAGQFDASLELLEDMRRNGVKPDVVTYST 339
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK +A ++ E +E G PN T+ + + LC SG D+ ++V++ +
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
PD T +++ GL K + A + IK
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIK 431
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 137/289 (47%), Gaps = 14/289 (4%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+A D A++ ++M ++G + ++++ L+ + D+V F+E + S +
Sbjct: 205 KASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEA 264
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y L + C +G D+A + + E+ GV VTY+ ++N + G + + L +
Sbjct: 265 AAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLED 324
Query: 229 MEKKGVDLDVAAY----NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
M + GV DV Y NV D RL EL M AG P+ ++YN +M CK
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLEL---MEAAGSPPNVVTYNSVMDGLCK 381
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ MDE +VYE + ++ CSP+ T+ + L +G D A K+F+ + PD
Sbjct: 382 SGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAA 441
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKKFPP-NVLRAWKKVEEELGLVPA 392
+++ L + K++EA G+ ++ N+ RA GLV A
Sbjct: 442 YSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALA------GLVAA 484
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +M G + I++ L+ +R+ D+ + E + L D I+ ++
Sbjct: 142 AREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIE-QRSLELPTDVITCTTIV 200
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME-KKGV 234
C + D AL+ + EM GV VTY+ +++ + G + R + E + +KG
Sbjct: 201 GGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGG 260
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
L+ AAY + G +R ++ ++E+R +G+ PD ++Y+ L+ + + D + +
Sbjct: 261 SLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLE 320
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ E + NG P+ T+ T I LC F A+++ + P+ T +++GL
Sbjct: 321 LLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLC 380
Query: 354 KKKKIKEAKGVIR-TIKKKFPPNVL 377
K K+ E V +K + P+V+
Sbjct: 381 KSGKMDEVHRVYEMMLKSRCSPDVV 405
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 147/353 (41%), Gaps = 48/353 (13%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
L +L + +FS++ L + + E ++ AGM + A+ ++ +
Sbjct: 24 LLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV 83
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
TP I + C SR+ D +L + + ++ P+ +Y +LL C S +
Sbjct: 84 YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEE--SIVPNVFTYTILLNGLCRSNKTKL 141
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A E+ EM+ G + +TY T++ L + G +EA R+ E + DV + T
Sbjct: 142 AREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDV----ITCT 197
Query: 247 NTYGG--DPERLKE---LIDEMRDAGLKPDTISYNFLMTCY------------------- 282
GG RL + ++EMR G++P+ ++Y+ L+ +
Sbjct: 198 TIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKAR 257
Query: 283 -----------------CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
CK +D A+K E L ++G P+ T+ I +G FD
Sbjct: 258 KGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDA 317
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ ++ ++ PD T L+ L K++K ++A ++ ++ PPNV+
Sbjct: 318 SLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVV 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 13/258 (5%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG D A ++ +++ + G V++++ L+ R+ +D L +++ ++ + PD
Sbjct: 276 KAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM-RRNGVKPDV 334
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++Y L+ C A LL ME G VTY +V++ L K G +E R++
Sbjct: 335 VTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEM 394
Query: 229 MEKKGVDLDVAAYNVRITNTYGG----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
M K DV Y++ + +L ELI R+ PD +Y+ ++T C+
Sbjct: 395 MLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREG---PDAAAYSMVITSLCR 451
Query: 285 NEMMDEAKKVYEGLEENGCSPN-ATTFRTWIYHLCGSGNFDKAYKVFK-ESVMVHKIP-- 340
++EA +Y G+E N + LC + D A ++ + S H++
Sbjct: 452 AGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHRMTKS 511
Query: 341 -DFNTVKLLVEGLVKKKK 357
D + VK++ + L++ K+
Sbjct: 512 GDTDLVKIVEDHLLESKE 529
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 67 LTVRRLAKSKRF-SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ + A++ +F + +E L + +N K Y LI + F A R + M+
Sbjct: 304 MLINTFARAGQFDASLELLEDMRRNGVKPDVVTY-STLINVLCKERKFQDAFRLLELMEA 362
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G+P +V+++N+++ +S D+V ++ E+ K SPD ++Y +++ +G D
Sbjct: 363 AGSPPNVVTYNSVMDGLCKSGKMDEVHRVY-EMMLKSRCSPDVVTYSIIMNGLSKAGMLD 421
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
A++L +++ Y+ V+ L + G EEA ++ ME
Sbjct: 422 SAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
+AG+K D+ ++ L T + E +++ L G TT++ + LCG+G +
Sbjct: 12 EAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMAN 71
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+A ++ +E V+ P ++ GL + ++ +A V+ + +++ PNV
Sbjct: 72 QALELVRELSGVYT-PTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVF 124
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 19/293 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+ R+Y +A + A+R F QM + G V + LL+ + + + FD++
Sbjct: 129 IFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKV--NV 186
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y +L++ D G S +A +L EM +G V V Y ++L L K GN +EA
Sbjct: 187 EVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEA 246
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ EM G+ D +Y++ I D +++D MR L P+ +YN ++
Sbjct: 247 YKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKK 306
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+E +DEA ++ + + E G SP+ ++ C +KA ++ + +PD
Sbjct: 307 LCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPD 366
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPA 394
+T ++++ L++ + V W +EE G PA +
Sbjct: 367 RHTYNMVLKMLLRVGRFDRVTDV---------------WGGMEER-GFYPAAS 403
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ L+ +++C + A+ ++M + GV+ +L L K+ + ++A+ + ++
Sbjct: 126 FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVN 185
Query: 231 KKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ V + Y++ + +G GD ++L +EMR+ G D ++YN L+ CK +
Sbjct: 186 VE-VMPNAKTYSI-LMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNV 243
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
DEA K++ + NG +P+A ++ +I C + A++V + +P+ T +
Sbjct: 244 DEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCI 303
Query: 349 VEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
V+ L K +K+ EA ++ I++ P++
Sbjct: 304 VKKLCKSEKVDEAYQLLDEMIERGVSPDL 332
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 44/272 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
IR+Y + A + D+M +V ++N ++ +S D+ L DE+ ++
Sbjct: 268 FIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIER- 326
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD SY + HCD +KAL L++ ME + TY VL L + G +
Sbjct: 327 GVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFD-- 384
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
R+T+ +GG ER G P +Y ++ +
Sbjct: 385 ---------------------RVTDVWGGMEER-----------GFYPAASTYAVMVHGF 412
Query: 283 CKNE-MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + ++EA K +E + ++G P + T + G G F E + V
Sbjct: 413 CKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLG--------FSEQIDVLAGKM 464
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
+ +++ L + ++A G +R+ ++ P
Sbjct: 465 ERSTSCVIQELSSVMRGEKASGRLRSEEQNLP 496
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 134/272 (49%), Gaps = 4/272 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y + GM AM ++M + G V+++N +L + ++ + LF+E+ ++
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER- 474
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD + +L+ HC G+ A+EL +M+ K + + VTY T+L+ K G+ + A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +W++M K + +Y++ + G + DEM +KP + N ++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK--ESVMVHKI 339
YC++ + + E + G P+ ++ T IY N KA+ + K E +
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD T ++ G ++ ++KEA+ V+R + ++
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 160/367 (43%), Gaps = 45/367 (12%)
Query: 45 LDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIE---TLIESHKNDPKITQEPYLC 101
L+I +S+ +++ S+ DL +R ++++ + TL+ S I C
Sbjct: 148 LEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDA----C 203
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI S + G + A + ++ G +V + N ++ A + +KV ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K + PD ++Y L+ ++ G ++A EL+N M KG TY TV+N L K G E
Sbjct: 264 K-GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN--------------------------------- 247
A+ +++EM + G+ D Y +
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 248 ---TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
T G+ ++ + +++AGL PD + Y L+ YC+ M+ A + + + GC+
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ T+ T ++ LC +A K+F E PD T+ +L++G K ++ A +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 365 IRTIKKK 371
+ +K+K
Sbjct: 503 FQKMKEK 509
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 135/311 (43%), Gaps = 53/311 (17%)
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
+ F M ++ F++++ TRS DK + F+ + K+ L PD + Y +L++
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTILIQG 419
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ--------------------- 216
+C G A+ L NEM +G + VTY T+L+ L K+
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 217 --------------GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELI 260
GN + A L+ +M++K + LDV YN + + +G GD + KE+
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT-LLDGFGKVGDIDTAKEIW 538
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+M + P ISY+ L+ C + EA +V++ + P + I C S
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAW 380
GN ++ + +PD + L+ G V+++ + +A G+++ ++
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME----------- 647
Query: 381 KKVEEELGLVP 391
EE+ GLVP
Sbjct: 648 ---EEQGGLVP 655
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 10/276 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K K + + L L LI + + G +AM F +M E
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++N LL + D ++ ++ K + P ISY +L+ + C G +A +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+EM +K ++ T + +++ + GNA + E +M +G D +YN I YG
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI---YGF 630
Query: 252 DPE----RLKELIDEMRD--AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
E + L+ +M + GL PD +YN ++ +C+ M EA+ V + E G +P
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +T+ I N +A+++ E + PD
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G A F +M + G P +V+++N+++ A ++R DK + ++ + PD ++
Sbjct: 225 GKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGN-GVQPDNVT 283
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ + G +A+ + EM ++GV TVT +T + L K G EEA + M
Sbjct: 284 YNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSML 343
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG L++ +Y+ + G + L + M G+ P+ +N L+ Y K M+
Sbjct: 344 AKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVR 403
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA ++E +++ G +P+ T+ I+ C G+ D A F + P+F + L+
Sbjct: 404 EAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLI 463
Query: 350 EGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+G + +A+ ++ I+ K P +L
Sbjct: 464 QGFCTHGDLVKAEELVYEIRNKGLGPCIL 492
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 2/297 (0%)
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
A + D+ L D + + L+ Y + GM AM F+ M + G V
Sbjct: 362 ATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDV 421
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
+++ A++ A R D F+ + K + P+ Y L++ C G KA EL+
Sbjct: 422 LTYLAVIHAFCRMGSMDDAMDKFNHMIDK-GVEPNFAVYQCLIQGFCTHGDLVKAEELVY 480
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGG 251
E+ NKG+ +++ +++N L K+G EA+R++ + + G DV + I G
Sbjct: 481 EIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIG 540
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ D M G++PD ++Y L+ CKN +D+ ++ L G P T+
Sbjct: 541 KMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYG 600
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ L +G A ++F+E + T +L+ GL + +EA V + +
Sbjct: 601 IILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKL 657
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 38/263 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +A D A F + G VI ++LL C R + V +LF +P+
Sbjct: 109 LIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPE- 167
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM--ENKGVEVTTVTYTTVLNCLYKQGNA 219
PD ISY +LKS CD G S AL++L + G V Y+TV++ L+K+G
Sbjct: 168 LGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKV 227
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L+ EM ++G + P+ ++YN ++
Sbjct: 228 GEACDLFHEMTQQG----------------------------------VPPNVVTYNSVI 253
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK +D+A+ + + NG P+ T+ T I+ G + +A ++FKE I
Sbjct: 254 HALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVI 313
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
P+ T V L K +I+EA+
Sbjct: 314 PNTVTCSTFVAFLCKHGRIEEAR 336
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 123/262 (46%), Gaps = 2/262 (0%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G + A FD M G ++IS++ LL + + LF+ + + + P++
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRD-GIVPNQHV 388
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ +L+ + G +A+ + +M+ +G+ +TY V++ + G+ ++A ++ M
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KGV+ + A Y I GD + +EL+ E+R+ GL P +S+ L+ CK +
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF 508
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA+++++ + G + F + I C G +A++V V V PD T LV
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568
Query: 350 EGLVKKKKIKEAKGVIRTIKKK 371
G K +I + + R + K
Sbjct: 569 NGCCKNGRIDDGLILFRELLHK 590
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 4/262 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + G A R FD + G V F +L+ C ++ + + +
Sbjct: 496 SLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRV--HDAMV 553
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD ++YG L+ C +G D L L E+ +KGV+ TT TY +L+ L+ G
Sbjct: 554 SVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTA 613
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
A+ ++ EM + G+ + + Y++ +T + E + ++ +K D + N ++
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K +EA+ ++ + + G P T+ + +L G+ ++A VF +
Sbjct: 674 SKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLS 733
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
P + + ++V L++K +I +A
Sbjct: 734 PTSHFINVIVRTLLEKGEIVKA 755
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 9/265 (3%)
Query: 93 KITQEPYLCNLIR-SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD- 149
+I+ Y N++ ++ + G + A+ F +M+ +G ++ S+N L+ C + L
Sbjct: 309 RISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSG 368
Query: 150 -KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
K+ IL + K + PD +++ L+ C G +A ++ +EM+ V T+TY T
Sbjct: 369 MKLKILME----KNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 424
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG 267
++N + GN+E RL EM + G+ D+ YN I G ++ L+ E+
Sbjct: 425 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDREN 484
Query: 268 LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
L P++ +++ L+T C + + A ++Y+ + +GC PN TF+ I C + +FD A
Sbjct: 485 LVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAV 544
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGL 352
+V +E PD +T+ L GL
Sbjct: 545 EVVREMSERSIAPDSDTLSELCRGL 569
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ + +M +V + N ++ A + +K +F + + SP SY
Sbjct: 296 DIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRM-ETMGFSPTITSYNT 354
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ +C+ G + ++L ME GV VT+ T++N + G EA +++SEM+
Sbjct: 355 LIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKAND 414
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V + YN I N Y G+ E L DEM G+K D ++YN L+ C +A
Sbjct: 415 VVPNTITYNTLI-NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKA 473
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ + L+ PN++TF I C N ++A++++K + P+++T K+L+
Sbjct: 474 AYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLIST 533
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
K + A V+R + ++
Sbjct: 534 FCKNEDFDGAVEVVREMSER 553
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 20/218 (9%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
F A+L++ R+ D P +FD L K++ A+++ +M
Sbjct: 230 FEAILYS---YRICDSSPCVFDS----------------LFKTYAQMKKLRNAIDVFCQM 270
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN-VRITNTYGGDP 253
++ G + ++ + A + EM++ + +V N V G
Sbjct: 271 KDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKL 330
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
E+ E+ M G P SYN L+ YC +++ K+ +E+NG P+ TF T
Sbjct: 331 EKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTL 390
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
I C G +A K+F E +P+ T L+ G
Sbjct: 391 INGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLING 428
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 22/190 (11%)
Query: 187 ALELLNEMENKGVEVTTV-TYTTVLNCLYKQGNAEEAERLWSEMEKKG-VD-----LDVA 239
+ E N ++ + T+ TY+ +L+ L K + AE + + G +D +
Sbjct: 174 SFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAI 233
Query: 240 AYNVRITN-----------TYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCYCKN 285
Y+ RI + TY ++L+ ID +M+D G P S N ++
Sbjct: 234 LYSYRICDSSPCVFDSLFKTYA-QMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISL 292
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+ D A Y ++ SPN T + C G +KA +VFK + P +
Sbjct: 293 QRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSY 352
Query: 346 KLLVEGLVKK 355
L+ G K
Sbjct: 353 NTLIAGYCNK 362
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 9/259 (3%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKKYNL 164
Y + G + AM D ++ ++ FN+ + CT + + D + L
Sbjct: 300 GYCKVGKSEEAM---DVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMC--EMGL 354
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
PD SY ++ +C AL+ L +M +G+ + TYT +++ K GN E AE
Sbjct: 355 IPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEY 414
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L+ M +G+ DV +YN + N YG G ++ EL+ MR AG+ PD ++YN L+
Sbjct: 415 LFQRMITEGLVPDVVSYNT-LMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGL 473
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
K +++EAK + + L G SP+ TF I GNF++A+ +F H PD
Sbjct: 474 IKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDV 533
Query: 343 NTVKLLVEGLVKKKKIKEA 361
T L+ G + + + EA
Sbjct: 534 VTCSALLNGYCRTRCMAEA 552
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 10/258 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y + +A++ +M + G SV ++ L+ +C + + LF + +
Sbjct: 364 MMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITE- 422
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +SY L+ + G KA ELL+ M + GV VTY +++ L K+G EA
Sbjct: 423 GLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEA 482
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG-----DPERLKELIDEMRDAGLKPDTISYNF 277
+ + E+ ++G DV + TN GG + E L M + L+PD ++ +
Sbjct: 483 KDILDELTRRGFSPDVVTF----TNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSA 538
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ YC+ M EA ++ + + G + + + I+ C GN D A + +
Sbjct: 539 LLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHG 598
Query: 338 KIPDFNTVKLLVEGLVKK 355
+P+ T LV G KK
Sbjct: 599 IMPNNITHHALVLGYEKK 616
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 135/344 (39%), Gaps = 70/344 (20%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + M A++ +M L + N+LL A S + E+ K
Sbjct: 157 LVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM-KSQ 215
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + L + +C G+ D +LL EM+ G++ V YT V++ L K +EA
Sbjct: 216 GLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEA 275
Query: 223 ERLWSEMEKKGVDLDVAAY---------------------------NVRITNTY------ 249
+ +M + GV LD + N+ + N++
Sbjct: 276 TSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCT 335
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+ + ++ +M + GL PD SY +M YCK + + A K + + G P+ T
Sbjct: 336 DGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVAT 395
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD---FNTV--------------------- 345
+ I C GN + A +F+ + +PD +NT+
Sbjct: 396 YTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMR 455
Query: 346 -----------KLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+L+ GL+K+ + EAK ++ + ++ F P+V+
Sbjct: 456 SAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVV 499
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I + G F+ A F M E V++ +ALL R+R + +LF ++
Sbjct: 503 NIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDA 562
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
L D I Y L+ C G+ D A L++ M G+ +T+ ++
Sbjct: 563 -GLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALV 610
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L++ Y G D M G FN L+ A + D+ ++F ++ +
Sbjct: 340 CTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM-R 398
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ L+P+ ++YG ++ C SGS D A+ +M ++G+ + YT++++ L +
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWD 458
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+AE L EM +G+ L+ +N I ++ G ++L D M G+KP+ I+Y+ L+
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLI 518
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC MDEA K+ + G P+ T+ T I C D A +FKE V
Sbjct: 519 DGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVS 578
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P+ T ++++GL ++ AK + I K
Sbjct: 579 PNIITYNIILQGLFHTRRTAAAKELYVGITK 609
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A T+ +M + V+++++++ A + + DK + + K
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN- 260
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y +L +C S +A+ L +M + GVE VTY ++++ L K G + EA
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEA 320
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G++ D+A Y + T G E + L+D M G+ PD +N L+
Sbjct: 321 RKIFDSMTKRGLEPDIATYCTLLQGYATKGALVE-MHALLDLMVRNGIHPDHHVFNILIC 379
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K E +DEA V+ + ++G +PN T+ I LC SG+ D A F++ + P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
+ L+ L K +A+ +I
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELI 464
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 40/279 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +AG D + + G I+F LL C R D + I+ + +
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE- 151
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGN 218
+ PD S +LLK CD S +ALELL+ M + G V+YTTV+N +K+G+
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+++A +TY EM D + PD ++Y+ +
Sbjct: 212 SDKA-----------------------YSTY-----------HEMLDRRISPDVVTYSSI 237
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK + MD+A +V + +NG PN T+ + ++ C S +A K+
Sbjct: 238 IAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGV 297
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T L++ L K + EA+ + ++ K+ P++
Sbjct: 298 EPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDI 336
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+ ++I S+ + G + + FD M +G +VI+++ L+ C ++ + +L
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ PD ++Y L+ +C D AL L EM + GV +TY +L L+
Sbjct: 538 F--SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 595
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYN 276
A+ L+ + K G L+++ YN+ + + + + + L+ +T ++N
Sbjct: 596 RTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFN 655
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ K DEAK ++ NG PN T+R ++ G G ++ ++F
Sbjct: 656 IMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDN 715
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D + +V L+++ +I A + I +K
Sbjct: 716 GCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 3/231 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A+ F +M G ++I++N +L +R L+ I K
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS- 610
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +Y ++L C + +D+AL + + +++ T T+ ++ L K G +EA
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 670
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L+ G+ + Y + N G G E L +L M D G D+ NF++
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRE 730
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ + A ++E S A+T +I L G G + + ++ E
Sbjct: 731 LLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG-GKYQEYHRFLPE 780
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 129/299 (43%), Gaps = 36/299 (12%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK---------- 160
G A R D+M G SV+++ LL R+R D+ + +P+
Sbjct: 264 GHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVI 323
Query: 161 --------------------KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
PD +Y +L+ C G A+ +L+EME KG
Sbjct: 324 RGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCA 383
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKE 258
VTY+T+L+ + G ++A + +M KG ++ YN I G G +
Sbjct: 384 PNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYN-GIIYALGKDGKLDEAMR 442
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L+ EM+ G KPD +YN ++ C N+ MDEA+ ++ L E G N T+ T I+ L
Sbjct: 443 LVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALL 502
Query: 319 GSGNFDKAYKVFKESVMVHKIP-DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
SG + + ++ E V+ H P D + L++ L K+ + + ++ + K PN
Sbjct: 503 HSGRWQEGLRLANEMVL-HGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPN 560
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 4/280 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S+ + GM+D A DQM G + +N +++A + D+ L E+ K
Sbjct: 392 LLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM-KSQ 450
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y ++ C++ D+A + + +GV +TY T+++ L G +E
Sbjct: 451 GCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEG 510
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL +EM G LDV +YN I G+ +R L++EM G+KP+ SYN L+
Sbjct: 511 LRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINE 570
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +A ++ + + G +P+ T+ T I LC G A + ++ + PD
Sbjct: 571 LCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPD 630
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAW 380
T +L+ K + + +A ++ + + PN R W
Sbjct: 631 IVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNE-RTW 669
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 2/254 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G+ G D AMR +M G + ++N +++ + D+ +F + ++
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEE- 485
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ + I+Y L+ + SG + L L NEM G + V+Y ++ L K+GN + +
Sbjct: 486 GVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRS 545
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM KG+ + +YN+ I G EL EM + GL PD ++YN L+
Sbjct: 546 MMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLING 605
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK A + E L P+ T+ I C D A + ++V +P+
Sbjct: 606 LCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPN 665
Query: 342 FNTVKLLVEGLVKK 355
T ++V+ V++
Sbjct: 666 ERTWGMMVQNFVRQ 679
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 8/265 (3%)
Query: 116 AMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ DQM S S+NA+L R+ + +L+ + + + P ++G+
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRD-RVPPTTFTFGVA 186
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
++ C G + AL LL M G V Y TV++ L QG EA L EM G
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246
Query: 235 DLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV +N + G G L+D M G P ++Y FL+ C+ DEA
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + E N T I G +A ++++ PD +T +L+ GL
Sbjct: 307 MLGRVPE----VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNVL 377
K + A ++ +++K PN++
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIV 387
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 151/330 (45%), Gaps = 39/330 (11%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L K K+F + +L+E+ + ++++ + ++R Y +A A+ TF++M G
Sbjct: 186 IEALGKIKQFRLVWSLVEAMRCRGLLSKDTFRL-IVRRYARARKVKEAVETFEKMAGFGL 244
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKK--------------------------- 161
+ +N L+ ++S+ K +F E+ +
Sbjct: 245 KADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLK 304
Query: 162 --------YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L PD ++YG+L+ S C SG D+A+++ EME G + Y ++N L
Sbjct: 305 SVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGL 364
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPD 271
+ +EA + + + G ++V N + Y + +++DEMR +G+ P+
Sbjct: 365 GSEERLDEALKYFELSKASGFPMEVPTCNA-VVGAYCRSSKFQHAFKMVDEMRKSGIGPN 423
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+ +Y+ ++ K++ ++EA V++G+ ++GC P T+ + C + D A KV+
Sbjct: 424 SRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWN 483
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ +P + L+ GL + +++EA
Sbjct: 484 QMKEKGVLPCMHMFSALINGLCFENRLEEA 513
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 12/243 (4%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
SF+ L+ A + + + V L + + + LS D ++ L+++ + + +A+E +
Sbjct: 181 SFHNLIEALGKIKQFRLVWSLVEAMRCRGLLSKD--TFRLIVRRYARARKVKEAVETFEK 238
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTYGGD 252
M G++ Y +++ L K ++A ++ EM++ G + D+ Y V + +G +
Sbjct: 239 MAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTV-LMEGWGHE 297
Query: 253 PE--RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ LK + EM DAGL+PD ++Y L++ +CK+ DEA KV+ +E NGC P+ +
Sbjct: 298 KDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVY 357
Query: 311 RTWIYHLCGSGNFDKAYKVF---KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
I L D+A K F K S ++P N V V + K + A ++
Sbjct: 358 CMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAV---VGAYCRSSKFQHAFKMVDE 414
Query: 368 IKK 370
++K
Sbjct: 415 MRK 417
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 102/232 (43%), Gaps = 7/232 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + + P Y + + L +R + E K + P
Sbjct: 336 DEAIKVFREMETNGCMPSPHVYC--MLINGLGSEERLDEALKYFELSKASGFPMEVPTCN 393
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ +Y ++ F HA + D+M + G + +++ +L +S+ ++ +F + K
Sbjct: 394 AVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKD 453
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P +Y +++ C + D AL++ N+M+ KGV ++ ++N L + EE
Sbjct: 454 -GCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEE 512
Query: 222 AERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKEL---IDEMRDAGLK 269
A + EM +G+ + N++ GG +E+ +DE+R ++
Sbjct: 513 ACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDELRKTPMR 564
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 128/270 (47%), Gaps = 15/270 (5%)
Query: 118 RTFDQMDELGTPRSVISFN-------ALLFACTRSRLYDKVPILFD--EIPKKYNLSPDK 168
R FD ++++ S+ F L+ +C +SR K+ FD ++ + + P
Sbjct: 5 RNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSR---KLIEAFDLLQMMRHFKFRPAF 61
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y L+ + + G SD+ L L N+M+ G EV TT++ ++G + A L E
Sbjct: 62 SAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDE 121
Query: 229 MEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
M+ D D+ YNV I + +G G + + EM+ GL PD ++Y +M CK
Sbjct: 122 MKSNTFDADIVLYNVCI-DCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+DEA +++E +E+N P A + T I +G FD+AY + + IP
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPPNV 376
++ L KK K +A + +K+ PN+
Sbjct: 241 CILTCLGKKGKTDKALRIFEEMKRDAMPNL 270
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 143/288 (49%), Gaps = 5/288 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELG 127
+R ++ R +L++ K++ + L N+ I +G+ G D A + F +M G
Sbjct: 103 IRVFSREGRVDAALSLLDEMKSNT-FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANG 161
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+++ +++ ++ D+ +F+++ + + P +Y ++ + +G D+A
Sbjct: 162 LVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQV-PCAYAYNTMIMGYGSAGKFDEA 220
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LL KG + V Y +L CL K+G ++A R++ EM++ + ++ YN+ I
Sbjct: 221 YSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGM 279
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G+ E ++ D M++AGL P+ + N ++ CK + +DEA ++EG++ CSP+
Sbjct: 280 LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
TF + I L G D AY++++ + +IP+ L+ K
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFK 387
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ + RL K+++ + ++ E C+LI G+ G D A R +++M +
Sbjct: 309 NIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLD 368
Query: 126 LGTPRSVISFNALL---FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+V+ + +L+ F C R K ++ E+ + SPD + + +G
Sbjct: 369 ADQIPNVVVYTSLIRNFFKCDRKEDGHK---MYKEMMRS-GCSPDLMLLNTYMDCVFKAG 424
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
++K L E++ +G T +Y+ +++ L K G A E L+ M+ +G LD AYN
Sbjct: 425 ETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYN 484
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I G + +L++EM+ G P ++Y ++ K + +DEA ++E + N
Sbjct: 485 TVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSN 544
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G N + + I G D+AY V +E + P+ T L++GLVK ++I EA
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604
Query: 362 KGVIRTIKK-KFPPN 375
+++K K PN
Sbjct: 605 LVCFQSMKDLKCTPN 619
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G D + F+QM ELG +V L+ +R D L DE+ K
Sbjct: 67 LIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM-KSN 125
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D + Y + + G D A + +EM+ G+ VTYT+++ L K +EA
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ +ME+ AYN I YG G + L++ R G P ++YN ++T
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMG-YGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILT 244
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C K D+A +++E ++ + PN T+ I LC +GN + A+KV P
Sbjct: 245 CLGKKGKTDKALRIFEEMKRDA-MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFP 303
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ T+ ++++ L K +K+ EA + + K
Sbjct: 304 NVRTINIMIDRLCKAQKLDEACSIFEGMDYK 334
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A I+ + SP + + + L K R D + E + +I
Sbjct: 322 DEACSIFEGMDYKVCSPDGATFCS--LIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYT 379
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR++ + + + + +M G ++ N + ++ +K LF+EI K
Sbjct: 380 SLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEI-KA 438
Query: 162 YNLSPDKISYGLLLKS-----------------------------------HCDSGSSDK 186
PD SY +L+ S C SG +K
Sbjct: 439 RGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNK 498
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A +LL EM+ G T VTY +V++ L K +EA L+ E + G++L+ Y+ I
Sbjct: 499 AYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLID 558
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G R+ E +++EM GL P+ ++N L+ K E ++EA ++ +++ C
Sbjct: 559 GF--GKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKC 616
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+PN T+ I LC F+KA+ ++E P+ T ++ GL K + +A
Sbjct: 617 TPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASS 676
Query: 364 VIRTIK 369
+ +
Sbjct: 677 LFERFR 682
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 151/356 (42%), Gaps = 40/356 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI-TQEPYL 100
D+A++I+ + ++ P + YA + + + +F + +L+E + I + Y
Sbjct: 183 DEAVEIFEQMEQNRQVPCA--YAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240
Query: 101 CNLIRSYGQAGMFDHAMRTF----------------------------------DQMDEL 126
C ++ G+ G D A+R F D M E
Sbjct: 241 C-ILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEA 299
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G +V + N ++ +++ D+ +F+ + K SPD ++ L+ G D
Sbjct: 300 GLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV-CSPDGATFCSLIDGLGKQGRVDD 358
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A + M + V YT+++ +K E+ +++ EM + G D+ N +
Sbjct: 359 AYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMD 418
Query: 247 NTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ G+ E+ + L +E++ G PDT SY+ L+ K E ++Y +++ GC
Sbjct: 419 CVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVL 478
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + T I C SG +KAY++ +E + P T +V+GL K ++ EA
Sbjct: 479 DTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEA 534
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S +AG + M + G ++N ++ +S +K L +E+ K
Sbjct: 451 LIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTM 509
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++YG ++ D+A L E ++ G+E+ V Y+++++ K G +EA
Sbjct: 510 GHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEA 569
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFLM 279
+ EM +KG+ +V +N + E + E + M+D P+ I+Y L+
Sbjct: 570 YLVMEEMMQKGLTPNVYTWNCLLDGLV--KAEEINEALVCFQSMKDLKCTPNQITYCILI 627
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK ++A ++ +++ G PN T+ I L SGN +A +F+ I
Sbjct: 628 NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGI 687
Query: 340 PDFNTVKLLVEGL 352
PD + ++EGL
Sbjct: 688 PDSASYNAMIEGL 700
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 4/247 (1%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
V LAK R + L E K++ + +LI +G+ G D A ++M + G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+V ++N LL ++ ++ + F + K +P++I+Y +L+ C +KA
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSM-KDLKCTPNQITYCILINGLCKVRKFNKA 639
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
EM+ +G++ T+TYT +++ L K GN +A L+ G D A+YN I
Sbjct: 640 FVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEG 699
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ +L +E R G T + L+ K E +++A V L E S +
Sbjct: 700 LSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLRETAKSQH 759
Query: 307 ATTFRTW 313
A R+W
Sbjct: 760 AA--RSW 764
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 130/283 (45%), Gaps = 9/283 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + ++G + A + ++M +G +V+++ +++ + D+ +LF+E K
Sbjct: 486 VIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEE-AKSN 544
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +++ Y L+ G D+A ++ EM KG+ T+ +L+ L K EA
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI--DEMRDAGLKPDTISYNFLMT 280
+ M+ + Y + I N + K + EM+ GLKP+TI+Y +++
Sbjct: 605 LVCFQSMKDLKCTPNQITYCILI-NGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMIS 663
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K+ + +A ++E +G P++ ++ I L + AY++F+E+ +
Sbjct: 664 GLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSI 723
Query: 341 DFNTVKLLVEGLVKKKKIKEAK---GVIRTIKKKFPPNVLRAW 380
T L++ L K + +++A V+R K + R+W
Sbjct: 724 HTKTCVALLDALHKAECLEQAAIVGAVLRETAK--SQHAARSW 764
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 14/292 (4%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+++ + G D A T +M V ++N ++ ++R + F+ +P+
Sbjct: 39 CYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE 98
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD ++Y LL C +G +A L ME G+ + VTYTT+++ K E
Sbjct: 99 -----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 153
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD--PERLKELIDEMRDAGLKPDTISYNFL 278
A L M + V +Y I N + ++ +L +EM+ AG KPD ++YN L
Sbjct: 154 TAYGLLQLMASRKCSPTVYSY-CSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 212
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C + + EAK + + ENG P+ TF I LC + +A+ +F+
Sbjct: 213 IHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 272
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP--PNVLRAWKKVEEELG 388
PD T +LV L +K++ A V+R +P P + + + ELG
Sbjct: 273 APDLVTHTVLVSKLCILRKLRPALSVVR----NYPACPEAVILYTPIFRELG 320
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 7/245 (2%)
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
++ NALL R+R +++ ++F I + + P+ +SY L+K+ C +G DKA +
Sbjct: 1 VTCNALLDLLERARRSEQIVVVFRRIFSQ-DCKPNALSYCYLVKALCRTGKIDKACSTIA 59
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGG 251
EM + + TY V++ L K A + M + DV YN + G
Sbjct: 60 EMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEP----DVVTYNTLLGGLCKNG 115
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ L M AG+ P ++Y L+ +CK + A + + + CSP ++
Sbjct: 116 RVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYC 175
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKK 370
+ I LC + D+AY++F+E + PD T L+ GL K+++ EAK ++ ++
Sbjct: 176 SIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVEN 235
Query: 371 KFPPN 375
F P+
Sbjct: 236 GFQPD 240
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 44/306 (14%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-C 142
L+ S K P + C++I + D A + F++M G +++N L+ C
Sbjct: 161 LMASRKCSPTVYS---YCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
+ RL++ +L + + PDKI++ L++ C + +A L M +G
Sbjct: 218 VKQRLHEAKDLLTVMVENGFQ--PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPD 275
Query: 203 TVT---------------------------------YTTVLNCLYKQGNAEEAERLWSEM 229
VT YT + L ++ + A RL +M
Sbjct: 276 LVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKM 335
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPE---RLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
++GV +V Y GD + R M + G++PD ++YN L+ +CK +
Sbjct: 336 ARRGVPPNVVTYTAFFKGL--GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAD 393
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+D A+K+ ++++G PN T+ T + H C G + ++ V + PD T
Sbjct: 394 RLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWS 453
Query: 347 LLVEGL 352
LV GL
Sbjct: 454 TLVAGL 459
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 130/308 (42%), Gaps = 5/308 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R + +L S + + LI + + F+ A M +
Sbjct: 111 LCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPT 170
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V S+ +++ ++R D+ LF+E+ K PD+++Y L+ C +A +LL
Sbjct: 171 VYSYCSIINGLCKNRKVDQAYQLFEEM-KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL 229
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
M G + +T+T ++ L +EA L+ M K+G D+ + V ++
Sbjct: 230 TVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKL--C 287
Query: 252 DPERLKELIDEMRDAGLKPD-TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+L+ + +R+ P+ I Y + + D A ++ + + G PN T+
Sbjct: 288 ILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTY 347
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ L +AY+ F+ + PD +LV+G K ++ A+ ++R + +
Sbjct: 348 TAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQ 407
Query: 371 K-FPPNVL 377
PPN++
Sbjct: 408 SGLPPNIV 415
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D+A LL +M +GV VTYT L A R + M ++G++ D+ AYNV
Sbjct: 326 DRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVL 385
Query: 245 ITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ D + E ++ M +GL P+ ++YN L+ +C+ ++ ++ + G
Sbjct: 386 VDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGR 445
Query: 304 SPNATTFRTWIYHLCGSGNFDKAY 327
P+ T+ T + L G D AY
Sbjct: 446 QPDVATWSTLVAGLFMVGQADAAY 469
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT----RSRLYDKVPILFDEI 158
+ R G+ FD A R +M G P +V+++ A R Y + + ++
Sbjct: 315 IFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQ- 373
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ PD ++Y +L+ C + D A +++ M+ G+ VTY T++ ++G
Sbjct: 374 ----GIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGK 429
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
E L M +G DVA ++ + +
Sbjct: 430 VEAIGELLHTMVSRGRQPDVATWSTLVAGLF 460
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A R F +M E G ++++N L+ ++ D + + + L P+ ++Y L
Sbjct: 362 RAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQS-GLPPNIVTYNTL 420
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ HC G + ELL+ M ++G + T++T++ L+ G A+ A
Sbjct: 421 VGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G D+ +M+E G ++++N L+ A R L + L D + K
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGK- 288
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P +Y L+ C GS ++A +L+EM G+ T+ +L ++ + EA
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
ER+++EM ++GV D+ +++ I + G+ R ++M+ GL PDT+ Y L+
Sbjct: 349 ERVFNEMLQRGVVPDLISFS-SIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILIN 407
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YC+N+ + A K+ + E GC + T+ T + LC D A ++FKE V P
Sbjct: 408 GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFP 467
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
DF T+ L+ G K + +A + T+ + P+V+
Sbjct: 468 DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVV 505
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 138/315 (43%), Gaps = 48/315 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI---- 158
LI Y + A++ ++M E G V+++N LL R ++ D LF E+
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464
Query: 159 --PKKYNLS----------------------------PDKISYGLLLKSHCDSGSSDKAL 188
P Y L+ PD ++Y L+ C G +KA
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 524
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
EL +M ++ + + ++++ ++N G EA RLW EM++KG+ + N I
Sbjct: 525 ELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGY 584
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ + + ++ M G+ PD I+YN L+ + K E D A + +EE G PN
Sbjct: 585 LRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNL 644
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI------PDFNTVKLLVEGLVKKKKIKEA 361
T+ + G F + ++ + +++HK+ PD +T L+ G V K +KEA
Sbjct: 645 VTYNAIL------GGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698
Query: 362 KGVI-RTIKKKFPPN 375
V +++ F P+
Sbjct: 699 FRVHDEMLQRGFVPD 713
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 6/323 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A +Y K + + + Y ++ V L K + ++ + +
Sbjct: 206 DLAWKVYEDFVK--SGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYN 263
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ +Y + G+ A D M G + ++NAL+ + Y++ + DE+
Sbjct: 264 TLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM-LG 322
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ ++ +L C +A + NEM +GV +++++++ + G
Sbjct: 323 VGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGR 382
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + +M+ G+ D Y + I N Y D ++ +EM + G D ++YN L+
Sbjct: 383 ALAYFEKMKGVGLVPDTVIYTILI-NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLL 441
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ +M+D+A ++++ + E G P+ T T I+ C GN KA +F+ +
Sbjct: 442 NGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLK 501
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
PD T L++G K ++++AK
Sbjct: 502 PDVVTYNTLMDGFCKVGEMEKAK 524
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R F++M + G +ISF++++ +R+ + F+++ K L PD + Y +L+
Sbjct: 348 AERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM-KGVGLVPDTVIYTILI 406
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV- 234
+C + AL++ NEM +G + VTY T+LN L + ++A+ L+ EM ++GV
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 466
Query: 235 -DL---------------------------------DVAAYNVRITNTYG-GDPERLKEL 259
D DV YN + G+ E+ KEL
Sbjct: 467 PDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKEL 526
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+M + P IS++ L+ +C ++ EA ++++ ++E G P T T I
Sbjct: 527 WYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLR 586
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+GN KA + PD T L+ VK++ A +I ++++ PN++
Sbjct: 587 AGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLV 645
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LL + G D A ++ + G V T ++N L K G + SEME+KG
Sbjct: 195 LLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKG 254
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V D+ YN + N Y G L+D M GLKP +YN L+ CK + A
Sbjct: 255 VYADLVTYNT-LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERA 313
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
K+V + + G PNA TF + C + +A +VF E + +PD
Sbjct: 314 KRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDL 364
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CN +I+ Y +AG A + M G P I++N L+ + + +D+ L + +
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME 636
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ L P+ ++Y +L G +A +L++M +KG+ TYT+++N + N
Sbjct: 637 ER-GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNM 695
Query: 220 EEAERLWSEMEKKG 233
+EA R+ EM ++G
Sbjct: 696 KEAFRVHDEMLQRG 709
>gi|326511761|dbj|BAJ92025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 3/287 (1%)
Query: 93 KITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
+I+ Y N L+R++ G A D+M + G R+V+SFN L+ A R +
Sbjct: 191 RISPNMYTANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHGGLEH 250
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ + + L+P +++Y ++ C G +A LL+EM V TVT+ T++
Sbjct: 251 ALELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIY 310
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKP 270
G+ R+ EM KKGV+LD+ YN I G ++ + L ++ L+P
Sbjct: 311 GYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDRPKLEP 370
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ +++ L+ +CK + + A ++ ++++G PN T++ I C + +F+ A V
Sbjct: 371 NASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDFEGAVDVM 430
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
KE + + PD + E L K KK+ A+ + K KF P++
Sbjct: 431 KELLEMRMAPDKVLLHEFFEALSKAKKLHLAEDLQSADKSGKFIPSI 477
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 44/311 (14%)
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
P + L + + A TF M G V S N + A + + F E
Sbjct: 127 PAIDVLFSACARGNKLSQATLTFRAMRAHGLLPRVESCNVFISAALCLKRPEIAVSFFRE 186
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV------------- 204
+ ++ +SP+ + +LL++ C G A +L+EM + GV+ T V
Sbjct: 187 M-RRCRISPNMYTANMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREH 245
Query: 205 -----------------------TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
TY T+++ L K+G +A RL SEM V + +
Sbjct: 246 GGLEHALELKKRMELEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTF 305
Query: 242 NVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
N I YG GD + +EM G++ D ++YN L+ C++ + +A+ +++
Sbjct: 306 NTLI---YGYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQ 362
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L+ PNA+TF I C + N ++A ++ P+++T K+++ K K
Sbjct: 363 LDRPKLEPNASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKD 422
Query: 358 IKEAKGVIRTI 368
+ A V++ +
Sbjct: 423 FEGAVDVMKEL 433
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A+ TF +M L P S++S N LL + +++ Y V L + K P ++
Sbjct: 36 FDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLS 95
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+ + S G A ++ ++ +G V T TT++ L +G EA L+ K
Sbjct: 96 IFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSK 155
Query: 233 GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G D Y I G EL+ +M G++P+ I YN ++ CK ++ EA
Sbjct: 156 GFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEA 215
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVE 350
+ + G + T+ + I+ CG+G F A ++ E VM + PD T +LV+
Sbjct: 216 CGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVD 275
Query: 351 GLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
L K + EA+ V IK+ P+V+
Sbjct: 276 ALCKLGMVAEARNVFGLMIKRGLEPDVV 303
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 10/313 (3%)
Query: 55 YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL---IRSYGQAG 111
+ P S + + + + K+K + + +L SH D K T +P L L I S G
Sbjct: 48 HLHPPPSIVSLNKLLSSIMKTKHYPTVVSLC-SHL-DSKGTPKPSLVTLSIFINSLTHLG 105
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
A ++ + G + L+ C + R ++ + + + K ++ D++
Sbjct: 106 QMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSF--DEVC 163
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
YG L+ C G + A+ELL +ME GV + Y V++ L K+G EA L SEM
Sbjct: 164 YGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMV 223
Query: 231 KKGVDLDVAAYNVRITNTYG-GDPERLKELIDEM-RDAGLKPDTISYNFLMTCYCKNEMM 288
KG+ +DV YN I G G + L++EM ++PD ++N L+ CK M+
Sbjct: 224 GKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMV 283
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
EA+ V+ + + G P+ + + C G +A +VF V K+P+ + L
Sbjct: 284 AEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTL 343
Query: 349 VEGLVKKKKIKEA 361
+ G K K + EA
Sbjct: 344 INGYCKVKMVDEA 356
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 4/279 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFACTRSRLYDKVPILFDEIPK 160
+LI + AG F A+R ++M R V +FN L+ A + + + +F + K
Sbjct: 236 SLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIK 295
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ L PD +S L+ C G +A E+ + M +G ++Y+T++N K +
Sbjct: 296 R-GLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVD 354
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA RL +EM ++ + D YN + + G +L++ MR +G PD I+YN L+
Sbjct: 355 EALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLL 414
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K E +D+A +++ + + G SPN T+ I LC G A ++F+ +
Sbjct: 415 DDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCR 474
Query: 340 PDFNTVKLLVEGLVKK-KKIKEAKGVIRTIKKKFPPNVL 377
P+ T +++ GL ++ + ++ + FPPN +
Sbjct: 475 PNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAV 513
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 143/308 (46%), Gaps = 5/308 (1%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDE 125
+ VRRL+ + L+ T + C L+ Y ++G A R FD M
Sbjct: 7 VAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPR 66
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
LG + ++F AL+ +K LF+++ + + P+ +Y +L+ C +G +
Sbjct: 67 LGLTPNEVTFTALIHGYFIHGRREKGLALFEKM-RIGGIEPNLYTYNILVGEWCRTGEFE 125
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A L EM KG+ V+Y T++ L + ++A +L M ++G+ V +N+ +
Sbjct: 126 RARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNL-L 184
Query: 246 TNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+ YG G ++MR AG +P ++YN L+ +C+ M A + + ++E G
Sbjct: 185 VDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGL 244
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+P T+ I + DKA+++F D T +LV L + +K+A+
Sbjct: 245 APTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARK 304
Query: 364 VIRTIKKK 371
+ ++I +K
Sbjct: 305 LFQSIGEK 312
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 141/307 (45%), Gaps = 11/307 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
+A+++R D+ + N+ T LI Y G + + F++M G +
Sbjct: 54 VAEAQRVFDVMPRLGLTPNEVTFTA------LIHGYFIHGRREKGLALFEKMRIGGIEPN 107
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+ ++N L+ R+ +++ +LF+E+P K ++ + +SY L+ C A +LL
Sbjct: 108 LYTYNILVGEWCRTGEFERARLLFEEMPAK-GITRNVVSYNTLIAGLCRYRKMKDATQLL 166
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
M +G+ + VT+ +++ K G A ++M G YN I
Sbjct: 167 ELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRA 226
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
D R +M++ GL P ++Y L+ + + MD+A +++ G+E+ G + T+
Sbjct: 227 RDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTY 286
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV-KLLVEGLVKKKKIKEAKGVIRTIK 369
++ LC GN A K+F +S+ + N + +L+ G ++ +A +I ++
Sbjct: 287 GVLVHALCMEGNMKDARKLF-QSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMR 345
Query: 370 KK-FPPN 375
KK F PN
Sbjct: 346 KKGFVPN 352
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 4/233 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L + ++ D L+E + + L+ YG+AG +A+ +QM G S
Sbjct: 153 LCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPS 212
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+++NAL+ R+R + F ++ K+ L+P K++Y +L+ + DKA E+
Sbjct: 213 AVTYNALIAGFCRARDMIRANRAFSDM-KERGLAPTKVTYTILIDAFARENDMDKAFEMF 271
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
ME G+EV TY +++ L +GN ++A +L+ + +KG+ + Y++ I YG
Sbjct: 272 AGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYG-YGR 330
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
G + +LI EMR G P++ SY + C + EA+ + + + G
Sbjct: 331 EGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAG 383
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR-LYDKVPILFDEIPKK 161
L+ + + G F+ A F++M G R+V+S+N L+ R R + D +L E+ ++
Sbjct: 114 LVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLL--ELMRR 171
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P +++ LL+ + +G AL N+M G + + VTY ++ + +
Sbjct: 172 EGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIR 231
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R +S+M+++G+ Y + I D ++ E+ M AGL+ D +Y L+
Sbjct: 232 ANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVH 291
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C M +A+K+++ + E G + IY G+ KA K+ E +P
Sbjct: 292 ALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVP 351
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
+ + L + L K EA+ +I
Sbjct: 352 NSASYGLTIRILCNDGKCSEAEALI 376
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 213 LYKQGNAEEAERLWSEMEKKG-VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKP 270
L G A L + K G LDVAA + GD + + D M GL P
Sbjct: 12 LSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTP 71
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ +++ L+ Y + ++ ++E + G PN T+ + C +G F++A +F
Sbjct: 72 NEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLF 131
Query: 331 KE---SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+E + + +NT L+ GL + +K+K+A ++ ++++ P+V+
Sbjct: 132 EEMPAKGITRNVVSYNT---LIAGLCRYRKMKDATQLLELMRREGIRPSVV 179
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ + D A F M++ G V ++ L+ A C + D LF I +K
Sbjct: 254 LIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARK-LFQSIGEK 312
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L + Y +L+ + GSS KA++L+ EM KG + +Y + L G E
Sbjct: 313 -GLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSE 371
Query: 222 AERLWSEMEKKGV 234
AE L +M + GV
Sbjct: 372 AEALIDDMVRAGV 384
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Query: 104 IRSYG-------QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
+R+YG G A + F + E G + ++ L++ R K L
Sbjct: 283 VRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIM 342
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ KK P+ SYGL ++ C+ G +A L+++M GV+ + +LN +Q
Sbjct: 343 EMRKK-GFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQ 401
Query: 217 GN 218
G+
Sbjct: 402 GS 403
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G D AM+ M G ++++N LL C + D+ L + + +
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS- 288
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKA-LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD SY LLK C + D+A L ++ M+ KG+ V+Y TV+ K +
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRK 347
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM KG+ D+ +N+ I G +K+L+DEM + PD I Y ++
Sbjct: 348 GYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVD 407
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN +D A V+ + ENG +P+ ++ + C + A +F E P
Sbjct: 408 HLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYP 467
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
D T KL+V GL++ KKI A
Sbjct: 468 DEVTYKLIVGGLIRGKKISLA 488
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 10/340 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ AL+++ S+ P Y + + L +KRF D + D ++ + C
Sbjct: 136 ETALELFHSMPSKGRDPDVVSYT--IIIDALCNAKRF-DEAAKVWRRLIDKGLSPDYKAC 192
Query: 102 -NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
L+ G D A + + G + + +NAL+ R DK +
Sbjct: 193 VALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDK-AMKIKAFMS 251
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD ++Y +LL C+ G D+A+ L+ ME GVE +Y +L K +
Sbjct: 252 RTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVD 311
Query: 221 EAERLWSE-MEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFL 278
A + E M+ KG+ DV +YN IT R EL +EM G++PD +++N L
Sbjct: 312 RAHLMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNIL 370
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + + KK+ + + + P+ + + HLC +G D A+ VF++ V
Sbjct: 371 IDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGV 430
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
PD + L+ G K ++ +A + ++ K +P V
Sbjct: 431 NPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEV 470
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 102 NLIRSYG-QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N++ +Y + GM D A+R + M+ G + S+N LL ++ + D+ ++ E +
Sbjct: 263 NILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQ 322
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ D +SY ++ + C + + K EL EM KG+ VT+ +++ ++G+
Sbjct: 323 TKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTH 381
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
++L EM K V D Y + + G + + +M + G+ PD ISYN L+
Sbjct: 382 VVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALL 441
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+CK + +A +++ ++ G P+ T++ + L A +V+ +
Sbjct: 442 NGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQ 494
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 39/292 (13%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLY--------DKVPILFDEIP 159
+AG+ + A+ FDQM E + +N + R SRL+ +P F +P
Sbjct: 22 KAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLP 81
Query: 160 KKYN-----------------------------LSPDKISYGLLLKSHCDSGSSDKALEL 190
Y+ PD ++ L C + ALEL
Sbjct: 82 FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV-AAYNVRITNTY 249
+ M +KG + V+YT +++ L +EA ++W + KG+ D A + +
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
GG + EL+ + G+K +++ YN L+ +C+ +D+A K+ + GC P+ T
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVT 261
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + + C G D+A ++ + PD + L++G K + A
Sbjct: 262 YNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRA 313
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 6/207 (2%)
Query: 103 LIRSYGQAGMFDHA-MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L++ + +A M D A + ++M G V+S+N ++ A ++R K LF+E+ K
Sbjct: 300 LLKGFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYELFEEMCGK 358
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +++ +L+ + GS+ +LL+EM V + YT V++ L K G +
Sbjct: 359 -GIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDV 417
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLM 279
A ++ +M + GV+ DV +YN + N + + L DEM+ GL PD ++Y ++
Sbjct: 418 AHSVFRDMVENGVNPDVISYNA-LLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIV 476
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + + A +V++ + E G + N
Sbjct: 477 GGLIRGKKISLACRVWDQMMERGFTLN 503
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 123 MDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
MD LG + +FN L C ++RL + LF +P K PD +SY +++ + C++
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALE-LFHSMPSK-GRDPDVVSYTIIIDALCNA 167
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
D+A ++ + +KG+ ++ L G + A L + K GV ++ Y
Sbjct: 168 KRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVY 227
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N I G ++ ++ M G PD ++YN L+ C+ M+DEA ++ E +E
Sbjct: 228 NALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMER 287
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+G P+ ++ + C + D+A+ + E + + D + ++ K ++ ++
Sbjct: 288 SGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRK 347
Query: 361 A 361
Sbjct: 348 G 348
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 8/204 (3%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS-EMEKKGVDLDVA 239
+G ++A+ L ++M V +V Y + L + A + + +G L
Sbjct: 23 AGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPF 82
Query: 240 AYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
Y+ R + P + L+ +M G PD ++N + C+ ++ A ++
Sbjct: 83 TYS-RFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + G P+ ++ I LC + FD+A KV++ + PD+ LV GL
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 355 KKKIKEA-KGVIRTIKKKFPPNVL 377
++ A + V+ IK N L
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVNSL 225
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 132/251 (52%), Gaps = 2/251 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + FD+M E G +++++N L+ R ++ + D++ K ++P+ I+Y L+
Sbjct: 287 AFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSDGINPNLITYNTLI 345
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C G KAL L +++++G+ + VTY +++ K+G+ A ++ EME++G+
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405
Query: 236 LDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
Y + I T + E+ +L M + GL PD +Y+ L+ +C M+EA ++
Sbjct: 406 PSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
++ + PN + T + C G+ +A ++F+E P+ + + ++E L K
Sbjct: 466 FKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525
Query: 355 KKKIKEAKGVI 365
++K KEA+G++
Sbjct: 526 ERKSKEAEGLV 536
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 38/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +Y Q+ D ++ F++M + G FN LL S +++ F+E K
Sbjct: 100 MINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKV 159
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L D S+G+++K C++G +K+ +LL E+ G V YTT+++ K+G E+A
Sbjct: 160 DL--DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA 217
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--------ERLKE---------------- 258
+ L+ EM K G+ + Y V I + E+++E
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 259 ------------LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
L DEMR+ G+ + ++YN L+ C+ +EA KV + ++ +G +PN
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ T I CG G KA + ++ P T +LV G KK A V++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 367 TIKKK 371
++++
Sbjct: 398 EMEER 402
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 139/277 (50%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G+ +++M E G ++ ++N ++ C R D LFDE+ ++
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFK-LFDEMRER 297
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + ++Y L+ C +++A +++++M++ G+ +TY T+++ G +
Sbjct: 298 -GVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGK 356
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +++ +G+ + YN+ ++ GD +++ EM + G+KP I+Y L+
Sbjct: 357 ALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILID 416
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + + M++A ++ +EE G +P+ T+ I+ C G ++A ++FK V P
Sbjct: 417 TFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEP 476
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
+ +V G K+ A + R + +K+ PPNV
Sbjct: 477 NKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNV 513
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 4/207 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A + DQM G ++I++N L+ C +L + + D K LSP ++Y
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD--LKSRGLSPSLVTYN 377
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L+ C G + A +++ EME +G++ + +TYT +++ + N E+A +L S ME+
Sbjct: 378 ILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL 437
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G+ DV Y+V I G L M L+P+ + YN ++ YCK A
Sbjct: 438 GLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRA 497
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLC 318
+++ +EE PN ++R I LC
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLC 524
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ + + A++ M+ELG V +++ L+ C + ++ + + + KK
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+K+ Y ++ +C GSS +AL L EME K + +Y ++ L K+ ++E
Sbjct: 474 --LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531
Query: 222 AERLWSEMEKKGVD 235
AE L +M G+D
Sbjct: 532 AEGLVEKMIDTGID 545
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG D A+ M G ++++N LL C ++++ L ++
Sbjct: 226 LISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECS- 284
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKA-LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD SY LLK+HC + DKA L ++ +M KG V+Y T++ N
Sbjct: 285 AIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF-CDVVSYNTIIKAFCSISNNRR 343
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L+ EM +KG+ DV + + I G+ + K+L+D M GL PD I Y ++
Sbjct: 344 AYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIID 403
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK+ ++ A ++ + E G +P+ ++ I C S + ++++ + P
Sbjct: 404 HHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFP 463
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
D T KL++ LV++ K+ +A
Sbjct: 464 DEVTYKLIIGALVRENKLSDA 484
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 6/224 (2%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF--DEIPKKYNLSPDKI 169
MF+ A++ +M+ V S+N LL A ++ DK + +PK + D +
Sbjct: 270 MFEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF---CDVV 326
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
SY ++K+ C ++ +A +L EM KG+ VT+T ++ ++GN++ A++L M
Sbjct: 327 SYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLM 386
Query: 230 EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
G+ D Y I + G E + +M + G+ PD +SYN L+ +CK+ +
Sbjct: 387 AGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRV 446
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
E +YE + + G P+ T++ I L A +V+ +
Sbjct: 447 GEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQ 490
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 3/222 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A + +M LG S +++ + +++ + + L ++ +K + PD ++
Sbjct: 60 FDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDM-EKLHCVPDIWAFN 118
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+ L + ALE+ M +G E VT+T +++ L K + A + W M K
Sbjct: 119 IYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDK 178
Query: 233 GVDLD-VAAYNVRITNTYGGDPERLKELIDEMRDAGL-KPDTISYNFLMTCYCKNEMMDE 290
G+ D A + + GG + ELI + GL + T+ YN L++ +C+ +D+
Sbjct: 179 GIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDK 238
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
A + + GC P+ T+ + + C F++A K+ K+
Sbjct: 239 ALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKK 280
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 38/246 (15%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+ Y L+ C +G DKAL +++ M G + VTY +LN + EEA +L +
Sbjct: 221 LVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKK 280
Query: 229 MEKKGVDLDVAAYNVRI-TNTYGGDPE--------------------------------- 254
ME ++ DV +YN + + P+
Sbjct: 281 MECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISN 340
Query: 255 --RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
R +L +EM G+ PD +++ L+ + + D AKK+ + + G P+ + T
Sbjct: 341 NRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTT 400
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
I H C SG + A+ +F + V PD + L+ G K ++ E + + ++
Sbjct: 401 IIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRG 460
Query: 372 -FPPNV 376
FP V
Sbjct: 461 SFPDEV 466
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 96/180 (53%), Gaps = 18/180 (10%)
Query: 132 VISFNALLFA-CTRS---RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
V+S+N ++ A C+ S R Y LF+E+ +K ++PD +++ +L+K+ G+SD A
Sbjct: 325 VVSYNTIIKAFCSISNNRRAYK----LFEEMGRK-GIAPDVVTFTILIKAFLREGNSDMA 379
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+LL+ M G+ + YTT+++ K G E A ++ +M +KG+ DV +YN I
Sbjct: 380 KKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALIN- 438
Query: 248 TYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
G + L+ L ++M G PD ++Y ++ + + +A +V++ + E G
Sbjct: 439 ---GFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERG 495
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI+++ + G D A + D M +G I + ++ C ++ I D + K
Sbjct: 366 LIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEK- 424
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD +SY L+ C S + + L +M +G VTY ++ L ++ +
Sbjct: 425 -GITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSD 483
Query: 222 AERLWSEMEKKGVDLD 237
A R+W +M ++G+ LD
Sbjct: 484 ACRVWDQMMERGLTLD 499
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 138/267 (51%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + G+A F R D+M + G + +++N L+ + R+ ++ +F ++ ++
Sbjct: 355 MVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQM-QEA 413
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD+++Y L+ H +G D A+++ M+ G+ T TY+ ++NCL K G+ A
Sbjct: 414 GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAA 473
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL+ EM +G ++ +N+ I + + E +L +M++AG +PD ++Y+ +M
Sbjct: 474 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 533
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
++EA+ V+ ++ P+ + + +GN +KA++ ++E + P+
Sbjct: 534 LGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPN 593
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T L+ ++ ++ EA +++++
Sbjct: 594 VPTCNSLLSTFLRVHRMSEAYNLLQSM 620
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNT 248
LL+EM G + TVTY +++ + EA ++ +M++ G + D Y I +
Sbjct: 371 LLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHA 430
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G + ++ M+ AGL PDT +Y+ ++ C K + A +++ + GC+PN
Sbjct: 431 KAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 490
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
TF I + N++ A K++++ PD T +++E L ++EA+GV +
Sbjct: 491 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 550
Query: 369 KKK-FPP----------------NVLRAWKKVEEEL--GLVP 391
++K + P NV +AW+ +E L GL P
Sbjct: 551 QRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRP 592
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID--- 261
TYTT++ L + RL EM K G + YN R+ ++Y G L E ++
Sbjct: 351 TYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYN-RLIHSY-GRANYLNEAMNVFK 408
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M++AG +PD ++Y L+ + K +D A +Y+ ++ G SP+ T+ I L +G
Sbjct: 409 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAG 468
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAW 380
+ A+++F E V P+ T +++ K + + A + R ++ F P+ + +
Sbjct: 469 HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKV-TY 527
Query: 381 KKVEEELG 388
V E LG
Sbjct: 528 SIVMEVLG 535
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 3/205 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A+D+Y + SP + Y+ + + L K+ L
Sbjct: 436 DIAMDMYQRMQAAGLSPDTFTYS--VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 493
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + +A ++ A++ + M G ++++ ++ ++ +F E+ +K
Sbjct: 494 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 553
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N PD+ YGLL+ +G+ +KA + EM + G+ T ++L+ + E
Sbjct: 554 -NWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSE 612
Query: 222 AERLWSEMEKKGVDLDVAAYNVRIT 246
A L M G+ + Y + ++
Sbjct: 613 AYNLLQSMLALGLHPSLQTYTLLLS 637
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 22/327 (6%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
S++ S + + F+PD +Y+ S A + RY + + V +
Sbjct: 15 SVAASLLNNLHKDGFEPD----VYAYTSLITACVSNGRYREAVMVFKK------------ 58
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACT 143
+E P + + N+ YG+ GM ++ F+ M G ++N L+ C
Sbjct: 59 MEEEGCKPTLITYNVILNV---YGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCR 115
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R LY++ +F+++ K PDK++Y LL + S +A+E+L EME G +
Sbjct: 116 RGSLYEEAAAVFEDM-KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSI 174
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDE 262
VTY ++++ + G EEA L ++M ++G+ LDV Y ++ G E + +E
Sbjct: 175 VTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEE 234
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
MR AG KP+ ++N L+ + E KV+E ++ C P+ T+ T + +G
Sbjct: 235 MRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGM 294
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLV 349
+ VFKE V +P+ +T L+
Sbjct: 295 DSEVSGVFKEMKRVGFVPERDTYNTLI 321
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 8/278 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPK 160
+LI + G + A+ F +M+E G ++I++N +L + + ++K+ LF+ + K
Sbjct: 38 SLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGM-K 96
Query: 161 KYNLSPDKISYGLLLKSHCDSGS-SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ PD+ +Y L+ + C GS ++A + +M++ G VTY T+L+ K
Sbjct: 97 NAGILPDEYTYNTLI-TCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRI 155
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNF 277
+EA + EME G + YN I+ Y D E EL ++M + G+K D +Y
Sbjct: 156 KEAIEVLREMEVNGCSPSIVTYNSLIS-AYARDGLLEEAMELKNQMVERGIKLDVFTYTA 214
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+++ + + + A +V+E + GC PN TF I G F + KVF+E +
Sbjct: 215 MLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICC 274
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPP 374
+PD T L+ + E GV + +K+ F P
Sbjct: 275 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVP 312
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 141/312 (45%), Gaps = 38/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y + G FD AM + +M + G + ++NA+L A R L+++ + E+
Sbjct: 320 LISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGM 379
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+++++ LL ++ + + L L E+ + +E V T++ K EA
Sbjct: 380 -CKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEA 438
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-----------TN----------------TYGG---- 251
ER + E+++KG D++ N I TN TY
Sbjct: 439 ERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYM 498
Query: 252 -----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ ER +E++ E+ G+KPD ISYN ++ YC+N M EA ++ + E+G P+
Sbjct: 499 HSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPD 558
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ T++ F++A V + P+ NT +++G K + +A I
Sbjct: 559 VITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFIS 618
Query: 367 TIKKKFPPNVLR 378
++ + P++ R
Sbjct: 619 SL-HELDPHISR 629
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
++ I L E KN + E LI + +++ A F+ M +G +++N
Sbjct: 85 WNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNT 144
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
LL +SR + + E+ SP ++Y L+ ++ G ++A+EL N+M +
Sbjct: 145 LLDVYGKSRRIKEAIEVLREMEVN-GCSPSIVTYNSLISAYARDGLLEEAMELKNQMVER 203
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPER 255
G+++ TYT +L+ + G E A R++ EM G ++ +N +++ G E
Sbjct: 204 GIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEM 263
Query: 256 LK----------------------------------ELIDEMRDAGLKPDTISYNFLMTC 281
+K + EM+ G P+ +YN L++
Sbjct: 264 MKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISA 323
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
Y + D+A +Y+ + + G +P+ +T+ + L G ++++ K+ E
Sbjct: 324 YSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAE 374
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 144/322 (44%), Gaps = 43/322 (13%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+P +C LI+ +G G F M+ F+++ ++++N LL ++ + +V
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSG 300
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F E+ K+ P++ +Y L+ ++ GS D+A+ + M + G+ TY VL L
Sbjct: 301 VFKEM-KRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAAL 359
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE------------------- 254
+ G E++E++ +EM+ G+ + + + Y E
Sbjct: 360 ARGGLWEQSEKILAEMQ-DGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPH 418
Query: 255 --RLKELI----------------DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
LK L+ E++ G PD + N ++ Y + +M+ + ++
Sbjct: 419 AVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILN 478
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
++E+G +P+ T+ + +Y S NF+++ +V KE + PD + ++ +
Sbjct: 479 FMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNG 538
Query: 357 KIKEAKGVIRTIKKK-FPPNVL 377
++KEA + +++ P+V+
Sbjct: 539 RMKEASHIFSEMRESGLIPDVI 560
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDA 266
++N L K+G A L + + K G + DV AY IT R ++ +M +
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 267 GLKPDTISYNFLMTCYCKNEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN-FD 324
G KP I+YN ++ Y K M ++ ++EG++ G P+ T+ T I C G+ ++
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLI-TCCRRGSLYE 121
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+A VF++ + +PD T L++ K ++IKEA V+R ++
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREME 166
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + Q+ F+ + ++ G +IS+N ++FA R+ + +F E+ ++
Sbjct: 494 SLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEM-RE 552
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD I+Y + S+ ++A++++ M G + TY +V++ K ++
Sbjct: 553 SGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDD 612
Query: 222 AERLWSEMEK 231
A + S + +
Sbjct: 613 AIKFISSLHE 622
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 164/340 (48%), Gaps = 14/340 (4%)
Query: 41 PDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRF---SDIETLIESHKNDPKI-TQ 96
PDK ++ ++ Y SS D + LA K+F +D ++ + P + +
Sbjct: 128 PDK---LFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESC 184
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
YL +L+ + D A+ + +M +V + N ++ A +S +K +F+
Sbjct: 185 NAYLSSLLDLH----RVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFE 240
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ + +SP+ SY L+ +C G + A++L N M KGVE VT+ ++++ K+
Sbjct: 241 EM-ESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKE 299
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISY 275
G EA +++SEM+ V + YN I ++ G+ E + L +EM G+K D ++Y
Sbjct: 300 GKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTY 359
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ CK +A + + L++ PNA+TF I C N D+A++++K V
Sbjct: 360 NALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVR 419
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
+ P+ T +LV K + + A V+ ++ F P
Sbjct: 420 IGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTP 459
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 140/294 (47%), Gaps = 8/294 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL Y + + SP + Y +++ +R KS + + E ++ +
Sbjct: 198 DIALAFYKEMRRCRISP--NVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYN 255
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI Y + G+ + A++ + M G +V++FN+L+ C +L++ + F E+ K
Sbjct: 256 TLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKV-FSEM-K 313
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N++P+ I+Y L+ H G+S+ L EM GV+ +TY ++ L K+G +
Sbjct: 314 VLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTK 373
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A + E++K+ + + + ++ I+ + +R +L M G P+ ++N L+
Sbjct: 374 KAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLV 433
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH-LCGSGNFDKAYKVFKE 332
+ +CKNE + A V + E +P + + IYH LC G A K+ E
Sbjct: 434 SAFCKNEDFEGAFLVLMEMFERCFTPGSDVL-SEIYHGLCCCGKEHLAMKLSSE 486
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 70/325 (21%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
F A+ FDQM E+G VI+FN L+ C R+ + ++ + K L D ++Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK--GLHIDVVTY 264
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
G ++ C G + AL LL++ME ++ V Y+ +++ L K G+ +A+ L+SEM +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 232 KGVDLDVAAYNVRITN--TYG--GDPERL------------------------------- 256
KG+ +V YN I ++G D +RL
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 257 -KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-------------------- 295
++L DEM + PDT++YN ++ +CK+ D+AK ++
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 296 -----EGLE------ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
EG++ G N TT+ T I+ C N + A +F+E + PD T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIK 369
+L+ G + +K++EA + I+
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQ 529
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 12/333 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL++ S + + + P Y+ + RL K SD + L S + I +
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSA--IIDRLCKDGHHSDAQYLF-SEMLEKGIAPNVF 332
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N +I + G + A R M E V++FNAL+ A + + L DE+
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ + PD ++Y ++ C D A + + M + V VT+ T+++ +
Sbjct: 393 LHRC-IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDVYCRAKR 447
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
+E +L E+ ++G+ + YN I D ++L EM G+ PDTI+ N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +C+NE ++EA +++E ++ + + + I+ +C D+A+ +F S+ +H
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC-SLPIH 566
Query: 338 KI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ PD T +++ G K I +A + +K
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 24/277 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + ++ TF ++ +LG V++FN LL L D I +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC----------LEDRISEAL 196
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + G L +A+ L ++M G+ +T+ T++N L +G EA
Sbjct: 197 ALFGYMVETGFL-----------EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L ++M KG+ +DV Y + GD + L+ +M + +KPD + Y+ ++
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ +A+ ++ + E G +PN T+ I C G + A ++ ++ + PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
T L+ VK+ K+ EA+ + + + FP V
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 7/257 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
K RF D + + + + +T +I Y +A D M+ ++ G +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVTFN----TIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++N L+ + LF E+ + + PD I+ +LL C++ ++ALEL
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMIS-HGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
++ +++ TV Y +++ + K +EA L+ + GV+ DV YNV I+ G
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 252 DP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
L +M+D G +PD +YN L+ K +D++ ++ + NG S +A T
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Query: 311 RTWIYHLCGSGNFDKAY 327
+ + L G DK++
Sbjct: 646 K-MVADLITDGRLDKSF 661
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
S+ +L+K CD +L ++ G + VT+ T+L+ L + EA L+ M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 230 EKKGVDLDVAAYN---------VRIT-NTY------GGDPERLKELIDEMRDAGLKPDTI 273
+ G VA ++ V IT NT G L+++M GL D +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y ++ CK A + +EE P+ + I LC G+ A +F E
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ P+ T +++G + +A+ ++R I+++ P+VL
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 21/214 (9%)
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S D A++ + M T V V+ + + A L+ +ME + + L++ ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 243 VRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD---------- 289
+ I D +L ++ G +PD +++N L+ C + +
Sbjct: 146 ILIKCF--CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 290 -----EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
EA +++ + E G +P TF T I LC G +A + + V D T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+V G+ K K A ++ +++ P+V+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 110 AGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI 169
AG D AM M E G S+I+FN+++ A +++ L DK + ++ + L+P
Sbjct: 454 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY-KLMVHFGLTPSPS 512
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+ LL +G +A EL+ +M KG+ V + +T +L+ +K+G+ A+ LW EM
Sbjct: 513 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 572
Query: 230 EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
E++G+ DV A++ I + G E + EM GL P+ +YN L+ +CK +
Sbjct: 573 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 632
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+EA K+ + + G P+ T I LC G A VF + PD T L
Sbjct: 633 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 692
Query: 349 VEGLVKKKKIKEAKGVI 365
+ G K + A ++
Sbjct: 693 INGYCKAFDMVNADNLV 709
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 132/315 (41%), Gaps = 39/315 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++I +Y QAG+ D A + M G TP + L+ RL + ++ I K
Sbjct: 481 SVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEK 540
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
LS + +++ +LL G A L EME +G+ V ++ ++ L KQG E
Sbjct: 541 --GLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 598
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI------------------------------TNTYG 250
EA ++ EM +KG+ + AYN I TN
Sbjct: 599 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 658
Query: 251 GD---PERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G R++ I+ +M GL PD I+YN L+ YCK M A + + +G +
Sbjct: 659 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 718
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ TT+ I+ C S ++A + E V +P+ T ++ G+ +
Sbjct: 719 PDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILT 778
Query: 365 IRTIKKKFPPNVLRA 379
R +K F PNV+ A
Sbjct: 779 ARLLKMAFVPNVVTA 793
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 38/248 (15%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K++ P+ +Y +++ + C G + AL N M +G T VT+ TV+N K+GN
Sbjct: 294 KFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVV 353
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA +L+ +++ G + YN + N Y + ++ L +EMR G+ PD I++N L
Sbjct: 354 EARKLFDGLKEMGFSPNAIMYNT-LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNIL 412
Query: 279 MTCY-----------------------------------CKNEMMDEAKKVYEGLEENGC 303
++ + C +DEA + + E G
Sbjct: 413 VSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGL 472
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
SP+ F + I +G DKA++ +K V P +T L+ GL +++EA
Sbjct: 473 SPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATE 532
Query: 364 VIRTIKKK 371
+I + +K
Sbjct: 533 LIGQMIEK 540
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 125/279 (44%), Gaps = 5/279 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+R++ A M A+ +M E+G S L R Y V LF ++ ++
Sbjct: 201 SLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRR 260
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P K ++ ++ C G LL+ M E Y V+N +G +
Sbjct: 261 -GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSD 319
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A ++ M ++G + V +N + N + G+ ++L D +++ G P+ I YN LM
Sbjct: 320 ALAWFNLMIERGCNPTVVTFNT-VINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLM 378
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K +D+A +YE + + G +P+ TF + G + ++ K+ ++ +
Sbjct: 379 NGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLL 438
Query: 340 PDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNVL 377
PD + + V GL ++ EA + ++ ++K P+++
Sbjct: 439 PDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSII 477
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 133/297 (44%), Gaps = 38/297 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+ F+ M E G +V++FN ++ A + + LFD + K+ SP+ I Y L+
Sbjct: 320 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL-KEMGFSPNAIMYNTLM 378
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ D+A L EM KG+ +T+ +++ YK G E+ +RL ++ G+
Sbjct: 379 NGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLL 438
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D + +++ ++ + G + E + +M + GL P I++N ++ Y + + D+A +
Sbjct: 439 PDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEA 498
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-------------SVMVHKI-- 339
Y+ + G +P+ +T + + L +G +A ++ + +V++ K
Sbjct: 499 YKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFK 558
Query: 340 --------------------PDFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPN 375
PD ++GL K+ ++EA V + ++K PN
Sbjct: 559 RGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPN 615
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 38/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I ++ ++ + + A+ F+QM G +FN LL +S ++K +F+E K
Sbjct: 101 IINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE--TKG 158
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ D S+G+++K C+ G DK E+L +ME G+ V YTT+++ K G+ E
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 218
Query: 223 ERLWSEM------------------------EKKGVDL-----------DVAAYNVRITN 247
++L+ +M +K G++L +V YN I
Sbjct: 219 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 278
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G EL DEMR+ G+ + ++YN L+ C+ + EA+++ ++ +G SPN
Sbjct: 279 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPN 338
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
++ T I C GN DKA +F + + P T +L+ G + K ++R
Sbjct: 339 LISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVR 398
Query: 367 TIKKK 371
++ +
Sbjct: 399 EMEAR 403
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 4/275 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G ++A FD+M E G +V+++N L+ + R + L + K+ LSP+ IS
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM-KRDGLSPNLIS 341
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ +C G+ DKA L N+M++ G + TY ++ + N+ + EME
Sbjct: 342 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 401
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+G+ Y + + D E+ ++ M AGL D Y L+ C M
Sbjct: 402 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 461
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA K+++ L+E PN + T IY C G+ +A ++ KE +P+ + +
Sbjct: 462 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 521
Query: 350 EGLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKV 383
+ L K +K EA+ +++ I+ P++ W +
Sbjct: 522 QILCKDEKWTEAEVLLKDMIELGLKPSI-SIWNMI 555
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 161/379 (42%), Gaps = 40/379 (10%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
+ +RS+ P++AL ++ + P S+ + L + L KS F + K +
Sbjct: 104 AHVRSQL-PEQALFYFNQMIGRGLVPGSNTFNNLLIL--LIKSNFFEKAWRVFNETKGNV 160
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
K+ + +I+ + G D QM+E+G +V+ + L+ C ++ ++
Sbjct: 161 KLDVYSFGI-MIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 219
Query: 153 ILF------DEIPKKY----------------------------NLSPDKISYGLLLKSH 178
LF D + +Y + P+ +Y ++
Sbjct: 220 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C+ G + A EL +EM +GV VTY T++ L ++ EAERL M++ G+ ++
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 339
Query: 239 AAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+YN I G+ ++ L ++M+ +G P +YN L+ + + + +
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 399
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+E G SP+ T+ + L S N +KA++++ + D +L+ GL
Sbjct: 400 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 459
Query: 358 IKEAKGVIRTI-KKKFPPN 375
+KEA + +++ + PN
Sbjct: 460 MKEASKLFKSLDEMHLKPN 478
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI---ESHKNDP-KITQE 97
DKA +++ + SP + Y ++ + +++K + + ++ E+ P K+T
Sbjct: 356 DKASSLFNQMKSSGQSPSLATY--NILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 413
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+ L+RS + A + + M++ G + + L+ + LF
Sbjct: 414 ILMDALVRSDN----IEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 469
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + + L P+ + Y ++ +C GSS +AL LL EM G+ +Y + + L K
Sbjct: 470 LDEMH-LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDE 528
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNV 243
EAE L +M + G+ ++ +N+
Sbjct: 529 KWTEAEVLLKDMIELGLKPSISIWNM 554
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 133/271 (49%), Gaps = 2/271 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ + + A+ D+M E+G ++++NA++ + +++ + F EI +K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y L+ C+S A LL++M K + +TY+ +L+ K G E
Sbjct: 220 -GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ L+ EM + +D D+ Y+ + D + ++ D M G D +SYN L+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK + +++ K++ + + G N T+ T I +G+ DKA + F + P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T +L+ GL ++++A + ++K+
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 8/312 (2%)
Query: 64 AQDLTVRRLAKSKRFSDIETL---IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
A + + L K+KR +D IE P + L N + + A R
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN---GLCNSSRWSDAARLL 248
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
M + +VI+++ALL A ++ + LF+E+ + ++ PD ++Y L+ C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSIDPDIVTYSSLVNGLCL 307
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
D+A ++ + M +KG V+Y T++N K E+ +L+ EM ++G+ +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 241 YNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YN I + GD ++ +E +M G+ PD +YN L+ C N +++A ++E ++
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ + T+ T I +C +G ++A+ +F + PD T ++ GL K +
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 360 EAKGVIRTIKKK 371
E + + +K++
Sbjct: 488 EVEALYTKMKQE 499
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYD 149
DP I L N + + + D A + FD M G V+S+N L+ C R+ D
Sbjct: 292 DPDIVTYSSLVNGLCLHDR---IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ LF E+ ++ L + ++Y L++ +G DKA E ++M+ G+ TY +
Sbjct: 349 GMK-LFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGL 268
L L G E+A ++ +M+K+ +DLD+ Y I G E L + GL
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVY-----EGLEENGCS 304
KPD ++Y +M+ C ++ E + +Y EGL +N C+
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 41/279 (14%)
Query: 131 SVISFNALLFACTRSRLYDKVPIL---------------FDEIPK--------------- 160
S++ FN LL A + + YD V L F+ +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 161 ----KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
K PD+++ G L+ C A+ L+++M G + V Y +++ L K
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKELIDEMRDAGLKPDT 272
+A + E+E+KG+ +V Y + ++ D R L+ +M + P+
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR---LLSDMIKKKITPNV 260
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
I+Y+ L+ + KN + EAK+++E + P+ T+ + + LC D+A ++F
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDL 320
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V + D + L+ G K K++++ + R + ++
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + + LL + D + L +ME G+ T+ V+NC A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMT 280
+M K G + D V I + G R + L+D+M + G KPD ++YN ++
Sbjct: 143 LGKMLKLGYEPD----RVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + +++A ++ +E G PN T+ + LC S + A ++ + + P
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK K+ EAK + ++ P+++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 8/274 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGT 128
L K +R SD E L+ K P LC LI Y + G + A++ FD + +
Sbjct: 379 LCKERRLSDAEELLNEMKER---GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++++N L+ R K L+D++ + + P+ ++Y +L+ SHC+ G D A
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR-EIFPNHVTYSILIDSHCEKGQVDNAF 494
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
L+EM NKG+ +TY +++ + GN + ++ +M V D+ YN I
Sbjct: 495 AFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGY 554
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G L+ M + ++PD ++YN +++ + + M EA VY+ + G P+
Sbjct: 555 VKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDR 614
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
T+ + I +GN K++++ E + PD
Sbjct: 615 YTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G DHA +M E G + + ++ R+ L + + DE+ +
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM-VAF 363
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y LL C A ELLNEM+ +GV T+TT+++ + GN E+A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + + + + D+ YN I GD + EL D+M + P+ ++Y+ L+
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS 483
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+ +D A + + G PN T+ + I C SGN K + + +PD
Sbjct: 484 HCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPD 543
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T L+ G VK+ K+ EA +++ ++ +
Sbjct: 544 LITYNTLIHGYVKEGKMHEAFNLLKIMENE 573
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +AG+ A+R D+M G V+++N LL + R L +E+ K+
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM-KER 398
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++ L+ +C G+ +KAL+ + + ++ + VTY T+++ + +QG+ +A
Sbjct: 399 GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKA 458
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
LW +M + + + Y++ I ++ G + +DEM + G+ P+ ++YN ++
Sbjct: 459 NELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKG 518
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC++ + + ++ + + P+ T+ T I+ G +A+ + K + PD
Sbjct: 519 YCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T +++ G ++EA V + + +
Sbjct: 579 AVTYNMIISGFSVHGNMQEADWVYKKMGAR 608
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
+ N ++ + ++ + +V + E+ K+ + PD +++ +++ + +G + A+ L++
Sbjct: 161 TLNIMVHSYCKTLQFGEVDTVISEMEKRC-VFPDVVTHNVMVDARFRAGDVEAAMALIDS 219
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGD 252
M +KG++ VTY +VL L + G ++A ++ M+ GV DV ++N+ I G+
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGE 279
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
E EMR + PD +S++ L+ + + MD A + + E G P+ +
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
I C +G +A +V E V +PD T L+ GL K++++ +A+ ++ +K++
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 372 FPPNV 376
PP++
Sbjct: 400 VPPDL 404
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 1/172 (0%)
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKE 258
EV T T +++ K E + + SEMEK+ V DV +NV + + GD E
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
LID M G+KP ++YN ++ +N D+A++V+ ++ G +P+ +F I C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+G ++A + +KE PD + L+ ++ ++ A +R +++
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A T+ +M + G V+++N+++ A +++ DK + + + K
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN- 260
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +L +C SG +A+ L +M + GVE VTY+ +++ L K G EA
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G+ ++ Y + T G E + L+D M G+ PD ++ L+
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K +D+A V+ + + G +PNA T+ I LC SG + A F++ + P
Sbjct: 380 AYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
L+ GL K + A+ +I
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELI 464
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 37/261 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI +Y + G D AM F +M + G + +++ A++ C R+ D +L+ E
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED--AMLYFEQMID 434
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP I Y L+ C ++A EL+ EM ++G+ + T+ + ++++ K+G E
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+E+L+ M VRI G+KP+ I+YN L+
Sbjct: 495 SEKLFELM-------------VRI---------------------GVKPNVITYNTLING 520
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC MDEA K+ G+ G PN T+ T I C + A +FKE PD
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++++GL + ++ AK
Sbjct: 581 IITYNIILQGLFQTRRTAAAK 601
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
P LC LI +AG D + + G I+F LL C R D + I
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVL 210
+ + + P+ SY +LLK CD S +ALELL+ M + G V+YTTV+
Sbjct: 145 VLRRMTE-LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKP 270
N +K+G++++A +TY EM D G+ P
Sbjct: 204 NGFFKEGDSDKA-----------------------YSTY-----------HEMLDRGILP 229
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++YN ++ CK + MD+A +V + +NG P+ T+ + ++ C SG +A
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
K+ PD T LL++ L K + EA+ + ++ K+
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 135/308 (43%), Gaps = 10/308 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L ++ E LI + + ++I S+ + G + + F+ M +G
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+VI++N L+ C ++ + + +L + L P+ ++Y L+ +C + A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMV--SVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L L EME+ GV +TY +L L++ A+ L+ + + G ++++ YN+ +
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL-- 623
Query: 248 TYGGDPERLK----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+G +L ++ + LK + ++N ++ K DEAK ++ NG
Sbjct: 624 -HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN T+R ++ G G ++ ++F D + +V L+++ +I A
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 742
Query: 364 VIRTIKKK 371
+ I +K
Sbjct: 743 YLSMIDEK 750
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 40/267 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y AG D AM+ M +G + ++++ L+ C SR+ D + +LF E+
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL-VLFKEMESS 575
Query: 162 YNLSPDKISYGLLLKSH-----------------------------------CDSGSSDK 186
+SPD I+Y ++L+ C + +D
Sbjct: 576 -GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL++ + +++ T+ +++ L K G +EA+ L+ G+ + Y +
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
N G G E L +L M D G D+ NF++ + + A ++E S
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKE 332
A+T +I L G G + + Y+ E
Sbjct: 755 EASTASLFIDLLSG-GKYQEYYRFLPE 780
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + G R + M G +V+S+N LL C R ++ ++ D I +
Sbjct: 16 LVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRG 75
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD ++Y LL +C +G +++ ELL E+ ++G+ + YT V+ L K E
Sbjct: 76 GRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGE 135
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L EM + G + +N I+ + E L+ M +G+K D ++YN LM
Sbjct: 136 ALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMD 195
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA+++ E ++ +GC+P+ + +++Y LC SG A++V ++ P
Sbjct: 196 GLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDP 255
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ T +++GL K KI A
Sbjct: 256 NVVTYNTILDGLCKSGKIDTA 276
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 13/258 (5%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
M D ++T M G V+++N L+ C RL + +L E K +PD ++
Sbjct: 170 MADSLLQT---MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL--ERMKASGCAPDVVA 224
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y + C SG A ++L +M + + VTY T+L+ L K G + A + +M
Sbjct: 225 YSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Query: 231 KK-GVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
G L+V Y+ + G + + +++ M AG +PD ++Y+ L+ CK +
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV-----HKIPDFN 343
+EA + + GC PNA T+ + ++ LC G +A ++ +E H P +
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVS 404
Query: 344 TVKLLVEGLVKKKKIKEA 361
T L+ GL K +I +A
Sbjct: 405 TYNALIGGLCKAGRIDDA 422
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 10/267 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ +AG A + ++M G V+++++ ++ C ++ + +L E +
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL--EQMRD 250
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ ++Y +L C SG D ALE++ +M + G + V Y+TV++ L K G +
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQ 310
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA + M + G DV Y+ + G E E + EM G KP+ ++Y L+
Sbjct: 311 EARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV 370
Query: 280 TCYCKNEMMDEAKKVYEGLEE-----NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
C + EA+++ E + + C P+ +T+ I LC +G D A K F+
Sbjct: 371 HGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEA 361
PD + +VEGL + + +A
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 9/223 (4%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P I++ L+ C + + A LL M GV+ VTY T+++ L K G +
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQ 204
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYN 276
EAE+L M+ G DV AY+ + YG G +++++MRD+ P+ ++YN
Sbjct: 205 EAEQLLERMKASGCAPDVVAYS---SFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYN 261
Query: 277 FLMTCYCKNEMMDEAKKVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
++ CK+ +D A ++ E + +GC N + T + LC G +A V +
Sbjct: 262 TILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMAR 321
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
PD T LV GL K KI+EA +R + + PN +
Sbjct: 322 AGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ +++ L+ G LL M +G++ V+Y +L L K EAE L
Sbjct: 8 PNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEEL 67
Query: 226 WSEMEKKG--VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+M +G D+ Y+ ++ G E +EL+ E+ GL+PD + Y +M
Sbjct: 68 VRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK+ + EA ++ E + GC P TF T I C N + A + + D
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T L++GL K +++EA+ ++ +K P+V+
Sbjct: 188 VTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 149/319 (46%), Gaps = 11/319 (3%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
+P S Y + V L KS + + ++++ K+ LI +AG D A
Sbjct: 51 APTPSMY--NFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+ D+M+ G +++++N L+ + + R + V ++ + +PD +Y ++
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVM-----QGMTTTPDTQTYNAII 163
Query: 176 KSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKG 233
C SG D+A L EM+ + G T TY+ ++N L K N +A+ L EM +K
Sbjct: 164 HGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKD 223
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
V A+N + D +R +EL+ M + G PD ++Y+ ++ C+ +D+
Sbjct: 224 CCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGF 283
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ E + GC P+ T+ + LC +G +A ++ K + P+ T L+ +GL
Sbjct: 284 ALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K K+ A ++ +I+ K
Sbjct: 344 CKIDKLDMANDLLTSIRDK 362
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 48/317 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISFNALLFACTRSRLYDKVPILFDEIP-- 159
L+R++ AG AM +M++ G + +N + A +S KVP + +
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKS---GKVPEAMEVVKNM 80
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K PD +++ L+ C +G D+A ++L+EME G VTY T++N L G +
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD-AGLKPDTISYNF 277
EA + M D YN I G+ +R ++EM+ AG PDT +Y+
Sbjct: 141 GEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 278 LM------------------------TC------------YCKNEMMDEAKKVYEGLEEN 301
L+ C YCK + +D A+++ + E+
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC+P+ T+ T I LC G+ DK + + ++ V PD T +LV GL K K+ EA
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317
Query: 362 -KGVIRTIKKKFPPNVL 377
+ V R ++ PN +
Sbjct: 318 CRLVKRMLEDGCTPNAV 334
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 2/214 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + ++G D A ++M + G +++ L+ +S K L E+ +
Sbjct: 162 IIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGR 221
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +++ L+ +C + D+A ELL+ M G VTY+T+++ L + G+ ++
Sbjct: 222 KDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDK 281
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L +M +G DV Y V +T G L+ M + G P+ ++Y+ +
Sbjct: 282 GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFD 341
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
CK + +D A + + + G + F T +
Sbjct: 342 GLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 37/301 (12%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L ++K+F +I L++ D LI SYG+A AM F+QM E G
Sbjct: 366 VGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGC 425
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
PD+++Y L+ H +G D A+
Sbjct: 426 ------------------------------------EPDRVTYCTLIDIHAKAGFLDIAM 449
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-N 247
++ M+ G+ T TY+ ++NCL K G+ A RL+ EM +G ++ +N+ I +
Sbjct: 450 DMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALH 509
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ E +L +M++AG +PD ++Y+ +M ++EA+ V+ ++ P+
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ + +GN DKA++ ++ + P+ T L+ ++ ++ EA ++++
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Query: 368 I 368
+
Sbjct: 630 M 630
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+LL+EM G + TVTY +++ + +EA ++++M++ G + D Y I +
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G + ++ M++AGL PDT +Y+ ++ C K + A +++ + GC+PN
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
TF I + N++ A K++++ PD T +++E L ++EA+GV
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 368 IKKK 371
+++K
Sbjct: 560 MQRK 563
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LID 261
TYTT++ L + E +L EM + G + YN R+ ++Y G LKE + +
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN-RLIHSY-GRANYLKEAMNVFN 418
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M++AG +PD ++Y L+ + K +D A +Y+ ++E G SP+ T+ I L +G
Sbjct: 419 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAW 380
+ A+++F E V P+ T +++ K + + A + R ++ F P+ + +
Sbjct: 479 HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKV-TY 537
Query: 381 KKVEEELG 388
V E LG
Sbjct: 538 SIVMEVLG 545
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 82/205 (40%), Gaps = 3/205 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A+D+Y + + SP + Y+ + + L K+ L
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYS--VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + +A ++ A++ + M G ++++ ++ ++ +F E+ +K
Sbjct: 504 IMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N PD+ YGLL+ +G+ DKA + M G+ T ++L+ + E
Sbjct: 564 -NWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSE 622
Query: 222 AERLWSEMEKKGVDLDVAAYNVRIT 246
A L M G+ + Y + ++
Sbjct: 623 AYNLLQSMLALGLHPSLQTYTLLLS 647
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 130/302 (43%), Gaps = 38/302 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI--- 158
+L ++ F HA + M E G +V S NA L + R R D + EI
Sbjct: 159 SLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRR 218
Query: 159 ----PKKYNL----------------------------SPDKISYGLLLKSHCDSGSSDK 186
P Y L SP+ +S+ L+ +C+ G
Sbjct: 219 SCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGL 278
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL++ + M GV+ VT+ T++N K+ EA R+++EM+ VD V YN +
Sbjct: 279 ALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNT-LL 337
Query: 247 NTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
N YG GD E + +EM GLK D ++YN L+ CK+ +A L++
Sbjct: 338 NGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLV 397
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PNA+TF I C N ++A+ +++ V P+ T ++L+ K + A V
Sbjct: 398 PNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQV 457
Query: 365 IR 366
+R
Sbjct: 458 LR 459
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+IR+Y G ++M ++G +V+SFN L+ L+ + + + +
Sbjct: 231 IIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFG-LALKVKSLMVEN 289
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +++ L+ C +A + NEM+ V+ + VTY T+LN + G++E
Sbjct: 290 GVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMG 349
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R++ EM + G+ D+ YN I G ++ + E+ L P+ +++ L+T
Sbjct: 350 VRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITG 409
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + A +Y + +GCSPN TF+ I C + +FD A +V ++ + PD
Sbjct: 410 QCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPD 469
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+T+ L +GL + K + A
Sbjct: 470 LSTMSELCDGLCRCGKNQLA 489
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 2/240 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G+F A++ M E G +V++FN L+ + R + +F+E+ K
Sbjct: 266 LISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEM-KVA 324
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ P ++Y LL + G S+ + + EM G++ +TY ++ L K G ++A
Sbjct: 325 NVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKA 384
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E++K+ + + + ++ IT + ER + M +G P+ ++ L++
Sbjct: 385 AGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISA 444
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CKNE D A +V + SP+ +T LC G A + E + +PD
Sbjct: 445 FCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPD 504
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 6/203 (2%)
Query: 154 LFDEIPKKYNL--SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
LFD + Y L S + + L K+ + A + M+ G T + L+
Sbjct: 138 LFDALLFSYRLCNSSSPLVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLS 197
Query: 212 CLYKQGNAEEAERLWSEMEKKG-VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGL 268
L + A+ A + E+ ++ V +V N+ I Y G+ ++ +++++M D GL
Sbjct: 198 SLLRLRRADIALAFYREIRRRSCVSPNVYTLNM-IIRAYCMLGEVQKGFDMLEKMMDMGL 256
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ +S+N L++ YC + A KV + ENG PN TF T I C +A +
Sbjct: 257 SPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANR 316
Query: 329 VFKESVMVHKIPDFNTVKLLVEG 351
VF E + + P T L+ G
Sbjct: 317 VFNEMKVANVDPSVVTYNTLLNG 339
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE---ENGCSPNATTFRTWIYHLCGS 320
R + + P+ + N ++ YC M+ E +K ++ LE + G SPN +F T I C
Sbjct: 217 RRSCVSPNVYTLNMIIRAYC---MLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNK 273
Query: 321 GNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
G F A KV +S+MV P+ T L+ G K++K+ EA V +K
Sbjct: 274 GLFGLALKV--KSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMK 322
>gi|226493605|ref|NP_001151863.1| rf1 protein [Zea mays]
gi|195650381|gb|ACG44658.1| rf1 protein [Zea mays]
Length = 467
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R+ +G HA FD+M G +V++F L+ A C +L D + + + ++
Sbjct: 162 LMRAAAASGSLGHARHLFDEMLRRGIAPTVVTFGTLVAALCAAGQLEDAFEVK-EVMVRQ 220
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-VEVTTVTYTTVLNCLYKQGNAE 220
Y++ P+ Y L+K C+ G D A+ L EM K + + + Y T++ L++ G
Sbjct: 221 YHVLPNVYVYTSLIKGLCEKGDVDAAMALKEEMAGKADLVLDSAVYATLVRALFQVGRKG 280
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNF 277
L EM+ GV D YN + + D + L ++D+M+ G K D +SYN
Sbjct: 281 AVVGLLEEMKGSGVVADTVVYNAMLAG-FCEDEKDLAAAFAVLDDMQKNGCKADAVSYNT 339
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK +A ++ E + GC P+ T+R +C + F +A +V E V
Sbjct: 340 LVAGLCKLGRWRDAHELVEDMPRQGCHPDVVTYRMLFDGMCAAKEFLEANQVLDEMVFKG 399
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P + + V+G+ K+ + + V+ + K
Sbjct: 400 FAPSNDGAQKFVQGIEKEGDVVLLESVLCRLAK 432
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 183/399 (45%), Gaps = 57/399 (14%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYA---QDLTVRRLAKSKRFSDIETLIE--S 87
+ LR E DP AL ++ + AS RY+ DL + RLA ++ F +E+++ +
Sbjct: 24 AALRREPDPAAALRLFLNPP---ASATPFRYSLRCYDLIISRLAAARLFPAMESVLSRLA 80
Query: 88 HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC--TRS 145
+ P+ +E LC ++ +YG+A + A R F G PR+ + NALL A R+
Sbjct: 81 SSSGPR-PREQLLCRVVSAYGRARLPAAARRAFAHPAFPG-PRTARALNALLHALLACRA 138
Query: 146 RLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
L D + + D PD +Y +L+++ SGS A L +EM +G+ T VT
Sbjct: 139 PLRDLLAVCRDA-----GTPPDACTYNILMRAAAASGSLGHARHLFDEMLRRGIAPTVVT 193
Query: 206 YTTVLNCLYKQGNAEEAERLWSEM---------------------EKKGVD--------- 235
+ T++ L G E+A + M EK VD
Sbjct: 194 FGTLVAALCAAGQLEDAFEVKEVMVRQYHVLPNVYVYTSLIKGLCEKGDVDAAMALKEEM 253
Query: 236 -------LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
LD A Y + + G + L++EM+ +G+ DT+ YN ++ +C++E
Sbjct: 254 AGKADLVLDSAVYATLVRALFQVGRKGAVVGLLEEMKGSGVVADTVVYNAMLAGFCEDEK 313
Query: 288 -MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+ A V + +++NGC +A ++ T + LC G + A+++ ++ PD T +
Sbjct: 314 DLAAAFAVLDDMQKNGCKADAVSYNTLVAGLCKLGRWRDAHELVEDMPRQGCHPDVVTYR 373
Query: 347 LLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKKVE 384
+L +G+ K+ EA V+ + K F P+ A K V+
Sbjct: 374 MLFDGMCAAKEFLEANQVLDEMVFKGFAPSNDGAQKFVQ 412
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 27/293 (9%)
Query: 98 PYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
P L N L+ +Y A + +A + F++M+ G P + +N + + C R L + P L
Sbjct: 341 PSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPN--PELL 398
Query: 156 DEIPKKY------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
D K Y + +KI+ + C G +KA +++ EM KG TYT V
Sbjct: 399 DLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKV 458
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
+ L + ++A L+ EM+K GV+ DV Y + I + G E+ + DEMR AG
Sbjct: 459 ITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGC 518
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ ++Y L+ Y K++ + +A ++ + + C PNA T+ I LC +G KA +
Sbjct: 519 SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578
Query: 329 VFKESVMVHK----------------IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
V+ + + P+ T LV GL K +K+ +A ++
Sbjct: 579 VYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLL 631
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 136/290 (46%), Gaps = 25/290 (8%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
QA D A F +M ++G V ++ L+ + ++ L ++ FDE+ + SP+
Sbjct: 464 QAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEM-RSAGCSPNV 522
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW-- 226
++Y LL ++ S +A ++ + M +TY+ +++ L K G ++A ++
Sbjct: 523 VTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAK 582
Query: 227 ---------SEMEKKGVDLDVAAYNVRITNTYGGDPERL---------KELIDEMRDAGL 268
S+ +G D D + NV TYG L +L+D M AG
Sbjct: 583 LIGTSDNIESDFYFEGKDTDTISPNVV---TYGALVNGLCKAQKVSDAHDLLDAMLAAGC 639
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+P+ I Y+ L+ +CK +D A++V+ + + G P+ T+ + I + G D A K
Sbjct: 640 EPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
V + + P+ T +V+GL K + ++A ++ ++KK PNV+
Sbjct: 700 VLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVV 749
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 158/394 (40%), Gaps = 59/394 (14%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KA I + + P +S Y + +T L ++KR L + K K+ P +
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITF--LCQAKRVDKAFLLFQEMK---KVGVNPDVY 488
Query: 102 N---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR------------ 146
LI S+ +AG+ + A FD+M G +V+++ ALL A +S+
Sbjct: 489 TYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548
Query: 147 ------------------------------LYDKVPILFDEIPKKY--------NLSPDK 168
+Y K+ D I + +SP+
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNV 608
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
++YG L+ C + A +LL+ M G E + Y +++ K G + A+ ++
Sbjct: 609 VTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLR 668
Query: 229 MEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M K G V Y I + G + +++ +M P+ ++Y ++ CK
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++A + +E+ GCSPN T+ I L +G D ++F + P++ T ++
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRI 788
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
L+ + +A ++ +K+ P L+ ++
Sbjct: 789 LINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYR 822
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 138/330 (41%), Gaps = 38/330 (11%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K+++ SD L+++ + L+ + + G D A F +M + G
Sbjct: 615 VNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGY 674
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
SV ++ +L+ + D + ++ K + +P+ ++Y ++ C +G ++KAL
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD-SCNPNVVTYTAMVDGLCKTGETEKAL 733
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
LL+ ME KG VTYT +++ L K G + L+ +M+ KG + Y + I +
Sbjct: 734 NLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHC 793
Query: 249 YGGD-----------------PERLK-----------------ELIDEMRDAGLKPDTIS 274
P+ L+ L++EM P
Sbjct: 794 CAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPV 853
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT---FRTWIYHLCGSGNFDKAYKVFK 331
Y L+ + K ++ A ++++ + E S N + + I LC S ++A ++
Sbjct: 854 YGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYS 913
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
E +PD + LV+GL+++ K EA
Sbjct: 914 EMRRRGIVPDLSAFVCLVKGLIERNKWNEA 943
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 19/279 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG--TPRSVI-SFNALLFACTRSRLYDKVPILFDEIP 159
L++ AG + A R +M G RS + SF L C R D + +L E
Sbjct: 210 LVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQAL--CKEGRWGDALDLLEREDF 267
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + ++ GL+ ++ ++A+ L+ M VTY T+L K+
Sbjct: 268 KLDTVLCTQMISGLM-----EASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQL 322
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNF 277
+R+ + M +G + + +N + +TY D +L + M G P + YN
Sbjct: 323 GWCKRIINMMMTEGCNPSPSLFN-SLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNI 381
Query: 278 LMTCYCKNE------MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+ C E ++D A+KVYE + C N + LCG G F+KA+++ K
Sbjct: 382 FIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVK 441
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
E + +PD +T ++ L + K++ +A + + +KK
Sbjct: 442 EMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK 480
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 95/248 (38%), Gaps = 46/248 (18%)
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+L++ C G +ALE L +++ G + VTY ++ L G E A R+ EM
Sbjct: 174 VLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSAS 233
Query: 233 GVDLD---VAAY-------------------------NVRITNTYGGDPE-----RLKEL 259
G +D V ++ V T G E
Sbjct: 234 GFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSF 293
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+ MR P+ ++Y L+T + K + + K++ + GC+P+ + F + ++ C
Sbjct: 294 LHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCN 353
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRA 379
+ ++ AYK+F P + + + + ++++ P +L
Sbjct: 354 AEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPN-------------PELLDL 400
Query: 380 WKKVEEEL 387
+KV EE+
Sbjct: 401 AEKVYEEM 408
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 111/274 (40%), Gaps = 11/274 (4%)
Query: 42 DKALDIYSSVSKHYASP-VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL 100
D A+ + S + K +P V + A + + ++++ ++ +L+E P +
Sbjct: 695 DLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYT-- 752
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI G+AG D + F QM G + +++ L+ C + L D +L DE+ +
Sbjct: 753 -ALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQ 811
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ K G S +L LL EME+ Y +++ K G E
Sbjct: 812 TH---WPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLE 868
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTISYN 276
A L EM + L++A+ ++ + E L EMR G+ PD ++
Sbjct: 869 TALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFV 928
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
L+ + +EA ++ G+ + G + F
Sbjct: 929 CLVKGLIERNKWNEALQLCYGICQEGVNWEGNKF 962
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 160/345 (46%), Gaps = 15/345 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---Y 99
KA+++ + K+ P Y + L K+ + +L E D ++ P +
Sbjct: 195 KAVEVLDEMPKYGCEP--DEYVFGCLLDALCKNGSVKEAASLFE----DMRVRFNPNLRH 248
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEI 158
+L+ + + G A Q+ E G ++ +N LL ++ ++ D +L +
Sbjct: 249 FTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEM- 307
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
KK N P+ S+ +L++S C + D+A+ + EM+ G E VTYTT+++ K GN
Sbjct: 308 -KKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGN 366
Query: 219 AEEAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++A + +M +KG D +Y + + + + E ELI+EMR G PD YN
Sbjct: 367 TDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNT 426
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM-- 335
++ CK + EA +++ ++ G +P T+ ++ G +A FKE V
Sbjct: 427 MIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERG 486
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAW 380
+ P + T+K L L++ +K++ AK + + K + AW
Sbjct: 487 LLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAW 531
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 138/328 (42%), Gaps = 35/328 (10%)
Query: 69 VRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ L K ++F + LIE K +P + L+R + M A+ D+M + G
Sbjct: 148 IKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYG 207
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN------------------------ 163
F LL A ++ + LF+++ ++N
Sbjct: 208 CEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKH 267
Query: 164 ---------LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
PD + Y LL + +G A +LL EM+ ++T ++
Sbjct: 268 VLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFC 327
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
K +EA R+++EM+ G + DV Y I+ G+ ++ E++D+M G P +
Sbjct: 328 KTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL 387
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
SY +M + K E ++E ++ E + + GC P+ + T I +C G+ +A +++ E
Sbjct: 388 SYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM 447
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P +T L+V G + + + EA
Sbjct: 448 QAGGLNPGLDTYILMVHGFLSQGCLVEA 475
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 18/277 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDE----LGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+I++ G+ F ++M + + TP I L+ R+ K + DE+
Sbjct: 147 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI---VLMRRFASVRMVKKAVEVLDEM 203
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
PK Y PD+ +G LL + C +GS +A L +M + +T++L ++G
Sbjct: 204 PK-YGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGK 261
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTI 273
EA+ + ++++ G + D+ YN N GG + K +L+ EM+ P+
Sbjct: 262 IMEAKHVLVQIKEAGFEPDIVVYN----NLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAA 317
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
S+ L+ +CK E MDEA +++ ++ +GC + T+ T I C GN DKAY++ +
Sbjct: 318 SFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDM 377
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ P + ++ KK++++E +I ++K
Sbjct: 378 IQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRK 414
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 27/355 (7%)
Query: 3 SLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
+LRH L G A + V ++ F+PD + +Y+++ YA R
Sbjct: 245 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG----FEPD--IVVYNNLLGGYAQAGKMR 298
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
A DL LA+ K+ + N T LI+S+ + D AMR F +
Sbjct: 299 DAFDL----LAEMKK-------VNCGPNAASFTI------LIQSFCKTEKMDEAMRIFTE 341
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G V+++ L+ + DK + D++ +K + P ++SY ++ +H
Sbjct: 342 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGH-DPSQLSYLCIMMAHEKKE 400
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
++ +EL+ EM G Y T++ + K G+ +EA RLW EM+ G++ + Y
Sbjct: 401 ELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYI 460
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGL--KPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ + G + EM + GL P + L + E ++ AK ++ +
Sbjct: 461 LMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMT 520
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
GC N + + WI+ L +G+ +A + + +P +T L+ GL K
Sbjct: 521 TKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKK 575
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 259 LIDEMRDAG---LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
LI+EMR L P+ + LM + M+ +A +V + + + GC P+ F +
Sbjct: 163 LIEEMRKENPYMLTPEV--FIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLD 220
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
LC +G+ +A +F E + V P+ L+ G ++ KI EAK V+ IK+ F P
Sbjct: 221 ALCKNGSVKEAASLF-EDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEP 279
Query: 375 NVL 377
+++
Sbjct: 280 DIV 282
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 9/323 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYL 100
D+A+D++ + P Y + ++ L S+R S+ L+ E + K Y
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYT--VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
LI S F+ A QM E G +VI++NAL+ C R + D V ++ E+
Sbjct: 363 V-LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV--ELM 419
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ LSP+ +Y L+K +C S + KA+ +LN+M + V VTY ++++ + GN
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFL 278
+ A RL S M +G+ D Y I + E +L D + G+ P+ + Y L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YCK +DEA + E + C PN+ TF I+ LC G +A + ++ V +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
P +T +L+ L+K A
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHA 621
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 37/312 (11%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y Q D A + F++M G R+ +++ L+ +R D+ LF ++ K
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM-KD 316
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P +Y +L+KS C S +AL L+ EME G++ TYT +++ L Q E+
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI---------------------------TNTYG---- 250
A L +M +KG+ +V YN I T TY
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436
Query: 251 ----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + ++++M + + PD ++YN L+ C++ D A ++ + + G P+
Sbjct: 437 GYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPD 496
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI- 365
T+ + I LC S ++A +F P+ L++G K K+ EA ++
Sbjct: 497 QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 366 RTIKKKFPPNVL 377
+ + K PN L
Sbjct: 557 KMLSKNCLPNSL 568
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 157/388 (40%), Gaps = 88/388 (22%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y DL R++ K +RF LI N L+ S + G+ D + + +
Sbjct: 161 YVLDLC-RKMNKDERFELKYKLIIGCYN-----------TLLNSLARFGLVDEMKQVYME 208
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M E ++ ++N ++ + ++ +I + L PD +Y L+ +C
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEA-GLDPDFFTYTSLIMGYCQRK 267
Query: 183 SSDKALELLNEMENKGV---EV--------------------------------TTVTYT 207
D A ++ NEM KG EV T TYT
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYT 327
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDA 266
++ L EA L EME+ G+ ++ Y V I + E+ +EL+ +M +
Sbjct: 328 VLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN-------------------- 306
GL P+ I+YN L+ YCK M+++A V E +E SPN
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM 447
Query: 307 --------------ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVE 350
T+ + I C SGNFD AY++ S+M + +PD T +++
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL--SLMNDRGLVPDQWTYTSMID 505
Query: 351 GLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
L K K+++EA + ++++K PNV+
Sbjct: 506 SLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 126/262 (48%), Gaps = 6/262 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++G FD A R M++ G ++ +++ + +S+ ++ LFD + +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P+ + Y L+ +C +G D+A +L +M +K ++T+ +++ L G +E
Sbjct: 527 -GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +M K G+ V+ + I GD + +M +G KPD +Y +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI--YHLCGSGNFDKAYKVFKESVMVHK 338
YC+ + +A+ + + ENG SP+ T+ + I Y G NF A+ V K
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF--AFDVLKRMRDTGC 703
Query: 339 IPDFNTVKLLVEGLVKKKKIKE 360
P +T L++ L++ K K+
Sbjct: 704 EPSQHTFLSLIKHLLEMKYGKQ 725
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 10/213 (4%)
Query: 173 LLLKSHCDS-GSSDKALELLNEMENK-----GVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
LL+ CDS G + L+L +M ++ Y T+LN L + G +E ++++
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 227 SEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
EM + V ++ YN ++ N Y G+ E + + ++ +AGL PD +Y L+ YC+
Sbjct: 207 MEMLEDKVCPNIYTYN-KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ +D A KV+ + GC N + I+ LC + D+A +F + P T
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
+L++ L ++ EA +++ +++ PN+
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 24/280 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G FDHA F QM GT ++ + C RL D ++ ++
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM--RE 665
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL----YKQG 217
+SPD +Y L+K + D G ++ A ++L M + G E + T+ +++ L Y +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 218 NAEEAE--------------RLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDE 262
E E L +M + V + +Y I R+ E + D
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 263 M-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
M R+ G+ P + +N L++C CK + +EA KV + + G P + + I L G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
++ VF+ + D K++++G V K+ + EA
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDG-VGKQGLVEA 884
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 105/233 (45%), Gaps = 21/233 (9%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL----------------FACTRS 145
+LI+ YG G + A +M + G S +F +L+ C S
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 146 RL--YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME-NKGVEVT 202
+ +D V L +++ + ++++P+ SY L+ C+ G+ A ++ + M+ N+G+ +
Sbjct: 737 NMMEFDTVVELLEKMVE-HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELID 261
+ + +L+C K EA ++ +M G + + V I Y G+ ER +
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ G D +++ ++ K +++ +++ +E+NGC ++ T+ I
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 149/319 (46%), Gaps = 11/319 (3%)
Query: 57 SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
+P S Y + V L KS + + ++++ K+ LI +AG D A
Sbjct: 51 APTPSMY--NFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+ D+M+ G +++++N L+ + + R + V ++ + +PD +Y ++
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVM-----QGMTTTPDTQTYNAII 163
Query: 176 KSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKG 233
C SG D+A L EM+ + G T TY+ ++N L K N +A+ L EM +K
Sbjct: 164 HGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKD 223
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
V A+N + D +R +EL+ M + G PD ++Y+ ++ C+ +D+
Sbjct: 224 CCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGF 283
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ E + GC P+ T+ + LC +G +A ++ K + P+ T L+ +GL
Sbjct: 284 ALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGL 343
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K K+ A ++ +I+ K
Sbjct: 344 CKIDKLDMANDLLTSIRDK 362
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 48/317 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISFNALLFACTRSRLYDKVPILFDEIP-- 159
L+R++ AG AM +M++ G + +N + A +S KVP + +
Sbjct: 24 LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKS---GKVPEAMEVVKNM 80
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K PD +++ L+ C +G D+A ++L+EME G VTY T++N L G +
Sbjct: 81 KDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRS 140
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD-AGLKPDTISYNF 277
EA + M D YN I G+ +R ++EM+ AG PDT +Y+
Sbjct: 141 GEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 278 LM------------------------TC------------YCKNEMMDEAKKVYEGLEEN 301
L+ C YCK + +D A+++ + E+
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GC+P+ T+ T I LC G+ DK + + ++ V PD T +LV GL K K+ EA
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317
Query: 362 -KGVIRTIKKKFPPNVL 377
+ V R ++ PN +
Sbjct: 318 CRLVKRMLEDGCTPNAV 334
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 2/214 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + ++G D A ++M + G +++ L+ +S K L E+ +
Sbjct: 162 IIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGR 221
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +++ L+ +C + D+A ELL+ M G VTY+T+++ L + G+ ++
Sbjct: 222 KDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDK 281
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L +M +G DV Y V +T G L+ M + G P+ ++Y+ +
Sbjct: 282 GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFD 341
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
CK + +D A + + + G + F +
Sbjct: 342 GLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A F +M + G P ++++N+++ A ++R DK ++ K
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y L+ + +G +A+ + EM + VT + ++ L K G +EA
Sbjct: 285 VL-PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 343
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ M KG + DV +YN+ + N Y G + +L D M G+ PD ++N L+
Sbjct: 344 RDVFDTMAMKGQNPDVFSYNIML-NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y M+D+A ++ + ++G P+ T+RT I LC G D A + F + + P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D L++G + +AK +I I
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEI 490
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ F Q+ G ++I N LL C R + + IL P+ PD SY +L
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPE-LGCVPDVFSYSIL 188
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LKS CD G S +A +LL M G + V Y TV++ +K+G
Sbjct: 189 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEG--------------- 233
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
D + +L EM G+ PD ++YN ++ CK MD+A+
Sbjct: 234 -------------------DVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 274
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ PN T+ IY +G + +A +VFKE +PD T+ +L+ L
Sbjct: 275 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 334
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K KIKEA+ V T+ K
Sbjct: 335 CKYGKIKEARDVFDTMAMK 353
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 149/363 (41%), Gaps = 5/363 (1%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
G+ + + ++ + E D +KA D++ + + P Y V L K++
Sbjct: 211 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNS--VVHALCKAR 268
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
E + N + NLI Y G + A+R F +M V++ +
Sbjct: 269 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 328
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ + + + +FD + K +PD SY ++L + G +L + M
Sbjct: 329 MLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPER 255
G+ T+ ++ G ++A +++EM GV DV Y I G +
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 447
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
E ++M D G+ PD +YN L+ +C + + +AK++ + NG + F + I
Sbjct: 448 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 507
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
+LC G A +F +V V PD +L++G K+++A V + P
Sbjct: 508 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 567
Query: 375 NVL 377
NV+
Sbjct: 568 NVV 570
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 143/331 (43%), Gaps = 4/331 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ ++ + +P +YA + ++ + LI N+ +
Sbjct: 446 DDAMEKFNQMIDQGVAP--DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + G A FD +G + ++ L+ +K +FD +
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ + Y L+ +C G D+ L L EM +G++ +T+ Y+ +++ L++ G
Sbjct: 564 -GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP 622
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ + EM + G+ +D+ YN+ + + + L E+R +K + I+ N ++
Sbjct: 623 AKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 682
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ ++EAK ++ + + P+ T+ I +L G ++A +F P
Sbjct: 683 GMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ + +V L+KK +I A + I ++
Sbjct: 743 NSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A+ F ++ + ++I+ N ++ ++R ++ LF I + L P ++Y
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS-RLVPSVVTYS 713
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+++ + G ++A ++ + M+N G E + V+ L K+ A S+++++
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773
Query: 233 GVDLD 237
L+
Sbjct: 774 NFSLE 778
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 2/233 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y G +A + F M + G +V S+N ++ +S+ D+ L E+ K
Sbjct: 261 LMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK- 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ P+ ++Y L+ C G AL+LL EM ++G VTYT++L+ L K N ++A
Sbjct: 320 NMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKA 379
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M+++G+ + Y I GG + ++L + G + + +YN +++
Sbjct: 380 TALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISG 439
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
CK M+DEA + +EENGC P+A TF I L DKA K+ E +
Sbjct: 440 LCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G A++ +++ T +V+ +N ++ + +L ++ L+ E+ +
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR- 179
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ I+Y L+ C +G +A LLNEM K + TYT +++ L K+G +EA
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEA 239
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L + M K+GV +V +YN + G+ + K++ M G+ P+ SYN ++
Sbjct: 240 KNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDR 299
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK++ +DEA + + PN T+ + I C G A + KE + D
Sbjct: 300 LCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPAD 359
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
T L++ L K + + +A + +K++ PN
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPN 394
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 124/248 (50%), Gaps = 3/248 (1%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++ FN ++ + + + Y LF ++ K + PD + +L+ C G + +L
Sbjct: 10 IMEFNKIVGSLVKMKHYPTAISLFKQMQVK-GIEPDLFTLNILINCFCHLGQMTFSFTVL 68
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
++ G + T+T T++ L +G +++ ++ +G +D +Y +
Sbjct: 69 GKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKI 128
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ +L+ + D +P+ + YN ++ CK+++++EA +Y ++ G PN T+
Sbjct: 129 GETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITY 188
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T IY C +G +A+ + E ++ + P+ T +L++ L K+ K+KEAK ++ + K
Sbjct: 189 STLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTK 248
Query: 371 K-FPPNVL 377
+ PNV+
Sbjct: 249 EGVKPNVV 256
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 6/204 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIES--HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
Y+ ++ + RL KSKR + L+ HKN + +LI + + G A+
Sbjct: 291 YSYNIMIDRLCKSKRVDEAMNLLREVLHKN--MVPNTVTYSSLIDGFCKLGRITSALDLL 348
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+M G P V+++ +LL A +++ DK LF ++ K+ + P+K +Y L+ C
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERGIQPNKYTYTALIDGLCK 407
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G A +L + KG + TY +++ L K+G +EA + S+ME+ G D
Sbjct: 408 GGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVT 467
Query: 241 YNVRITNTYGGDP-ERLKELIDEM 263
+ + I + + D ++ ++L+ EM
Sbjct: 468 FEIIIRSLFEKDQNDKAEKLLHEM 491
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 167/387 (43%), Gaps = 46/387 (11%)
Query: 29 SKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIETLIES 87
S +L+++ + L +S+++ A +S Y + + RL + ++ +++
Sbjct: 42 SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYR--VMIERLGRECEMDMVQYILQQ 99
Query: 88 HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
K D E +I Y + G + A++ F ++ E G +V +N LL A
Sbjct: 100 MKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ + L+ + KK L P+ +Y +LLK+ C + D A +L EM NKG VTYT
Sbjct: 160 FQMINPLYTNM-KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYT 218
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDA 266
T+++ L K G ++A L + V YN I G E +L+ EM D
Sbjct: 219 TMVSSLCKAGKIDDARELAGRFKPS-----VPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEA-----------------------------KKVYEG 297
G+ P+ +SY+ ++ C + ++ A K+YE
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 298 LE------ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
L+ ++GC PN + T I+ LC +G+ ++A +V + +P+ T +L++G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 352 LVKKKKIKEAKGVI-RTIKKKFPPNVL 377
K + A R I PNV+
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVV 420
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 10/338 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A ++ +S P + Y V L K+ + D L K P + P
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTT--MVSSLCKAGKIDDARELAGRFK--PSV---PVYN 248
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G + A++ +M + G +V+S++ ++ + S + LF ++ +
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ ++ L+K G +AL+L M G E V Y T+++ L G+ EE
Sbjct: 309 -GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +M++ G +V Y++ I GD E + M G +P+ ++Y ++
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN M D+A + E + GC+PN TF T+I LCG+G + A K+ + +P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+ T L++ L + K +EA G+ + I+ + PN++
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYD 149
DP + Y C +I S +G + A F QM G ++ +F L+ C R +LY+
Sbjct: 276 DPNVVS--YSC-IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE 332
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ + ++ + P+ ++Y L+ C +GS ++AL++ ++M+ G TY+ +
Sbjct: 333 ALDLW--KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
++ K G+ A W+ M G +V Y + ++ L+++M G
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+TI++N + C N ++ A K+ E ++ +GC PN TT+ + L +++A+
Sbjct: 451 TPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+F+E + P+ T ++ G + + EA
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 103/250 (41%), Gaps = 45/250 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + ++G A T+++M G +V+++ ++ ++ ++D+ L +++ +
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE- 448
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ I++ +K C +G + A++LL M+ G TY +L+ L++ EEA
Sbjct: 449 GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA 508
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN------------------TYGGDPE---------- 254
L+ E+E + + ++ YN + G P+
Sbjct: 509 FGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHA 568
Query: 255 -----------RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+L E + M++ PD I+Y L+ C ++EA + G
Sbjct: 569 YCKQGKVKIAAQLVERVSSMKE--WHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGI 626
Query: 304 SPNATTFRTW 313
PN F TW
Sbjct: 627 CPN---FATW 633
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDL-TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
A+ + + H P + Y + L + R+ K + + IE+ P +
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN---T 529
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + +AGM A++ F + GT I++N ++ A + L + +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
PD I+Y L+ C+ + ++A+ L++ N+G+ T+ ++ C +
Sbjct: 590 EWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 17/315 (5%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L R D L+ S K + E + +AG D A F+ + + G
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+I ++ L+ ++ +D+ + E+ K ++SPD Y +L++ ++G + A LL
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGK-SISPDITLYTILIRRFAEAGRTKDAFLLL 377
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
+EM++KG T Y T+L L+ GN + A+ L SEM + V LD +N+ I
Sbjct: 378 DEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKK 437
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP----- 305
G ++ ++ DEM + G P ++YN L+ + M++EA+ ++ +E G +P
Sbjct: 438 GLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM-GNNPSLFLR 496
Query: 306 ---------NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ + R + +C SG KAYK+ + + +PD T L+ GL K K
Sbjct: 497 LTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAK 556
Query: 357 KIKEAKGVIRTIKKK 371
+ A + + ++ K
Sbjct: 557 NLDGALRLFKELQLK 571
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 68/335 (20%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T +C L + G+ D AM+ FD+M E G +V+++NAL+ R+ + ++ +L
Sbjct: 426 THNIMICGLCKK----GLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARML 481
Query: 155 FDEI-----PKKY-------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
F ++ P + N D S L+ C SG KA +LL + GV
Sbjct: 482 FHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPD 541
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDE 262
VTY T++N L K N + A RL+ E++ KG+ D Y I + E ++ +
Sbjct: 542 VVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQ 601
Query: 263 --MRDAGLKPDTISYNFLMTCYCK------------------------NEMMDEAKKVYE 296
+R G P YN +M C+ +E++ A+K +E
Sbjct: 602 NILRSGGF-PSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFE 660
Query: 297 G------------LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+++ S N + W+ LC D A ++F H + +F
Sbjct: 661 DGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIF------HILEEFGI 714
Query: 345 V------KLLVEGLVKKKKIKEAKGVIR-TIKKKF 372
V LL+ L + + A ++ T+ K+F
Sbjct: 715 VVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRF 749
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 132/339 (38%), Gaps = 71/339 (20%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+ L Y+ + SP + Y + +RR A++ R D L++ K+ +
Sbjct: 336 DEGLSYYTEMLGKSISPDITLYT--ILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYN 393
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+++ G D A +M + + N ++ + L DK +FD
Sbjct: 394 TLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFD----- 448
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
EM G T +TY +++ LY+ G EE
Sbjct: 449 -------------------------------EMGEHGCHPTVMTYNALIDGLYRAGMLEE 477
Query: 222 AERLWSEMEKKG-----VDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
A L+ +ME + L + A VR D E L++L+D M
Sbjct: 478 ARMLFHKMEMGNNPSLFLRLTLGANQVR-------DTESLRKLVDGM------------- 517
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
C++ + +A K+ G+ E+G P+ T+ T I LC + N D A ++FKE +
Sbjct: 518 ------CQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLK 571
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FP 373
PD T L++GL + + +A + + I + FP
Sbjct: 572 GISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFP 610
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 133/332 (40%), Gaps = 39/332 (11%)
Query: 45 LDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLI 104
L +YS++ + SP+ Y++ ++V ++ + + L ++ + L+
Sbjct: 95 LFLYSAIKRRLRSPL--LYSRAVSVLLASEPDAVAMFDALADARAAGLPAPSAAFRA-LV 151
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
++ AG A+ F +M + + +NA+ + L++ + L
Sbjct: 152 LAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCL 211
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
P+ +Y +L+ C G + AL++ +EM +G+ YT +L+ L +G E+A R
Sbjct: 212 -PNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGR 270
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
L M++ G PD ++Y ++ CK
Sbjct: 271 LLCSMKENGC----------------------------------PPDEVTYTVFLSGLCK 296
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+DEA +E L++ G + + I L +G FD+ + E + PD
Sbjct: 297 AGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITL 356
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
+L+ + + K+A ++ +K K F P+
Sbjct: 357 YTILIRRFAEAGRTKDAFLLLDEMKDKGFVPD 388
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 121/306 (39%), Gaps = 22/306 (7%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHK--NDP------- 92
DKA+ ++ + +H P Y + + L ++ + L + N+P
Sbjct: 441 DKAMQVFDEMGEHGCHPTVMTY--NALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLT 498
Query: 93 ----KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
++ L L+ Q+G A + + E G V+++N L+ +++
Sbjct: 499 LGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNL 558
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D LF E+ K +SPD+I+YG L+ + + A L + G + Y T
Sbjct: 559 DGALRLFKELQLK-GISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNT 617
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDL---DVAAYNVRITNTYGGDPERLKELIDEMRD 265
++ L + +A LW + K +L D N R G E +KELI +
Sbjct: 618 MMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQV 677
Query: 266 AG-LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
G L P+ Y + C+ +D+A +++ LEE G I +LC N +
Sbjct: 678 YGSLNPN--PYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLN 735
Query: 325 KAYKVF 330
A +
Sbjct: 736 AAVDIM 741
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 160/345 (46%), Gaps = 15/345 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---Y 99
KA+++ + K+ P Y + L K+ + +L E D ++ P +
Sbjct: 218 KAVEVLDEMPKYGCEP--DEYVFGCLLDALCKNGSVKEAASLFE----DMRVRFNPNLRH 271
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEI 158
+L+ + + G A Q+ E G ++ +N LL ++ ++ D +L +
Sbjct: 272 FTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEM- 330
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
KK N P+ S+ +L++S C + D+A+ + EM+ G E VTYTT+++ K GN
Sbjct: 331 -KKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGN 389
Query: 219 AEEAERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++A + +M +KG D +Y + + + + E ELI+EMR G PD YN
Sbjct: 390 TDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNT 449
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM-- 335
++ CK + EA +++ ++ G +P T+ ++ G +A FKE V
Sbjct: 450 MIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERG 509
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAW 380
+ P + T+K L L++ +K++ AK + + K + AW
Sbjct: 510 LLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVSAW 554
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 138/328 (42%), Gaps = 35/328 (10%)
Query: 69 VRRLAKSKRFSDIETLIES-HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
++ L K ++F + LIE K +P + L+R + M A+ D+M + G
Sbjct: 171 IKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYG 230
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN------------------------ 163
F LL A ++ + LF+++ ++N
Sbjct: 231 CEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKH 290
Query: 164 ---------LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
PD + Y LL + +G A +LL EM+ ++T ++
Sbjct: 291 VLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFC 350
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
K +EA R+++EM+ G + DV Y I+ G+ ++ E++D+M G P +
Sbjct: 351 KTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL 410
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
SY +M + K E ++E ++ E + + GC P+ + T I +C G+ +A +++ E
Sbjct: 411 SYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM 470
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
P +T L+V G + + + EA
Sbjct: 471 QAGGLNPGLDTYILMVHGFLSQGCLVEA 498
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 132/277 (47%), Gaps = 18/277 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDE----LGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+I++ G+ F ++M + + TP I L+ R+ K + DE+
Sbjct: 170 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFI---VLMRRFASVRMVKKAVEVLDEM 226
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
PK Y PD+ +G LL + C +GS +A L +M + +T++L ++G
Sbjct: 227 PK-YGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGK 284
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTI 273
EA+ + ++++ G + D+ YN N GG + K +L+ EM+ P+
Sbjct: 285 IMEAKHVLVQIKEAGFEPDIVVYN----NLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAA 340
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
S+ L+ +CK E MDEA +++ ++ +GC + T+ T I C GN DKAY++ +
Sbjct: 341 SFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDM 400
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ P + ++ KK++++E +I ++K
Sbjct: 401 IQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRK 437
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 27/355 (7%)
Query: 3 SLRHIRRLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSR 62
+LRH L G A + V ++ F+PD + +Y+++ YA R
Sbjct: 268 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAG----FEPD--IVVYNNLLGGYAQAGKMR 321
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
A DL LA+ K+ + N T LI+S+ + D AMR F +
Sbjct: 322 DAFDL----LAEMKK-------VNCGPNAASFTI------LIQSFCKTEKMDEAMRIFTE 364
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G V+++ L+ + DK + D++ +K + P ++SY ++ +H
Sbjct: 365 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGH-DPSQLSYLCIMMAHEKKE 423
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
++ +EL+ EM G Y T++ + K G+ +EA RLW EM+ G++ + Y
Sbjct: 424 ELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYI 483
Query: 243 VRITNTYG-GDPERLKELIDEMRDAGL--KPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ + G + EM + GL P + L + E ++ AK ++ +
Sbjct: 484 LMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMT 543
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
GC N + + WI+ L +G+ +A + + +P +T L+ GL K
Sbjct: 544 TKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKK 598
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 259 LIDEMRDAG---LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
LI+EMR L P+ + LM + M+ +A +V + + + GC P+ F +
Sbjct: 186 LIEEMRKENPYMLTPEV--FIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLD 243
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
LC +G+ +A +F E + V P+ L+ G ++ KI EAK V+ IK+ F P
Sbjct: 244 ALCKNGSVKEAASLF-EDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEP 302
Query: 375 NVL 377
+++
Sbjct: 303 DIV 305
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 167/387 (43%), Gaps = 46/387 (11%)
Query: 29 SKAKSKLRSEFDPDKALDIYSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIETLIES 87
S +L+++ + L +S+++ A +S Y + + RL + ++ +++
Sbjct: 42 SDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYR--VMIERLGRECEMDMVQYILQQ 99
Query: 88 HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
K D E +I Y + G + A++ F ++ E G +V +N LL A
Sbjct: 100 MKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ + L+ + KK L P+ +Y +LLK+ C + D A +L EM NKG VTYT
Sbjct: 160 FQMINPLYTNM-KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYT 218
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDA 266
T+++ L K G ++A L + V YN I G E +L+ EM D
Sbjct: 219 TMVSSLCKAGKIDDARELAGRFKPS-----VPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEA-----------------------------KKVYEG 297
G+ P+ +SY+ ++ C + ++ A K+YE
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 298 LE------ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
L+ ++GC PN + T I+ LC +G+ ++A +V + +P+ T +L++G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 352 LVKKKKIKEAKGVI-RTIKKKFPPNVL 377
K + A R I PNV+
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVV 420
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 10/338 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A ++ +S P + Y V L K+ + D L K P + P
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTT--MVSSLCKAGKIDDARELAGRFK--PSV---PVYN 248
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G + A++ +M + G +V+S++ ++ + S + LF ++ +
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLR 308
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ ++ L+K G +AL+L M G E V Y T+++ L G+ EE
Sbjct: 309 -GCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +M++ G +V Y++ I GD E + M G +P+ ++Y ++
Sbjct: 368 ALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD 427
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN M D+A + E + GC+PN TF T+I LCG+G + A K+ + +P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+ T L++ L + K +EA G+ + I+ + PN++
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 148/348 (42%), Gaps = 53/348 (15%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYD 149
DP + Y C +I S +G + A F QM G ++ +F L+ C R +LY+
Sbjct: 276 DPNVVS--YSC-IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE 332
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ + ++ + P+ ++Y L+ C +GS ++AL++ ++M+ G TY+ +
Sbjct: 333 ALDLW--KLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSIL 390
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
++ K G+ A W+ M G +V Y + ++ L+++M G
Sbjct: 391 IDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGC 450
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF------------------ 310
P+T+++N + C N ++ A K+ E ++ +GC PN TT+
Sbjct: 451 TPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFG 510
Query: 311 -----------------RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
T +Y +G +A ++F ++++ PD T ++
Sbjct: 511 LFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYC 570
Query: 354 KKKKIKEAKGVIRTIK--KKFPPNVLR---------AWKKVEEELGLV 390
K+ K+K A ++ + K++ P+++ W +EE + +
Sbjct: 571 KQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFL 618
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 120/314 (38%), Gaps = 47/314 (14%)
Query: 3 SLRHIRRLCTATTAAG---SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV 59
SL ++C +G + TT S + AKS D A + ++ + H P
Sbjct: 364 SLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG-----DLVGASETWNRMISHGCRPN 418
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
Y V L K+ F +L+E + I+ G + AM+
Sbjct: 419 VVTYT--CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKL 476
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
++M G ++ ++N LL A R Y++ LF EI + NL P+ ++Y +L
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEAR-NLQPNLVTYNTVLYGFS 535
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
+G +AL+L + +G ++TY T+++ KQG + A +L
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL-------------- 581
Query: 240 AYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
E + M++ PD I+Y L+ C ++EA +
Sbjct: 582 -----------------VERVSSMKE--WHPDIITYTSLIWGACNWMNIEEAMAFLDKAI 622
Query: 300 ENGCSPNATTFRTW 313
G PN F TW
Sbjct: 623 NQGICPN---FATW 633
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/172 (19%), Positives = 73/172 (42%), Gaps = 4/172 (2%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDL-TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
A+ + + H P + Y + L + R+ K + + IE+ P +
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN---T 529
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + +AGM A++ F + GT I++N ++ A + L + +
Sbjct: 530 VLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK 589
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
PD I+Y L+ C+ + ++A+ L++ N+G+ T+ ++ C +
Sbjct: 590 EWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 136/281 (48%), Gaps = 8/281 (2%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---YLCNLIRSYGQAGM 112
+ P S + ++ + ++ + E + E N+ + + +P +I Y +AG
Sbjct: 206 SGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGD 265
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A + F QM E G P S ++FN+L+ T Y +V ++D++ ++ L PD +SY
Sbjct: 266 YAQARKLFAQMSERGIPLSTVTFNSLMSFETN---YKEVSSIYDQM-QRTALKPDVVSYS 321
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+K++ + ++AL + EM + GV T +Y +++ G EEA ++ M +
Sbjct: 322 LLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRH 381
Query: 233 GVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V+ D+ +Y + D + ++ +++ GLKP+ + Y LM Y K ++
Sbjct: 382 RVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERV 441
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+VYE + G PN T + T + + +F A FKE
Sbjct: 442 MRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKE 482
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG+ G F A R M++ G SVIS AL+ A R++ Y K +F + +
Sbjct: 148 LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRM-QTS 206
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGNA 219
P ++Y ++LKS + +A + ++ N+ + + ++ K G+
Sbjct: 207 GPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDY 266
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L+++M ++G+ L +N ++ + + + + + D+M+ LKPD +SY+ L+
Sbjct: 267 AQARKLFAQMSERGIPLSTVTFNSLMS--FETNYKEVSSIYDQMQRTALKPDVVSYSLLI 324
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K +EA V+E + + G P ++ I SG ++A+ VFK ++ H++
Sbjct: 325 KAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFK-AMRRHRV 383
Query: 340 -PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD + +V V + A+ R IK+ PNV+
Sbjct: 384 EPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVV 423
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ +G+ + A F M + S+ ++ A + D F I K+
Sbjct: 358 LIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRI-KED 416
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ + YG L+K + + ++ + + M +GVE YTT+++ + + A
Sbjct: 417 GLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNA 476
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGL----KPDTISYNF 277
+ EME +G D A N+ + + PE +E + + + KPD +Y
Sbjct: 477 VIWFKEMEARGYPADKKAKNILL--SLAKTPEEQEEANELTGNCAIQLEAKPDGTTYGL 533
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 6/263 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK-- 160
LI+ G A+ D+M E G V+++N+++ RS + D + K
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS---GDTSLALDLLRKME 220
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ N+ D +Y ++ S C G D A+ L EME KG++ + VTY +++ L K G
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ L +M + + +V +NV + G + EL EM G+ P+ I+YN LM
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC + EA + + + N CSP+ TF + I C D KVF+ +
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 340 PDFNTVKLLVEGLVKKKKIKEAK 362
+ T +LV+G + KIK A+
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAE 423
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 163/370 (44%), Gaps = 12/370 (3%)
Query: 10 LCTATTAAGSSTT-ASSISVSKA--KSKLRS---EFDPDKALDIYSSVSKHYASPVSSRY 63
LCT ++ S SSIS + +LRS + D A+ ++ + + P +
Sbjct: 32 LCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDF 91
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQ 122
++ + +A++K+F+ + + + + I Y N +I + + A +
Sbjct: 92 SRFFSA--IARTKQFNLVLDFCKQLELNG-IAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+ +LG +FN L+ + +L D + + PD ++Y ++ C SG
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYNSIVNGICRSG 207
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ AL+LL +ME + V+ TY+T+++ L + G + A L+ EME KG+ V YN
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 243 VRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G L+ +M + P+ I++N L+ + K + EA ++Y+ +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G SPN T+ T + C +A + V PD T L++G K++ +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 362 KGVIRTIKKK 371
V R I K+
Sbjct: 388 MKVFRNISKR 397
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 4/257 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Y A D M +++F +L+ C R+ D + + F I K+
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV-FRNISKR 397
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L + ++Y +L++ C SG A EL EM + GV +TY +L+ L G E+
Sbjct: 398 -GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +++K +DL + Y I GG E L + G+KP+ ++Y +++
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA + +EE+G +PN T+ T I G+ + K+ +E
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 341 DFNTVKLLVEGLVKKKK 357
D +++K++++ L+ K
Sbjct: 577 DASSIKMVIDMLLSAMK 593
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 123/266 (46%), Gaps = 4/266 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
VR L K+ +++D L++ + + L+ + + G A + +M G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++I++N L+ C ++RL + +L ++ + SPD +++ L+K +C D
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNML--DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+++ + +G+ VTY+ ++ + G + AE L+ EM GV DV Y + +
Sbjct: 388 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E+ E+ ++++ + + + Y ++ CK +++A ++ L G PN
Sbjct: 448 LCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKE 332
T+ I LC G+ +A + ++
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRK 533
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 129/286 (45%), Gaps = 4/286 (1%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
I Q+ Y C I + G+ G ++ A+R +M G + +++A++ AC + +
Sbjct: 31 IDQKSY-CMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVF 89
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
E+P K ++PD SYG + + G AL+LL EM + V + Y + +N
Sbjct: 90 FLMEMPTK-GIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSC 148
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDT 272
K G E A L EM G+ DV +Y+ I+ GG E EL ++MR +G+ PD
Sbjct: 149 AKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDV 208
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
I+Y + EA + + G +PN ++ + I G + A + +E
Sbjct: 209 ITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLRE 268
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+ P+ T ++ K + KEA ++R + PP+V+
Sbjct: 269 MKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVV 314
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 154/349 (44%), Gaps = 18/349 (5%)
Query: 26 ISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI 85
IS S A S ++AL+++ + +P Y + A R+ + +L+
Sbjct: 174 ISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGS--AIAACANGGRWKEAVSLL 231
Query: 86 ESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC 142
+ P + P + + +I + + G + A+ +M + ++I++NA + AC
Sbjct: 232 ---RKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDAC 288
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK-ALELLNEMENKGVEV 201
+ + + L E+P L PD +SY ++ + C G K A+++L EM G+
Sbjct: 289 AKGGRWKEAIDLLREMPT-VGLPPDVVSYSSVIDA-CSKGDRWKEAIDILREMPTVGLSP 346
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE--- 258
++Y + ++ K G +EA+ L EM GV V YN I G E+ KE
Sbjct: 347 NAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKG--EQWKEALA 404
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L+ EM GL SY+ + K + +AK++ + G +PN + + I C
Sbjct: 405 LLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAI-DAC 463
Query: 319 GSGN-FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
G G+ +++A + +E V PD + + K + KEA V++
Sbjct: 464 GRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLK 512
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 120/276 (43%), Gaps = 3/276 (1%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I + + G + A+ +M +G P V+S+++++ AC++ + + + E+P
Sbjct: 285 IDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPT-VG 343
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
LSP+ ISY + + G +A LL EM GV + Y + + K +EA
Sbjct: 344 LSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEAL 403
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-RLKELIDEMRDAGLKPDTISYNFLMTCY 282
L EM G+ V +Y+ I G+ + KEL+ EM GL P+ + YN +
Sbjct: 404 ALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDAC 463
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
+ + +EA + + G SP+ ++ + I + +A V KE PD
Sbjct: 464 GRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDL 523
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
++ K + K A ++ ++ PN++
Sbjct: 524 ICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNII 559
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 101/249 (40%), Gaps = 6/249 (2%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I + + G + A +M G + VI +N+ + AC + + + L E+P
Sbjct: 355 IDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPT-VG 413
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L SY + + KA ELL EM G+ V Y + ++ + EEA
Sbjct: 414 LHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAV 473
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMT 280
L EM G+ DV +Y+ I GD + KE ++ EM AGL PD I YN +
Sbjct: 474 DLLREMPTVGLSPDVFSYSSAIAACAKGD--QWKEALAVLKEMSAAGLAPDLICYNSAID 531
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
K A + + G +PN ++ + I G + + + +E +P
Sbjct: 532 ACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVP 591
Query: 341 DFNTVKLLV 349
D T L+
Sbjct: 592 DVITYHALM 600
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYN 163
I + G+ ++ A +M +G + + +N+ + AC R +++ L E+P
Sbjct: 425 IDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPT-VG 483
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
LSPD SY + + +AL +L EM G+ + Y + ++ K G + A
Sbjct: 484 LSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAV 543
Query: 224 RLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM-TC 281
L EM G+ ++ +Y+ I GG + L++EMR +G+ PD I+Y+ LM TC
Sbjct: 544 ALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALMVTC 603
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A F +M + G P ++++N+++ A ++R DK ++ K
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y L+ + +G +A+ + EM + VT + ++ L K G +EA
Sbjct: 298 VL-PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 356
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ M KG + DV +YN+ + N Y G + +L D M G+ PD ++N L+
Sbjct: 357 RDVFDTMAMKGQNPDVFSYNIML-NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y M+D+A ++ + ++G P+ T+RT I LC G D A + F + + P
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D L++G + +AK +I I
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEI 503
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ F Q+ G ++I N LL C R + + IL P+ PD SY +L
Sbjct: 143 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPE-LGCVPDVFSYSIL 201
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LKS CD G S +A +LL M G + V Y TV++ +K+G
Sbjct: 202 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEG--------------- 246
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
D + +L EM G+ PD ++YN ++ CK MD+A+
Sbjct: 247 -------------------DVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 287
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ PN T+ IY +G + +A +VFKE +PD T+ +L+ L
Sbjct: 288 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 347
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K KIKEA+ V T+ K
Sbjct: 348 CKYGKIKEARDVFDTMAMK 366
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 150/363 (41%), Gaps = 5/363 (1%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
G+ + + ++ + E D +KA D++ + + P Y + V L K++
Sbjct: 224 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY--NSVVHALCKAR 281
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
E + N + NLI Y G + A+R F +M V++ +
Sbjct: 282 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 341
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ + + + +FD + K +PD SY ++L + G +L + M
Sbjct: 342 MLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 400
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPER 255
G+ T+ ++ G ++A +++EM GV DV Y I G +
Sbjct: 401 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 460
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
E ++M D G+ PD +YN L+ +C + + +AK++ + NG + F + I
Sbjct: 461 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 520
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
+LC G A +F +V V PD +L++G K+++A V + P
Sbjct: 521 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 580
Query: 375 NVL 377
NV+
Sbjct: 581 NVV 583
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 143/331 (43%), Gaps = 4/331 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ ++ + +P +YA + ++ + LI N+ +
Sbjct: 459 DDAMEKFNQMIDQGVAP--DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 516
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + G A FD +G + ++ L+ +K +FD +
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ + Y L+ +C G D+ L L EM +G++ +T+ Y+ +++ L++ G
Sbjct: 577 -GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP 635
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ + EM + G+ +D+ YN+ + + + L E+R +K + I+ N ++
Sbjct: 636 AKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 695
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ ++EAK ++ + + PN T+ I +L G ++A +F P
Sbjct: 696 GMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 755
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ + +V L+KK +I A + I ++
Sbjct: 756 NSRLLNHVVRELLKKNEIVRAGAYLSKIDER 786
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A+ F ++ + ++I+ N ++ ++R ++ LF I + L P+ ++Y
Sbjct: 668 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS-RLVPNVVTYS 726
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+++ + G ++A ++ + M+N G E + V+ L K+ A S+++++
Sbjct: 727 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 786
Query: 233 GVDLD 237
L+
Sbjct: 787 NFSLE 791
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A F +M + G P ++++N+++ A ++R DK ++ K
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y L+ + +G +A+ + EM + VT + ++ L K G +EA
Sbjct: 288 VL-PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEA 346
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ M KG + DV +YN+ + N Y G + +L D M G+ PD ++N L+
Sbjct: 347 RDVFDTMAMKGQNPDVFSYNIML-NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 405
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y M+D+A ++ + ++G P+ T+RT I LC G D A + F + + P
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D L++G + +AK +I I
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEI 493
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 111/259 (42%), Gaps = 38/259 (14%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A+ F Q+ G ++I N LL C R + + IL P+ PD SY +L
Sbjct: 133 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPE-LGCVPDVFSYSIL 191
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LKS CD G S +A +LL M G + V Y TV++ +K+G
Sbjct: 192 LKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEG--------------- 236
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
D + +L EM G+ PD ++YN ++ CK MD+A+
Sbjct: 237 -------------------DVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 277
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ PN T+ IY +G + +A +VFKE +PD T+ +L+ L
Sbjct: 278 AFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSL 337
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K KIKEA+ V T+ K
Sbjct: 338 CKYGKIKEARDVFDTMAMK 356
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 150/363 (41%), Gaps = 5/363 (1%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
G+ + + ++ + E D +KA D++ + + P Y + V L K++
Sbjct: 214 GGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY--NSVVHALCKAR 271
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
E + N + NLI Y G + A+R F +M V++ +
Sbjct: 272 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLS 331
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ + + + +FD + K +PD SY ++L + G +L + M
Sbjct: 332 MLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 390
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPER 255
G+ T+ ++ G ++A +++EM GV DV Y I G +
Sbjct: 391 DGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDD 450
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
E ++M D G+ PD +YN L+ +C + + +AK++ + NG + F + I
Sbjct: 451 AMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIIN 510
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
+LC G A +F +V V PD +L++G K+++A V + P
Sbjct: 511 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 570
Query: 375 NVL 377
NV+
Sbjct: 571 NVV 573
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 144/331 (43%), Gaps = 4/331 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++ ++ + +P +YA + ++ + LI N+ +
Sbjct: 449 DDAMEKFNQMIDQGVAP--DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 506
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + G A FD +G + +N L+ +K +FD +
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ + YG L+ +C G D+ L L EM +G++ +T+ Y+ +++ L++ G
Sbjct: 567 -GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVP 625
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ + EM + G+ +D+ YN+ + + + L E+R +K + I+ N ++
Sbjct: 626 AKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 685
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ ++EAK ++ + + P+ T+ I +L G ++A +F P
Sbjct: 686 GMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 745
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ + +V L+KK +I A + I ++
Sbjct: 746 NSRLLNHVVRELLKKNEIVRAGAYLSKIDER 776
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A+ F ++ + ++I+ N ++ ++R ++ LF I + L P ++Y
Sbjct: 658 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS-RLVPSVVTYS 716
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+++ + G ++A ++ + M+N G E + V+ L K+ A S+++++
Sbjct: 717 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 776
Query: 233 GVDLD 237
L+
Sbjct: 777 NFSLE 781
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 158/342 (46%), Gaps = 23/342 (6%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYA----QDLT---VRRLAKSK--RFSDIETLI 85
++SE DP AL H VS+R A Q L +RRLA S + L+
Sbjct: 20 IKSERDPANAL-------SHLELLVSTRPAFPPPQPLIFHLLRRLATSSPSHLPRLLGLL 72
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTR 144
++ P+ ++ L ++ ++ +A M D A+ F D LG V S N LL A R
Sbjct: 73 PRMRHRPRFSESAALV-VLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVR 131
Query: 145 SRLYDKVPILFDEIPKKY---NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
+R Y F + ++P+ +Y ++L+S C G D+A+ L + + +GV
Sbjct: 132 ARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAP 191
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELI 260
VTY+T+++ L K + A L EM GV D YN ++ + G E+ ++
Sbjct: 192 DRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVW 251
Query: 261 DEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+++ RD G P+ +Y ++ CK EA +V+ + N + T+ I+ LC
Sbjct: 252 EQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCR 311
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
SG+ D A +V+ + V + D + L++G + + EA
Sbjct: 312 SGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 137/277 (49%), Gaps = 6/277 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + D+A+ D+M G + +NALL C R+ +++K +++++ +
Sbjct: 199 LMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDP 258
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ +Y ++L C G +A E+ + M + TVTY +++ L + G+ + A
Sbjct: 259 GASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSA 318
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
R++S+M K G+ LDV+ YN I G E K D +G++ T +YN +
Sbjct: 319 ARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK-FWDSTGFSGIRQIT-TYNIMTK 376
Query: 281 CYCKNEMMDEAKKVYEGLEENG-CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ M+ EA ++ + LE + CSP+ TF T I+ LC +G ++A+++ +++ +
Sbjct: 377 GLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEE 436
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
D + ++ K + +A V + +K PN
Sbjct: 437 LDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 29/291 (9%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI+ + + G A + +D G R + ++N + S + + L ++
Sbjct: 339 SLIKGFCEVGRTGEAWKFWDSTGFSGI-RQITTYNIMTKGLLDSGMVSEATELLKQLEND 397
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ SPDK+++G L+ C++G +++A E+L + N G E+ +Y++++N K G +
Sbjct: 398 ASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHD 457
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID------EMRDAGLKPDTISY 275
A ++ M K G + YN I R+ ++ D EM G P I+Y
Sbjct: 458 ANEVYKNMVKDGCKPNSHVYNALINGFC-----RVSKINDAIKIYIEMTSNGCCPTIITY 512
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE--- 332
N L+ CK E EA + + + E G P+ T+ + I LC D A +++ E
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572
Query: 333 -----SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
VMVH I L+ GL K+ EA + +K+K PN++
Sbjct: 573 AGLQVDVMVHNI--------LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLV 615
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 167/378 (44%), Gaps = 47/378 (12%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D+A+ ++SS+ + +P Y+ ++ LAK + + L++ N Q
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMS--GLAKHDQLDNALDLLDEMPNYG--VQADA 228
Query: 100 LC--NLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
+C L+ + GMF+ AM+ ++Q+ + G ++ ++ +L + + + ++
Sbjct: 229 VCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWS 288
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ N D ++YG+L+ C SG D A + ++M G+ + Y +++ +
Sbjct: 289 RMMAN-NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEV 347
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNV-------------------RITN---------T 248
G EA + W G+ + YN+ ++ N T
Sbjct: 348 GRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVT 406
Query: 249 YG---------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+G G R E++++ R++G + D SY+ ++ +CK+ +A +VY+ +
Sbjct: 407 FGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMV 466
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
++GC PN+ + I C + A K++ E P T L++GL K +K +
Sbjct: 467 KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQ 526
Query: 360 EAKGVIR-TIKKKFPPNV 376
EA + + +++ F P++
Sbjct: 527 EASSLTKEMLERGFKPDI 544
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 4/260 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
++I + + G A + M + G + +NAL+ C S++ D + I +
Sbjct: 444 SMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSN 503
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
P I+Y L+ C + +A L EM +G + TY +++ L + +
Sbjct: 504 --GCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A R+W E+ G+ +DV +N+ I G + + EM++ P+ ++YN LM
Sbjct: 562 VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + +D+A ++ + +NG P+ T+ T I LC + + E + +
Sbjct: 622 DGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIM 681
Query: 340 PDFNTVKLLVEGLVKKKKIK 359
P T +LV ++K I+
Sbjct: 682 PTVITWSILVRAVIKYGPIQ 701
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLCN 102
A ++Y ++ K P S Y + + + + +D I+ IE N T Y
Sbjct: 458 ANEVYKNMVKDGCKPNSHVY--NALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY-NT 514
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +A + A +M E G + ++ +L+ R + D ++DEI
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDA- 573
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D + + +L+ C +G D+A + EM+ K VTY T+++ Y+ G+ ++A
Sbjct: 574 GLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKA 633
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGD--PERLKELIDEMRDAGLKPDTISYNFLM 279
LW+ + G+ D+ YN RI + PE + L++E+ G+ P I+++ L+
Sbjct: 634 ASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVL-LLNEVLATGIMPTVITWSILV 691
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+++ F M E+G SV++FN+LL + LFDE+ Y ++PD ++ +L+
Sbjct: 255 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILI 314
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C + D+ EM + VTY T+++ L + G + A + M KK +
Sbjct: 315 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN 374
Query: 236 L--DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
L +V Y I D L+ EM GLKP+ I+YN L+ C+ + +D+ K
Sbjct: 375 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 434
Query: 293 KVYEGL-EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++ EG+ + G P+ T T I C G ++A+ VF++ + PD T +LV
Sbjct: 435 EILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRS 494
Query: 352 LVKKKKIKEAK 362
L ++ + A+
Sbjct: 495 LCQRGDFRRAE 505
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%), Gaps = 28/253 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR Y A+ +M G + I++N L+ ++ DK+ + + +
Sbjct: 385 LIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG 444
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD + L+K+HC G ++A + +M V+ + TY+ ++ L ++G+ A
Sbjct: 445 GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRA 504
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
E + E+ +K + L D G KP +YN +
Sbjct: 505 EEFFDELAEKEILL---------------------------HDVGCKPLVAAYNPMFEYL 537
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C N +A++V+ L + G + + +++T I C G + + + + +PD
Sbjct: 538 CSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDA 596
Query: 343 NTVKLLVEGLVKK 355
T L+++GL+KK
Sbjct: 597 ETYGLMIDGLLKK 609
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 22/196 (11%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
KAL +E KG +Y ++ L + N A +EKK
Sbjct: 203 KALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKS------------ 250
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-EGLEENGCS 304
G E +K + M++ G+ P +++N L++ K AK+++ E L+ G +
Sbjct: 251 -----GGAESIK-VFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVT 304
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ TF I C + D+ + FKE PD T LV+GL + K+K A V
Sbjct: 305 PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNV 364
Query: 365 IRTIKKKFP---PNVL 377
++ + KK P PNV+
Sbjct: 365 VKGMVKKSPNLSPNVV 380
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGVLIENFCKAGQYDQA 345
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D IPKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-IPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKY 285
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 49/256 (19%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ Y D A+R ++M G + I+++ LL C ++ + IL E+ K
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSIL-KEMMDK 284
Query: 162 YNLSPDKIS------------------------------------YGLLLKSHCDSGSSD 185
Y L+P S YG+L+++ C +G D
Sbjct: 285 Y-LAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYD 343
Query: 186 KALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 344 QAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-D 402
Query: 238 VAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
A N I ++ G P+ EL+ M + + +Y+ L+ Y K +AK +
Sbjct: 403 PTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALD 462
Query: 297 GLEENGCSPNATTFRT 312
+ EN P+++ FR+
Sbjct: 463 SMIENDHLPDSSLFRS 478
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
AM+ F++M G V+++N L+ + D+ ++P Y PD IS+ ++
Sbjct: 234 QAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS-YGCQPDVISHNMI 292
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L+S C G A++LL M KG + VT+ ++N L ++G +A + M K G
Sbjct: 293 LRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 352
Query: 235 DLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+ ++N I G +R E ++ M G PD ++YN L+T CK+ +D+A
Sbjct: 353 TPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 412
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ L GCSP+ ++ T I L G + A ++ +E PD T +V GL
Sbjct: 413 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLS 472
Query: 354 KKKKIKEAKGVIRTIKK 370
++ K++EA +K+
Sbjct: 473 REGKVREAMKFFHYLKR 489
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 143/303 (47%), Gaps = 10/303 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
++ ++K S I ++E +T L I Y ++G + A+R D+M G
Sbjct: 126 KIGRTKNASQIMGILEESGAVIDVTSYNVL---ISGYCKSGEIEEALRVLDRM---GVSP 179
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ +++A+L + C R +L + +L ++ K PD ++ +L+ + C +A++
Sbjct: 180 NAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK--CYPDVVTCTVLIDATCKESGVGQAMK 237
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
L NEM NKG + VTY ++ K G +EA R ++ G DV ++N+ + +
Sbjct: 238 LFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLC 297
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
GG +L+ M G P +++N L+ C+ ++ +A V E + ++G +PN+
Sbjct: 298 SGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSR 357
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+F I C D+A + + V PD T +L+ L K K+ +A ++ +
Sbjct: 358 SFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQL 417
Query: 369 KKK 371
K
Sbjct: 418 SSK 420
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 5/294 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+RRL ++ + +E N K LIR + + G +A + ++E G
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
V S+N L+ +S ++ + D + +SP+ +Y +L S CD G +A+
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLD----RMGVSPNAATYDAVLCSLCDRGKLKQAM 201
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
++L VT T +++ K+ +A +L++EM KG DV YNV I
Sbjct: 202 QVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGF 261
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
GG + + ++ G +PD IS+N ++ C +A K+ + GC P+
Sbjct: 262 CKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSV 321
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
TF I LC G KA V + P+ + L++G K I A
Sbjct: 322 VTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRA 375
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 4/252 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
++RS G + AM+ M G SV++FN L+ F C + L + +L E+ K
Sbjct: 292 ILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVL--EMMPK 349
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +P+ S+ L++ C+ D+A+E L M ++G VTY +L L K G ++
Sbjct: 350 HGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDD 409
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + S++ KG + +YN I G E EL++EM GLKPD I+ ++
Sbjct: 410 AVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVG 469
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + EA K + L+ PNA + + I LC S A + V P
Sbjct: 470 GLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKP 529
Query: 341 DFNTVKLLVEGL 352
T L++G+
Sbjct: 530 TEATYTTLIKGI 541
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 9/270 (3%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKY 162
+R + G + R + M G VI+ AL+ C R + I+ I ++
Sbjct: 86 LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIM--GILEES 143
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D SY +L+ +C SG ++AL +L+ M GV TY VL L +G ++A
Sbjct: 144 GAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQA 200
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ + DV V I T G + +K L +EMR+ G KPD ++YN L+
Sbjct: 201 MQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMK-LFNEMRNKGCKPDVVTYNVLIK 259
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK +DEA + + L GC P+ + + LC G + A K+ + +P
Sbjct: 260 GFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLP 319
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +L+ L +K + +A V+ + K
Sbjct: 320 SVVTFNILINFLCQKGLLGKALNVLEMMPK 349
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 10/274 (3%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM 123
+ ++ +R L R+ D L+ + + LI Q G+ A+ + M
Sbjct: 288 SHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMM 347
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+ G + SFN L+ + D+ I + EI PD ++Y +LL + C G
Sbjct: 348 PKHGHTPNSRSFNPLIQGFCNGKGIDRA-IEYLEIMVSRGCYPDIVTYNILLTALCKDGK 406
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
D A+ +L+++ +KG + ++Y TV++ L K G AE A L EM KG+ D+ +
Sbjct: 407 VDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL----I 462
Query: 244 RITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
T+ GG K + ++ ++P+ YN ++T CK++ A +
Sbjct: 463 TCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
GC P T+ T I + G + A K+ E
Sbjct: 523 VAKGCKPTEATYTTLIKGITYEGLAEDASKLSNE 556
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 2/201 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + D A+ + M G ++++N LL A + D ++ ++ K
Sbjct: 362 LIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSK- 420
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP ISY ++ G ++ A+ELL EM KG++ +T T+V+ L ++G EA
Sbjct: 421 GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREA 480
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTC 281
+ + +++ + + YN IT L + + +M G KP +Y L+
Sbjct: 481 MKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKG 540
Query: 282 YCKNEMMDEAKKVYEGLEENG 302
+ ++A K+ L G
Sbjct: 541 ITYEGLAEDASKLSNELYSRG 561
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F K++ + P+ Y ++ C S + A++ L +M KG + T TYTT++ +
Sbjct: 483 FFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGIT 542
Query: 215 KQGNAEEAERLWSEMEKKGV 234
+G AE+A +L +E+ +G+
Sbjct: 543 YEGLAEDASKLSNELYSRGL 562
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 152/323 (47%), Gaps = 38/323 (11%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ +Y GM A+ F+ + + G ++S+ +LL A RS +K +F+++ KK
Sbjct: 228 SLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKM-KK 286
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+K+SY L+ ++ +G +A+ LL+EME G++ V+ +T+L +
Sbjct: 287 NSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITR 346
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E + +G+DL+ AYN I + GD E+ EL MR++ +KPD ++YN L++
Sbjct: 347 IETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILIS 406
Query: 281 CYCK-----------NEMMD------------EAKKVYEGLEENGCSPNATTFRTWIYHL 317
K +M+D EA+ + ++++GC P+ T+ T I
Sbjct: 407 GSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAY 466
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP--- 374
G + +A+ +FKE + PD L+E K + + ++ +KKK P
Sbjct: 467 NAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQ 526
Query: 375 ----------NVLRAWKKVEEEL 387
++R WK E +
Sbjct: 527 KSYFEIIASCTMIRDWKTASEMI 549
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 129/276 (46%), Gaps = 10/276 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I + G AG + A+ +M E G +++ N +L A Y K I + EI K
Sbjct: 86 NVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKA-ISYFEIMKG 144
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV--TTVTYTTVLN--CLYKQG 217
N++ D + +++ G +A+EL N M + + VTYT++++ C+Y G
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIY--G 202
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISY 275
E + ++ M +GV ++ AYN + Y G + + ++ GL+PD +SY
Sbjct: 203 QVENCKAIFDLMVAEGVKPNIVAYN-SLLGAYASRGMHREALAIFNLIKKNGLRPDIVSY 261
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
L+ Y ++ ++A++V+ +++N C PN ++ I +G +A + E
Sbjct: 262 TSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEK 321
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD ++ L+ + ++I + ++ + +
Sbjct: 322 DGIQPDVVSISTLLAACGRCRQITRIETILEAARSR 357
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 132/281 (46%), Gaps = 7/281 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++ +AG + A+ + M P + ++N ++ AC + + K L ++ +
Sbjct: 51 SLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTEN 110
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +++ ++L + + KA+ M+ V T T +++CL K G E
Sbjct: 111 -GVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGE 169
Query: 222 AERLWSEMEKKGVDL--DVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
A L++ M ++ DV Y I ++Y G E K + D M G+KP+ ++YN
Sbjct: 170 AIELFNSMRERRTKCPPDVVTY-TSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNS 228
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ Y M EA ++ +++NG P+ ++ + + S +KA +VF +
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ + L++ +KEA G++ ++K P+V+
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV 329
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R D+ LF E+ +++ PD Y L+ +H +G A+ ++ +M + T
Sbjct: 23 RHNQVDQARGLFFEM-QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTR 81
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDE 262
TY V+N GN ++A L +M + GV D+ +N+ ++ G + +
Sbjct: 82 TTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEI 141
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE--NGCSPNATTFRTWIYHLCGS 320
M+ A + DT + N ++ C K EA +++ + E C P+ T+ + ++ C
Sbjct: 142 MKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIY 201
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
G + +F V P+ L+ + +EA + IKK
Sbjct: 202 GQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK 251
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 131/315 (41%), Gaps = 24/315 (7%)
Query: 5 RHIRRLCTATTAAGS-STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASP----- 58
R I R+ T AA S ++++ + S D +KAL++Y+S+ + P
Sbjct: 342 RQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 59 --------------VSSRYAQDLTVRRLAKSK--RFSDIETLIESHKNDPKITQEPYLCN 102
S R+ +D+ +++ +K + S+ E+ S K
Sbjct: 402 NILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTT 461
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI++Y G + A F +M+ G P I ++L+ A + ++V L E KK
Sbjct: 462 LIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLM-EFMKKK 520
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ ++ SY ++ S A E++ +++ ++ T VLN L K G E
Sbjct: 521 SIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENM 580
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L+ +M + ++ Y V + N G + E++ M D+G+ P + ++
Sbjct: 581 MKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMFQNVLPY 640
Query: 282 YCKNEMMDEAKKVYE 296
+ MD A + E
Sbjct: 641 IWRENGMDFAATMQE 655
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 107/267 (40%), Gaps = 29/267 (10%)
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
+ ++ + IET++E+ ++ + I+SY G ++ A+ + M E
Sbjct: 339 GRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDA 398
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIP----------------------KKYNLSPDKIS 170
+++N L+ ++ Y + F+++ KK PD ++
Sbjct: 399 VTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLT 458
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L++++ G +A +L EME G+ + ++++ K G E +L M+
Sbjct: 459 YTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMK 518
Query: 231 KKGVDLDVAAY-NVRITNTYGGDPERLKELIDEMRDAGLKPDTIS-----YNFLMTCYCK 284
KK + L+ +Y + + T D + E+I E D+ L ++ NFL C
Sbjct: 519 KKSIPLNQKSYFEIIASCTMIRDWKTASEMI-EYLDSSLSSISVGTLNHVLNFLGKCGKT 577
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFR 311
MM K+ G S A R
Sbjct: 578 ENMMKLFYKMVTSCSTVGLSTYAVVLR 604
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMR 264
Y ++ + ++A L+ EM++ D YN I ++ G ++++M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
A + P +YN ++ +A ++ + + ENG P+ T + L +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK---KFPPNVL 377
KA F+ + D T+ +++ LVK + EA + ++++ K PP+V+
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 3/278 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I G ++ A F++M + G +V++FN L+ A ++ ++ L + ++
Sbjct: 278 SIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR 337
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD +Y L+ C G D A +L ME+KG+E V+Y ++N K G E
Sbjct: 338 GE-SPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVE 396
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++L+ EM K + V YN +T + G L EM+ L P++ +YN L+
Sbjct: 397 AKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLD 456
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN + EA +++ LE + P+ F I LC + + A ++F P
Sbjct: 457 GLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEP 516
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ T +++ GL K +++ AK + +++K PN++
Sbjct: 517 NVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLV 554
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 120/248 (48%), Gaps = 3/248 (1%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+++ + ++ + + L DK LF E+ K +SPD ++Y ++ C +G + A L
Sbjct: 237 NLVCYCTIIDSLCKDGLIDKGKELFLEM-KGRGISPDVVAYSSIIHGMCHTGRWEGAKGL 295
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
NEM ++GV VT+ +++ L K G EEA L M ++G D YN I
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + ++L M G++ D +SYN L+ YCK+ M EAKK+Y + P T
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ T + L G A+ +F E + P+ T +L++GL K + EA + ++
Sbjct: 416 YNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLE 475
Query: 370 KK-FPPNV 376
F P++
Sbjct: 476 NHDFQPSI 483
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + +AG + A M + G ++N L+ C R+ D LF + K
Sbjct: 314 LIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRI-DDARDLFVSMESK 372
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D +SY +L+ +C SG +A +L EM K + T +TY T+L L+++G +
Sbjct: 373 -GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERL--------------------- 256
A L+ EM+ + + YN+ + N + + L
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLID 491
Query: 257 -----------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+EL + + GL+P+ I+Y ++ CK+ ++ AK ++ G+EE GC+P
Sbjct: 492 GLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAP 551
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
N TF T + C + K ++ +E PD +T+ ++V+ L K +K +E
Sbjct: 552 NLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYRE 606
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P+ + Y ++ S C G DK EL EM+ +G+ V Y+++++ + G E A+
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 224 RLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L++EM +GV +V +NV I G E L+ M G PDT +YN L+ +
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C +D+A+ ++ +E G +A ++ I C SG +A K+++E + +P
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T L+ GL ++ K+++A + +K
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMK 440
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 132/314 (42%), Gaps = 45/314 (14%)
Query: 102 NLIRSYGQAGMF--DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
N ++S ++G A F+ + ++ + SFN LL A + + Y V L+ +
Sbjct: 60 NFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRM- 118
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
L+PD I+ +L+ +C+ D L +L EM +G TVT+T+++ L
Sbjct: 119 SLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRI 178
Query: 220 EEAERLWSEMEKKGVDLDVAAYNV-------------------RITNTYGG-----DP-- 253
EA L +M + G +V Y + N GG P
Sbjct: 179 SEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNL 238
Query: 254 ----------------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
++ KEL EM+ G+ PD ++Y+ ++ C + AK ++
Sbjct: 239 VCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNE 298
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ + G PN TF I LC +G ++A + K + + PD T L++G + +
Sbjct: 299 MVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGR 358
Query: 358 IKEAKGVIRTIKKK 371
I +A+ + +++ K
Sbjct: 359 IDDARDLFVSMESK 372
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 137/281 (48%), Gaps = 11/281 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G +G D R F++M E G + + ++ + + LFDE+ +K
Sbjct: 7 LIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEK- 65
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L + +YG L+ C +G + A L+NEM+ +G++V + Y T+++ K+G +EA
Sbjct: 66 GLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEA 125
Query: 223 ERLWSEMEKKGVDLDVAAYN-----VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++ MEKKG + D+ N +R N PE K + M + G+ P+ +SY
Sbjct: 126 FKVQVIMEKKGFENDIYTLNTIADGLRKLN----QPEEAKRWLLTMIEKGVVPNVVSYTT 181
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ YCK EAKK+++ +++ G PNA T+ I G +AY++ E
Sbjct: 182 LIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKG 241
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD T L+ G K+ +A + +++K P NV+
Sbjct: 242 IFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVV 282
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+Y LL+ H SG D+ + EM KG++ YT V+N K GN + A L+ E+
Sbjct: 3 TYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDEL 62
Query: 230 EKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+KG+ +V Y I G+ E + L++EM+ GL + + YN L+ YCK ++
Sbjct: 63 TEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLI 122
Query: 289 DEAKKVY-----EGLE------------------------------ENGCSPNATTFRTW 313
DEA KV +G E E G PN ++ T
Sbjct: 123 DEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTL 182
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
I C GNF +A K+F+E P+ T +L++G KK ++KEA
Sbjct: 183 IDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEA 230
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 37/275 (13%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A FD++ E G +V ++ AL+ ++ + IL +E+ + L +++ Y L+
Sbjct: 55 AFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTR-GLDVNQLIYNTLI 113
Query: 176 KSHCDSGSSDKALELLNEMENKGVEV---------------------------------- 201
+C G D+A ++ ME KG E
Sbjct: 114 DGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVV 173
Query: 202 -TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKEL 259
V+YTT+++ K+GN EA++L+ EM+K G + + YNV I ++ G + EL
Sbjct: 174 PNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYEL 233
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
DEMR G+ PD +Y L+ C +D+A +++ + + G N T+ I L
Sbjct: 234 RDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSK 293
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
G ++A+K++ E PD LV L K
Sbjct: 294 EGRSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHK 328
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G F A + F +M + G + +++N L+ ++ + L DE+ K
Sbjct: 182 LIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK- 240
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y LL C G D A+EL NE+ KG+ + VTYT +++ L K+G +EEA
Sbjct: 241 GIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEA 300
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY 249
+L+ EM + G+ D Y +++ +
Sbjct: 301 FKLYDEMTEAGLTPDDRVYTSLVSSLH 327
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 70/325 (21%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
F A+ FDQM E+G VI+FN L+ C R+ + ++ + K L D ++Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK--GLHIDVVTY 264
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
G ++ C G + AL LL++ME ++ V Y+ +++ L K G+ +A+ L+SEM +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 232 KGVDLDVAAYNVRITN--TYG--GDPERL------------------------------- 256
KG+ +V YN I ++G D +RL
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 257 -KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-------------------- 295
++L DEM + PDT++YN ++ +CK+ D+AK ++
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 444
Query: 296 -----EGLE------ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
EG++ G N TT+ T I+ C N + A +F+E + PD T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIK 369
+L+ G + +K++EA + I+
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQ 529
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 12/333 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL++ S + + + P Y+ + RL K SD + L S + I +
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSA--IIDRLCKDGHHSDAQYLF-SEMLEKGIAPNVF 332
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N +I + G + A R M E V++FNAL+ A + + L DE+
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ + PD ++Y ++ C D A + + M + V VT+ T+++ +
Sbjct: 393 LHRC-IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV----VTFNTIIDVYCRAKR 447
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
+E +L E+ ++G+ + YN I D ++L EM G+ PDTI+ N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ +C+NE ++EA +++E ++ + + + I+ +C D+A+ +F S+ +H
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC-SLPIH 566
Query: 338 KI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ PD T +++ G K I +A + +K
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 24/277 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + ++ TF ++ +LG V++FN LL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE----------------- 189
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D+IS L L + +A+ L ++M G+ +T+ T++N L +G EA
Sbjct: 190 ----DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L ++M KG+ +DV Y + GD + L+ +M + +KPD + Y+ ++
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ +A+ ++ + E G +PN T+ I C G + A ++ ++ + PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
T L+ VK+ K+ EA+ + + + FP V
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 6/241 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
K RF D + + + + +T +I Y +A D M+ ++ G +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++N L+ + LF E+ + + PD I+ +LL C++ ++ALEL
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMIS-HGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
++ +++ TV Y +++ + K +EA L+ + GV+ DV YNV I+ G
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 252 DP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
L +M+D G +PD +YN L+ K +D++ ++ + NG S +A T
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Query: 311 R 311
+
Sbjct: 646 K 646
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
S+ +L+K CD +L ++ G + VT+ T+L+ L + EA L+ M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 230 EKKGVDLDVAAYN---------VRIT-NTY------GGDPERLKELIDEMRDAGLKPDTI 273
+ G VA ++ V IT NT G L+++M GL D +
Sbjct: 203 VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y ++ CK A + +EE P+ + I LC G+ A +F E
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ P+ T +++G + +A+ ++R I+++ P+VL
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 87/214 (40%), Gaps = 21/214 (9%)
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S D A++ + M T V V+ + + A L+ +ME + + L++ ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 243 VRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD---------- 289
+ I D +L ++ G +PD +++N L+ C + +
Sbjct: 146 ILIKCF--CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 290 -----EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
EA +++ + E G +P TF T I LC G +A + + V D T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+V G+ K K A ++ +++ P+V+
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVV 297
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 42/286 (14%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A FDQM + G V+++N+++ A +++R DK ++ + K + P++I++
Sbjct: 219 LDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAM-PNRITHN 277
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL +C SG + A+ + M GVE TY T++ L K G + EA +++ M K+
Sbjct: 278 SLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337
Query: 233 G-----------------------------------VDLDVAAYNVRI-TNTYGGDPERL 256
G + D +N+ I T T G +
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
L +MR GL PDT++Y +M C +D+A + L G +P+A FR I+
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPD---FNTV--KLLVEGLVKKKK 357
LC +DKA ++ E + P+ FNT+ L EG+V + K
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAK 503
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y G D M G FN L+ T+ D +LF ++ ++
Sbjct: 349 LLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKM-RRQ 407
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD ++YG+++ + C G D A+ + ++G+ V + +++ L + ++A
Sbjct: 408 GLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKA 467
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L EM +G+ + +N + + G R K + D M ++ D I+YN L+
Sbjct: 468 EELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDG 527
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC + +DEA K+ EG+ +G PN T+ T I C +G + A+ +F++ P
Sbjct: 528 YCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPG 587
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T +++GL + ++ AK
Sbjct: 588 IVTYSTILQGLFQARRTAAAK 608
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 41/274 (14%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPD 167
+ G D A ++ G I+F+ LL A C + R + + I +P +P+
Sbjct: 103 RVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPV-LGCTPN 161
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEM-----ENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SY +LLK CD S +AL LL+ M G V+Y TV+N L ++G
Sbjct: 162 VFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGR---- 217
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
LD A + L D+M D GL PD ++YN +++
Sbjct: 218 ------------QLDTAYH-----------------LFDQMLDQGLSPDVVTYNSIISAL 248
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
K MD+A V + +NG PN T + ++ C SG + A VFK PD
Sbjct: 249 SKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDV 308
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
T L+ L K + EA+ + + +K+ PN
Sbjct: 309 FTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPN 342
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 2/255 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI +D A +M G + I FN LL + + + +FD + +
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFD-LMVR 511
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ D I+Y L+ +C G D+A +LL M GV+ VTY T++N K G E+
Sbjct: 512 VDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIED 571
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ +M KGV+ + Y+ + + KEL M +G+K D +YN ++
Sbjct: 572 AFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILL 631
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+N D+A ++++ L TF I L G D+A +F + +P
Sbjct: 632 GLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
Query: 341 DFNTVKLLVEGLVKK 355
+ T L+++ L+++
Sbjct: 692 NVVTYWLMMKSLIEQ 706
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 110 AGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
G D AM F ++ G TP +V+ N + C R + +DK L E+ + + P+
Sbjct: 426 VGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDK-WDKAEELAVEMIGR-GICPNN 483
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
I + LL C G +A + + M V+ +TY T+++ G +EA +L
Sbjct: 484 IFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEG 543
Query: 229 MEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
M GV + YN I N Y G E L +M G+ P ++Y+ ++ +
Sbjct: 544 MVLDGVKPNEVTYNTMI-NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR 602
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
AK++Y + ++G + T+ + LC + D A ++F+ ++ + T
Sbjct: 603 RTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFN 662
Query: 347 LLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVLRAW 380
++++ L+K + EAK + + + + PNV+ W
Sbjct: 663 IMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 697
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 18/224 (8%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+ L+ + GM A FD M + R VI++N L+ C ++ + +L
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGM 544
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + P++++Y ++ +C +G + A L +M +KGV VTY+T+L L++
Sbjct: 545 VLD--GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR 602
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRI----TNTYGGDPERLKE---LIDEMRDAGLKP 270
A+ L+ M K G+ D+ YN+ + N D R+ + LID
Sbjct: 603 RTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLID------FHL 656
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ ++N ++ K DEAK ++ L G PN T+ W+
Sbjct: 657 ENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY--WL 698
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +AG A+ FD M G +V +FNAL+ R +K + DE+
Sbjct: 592 IIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALA- 650
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP++ +Y ++ + G + KA E ++ ++G+++ TY +L K G + A
Sbjct: 651 GVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA 710
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ EM + + + YN+ I GD +L+ +M+ G+KPD +Y +
Sbjct: 711 LAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINA 770
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M A K+ E +E +G PN T+ T I+ + +KA + F+E + PD
Sbjct: 771 CCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPD 830
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
L+ L+ + + EA
Sbjct: 831 KAVYHCLMTALLSRATVTEA 850
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 124/271 (45%), Gaps = 4/271 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +Y + A+ +M E G S+++++ ++ + D F E +
Sbjct: 346 SLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDR 405
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ + I YG ++ ++C + + D+A L+ EME +G++ Y T+++ GN E+
Sbjct: 406 HS-HMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEK 464
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
++ +++ G V +Y I N Y G + E+ M AG+K + +Y+ L+
Sbjct: 465 CLTVFERLKECGFAPSVVSYGCLI-NLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLI 523
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K + A ++E + ++G P+ + I CG G D+A + KE
Sbjct: 524 NGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHR 583
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P T ++ G + ++K A V +++
Sbjct: 584 PTSRTFMPIIHGFARAGEMKRALDVFDMMRR 614
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I +Y Q D A +M+ G + ++ ++ T +K +F+ + K+
Sbjct: 416 NMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERL-KE 474
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P +SYG L+ + G KALE+ ME+ G++ TY+ ++N K +
Sbjct: 475 CGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWAN 534
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ ++ K G+ DV YN I G G +R ++ EM+ +P + ++ ++
Sbjct: 535 AFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIH 594
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + M A V++ + +GC P TF I L +KA ++ E + P
Sbjct: 595 GFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSP 654
Query: 341 DFNTVKLLVEG 351
+ +T ++ G
Sbjct: 655 NEHTYTTIMHG 665
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G D A R F + + + + I + +++A ++ D+ L E+ +
Sbjct: 382 IVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEG 441
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P I Y ++ + G+ +K L + ++ G + V+Y ++N K G +A
Sbjct: 442 IDAPIDI-YHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKA 500
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ ME G+ ++ Y++ I D + +++ GLKPD + YN ++
Sbjct: 501 LEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRA 560
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C MD A + + +++ P + TF I+ +G +A VF IP
Sbjct: 561 FCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPT 620
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+T L+ GLV+K+++++A
Sbjct: 621 VHTFNALILGLVEKRQMEKA 640
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 8/221 (3%)
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
T+ + V F+ I K P + YGL++ + G +A + M +G+E T
Sbjct: 286 TQPENWQDVVSAFERIKK-----PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPT 340
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELI 260
+ YT++++ + EEA +M+++GV++ + Y++ I + G+ +
Sbjct: 341 SHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSI-IVGGFAKIGNADAADRWF 399
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
E +D + I Y ++ YC+ MD+A+ + +E G + T +
Sbjct: 400 KEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMV 459
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
GN +K VF+ P + L+ K KI +A
Sbjct: 460 GNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKA 500
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMTEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGVLIENFCKAGQYDQA 345
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKY 285
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 49/256 (19%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ Y D A+R ++M G + I+++ LL C ++ + IL E+ K
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSIL-KEMMDK 284
Query: 162 YNLSPDKIS------------------------------------YGLLLKSHCDSGSSD 185
Y L+P S YG+L+++ C +G D
Sbjct: 285 Y-LAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYD 343
Query: 186 KALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 344 QAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-D 402
Query: 238 VAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 403 PTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALD 462
Query: 297 GLEENGCSPNATTFRT 312
+ EN P+++ FR+
Sbjct: 463 SMIENDHLPDSSLFRS 478
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + ++ A + FD+M G ++FN+LL ++R +D+ + E+ ++
Sbjct: 249 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERV 307
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++Y L+ S+ G ++A+ L EME KG++ VTYTT+++ L + G + A
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 367
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ EM + G ++ YN +++ G PE + + DE R AG PD +++N L+
Sbjct: 368 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE-MMAVFDEFRSAGFVPDIVTWNTLLA 426
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +N + E V++ +++ G P T+ + I G FD A +++K + P
Sbjct: 427 VFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP 486
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D +T ++ L + + ++A+ + ++++
Sbjct: 487 DVSTYNAVLSALARGGRWEQAEKLFAEMEER 517
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K I + +LI SY + G+FD AM+ + +M E G V ++NA+
Sbjct: 435 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV 494
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R +++ LF E+ ++ + PD+ SY LL ++ ++ DK L +++ ++
Sbjct: 495 LSALARGGRWEQAEKLFAEMEER-DCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
+E T++ K N EAE+ + E+ +K LD+ N ++ YG
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVS-IYGKNRMVRKV 612
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
GD E+ + ++ E++ +G++PD SYN ++
Sbjct: 613 EKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYA 672
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + M EA +++ ++ +G P+ T+ ++ + F++A ++ + V P+
Sbjct: 673 YGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPN 732
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T +VEG + K+ +AK + + + P
Sbjct: 733 ERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHP 764
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 17/310 (5%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R +A++ R ++ L+++ P Y L+ ++ +AG F A+ F +M + G
Sbjct: 147 AIRVMARAGRLAEASALLDAA---PGPDAGAYTA-LVSAFSRAGRFRDAVAVFRRMVDSG 202
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIP------KKYNLSPDKISYGLLLKSHCDS 181
+++++N +L +Y K+ + + E+ K++ ++PD+ +Y L+
Sbjct: 203 VQPAIVTYNVVL------HVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRR 256
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+A ++ +EM+ G E VT+ ++L+ K +EA + EME+ G V Y
Sbjct: 257 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTY 316
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N I++ G E+ L EM G+KPD ++Y L++ + +D A Y+ +
Sbjct: 317 NSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 376
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NGC PN T+ I G F + VF E +PD T L+ + E
Sbjct: 377 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE 436
Query: 361 AKGVIRTIKK 370
GV + +KK
Sbjct: 437 VSGVFKEMKK 446
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 154/328 (46%), Gaps = 14/328 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTV---RRLAKSKRFSDIETLIESHKNDP-KITQEP 98
+ +++ +S+ +H +P RY + + RR A K + + +++ +P K+T
Sbjct: 226 EVVELVASMKEHGVAP--DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT--- 280
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+L+ YG+A D A+ +M+ +G P SV+++N+L+ + + L ++ L E+
Sbjct: 281 -FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 339
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + PD ++Y L+ +G D A+ +EM G + TY ++ +G
Sbjct: 340 EVK-GMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGK 398
Query: 219 AEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
E ++ E G D+ +N + + G D E + + EM+ AG P+ +Y
Sbjct: 399 FPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE-VSGVFKEMKKAGYIPERDTYV 457
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L++ Y + + D A ++Y+ + E G P+ +T+ + L G +++A K+F E
Sbjct: 458 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 517
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PD + L+ K++ + K +
Sbjct: 518 DCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+P LC LI+ +G G F M FD+ G ++++N LL ++ L +V
Sbjct: 380 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSG 439
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F E+ KK P++ +Y L+ S+ G D A+++ M G+ TY VL+ L
Sbjct: 440 VFKEM-KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 498
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKP- 270
+ G E+AE+L++EME++ D +Y+ + + Y +++K L D++ ++P
Sbjct: 499 ARGGRWEQAEKLFAEMEERDCKPDEYSYS-SLLHAYANAKRLDKMKALSDDIYSERIEPH 557
Query: 271 ----------------------------------DTISYNFLMTCYCKNEMMDEAKKVYE 296
D N +++ Y KN M+ + +K+
Sbjct: 558 NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS 617
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
++E+ + +A T+ + ++ G+ +K + E PD + ++ +K
Sbjct: 618 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 677
Query: 357 KIKEAKGVIRTIK 369
++KEA + +K
Sbjct: 678 QMKEASRLFSEMK 690
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV--RITNTYGGDPERLKELIDE 262
YT +++ + G +A ++ M GV + YNV + + + + EL+
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M++ G+ PD +YN L++C + + EA +V++ ++ +G P+ TF + + +
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
D+A +V +E V P T L+ VK +++A + + ++ K P+V+
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L L+ Y Q A M + G +V + N LL R+ K L E+
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM- 168
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ +L PD SY +++ C+ +KALEL NEM+ G + VT+ +++ K G
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA EM+ G++ D+ Y I G+ +R K L DE+ + G P I+YN L
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + EA +++E + E G PN T+ I LCG G +A ++ + +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
P+ T +++ L K + +A ++ +KK+ P N+
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 154/336 (45%), Gaps = 16/336 (4%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR---RLAKSKRFSDIETLIESHKNDPK 93
E D KAL + V + SP + Y + +R +L + K S+I + P
Sbjct: 261 GELDRGKAL--FDEVLERGDSPCAITY--NTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVP 152
+ LI G A++ + M E + +++N ++ C + D V
Sbjct: 317 VYTYT---GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM--ENKGVEVTTVTYTTVL 210
I+ E+ KK PD I+Y +LL C G D+A +LL M ++ + ++Y ++
Sbjct: 374 IV--ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLK 269
+ L K+ +A ++ + +K D N+ + +T GD + EL ++ D+ +
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
++ +Y ++ +CK M++ AK + + + P+ + + LC G+ D+A+++
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
F+E + PD + ++++G +K IK A+ ++
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 39/244 (15%)
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
T VIS+NAL+ C +RL+ + I +D + +K + D+++ +LL S +G +K
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDI-YDLLVEKLG-AGDRVTTNILLNSTLKAGDVNK 477
Query: 187 ALELLNEMENKGVEVTTVTYTTVL-------------------------------NCLY- 214
A+EL ++ + + + TYT ++ NCL
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 215 ---KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
K+G+ ++A RL+ EM++ DV ++N+ I + GD + + L+ M AGL P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D +Y+ L+ + K +DEA ++ + ++G P+A + + + G DK ++
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 331 KESV 334
K+ V
Sbjct: 658 KKLV 661
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + G+ A+ + M + T I++N LL C + L + +L+ +
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ISY L+ C +AL++ + + K VT +LN K G+ +
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A LW ++ + + Y I G K L+ +MR + L+P YN L++
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D+A +++E ++ + P+ +F I +G+ A + P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
D T L+ +K + EA + + F P+
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S + G D A R F++M V+SFN ++ ++ L + +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA- 593
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD +Y L+ G D+A+ ++M + G E +VL QG E
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG---ET 650
Query: 223 ERLWSEMEKKGVDLDVA 239
++L +E+ KK VD D+
Sbjct: 651 DKL-TELVKKLVDKDIV 666
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 10/275 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-------RLYDKVPILF 155
LI+ A F +M +LG + I++ L+ R+ +L+ + +L
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQE--MLN 229
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D N P ISY +++ + C D+A +L EM+ +G+ T ++YT++++
Sbjct: 230 DSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCC 289
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTIS 274
G EEA+RL++EM +GV +V +NV I G K+L++ M G+ P+ ++
Sbjct: 290 GGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 349
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
YN L+ +C ++ A++++ + GC P+ + I C + ++A K++ +
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
V K PD T L+ GL + K+ +AK + +K
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 444
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 153/361 (42%), Gaps = 44/361 (12%)
Query: 58 PVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAM 117
PV Y+ + + L K +R + L E K +LI + G ++ A
Sbjct: 240 PVVISYS--IIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAK 297
Query: 118 RTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
R F++M G +V++FN L+ C ++ + +L E+ + + P+ ++Y L++
Sbjct: 298 RLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL--EVMIQRGIVPNLLTYNSLIE 355
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
C G + A EL M +KG E + YT ++N K EEA +L++ M + G
Sbjct: 356 GFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415
Query: 237 DVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
DV Y +T + GG K+L M+ G+ D Y + CKN + EA +++
Sbjct: 416 DVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELF 475
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-------------SVMVHKI--- 339
L+ + F I LC +G + A+++F++ ++M+H+
Sbjct: 476 NKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRG 535
Query: 340 -------------------PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK---FPPNVL 377
PD T L+ G + KK+++ ++ + ++ N+L
Sbjct: 536 GQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 595
Query: 378 R 378
R
Sbjct: 596 R 596
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 140/302 (46%), Gaps = 21/302 (6%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
QA F H M + L SF LL + + Y +V L++++ + +SPD
Sbjct: 79 QAFQFFHLMMYSNPTPPLS------SFTHLLSGLAKIKHYSQVFYLYNQM-RLSGISPDC 131
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+ +LL C+ + L ++ + +G VTYTT++ L + +A L++
Sbjct: 132 CTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTR 191
Query: 229 MEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGL-----KPDTISYNFLMTC 281
M+K G + Y + G LK + + D+ L KP ISY+ ++
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK+ DEA+ ++E ++ G +P ++ + I+ C G +++A ++F E V P+
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVLRAWKKVEEELGLVPAPAVGDGQK 400
T +L++ L K+ K+ EAK ++ I++ PN+L + + E L VGD
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLL-TYNSLIEGFCL-----VGDLNS 365
Query: 401 AR 402
AR
Sbjct: 366 AR 367
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 141/333 (42%), Gaps = 21/333 (6%)
Query: 53 KHYASPVS-----SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+++ +P+S S + + + ++ F ++ S+ P + +L+
Sbjct: 51 QNFNTPISFQQQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSS----FTHLLSGL 106
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSP 166
+ + ++QM G + N LL C +R+ + + ++ + + Y P
Sbjct: 107 AKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGY--IP 164
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D ++Y L+K C KA L M+ G +TY T++ L + GN A +L
Sbjct: 165 DIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLH 224
Query: 227 SEMEKK----GVDLD--VAAYNVRITNTYGGD--PERLKELIDEMRDAGLKPDTISYNFL 278
EM G++ V +Y++ I + D + ++L +EM+ G+ P ISY L
Sbjct: 225 QEMLNDSSLYGINFKPVVISYSI-IIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +C +EAK+++ + G PN TF I LC G +A + + +
Sbjct: 284 IHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGI 343
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+P+ T L+EG + A+ + ++ K
Sbjct: 344 VPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 376
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 14/355 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ AL + + +P Y + ++ L K R D +L + D +
Sbjct: 282 EAALRLVEEMKGKGCAPTVFTYTE--LIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLIN 339
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI G+AG + A++ F +MD L +V+++N ++ A S+ L+ E K
Sbjct: 340 NLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKA 399
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++P +Y +L+ C + +KAL LL EM+ KG Y ++++ L + E
Sbjct: 400 NGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEA 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFL 278
A L+ E+++ Y V I + G+ RL + +D E G PD +YN L
Sbjct: 460 ANELFQELKENCGRSSARVYAVMI--KHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNAL 517
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M+ + M+DEA + + ENGC+P+ + + L +G +A ++F +
Sbjct: 518 MSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEI 577
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFP------PNVLRAWKKVEEE 386
+PD + ++ L + + A ++R +K K F ++L A KV+E+
Sbjct: 578 MPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDED 632
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 7/277 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ G+A M + A+ F Q+ + +N L+ ++K+ L++EI +
Sbjct: 165 ILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG 224
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N SPD I+Y L+ + D A L +EM+ G+ T YTT+L +K E A
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
RL EM+ KG V Y I G R+ + L M G KPD + N L+
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGL--GKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI 342
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ +++A K++ ++ C+PN T+ T I + S ++ E + + I
Sbjct: 343 NILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGI 402
Query: 340 -PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
P T +L++G K ++++A ++ + +K FPP
Sbjct: 403 APSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 135/267 (50%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ G+A F + +QM + G +V+++N L+ + R+ + +F+++ ++
Sbjct: 389 MVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQM-QEM 447
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD+++Y L+ H +G D A+ + M+ G+ T TY+ ++NCL K GN A
Sbjct: 448 GCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAA 507
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL+ EM +G ++ YN+ I + + EL +M++AG KPD ++Y+ +M
Sbjct: 508 HRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEV 567
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
++EA+ V+ + +N P+ + + +GN +KA++ + + +P+
Sbjct: 568 LGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPN 627
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T L+ ++ ++ +A +++ +
Sbjct: 628 VPTCNSLLSAFLRVHRLPDAYNLLQNM 654
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LID 261
TYTT++ L + +L +M K G +V YN R+ ++YG L+E + +
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYN-RLIHSYG-RANYLREALNVFN 442
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M++ G +PD ++Y L+ + K +D A +YE ++E G SP+ T+ I L SG
Sbjct: 443 QMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSG 502
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAW 380
N A+++F E V +P+ T +L+ K + + A + R ++ F P+ + +
Sbjct: 503 NLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKV-TY 561
Query: 381 KKVEEELG 388
V E LG
Sbjct: 562 SIVMEVLG 569
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 39/218 (17%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI + +AG D AM +++M E+G +++ ++ +S LF E+
Sbjct: 457 CTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVD 516
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ ++Y +L+ + + ALEL +M+N G + VTY+ V+ L G E
Sbjct: 517 Q-GCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLE 575
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKE-------------------- 258
EAE ++ EM + D Y + + + +G G+ E+ E
Sbjct: 576 EAEAVFFEMRQNHWVPDEPVYGL-LVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSL 634
Query: 259 ---------------LIDEMRDAGLKPDTISYNFLMTC 281
L+ M GL P +Y L++C
Sbjct: 635 LSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSC 672
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 134/263 (50%), Gaps = 16/263 (6%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
M D A+ FD+M + G +V+++ AL+ A C R+ D + K+N +++
Sbjct: 444 AMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAI--------LKFNQMINEV 495
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
YGL C +KA EL+ EM ++G+ + V + T++ L ++G EA+RL M
Sbjct: 496 -YGL-----CTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549
Query: 230 EKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ GV DV +YN + + G + +L+D M GLKP+ +YN L+ YCK +
Sbjct: 550 LRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRI 609
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
D+A + + NG +P+ T+ T ++ L +G F +A +++ + D T ++
Sbjct: 610 DDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNII 669
Query: 349 VEGLVKKKKIKEAKGVIRTIKKK 371
+ GL K + EA + +++ K
Sbjct: 670 LNGLCKNNCVDEAFKMFQSLCSK 692
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 18/345 (5%)
Query: 18 GSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
G T A +I S + ++ + D+A+ I+ + + SP Y
Sbjct: 423 GRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYG------------- 469
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+ I+ L + + D I + + N + ++ A +M + G V+ FN
Sbjct: 470 -ALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNT 528
Query: 138 LLF-ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ C R+ + ++ E+ + + PD ISY L+ HC +G +D+A +LL+ M +
Sbjct: 529 LMCDLCREGRVMEAQRLI--ELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPER 255
G++ TY T+L+ K ++A L EM G DV YN + + G
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
KEL M ++ + D +YN ++ CKN +DEA K+++ L G + TF I
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIG 706
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
L G + A +F +PD T L+ E L+K+ ++E
Sbjct: 707 ALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + G +H F + + G + I FN LL C RL + IL +P+
Sbjct: 201 LIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPE- 259
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVT--TVTYTTVLNCLYKQGN 218
+ +P+ +SY L+K C+ +++ALELL+ M +++G+ V+Y TV+N +++G
Sbjct: 260 FGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQ 319
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNF 277
++A L+ +M +G+ DV YN I +R K + +M D G+KP +YN
Sbjct: 320 VDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNC 379
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ Y E ++ E + + P+ + + +LC +G +A +F +
Sbjct: 380 LIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKG 439
Query: 338 KIPD 341
PD
Sbjct: 440 IKPD 443
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 136/304 (44%), Gaps = 48/304 (15%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTR-----SRLYDKVPI-LFDEIPKKYN--LSPD 167
A++ FD + P SV +FN LL A +R S L ++ I LFD + ++ + ++PD
Sbjct: 135 ALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPD 194
Query: 168 KISYGL-----------------------------------LLKSHCDSGSSDKALE-LL 191
+ +Y + LLK CD+ D+A LL
Sbjct: 195 RCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILL 254
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDL--DVAAYNVRITNT 248
M G V+Y T++ + AEEA L M + +G+ DV +YN I
Sbjct: 255 WRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGF 314
Query: 249 Y-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ G ++ L +M D G+ PD ++YN ++ CK +++D AK V++ + + G P+
Sbjct: 315 FREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSN 374
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I+ +G + + ++ +E PD LL++ L K + EA+ + +
Sbjct: 375 GTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDS 434
Query: 368 IKKK 371
+ +K
Sbjct: 435 VIRK 438
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 2/225 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G D A + D M +G + ++N LL ++R D L E+
Sbjct: 564 LVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMN- 622
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ++Y +L +G +A EL M N + TY +LN L K +EA
Sbjct: 623 GPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEA 682
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ + KG+ L + +N+ I GG E +L + GL PD +Y +
Sbjct: 683 FKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAEN 742
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
K ++E ++ +EENG +PN+ + G+ +A
Sbjct: 743 LIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRA 787
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 3/192 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPR 130
L ++ RFS+ + L + N + + Y N+I + D A + F + G
Sbjct: 638 LFQTGRFSEAKELYLNMINS-RTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQL 696
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+I+FN ++ A + + LF I Y L PD +Y L+ ++ GS ++ L
Sbjct: 697 HIITFNIMIGALLKGGKKEDAMDLFATI-SAYGLVPDVETYCLIAENLIKEGSLEELGVL 755
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
+ ME G + ++ +G+ A S++++K L+ + ++ I+
Sbjct: 756 FSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSR 815
Query: 251 GDPERLKELIDE 262
G+ ++L + + E
Sbjct: 816 GEYQQLAKSLPE 827
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 124/257 (48%), Gaps = 2/257 (0%)
Query: 110 AGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI 169
AG D AM M E G S+I+FN+++ A +++ L DK + ++ + L+P
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAY-KLMVHFGLTPSPS 302
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+ LL +G +A EL+ +M KG+ V + +T +L+ +K+G+ A+ LW EM
Sbjct: 303 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 362
Query: 230 EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
E++G+ DV A++ I + G E + EM GL P+ +YN L+ +CK +
Sbjct: 363 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 422
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+EA K+ + + G P+ T I LC G A VF + PD T L
Sbjct: 423 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482
Query: 349 VEGLVKKKKIKEAKGVI 365
+ G K + A ++
Sbjct: 483 INGYCKAFDMVNADNLV 499
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 161/393 (40%), Gaps = 85/393 (21%)
Query: 63 YAQDLTVRRLAKSKRFSD----IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
+A ++ + R SD +IE N +T +I ++ + G A +
Sbjct: 92 FAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFN----TVINAFCKEGNVVEARK 147
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD + E+G + I +N L+ + R D+ +L++E+ KK ++PD I++ +L+ H
Sbjct: 148 LFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKK-GIAPDGITFNILVSGH 206
Query: 179 -----------------------------------CDSGSSDKALELLNEMENKGVEVTT 203
C +G D+A+E L +M KG+ +
Sbjct: 207 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 266
Query: 204 VTYTTVL-----------------------------NC------LYKQGNAEEAERLWSE 228
+ + +V+ C L G +EA L +
Sbjct: 267 IAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQ 326
Query: 229 MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M +KG+ ++ A+ V + + GD + L EM G+ PD ++++ + K +
Sbjct: 327 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 386
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTV 345
++EA V+ + G PN + + I C G ++A K+ E VM H+ +PD T
Sbjct: 387 VEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKL--EKVMRHRGLLPDIFTT 444
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+++ GL K+ +++ A V + + P+++
Sbjct: 445 NMIIGGLCKQGRMRSAINVFMDMHQTGLSPDII 477
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 126/300 (42%), Gaps = 39/300 (13%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+ G + + + F + G +F+ ++ R L +PK ++ P+
Sbjct: 33 RVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPK-FHCEPNA 91
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y +++ + C G + AL N M +G T VT+ TV+N K+GN EA +L+
Sbjct: 92 FAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDG 151
Query: 229 MEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCY---- 282
+++ G + YN + N Y + ++ L +EMR G+ PD I++N L++ +
Sbjct: 152 LKEMGFSPNAIMYNT-LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYG 210
Query: 283 -------------------------------CKNEMMDEAKKVYEGLEENGCSPNATTFR 311
C +DEA + + E G SP+ F
Sbjct: 211 REEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFN 270
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ I +G DKA++ +K V P +T L+ GL +++EA +I + +K
Sbjct: 271 SVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEK 330
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 114/270 (42%), Gaps = 39/270 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
++I +Y QAG+ D A + M G TP + L+ RL + ++ I K
Sbjct: 271 SVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEK 330
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
LS + +++ +LL G A L EME +G+ V ++ ++ L KQG E
Sbjct: 331 --GLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 388
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI------------------------------TNTYG 250
EA ++ EM +KG+ + AYN I TN
Sbjct: 389 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 448
Query: 251 GD---PERLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
G R++ I+ +M GL PD I+YN L+ YCK M A + + +G +
Sbjct: 449 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 508
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
P+ TT+ I+ C S ++A + E V
Sbjct: 509 PDLTTYNIRIHGFCSSRRMNRAVLMLDELV 538
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 17/289 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + Y + +P S + L L+ + R + LI
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLM--GLSINGRLQEATELIGQMIEKGLSVNNMAFT 340
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ + + G A + +M+ G V++F+A + ++ L ++ +F E+ +K
Sbjct: 341 VLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK 400
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ +Y L+ C G ++AL+L M ++G+ T ++ L KQG
Sbjct: 401 -GLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRS 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A ++ +M + G+ D+ YN I N Y D L++ M +G PD +YN +
Sbjct: 460 AINVFMDMHQTGLSPDIITYNTLI-NGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRI 518
Query: 280 TCYCKNEMMDEAKKVYEGLEENG-------CSP--NATT--FRTWIYHL 317
+C + M+ A + + L G C P NA T F W L
Sbjct: 519 HGFCSSRRMNRAVLMLDELVSAGILSFSFACPPTLNAHTKHFYQWALKL 567
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
Query: 96 QEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF 155
+PY +I + G + A+ +M+E V+ +NA++ + + LF
Sbjct: 41 HQPY-GTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLF 99
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
E+ K + PD I+Y ++ S C SG A +LL +M + + VT++ ++N L K
Sbjct: 100 TEMHDK-GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDT 272
+G EAE ++ +M ++G+ YN I D RL K ++D M PD
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQD--RLNDAKRMLDSMASKSCSPDV 216
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++++ L+ YCK + +D +++ + G N T+ T I+ C G+ D A +
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ P++ T + ++ L KK++++A ++ ++K
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +++ L+ C G +AL L++ M +G + Y T++N L K G+ E A L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGDTESALNL 63
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
S+ME+ + V YN I G + L EM D G+ PD I+Y+ ++ +C+
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ +A+++ + E +P+ TF I L G +A +++ + + P T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
+++G K+ ++ +AK ++ ++ K P+V+
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GD 252
M G VT+TT++N L +G +A L M ++G Y I GD
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
E L+ +M + +K + YN ++ CK+ A+ ++ + + G P+ T+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK- 371
I C SG + A ++ ++ + PD T L+ LVK+ K+ EA+ + + ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 372 -FPPNV 376
FP +
Sbjct: 177 IFPTTI 182
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 41/325 (12%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y A+ DQM E+G I+F L+
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + ++ P+ ++YG+++ C G D A LLN+ME +E V Y+TV
Sbjct: 208 EAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERL--------- 256
++ L K + ++A L++EME KGV +V Y+ I+ D RL
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 257 -----------------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
++L DEM + PD +Y+ L+ +C ++ +DEAK
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++E + C PN T+ T I C + D+ ++F+E + + T L+ G
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 354 KKKKIKEAKGVIR-TIKKKFPPNVL 377
+ + A+ V + + PN++
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIM 471
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 138/290 (47%), Gaps = 6/290 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A ++M+ +V+ ++ ++ + + R D LF E+ K + P+ I+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVIT 297
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ C+ A LL++M + + VT+ +++ K+G EAE+L+ EM
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
K+ +D D+ Y+ I D + K + + M P+ ++YN L+ +CK + +D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
E +++ + + G N T+ T I+ + + D A VFK+ V P+ T L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 350 EGLVKKKKIKEAKGVIRTIKK-KFPPNVLRAWKKVEEELGLVPAPAVGDG 398
+GL K K+++A V +++ K P + +E G+ A V DG
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE---GMCKAGKVEDG 524
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LCN R + A R M E +V++FNAL+ A + + L+DE+
Sbjct: 305 LCNYER-------WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+ ++ PD +Y L+ C D+A + M +K VTY T++N K
Sbjct: 358 KR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRI 416
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFL 278
+E L+ EM ++G+ + Y I + D + + + +M G+ P+ ++YN L
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CKN +++A V+E L+ + P T+ I +C +G + + +F +
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
PD ++ G +K +EA + R +++ P
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGP 571
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + FD + ++M LG ++ ++N L+ C RS++ + +L +
Sbjct: 91 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P ++ LL +C A+ L+++M G T+T+TT+++ L+ A E
Sbjct: 151 Y--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L M ++G ++ Y V + GD + L+++M A ++ + + Y+ ++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK D+A ++ +E G PN T+ + I LC + A ++ + + P
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K+ EA+ + IK+ P++
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 151/324 (46%), Gaps = 17/324 (5%)
Query: 27 SVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD----IE 82
+V + K R E D AL++++ + P Y+ ++ L +R+SD +
Sbjct: 265 TVIDSLCKYRHE---DDALNLFTEMENKGVRPNVITYSSLISC--LCNYERWSDASRLLS 319
Query: 83 TLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA- 141
+IE N +T LI ++ + G A + +D+M + + ++++L+
Sbjct: 320 DMIERKINPNVVTFNA----LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C RL D+ +F+ + K + P+ ++Y L+ C + D+ +EL EM +G+
Sbjct: 376 CMHDRL-DEAKHMFELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELI 260
TVTYTT+++ ++ + + A+ ++ +M GV ++ YN + G E+ +
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 261 DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS 320
+ ++ + ++P +YN ++ CK +++ ++ L G P+ + T I C
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 321 GNFDKAYKVFKESVMVHKIPDFNT 344
G ++A +F++ +PD T
Sbjct: 554 GLKEEADALFRKMREDGPLPDSGT 577
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + LL + D + L +M+ G+ TY ++NC ++ A L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M K G + + + + +G L+D+M + G +PDTI++ L+
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ EA + + + + GC PN T+ + LC G+ D A+ + +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK 250
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 142/279 (50%), Gaps = 18/279 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI+S+G G+ + + + +M E G S+ ++N L+ S + +F E+
Sbjct: 188 SLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF-EVMDG 246
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +++K +C +G KA+E +ME K V+ +TY T++ Y + + +
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYN 276
L+ EME++G+++ +Y++ I GG ++ K + + M G + + Y
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVI----GGLCKQRKCMEAYAVFETMNQKGCRANVAIYT 362
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF----KE 332
L+ Y KN M+EA +++E ++ G P+A T+ + LC SG D ++F +
Sbjct: 363 ALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNK 422
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V ++ + L++GL K +I++A+ + + +K
Sbjct: 423 GVAINAM----FYASLIDGLGKAGRIEDAENLFEEMSEK 457
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A F+ M++ G +V + AL+ + +++ ++ LF+ + K PD ++Y +L
Sbjct: 341 EAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM-KNEGFEPDAVTYSVL 399
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C SG D +EL + NKGV + + Y ++++ L K G E+AE L+ EM +KG
Sbjct: 400 VNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGC 459
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D YN I G ++ L M + G ++ L+ K +EA K
Sbjct: 460 ARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIK 519
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + + G +P +FR LC G +A K+ + + IP+ + ++ L
Sbjct: 520 FWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLC 578
Query: 354 KKKKIKEA 361
K ++IKEA
Sbjct: 579 KAQRIKEA 586
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A+ ++ + P + Y+ + V L KS R D L + +N +
Sbjct: 375 EEAMRLFERMKNEGFEPDAVTYS--VLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYA 432
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G+AG + A F++M E G R +NA++ A
Sbjct: 433 SLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA-------------------- 472
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L H G D+AL L ME +G + T T+T +++ L+K+ EE
Sbjct: 473 -------------LAKH---GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEE 516
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + W +M KG+ VA++ + I G R +++D++ G+ P+T ++ ++
Sbjct: 517 AIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMIN 575
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
CK + + EA K+ +G+ + G I L +GN D K+ + +
Sbjct: 576 TLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGI 631
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%)
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
T+ D +++ + E++D GL + N L+ + +++E V+ ++ENG P+
Sbjct: 159 TFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSL 218
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ + L S + A KVF+ +PD T ++++G K K+++A R
Sbjct: 219 YTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRD 278
Query: 368 IKKK 371
++ K
Sbjct: 279 MEMK 282
>gi|388516039|gb|AFK46081.1| unknown [Lotus japonicus]
Length = 327
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D M+ D+M E G + FNA++ R L D+ I K
Sbjct: 31 LIEATILKGGVDDVMKLLDEMIESGLRPDMFIFNAVVGGMCREGLVDRAFEFIRYISAK- 89
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD ISY +LL+ + + +L+++M +KG E VTY+ +++ L + G EEA
Sbjct: 90 GYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSLCRDGKVEEA 149
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-ELIDEMRDAGLKPDTISYNFLMTC 281
L M+++G+ D +Y+ I L E ++ M G PD ++YN +++
Sbjct: 150 VSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILST 209
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CKN DEA K++E L E GC PN +++ T L SG+ +A + E + PD
Sbjct: 210 LCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSKDIDPD 269
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
T L+ L + + +A ++ ++ + P+V+
Sbjct: 270 EITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVI 306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 3/249 (1%)
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
P S++++ L+ A D V L DE+ + L PD + ++ C G D+A
Sbjct: 22 PISLVTYTILIEATILKGGVDDVMKLLDEMIES-GLRPDMFIFNAVVGGMCREGLVDRAF 80
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
E + + KG ++Y+ +L L Q E+ E+L S+M KG + +V Y++ I++
Sbjct: 81 EFIRYISAKGYAPDVISYSILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYSILISSL 140
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G E L+ M++ GL PD SY+ L+ +CK +D A + E + +GC P+
Sbjct: 141 CRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDI 200
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK-KKIKEAKGVIR 366
+ T + LC +G D+A K+F++ V P+ ++ L L KI+ ++
Sbjct: 201 VNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILE 260
Query: 367 TIKKKFPPN 375
+ K P+
Sbjct: 261 MLSKDIDPD 269
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Query: 127 GTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G +V++++ L+ + C ++ + V +L ++ K+ L+PD SY L+ + C D
Sbjct: 125 GCEPNVVTYSILISSLCRDGKVEEAVSLL--KVMKEQGLTPDAYSYDPLIAAFCKESRVD 182
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A+E L M + G V Y T+L+ L K G A+EA +++ ++ + G +V++YN
Sbjct: 183 LAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLF 242
Query: 246 TNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ + G R +I EM + PD I+YN L++C C++ M+D+A ++ +E +
Sbjct: 243 SALWSSGHKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQ 302
Query: 305 PNATTFRTWIYHL 317
P+ ++ + L
Sbjct: 303 PSVISYNIVLLGL 315
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 12/243 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEP 98
D+A + +S +P Y+ + +R L +++ D E L+ S +P +
Sbjct: 77 DRAFEFIRYISAKGYAPDVISYS--ILLRGLLNQRKWEDGEKLMSDMLSKGCEPNVVTYS 134
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
L I S + G + A+ M E G S++ L+ A C SR+ + I F E
Sbjct: 135 IL---ISSLCRDGKVEEAVSLLKVMKEQGLTPDAYSYDPLIAAFCKESRV--DLAIEFLE 189
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
PD ++Y +L + C +G +D+AL++ ++ G +Y T+ + L+ G
Sbjct: 190 SMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEKLGEVGCPPNVSSYNTLFSALWSSG 249
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+ A + EM K +D D YN I+ ++ EL+ +M + +P ISYN
Sbjct: 250 HKIRALGMILEMLSKDIDPDEITYNSLISCLCRDAMVDQAIELLVDMESSVYQPSVISYN 309
Query: 277 FLM 279
++
Sbjct: 310 IVL 312
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y+ D + K R +ES +D + ++ + + G D A++ F++
Sbjct: 166 YSYDPLIAAFCKESRVDLAIEFLESMISDGCLPDIVNYNTILSTLCKNGKADEALKIFEK 225
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+ E+G P +V S+N L A S + + E+ K ++ PD+I+Y L+ C
Sbjct: 226 LGEVGCPPNVSSYNTLFSALWSSGHKIRALGMILEMLSK-DIDPDEITYNSLISCLCRDA 284
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
D+A+ELL +ME+ + + ++Y VL L K +A
Sbjct: 285 MVDQAIELLVDMESSVYQPSVISYNIVLLGLSKVHRISDA 324
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 142/279 (50%), Gaps = 18/279 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI+S+G G+ + + + +M E G S+ ++N L+ S + +F E+
Sbjct: 190 SLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF-EVMDG 248
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +++K +C +G KA+E +ME K V+ +TY T++ Y + + +
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK-----ELIDEMRDAGLKPDTISYN 276
L+ EME++G+++ +Y++ I GG ++ K + + M G + + Y
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVI----GGLCKQRKCMEAYAVFETMNQKGCRANVAIYT 364
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF----KE 332
L+ Y KN M+EA +++E ++ G P+A T+ + LC SG D ++F +
Sbjct: 365 ALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNK 424
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V ++ + L++GL K +I++A+ + + +K
Sbjct: 425 GVAINAM----FYASLIDGLGKAGRIEDAENLFEEMSEK 459
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 3/248 (1%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A F+ M++ G +V + AL+ + +++ ++ LF+ + K PD ++Y +L
Sbjct: 343 EAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM-KNEGFEPDAVTYSVL 401
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C SG D +EL + NKGV + + Y ++++ L K G E+AE L+ EM +KG
Sbjct: 402 VNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGC 461
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
D YN I G ++ L M + G ++ L+ K +EA K
Sbjct: 462 ARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIK 521
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + + G +P +FR LC G +A K+ + + IP+ + ++ L
Sbjct: 522 FWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE-TAFEDMINTLC 580
Query: 354 KKKKIKEA 361
K ++IKEA
Sbjct: 581 KAQRIKEA 588
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A+ ++ + P + Y+ + V L KS R D L + +N +
Sbjct: 377 EEAMRLFERMKNEGFEPDAVTYS--VLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYA 434
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G+AG + A F++M E G R +NA++ A
Sbjct: 435 SLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDA-------------------- 474
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L H G D+AL L ME +G + T T+T +++ L+K+ EE
Sbjct: 475 -------------LAKH---GKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEE 518
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + W +M KG+ VA++ + I G R +++D++ G+ P+T ++ ++
Sbjct: 519 AIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMIN 577
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
CK + + EA K+ +G+ + G I L +GN D K+ + +
Sbjct: 578 TLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGI 633
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERL--WSEMEKKGVDLDVAAYNVRITNTYGGDPERL 256
V+++ T VL + + E A R W+ +KK V ++ T+ D ++
Sbjct: 110 VKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKI 169
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+ + E++D GL + N L+ + +++E V+ ++ENG P+ T+ +
Sbjct: 170 RLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNG 229
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
L S + A KVF+ +PD T ++++G K K+++A R ++ K
Sbjct: 230 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMK 284
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 132/277 (47%), Gaps = 9/277 (3%)
Query: 99 YLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
Y N++ + + G A FD + + G SV+SFN L+ R D+
Sbjct: 137 YFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDE-GFRLKS 195
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ PD +Y +L+ C D+A EL NEM ++G+ VT+TT+++ K G
Sbjct: 196 AMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNG 255
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDAGLKPDTI 273
+ A ++ +M +G D+ YN I YG GD ++++ LIDEM GLKPD I
Sbjct: 256 MVDSAMEIYKQMLSQGFSPDLITYNTLI---YGLCKKGDLKQVRALIDEMSMNGLKPDKI 312
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y L+ CK ++ A + + + + + + + LC G D A K+F+E
Sbjct: 313 TYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREM 372
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ V PD T +++ KK ++ A +++ +++
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQR 409
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + D A F++M + G + ++F L+ ++ + D ++ ++ +
Sbjct: 212 LINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQ- 270
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD I+Y L+ C G + L++EM G++ +TYTT+++ K+G+ E A
Sbjct: 271 GFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETA 330
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
M K+ + LD AY ++ G + +++ EM GLKPD +Y ++
Sbjct: 331 FEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINE 390
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATT 309
+CK + A ++ + ++ +G P T
Sbjct: 391 FCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 3/179 (1%)
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ E+ G + + V++ K+G A+ ++ + K G+ V ++N + N
Sbjct: 122 DFYKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNT-LMNG 180
Query: 249 Y--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
Y GD + L M +G++PD +Y+ L+ CK +DEA +++ + + G PN
Sbjct: 181 YIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPN 240
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
TF T I C +G D A +++K+ + PD T L+ GL KK +K+ + +I
Sbjct: 241 GVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALI 299
>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
Length = 454
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 14/292 (4%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+++ + G D A T +M V ++N ++ ++R + F+ +P+
Sbjct: 14 CYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE 73
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD ++Y LL C +G +A L ME G+ + VTYTT+++ K E
Sbjct: 74 -----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 128
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD--PERLKELIDEMRDAGLKPDTISYNFL 278
A L M + V +Y I N + ++ +L +EM+ AG KPD ++YN L
Sbjct: 129 TAYGLLQLMASRKCSPTVYSY-CSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTL 187
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C + + EAK + + EN P+ TF I LC + +A+ +F+
Sbjct: 188 IHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGC 247
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP--PNVLRAWKKVEEELG 388
PD T +LV L ++K++ A V+R +P P + + + ELG
Sbjct: 248 APDLVTHTVLVSKLCIRRKLRPALSVVR----NYPACPEAVILYTPIFRELG 295
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 44/315 (13%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-C 142
L+ S K P + C++I + D A + F++M G +++N L+ C
Sbjct: 136 LMASRKCSPTVYS---YCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 192
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
+ RL++ +L + + PDKI++ L++ C + +A L M +G
Sbjct: 193 VKQRLHEAKDLLTVMVENSFQ--PDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPD 250
Query: 203 TVT---------------------------------YTTVLNCLYKQGNAEEAERLWSEM 229
VT YT + L ++ + A RL +M
Sbjct: 251 LVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKM 310
Query: 230 EKKGVDLDVAAYNVRITNTYGGDPE---RLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
++GV +V Y GD + R M + G++PD ++YN L+ +CK
Sbjct: 311 ARRGVAPNVVTYTAFFKGL--GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKAN 368
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+D A+K+ ++++G PN T+ T + H C G + ++ V + PD T
Sbjct: 369 RLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWS 428
Query: 347 LLVEGLVKKKKIKEA 361
LV GL + ++ A
Sbjct: 429 TLVAGLFRVGQVDAA 443
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ +SY L+K+ C +G DKA + EM + + TY V++ L K A
Sbjct: 8 PNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEF 67
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ M + DV YN + G + L M AG+ P ++Y L+ +CK
Sbjct: 68 FETMPEP----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCK 123
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ A + + + CSP ++ + I LC + D+AY++F+E + PD T
Sbjct: 124 MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVT 183
Query: 345 VKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPN 375
L+ GL K+++ EAK ++ ++ F P+
Sbjct: 184 YNTLIHGLCVKQRLHEAKDLLTVMVENSFQPD 215
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 130/308 (42%), Gaps = 5/308 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R + +L S + + LI + + F+ A M +
Sbjct: 86 LCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPT 145
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V S+ +++ ++R D+ LF+E+ K PD+++Y L+ C +A +LL
Sbjct: 146 VYSYCSIINGLCKNRKVDQAYQLFEEM-KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLL 204
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
M + +T+T ++ L +EA L+ M K+G D+ + V ++
Sbjct: 205 TVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKL--C 262
Query: 252 DPERLKELIDEMRDAGLKPD-TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+L+ + +R+ P+ I Y + + D A ++ + + G +PN T+
Sbjct: 263 IRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTY 322
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ L +AY+ F+ + PD +LV+G K ++ A+ ++R + +
Sbjct: 323 TAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQ 382
Query: 371 K-FPPNVL 377
PPN++
Sbjct: 383 SGLPPNIV 390
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 14/261 (5%)
Query: 70 RRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
+RL ++K + ++E+ KIT LI A F M + G
Sbjct: 195 QRLHEAKDL--LTVMVENSFQPDKIT----FTALIEGLCTTDRIKEAFVLFQGMAKQGCA 248
Query: 130 RSVISFNALLF-ACTRSRLYDKVPILFDEIPKKYNLSPDK-ISYGLLLKSHCDSGSSDKA 187
+++ L+ C R +L + ++ + Y P+ I Y + + D+A
Sbjct: 249 PDLVTHTVLVSKLCIRRKLRPALSVV-----RNYPACPEAVILYTPIFRELGRRRGFDRA 303
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LL +M +GV VTYT L A R + M ++G++ D+ AYNV +
Sbjct: 304 ARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDG 363
Query: 248 TYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + E ++ M +GL P+ ++YN L+ +C+ ++ ++ + G P+
Sbjct: 364 FCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPD 423
Query: 307 ATTFRTWIYHLCGSGNFDKAY 327
T+ T + L G D AY
Sbjct: 424 VATWSTLVAGLFRVGQVDAAY 444
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
C PNA ++ + LC +G DKA E +PD T ++++ L K ++I A
Sbjct: 6 CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRA 64
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 37/306 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI+S+G+ GM + + + +M E G ++ ++N L+ + D +F E+ +
Sbjct: 192 SLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMES 250
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y ++K +C +G + KALE L ME KG+E +TY T++ Y +
Sbjct: 251 GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSS 310
Query: 222 AERLWSEMEKKGVDL-----------------------------------DVAAYNVRIT 246
L+ EM++KG+ + +VA Y V I
Sbjct: 311 CVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 370
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E L+ M D G PD ++Y+ ++ CKN ++EA ++ NG +
Sbjct: 371 GYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAI 430
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N+ + + I L +G D+A ++F+E D L++ K K+ EA +
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALF 490
Query: 366 RTIKKK 371
+ ++++
Sbjct: 491 KRMEEE 496
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 8/263 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL--FACTRSRLYDKVPILFDEIPK 160
+I + G + F+ M G+ +V + L+ +A T S + D + +L I +
Sbjct: 333 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGS-VEDAIRLLHRMIDE 391
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+N PD ++Y +++ C +G ++A++ G+ + ++ Y+++++ L K G +
Sbjct: 392 GFN--PDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVD 449
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEM-RDAGLKPDTISYNFL 278
EAERL+ EM +KG D YN I T G + L M + G +Y L
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTIL 509
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ K +EA K+++ + + G +P A R LC SG +A K+ E +
Sbjct: 510 ISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGV 569
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
I D + ++ L K +IKEA
Sbjct: 570 ILD-AACEDMINTLCKAGRIKEA 591
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ V L K+ R + ++ + + + +LI G+AG D A R F++M E
Sbjct: 402 VVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G R +NAL+ A T+ G D+
Sbjct: 462 GCTRDSYCYNALIDAFTK------------------------------------HGKVDE 485
Query: 187 ALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
AL L M E +G + T TYT +++ ++K+ EEA +LW M KG+ A
Sbjct: 486 ALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALS 545
Query: 246 TN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
T G R +++DE+ G+ D + + T CK + EA K+ +G+ E G
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACEDMINT-LCKAGRIKEACKLADGITERG 602
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNV----RITNTYGGDPERLKELIDEMRDAGLKP 270
K G EE +W +M++ G++ + YN ++ + ER+ E+++ R +KP
Sbjct: 199 KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR---IKP 255
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++YN ++ YCK +A + +E G + T+ T I +F ++
Sbjct: 256 DVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALY 315
Query: 331 KESVMVHK---IPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNV 376
+E M K +P + L++ GL K+ K+ E V I+K PNV
Sbjct: 316 QE--MDEKGLQVPP-HAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNV 362
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 252 DPERLKELIDEMRDAGLKPDTIS-YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
D +R++ + E+R P T+S N L+ + K M++E V+ ++ENG P T+
Sbjct: 167 DVDRIRFICSEIRKFEF-PMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTY 225
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ L + D A +VF+ PD T +++G K + ++A +R ++
Sbjct: 226 NFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMET 285
Query: 371 K 371
K
Sbjct: 286 K 286
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 5/299 (1%)
Query: 82 ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
+ L E +++ + E LI Y + D A+R D+M +G ++ NAL+
Sbjct: 309 KVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALING 368
Query: 142 -CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
C ++ + +L + ++L P+ SY L+ C G KA+ + NEM G++
Sbjct: 369 YCKNGQVSEAERLLMRMVD--WDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQ 426
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKEL 259
VT+ ++L L + G E+A +W M K+GV D +Y + + G+ R L
Sbjct: 427 SNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALAL 486
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+++ G T ++N ++ +CK E M EA++ + ++E G P+ T+RT I C
Sbjct: 487 WNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCK 546
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
GN ++A+KV ++ +P L+ GL K KK +E ++ + K PNV+
Sbjct: 547 LGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVV 605
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + G + A + ++M++ S+ +N+L+ +S+ +V L E+ K
Sbjct: 540 LIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLK- 598
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSP+ ++YG L+ CD G DKA +M KG + + +++ LY+ G +EA
Sbjct: 599 GLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEA 658
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMT 280
L +M V LD ++ R+ G D +++ + +DE + P+++ YN +
Sbjct: 659 NMLLQKMVNLDVFLDHGYFD-RLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIA 717
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ +D+AKK++ L G SP+ T+ T I+ +GN + A+ + E + P
Sbjct: 718 GLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAP 777
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
+ T L+ GL K + A+ + + K PNV+
Sbjct: 778 NIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVI 815
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 44/309 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+++ Y + GM +A+ FD M +LG S+ S N LL + R +++D I +
Sbjct: 154 ILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI-NRL 212
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN-CL-------- 213
+ PD + +++ ++C G + A++ + EM+ G E+ VTY ++++ C+
Sbjct: 213 GIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERA 272
Query: 214 --------------------------YKQGNAEEAERLWSEMEK-KGVDLDVAAYNVRIT 246
+Q EEAE++ EME+ +G+ LD AY V I
Sbjct: 273 EMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLID 332
Query: 247 N----TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
D RL+ DEM + GL+ + N L+ YCKN + EA+++ + +
Sbjct: 333 GYCRVCKMDDAVRLR---DEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P + ++ T + C G KA V+ E + V + T L++GL + ++A
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449
Query: 363 GVIRTIKKK 371
V + K+
Sbjct: 450 HVWHLMLKR 458
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 3/203 (1%)
Query: 39 FDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP 98
D K D SK ++ P S Y ++ + L KS + D + + S
Sbjct: 688 LDSQKIADTLDESSKSFSLPNSVVY--NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
C LI Y AG + A D+M + G ++I++NAL+ +S D+ LFD++
Sbjct: 746 TYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K L+P+ ISY +L+ +C +G++ +AL+L N+M +G+ + +TY+ ++ KQG+
Sbjct: 806 HLK-GLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGD 864
Query: 219 AEEAERLWSEMEKKGVDLDVAAY 241
+A L EM + D ++A +
Sbjct: 865 MGKATNLLDEMRELFADQNIAKF 887
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 17/291 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A + M E G +VI + ++ + R D+ +L + K
Sbjct: 610 LIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANML---LQKMV 666
Query: 163 NLSPDKISYGLLLKSH-CDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
NL + +G + H D G+ D K + L+E +V Y + L K G
Sbjct: 667 NLDV-FLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKV 725
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
++A++++S + +G D Y I + G+ L DEM GL P+ I+YN L
Sbjct: 726 DDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNAL 785
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN----FDKAYKVFKESV 334
+ CK+ +D A+K+++ L G +PN ++ I C +GN D K+ KE +
Sbjct: 786 INGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGI 845
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNVLRAWKKVE 384
P T L+ G K+ + +A ++ +++ F N+ + K VE
Sbjct: 846 S----PSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVE 892
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 129/316 (40%), Gaps = 42/316 (13%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+ + G F A+ ++ + G RS +FN ++ + + F+ + K
Sbjct: 468 CTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRM-K 526
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD ++Y L+ +C G+ ++A ++ +ME + + + Y +++ L+K
Sbjct: 527 ELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTR 586
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNF 277
E L SEM KG+ +V Y I D RL + +M + G P+ I +
Sbjct: 587 EVMDLLSEMCLKGLSPNVVTYGTLIAGW--CDEGRLDKAFTAYFDMIEKGFAPNVIICSK 644
Query: 278 LMTCYCKNEMMDEA--------------------------------KKVYEGLEENGCS- 304
+++ + +DEA +K+ + L+E+ S
Sbjct: 645 IVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSF 704
Query: 305 --PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
PN+ + I LC SG D A K+F ++ PD T L+ G + +A
Sbjct: 705 SLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAF 764
Query: 363 GVI-RTIKKKFPPNVL 377
+ +K+ PN++
Sbjct: 765 SLRDEMLKRGLAPNII 780
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 130/312 (41%), Gaps = 55/312 (17%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+ +A M+D T ++EL TP S ++++L+ +++++ +F++
Sbjct: 98 CKLVHILSRARMYDE---TRSYLNELVTP-SKNNYSSLV-------VWNELVRVFED--- 143
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ SP + ++LK +C+ G AL + + M G + + +L+ L ++G +
Sbjct: 144 -FKFSPT--VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESS 200
Query: 221 EA-------ERL--------------------W--------SEMEKKGVDLDVAAYNVRI 245
A RL W EM+ G +L+V YN I
Sbjct: 201 NAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLI 260
Query: 246 TNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN-GC 303
GD ER + ++ M + G+ + ++ L+ YC+ ++EA+KV +E + G
Sbjct: 261 DGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGM 320
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-K 362
+ + I C D A ++ E + V + L+ G K ++ EA +
Sbjct: 321 VLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAER 380
Query: 363 GVIRTIKKKFPP 374
++R + P
Sbjct: 381 LLMRMVDWDLEP 392
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 141/293 (48%), Gaps = 4/293 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L ++K F+++++L++ + + L + + SYG++G F ++ F+ M E+G
Sbjct: 226 LGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPG 285
Query: 132 VI--SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+I ++N++L + +++ D LF ++ +S + ++Y +++ + A++
Sbjct: 286 LIDTAYNSVLVSLVKNKKLDMAENLFAQMINN-GVSCNNLTYTSMIQCFFLKEKMEDAMK 344
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
LL++M VTYT V++ L K+ E+A + +M + G + ++ YN I
Sbjct: 345 LLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLC 404
Query: 250 G-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
PE EL+ M G+ P+ +Y L CK +D AK+++ G PN
Sbjct: 405 AVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRV 464
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ T + C +A + KE PD T L++GLV+ ++ +A
Sbjct: 465 TYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDA 517
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 121/284 (42%), Gaps = 41/284 (14%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A+ M++ G P ++ ++ L + R D+ +F+E + L P++++Y
Sbjct: 410 EEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALAR-GLKPNRVTYNT 468
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LL +C +A+++L EM VTYTT++ L + +A R+ EME KG
Sbjct: 469 LLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG 528
Query: 234 VDLDVAAYNV------RITN------------------------------TYGGDPERLK 257
D++ N+ R+ N + G+ E +
Sbjct: 529 YDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQ 588
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
L+ EM + G P+ +YN ++ +C+ +D+A + + ENG P+ ++ I
Sbjct: 589 ALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEF 648
Query: 318 CGSGNFDKAYKVF----KESVMVHKIPDFNTVKLLVEGLVKKKK 357
G A +++ + V+++ P L EGLV+ ++
Sbjct: 649 HNQGRTQDADQLYATALERGVVLNPKPVIQEPDELPEGLVRSQE 692
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 119/243 (48%), Gaps = 21/243 (8%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L+PD + L L++ D+ ++ + + ++ E G + T Y T+++ L + E
Sbjct: 180 DLNPDAVVKVLNLQT--DAQNALRFFQWADKQE--GYDHNTDAYFTMIDILGRAKMFTEL 235
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDE---MRDAGLKPDTI--SYNF 277
+ L +M+ +G ++ + + + + G R KE ++ M++ G +P I +YN
Sbjct: 236 QSLLQKMQTQGREITRSMLHSFVMSY--GRSGRFKESLEAFNLMKEMGYEPGLIDTAYNS 293
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ KN+ +D A+ ++ + NG S N T+ + I + A K+ + + +
Sbjct: 294 VLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNN 353
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV---------LRAWKKVEEEL 387
PD T +++ L K+K I++A GV++ +++ PN+ L A ++ EE L
Sbjct: 354 YAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEAL 413
Query: 388 GLV 390
LV
Sbjct: 414 ELV 416
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 2/171 (1%)
Query: 75 SKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
S+ ++ L E H+ND Y LI+ Q A+R D+M+ G + +
Sbjct: 477 SRLIEAMDILKEMHQNDCTPDHVTY-TTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDT 535
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
N L R + I + + K + Y L + +G ++A LL EM
Sbjct: 536 LNILARGLARVGNHKDASIFYRRM-KDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEM 594
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
NKG TY T++ +QG ++A+ + + M + G+ D +YN+ I
Sbjct: 595 INKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILI 645
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+DI + ++ +P Y ++ L + + D + + +N L
Sbjct: 481 EAMDILKEMHQNDCTPDHVTYTT--LIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNI 538
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC--TRSRLYDKVPILFDEIPK 160
L R + G A + +M + G S + L C T + + +L++ I K
Sbjct: 539 LARGLARVGNHKDASIFYRRMKDRGFAYSASDY-YLAIHCLSTAGEMEEAQALLYEMINK 597
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y SP+ +Y ++K C G D A +LN M G+ T +Y ++ + QG +
Sbjct: 598 GY--SPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQ 655
Query: 221 EAERLWSEMEKKGVDLD 237
+A++L++ ++GV L+
Sbjct: 656 DADQLYATALERGVVLN 672
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + ++ A + FD+M G ++FN+LL ++R +D+ + E+ ++
Sbjct: 231 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM-ERV 289
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++Y L+ S+ G ++A+ L EME KG++ VTYTT+++ L + G + A
Sbjct: 290 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 349
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ EM + G ++ YN +++ G PE + + DE R AG PD +++N L+
Sbjct: 350 IVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA-VFDEFRSAGFVPDIVTWNTLLA 408
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +N + E V++ +++ G P T+ + I G FD A +++K + P
Sbjct: 409 VFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYP 468
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D +T ++ L + + ++A+ + ++++
Sbjct: 469 DVSTYNAVLSALARGGRWEQAEKLFAEMEER 499
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + + K I + +LI SY + G+FD AM+ + +M E G V ++NA+
Sbjct: 417 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV 476
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L A R +++ LF E+ ++ + PD+ SY LL ++ ++ DK L +++ ++
Sbjct: 477 LSALARGGRWEQAEKLFAEMEER-DCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 535
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
+E T++ K N EAE+ + E+ +K LD+ N ++ YG
Sbjct: 536 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVS-IYGKNRMVRKV 594
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
GD E+ + ++ E++ +G++PD SYN ++
Sbjct: 595 EKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYA 654
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + M EA +++ ++ +G P+ T+ ++ + F++A ++ + V P+
Sbjct: 655 YGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPN 714
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP 373
T +VEG + K+ +AK + + + P
Sbjct: 715 ERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHP 746
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 143/310 (46%), Gaps = 17/310 (5%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+R +A++ R ++ L+++ P Y L+ ++ +AG F A+ F +M + G
Sbjct: 129 AIRVMARAGRLAEASALLDAA---PGPDAGAYTA-LVSAFSRAGRFRDAVAVFRRMVDSG 184
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIP------KKYNLSPDKISYGLLLKSHCDS 181
+++++N +L +Y K+ + + E+ K++ ++PD+ +Y L+
Sbjct: 185 VQPAIVTYNVVL------HVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRR 238
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
+A ++ +EM+ G E VT+ ++L+ K +EA + EME+ G V Y
Sbjct: 239 ALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTY 298
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
N I++ G E+ L EM G+KPD ++Y L++ + +D A Y+ +
Sbjct: 299 NSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 358
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NGC PN T+ I G F + VF E +PD T L+ + E
Sbjct: 359 NGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE 418
Query: 361 AKGVIRTIKK 370
GV + +KK
Sbjct: 419 VSGVFKEMKK 428
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 154/328 (46%), Gaps = 14/328 (4%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTV---RRLAKSKRFSDIETLIESHKNDP-KITQEP 98
+ +++ +S+ +H +P RY + + RR A K + + +++ +P K+T
Sbjct: 208 EVVELVASMKEHGVAP--DRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVT--- 262
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+L+ YG+A D A+ +M+ +G P SV+++N+L+ + + L ++ L E+
Sbjct: 263 -FNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM 321
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + PD ++Y L+ +G D A+ +EM G + TY ++ +G
Sbjct: 322 EVK-GMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGK 380
Query: 219 AEEAERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
E ++ E G D+ +N + + G D E + + EM+ AG P+ +Y
Sbjct: 381 FPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE-VSGVFKEMKKAGYIPERDTYV 439
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L++ Y + + D A ++Y+ + E G P+ +T+ + L G +++A K+F E
Sbjct: 440 SLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEER 499
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
PD + L+ K++ + K +
Sbjct: 500 DCKPDEYSYSSLLHAYANAKRLDKMKAL 527
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 42/313 (13%)
Query: 97 EPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
+P LC LI+ +G G F M FD+ G ++++N LL ++ L +V
Sbjct: 362 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSG 421
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+F E+ KK P++ +Y L+ S+ G D A+++ M G+ TY VL+ L
Sbjct: 422 VFKEM-KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSAL 480
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKP- 270
+ G E+AE+L++EME++ D +Y+ + + Y +++K L D++ ++P
Sbjct: 481 ARGGRWEQAEKLFAEMEERDCKPDEYSYS-SLLHAYANAKRLDKMKALSDDIYSERIEPH 539
Query: 271 ----------------------------------DTISYNFLMTCYCKNEMMDEAKKVYE 296
D N +++ Y KN M+ + +K+
Sbjct: 540 NWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILS 599
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
++E+ + +A T+ + ++ G+ +K + E PD + ++ +K
Sbjct: 600 LMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKG 659
Query: 357 KIKEAKGVIRTIK 369
++KEA + +K
Sbjct: 660 QMKEASRLFSEMK 672
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 3/176 (1%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV--RITNTYGGDPERLKELIDE 262
YT +++ + G +A ++ M GV + YNV + + + + EL+
Sbjct: 156 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M++ G+ PD +YN L++C + + EA +V++ ++ +G P+ TF + + +
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
D+A +V +E V P T L+ VK +++A + + ++ K P+V+
Sbjct: 276 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 144/287 (50%), Gaps = 10/287 (3%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
++ P L +L++ G+ G+ + + +M +V++F+ ++ + + K
Sbjct: 195 LSCNPMLVSLVKE-GRIGVVESV---YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGD 250
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ +++ K + SP I+Y ++ +C +G KA LL EM K + +T+ +++
Sbjct: 251 VVEDM-KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
+ N A++++ EM+++G+ +V YN I G + L D+M GLKP+
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNV 369
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ +CK +M+ EA+++ + + + G +PN TF T I +G D A+ +
Sbjct: 370 VTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSM 429
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRA 379
+ P+ +T L+ G ++ +KEA R + K+ N L+A
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEA----RKLAKEMEGNGLKA 472
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 148/319 (46%), Gaps = 14/319 (4%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
D+ + L K +F ++E K P + +I Y +AG A +
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN---TIIDGYCKAGKMFKADALLKE 289
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M + I+FN L+ R +F+E+ ++ L P+ ++Y L+ C +G
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ-GLQPNVVTYNSLINGLCSNG 348
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D+AL L ++M G++ VTY ++N K+ +EA + ++ K+G+ +V +N
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 243 VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
I + YG G + L M D G+ P+ +YN L+ +C+ + EA+K+ + +E
Sbjct: 409 TLI-DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI---PDFNTVKLLVEGLVKKKK 357
NG + T+ + LC G KA ++ E ++ K + T +L++G K K
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527
Query: 358 IKEAKGVIR-TIKKKFPPN 375
++EA ++ ++K PN
Sbjct: 528 LEEANRLLNEMLEKGLIPN 546
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 5/212 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G D A+ D+M +G +V+++NAL+ + ++ + + D+I K+
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR- 398
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ I++ L+ ++ +G D A L + M + GV TY ++ ++GN +EA
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDE---MRDAGLKPDTISYNFL 278
+L EME G+ D+ YN+ + G+ + L+DE M G + + ++YN L
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVL 518
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ +C ++EA ++ + E G PN TT+
Sbjct: 519 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 164/384 (42%), Gaps = 64/384 (16%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+SS + Y +P S + T+ +L + +S ++T+++ + +P L +L S
Sbjct: 32 FSSPNSTYTTPNSHTFDTP-TISQLIAKQHWSKLKTIVK--ETNP----SSLLQHLFNSE 84
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
Q + + + E G +V F LL ++ Y+K+ L D K + S
Sbjct: 85 AQPDLILCYFKWTQK--EFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNS 142
Query: 168 KI--------SYG--------LLLKSHCDSGSSDKALE---------------------- 189
I S+G +L+ ++ +G D ALE
Sbjct: 143 TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLV 202
Query: 190 -------------LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
+ EM + + V VT+ V+N L K G ++A + +M+ G
Sbjct: 203 SLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSP 262
Query: 237 DVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
V YN I + Y G + L+ EM + P+ I++N L+ +C++E + AKKV
Sbjct: 263 SVITYNT-IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+E ++ G PN T+ + I LC +G D+A + + + P+ T L+ G K
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
Query: 355 KKKIKEAKGVIRTI-KKKFPPNVL 377
KK +KEA+ ++ I K+ PNV+
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVI 405
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +YG+AG D A M + G +V ++N L+ R + L E+
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN- 468
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEM---ENKGVEVTTVTYTTVLNCLYKQGNA 219
L D ++Y +L+ + C G + KA+ LL+EM E KG VTY ++ +G
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKL 528
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPD 271
EEA RL +EM +KG+ + Y++ L DEM + G PD
Sbjct: 529 EEANRLLNEMLEKGLIPNRTTYDI---------------LRDEMMEKGFIPD 565
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 137/266 (51%), Gaps = 2/266 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI++ AG F+QM + G +V S+N ++ ++ + DK F E+ K
Sbjct: 433 LIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYK- 491
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +++ L+ +C G K+ +LL + G + T++++++ L + E+A
Sbjct: 492 GIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDA 551
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+SEM G+ + YN+ I + GD R +L+ +M+ G+ PD S+N L+
Sbjct: 552 LGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQS 611
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+ +++AKK++ + G P+ T+ +I C SG F++A ++F +PD
Sbjct: 612 FCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPD 671
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRT 367
T ++++ LVK+ + + A+ + +T
Sbjct: 672 SFTCNIILDALVKQDQFEAAQKIAKT 697
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 158/388 (40%), Gaps = 50/388 (12%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLA------KSKRFSDIETLIE 86
S L+++ +P L Y VS + +A+D +V+ + K +E L +
Sbjct: 118 SVLQNQENPLYPLKFYIWVSN-----MDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKD 172
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
+ +I +E LC LI S+G+ G+ + F Q+ LG S +NA++ A +S
Sbjct: 173 IKASGYRINEE-LLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSN 231
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
D + F ++ N PD+ +Y +L+ C SG D+AL L+ +ME G TY
Sbjct: 232 SLDLAYLKFQQMSAD-NCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTY 290
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEM-- 263
T +++ + +EA R+ M+ + V A I + P + EL E
Sbjct: 291 TILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIE 350
Query: 264 -----------------------RDAGL----------KPDTISYNFLMTCYCKNEMMDE 290
R+AG KPD+ ++N M C K ++E
Sbjct: 351 REPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNE 410
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
+ + E G +T+ I L +G + F + V + + + ++++
Sbjct: 411 VCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVID 470
Query: 351 GLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
K + +A + ++ K PPN++
Sbjct: 471 CFCKTSMMDKATNTFKEMQYKGIPPNLV 498
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++ + + ++ +L+ +G++ TY ++ LY G E
Sbjct: 390 PDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHY 449
Query: 226 WSEMEKKGVDLDVAAYNVRI------------TNTY------------------------ 249
+++M K G+ +V +YN+ I TNT+
Sbjct: 450 FNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCK 509
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
GG+ + ++L+ + + G KPD +++ ++ C+ + +++A + + G SPNA T
Sbjct: 510 GGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVT 569
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ I+ LC G+ ++ K+ ++ PD + L++ + K+++AK + ++
Sbjct: 570 YNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSM 628
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 105/253 (41%), Gaps = 45/253 (17%)
Query: 93 KITQEPYLCNL------IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL------- 139
++ ++ LCN+ I + + M D A TF +M G P ++++FN L+
Sbjct: 452 QMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGG 511
Query: 140 -----------------------FA------CTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
F+ C ++ D + + + + LSP+ ++
Sbjct: 512 EICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMV--MWGLSPNAVT 569
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ S C G ++++LL +M+ G+ ++ ++ + G E+A++L+S M
Sbjct: 570 YNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSML 629
Query: 231 KKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
G+ D Y I G KEL M G PD+ + N ++ K + +
Sbjct: 630 SLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFE 689
Query: 290 EAKKVYEGLEENG 302
A+K+ + E G
Sbjct: 690 AAQKIAKTCSEWG 702
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI S G +M+ +M G V SFNAL+ + R + LF +
Sbjct: 573 LIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSM-LSL 631
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y +K C SG ++A EL ME G + T +L+ L KQ E A
Sbjct: 632 GLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAA 691
Query: 223 ERLWSEMEKKGVDLDVAA 240
+++ + G+ ++ AA
Sbjct: 692 QKIAKTCSEWGILVNFAA 709
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 137/314 (43%), Gaps = 22/314 (7%)
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+R D+ IE + + T+ P+ SY + R FD +D++ SV F
Sbjct: 73 RRLKDVNRAIEYFRWYERRTELPHC---PESYNSLLLVMARCRNFDALDQILGEMSVAGF 129
Query: 136 NALLFACTRSRL-----------YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
+ C L YD V ++ +K+ P +Y L+ + S
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMM-----RKFKFRPAFSAYTTLIGAFSAVNHS 184
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D L L +M+ G E T +TT++ K+G + A L EM+ +D D+ YNV
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 245 ITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I +++G G + + E+ GLKPD ++Y ++ CK +DEA +++E LE+N
Sbjct: 245 I-DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P + T I +G FD+AY + + IP ++ L K K+ EA
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 363 GVIRTIKKKFPPNV 376
V +KK PN+
Sbjct: 364 KVFEEMKKDAAPNL 377
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 5/266 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELG 127
+R AK R +L++ K+ + + L N+ I S+G+ G D A + F +++ G
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSS-SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+++ +++ ++ D+ +F+ + K + P +Y ++ + +G D+A
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEA 327
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LL KG + + Y +L CL K G +EA +++ EM+K +++ YN+ I
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDM 386
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + EL D M+ AGL P+ + N ++ CK++ +DEA ++E ++ C+P+
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKE 332
TF + I L G D AYKV+++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEK 472
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D +Y +++ C G +KA +LL EM+ KG E T VTY +V++ L K +EA L+
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYC 283
E + K ++L+V Y+ I G R+ E +++E+ GL P+ ++N L+
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGF--GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K E ++EA ++ ++E C+PN T+ I LC F+KA+ ++E P
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ ++ GL K I EA + K
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFK 789
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 150/337 (44%), Gaps = 7/337 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A ++ S+ K A + ++ V RL KS++ + + E E C
Sbjct: 394 DTAFELRDSMQK--AGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+LI G+ G D A + +++M + + I + +L+ R D I D I +
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N SPD + +G +K + E++ + +Y+ +++ L K G A
Sbjct: 512 --NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E L+ M+++G LD AYN+ I G + +L++EM+ G +P ++Y ++
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K + +DEA ++E + N + + I G D+AY + +E +
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
P+ T L++ LVK ++I EA +++K+ K PN
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 143/326 (43%), Gaps = 4/326 (1%)
Query: 48 YSSVSKHYA-SPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
YS + + A + S A + + L K + + + E K D Y LI
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNI-LIDM 386
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
+AG D A D M + G +V + N ++ +S+ D+ +F+E+ K +P
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV-CTP 445
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D+I++ L+ G D A ++ +M + ++ YT+++ + G E+ +++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 227 SEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
+M + D+ N + + G+PE+ + + +E++ PD SY+ L+ K
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+E +++ ++E GC + + I C G +KAY++ +E P T
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTY 625
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK 371
+++GL K ++ EA + K K
Sbjct: 626 GSVIDGLAKIDRLDEAYMLFEEAKSK 651
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LAK R + L E K+ +LI +G+ G D A +++ + G +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+ ++N+LL A ++ ++ + F + K+ +P++++YG+L+ C +KA
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSM-KELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
EM+ +G++ +T++YTT+++ L K GN EA L+ + G D A YN I G
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 252 DPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ L +E R GL + L+ KN+ +++A V L E G + +A
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAA-- 868
Query: 311 RTW 313
R+W
Sbjct: 869 RSW 871
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 166/342 (48%), Gaps = 16/342 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVR-RLAKSKRFSDIETLIESHKNDPKITQEPYL 100
++A+ ++ + K SP Y L V ++ +S ++ I L++ +++ E
Sbjct: 226 ERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRS--WNKILGLLDEMRSNGLEFDEFTC 283
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I + G+ G+ D A + F ++ G ++N+LL ++ +Y + + E+ K
Sbjct: 284 STVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEK 343
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N PD ++Y L+ ++ +G ++ + ++ M KG+ +TYTTV+N K G +
Sbjct: 344 N-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKED 402
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNF 277
+A + +M++ G +V YN + G RL+E+ID +MR G P+++++N
Sbjct: 403 KALSFFRQMKESGCVPNVCTYNAILGML--GKKSRLEEMIDMLCDMRSNGCAPNSVTWN- 459
Query: 278 LMTCYCKNEMMDE-AKKVYEGLEENGCSPNATTFRTWI--YHLCGSGNFDKAYKVFKESV 334
M C N+ M + +V+ ++ G PN TF I Y CGS D K+++E +
Sbjct: 460 TMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGS-QID-VVKMYEEMI 517
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
P T L+ L ++ + A+ VI +K K F PN
Sbjct: 518 KAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPN 559
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 5/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R G+ A+R D++ V ++ +L A +R Y++ +F+++ +K
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKM-RKT 238
Query: 163 NLSPDKISYGLLLKSHCDSGSS-DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP ++Y ++L + G S +K L LL+EM + G+E T +TV++ ++G +E
Sbjct: 239 GLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDE 298
Query: 222 AERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + ++ ++ +G YN +++ G E L ++ EM PD ++YN L+
Sbjct: 299 ARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEAL-SILKEMEKNNCPPDLVTYNELV 357
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y + +E + + G PNA T+ T I +G DKA F++ +
Sbjct: 358 AAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCV 417
Query: 340 PDFNTVKLLVEGLVKKKKIKE 360
P+ T ++ L KK +++E
Sbjct: 418 PNVCTYNAILGMLGKKSRLEE 438
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 37/302 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +YG+ G ++ +++M + G V ++NALL A R ++ + ++ K
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSK- 554
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P++ SY L+L + G+ ++ E+ N + + + T++ +K+
Sbjct: 555 GFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGM 614
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT---------------------------NTY------ 249
ER + E K G D+ +N ++ TY
Sbjct: 615 ERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDM 674
Query: 250 ---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
GG+ + +E++ ++ +G KPD +SYN ++ +C+ +M EA + + +G P
Sbjct: 675 YARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPC 734
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ T++ G G F + +V + P+ T K++V+G K KK KEA +
Sbjct: 735 IVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVS 794
Query: 367 TI 368
I
Sbjct: 795 NI 796
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 177/434 (40%), Gaps = 89/434 (20%)
Query: 9 RLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLT 68
RL + AG+ T S + V K+ + SE AL I + K+ P Y + +
Sbjct: 305 RLKSEGYVAGTFTYNSLLQVF-GKAGIYSE-----ALSILKEMEKNNCPPDLVTYNELVA 358
Query: 69 --VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
VR + I+T+I IT +I +YG+AG D A+ F QM E
Sbjct: 359 AYVRAGFHEEGADFIDTMIRKGIMPNAIT----YTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 127 GTPRSVISFNALL-FACTRSRLYDKVPIL------------------------------- 154
G +V ++NA+L +SRL + + +L
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 155 ---FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
F E+ K P++ ++ L+ ++ GS +++ EM G TY +LN
Sbjct: 475 NRVFREM-KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLN 533
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDA--- 266
L ++G+ E AE + +M+ KG + +Y++ + N Y GG+ ++++ +E+ +
Sbjct: 534 ALARRGDWEAAESVILDMKSKGFKPNETSYSLML-NCYAKGGNGRGIEKIEEEIYNGHIF 592
Query: 267 --------------------------------GLKPDTISYNFLMTCYCKNEMMDEAKKV 294
G KPD + +N +++ + KN+M D A ++
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEM 652
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ E+G P+ T+ + + G K ++ K PD + +++G +
Sbjct: 653 LRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCR 712
Query: 355 KKKIKEAKGVIRTI 368
+ ++EA IRT+
Sbjct: 713 QGLMQEA---IRTL 723
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
R F + + G ++ FN++L ++++YD+ + I ++ L PD ++Y L+
Sbjct: 616 RAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI-RESGLQPDLVTYNSLMDM 674
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+ G K E+L ++ G + V+Y TV+ +QG +EA R SEM G+
Sbjct: 675 YARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPC 734
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+ YN + G G ++E+I M +P+ ++Y ++ YCK + EA
Sbjct: 735 IVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVS 794
Query: 297 GLEE 300
+ E
Sbjct: 795 NITE 798
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR-- 244
AL LL+E+ + + +TT+L+ + G E A ++ +M K G+ + YNV
Sbjct: 193 ALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLD 252
Query: 245 ITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ G ++ L+DEMR GL+ D + + +++ + ++DEA+K + L+ G
Sbjct: 253 VYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYV 312
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
T+ + + +G + +A + KE + PD T LV V+ +E
Sbjct: 313 AGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADF 372
Query: 365 IRT-IKKKFPPNVL 377
I T I+K PN +
Sbjct: 373 IDTMIRKGIMPNAI 386
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 137/326 (42%), Gaps = 75/326 (23%)
Query: 109 QAGMFDHAMRTFDQMDELGTP-RSVISFNALLFACTRSRLYDKVPILFDEIPKK------ 161
QAG D A R D+M+ L T V+++N L+ AC + R L +E+ K
Sbjct: 325 QAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTL 384
Query: 162 ----------------------------YNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
L+PD I+Y L+ ++C +G+ KA L++E
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444
Query: 194 MENKGVEVTT-----------------------------------VTYTTVLNCLYKQGN 218
M KG+++ T V+Y TV+ +K+ N
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISY 275
E A RLW +M ++ + ++ YN I ERLKE ID E+ + GL PD +Y
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRM--ERLKEAIDKLNELVEKGLVPDETTY 562
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ YCK ++ A + + + EN P+ T T + LC G DKA K+F+ V
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
K D T L++ + K + A
Sbjct: 623 KGKKVDVITYNTLIQSMCKVGDVDTA 648
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 3/286 (1%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
+ L+ K D +P L+ ++ + G A + + M G + ++N
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
L ++ D+ L DE+ + PD ++Y L+ + S AL LL EM +K
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPER 255
GV+ T VT+ V+ L K+G EEA ++ ++G+ DV YN I + Y G+ +
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLI-DAYCKAGNVAK 437
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L+DEM GLK DT + N ++ CK + ++A+++ + G P+ ++ T +
Sbjct: 438 AFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMA 497
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
N + A +++ + + IP +T L++GL + +++KEA
Sbjct: 498 AYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 47/302 (15%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
++ F + EL + +FN L+ C++ L D + L + + LSPD ++Y L
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATL--STMQGFGLSPDAVTYNTL 249
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC---------------------- 212
L +HC G +A LL M+ G+ T TY T+++
Sbjct: 250 LNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGF 309
Query: 213 -------------LYKQGNAEEAERLWSEMEKKGVDL-DVAAYNVRITNTY----GGDPE 254
L + G +EA RL EME+ L DV YN + + D
Sbjct: 310 EPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDAL 369
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
R L++EMRD G+KP +++N ++ CK ++EA E + E G +P+ T+ T I
Sbjct: 370 R---LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLI 426
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FP 373
C +GN KA+ + E V D T+ ++ L K K+ ++A+ ++ + ++ F
Sbjct: 427 DAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFV 486
Query: 374 PN 375
P+
Sbjct: 487 PD 488
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 127/268 (47%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y +AG A D+M G + N +L+ + + Y+ L P++
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR- 483
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD++SYG ++ ++ + + AL L ++M + + + TY T++ L + +EA
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+E+ +KG+ D YN+ I + Y GD E ++M + KPD ++ N LM
Sbjct: 544 IDKLNELVEKGLVPDETTYNI-IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMN 602
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C + +D+A K++E E G + T+ T I +C G+ D A F + + P
Sbjct: 603 GLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQP 662
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D T +++ L + + +EA ++ +
Sbjct: 663 DAFTYNVVLSALSEAGRSEEAHNMLHKL 690
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 40/324 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K KR+ D E L+ S + E ++ +Y + + A+R +DQM E S
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++N L+ C RL + + L + + K L PD+ +Y +++ ++C G + A
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEK--GLVPDETTYNIIIHAYCKEGDLENAFRF 581
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
N+M + VT T++N L G ++A +L+ +KG +DV YN I +
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG------- 302
GD + D+M GL+PD +YN +++ + +EA + L ++G
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701
Query: 303 CS------------------PNA-----------TTFRTWIYHLCGSGNFDKAYKVFKES 333
C P A T+ + LC G +A V E
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKK 357
+ D +T L+EGL+K++K
Sbjct: 762 MQKGMPVDSSTYITLMEGLIKRQK 785
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 222 AERLWSEMEKKGVDLDVAAYNV---RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A+ L S ++GV + A N ++ + P+ ++ + + L P+ ++N L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
+ +C + +A ++ G SP+A T+ T + C G +A + K +
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
P +NT LV + IK+A V+ ++
Sbjct: 275 APTQPTYNT---LVSAFARLGWIKQATKVVESM 304
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 6/340 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A ++Y + P Y+ + + L K RF +++ +
Sbjct: 331 RATELYEMMGSKGCPPDVHTYS--ILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYST 388
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S+ + GM+D A DQM G + +N +++A + D+ L E+ K
Sbjct: 389 LLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM-KSQ 447
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y ++ C++ ++A + + +GV +TY T+++ L + G +E
Sbjct: 448 GCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEG 507
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL SEM G LDV +YN I G+ +R L++EM G+KP+ SYN L+
Sbjct: 508 LRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINE 567
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +A ++ + + G +P+ T+ T I LC G A + ++ + PD
Sbjct: 568 LCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPD 627
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAW 380
T +L+ K + + +A ++ + I PN R W
Sbjct: 628 IVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNE-RTW 666
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 32/306 (10%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK- 160
+L+ G A R D+M G SV+++ LL R+R D+ + +P+
Sbjct: 252 DLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV 311
Query: 161 -----------------------------KYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
PD +Y +L+ C G A+ +L
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYG 250
+EME KG VTY+T+L+ + G ++A + +M KG ++ YN I
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKD 431
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G ++ L+ EM+ G KPD +YN ++ C N++M+EA+ ++ L E G N T+
Sbjct: 432 GKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITY 491
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIK 369
T I+ L +G + + ++ E ++ D + L++ L K+ + + ++ +
Sbjct: 492 NTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVT 551
Query: 370 KKFPPN 375
K PN
Sbjct: 552 KGIKPN 557
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 138/327 (42%), Gaps = 10/327 (3%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL +Y + + P + + + R L + R D L+ + +
Sbjct: 161 ALLLYRRMLRDRVPPTTFTFG--VAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTV 218
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKY 162
I + G A D+M +G V +FN L+ C R+ + L D + +
Sbjct: 219 IHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAAR-LVDRMMTQ- 276
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++YG LL+ C + +D+A +L + EV V TV+ +G A
Sbjct: 277 GCMPSVVTYGFLLQGLCRTRQADEACAMLGRLP----EVNVVMLNTVIRGCLTEGKLARA 332
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ M KG DV Y++ + G ++DEM + G P+ ++Y+ L+
Sbjct: 333 TELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHS 392
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+C+N M D+A+ + + + G S N+ + IY LC G D+A ++ +E PD
Sbjct: 393 FCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPD 452
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T ++ L ++EA+ + R +
Sbjct: 453 ICTYNTMIYHLCNNDLMEEAEHIFRNL 479
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 103/290 (35%), Gaps = 68/290 (23%)
Query: 154 LFDEIPKKYNLSPDKISYGLLL-----------------------------------KSH 178
L D++P+++ +SP SY ++L ++
Sbjct: 128 LLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARAL 187
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G + AL LL M G V Y TV++ L QG EA L EM G DV
Sbjct: 188 CRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADV 247
Query: 239 AAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE------- 290
+N + G G L+D M G P ++Y FL+ C+ DE
Sbjct: 248 NTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGR 307
Query: 291 ------------------------AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
A ++YE + GC P+ T+ ++ LC G F A
Sbjct: 308 LPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSA 367
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
++ E P+ T L+ + +A+ ++ + + K F N
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMN 417
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 37/280 (13%)
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M E G V++FN L+ R + L D + + + P++++YG ++ C G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGH-QPNEVTYGTIVNGMCKMG 59
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+D AL LL +M+ ++ V YT +++ L K G+ +A+ L++EM KG+ +V YN
Sbjct: 60 DTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYN 119
Query: 243 VRITN--TYG--GDPERL--------------------------------KELIDEMRDA 266
I +YG D E+L +EL EM
Sbjct: 120 CMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGR 179
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ PDTI+YN L+ +CK+ +D+AK +++ + G SPN T T I C + D
Sbjct: 180 NIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDG 239
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
K+ E + +PD + L+ G + + A+ + +
Sbjct: 240 IKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQ 279
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M + G + D +++N LM C+ + EA+ + + + ENG PN T+ T + +C G+
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D A + ++ H D +++ L K +A+ + + K PNVL
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVL 116
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI ++ + G A + +M I++N+L+ C SRL D +FD + K
Sbjct: 156 LINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRL-DDAKHIFDLMVSK 214
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ I+ L+ C + D ++LL+EM +G+ +V+Y T+++ + G+
Sbjct: 215 GG-SPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNA 273
Query: 222 AERLWSEM 229
A+ L+ EM
Sbjct: 274 AQDLFQEM 281
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK-- 160
LI G A+ D+M E G ++++N+++ RS + FD + K
Sbjct: 164 LINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRS---GDTSLAFDMLRKME 220
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ N+ D +Y ++ S C G D A+ L EME KG++ + VTY +++ L K G
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ L +M + + +V +NV + G + EL EM G+ P+ I+YN LM
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC + EA + + + N CSP+ TF + I C D KVF+ +
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ T +LV+G + KIK A+ + + + P+V+
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 152/345 (44%), Gaps = 9/345 (2%)
Query: 32 KSKLRS---EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
+ +LRS + D A+ ++ + + P +++ + +A++K+F+ + +
Sbjct: 57 RERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSA--IARTKQFNLVLDFCKQL 114
Query: 89 KNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
+ + I Y N +I + + A ++ +LG +FN L+
Sbjct: 115 ELNG-IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGK 173
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
K +L D + + PD ++Y ++ C SG + A ++L +ME + V+ TY+
Sbjct: 174 VSKAVVLVDRMVEN-GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYS 232
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDA 266
T+++ L + G + A L+ EME KG+ V YN + G L+ +M
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ P+ I++N L+ + K + EA ++Y+ + G SPN T+ T + C +A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ V PD T L++G K++ + V R I K+
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR 397
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 9/258 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
RL+++ D L+ +K P I +LI+ Y D M+ F + + G
Sbjct: 348 RLSEANNMLD---LMVRNKCSPDIVT---FTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++++ L+ +S LF E+ + + PD ++YG+LL CD+G +KALE+
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
+++ +++ V YTT++ + K G E+A L+ + KGV +V Y V I+
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G L+ +M + G P+ +YN L+ + ++ + + K+ E ++ G S +A++
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 310 FRTWIYHLCGSGNFDKAY 327
+ I L SG DK++
Sbjct: 581 IKMVIDMLL-SGELDKSF 597
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Y A D M +++F +L+ C R+ D + + F I K+
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV-FRNISKR 397
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L + ++Y +L++ C SG A EL EM + GV +TY +L+ L G E+
Sbjct: 398 -GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +++K +DL + Y I GG E L + G+KP+ ++Y +++
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA + +EE+G +PN T+ T I G+ + K+ +E
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 341 DFNTVKLLVEGLV 353
D +++K++++ L+
Sbjct: 577 DASSIKMVIDMLL 589
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 123/269 (45%), Gaps = 4/269 (1%)
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
SS + VR L K+ +++D L++ + + L+ + + G A
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+ +M G ++I++N L+ C ++RL + +L ++ + SPD +++ L+K +
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML--DLMVRNKCSPDIVTFTSLIKGY 378
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C D +++ + +G+ VTY+ ++ + G + AE L+ EM GV DV
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 239 AAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y + + G E+ E+ ++++ + + + Y ++ CK +++A ++
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKA 326
L G PN T+ I LC G+ +A
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 135/266 (50%), Gaps = 12/266 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y + G + A+R + ++ + S+++FN+L++ ++R + L + I K +
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESI-KLH 495
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P ++Y L+ ++C+ G+ +K ELL EM K +E T VTYT V+ L KQ EE+
Sbjct: 496 GLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEES 555
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M KG+ D YN I D + EL+D+M L+P +YN L+
Sbjct: 556 VQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDG 615
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--- 338
C+ +++A +V L++ + + T I C G+ +A KVF + MV K
Sbjct: 616 LCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQ--MVEKGFE 673
Query: 339 --IPDFNTVKLLVEGLVKKKKIKEAK 362
I D++ V + L K+ I EAK
Sbjct: 674 VSIKDYSAV---INRLCKRCLINEAK 696
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 138/271 (50%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + Q G + A+R + G +VI ++ LL + C R ++ + + +L++ +
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYE--MEA 354
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL PD ++Y +L+ C G +A++L EM + + ++ +L L ++G +
Sbjct: 355 NNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSD 414
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + + + DV YN+ I GD E L +RD + P +++N L+
Sbjct: 415 ARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIY 474
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CKN + EA+++ E ++ +G P+A T+ T + C GN +K +++ E + P
Sbjct: 475 GFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEP 534
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T ++++GL K++K++E+ ++ ++ K
Sbjct: 535 TVVTYTVVIKGLCKQRKLEESVQLLEDMRAK 565
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 123/246 (50%), Gaps = 5/246 (2%)
Query: 119 TFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
++ + + GTP+S + + ++ C +SR D V L K++ +P +S+ ++
Sbjct: 137 VYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEF--APSVVSFNTIMSR 194
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+C G +D A M G+ T +Y +++ L G+ EEA L ++MEK+G+ D
Sbjct: 195 YCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPD 254
Query: 238 VAAYNVRITNTY-GGDPERLKELIDEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ Y + + G +E+I +M D GLKPD ++Y L+ +C+ ++EA ++
Sbjct: 255 MVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLR 314
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
L +G N + + LC G D+A ++ E + PD T +L+ GL K+
Sbjct: 315 RDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQ 374
Query: 356 KKIKEA 361
K+++A
Sbjct: 375 GKVQQA 380
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 126/278 (45%), Gaps = 38/278 (13%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
SV+SFN ++ + L D F + K Y + PD SY +L+ +GS ++ALEL
Sbjct: 184 SVVSFNTIMSRYCKLGLADVAKSFFCMMLK-YGILPDTYSYNILIHGLIVAGSMEEALEL 242
Query: 191 LNEMENKGVEVTTVTYT-----------------------------------TVLNCLYK 215
N+ME +G++ VTY TVL C +
Sbjct: 243 TNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHC 302
Query: 216 Q-GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTI 273
Q GN EEA RL ++ G L+V Y+V +++ G + +L+ EM L+PD +
Sbjct: 303 QMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV 362
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y+ L+ CK + +A ++Y+ + N PN+ + LC G A F
Sbjct: 363 TYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+M + PD ++++G VK ++EA + + ++ K
Sbjct: 423 IMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDK 460
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI AG + A+ + M++ G ++++ + L + ++
Sbjct: 226 LIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDE 285
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD ++Y +L+ HC G+ ++AL L ++ + G ++ + Y+ +L+ L K+G +EA
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L EME + D+ Y++ I G ++ +L EM + P++ +++ ++
Sbjct: 346 LQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKG 405
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA---YKVFKESVMVHK 338
C+ M+ +A+ ++ L + P+ T + I G+ ++A YK ++ +
Sbjct: 406 LCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPS 465
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
I FN+ L+ G K +K+ EA+ ++ +IK
Sbjct: 466 IVTFNS---LIYGFCKNRKVVEARRLLESIK 493
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 116/233 (49%), Gaps = 7/233 (3%)
Query: 142 CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV 201
C + L D + FD + NL PD Y +++ + G ++A+ L + +K +
Sbjct: 407 CEKGMLSD-ARMYFDSLIMS-NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITP 464
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKEL 259
+ VT+ +++ K EA RL ++ G++ Y + N Y G+ +L EL
Sbjct: 465 SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTT-LMNAYCEEGNINKLHEL 523
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+ EM ++P ++Y ++ CK ++E+ ++ E + G +P+ T+ T I C
Sbjct: 524 LLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCK 583
Query: 320 SGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ + KA+++ + +++H + P T +L++GL + +++A V+ +++ +
Sbjct: 584 AKDMRKAFELL-DDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 143/302 (47%), Gaps = 14/302 (4%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQ 96
D ++A+ +Y + +P S + + K+++ + L+ES H +P
Sbjct: 446 DVEEAVRLYKRLRDKAITP--SIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
L N +Y + G + +M+ +V+++ ++ C + +L + V +L
Sbjct: 504 YTTLMN---AYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLE 560
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D K L+PD+I+Y +++ C + KA ELL++M +E T TY +++ L +
Sbjct: 561 DMRAK--GLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCR 618
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTIS 274
G+ E+A+R+ ++ + ++L AY I + GD +R ++ +M + G +
Sbjct: 619 YGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKD 678
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y+ ++ CK +++EAK + + +G SP+ F + +G+ +++ +V
Sbjct: 679 YSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL--AV 736
Query: 335 MV 336
M+
Sbjct: 737 MI 738
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N++ K++Y ++K+HC G + +A+++ ++M KG EV+ Y+ V+N L K+ EA
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ + M GV D + + + + G + EL+ M GL D
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 153/355 (43%), Gaps = 55/355 (15%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGM-----------------FD 114
LA SKR+S + + ++S + K T +L+ G+ G
Sbjct: 88 LANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELH 147
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK------------- 161
A F + + G S+ S N LL A + V ++ E+ K+
Sbjct: 148 CAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFI 207
Query: 162 ---------------------YNLSPDKISYGLLLKSHCDSGSSDK---ALELLNEMENK 197
+ +SP+ ++Y L+ +C GS+ K A + EM
Sbjct: 208 NGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLAN 267
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERL 256
+ VT+ T+++ K N A++ + EM+K+G+ ++ YN I G E
Sbjct: 268 KICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEA 327
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
+L D+M GLKP+ ++YN L+ +CK +MM EA KV++ + + PN TF T I
Sbjct: 328 IDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDA 387
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
C G ++ + + + +P+ +T L+ GL +K+ ++ AK ++ ++ K
Sbjct: 388 YCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 116/231 (50%), Gaps = 2/231 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G + A+ +D+M LG +++++NAL+ + ++ + +FD++ K+
Sbjct: 314 LINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ- 372
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ I++ ++ ++C G ++ L + M ++G+ TY ++ L ++ + + A
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAA 432
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTC 281
+ L +EME KG+ DV YN+ I D R E L++EM + GLKP+ ++YN LM
Sbjct: 433 KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
YC + A V +E+ PN T+ I C + A + E
Sbjct: 493 YCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNE 543
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 131/263 (49%), Gaps = 5/263 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A + F++M + G +++++N+L+ C +L + + L+D++ L P+ ++Y L
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID-LWDKMVG-LGLKPNIVTYNAL 349
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
+ C +A ++ +++ + + +T+ T+++ K+G EE L S M +G+
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+V+ YN I D + KEL++EM + GLK D ++YN L+ CKN+ A+K
Sbjct: 410 LPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEK 469
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ + G PN T+ T + C G A V K P+ T +L++G
Sbjct: 470 LLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYC 529
Query: 354 KKKKIKEAKGVIR-TIKKKFPPN 375
K K++ A G++ ++K PN
Sbjct: 530 KINKLEAANGLLNEMLEKGLNPN 552
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 19/325 (5%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K KR ++ L+E D + + N + + G D A+ + +E
Sbjct: 284 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 343
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++A++ + R DK + +E+ K PD ++Y ++ C D+A ++
Sbjct: 344 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSK-GCIPDVVTYTSVINGLCQERKVDQAKKM 402
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
L +M G + TV+YT +LN L K GN+ EA + + E+ + Y+V +
Sbjct: 403 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRR 462
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G +L+ EM G P + N L+ C+ E +DEAK+ E NGC+ N
Sbjct: 463 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 522
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
F T I+ C + + A + + + +K PD T +++ L KK +I+EA
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA-------- 574
Query: 370 KKFPPNVLRAWKKVEEELGLVPAPA 394
K +LR +GL+P P
Sbjct: 575 TKLAMKMLR--------VGLIPTPV 591
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 13/310 (4%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTP 129
R K + + T+++ +P ++ +CN I D A+R ++M +
Sbjct: 181 RAGKLRNAMRVLTMMQKAGIEPDLS----ICNTAIHVLVMGNRLDKAVRFLERMQIVEIE 236
Query: 130 RSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+VI++N L+ C RL D + L E+P K SPDKISY ++ C +
Sbjct: 237 PNVITYNCLIKGYCDLHRLEDAME-LIAEMPFK-GCSPDKISYYTVMGFLCKEKRIKEVR 294
Query: 189 ELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L+ +M ++ + VTY T ++ L K G+ +EA E E++ +D Y+ I +
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA-IVH 353
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
++ G ++ KE+++EM G PD ++Y ++ C+ +D+AKK+ + ++GC P
Sbjct: 354 SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKP 413
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N ++ + LC +GN +A ++ S IP+ T +L+ G ++ K EA ++
Sbjct: 414 NTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLV 473
Query: 366 R-TIKKKFPP 374
R IKK F P
Sbjct: 474 REMIKKGFFP 483
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 70/322 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ S+ + G D A ++M G V+++ +++ + R D+ + ++ K+
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM-YKH 409
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY LL C +G+S +A E++N E +TY+ +++ ++G + EA
Sbjct: 410 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 469
Query: 223 ERLWSEMEKKG-----VDLDV--------------------------AAYNVRITNTYGG 251
L EM KKG V++++ A V T G
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529
Query: 252 -----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
D E L+D+M + PD ++Y ++ K ++EA K+ + G P
Sbjct: 530 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 589
Query: 307 ATTFRTWIYH---------------------------------LCGSGNFDKAYKVFKES 333
T+RT I+ LC GN ++AYK+ +
Sbjct: 590 PVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKV 649
Query: 334 VMVHKIPDFNTVKLLVEGLVKK 355
+ D NT +L+E + K
Sbjct: 650 LRTASKIDANTCHMLIESYLSK 671
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++ D I Y +L+ + A +L M + +E + V+ + G
Sbjct: 126 RQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKL 185
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A R+ + M+K G++ D++ N I G ++ ++ M+ ++P+ I+YN L
Sbjct: 186 RNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCL 245
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM--V 336
+ YC +++A ++ + GCSP+ ++ T + LC K ++ E ++
Sbjct: 246 IKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI-KEVRLLMEKMLKDS 304
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ +PD T V L K EA +R +++
Sbjct: 305 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 339
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
S A + V L KS R D L++ +L+ Y +
Sbjct: 176 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 235
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+ M+ G +V ++ L+ + + +R KV LF+E+ K N+ D Y ++ ++C
Sbjct: 236 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEM-KANNVVGDVYLYTAVINAYCR 294
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+G+ +A ++L+E GVE TY ++N K G E AE L ++M+ +GV L+
Sbjct: 295 AGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQII 354
Query: 241 YNVRITN----TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+N I D ++K +++M G++ D +YN L C+ +DEAK +
Sbjct: 355 FNTMIDGYCRKGMVDDALKIKAAMEKM---GVELDIYTYNTLACGLCRVNRLDEAKTLLH 411
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ E G PN T+ T I C G+ +A ++F+E P T ++++G KK
Sbjct: 412 IMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKG 471
Query: 357 KIKEAKGVIRTIKKK-FPPNV 376
I+EA+ + ++KK F P+V
Sbjct: 472 SIREAERFRKEMEKKGFVPDV 492
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 142/329 (43%), Gaps = 13/329 (3%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL 84
S+S ++ SK+ + F+ KA ++ V + A V + Y + +RR AK L
Sbjct: 256 SLSTARDISKVEALFNEMKANNVVGDVYLYTA--VINAYCRAGNMRRAAK--------VL 305
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR 144
E N + + Y LI + + G + A M G + I FN ++ R
Sbjct: 306 DECVGNGVEPNERTYGV-LINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCR 364
Query: 145 SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
+ D + +K + D +Y L C D+A LL+ M GV V
Sbjct: 365 KGMVDDA-LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYV 423
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM 263
TYTT+++ K G+ EA RL+ EM +KG V YNV I T G + EM
Sbjct: 424 TYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEM 483
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
G PD +Y L+ +C N +D A K++E +++ G PN + I L G
Sbjct: 484 EKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRS 543
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ A++++ + + IPD + LV L
Sbjct: 544 EAAFQLYDDMLKAGLIPDDSLYSALVGSL 572
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 13/265 (4%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F++M V + A++ A R+ + + DE + P++ +YG+L+ C
Sbjct: 270 FNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGN-GVEPNERTYGVLINGFC 328
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G + A LL +M+ +GV + + + T+++ ++G ++A ++ + MEK GV+LD+
Sbjct: 329 KIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIY 388
Query: 240 AYNV------RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
YN R+ + K L+ M + G+ P+ ++Y L++ +CK+ M EA++
Sbjct: 389 TYNTLACGLCRVNRL-----DEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARR 443
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + E G +P+ T+ I G+ +A + KE +PD T LV G
Sbjct: 444 LFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHC 503
Query: 354 KKKKIKEAKGVIRTIKKK-FPPNVL 377
K+ A + +K++ PNV+
Sbjct: 504 VNGKVDVALKLFEEMKQRGTEPNVV 528
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 133/296 (44%), Gaps = 2/296 (0%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ V L+ ++ S +E L K + + +I +Y +AG A + D+
Sbjct: 252 ILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGN 311
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G + ++ L+ + + +L ++ + + ++I + ++ +C G D
Sbjct: 312 GVEPNERTYGVLINGFCKIGQMEAAEMLLADM-QGQGVGLNQIIFNTMIDGYCRKGMVDD 370
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL++ ME GVE+ TY T+ L + +EA+ L M + GV + Y I+
Sbjct: 371 ALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLIS 430
Query: 247 -NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ GD + L EM + G P ++YN ++ Y K + EA++ + +E+ G P
Sbjct: 431 IHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVP 490
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ T+ + ++ C +G D A K+F+E P+ L+ GL K+ + + A
Sbjct: 491 DVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAA 546
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++SP ++ +++ C SG D A LL++M GV + + Y ++L+C +Q +
Sbjct: 174 SVSP--LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRV 231
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + ME +G++ V Y + + + + D +++ L +EM+ + D Y ++
Sbjct: 232 QEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINA 291
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK----ESVMVH 337
YC+ M A KV + NG PN T+ I C G + A + + V ++
Sbjct: 292 YCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLN 351
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEA 361
+I FNT +++G +K + +A
Sbjct: 352 QII-FNT---MIDGYCRKGMVDDA 371
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L + R + +TL+ + LI + + G A R F +M E G S
Sbjct: 397 LCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPS 456
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++N ++ T+ + E+ KK PD +Y L+ HC +G D AL+L
Sbjct: 457 VVTYNVMIDGYTKKGSIREAERFRKEMEKK-GFVPDVYTYASLVHGHCVNGKVDVALKLF 515
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
EM+ +G E V YT +++ L K+G +E A +L+ +M K G+ D + Y+ + + +
Sbjct: 516 EEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLH 573
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 163/371 (43%), Gaps = 11/371 (2%)
Query: 18 GSSTT---ASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPV-SSRYAQDLTVRRLA 73
GS T + I ++ +++E D KA+ I+ S + Y + S L + RL
Sbjct: 2 GSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLV 61
Query: 74 KSKRFSDIETLIESHKNDP-KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSV 132
+ F E L+ K + IT++ +L ++ R+YG+ A+R F +M E S
Sbjct: 62 SANHFRLAEELLCRMKEEKCNITEDIFL-SICRAYGRVHKPLDAVRVFRKMKEYECEPSQ 120
Query: 133 ISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC-DSGSSDKALELL 191
S+ +FA K+ + F ++ + P S +L+K+ C +SG+ D AL +
Sbjct: 121 KSY-ITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIF 179
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
EM N+G + TY T++ L + G EA+ L+ EME K V Y I
Sbjct: 180 REMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQS 239
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
D + L++EM G+KP+ +Y+ LM +CK+ A ++ + + PN T+
Sbjct: 240 KDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITY 299
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIK 369
T ++ LC G +A ++ + PD ++ G K EA + +
Sbjct: 300 STLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVL 359
Query: 370 KKFPPNVLRAW 380
PN L W
Sbjct: 360 GGISPNRL-TW 369
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 14/275 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A F +M+ +V+++ +L+ +S+ D L +E+ K
Sbjct: 197 LIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASK- 255
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y L+ HC SG S +ALELL+ M ++ +TY+T+++ L K+G +EA
Sbjct: 256 GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISY---- 275
+ M+ +G+ D Y I+ D + E +DEM G+ P+ +++
Sbjct: 316 VEILDRMKLQGLRPDAGLYGKIISGF--CDICKFHEAANFLDEMVLGGISPNRLTWSLHV 373
Query: 276 ---NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
N ++ C E + A ++Y + G S +A TF + + + C G+ KA + E
Sbjct: 374 RIHNIVVQGLC-TEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDE 432
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
V+ IPD T +V ++K++E+ +++
Sbjct: 433 MVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQV 467
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 161/359 (44%), Gaps = 8/359 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +I+ S+ + +P Y + A D+ L+ D ++
Sbjct: 243 EARNIFDSMVRRGQNP--DAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNI 300
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LIR+Y + D AM F +M + G +V+++ ++ C R+ D V + +
Sbjct: 301 LIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSE- 359
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSPD I++ L+ C G K +L EM N+G+ + T+++ L K+G E
Sbjct: 360 -GLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + ++ GV DV +Y + I G + +L+ M GL+PD ++Y+ L+
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCKN +D+A +Y + PNA T+ ++ L +G A + + + V
Sbjct: 479 GYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEELGLVPAPAVGDGQ 399
NT +++ GL + + EA + + ++ K +R + + +GL+ +GD +
Sbjct: 539 GINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIM--IVGLLKVGRIGDAK 595
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 31/304 (10%)
Query: 103 LIRSYGQAGMFDHAM-------RTFDQM---DELGTPRSVISFNALLFACTRSRLYDKVP 152
LIR + G+ D A+ R M D P +V+S+N ++ + DK
Sbjct: 100 LIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAY 159
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHC----------------DSGSSDKALELLNEMEN 196
LF E+ + P+ ++Y ++ C D G ++A+ LL +M
Sbjct: 160 TLFHEMLGQ-GFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSG 218
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPE 254
G++ VTY+ +++ K G EA ++ M ++G + D Y + + Y G
Sbjct: 219 GGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRT-LLHGYATKGALV 277
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ +L+ M G+ + +N L+ Y KNE +D+A + + + G SPN T+ T I
Sbjct: 278 DMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVI 337
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFP 373
LC +G + A F + V PD T L+ GL + K+ + + I +
Sbjct: 338 DILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIH 397
Query: 374 PNVL 377
PN +
Sbjct: 398 PNAI 401
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 115/265 (43%), Gaps = 39/265 (14%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+L ++ S + G A FDQ+ +G V+S+ L+ C ++ + + +L
Sbjct: 402 FLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRM 461
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ L PD ++Y LL +C +G D AL L EM +K V+ +TY +L+ L+ G
Sbjct: 462 V--SIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAG 519
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRIT----NTYGGDPERL----------------- 256
A + ++ G+ L + YN+ + N++ + R+
Sbjct: 520 RVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFN 579
Query: 257 ---------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
K L + +GL PD I Y ++ + + +++E+ +++ +E+N
Sbjct: 580 IMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKN 639
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKA 326
GC+ N+ T + L G+ +A
Sbjct: 640 GCTANSRTLNAIVRKLLEKGDVRRA 664
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 18/276 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A F +M G P +++++N+++ +++ DK + ++ K
Sbjct: 145 VINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204
Query: 163 NL---------------SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
L PD ++Y LL+ +C G +A + + M +G TY
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKEL--IDEMRD 265
T+L+ +G + L + M + G+ L+ +N+ I Y + K + EMR
Sbjct: 265 TLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILI-RAYAKNETLDKAMTAFIEMRQ 323
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G P+ ++Y ++ CK +++A + + G SP+ TF + I+ LC G + K
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKK 383
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
K+ E + P+ + +++ L K+ ++ EA
Sbjct: 384 VEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEA 419
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 137/309 (44%), Gaps = 42/309 (13%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS------RLYDKVPI-LFDEIPK 160
G G+ D A+ FD++ SV +FN +L R + + LF+ + +
Sbjct: 26 GSLGLED-ALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVSLFNTMAQ 84
Query: 161 K--YNLSPDKISYGLLLKSHCDSGSSDKALE--------LLNEMENKGVEV--TTVTYTT 208
L+ D ++G+L++ C+ G D ALE ++ M + G ++Y
Sbjct: 85 VGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNM 144
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-----------------GG 251
V+N L+K+G ++A L+ EM +G ++ YN I G
Sbjct: 145 VINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKG 204
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E L+ +M GL+PD ++Y+ L+ YCK EA+ +++ + G +P+A T+R
Sbjct: 205 QLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHK-IP-DFNTVKLLVEGLVKKKKIKEA-KGVIRTI 368
T ++ G + + ++M+ IP + + +L+ K + + +A I
Sbjct: 265 TLLHGYATKGALVDMHDLL--ALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMR 322
Query: 369 KKKFPPNVL 377
+K F PNV+
Sbjct: 323 QKGFSPNVV 331
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A+R F + V +FN ++ + R+ D + +P L PD I YG
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPS--GLVPDAIIYG 614
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+++SH + G +++ EL ME G + T ++ L ++G+ A +++++K
Sbjct: 615 LMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G+ A + +QM+ G + ++ N L + + V E+ +
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD ++Y L+K++ G ALE++ EM KG+++ T+T T+L+ L K+ +EA
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
L + K+G +D Y I + + E+ E+ DEM+ + P ++N L+
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + + A + ++ L E+G P+ +TF + I C G +KA++ + ES+ PD
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T +L+ GL K+ ++A T+
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 5/281 (1%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
+T L L+R Y + A FD M ++G +V +FN L+ C +L D +
Sbjct: 167 LTCNTLLIGLVR-YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALG 225
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+L + + ++ ++PD ++Y +LK+ G ELL +M+ G+ VTY ++
Sbjct: 226 ML-ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
K G+ +EA ++ M++ V D+ YN+ I G EL+D M+ L+PD
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L+ + + EA+K+ E +E +G N T + LC + + K
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 332 ESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
E V +H PD T L++ +K + A ++R + +K
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 7/314 (2%)
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
VS+ +P + Y + ++ ++K R SD++ L+ K + + NL+ Y +
Sbjct: 231 VSEFKVNPDNVTY--NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKL 288
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G A + + M + + ++N L+ C + + + ++ + K L PD +
Sbjct: 289 GSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELM--DAMKSLKLQPDVV 346
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+Y L+ + G S +A +L+ +MEN GV+ VT+ L L K+ E R E+
Sbjct: 347 TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Query: 230 -EKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+ G D+ Y+ I GD E++ EM G+K +TI+ N ++ CK
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+DEA + + G + T+ T I +KA +++ E V P +T
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 348 LVEGLVKKKKIKEA 361
L+ GL K + A
Sbjct: 527 LIGGLCHHGKTELA 540
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 134/281 (47%), Gaps = 12/281 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++++ + G M + G + +++N L++ C L + I+ E+ K+
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV--ELMKQ 303
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ PD +Y +L+ C++GS + LEL++ M++ ++ VTY T+++ ++ G + E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-----TNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
A +L +ME GV + +N+ + ++KEL+D G PD ++Y+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDM---HGFSPDIVTYH 420
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ Y K + A ++ + + G N T T + LC D+A+ + +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
I D T L+ G +++K+++A + +KK K P V
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
++ L++ H P I LI++Y + G A+ +M + G + I+ N +L
Sbjct: 403 VKELVDMHGFSPDIVTYH---TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
A + R D+ L + K+ D+++YG L+ +KALE+ +EM+ +
Sbjct: 460 ALCKERKLDEAHNLLNSAHKR-GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKIT 518
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
T T+ +++ L G E A + E+ + G+ D + +N I G E+ E
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 260 IDEMRDAGLKPD----------------------------------TISYNFLMTCYCKN 285
+E KPD T++YN +++ +CK+
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKD 638
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ + EA + +EE G P+ T+ ++I L G + ++ K+
Sbjct: 639 KKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/242 (17%), Positives = 98/242 (40%), Gaps = 49/242 (20%)
Query: 183 SSDKALELLNEMENKGVEVT----TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
+SD +L L N + + + ++ + L+ +G A +++ +M + + ++
Sbjct: 107 TSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNL 166
Query: 239 AAYN------VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA- 291
N VR +++ R E+ D+M G+ + ++N L+ YC +++A
Sbjct: 167 LTCNTLLIGLVRYPSSFSISSAR--EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDAL 224
Query: 292 -----------------------------------KKVYEGLEENGCSPNATTFRTWIYH 316
K++ +++NG PN T+ +Y
Sbjct: 225 GMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG 284
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
C G+ +A+++ + + +PD T +L+ GL ++E ++ +K K P+
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPD 344
Query: 376 VL 377
V+
Sbjct: 345 VV 346
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 35/165 (21%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G + AM FD++ E G +FN+++ + +K ++E K
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE-SIK 584
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKAL--------------------------------- 188
++ PD + +LL C G ++KAL
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEA 644
Query: 189 -ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+LL+EME KG+E TY + ++ L + G E + L + K
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 138/309 (44%), Gaps = 12/309 (3%)
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
+R D+ IE + + T+ P+ SY + R FD +D++ SV F
Sbjct: 73 RRLKDVNRAIEYFRWYERRTELPHC---PESYNSLLLVMARCRNFDALDQILGEMSVAGF 129
Query: 136 NALLFACTRSRL----YDKVPILFDEIP--KKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ C L +K+ FD + +K+ P +Y L+ + SD L
Sbjct: 130 GPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
L +M+ G E T +TT++ K+G + A L EM+ +D D+ YNV I +++
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI-DSF 248
Query: 250 G--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G G + + E+ GLKPD ++Y ++ CK +DEA +++E LE+N P
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ T I +G FD+AY + + IP ++ L K K+ EA V
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE 368
Query: 368 IKKKFPPNV 376
+KK PN+
Sbjct: 369 MKKDAAPNL 377
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 134/266 (50%), Gaps = 5/266 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELG 127
+R AK R +L++ K+ + + L N+ I S+G+ G D A + F +++ G
Sbjct: 210 IRGFAKEGRVDSALSLLDEMKSSS-LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+++ +++ ++ D+ +F+ + K + P +Y ++ + +G D+A
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEA 327
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
LL KG + + Y +L CL K G +EA R++ EM+K +++ YN+ I
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAP-NLSTYNILIDM 386
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + EL D M+ AGL P+ + N ++ CK++ +DEA ++E ++ C+P+
Sbjct: 387 LCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPD 446
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKE 332
TF + I L G D AYK++++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEK 472
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 5/206 (2%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D +Y +++ C G +KA +LL EM+ KG E T VTY +V++ L K +EA L+
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYC 283
E + K ++L+V Y+ I G R+ E +++E+ GL P+ ++N L+
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGF--GKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALV 703
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K E ++EA ++ ++E C+PN T+ I LC F+KA+ ++E P
Sbjct: 704 KAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTI 763
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ ++ GL K I EA + K
Sbjct: 764 SYTTMISGLAKAGNIAEAGALFDRFK 789
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 143/314 (45%), Gaps = 7/314 (2%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
++ V RL KS++ + + E E C+LI G+ G D A + +++M +
Sbjct: 416 NIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLD 475
Query: 126 LGTPRSVISFNALL--FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
+ I + +L+ F R D I D + + N SPD + +G
Sbjct: 476 SDCRTNSIVYTSLIKNFF-NHGRKEDGHKIYKDMVNQ--NCSPDLQLLNTYMDCMFKAGE 532
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
+K + E++++ +Y+ +++ L K G A E L+ M+++G LD AYN+
Sbjct: 533 PEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 244 RITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I G + +L++EM+ G +P ++Y ++ K + +DEA ++E +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
N + + I G D+AY + +E + P+ T L++ LVK ++I EA
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEAL 712
Query: 363 GVIRTIKK-KFPPN 375
+++K+ K PN
Sbjct: 713 VCFQSMKELKCTPN 726
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG D A D M + G +V + N ++ +S+ D+ +F+++ K
Sbjct: 383 LIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKV 442
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD+I++ L+ G D A ++ +M + ++ YT+++ + G E+
Sbjct: 443 -CTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ +M + D+ N + + G+PE+ + + +E++ PD SY+ L+
Sbjct: 502 HKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHG 561
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K +E +++ ++E GC + + I C G +KAY++ +E P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T +++GL K ++ EA + K K
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 4/243 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
LAK R + L E K+ +LI +G+ G D A +++ + G +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V ++N+LL A ++ ++ + F + K+ +P++++YG+L+ C +KA
Sbjct: 692 VYTWNSLLDALVKAEEINEALVCFQSM-KELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
EM+ +G++ +T++YTT+++ L K GN EA L+ + G D A YN I G
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 252 DPER-LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ L +E R GL + L+ KN+ +++A V L E G + +A
Sbjct: 811 NRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAA-- 868
Query: 311 RTW 313
R+W
Sbjct: 869 RSW 871
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG + F M E G ++N ++ + +K L +E+ K
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK- 616
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++YG ++ D+A L E ++K +E+ V Y+++++ K G +EA
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFLM 279
+ E+ +KG+ +V +N + E + E + M++ P+ ++Y L+
Sbjct: 677 YLILEELMQKGLTPNVYTWNSLLDALV--KAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK ++A ++ +++ G P+ ++ T I L +GN +A +F +
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGV 794
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD ++EGL + +A + +++
Sbjct: 795 PDSACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
>gi|242074484|ref|XP_002447178.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
gi|241938361|gb|EES11506.1| hypothetical protein SORBIDRAFT_06g029920 [Sorghum bicolor]
Length = 643
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 11/266 (4%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS-VISFNALLFA-CTRSRLYDKVPILFD 156
Y C L+ AG+ D A+ FD M R V+S+N L+ C R D + L D
Sbjct: 210 YNC-LLDGLVNAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRTQDGMSRLAD 268
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV--EVTTVTYTTVLNCLY 214
+ ++ L+PDK++Y L++ H G+ + + L EME +G+ E+ Y V+ L
Sbjct: 269 -LREQAELAPDKVTYLTLMQRHYSEGTFPQCIALFQEMEERGMGKEIPQHAYVLVIGALS 327
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPD 271
K G EA ++ M K+G + A Y I + G R KE L + M+ +G++ D
Sbjct: 328 KDGKPFEALAVFERMLKRGCPANAAMYTALIDSM--GKLGREKEAMALFERMKASGIELD 385
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++Y ++ C C+ M+EA + E G + NA + + I +G D+A ++F+
Sbjct: 386 AVTYGVIVNCLCRFGNMEEALSCFRSCVEKGVAVNAIFYTSLIDGFGKTGMVDQAKELFE 445
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKK 357
E + +PD +L++ LVK +
Sbjct: 446 EMIAKGFVPDSYCYNVLIDALVKAGR 471
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 146/354 (41%), Gaps = 74/354 (20%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI----L 154
YL + R Y + G F + F +M+E G + + +L S+ D P +
Sbjct: 282 YLTLMQRHYSE-GTFPQCIALFQEMEERGMGKEIPQHAYVLVIGALSK--DGKPFEALAV 338
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F+ + K+ + Y L+ S G +A+ L M+ G+E+ VTY ++NCL
Sbjct: 339 FERMLKR-GCPANAAMYTALIDSMGKLGREKEAMALFERMKASGIELDAVTYGVIVNCLC 397
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDT 272
+ GN EEA + +KGV ++ A + + + +G G ++ KEL +EM G PD+
Sbjct: 398 RFGNMEEALSCFRSCVEKGVAVN-AIFYTSLIDGFGKTGMVDQAKELFEEMIAKGFVPDS 456
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGC----------------------------- 303
YN L+ K D A YE +E++GC
Sbjct: 457 YCYNVLIDALVKAGRTDIACAFYERMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDS 516
Query: 304 ------SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD---------------F 342
+P A FR LC SG F +A+++ E + IP+ F
Sbjct: 517 MIDKGITPTAAAFRVLANGLCLSGKFSRAWRILDELAPMGVIPETAHEDMINVLCKTGRF 576
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLR-------AWKKVEEELGL 389
L +G+V+K +E G +RT+ N LR A+K V ++G+
Sbjct: 577 KQACKLADGIVQKG--REVPGRVRTMMI----NALRKAGNTDLAFKLVHSKIGI 624
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + M + + FD+M + V + N +L L K ++ + ++
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM-GEF 534
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++Y LL S+C G + L+LL+EM+ +G VTY ++N L K+G E+A
Sbjct: 535 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 594
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L EM K G+ + YN I + G L +EM G P +YN +
Sbjct: 595 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYG 654
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M +A + + N P+ ++ T IY C GN KA+ +F E ++ P
Sbjct: 655 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 714
Query: 342 FNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
T L++GL ++ +++ A+ + + I + P+++
Sbjct: 715 IVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIV 751
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 8/293 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLC 101
+ LD+ S + + +P Y ++ + L+K F + LI E K K++ Y
Sbjct: 558 QGLDLLSEMQRRGCAPNDVTY--NVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTY-N 614
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
LI Y G+ A+ ++M G +V ++N+ ++ C R+ D + L D +
Sbjct: 615 PLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLAN 674
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
NL PD +SY L+ +C G+ KA L +E+ + + T VTY T+L+ L +QG E
Sbjct: 675 --NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELE 732
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A++L EM +G+ D+ Y + + + G +E DEM GL+ D+ +Y +
Sbjct: 733 VAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRI 792
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
K A + E + G P+ + + LC GN ++A ++ ++
Sbjct: 793 VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQK 845
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 8/305 (2%)
Query: 76 KRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+++ ++ +I+ P P L +IR G A M A+ F Q+ + +
Sbjct: 137 EQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQA 196
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N+++ Y+KV L++E+ + + PD ++Y L+ + C G D A+ LLNEM
Sbjct: 197 YNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEM 256
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
+ G++ T YT +++ +K N A L+ EM DV Y I G
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGL--GKAG 314
Query: 255 RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
R+ E EM+ KPDT+ N ++ K +D+ K++E + + C PN T+
Sbjct: 315 RIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYN 374
Query: 312 TWIYHLCGS-GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T I L S + + F+ P T +L++G K +I++A ++ + +
Sbjct: 375 TIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434
Query: 371 K-FPP 374
K FPP
Sbjct: 435 KGFPP 439
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 14/310 (4%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL ++ + Y P Y + +R L K+ R + + + + N+
Sbjct: 284 ALSLFEEMRYMYCRPDVFTYTE--LIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNM 341
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD--EIPKK 161
I G+AG D ++ F++M +V+++N ++ A S+ +V +F E K
Sbjct: 342 INFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESK--SRVSEVFSWFERMKG 399
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+SP +Y +L+ C + +KA+ LL EM+ KG Y ++++ L K +
Sbjct: 400 SGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ E+++ Y V I + G RL + L DEM G P+ +YN L
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHL--GKAGRLDDAINLFDEMSKLGCTPNVYAYNAL 517
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M+ + M+DEA ++E+GC P+ ++ + L +G +A ++ K S +
Sbjct: 518 MSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTI 577
Query: 336 VHKIPDFNTV 345
+NTV
Sbjct: 578 KPDAVSYNTV 587
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 9/275 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK-RFSDIETLIESHKNDPKITQEPYL 100
D L ++ + + P Y + ++ L +SK R S++ + E K I+ P+
Sbjct: 352 DDGLKLFEEMGVSHCIPNVVTY--NTIIKALFESKSRVSEVFSWFERMKGS-GISPSPFT 408
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+ LI + + + AM ++MDE G P ++ +L+ A +++ YD LF E+
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ S ++ Y +++K +G D A+ L +EM G Y +++ L +
Sbjct: 469 ENCGSSSARV-YAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACML 527
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
+EA +M++ G D+ +YN+ I N G P R E++ M+++ +KPD +SYN
Sbjct: 528 DEALTTMRKMQEHGCLPDINSYNI-ILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+++ M +EA ++ + + G + T+ +
Sbjct: 587 VLSALSHAGMFEEAAELMKEMNALGFEYDLITYSS 621
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 146/370 (39%), Gaps = 49/370 (13%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI-----ESHKNDPKITQE 97
KA+ I+ + P + Y + + L ++ + L E H + +T
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIM--LIHEGQYEKVHELYNEMSNEGHCHPDTVTYS 234
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
LI ++ + G D A+R ++M E G + + ++ + LF+E
Sbjct: 235 A----LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEE 290
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ Y PD +Y L++ +G D+A +EM+ + + TV ++N L K G
Sbjct: 291 MRYMY-CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAG 349
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNV----------RITNTY---------GGDP----- 253
++ +L+ EM +V YN R++ + G P
Sbjct: 350 RLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTY 409
Query: 254 -------------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
E+ L++EM + G P +Y L+ K + D A ++++ L+E
Sbjct: 410 SILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE 469
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
N S +A + I HL +G D A +F E + P+ L+ GL + + E
Sbjct: 470 NCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDE 529
Query: 361 AKGVIRTIKK 370
A +R +++
Sbjct: 530 ALTTMRKMQE 539
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 19/325 (5%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K KR ++ L+E D + + N + + G D A+ + +E
Sbjct: 347 LCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 406
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++A++ + R DK + +E+ K PD ++Y ++ C D+A ++
Sbjct: 407 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSK-GCIPDVVTYTSVINGLCQERKVDQAKKM 465
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
L +M G + TV+YT +LN L K GN+ EA + + E+ + Y+V +
Sbjct: 466 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRR 525
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G +L+ EM G P + N L+ C+ E +DEAK+ E NGC+ N
Sbjct: 526 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 585
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
F T I+ C + + A + + + +K PD T +++ L KK +I+EA
Sbjct: 586 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA-------- 637
Query: 370 KKFPPNVLRAWKKVEEELGLVPAPA 394
K +LR +GL+P P
Sbjct: 638 TKLAMKMLR--------VGLIPTPV 654
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 13/310 (4%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTP 129
R K + + T+++ +P ++ +CN I D A+R ++M +
Sbjct: 244 RAGKLRNAMRVLTMMQKAGIEPDLS----ICNTAIHVLVMGNRLDKAVRFLERMQIVEIE 299
Query: 130 RSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+VI++N L+ C RL D + L E+P K SPDKISY ++ C +
Sbjct: 300 PNVITYNCLIKGYCDLHRLEDAME-LIAEMPFK-GCSPDKISYYTVMGFLCKEKRIKEVR 357
Query: 189 ELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L+ +M ++ + VTY T ++ L K G+ +EA E E++ +D Y+ I +
Sbjct: 358 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA-IVH 416
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
++ G ++ KE+++EM G PD ++Y ++ C+ +D+AKK+ + ++GC P
Sbjct: 417 SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKP 476
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N ++ + LC +GN +A ++ S IP+ T +L+ G ++ K EA ++
Sbjct: 477 NTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLV 536
Query: 366 R-TIKKKFPP 374
R IKK F P
Sbjct: 537 REMIKKGFFP 546
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 70/322 (21%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ S+ + G D A ++M G V+++ +++ + R D+ + ++ K+
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM-YKH 472
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY LL C +G+S +A E++N E +TY+ +++ ++G + EA
Sbjct: 473 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 532
Query: 223 ERLWSEMEKKG-----VDLDV--------------------------AAYNVRITNTYGG 251
L EM KKG V++++ A V T G
Sbjct: 533 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 592
Query: 252 -----DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
D E L+D+M + PD ++Y ++ K ++EA K+ + G P
Sbjct: 593 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 652
Query: 307 ATTFRTWIYH---------------------------------LCGSGNFDKAYKVFKES 333
T+RT I+ LC GN ++AYK+ +
Sbjct: 653 PVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKV 712
Query: 334 VMVHKIPDFNTVKLLVEGLVKK 355
+ D NT +L+E + K
Sbjct: 713 LRTASKIDANTCHMLIESYLSK 734
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 170/397 (42%), Gaps = 57/397 (14%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-----HK 89
SE PD L + K + + + L + LA +K ++ I L++S H
Sbjct: 81 FNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRL-LHLLANAKNYNKIRALLDSFAKNAHY 139
Query: 90 NDPKITQE-----PYLCN-------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNA 137
++ I + C L+ +Y + G D A+ FD+ + G S +S N
Sbjct: 140 SNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNP 199
Query: 138 LLFACTRSRLYDKVPILFDEIPKK----------------------------------YN 163
+L + + V ++ E+ ++ +
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
SP I+Y ++ +C +G KA LL EM K + +T+ +++ + N A+
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 224 RLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+++ EM+++G+ +V YN I G + L D+M GLKP+ ++YN L+ +
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK +M+ EA+++ + + + G +PN TF T I +G D A+ + + P+
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRA 379
+T L+ G ++ +KEA R + K+ N L+A
Sbjct: 440 STYNCLIVGFCREGNVKEA----RKLAKEMEGNGLKA 472
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G D A+ D+M +G +V+++NAL+ + ++ + + D+I K+
Sbjct: 340 LINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR- 398
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P+ I++ L+ ++ +G D A L + M + GV TY ++ ++GN +EA
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L EME G+ D+ YN+ + G+ + L+DEM + GL P ++YN L+
Sbjct: 459 RKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG 518
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + A V +E+ G N T+ I C G ++A ++ E + IP+
Sbjct: 519 YFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPN 578
Query: 342 FNTVKLLVEGLVKKKKIKEAKG 363
T +L + +++K I + G
Sbjct: 579 RTTYDILRDEMMEKGFIPDIDG 600
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 10/311 (3%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
D+ + L K +F ++E K P + +I Y +AG A +
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN---TIIDGYCKAGKMFKADALLKE 289
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M + I+FN L+ R +F+E+ ++ L P+ ++Y L+ C +G
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ-GLQPNVVTYNSLINGLCSNG 348
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D+AL L ++M G++ VTY ++N K+ +EA + ++ K+G+ +V +N
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 243 VRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
I + YG G + L M D G+ P+ +YN L+ +C+ + EA+K+ + +E
Sbjct: 409 TLI-DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
NG + T+ + LC G KA ++ E V P T L++G ++
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTA 527
Query: 361 AKGVIRTIKKK 371
A V ++KK
Sbjct: 528 ALNVRTLMEKK 538
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 164/384 (42%), Gaps = 64/384 (16%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
+SS + Y +P S + T+ +L + +S ++T+++ + +P L +L S
Sbjct: 32 FSSPNSTYTTPNSHTFDTP-TISQLIAKQHWSKLKTIVK--ETNP----SSLLQHLFNSE 84
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
Q + + + E G +V F LL ++ Y+K+ L D K + S
Sbjct: 85 AQPDLILCYFKWTQK--EFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNS 142
Query: 168 KI--------SYG--------LLLKSHCDSGSSDKALE---------------------- 189
I S+G +L+ ++ +G D ALE
Sbjct: 143 TIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLV 202
Query: 190 -------------LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
+ EM + + V VT+ V+N L K G ++A + +M+ G
Sbjct: 203 SLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSP 262
Query: 237 DVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
V YN I + Y G + L+ EM + P+ I++N L+ +C++E + AKKV
Sbjct: 263 SVITYNT-IIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+E ++ G PN T+ + I LC +G D+A + + + P+ T L+ G K
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
Query: 355 KKKIKEAKGVIRTI-KKKFPPNVL 377
KK +KEA+ ++ I K+ PNV+
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVI 405
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK-- 160
LI+ G A+ D+M E G V+++N+++ RS + D + K
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS---GDTSLALDLLRKME 220
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ N+ D +Y ++ S C G D A+ L EME KG++ + VTY +++ L K G
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ L +M + + +V +NV + G + EL EM G+ P+ I+YN LM
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YC + EA + + + N CSP+ TF + I C D KVF+ +
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+ T +LV+G + KIK A+ + + + P+V+
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 163/370 (44%), Gaps = 12/370 (3%)
Query: 10 LCTATTAAGSST-TASSISVSKA--KSKLRS---EFDPDKALDIYSSVSKHYASPVSSRY 63
LCT ++ S SSIS + +LRS + D A+ ++ + + P +
Sbjct: 32 LCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDF 91
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQ 122
++ + +A++K+F+ + + + + I Y N +I + + A +
Sbjct: 92 SRFFSA--IARTKQFNLVLDFCKQLELNG-IAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+ +LG +FN L+ + +L D + + PD ++Y ++ C SG
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN-GCQPDVVTYNSIVNGICRSG 207
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+ AL+LL +ME + V+ TY+T+++ L + G + A L+ EME KG+ V YN
Sbjct: 208 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 243 VRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ G L+ +M + P+ I++N L+ + K + EA ++Y+ +
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G SPN T+ T + C +A + V PD T L++G K++ +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 362 KGVIRTIKKK 371
V R I K+
Sbjct: 388 MKVFRNISKR 397
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 127/258 (49%), Gaps = 9/258 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
RL+++ D L+ +K P I +LI+ Y D M+ F + + G
Sbjct: 348 RLSEANNMLD---LMVRNKCSPDIVT---FTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++++ L+ +S LF E+ + + PD ++YG+LL CD+G +KALE+
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
+++ +++ V YTT++ + K G E+A L+ + KGV +V Y V I+
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G L+ +M + G P+ +YN L+ + ++ + + K+ E ++ G S +A++
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 310 FRTWIYHLCGSGNFDKAY 327
+ I L SG DK++
Sbjct: 581 IKMVIDMLL-SGELDKSF 597
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Y A D M +++F +L+ C R+ D + + F I K+
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV-FRNISKR 397
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L + ++Y +L++ C SG A EL EM + GV +TY +L+ L G E+
Sbjct: 398 -GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ +++K +DL + Y I GG E L + G+KP+ ++Y +++
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA + +EE+G +PN T+ T I G+ + K+ +E
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 341 DFNTVKLLVEGLV 353
D +++K++++ L+
Sbjct: 577 DASSIKMVIDMLL 589
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 123/269 (45%), Gaps = 4/269 (1%)
Query: 60 SSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
SS + VR L K+ +++D L++ + + L+ + + G A
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+ +M G ++I++N L+ C ++RL + +L ++ + SPD +++ L+K +
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML--DLMVRNKCSPDIVTFTSLIKGY 378
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C D +++ + +G+ VTY+ ++ + G + AE L+ EM GV DV
Sbjct: 379 CMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 239 AAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y + + G E+ E+ ++++ + + + Y ++ CK +++A ++
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKA 326
L G PN T+ I LC G+ +A
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 136/267 (50%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ G+A F + +QM + G +V+++N L+ + R+ + +F+++ ++
Sbjct: 392 MVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQM-QEM 450
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD+++Y L+ H +G D A+ + M+ G+ T TY+ ++NCL K GN A
Sbjct: 451 GCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAA 510
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
RL+ EM +G ++ YN+ I + + +L +M++AG KPD ++Y+ +M
Sbjct: 511 HRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEV 570
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
++EA+ V+ +++N P+ + I +GN +KA++ + + +P+
Sbjct: 571 LGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPN 630
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T L+ ++ ++ +A +++ +
Sbjct: 631 VPTCNSLLSAFLRVHRLPDAYNLLQNM 657
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LID 261
TYTT++ L + +L +M K G +V YN R+ ++YG L E + +
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYN-RLIHSYG-RANYLGEALNVFN 445
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M++ G +PD ++Y L+ + K +D A +YE ++E G SP+ T+ I L SG
Sbjct: 446 QMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSG 505
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAW 380
N A+++F E V +P+ T +L+ K + + A + R ++ F P+ + +
Sbjct: 506 NLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKV-TY 564
Query: 381 KKVEEELG 388
V E LG
Sbjct: 565 SIVMEVLG 572
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 35/228 (15%)
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R+R + + L +++ K P+ ++Y L+ S+ + +AL + N+M+ G E
Sbjct: 398 RAREFGAINKLLEQMVKD-GCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDR 456
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEM 263
VTY T+++ K G LDVA + + M
Sbjct: 457 VTYCTLIDIHAKAG-----------------FLDVAM-----------------SMYERM 482
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
++ GL PDT +Y+ ++ C K+ + A +++ + + GC PN T+ I + N+
Sbjct: 483 QEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNY 542
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
A K++++ PD T +++E L ++EA+ V +K+
Sbjct: 543 QTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQN 590
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 39/218 (17%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI + +AG D AM +++M E+G +++ ++ +S LF E+
Sbjct: 460 CTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVD 519
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ ++Y +L+ + + AL+L +M+N G + VTY+ V+ L G E
Sbjct: 520 Q-GCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLE 578
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKE-------------------- 258
EAE ++ EM++ D Y + I + +G G+ E+ E
Sbjct: 579 EAEAVFFEMKQNNWVPDEPVYGLLI-DLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSL 637
Query: 259 ---------------LIDEMRDAGLKPDTISYNFLMTC 281
L+ M GL P +Y L++C
Sbjct: 638 LSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSC 675
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 38/298 (12%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFN 136
F+ +E L+ + + ++ E + R+YG+A + + A+ F +M DE RSV SFN
Sbjct: 93 FASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFN 152
Query: 137 ALLFACTRSRLYDKVPILFDEIPK---KYNLSPDKISYGLLLKSHCDSGSSDKALELLNE 193
++L LY + +D + N+SP+ +S+ L++K+ C G D+A+E+
Sbjct: 153 SVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRG 212
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP 253
M K TY T+++ L K+ +EA L
Sbjct: 213 MPEKKCLPDGYTYCTLMDGLCKEERIDEAVLL---------------------------- 244
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+DEM+ G P + YN L+ CK + K+ + + GC PN T+ T
Sbjct: 245 ------LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I+ LC G DKA + + V IP+ T L+ GLVK+++ + ++ +++++
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEER 356
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 146/314 (46%), Gaps = 8/314 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A++++ + + P Y + L K +R + L++ +++ + P +
Sbjct: 204 DRAIEVFRGMPEKKCLPDGYTYCT--LMDGLCKEERIDEAVLLLDEMQSE-GCSPSPVIY 260
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI + G + D M G + +++N L+ C + +L V +L +
Sbjct: 261 NVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K P+ ++YG L+ + LL ME +G + Y+ +++ L+K+G A
Sbjct: 321 SK--CIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKA 378
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
EEA LW +M +KG ++ Y+ I G P KE+++ M +G P+ +Y+ L
Sbjct: 379 EEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSL 438
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M + K + +EA +V+ ++E GCS N + I LCG G +A V+ + + +
Sbjct: 439 MKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 339 IPDFNTVKLLVEGL 352
PD +++GL
Sbjct: 499 KPDTVAYSSMIKGL 512
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 147/351 (41%), Gaps = 23/351 (6%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYL 100
DKA+ + + P Y + L K +R D LI + ++ Q Y
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGT--LINGLVKQRRAMDGARLLISMEERGYRLNQHIYS 366
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
LI + G + AM + +M E G +++ ++A++ R ++ + + +
Sbjct: 367 V-LISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMIS 425
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L P+ +Y L+K +G S++A+++ EM+ G Y+ +++ L G +
Sbjct: 426 SGCL-PNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEM---RDAGLKPDTISYN 276
EA +WS+M G+ D AY+ I G G + +L EM + +PD ++YN
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ C + + A + + + GC P+ T T++ L + + + F E
Sbjct: 545 ILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEE--- 601
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
LV L+K++++ A ++ + K+ W + E+
Sbjct: 602 -----------LVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEI 641
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 136/262 (51%), Gaps = 2/262 (0%)
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
G+A F + DQM G +V+++N L+ + R+ + +F+++ +K PD
Sbjct: 349 GRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQM-QKAGCEPD 407
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
+++Y L+ H +G + A+E+ M+ G+ T TY+ ++NCL K G+ A++L+
Sbjct: 408 RVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFC 467
Query: 228 EMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
EM ++G ++ YN+ I + + +L +M++AG +PD ++Y+ +M +
Sbjct: 468 EMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSG 527
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+DEA+ ++ ++ P+ + + +GN +KA++ ++ + P+ T
Sbjct: 528 YLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCN 587
Query: 347 LLVEGLVKKKKIKEAKGVIRTI 368
L+ ++ ++ +A +++++
Sbjct: 588 SLLSAFLRVNRLPDAYNLLQSM 609
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+LL++M G + T VTY +++ + +A ++++M+K G + D Y I +
Sbjct: 359 KLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIH 418
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G E+ M+ AGL PDT +Y+ ++ C K + A K++ + E GC PN
Sbjct: 419 AKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNL 478
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I + N+ A K++++ PD T +++E L + EA+ +
Sbjct: 479 VTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSE 538
Query: 368 IKKK 371
+K+K
Sbjct: 539 MKRK 542
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 39/218 (17%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI + +AG + AM + +M G +++ ++ ++ LF E+ +
Sbjct: 412 CTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIE 471
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P+ ++Y +++ + + AL+L +M+N G E VTY+ V+ L G +
Sbjct: 472 Q-GCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLD 530
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKE-------------------- 258
EAE ++SEM++K D Y + + + +G G+ E+ E
Sbjct: 531 EAEAIFSEMKRKNWVPDEPVYGL-LVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSL 589
Query: 259 ---------------LIDEMRDAGLKPDTISYNFLMTC 281
L+ M + GL P +Y L++C
Sbjct: 590 LSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSC 627
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 166/342 (48%), Gaps = 16/342 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVR-RLAKSKRFSDIETLIESHKNDPKITQEPYL 100
++A+ ++ + K SP Y L V ++ +S ++ I L++ +++ E
Sbjct: 226 ERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRS--WNKILGLLDEMRSNGLEFDEFTC 283
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I + G+ G+ D A + F ++ G ++N+LL ++ +Y + + E+ K
Sbjct: 284 STVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEK 343
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
N PD ++Y L+ ++ +G ++ + ++ M KG+ +TYTTV+N K G +
Sbjct: 344 N-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKED 402
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNF 277
+A + +M++ G +V YN + G RL+E+ID +MR G P+++++N
Sbjct: 403 KALSFFRQMKESGCVPNVCTYNAILGML--GKKSRLEEMIDMLCDMRSNGCAPNSVTWN- 459
Query: 278 LMTCYCKNEMMDE-AKKVYEGLEENGCSPNATTFRTWI--YHLCGSGNFDKAYKVFKESV 334
M C N+ M + +V+ ++ G PN TF I Y CGS D K+++E +
Sbjct: 460 TMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGS-QID-VVKMYEEMI 517
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
P T L+ L ++ + A+ VI +K K F PN
Sbjct: 518 KAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPN 559
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 5/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R G+ A+R D++ V ++ +L A +R Y++ +F+++ +K
Sbjct: 180 MVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKM-RKT 238
Query: 163 NLSPDKISYGLLLKSHCDSGSS-DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP ++Y ++L + G S +K L LL+EM + G+E T +TV++ ++G +E
Sbjct: 239 GLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDE 298
Query: 222 AERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + ++ ++ +G YN +++ G E L ++ EM PD ++YN L+
Sbjct: 299 ARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEAL-SILKEMEKNNCPPDLVTYNELV 357
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y + +E + + G PNA T+ T I +G DKA F++ +
Sbjct: 358 AAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCV 417
Query: 340 PDFNTVKLLVEGLVKKKKIKE 360
P+ T ++ L KK +++E
Sbjct: 418 PNVCTYNAILGMLGKKSRLEE 438
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 37/302 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +YG+ G ++ +++M + G V ++NALL A R ++ + ++ K
Sbjct: 496 LIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSK- 554
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P++ SY L+L + G+ ++ E+ N + + + T++ +K+
Sbjct: 555 GFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGM 614
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT---------------------------NTY------ 249
ER + E K G D+ +N ++ TY
Sbjct: 615 ERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDM 674
Query: 250 ---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
GG+ + +E++ ++ +G KPD +SYN ++ +C+ +M EA + + +G P
Sbjct: 675 YARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPC 734
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ T++ G G F + +V + P+ T K++V+G K KK KEA +
Sbjct: 735 IVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVS 794
Query: 367 TI 368
I
Sbjct: 795 NI 796
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 177/434 (40%), Gaps = 89/434 (20%)
Query: 9 RLCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLT 68
RL + AG+ T S + V K+ + SE AL I + K+ P Y + +
Sbjct: 305 RLKSEGYVAGTFTYNSLLQVF-GKAGIYSE-----ALSILKEMEKNNCPPDLVTYNELVA 358
Query: 69 --VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
VR + I+T+I IT +I +YG+AG D A+ F QM E
Sbjct: 359 AYVRAGFHEEGADFIDTMIRKGIMPNAIT----YTTVINAYGKAGKEDKALSFFRQMKES 414
Query: 127 GTPRSVISFNALL-FACTRSRLYDKVPIL------------------------------- 154
G +V ++NA+L +SRL + + +L
Sbjct: 415 GCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYV 474
Query: 155 ---FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
F E+ K P++ ++ L+ ++ GS +++ EM G TY +LN
Sbjct: 475 NRVFREM-KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLN 533
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDA--- 266
L ++G+ E AE + +M+ KG + +Y++ + N Y GG+ ++++ +E+ +
Sbjct: 534 ALARRGDWEAAESVILDMKSKGFKPNETSYSLML-NCYAKGGNGRGIEKIEEEIYNGHIF 592
Query: 267 --------------------------------GLKPDTISYNFLMTCYCKNEMMDEAKKV 294
G KPD + +N +++ + KN+M D A ++
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEM 652
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ E+G P+ T+ + + G K ++ K PD + +++G +
Sbjct: 653 LRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCR 712
Query: 355 KKKIKEAKGVIRTI 368
+ ++EA IRT+
Sbjct: 713 QGLMQEA---IRTL 723
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 118 RTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKS 177
R F + + G ++ FN++L ++++YD+ + I ++ L PD ++Y L+
Sbjct: 616 RAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLI-RESGLQPDLVTYNSLMDM 674
Query: 178 HCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+ G K E+L ++ G + V+Y TV+ +QG +EA R SEM G+
Sbjct: 675 YARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPC 734
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+ YN + G G ++E+I M +P+ ++Y ++ YCK + EA
Sbjct: 735 IVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVS 794
Query: 297 GLEE 300
+ E
Sbjct: 795 NITE 798
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR-- 244
AL LL+E+ + + +TT+L+ + G E A ++ +M K G+ + YNV
Sbjct: 193 ALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLD 252
Query: 245 ITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ G ++ L+DEMR GL+ D + + +++ + ++DEA+K + L+ G
Sbjct: 253 VYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYV 312
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
T+ + + +G + +A + KE + PD T LV V+ +E
Sbjct: 313 AGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADF 372
Query: 365 IRT-IKKKFPPNVL 377
I T I+K PN +
Sbjct: 373 IDTMIRKGIMPNAI 386
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
D+M + ++++FN L+ R+ L+++V + ++ ++ +PD Y ++ C
Sbjct: 239 MDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGIC 297
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G + A E+LN M + G++ V Y TVL L +EAE L SEM +K LD
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+N+ + G +R+ EL+++M G PD I+Y ++ +CK ++DEA + + +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 299 E-----------------------------------ENGCSPNATTFRTWIYHLCGSGNF 323
+ GC PN TF T I LC G
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
++A ++ K+ ++ PD + +++GL K K +EA ++ + K PN +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + Q G+ D + +QM G VI++ ++ + L D+ +L +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-SSC 420
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY ++LK C +G A EL+++M +G VT+ T++N L K+G E+A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M G D+ +Y+ I G E EL++ M + G+ P+TI Y+ +
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +++ ++++ +++ +A + I LC D+A F V +P+
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
+T +L++GL + KEA+
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQ 621
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + G+ D A+ M G + +S+ +L C+ R D ++ I +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI--Q 454
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +++ L+ C G ++A+ELL +M G ++Y+TV++ L K G EE
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L + M KG+ + Y+ + + G ++ ++ D ++D ++ D + YN +++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK D A + + NGC PN +T+ I L G +A ++ E
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++NA++ R+ L +P + P+ ++ +++ C G ALE+L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
+EM KG Y +L + G + R+ M KG LD N+ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G + L+ ++ G + D +SYN ++ C + + +++ + + C+PN TF
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIK 369
T I +LC +G F++ ++V + PD +++G+ K+ ++ A ++ R
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 370 KKFPPNVL------------RAWKKVEEEL 387
PNV+ WK+ EE L
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
D+M + ++++FN L+ R+ L+++V + ++ ++ +PD Y ++ C
Sbjct: 239 MDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGIC 297
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G + A E+LN M + G++ V Y TVL L +EAE L SEM +K LD
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+N+ + G +R+ EL+++M G PD I+Y ++ +CK ++DEA + + +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 299 E-----------------------------------ENGCSPNATTFRTWIYHLCGSGNF 323
+ GC PN TF T I LC G
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
++A ++ K+ ++ PD + +++GL K K +EA ++ + K PN +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + Q G+ D + +QM G VI++ ++ + L D+ +L +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-SSC 420
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY ++LK C +G A EL+++M +G VT+ T++N L K+G E+A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M G D+ +Y+ I G E EL++ M + G+ P+TI Y+ +
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +++ ++++ +++ +A + I LC D+A F V +P+
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
+T +L++GL + KEA+
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQ 621
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + G+ D A+ M G + +S+ +L C+ R D ++ I +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI--Q 454
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +++ L+ C G ++A+ELL +M G ++Y+TV++ L K G EE
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L + M KG+ + Y+ + + G ++ ++ D ++D ++ D + YN +++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK D A + + NGC PN +T+ I L G +A ++ E
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++NA++ R+ L +P + P+ ++ +++ C G ALE+L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
+EM KG Y +L + G + R+ M KG LD N+ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G + L+ ++ G + D +SYN ++ C + + +++ + + C+PN TF
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIK 369
T I +LC +G F++ ++V + PD +++G+ K+ ++ A ++ R
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 370 KKFPPNVL------------RAWKKVEEEL 387
PNV+ WK+ EE L
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 156/346 (45%), Gaps = 27/346 (7%)
Query: 40 DPDKALDIYSSVSK-HYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP 98
D + L + VS+ Y+ P++ +A ++ LA+S+ FS++E ++E+ + +
Sbjct: 72 DVELGLKFFDWVSRGQYSGPING-FAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTRE 130
Query: 99 YLCNLIRSYGQAGMFDHAMRTF--------------------DQMDELGTPRSVISFNAL 138
+ +I++Y +G+ + A+ + + + +LG F +
Sbjct: 131 AMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCI 190
Query: 139 LF--ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+ C +L + ++ D + P+ I Y L+ +C G + A L E++
Sbjct: 191 MVKGLCKEGKLEEGRKLIEDRWGQ--GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKL 248
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPER 255
KG T TY ++N K+G+ + +RL EM +G+ ++V YN I Y G +
Sbjct: 249 KGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVK 308
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
E I+ M + G KPD ++YN L++ C++ + EA ++ E G PN ++ I+
Sbjct: 309 AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIH 368
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
C G +D+A E PD T LV GLV ++ A
Sbjct: 369 AYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVA 414
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 11/273 (4%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G A+ T + M E G ++++N L+ R + L ++ K L P+K S
Sbjct: 304 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK-GLMPNKFS 362
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ ++C G D+A L EM +G + VTY +++ L G + A + +M
Sbjct: 363 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 422
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLKE-----LIDEMRDAGLKPDTISYNFLMTCYCKN 285
++GV D YN+ ++ G ++ K L+ EM D + PD Y L+ + +N
Sbjct: 423 ERGVFPDAGIYNILMS----GLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRN 478
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
+DEA+K++E E G +P + I C G A H PD T
Sbjct: 479 GNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 538
Query: 346 KLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
+++G VK+ + A+ + R +K K PNV+
Sbjct: 539 STVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 38/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S G D A++ +Q+ +VI++ L+ A D+ L DE+ +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR- 257
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y +++ C G D+A E++ +E KG E ++Y +L L QG EE
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-------------------------NTYGGDP---- 253
E+L ++M + D +V Y++ IT + Y DP
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 254 ----ERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
RL E ++ M G PD ++YN ++ CKN D+A +++ L E GCSPN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
++++ T L SG+ +A + E + PD T ++ L ++ + EA ++
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 367 TIKK-KFPPNVL 377
++ +F P+V+
Sbjct: 498 DMRSCEFHPSVV 509
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 44/293 (15%)
Query: 81 IETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
+ET++ N I LC LI+ + A+R + +++ G P V ++NAL+
Sbjct: 112 LETMVRKGYNPDVI-----LCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFAYNALI 165
Query: 140 FA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
C +R+ D +L D + K + SPD ++Y +++ S C G D AL++LN++ +
Sbjct: 166 NGFCKMNRIDDATRVL-DRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE 258
+ T +TYT ++ +G +EA +L
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKL--------------------------------- 250
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+DEM GLKPD +YN ++ CK M+D A ++ LE GC P+ ++ + L
Sbjct: 251 -MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G +++ K+ + P+ T +L+ L + KI+EA +++ +K+K
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 142/311 (45%), Gaps = 12/311 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEP 98
D+A ++ ++ P Y ++ +R L ++ + E L+ S K DP +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISY--NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
L I + + G + AM M E G S++ L+ A C RL V I F E
Sbjct: 338 IL---ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL--DVAIEFLE 392
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
PD ++Y +L + C +G +D+ALE+ ++ G + +Y T+ + L+ G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+ A + EM G+D D YN I+ G + EL+ +MR P ++YN
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ +CK +++A V E + NGC PN TT+ I + +G +A ++ + V +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 337 HKIPDFNTVKL 347
I +++ +L
Sbjct: 573 DAISEYSFKRL 583
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA--------------------- 141
+IR + GM D A ++ G VIS+N LL A
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 142 ---------------CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
C ++ + + +L ++ K+ L+PD SY L+ + C G D
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLL--KLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+E L M + G V Y TVL L K G A++A ++ ++ + G + ++YN +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ GD R +I EM G+ PD I+YN +++C C+ M+DEA ++ + P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ T+ + C + + A V + V P+ T +L+EG+
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C SG+ ++L LL M KG + T ++ + N +A R+ +EK G DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 239 AAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
AYN I + + ++D MR PDT++YN ++ C +D A KV
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L + C P T+ I G D+A K+ E + PD T ++ G+ K+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 358 IKEAKGVIRTIK-KKFPPNVL 377
+ A ++R ++ K P+V+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVI 299
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +AG A+ FD M G +V +FNAL+ R +K + DE+
Sbjct: 559 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALA- 617
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD+ +Y ++ + G + KA E ++ N+G+E+ TY +L K G + A
Sbjct: 618 GVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSA 677
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ EM + + + YN+ I GD +L+ +M+ G++PD +Y +
Sbjct: 678 LAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINA 737
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M A K + +E G PN T+ T I+ + +KA + F+E + PD
Sbjct: 738 CCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPD 797
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
L+ L+ + + EA
Sbjct: 798 KAVYHCLMTSLLSRATVAEA 817
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
Q+ D A +M+E G + ++ ++ T +K I+F + K+ +P
Sbjct: 390 QSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRL-KECGFAPSV 448
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
ISYG L+ + G KALE+ ME+ G++ TY+ ++N K + A ++ +
Sbjct: 449 ISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFED 508
Query: 229 MEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+ K G+ DV YN I G G+ +R ++ EM+ +P + ++ ++ + +
Sbjct: 509 VIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGE 568
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
M A ++++ + +GC P TF + L +KA ++ E + PD +T
Sbjct: 569 MRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTT 628
Query: 348 LVEG 351
++ G
Sbjct: 629 IMNG 632
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 42/250 (16%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE- 221
+ P Y L+ ++ ++AL + +M+ +GVE++ VTY+ V+ K GNA++
Sbjct: 332 GIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQS 391
Query: 222 -----AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
AE L EME++G+D + Y+ + T G+ E+ + +++ G P ISY
Sbjct: 392 CNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISY 451
Query: 276 NFLMTCYCK----------NEMMDEAK-------------------------KVYEGLEE 300
L+ Y K ++MM+ A V+E + +
Sbjct: 452 GCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIK 511
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
+G P+ + I CG GN D+A + KE P T ++ G + +++
Sbjct: 512 DGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRR 571
Query: 361 AKGVIRTIKK 370
A + +++
Sbjct: 572 ALEIFDMMRR 581
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 126/271 (46%), Gaps = 8/271 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL--FA----CTRSRLYDKVPILF 155
+LI +Y + A+ +M E G S+++++ ++ FA +S D+ L
Sbjct: 342 SLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLV 401
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
E+ ++ +P I Y ++ + G+ +K L + ++ G + ++Y ++N K
Sbjct: 402 REMEEEGIDAPIDI-YHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTK 460
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTIS 274
G +A + ME G+ ++ Y++ I D + +++ GLKPD +
Sbjct: 461 MGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVL 520
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
YN ++ +C MD A + + +++ P + TF I+ +G +A ++F
Sbjct: 521 YNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMR 580
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
IP +T LV GLV+K+++++A ++
Sbjct: 581 RSGCIPTVHTFNALVLGLVEKRQMEKAVEIL 611
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 122/324 (37%), Gaps = 73/324 (22%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y C LI Y + G A+ M+ G ++ +++ L+ + + + +F+++
Sbjct: 451 YGC-LINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDV 509
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K L PD + Y ++K+ C G+ D+A+ ++ EM+ K T+ T+ +++ + G
Sbjct: 510 IKD-GLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGE 568
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNV----------------------------------R 244
A ++ M + G V +N
Sbjct: 569 MRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTT 628
Query: 245 ITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD------------- 289
I N Y GD + E ++R+ GL+ D +Y L+ CK+ M
Sbjct: 629 IMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQN 688
Query: 290 ----------------------EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
EA + + +++ G P+ T+ ++I C +G+ +A
Sbjct: 689 IPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRAT 748
Query: 328 KVFKESVMVHKIPDFNTVKLLVEG 351
K +E + P+ T L+ G
Sbjct: 749 KTIQEMEALGVKPNVKTYTTLIHG 772
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 13/243 (5%)
Query: 143 TRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT 202
T+ + V F+ I K P + +GL++ + G +A + M +G+ +
Sbjct: 282 TQPENWQAVVSAFERIKK-----PARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPS 336
Query: 203 TVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV------RITNT-YGGDPER 255
+ YT++++ + EEA +M+++GV++ + Y++ +I N + +R
Sbjct: 337 SHVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDR 396
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ L+ EM + G+ Y+ +M Y ++ V++ L+E G +P+ ++ I
Sbjct: 397 AESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLIN 456
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPP 374
G KA +V K + T +L+ G +K K A V IK P
Sbjct: 457 MYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKP 516
Query: 375 NVL 377
+V+
Sbjct: 517 DVV 519
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 93 KITQEPYLC---NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP + +L+ + + A+ FD+M E+G +V+ +N ++ +S+ D
Sbjct: 144 KLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVD 203
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
L + + + PD ++Y L+ C+SG D A +++ M + + T+ +
Sbjct: 204 NALDLLNRMEVD-GIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNAL 262
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRD 265
++ K+G EAE L+ EM ++ +D D+ Y++ I YG + +++ M
Sbjct: 263 IDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI---YGLCMYSRLDEAEQMFGFMVS 319
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G PD ++Y+ L+ YCK++ ++ K++ + + G N T+ I C +G +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNV 379
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
A ++FK V P+ T +L+ GL KI++A ++ ++K
Sbjct: 380 AEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 137/300 (45%), Gaps = 2/300 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L KSK+ + L+ + D +LI +G +D A R M +
Sbjct: 196 LCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPD 255
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V +FNAL+ AC + + L++E+ ++ +L PD ++Y LL+ C D+A ++
Sbjct: 256 VFTFNALIDACVKEGRISEAEELYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDEAEQMF 314
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
M +KG VTY+ ++N K E +L+ EM ++GV + Y V I
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRA 374
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G +E+ M G+ P+ I+YN L+ C N +++A + ++++G + T+
Sbjct: 375 GKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTY 434
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I +C +G A+ ++ + PD T ++ GL KK EA + R +K+
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 40/303 (13%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFA------------------------------- 141
+D + ++QM LG P ++ + N LL
Sbjct: 97 YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGS 156
Query: 142 -----CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
C R+YD + +FD + + P+ + Y ++ C S D AL+LLN ME
Sbjct: 157 LLNGFCRGDRIYDAL-YMFDRMVEM-GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEV 214
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPER 255
G+ VTY ++++ L G ++A R+ S M K+ + DV +N I G
Sbjct: 215 DGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISE 274
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+EL +EM L PD ++Y+ L+ C +DEA++++ + GC P+ T+ I
Sbjct: 275 AEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILIN 334
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPP 374
C S + K+F E + + T +L++G + K+ A+ + + + PP
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPP 394
Query: 375 NVL 377
N++
Sbjct: 395 NII 397
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 10/269 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
D A + S ++K P + + + K R S+ E L E DP I
Sbjct: 238 DDATRMVSCMTKREIYP--DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYS 295
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L + Y + D A + F M G V++++ L+ +S+ + LF E+
Sbjct: 296 LLIYGLCMYSR---LDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
++ + + ++Y +L++ +C +G + A E+ M GV +TY +L+ L G
Sbjct: 353 SQR-GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGK 411
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNF 277
E+A + ++M+K G+D D+ YN+ I G+ +L + GL PD +Y
Sbjct: 412 IEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTA 471
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+M K + EA ++ ++E+G PN
Sbjct: 472 MMLGLYKKGLRGEADALFRKMKEDGILPN 500
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 142/310 (45%), Gaps = 5/310 (1%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
RL K + + + ++ ++D L+ ++ +AG D A + QM+E
Sbjct: 371 RLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIP 430
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+V++F++++ + K ++ K ++P+ ++YG L+ + AL++
Sbjct: 431 NVVTFSSIINGLVKRGCLGKAADYMRKM-KDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY- 249
+M ++GVE +++N L K GN E AE L+ +M+++G+ LD Y + +
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFK 549
Query: 250 -GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G P K + E+ + L PD + YN + C C EAK + + G P+
Sbjct: 550 TGNMPAAFK-VGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQA 608
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T+ T I C G KA K+ KE P+ T LV GL++ +K+AK ++ +
Sbjct: 609 TYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEM 668
Query: 369 KKK-FPPNVL 377
F P L
Sbjct: 669 ASAGFAPTSL 678
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 38/240 (15%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
++ D +SY + L + + G A +L+EM +GV VT +T L L + G EA
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170
Query: 224 RL-----------------WS--------------------EMEKKGVDLDVAAYNVRIT 246
L W+ M +GV LDV YN +
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230
Query: 247 NTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ GD + E+++ M+ G++P+ ++Y L+ YCK + MDEA +YEG+ +G P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T + LC G F +AY +F+E + P+ T L++ L K ++ E+ G++
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLL 350
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 5/267 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G F A +M G ++N ++ A R K L E+ K+ ++ P+ I+
Sbjct: 586 GKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEM-KRNSIKPNLIT 644
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ ++G KA LLNEM + G T++T+ VL + + M
Sbjct: 645 YTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMM 704
Query: 231 KKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
G+ D+ YN V + +G ++DEM G+ PDTI++N L+ +CK+ +
Sbjct: 705 GAGLHADITVYNTLVHVLCCHG-MARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
D A +Y + G SPN TF T + L +G +A V + V P+ T +L
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDIL 823
Query: 349 VEGLVKK-KKIKEAKGVIRTIKKKFPP 374
V G KK K++ + + K F P
Sbjct: 824 VTGYAKKSNKVEALRLYCEMVSKGFIP 850
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 7/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + A+ ++M G V+ +N+L+ S D + + + K
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERM-KAD 251
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y L+ +C D+A L M GV VT + +++ L + G EA
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
L+ EM+K GV + Y I + R E L+ EM G+ D + Y LM
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSL--AKARRGSESLGLLGEMVSRGVVMDLVMYTALM 369
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K ++EAK V + + +PN T+ + C +GN D A +V + I
Sbjct: 370 DRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
P+ T ++ GLVK+ + +A +R +K PNV+
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVV 468
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 159/409 (38%), Gaps = 73/409 (17%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D AL++ + P Y + K K + +L E +
Sbjct: 237 DADAALEVVERMKADGVEPNVVTYTA--LIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVT 294
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR------------- 146
L L+ + G F A F +MD++G + +++ L+ + ++R
Sbjct: 295 LSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMV 354
Query: 147 ----LYDKV--PILFDEIPKKY---------------NLSPDKISYGLLLKSHCDSGSSD 185
+ D V L D + K+ N++P+ ++Y +L+ +HC +G+ D
Sbjct: 355 SRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNID 414
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A ++L +ME K V VT+++++N L K+G +A +M+ G+ +V Y I
Sbjct: 415 GAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLI 474
Query: 246 TNTY------------------------------------GGDPERLKELIDEMRDAGLK 269
+ G+ E + L +M + GL
Sbjct: 475 DGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLL 534
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
D ++Y LM K M A KV + L E SP+A + +I LC G F +A
Sbjct: 535 LDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSF 594
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
KE PD T ++ ++ K +A +++ +K+ PN++
Sbjct: 595 LKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLI 643
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 130/275 (47%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +AG+ A ++M G + ++ +L AC+ SR D V + E+
Sbjct: 648 LVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPD-VILEIHELMMGA 706
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D Y L+ C G + A +L+EM +G+ T+T+ ++ K + + A
Sbjct: 707 GLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNA 766
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++++M +G+ ++A +N + G ++ +M+ GL+P+ ++Y+ L+T
Sbjct: 767 FAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTG 826
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K EA ++Y + G P A+T+ + + +G ++A ++F E +
Sbjct: 827 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHT 886
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPN 375
+T +L+ G K + E + +++ +K+ F P+
Sbjct: 887 SSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPS 921
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 2/222 (0%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
GM +A D+M G I+FNAL+ +S D ++ ++ + LSP+ +
Sbjct: 726 GMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ-GLSPNIAT 784
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
+ LL +G +A +L++M+ G+E +TY ++ K+ N EA RL+ EM
Sbjct: 785 FNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 844
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG + YN +++ G + KEL EM+ G+ + +Y+ L+ + K
Sbjct: 845 SKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGI 904
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
E + + + ++E G P+ T + G +A ++ K
Sbjct: 905 EVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLK 946
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 100/200 (50%), Gaps = 8/200 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFAC-TRSRLYDKVPILFDEIPKK 161
LI + ++ D+A + QM G ++ +FN LL + R+ + +L D KK
Sbjct: 753 LILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDM--KK 810
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ ++Y +L+ + + +AL L EM +KG TY ++++ K G +
Sbjct: 811 VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQ 870
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI---TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A+ L+SEM+++GV + Y++ + + G R+ L+ +M++ G KP + + +
Sbjct: 871 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRI--LLKDMKELGFKPSKGTISSM 928
Query: 279 MTCYCKNEMMDEAKKVYEGL 298
+ + M EA+++ + L
Sbjct: 929 SRAFSRPGMTGEARRLLKTL 948
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 122/296 (41%), Gaps = 2/296 (0%)
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
+FS+ ++ ++ +N + +I + + G A++ +M ++I++
Sbjct: 587 KFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYT 646
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
L+ + + K L +E+ +P +++ +L++ S D LE+ M
Sbjct: 647 TLVVGLLEAGVVKKAKFLLNEMASA-GFAPTSLTHQRVLQACSGSRRPDVILEIHELMMG 705
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPER 255
G+ Y T+++ L G A A + EM +G+ D +N I + +
Sbjct: 706 AGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDN 765
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ +M GL P+ ++N L+ + EA V +++ G PN T+ +
Sbjct: 766 AFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVT 825
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
N +A +++ E V IP +T L+ K + +AK + +K++
Sbjct: 826 GYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG + A M ++G ++++N LL + + + + E+ +
Sbjct: 226 LISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRS- 284
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALE-LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D SY LLK HC D+ +L EME +G V+Y+T++ + N ++
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGF-CDVVSYSTLIETFCRASNTKK 343
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L+ EM +KG+ +V + I G+ K+L+D+M + GL PD I Y ++
Sbjct: 344 AYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ +D+A ++ + E+ +P+A ++ + I LC SG +A K+F++ P
Sbjct: 404 HLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGV 364
D T K ++ GL+++KK+ A V
Sbjct: 464 DELTFKFIIGGLIREKKLSAAYKV 487
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 10/246 (4%)
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
S++ +NAL+ ++ +K L K PD ++Y +LL + D+ +A +
Sbjct: 219 SIVVYNALISGFCKAGRIEKAEAL-KSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGV 277
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS----EMEKKGVDLDVAAYNVRI- 245
+ EM G+++ +Y +L + +R +S EME +G DV +Y+ I
Sbjct: 278 MTEMVRSGIQLDAYSYNQLLK---RHCRVSHPDRCYSFMLKEMEPRGF-CDVVSYSTLIE 333
Query: 246 TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
T + ++ +L +EMR G+ + +++ L+ + + AKK+ + + E G SP
Sbjct: 334 TFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSP 393
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ + T + HLC SGN DKAY +F + + PD + L+ GL + ++ EA +
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Query: 366 RTIKKK 371
+K K
Sbjct: 454 EDMKGK 459
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 9/246 (3%)
Query: 93 KITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
KI EP L L+ Y M A +M G S+N LL R D
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 150 KV-PILFDEI-PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ + E+ P+ + D +SY L+++ C + ++ KA +L EM KG+ VT+T
Sbjct: 308 RCYSFMLKEMEPRGF---CDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFT 364
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDA 266
+++ ++GN+ A++L +M + G+ D Y + + G+ ++ + ++M +
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEH 424
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ PD ISYN L++ C++ + EA K++E ++ C P+ TF+ I L A
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAA 484
Query: 327 YKVFKE 332
YKV+ +
Sbjct: 485 YKVWDQ 490
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 125/343 (36%), Gaps = 75/343 (21%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL--------FACTRSRLYDKV 151
+ NL++S GM D+A++ FD+M +N + F + D +
Sbjct: 16 IANLVKS----GMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRDMM 71
Query: 152 PILFDEIP-------------KKYNLS-------------PDKISYGLLLKSHCDSGSSD 185
P+ F IP KK+ L PD ++ + L C
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVG 131
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD---------- 235
A++ M +G E V+YT ++N L++ G +A +W+ M + GV
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 236 --------------------------LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
L + YN I+ G E+ + L M G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGC 251
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
+PD ++YN L+ Y N M+ A+ V + +G +A ++ + C + D+ Y
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYS 311
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ + D + L+E + K+A + +++K
Sbjct: 312 FMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQK 354
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
L E + +T +LI+++ + G A + DQM ELG I + +L
Sbjct: 347 LFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLC 406
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
+S DK +F+++ + + ++PD ISY L+ C SG +A++L +M+ K
Sbjct: 407 KSGNVDKAYGIFNDMIE-HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDE 465
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+T+ ++ L ++ A ++W +M KG LD
Sbjct: 466 LTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLD 499
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 115 HAMRTFDQMDELGTPRS---VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
H R + M + PR V+S++ L+ R+ K LF+E+ +K + + +++
Sbjct: 305 HPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQK-GIVTNVVTF 363
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+K+ G+S A +LL++M G+ + YTT+L+ L K GN ++A ++++M +
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIE 423
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+ D +YN I+ G +L ++M+ PD +++ F++ + + +
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSA 483
Query: 291 AKKVYEGLEENG 302
A KV++ + + G
Sbjct: 484 AYKVWDQMMDKG 495
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 1/199 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L +++Y + + SG D A+++ +EM + V + Y + L K+ E AE
Sbjct: 5 LGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAE 64
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCY 282
++ +M G L Y+ I+ E + L+ +M G PD ++N +
Sbjct: 65 AIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLL 124
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ + A + + + + G P+ ++ I L +G A +++ + PD
Sbjct: 125 CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN 184
Query: 343 NTVKLLVEGLVKKKKIKEA 361
LV GL +K+ A
Sbjct: 185 KACAALVVGLCHARKVDLA 203
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 129/268 (48%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M++ V+ + +++ + + R + LF ++ +
Sbjct: 176 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ- 234
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ + C+ LLN+M N + V ++TV++ L K+G EA
Sbjct: 235 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 294
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M ++GV+ DV Y + + + + ++ D M G PD ISY L+
Sbjct: 295 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 354
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +D+A ++E + P+ T+ T +Y LC G A +F E V ++PD
Sbjct: 355 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPD 414
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T +L++ L K + ++EA +++ I+
Sbjct: 415 LVTYSILLDSLCKNRHLEEAMALLKAIE 442
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 43/358 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL ++ + + P +A+ LT +AK K +S + +L + + + Y
Sbjct: 47 DDALSSFNRLLHMHPPPSIVDFAKLLT--SIAKMKHYSTVLSL-STQMDSFGVPPNVYTL 103
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI S+ A ++ +LG +F L+ C ++ + + LFD++
Sbjct: 104 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALH-LFDKMI 162
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ P+ ++YG L+ C G++ A+ LL ME + V YT++++ L K
Sbjct: 163 DE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221
Query: 220 EEAERLWSEMEKKGVDLDVAAY------------------------------NVRITNTY 249
EA L+S+M +G+ D+ Y +V I +T
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281
Query: 250 ------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G E++D M G++PD ++Y LM +C MDEA KV++ + G
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+P+ ++ T I C DKA +F+E IPD T L+ GL ++++A
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDA 399
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 2/200 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A++ FD M G VIS+ L+ + DK LF+E+ +K + PD +Y
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDTKTYNT 385
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A+ L +EM +G VTY+ +L+ L K + EEA L +E
Sbjct: 386 LMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASN 445
Query: 234 VDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
++ D+ YN+ I G+ E ++L + GL P +YN ++ CK +++EA
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 505
Query: 293 KVYEGLEENGCSPNATTFRT 312
K++ ++ N CSP+ T+ T
Sbjct: 506 KLFMEMDGNDCSPDGCTYNT 525
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 6/321 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A +++S + SP Y V L + + TL+ N +
Sbjct: 223 EAFNLFSQMVGQGISPDIFTYTS--LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 280
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ + + G A D M + G V+++ L+ C +S + + V + FD + +K
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV-FDMMVRK 339
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD ISY L+ +C DKA+ L EM K T TY T++ L G ++
Sbjct: 340 -GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM +G D+ Y++ + + E L+ + + L PD YN ++
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ ++ A+ ++ L G P+ T+ I+ LC G ++A K+F E P
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
D T + G ++ + A
Sbjct: 519 DGCTYNTIARGFLQNNETLRA 539
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 119/258 (46%), Gaps = 4/258 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F QM G + ++ +L+ A + V L +++ + PD + + ++
Sbjct: 224 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPDVVIFSTVV 282
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G +A E+++ M +GVE VTYTT+++ Q +EA +++ M +KG
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342
Query: 236 LDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV +Y I N Y ++ L +EM PDT +YN LM C + +A
Sbjct: 343 PDVISYTTLI-NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + G P+ T+ + LC + + ++A + K + PD ++++G+
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 461
Query: 354 KKKKIKEAKGVIRTIKKK 371
+ +++ A+ + + K
Sbjct: 462 RAGELEAARDLFSNLSSK 479
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 107 YG--QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNL 164
YG G A+ F +M G +++++ LL + ++R ++ L I + NL
Sbjct: 388 YGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAI-EASNL 446
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
+PD Y +++ C +G + A +L + + +KG+ + TY +++ L K+G EA +
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLM 279
L+ EM+ D YN I + + E L+ +L++EM G D+ FLM
Sbjct: 507 LFMEMDGNDCSPDGCTYNT-IARGFLQNNETLRAIQLLEEMLARGFSADSC---FLM 559
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ + FD+M G RSV S+ AL+ A R+ Y+ L + + K+
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERM-KRE 212
Query: 163 NLSPDKISYGLLLKSHCDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP+ ++Y ++ + C G D L L EM ++GV+ VTY T+L+ +G +
Sbjct: 213 RVSPNILTYNTVINA-CARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGD 271
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
EAE ++ M + G+ ++ Y+ I T+G G E++ L+ EM G PD SYN L
Sbjct: 272 EAEMVFKTMIEGGIVPEITTYSY-IVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVL 330
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K + EA V++ ++ GC PNA+T+ + G +D ++F +
Sbjct: 331 IEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSA 390
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
PD T +L+ + KE + + + PN+
Sbjct: 391 EPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM 429
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 134/271 (49%), Gaps = 3/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKK 161
LI +YG+ G ++ ++ ++M +++++N ++ AC R L ++ + LF E+ +
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEM-RH 247
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y LL + G D+A + M G+ TY+ ++ K G E+
Sbjct: 248 EGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEK 307
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EME +G D+++YNV I + G + ++ +M+ AG P+ +Y+ L+
Sbjct: 308 VAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLN 367
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K+ D+ ++++ ++E+ P+ATT+ I G F + +F + V + P
Sbjct: 368 LYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDP 427
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ T + LV K ++AK ++ + K
Sbjct: 428 NMETYEGLVFACGKGGLHEDAKKILFHMNGK 458
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 2/218 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G +K E+ +EM ++GV + +YT ++N
Sbjct: 134 LFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAY 193
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPD 271
+ G E + L M+++ V ++ YN I GD E L L EMR G++PD
Sbjct: 194 GRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPD 253
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L++ + DEA+ V++ + E G P TT+ + G +K + K
Sbjct: 254 LVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLK 313
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
E +PD ++ +L+E K IKEA V + ++
Sbjct: 314 EMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 120/269 (44%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G+ D A F M E G + +++ ++ + +KV +L E+ +
Sbjct: 260 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD SY +L+++H GS +A+++ +M+ G TY+ +LN K G ++
Sbjct: 320 YL-PDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDV 378
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M++ + D YN+ I GG + + L ++ D + P+ +Y L+
Sbjct: 379 RELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFA 438
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + ++AKK+ + G P++ + I + +D+A F V
Sbjct: 439 CGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKST 498
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+T L+ + KE + ++ +++
Sbjct: 499 IDTYNSLIHTFARGGLYKEFEAILSRMRE 527
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 133/296 (44%), Gaps = 10/296 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+D++ + P +S Y+ + + K R+ D+ L K
Sbjct: 342 EAMDVFKQMQAAGCVPNASTYS--ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNI 399
Query: 103 LIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLY-DKVPILFDEIPK 160
LIR +G+ G F + F D +DE P ++ ++ L+FAC + L+ D ILF K
Sbjct: 400 LIRVFGEGGYFKEVVTLFHDLVDENIDP-NMETYEGLVFACGKGGLHEDAKKILFHMNGK 458
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P +Y L++++ + D+AL N M G + T TY ++++ + G +
Sbjct: 459 --GIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYK 516
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E E + S M + G+ + +++ I G E +K + EM + D + +
Sbjct: 517 EFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV-EMEKMRCELDEQTLEGV 575
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ YC ++DE+K+ + ++ +G P+ + + +G +D A ++ E +
Sbjct: 576 LGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMI 631
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI +YGQA ++D A+ F+ M+E+G+ ++ ++N+L+ R LY + + + ++
Sbjct: 469 GLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRM-RE 527
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y +S + S+ +++ + SG ++A++ EME E+ T VL G +E
Sbjct: 528 YGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDE 587
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ + E++ G+ V Y + + G + EL+DEM +K S + ++
Sbjct: 588 SKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM----IKTRVSSIHQVIG 643
Query: 281 CYCKNEMMDEA-----KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
K + D++ + V++ L GC + T + L G +A +V E+
Sbjct: 644 QMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATK 703
Query: 336 VHKIPD-FNTVKLL 348
P+ F KL+
Sbjct: 704 RGLFPELFRQSKLV 717
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L K ++ + + +ES P I+ L I ++ + G AM F QM G
Sbjct: 298 TFGKLGKLEKVAMLLKEMESEGYLPDISSYNVL---IEAHAKLGSIKEAMDVFKQMQAAG 354
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +++ LL + YD V LF ++ K+ + PD +Y +L++ + G +
Sbjct: 355 CVPNASTYSILLNLYGKHGRYDDVRELFLQM-KESSAEPDATTYNILIRVFGEGGYFKEV 413
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L +++ ++ ++ TY ++ K G E+A+++ M KG+ AY+ I
Sbjct: 414 VTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI-E 472
Query: 248 TYGGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YG + L+ + M + G K +YN L+ + + + E + + + E G S
Sbjct: 473 AYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKE 332
NA +F I SG +++A K F E
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAFVE 559
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDE--LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+ + + G + ++R F M P I + ++ R L +K +FDE+
Sbjct: 118 VFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHI-YTIIISLLGREGLLEKCSEIFDEMAS 176
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN-CLYKQGNA 219
+ + SY L+ ++ +G + +LELL M+ + V +TY TV+N C +
Sbjct: 177 Q-GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDW 235
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
E L++EM +GV D+ YN ++ G + + + M + G+ P+ +Y+++
Sbjct: 236 EGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYI 295
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K +++ + + +E G P+ +++ I G+ +A VFK+
Sbjct: 296 VETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGC 355
Query: 339 IPDFNTVKLLV 349
+P+ +T +L+
Sbjct: 356 VPNASTYSILL 366
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+ L+ K G ++L L M+ + + YT +++ L ++G E+ ++ EM
Sbjct: 115 FSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEM 174
Query: 230 EKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+GV V +Y I N YG G E EL++ M+ + P+ ++YN ++ + ++
Sbjct: 175 ASQGVIRSVFSYTALI-NAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDL 233
Query: 288 MDEAK-KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
E ++ + G P+ T+ T + G D+A VFK + +P+ T
Sbjct: 234 DWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYS 293
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
+VE K K+++ +++ ++ + + P++
Sbjct: 294 YIVETFGKLGKLEKVAMLLKEMESEGYLPDI 324
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y + G + A R +M E G V ++ L+ + R V FDE+ K
Sbjct: 413 LLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSK- 471
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y + + GS+ +A +L M ++G+ TVTY L+ L K GN ++A
Sbjct: 472 GLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDA 531
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
LW +M G+ D Y I + G +++ D M +GL P ++Y +
Sbjct: 532 YVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ + A ++ + E G PN T+ I+ LC G + AY+ F E + P+
Sbjct: 592 YCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPN 651
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T LL++G K+ +EA
Sbjct: 652 KYTYTLLIDGNCKEGNWEEA 671
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y G + A +M+ G +V+++N ++ RS + + F E+ +
Sbjct: 308 LITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM-RAM 366
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD I+Y L+ +C +G+ +AL L +++ G+ + +TY +L+ + G+ EEA
Sbjct: 367 GLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEA 426
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R EM ++G DV+ Y + + + + ++E DEM GL+PD +YN ++
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
EA ++ E + G S + T+ ++ LC SGN AY ++ + V PD
Sbjct: 487 ELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD 546
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L+ ++ +++EA+ + + PP+ +
Sbjct: 547 CITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 8/307 (2%)
Query: 87 SHKNDPKITQEPYLCNLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS 145
+H P +E CNL+ R+ +D + +M +LG S++++N LL + R
Sbjct: 188 AHHGVPPFIKE---CNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFRE 244
Query: 146 RLYDKVPILFDEI-PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
D+ L E+ + P ++Y +++ G +KA +L++ M + +
Sbjct: 245 GRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAF 303
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM 263
T+ ++ + +G+ E+A L EME +G+ V YN I + G+ E + EM
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
R GL PD I+YN L+ YCK + EA ++ L+ G +P+ T+ + C G+
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVLRAWKK 382
++A + +E V PD +T +L+ G K + + + + K P+ +
Sbjct: 424 EEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483
Query: 383 VEEELGL 389
+ EL L
Sbjct: 484 ISAELIL 490
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 38/310 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I ++G + A F +M +G +I++N+L+ ++ + LF ++ K+
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDL-KRA 401
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P ++Y +LL +C G ++A EM +G + TYT ++N K N
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMV 461
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI---------------------------TNTYG----- 250
+ EM KG+ D AYN RI T TY
Sbjct: 462 REFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDG 521
Query: 251 ----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G+ + L +M GL+PD I+Y L+ +C+ + EA+ +++G+ +G P+
Sbjct: 522 LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPS 581
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVI 365
A T+ +I+ C GN AY F++ + P+ T +L+ L + + A +
Sbjct: 582 AVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFH 641
Query: 366 RTIKKKFPPN 375
+++ PN
Sbjct: 642 EMLERGLSPN 651
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 4/145 (2%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
Y C LI ++ + G A FD M G P S +++ + A C R LY F +
Sbjct: 550 YTC-LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYG-WFQK 607
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ ++ + P++++Y +L+ + C G ++ A + +EM +G+ TYT +++ K+G
Sbjct: 608 MLEE-GVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEG 666
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYN 242
N EEA RL+SEM + G+ D +N
Sbjct: 667 NWEEAIRLYSEMHQHGIHPDHCTHN 691
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 136/266 (51%), Gaps = 9/266 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR--LYDKVPILFDEIPK 160
LI + +AGM + A++ F +M+++G +++++N L+ + + R +Y V LF+++ +
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD-LFNKL-E 341
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L+P ++Y L++ CD+ +A++ +EME K +TY+ +++ L K +
Sbjct: 342 GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAP-NVITYSILIDGLCKVRRMK 400
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA + +M+ G V Y I G+ + ++M+ AG P+T+ +N L+
Sbjct: 401 EAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLI 460
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK E ++ ++ + GC P+ T+ I LC + + A ++F
Sbjct: 461 DGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA--- 517
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
P+ T L+ GL +KK++EA+ ++
Sbjct: 518 PNVTTFNFLIRGLCAQKKVEEARNIL 543
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 149/333 (44%), Gaps = 19/333 (5%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
S L S D+AL ++ V +P + Y ++ +R K + ++ K+
Sbjct: 5 SGLVSARKHDQALRLFKEVLAGLFAPNAHTY--NVLIRGFCKGGQMHQAVSVFSDMKSSG 62
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL---FACTRSRLYD 149
+ + L+ + G A++ F +M + S N LL F R R D
Sbjct: 63 LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR--D 120
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS----DKALELLNEMENKGVEVTTVT 205
+ L D +K + S +Y L+LK C S ++A+E EM+ GVE +
Sbjct: 121 ALAHLQDM--RKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLES 178
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEM 263
Y +L+ L G EA L+S M D+ YNV + + Y G + L+ E+
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNV-LMDGYCKIGQTYEAQSLMKEI 234
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
AG +P+ +Y+ ++ CYCK + ++EA +V+ + E+ C PNA TF T I C +G
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ A K+F E + T L++ L KK+
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 327
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 10/272 (3%)
Query: 110 AGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKI 169
A + AM F +M G + S++ LL A + S + LF + SPD +
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM----TCSPDIM 209
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+Y +L+ +C G + +A L+ E+ G E TY+ ++NC K EEA ++ +M
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 269
Query: 230 EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM- 287
+ + +N I G E +L EM G K ++YN L+ CK
Sbjct: 270 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 329
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVK 346
+ A ++ LE G +P T+ + I C + +A + F E M K P+ T
Sbjct: 330 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDE--MEGKCAPNVITYS 387
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+L++GL K +++KEA + +K + P V+
Sbjct: 388 ILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVV 419
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 8/197 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI+ + A AM+ FD+M+ P +VI+++ L+ C R+ + L D K
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEMEGKCAP-NVITYSILIDGLCKVRRMKEAAKTLEDM--K 410
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ +P ++YG L+ C G AL +M+ G TV + T+++ L K A
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLM 279
+ RL M +G DV YN I+ + E + L D M A P+ ++NFL+
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA---PNVTTFNFLI 527
Query: 280 TCYCKNEMMDEAKKVYE 296
C + ++EA+ + +
Sbjct: 528 RGLCAQKKVEEARNILD 544
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%)
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L E+ P+ +YN L+ +CK M +A V+ ++ +G PNA+T T + LC
Sbjct: 19 LFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLC 78
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
G A K+F+E +P + +L+ G ++++A ++ ++K
Sbjct: 79 EIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRK 130
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 134/295 (45%), Gaps = 2/295 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K + F E ++ + E + NL+ + G A +++ + G
Sbjct: 292 VLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
S+ +NAL+ + + D+ LF+ + K L P+ ++Y +L+ S C G D AL
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHK-GLFPNDVTYSILIDSFCKRGKLDVAL 410
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
L +M G++ T Y+++++ K G A+ L+ EM G+ +V Y I+
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGY 470
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ L EM G+ P+T ++ L++ C M EA K++ + E PN
Sbjct: 471 CKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNE 530
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
T+ I C GN +A+++ E V +PD T + L+ GL ++ EA+
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 141/315 (44%), Gaps = 43/315 (13%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y + G +A R + +M G + +F AL+ + + LF E+ +
Sbjct: 465 SLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE- 523
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+N+ P++++Y +L++ HC G++ +A ELL+EM KG+ T TY +++ L G E
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 222 AERLWS-----------------------------------EMEKKGVDLDVAAYNVRIT 246
A + EM +GV +D+ Y+V I
Sbjct: 584 AREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLI- 642
Query: 247 NTYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
YG D + +L+ +M D GL+PD + Y ++ K + A +++ + G
Sbjct: 643 --YGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG 700
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C PN T+ I LC G DKA + +E + + +P+ NT ++ L + I++A
Sbjct: 701 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 760
Query: 363 GVIRTIKKKFPPNVL 377
+ + + F N +
Sbjct: 761 QLHDVLLEGFLANTV 775
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
KK+ ++P Y L+ S C G D+A L N M +KG+ VTY+ +++ K+G
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ A +M + G+ V Y+ I+ + G K L DEM GLKP+ + Y L
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ YCK + A ++Y + G SPN TF I LC + +A K+F E V +
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEE--ELGLVP 391
IP+ T +L+EG K+ N +RA++ ++E E GLVP
Sbjct: 527 IPNEVTYNVLIEGHCKEG------------------NTVRAFELLDEMVEKGLVP 563
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 136/319 (42%), Gaps = 38/319 (11%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L + R S+ + + + + E L+ Y + G D A+ +M G
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++ ++ L++ R + + L ++ + L PD + Y ++ ++ +G+ A
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ-GLRPDNVLYTTMIDANAKAGNLKMAF 690
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM------------------- 229
L + M ++G VTYT ++N L K G ++AE L EM
Sbjct: 691 GLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 750
Query: 230 ------EK---------KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTI 273
EK +G + YN+ I G + E++ M D+G+ PD I
Sbjct: 751 TSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
SY+ ++ YC+ + EA K++E + G +P+ + IY C +G KA+++ ++
Sbjct: 811 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFEL-RDD 869
Query: 334 VMVHKI-PDFNTVKLLVEG 351
+M + P+ T L+ G
Sbjct: 870 MMRRGVKPNRATYNSLIHG 888
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L + R S I+ L + H + Y +I + +AG A +D M G +
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYT-TMIDANAKAGNLKMAFGLWDIMVSEGCLPN 704
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++ AL+ + L DK +L E+ +L P++ +Y L G+ +KA++L
Sbjct: 705 VVTYTALINGLCKIGLMDKAELLCREMLASNSL-PNQNTYACFLDYLTSEGNIEKAIQL- 762
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
+++ +G TVTY ++ K G +EA + M G+ D +Y+ I
Sbjct: 763 HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 822
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
GD + +L + M + G+ PDT++YNFL+ C + +A ++ + + G PN T+
Sbjct: 823 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATY 882
Query: 311 RTWIYHLC 318
+ I+ C
Sbjct: 883 NSLIHGTC 890
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+K N S + + LL++++ + L ++ M + G+ T + VLN L +
Sbjct: 138 RKCNFST-TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQF 196
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
A L+ E+ G+ DV Y + + D R +E+I M +G +YN
Sbjct: 197 RMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVF 256
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CKN+ + EA ++ L G + T+ T + LC F+ ++ E +
Sbjct: 257 IRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGF 316
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P V LV+GL KK I A ++ +KK
Sbjct: 317 VPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK 348
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 106/276 (38%), Gaps = 37/276 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI++Y Q + M + G + + + +L R R + LFDEI
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS- 209
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD Y +++S C+ +A E++ ME+ G +++ TY + L K
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKN------ 263
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+R+W +E K ++ +Y GL+ D +Y L+
Sbjct: 264 QRVWEAVEIK----NLLSYK------------------------GLRADVGTYCTLVLGL 295
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK E + +++ + E G P+ + L GN A+ + + P
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
L+ + K K+ EA+ + + K FP +V
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDV 391
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 136/281 (48%), Gaps = 8/281 (2%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---YLCNLIRSYGQAGM 112
+ P S + ++ + ++ + E + E N+ + + +P +I Y +AG
Sbjct: 206 SGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGD 265
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A + F QM E G P S ++FN+L+ T Y +V ++D++ ++ L PD +SY
Sbjct: 266 YAQARKLFAQMSERGIPLSTVTFNSLMSFETD---YKEVSNIYDQM-QRTALKPDVVSYS 321
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+K++ + ++AL + EM + GV T +Y +++ G EEA ++ M +
Sbjct: 322 LLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRH 381
Query: 233 GVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V+ D+ +Y + D + ++ +++ GLKP+ + Y LM Y K ++
Sbjct: 382 RVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERV 441
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+VYE + G PN T + T + + +F A FKE
Sbjct: 442 MRVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKE 482
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG+ G F A R M++ G SVIS AL+ A R++ Y K +F + +
Sbjct: 148 LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRM-QTS 206
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGNA 219
P ++Y ++LKS + +A + ++ N+ + + ++ K G+
Sbjct: 207 GPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDY 266
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L+++M ++G+ L +N ++ + D + + + D+M+ LKPD +SY+ L+
Sbjct: 267 AQARKLFAQMSERGIPLSTVTFNSLMS--FETDYKEVSNIYDQMQRTALKPDVVSYSLLI 324
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K +EA V+E + + G P ++ I SG ++A+ VFK ++ H++
Sbjct: 325 KAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFK-AMRRHRV 383
Query: 340 -PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD + +V V + A+ R IK+ PNV+
Sbjct: 384 EPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVV 423
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 103/245 (42%), Gaps = 11/245 (4%)
Query: 38 EFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN-DPKITQ 96
E D + +IY + + P Y+ L ++ K++R + + E + + T+
Sbjct: 295 ETDYKEVSNIYDQMQRTALKPDVVSYS--LLIKAYGKARREEEALAVFEEMLDAGVRPTR 352
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
+ Y LI ++ +G+ + A F M + S+ ++ A + D F
Sbjct: 353 KSYNI-LIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFR 411
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
I K+ L P+ + YG L+K + + ++ + + M +GVE YTT+++ +
Sbjct: 412 RI-KEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVHGRN 470
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGL----KPDT 272
+ A + EME +G D A N+ + + PE +E + + + KPD
Sbjct: 471 SDFGNAVIWFKEMEARGYPADKKAKNILL--SLAKTPEEQEEANELTGNCAIQLEAKPDG 528
Query: 273 ISYNF 277
+Y
Sbjct: 529 TTYGL 533
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ + FD+M G RSV S+ AL+ A R+ Y+ L + + K+
Sbjct: 154 IISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERM-KRE 212
Query: 163 NLSPDKISYGLLLKSHCDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP+ ++Y ++ + C G D L L EM ++GV+ VTY T+L+ +G +
Sbjct: 213 RVSPNILTYNTVINA-CARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGD 271
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
EAE ++ M + G+ ++ Y+ I T+G G E++ L+ EM G PD SYN L
Sbjct: 272 EAEMVFKTMIEGGIVPEITTYSY-IVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVL 330
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K + EA V++ ++ GC PNA+T+ + G +D ++F +
Sbjct: 331 IEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSA 390
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
PD T +L+ + KE + + + PN+
Sbjct: 391 EPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM 429
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 134/271 (49%), Gaps = 3/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKK 161
LI +YG+ G ++ ++ ++M +++++N ++ AC R L ++ + LF E+ +
Sbjct: 189 LINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEM-RH 247
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y LL + G D+A + M G+ TY+ ++ K G E+
Sbjct: 248 EGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEK 307
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EME +G D+++YNV I + G + ++ +M+ AG P+ +Y+ L+
Sbjct: 308 VAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLN 367
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K+ D+ ++++ ++E+ P+ATT+ I G F + +F + V + P
Sbjct: 368 LYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDP 427
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ T + LV K ++AK ++ + K
Sbjct: 428 NMETYEGLVFACGKGGLHEDAKKILFHMNGK 458
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 2/218 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G +K E+ +EM ++GV + +YT ++N
Sbjct: 134 LFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAY 193
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPD 271
+ G E + L M+++ V ++ YN I GD E L L EMR G++PD
Sbjct: 194 GRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPD 253
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L++ + DEA+ V++ + E G P TT+ + G +K + K
Sbjct: 254 LVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLK 313
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
E +PD ++ +L+E K IKEA V + ++
Sbjct: 314 EMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 120/269 (44%), Gaps = 2/269 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G+ D A F M E G + +++ ++ + +KV +L E+ +
Sbjct: 260 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 319
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD SY +L+++H GS +A+++ +M+ G TY+ +LN K G ++
Sbjct: 320 YL-PDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDV 378
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ +M++ + D YN+ I GG + + L ++ D + P+ +Y L+
Sbjct: 379 RELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFA 438
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
K + ++AKK+ + G P++ + I + +D+A F V
Sbjct: 439 CGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKST 498
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+T L+ + KE + ++ +++
Sbjct: 499 IDTYNSLIHTFARGGLYKEFEAILSRMRE 527
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 133/296 (44%), Gaps = 10/296 (3%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+D++ + P +S Y+ + + K R+ D+ L K
Sbjct: 342 EAMDVFKQMQAAGCVPNASTYS--ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNI 399
Query: 103 LIRSYGQAGMFDHAMRTF-DQMDELGTPRSVISFNALLFACTRSRLY-DKVPILFDEIPK 160
LIR +G+ G F + F D +DE P ++ ++ L+FAC + L+ D ILF K
Sbjct: 400 LIRVFGEGGYFKEVVTLFHDLVDENIDP-NMETYEGLVFACGKGGLHEDAKKILFHMNGK 458
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ P +Y L++++ + D+AL N M G + T TY ++++ + G +
Sbjct: 459 --GIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYK 516
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E E + S M + G+ + +++ I G E +K + EM + D + +
Sbjct: 517 EFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFV-EMEKMRCELDEQTLEGV 575
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ YC ++DE+K+ + ++ +G P+ + + +G +D A ++ E +
Sbjct: 576 LGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMI 631
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 119/254 (46%), Gaps = 12/254 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI +YGQA ++D A+ F+ M+E+G+ ++ ++N+L+ R LY + + + ++
Sbjct: 469 GLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRM-RE 527
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y +S + S+ +++ + SG ++A++ EME E+ T VL G +E
Sbjct: 528 YGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDE 587
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ + E++ G+ V Y + + G + EL+DEM +K S + ++
Sbjct: 588 SKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM----IKTRVSSIHQVIG 643
Query: 281 CYCKNEMMDEA-----KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
K + D++ + V++ L GC + T + L G +A +V E+
Sbjct: 644 QMIKGDYDDDSNWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATK 703
Query: 336 VHKIPD-FNTVKLL 348
P+ F KL+
Sbjct: 704 RGLFPELFRQSKLV 717
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L K ++ + + +ES P I+ L I ++ + G AM F QM G
Sbjct: 298 TFGKLGKLEKVAMLLKEMESEGYLPDISSYNVL---IEAHAKLGSIKEAMDVFKQMQAAG 354
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +++ LL + YD V LF ++ K+ + PD +Y +L++ + G +
Sbjct: 355 CVPNASTYSILLNLYGKHGRYDDVRELFLQM-KESSAEPDATTYNILIRVFGEGGYFKEV 413
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L +++ ++ ++ TY ++ K G E+A+++ M KG+ AY+ I
Sbjct: 414 VTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI-E 472
Query: 248 TYGGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YG + L+ + M + G K +YN L+ + + + E + + + E G S
Sbjct: 473 AYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISR 532
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKE 332
NA +F I SG +++A K F E
Sbjct: 533 NAKSFSGIIEGYRQSGQYEEAIKAFVE 559
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 116/251 (46%), Gaps = 6/251 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDE--LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+ + + G + ++R F M P I + ++ R L +K +FDE+
Sbjct: 118 VFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHI-YTIIISLLGREGLLEKCSEIFDEMAS 176
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN-CLYKQGNA 219
+ + SY L+ ++ +G + +LELL M+ + V +TY TV+N C +
Sbjct: 177 Q-GVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDW 235
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
E L++EM +GV D+ YN ++ G + + + M + G+ P+ +Y+++
Sbjct: 236 EGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYI 295
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K +++ + + +E G P+ +++ I G+ +A VFK+
Sbjct: 296 VETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGC 355
Query: 339 IPDFNTVKLLV 349
+P+ +T +L+
Sbjct: 356 VPNASTYSILL 366
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENK-GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+ L+ K G ++L L M+ + + YT +++ L ++G E+ ++ EM
Sbjct: 115 FSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEM 174
Query: 230 EKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+GV V +Y I N YG G E EL++ M+ + P+ ++YN ++ + ++
Sbjct: 175 ASQGVIRSVFSYTALI-NAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDL 233
Query: 288 MDEAK-KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
E ++ + G P+ T+ T + G D+A VFK + +P+ T
Sbjct: 234 DWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYS 293
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
+VE K K+++ +++ ++ + + P++
Sbjct: 294 YIVETFGKLGKLEKVAMLLKEMESEGYLPDI 324
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
D+M + ++++FN L+ R+ L+++V + ++ ++ +PD Y ++ C
Sbjct: 239 MDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGIC 297
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G + A E+LN M + G++ V Y TVL L +EAE L SEM +K LD
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+N+ + G +R+ EL+++M G PD I+Y ++ +CK ++DEA + + +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 299 E-----------------------------------ENGCSPNATTFRTWIYHLCGSGNF 323
+ GC PN TF T I LC G
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
++A ++ K+ ++ PD + +++GL K K +EA ++ + K PN +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 141/297 (47%), Gaps = 4/297 (1%)
Query: 68 TVRRLAKSKRFSDIETLI-ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
++ L ++R+ + E L+ E + D + + L+ + Q G+ D + +QM
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNI-LVDFFCQNGLVDRVIELLEQMLSH 385
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G VI++ ++ + L D+ +L + P+ +SY ++LK C +G
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-SSCGCKPNTVSYTIVLKGLCSAGRWVD 444
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A EL+++M +G VT+ T++N L K+G E+A L +M G D+ +Y+ I
Sbjct: 445 AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVID 504
Query: 247 NT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E EL++ M + G+ P+TI Y+ + + +++ ++++ +++
Sbjct: 505 GLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRS 564
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+A + I LC D+A F V +P+ +T +L++GL + KEA+
Sbjct: 565 DAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + G+ D A+ M G + +S+ +L C+ R D ++ I +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI--Q 454
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +++ L+ C G ++A+ELL +M G ++Y+TV++ L K G EE
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L + M KG+ + Y+ + + G ++ ++ D ++D ++ D + YN +++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK D A + + NGC PN +T+ I L G +A ++ E
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++NA++ R+ L +P + P+ ++ +++ C G ALE+L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
+EM KG Y +L + G + R+ M KG LD N+ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G + L+ ++ G + D +SYN ++ C + + +++ + + C+PN TF
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIK 369
T I +LC +G F++ ++V + PD +++G+ K+ ++ A ++ R
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 370 KKFPPNVL------------RAWKKVEEEL 387
PNV+ WK+ EE L
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 2/306 (0%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
L ++ A+ + + L++ D T LI S G+AG+ A+ F +
Sbjct: 156 LLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTF 215
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
S+NA+L + + Y + +++++ + SPD ++Y +LL ++ G D+
Sbjct: 216 NYRPFKHSYNAILNSLLGVKQYKLIEWVYEQMLED-GFSPDVLTYNILLWTNYRLGKMDR 274
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
L +EM G+ TY +L+ L K A + M++ G+DL V Y I
Sbjct: 275 FDRLFDEMARDGLSPDFYTYNILLHILGKGNKPLAALTTLNHMKEVGIDLSVLHYTTLID 334
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ G+ E K +DEM AG +PD + Y ++T Y + +++AK++++ + G P
Sbjct: 335 GLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQLP 394
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ + I LC +G F +A + KE P+F LV L K K+ EA+ VI
Sbjct: 395 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 454
Query: 366 RTIKKK 371
R + KK
Sbjct: 455 RDMVKK 460
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 98/273 (35%), Gaps = 71/273 (26%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT------------------------ 205
SY LL+K + G L++EM G T T
Sbjct: 153 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 212
Query: 206 -----------YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDP 253
Y +LN L + E ++ +M + G DV YN+ + TN G
Sbjct: 213 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYEQMLEDGFSPDVLTYNILLWTNYRLGKM 272
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCK-----------NEM--------------- 287
+R L DEM GL PD +YN L+ K N M
Sbjct: 273 DRFDRLFDEMARDGLSPDFYTYNILLHILGKGNKPLAALTTLNHMKEVGIDLSVLHYTTL 332
Query: 288 ---------MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
++ K + + + GC P+ + I SG +KA ++FKE + +
Sbjct: 333 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQ 392
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+P+ T ++ GL + +EA +++ ++ +
Sbjct: 393 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 425
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG + D+M + G V+ + ++ S +K +F E+ +
Sbjct: 332 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEG 391
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +Y +++ C +G +A LL EME++G V Y+T+++ L K G EA
Sbjct: 392 QL-PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEA 450
Query: 223 ERLWSEMEKKG 233
++ +M KKG
Sbjct: 451 RKVIRDMVKKG 461
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
D+M + ++++FN L+ R+ L+++V + ++ ++ +PD Y ++ C
Sbjct: 239 MDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM-SEHGCTPDIRMYATIIDGIC 297
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G + A E+LN M + G++ V Y TVL L +EAE L SEM +K LD
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+N+ + G +R+ EL+++M G PD I+Y ++ +CK ++DEA + + +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 299 E-----------------------------------ENGCSPNATTFRTWIYHLCGSGNF 323
+ GC PN TF T I LC G
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
++A ++ K+ ++ PD + +++GL K K +EA ++ + K PN +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + Q G+ D + +QM G VI++ ++ + L D+ +L +
Sbjct: 362 LVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM-SSC 420
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY ++LK C +G A EL+++M +G VT+ T++N L K+G E+A
Sbjct: 421 GCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 480
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M G D+ +Y+ I G E EL++ M + G+ P+TI Y+ +
Sbjct: 481 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACA 540
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +++ ++++ +++ +A + I LC D+A F V +P+
Sbjct: 541 LSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPN 600
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
+T +L++GL + KEA+
Sbjct: 601 ESTYTMLIKGLASEGLAKEAQ 621
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 4/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + + G+ D A+ M G + +S+ +L C+ R D ++ I +
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI--Q 454
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +++ L+ C G ++A+ELL +M G ++Y+TV++ L K G EE
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L + M KG+ + Y+ + + G ++ ++ D ++D ++ D + YN +++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK D A + + NGC PN +T+ I L G +A ++ E
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSE 626
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 18/270 (6%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++NA++ R+ L +P + P+ ++ +++ C G ALE+L
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-G 250
+EM KG Y +L + G + R+ M KG LD N+ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G + L+ ++ G + D +SYN ++ C + + +++ + + C+PN TF
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIK 369
T I +LC +G F++ ++V + PD +++G+ K+ ++ A ++ R
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS 314
Query: 370 KKFPPNVL------------RAWKKVEEEL 387
PNV+ WK+ EE L
Sbjct: 315 YGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 8/327 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ALD+ + + P S ++ + L+K + LI+ + PY
Sbjct: 254 QRALDLVPKMQERGCYP--SEVTFNVLINGLSKKGELQQAKGLIQEMAK-AGLRVSPYTY 310
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI Y + G+ A+ +++M G +V S N +++ C ++ D L D +
Sbjct: 311 NPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLK 370
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K NL PD ISY L+ C G+ +A LL+E+ + + VTY T+++ L + G+
Sbjct: 371 K--NLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
E A +L +M +G+ DV Y V + G+ KE DEM GL PD +Y
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ K +A K+ E + G P+ T+ ++ LC GN ++A ++ ++ +
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+PD T + ++ ++E + +
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIF 575
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+IS+N L++ R + IL DE+ + NLS + ++Y L+ C G + AL+L
Sbjct: 377 IISYNTLIYGFCRLGNIGEAFILLDELRFR-NLSFNIVTYNTLIDGLCRLGDLETALKLK 435
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN---- 247
+M N+G+ VTYT ++N K GN A+ + EM G+ D AY RI
Sbjct: 436 EDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKL 495
Query: 248 -----------------------TYG---------GDPERLKELIDEMRDAGLKPDTISY 275
TY G+ E EL+ +M G PD ++Y
Sbjct: 496 GDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTY 555
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
M + +N + E ++++ + G +P T+ I+ +G D A F E
Sbjct: 556 TSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQE 615
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPN 375
+P+ T +L+ G K +K+ +A K I +K PN
Sbjct: 616 KGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPN 656
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 11/295 (3%)
Query: 77 RFSDIETLIESHKN------DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPR 130
R D+ET ++ ++ P + L N G M A FD+M +G
Sbjct: 424 RLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM---AKEFFDEMLHVGLAP 480
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++ A + + K L +E+ K PD I+Y + + C G+ ++A EL
Sbjct: 481 DQFAYTARIVGELKLGDTAKAFKLQEEMLTK-GFPPDVITYNVFVNGLCKLGNLEEAGEL 539
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTY 249
L +M G VTYT+ ++ + G+ E ++ +M +G V Y V I +
Sbjct: 540 LQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHAL 599
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + EM++ G+ P+ I+YN L+ +CK MD+A K + ++E G PN T
Sbjct: 600 NGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYT 659
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
+ I C G + +A +++ + + PD T L++ L K K++ + +
Sbjct: 660 YTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQAVQFI 714
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+Y + P +Y +L S C G +AL+L+ +M+ +G + VT+ ++N L K+G +
Sbjct: 230 EYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQ 289
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A+ L EM K G+ + YN I G E L L +EM G+ P S+N +
Sbjct: 290 QAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALA-LWEEMVTRGVSPTVASHNTI 348
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M +CK M +A++ + + P+ ++ T IY C GN +A+ + E +
Sbjct: 349 MYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNL 408
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
+ T L++GL + ++ A
Sbjct: 409 SFNIVTYNTLIDGLCRLGDLETA 431
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD + +LK D KALE+ M G+ T TY T+L+ K G + A L
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M+++G +NV I + G+ ++ K LI EM AGL+ +YN L+ YCK
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
++ EA ++E + G SP + T +Y C G A + + + + +PD +
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379
Query: 345 VKLLVEGLVKKKKIKEA 361
L+ G + I EA
Sbjct: 380 YNTLIYGFCRLGNIGEA 396
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + A++ + M G V+++ L+ + FDE+
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM-LHV 476
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+PD+ +Y + G + KA +L EM KG +TY +N L K GN EEA
Sbjct: 477 GLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEA 536
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M + G D Y + + G +E+ +M G P ++Y L+
Sbjct: 537 GELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHA 596
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ N +D A + ++E G PN T+ I C D+A K F E P+
Sbjct: 597 HALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPN 656
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L+ K +EA
Sbjct: 657 KYTYTILINENCNMGKWQEA 676
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
MR+ L PD + N ++ ++ +A +VY + E G P TT+ T ++ C G
Sbjct: 194 MRNRFL-PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGE 252
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+A + + P T +L+ GL KK ++++AKG+I+ + K
Sbjct: 253 VQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAK 300
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 174/416 (41%), Gaps = 61/416 (14%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHY--ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN 90
SK+ S+ K D+ S+ H Y+ ++ + L + RF +++
Sbjct: 14 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM- 72
Query: 91 DPKITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
K EP + +LI + Q A+ +M+E+G V+ +N ++ + L
Sbjct: 73 --KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 130
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ LFD + + + D ++Y L+ C SG A L+ +M + + +T+T
Sbjct: 131 VNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 189
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDA 266
V++ K+G EA +L+ EM ++ VD DV YN I G + K+++D M
Sbjct: 190 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 249
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC----------------------- 303
G PD ++YN L+ +CK++ +DE K++ + + G
Sbjct: 250 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 309
Query: 304 ---------SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
PN T+ +Y LC + +KA +F+ D T +++ G+ K
Sbjct: 310 QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 369
Query: 355 KKKIKEAKGVIRTIK-KKFPPNVL------------RAWKKVE------EELGLVP 391
+++A + R++ K P+V+ R W K + +E GL+P
Sbjct: 370 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 5/199 (2%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + + +L S + D + L + ME G+ +Y V+NCL + A +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFLMTCY 282
+M K G + DV + I G+ R+ + ID +M + G +PD + YN ++
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGN--RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK ++++A ++++ +E +G +A T+ + + LC SG + A ++ ++ VM +P+
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185
Query: 343 NTVKLLVEGLVKKKKIKEA 361
T +++ VK+ K EA
Sbjct: 186 ITFTAVIDVFVKEGKFSEA 204
>gi|22128708|gb|AAM92820.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31432840|gb|AAP54427.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
Length = 517
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 9/283 (3%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
P LC LI +AG D + + G I+F LL C R D + I
Sbjct: 230 PDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDI 289
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVL 210
+ + + + PD S +LLK CD S +ALELL+ M + G V+YTTV+
Sbjct: 290 VLRRM-TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 348
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLK 269
N +K+G++++A + EM + + +V Y+ I ++ E+++ M G+
Sbjct: 349 NGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 408
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PD ++YN ++ YC + EA + + +G PN T+R+ + +LC +G +A K+
Sbjct: 409 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKI 468
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
F PD T + L++G K + E ++ + +F
Sbjct: 469 FDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMDPEF 511
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 118/282 (41%), Gaps = 15/282 (5%)
Query: 108 GQAGM--FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY--N 163
G+AG + A D++ G S+ SFN L R V LF+ + +
Sbjct: 169 GRAGGSGTEGARHVLDELPLRGWGASIYSFNRTLTDVARDSPAAAVS-LFNRMARAGADE 227
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA- 222
++PD +Y +L+ C +G D L + KG V +T+ +L L +A
Sbjct: 228 VTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAM 287
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEM------RDAGLKPDTISYN 276
+ + M + DV + + + D R +E ++ + R G PD +SY
Sbjct: 288 DIVLRRMTELSCMPDVFSCTILLKGLC--DENRSQEALELLHMMADDRGGGSPPDVVSYT 345
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ + K D+A Y + + SPN T+ + I LC + DKA +V V
Sbjct: 346 TVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 405
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+PD T ++ G + KEA G ++ ++ PNV+
Sbjct: 406 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 447
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 130/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ +G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ LL+E K + +A
Sbjct: 325 EAGHYGLLIEKFCKAGQYDKA 345
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YGLL++ C +G DK
Sbjct: 286 -LAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV-EVTTVTYTTVLNCLYKQGNAEE 221
NL P + L+ S +S+ AL+ +E + E T+ ++ L +
Sbjct: 5 NLVPS-FDHELVYNVLHSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNH 63
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + +M KKG++ D + V + ++YG G + ++ +M + G++ SYN L
Sbjct: 64 ARCILLDMPKKGLEWDEDMW-VMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALF 122
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ AK+ + + G P TF I+ SG + A + F++
Sbjct: 123 KVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREIS 182
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
PD T ++ G + KK++EA+ +K + P V+
Sbjct: 183 PDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 11/249 (4%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKAL----ELLNEMENKGVEV--TTVTYTTVLNCL 213
+K +P+ ++YG L+K C +G+ + AL E+LN+ GV +TY+ +++ L
Sbjct: 188 QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGL 247
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
K G +EA+ L+ EM+ +G+ DV +Y+ I G ++ K L DEM D G++PD
Sbjct: 248 CKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDM 307
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++++ L+ CK + EAKK+ E + + G PN T+ + I C G+ + A ++F
Sbjct: 308 VTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLS 367
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEELGLVP 391
PD + L+ G K K+KEA + ++ PNV ++ GL
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLK---GLFQ 424
Query: 392 APAVGDGQK 400
VGD +K
Sbjct: 425 KGKVGDAKK 433
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 138/276 (50%), Gaps = 13/276 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-------RLYDKVPILF 155
LI+ A R F +M +LG + +++ L+ ++ +L+ + +L
Sbjct: 167 LIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKE--MLN 224
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D N P I+Y +++ C G D+A EL EM+ +G+ ++Y+T+++
Sbjct: 225 DASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCC 284
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTIS 274
G ++++ L+ EM +GV D+ ++V I T G K+L++ M G+ P+ I+
Sbjct: 285 AGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLIT 344
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
YN L+ +C ++ A++++ + G P+ ++ T I C + +A ++ E +
Sbjct: 345 YNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEML 404
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAK---GVIRT 367
V K P+ T L++GL +K K+ +AK GV++T
Sbjct: 405 QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 9/271 (3%)
Query: 115 HAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
A FD M + SFN LL + Y ++ L++E+ + LSPD + +L
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM-RLAGLSPDLFTLSIL 132
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
C+ +AL + + +G VTYTT++ L + EA RL+ M+K G
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192
Query: 235 DLDVAAYNVRI-----TNTYGGDPERLKELIDEMRDAGL--KPDTISYNFLMTCYCKNEM 287
+ Y I T + KE++++ G+ KP I+Y+ ++ CK
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
DEAK+++E ++ G P+ ++ T I+ C +G +D++ +F E V PD T +
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSV 312
Query: 348 LVEGLVKKKKIKEAKGVIRT-IKKKFPPNVL 377
L++ L K+ K+ EAK ++ I++ PN++
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 136/307 (44%), Gaps = 41/307 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + G A + + M + G ++I++N+L+ + LF +P K
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK- 371
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD+ISY L+ +C + +A+ L NEM G TY T+L L+++G +A
Sbjct: 372 GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDA 431
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN------------------TY--------------- 249
++L+ M+ GV + Y + + +Y
Sbjct: 432 KKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDG 491
Query: 250 ---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E EL +++ GL+PD ++YN ++ +CK +D A ++E +EENGC+P+
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ T + C ++ K+ + V P+ + ++V+ L K +K K+ ++
Sbjct: 552 IIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL- 610
Query: 367 TIKKKFP 373
KFP
Sbjct: 611 ---PKFP 614
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 135/297 (45%), Gaps = 4/297 (1%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ + L K R + + L E K I LI + AG +D + FD+M +
Sbjct: 242 IIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ 301
Query: 127 GTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G +++F+ L+ C ++ + +L E+ + + P+ I+Y L+ C G +
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLL--EVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A EL M +KG+E ++YTT++N K +EA L++EM + G +V Y +
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419
Query: 246 TNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ G K+L M+ G+ ++ Y + CKN+ + EA +++ L+
Sbjct: 420 KGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFK 479
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
N + I LC +G + A+++F++ PD T +++ G K ++ A
Sbjct: 480 LNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNA 536
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 136/281 (48%), Gaps = 8/281 (2%)
Query: 56 ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP---YLCNLIRSYGQAGM 112
+ P S + ++ L + ++ + E + E N+ + + +P +I Y +AG
Sbjct: 204 SGPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGD 263
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
+ A + F QM E P S ++FN+L+ T Y +V ++D++ ++ + PD +SY
Sbjct: 264 YAQARKLFAQMSERKIPLSTVTFNSLMSFETD---YKEVSSIYDQM-QRAGMKPDVVSYS 319
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
LL+K++ + ++AL + EM + GV T +Y +L+ G +EA ++ M +
Sbjct: 320 LLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFKAMRRH 379
Query: 233 GVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V+ D+ +Y + D ++ ++D GLKP+ + Y LM Y K +++
Sbjct: 380 RVEPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKV 439
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+VYE + G PN T + T + + +F A FKE
Sbjct: 440 MRVYERMRIQGVEPNQTIYTTIMDAHGRNSDFGNAVIWFKE 480
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 9/280 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ +YG+ G F A R M++ G SVIS L+ A R + Y K +F + +
Sbjct: 146 LVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRM-QTS 204
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVLNCLYKQGNA 219
P ++Y ++LKS + +A + ++ N+ + + ++ K G+
Sbjct: 205 GPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDY 264
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L+++M ++ + L +N ++ + D + + + D+M+ AG+KPD +SY+ L+
Sbjct: 265 AQARKLFAQMSERKIPLSTVTFNSLMS--FETDYKEVSSIYDQMQRAGMKPDVVSYSLLI 322
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K +EA V+E + + G P ++ + SG D+A VFK ++ H++
Sbjct: 323 KAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTVFK-AMRRHRV 381
Query: 340 -PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
PD + +V V + A+ R IK PNV+
Sbjct: 382 EPDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVV 421
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 142/278 (51%), Gaps = 3/278 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++ +AG R +M+E G S++++N ++ R+ D+ L + KK
Sbjct: 241 HLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKK 300
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D +Y +L+ +A +L EM +KG++ V YT +++ +QG++ E
Sbjct: 301 -GLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGE 359
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R+ EM +GV L++ YN + GD E+ L++EM G+KPDT +YN ++
Sbjct: 360 AFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIE 419
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K + K + ++++ P A T I LC G+ + A +VF+ V + P
Sbjct: 420 GYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKP 479
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ L++G V++ + +EA +++ + KK P+VL
Sbjct: 480 NAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVL 517
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + Q G F A+R MD+ G V+ +N+++ +SR ++ E+ ++
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIER- 545
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV---------------------EV 201
L P+ +YG L+ +C SG A EM G+ E
Sbjct: 546 GLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEA 605
Query: 202 TTV--------------TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
T++ TY+ +++ L + G + A L SE +KG+ DV YN I+
Sbjct: 606 TSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISG 665
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G + +L + M G+ P+ I+YN L+ CK ++ A+++++G+ G + N
Sbjct: 666 FCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHN 725
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV-I 365
A T+ T I C SGN KA+++F E + PD L++G K+ ++A + +
Sbjct: 726 AVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFL 785
Query: 366 RTIKKKFP 373
+++K F
Sbjct: 786 ESVQKGFA 793
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 144/305 (47%), Gaps = 21/305 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I + + G A + + M + G ++I++NAL+ ++ ++ LFD IP K
Sbjct: 661 SIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGK 720
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L+ + ++Y ++ +C SG+ KA L +EM KGV + Y+ +++ K+GN E+
Sbjct: 721 -GLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEK 779
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
A L+ E +KG + + G +L+++M D +KPD ++Y L+
Sbjct: 780 ALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDY 839
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK + EA++ + +++ PNA T+ + +G + + +F E + PD
Sbjct: 840 HCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPD 899
Query: 342 FNTVKLLVEGLVK---------------KKKIKEAKGVIRTI-----KKKFPPNVLRAWK 381
T ++++ +K KK +K V + +K+ VL+ +
Sbjct: 900 GVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLE 959
Query: 382 KVEEE 386
K+EE+
Sbjct: 960 KIEEQ 964
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 3/320 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V+ + + + K KR ++ + ++E + LI + + G A R
Sbjct: 303 VADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFR 362
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
++M G ++ ++NAL+ + +K L +E+ + PD +Y +++ +
Sbjct: 363 VKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM-VGIKPDTQTYNNMIEGY 421
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
++ + +LL+EM+ + T T ++N L + G+ E+A R++ M GV +
Sbjct: 422 LKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNA 481
Query: 239 AAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y I + G + ++ M G++PD + YN ++ CK+ M+EAK
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ E G PN T+ I+ C SG A + FKE + P+ L++G K+
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601
Query: 358 IKEAKGVIR-TIKKKFPPNV 376
EA + R + + P+V
Sbjct: 602 TTEATSIFRCMLGRSVHPDV 621
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 39/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI Y ++G A R F +M G P V+ + C + I + +
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGR- 615
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ PD +Y L+ +G A+ELL+E KG+ TY ++++ KQG +
Sbjct: 616 -SVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGK 674
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L M +KG+ ++ YN I G+ ER +EL D + GL + ++Y ++
Sbjct: 675 AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIID 734
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV------ 334
YCK+ + +A ++++ + G P++ + I GN +KA +F ESV
Sbjct: 735 GYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS 794
Query: 335 --------------------------MV--HKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
MV H PD T +L++ K +KEA+
Sbjct: 795 TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854
Query: 367 TIKKK-FPPNVL 377
++K+ PN L
Sbjct: 855 DMQKRNLMPNAL 866
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 38/275 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y ++G A R FD+M G P ++AL+ C + +K LF E +K
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
S S L+ C SG +A +LL +M +K V+ VTYT +++ K G +EA
Sbjct: 792 FASTS--SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEA 849
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM-- 279
E+ + +M+K+ + + Y ++ G + L DEM ++PD ++++ ++
Sbjct: 850 EQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDA 909
Query: 280 ---------------------------TCY------CKNEMMDEAKKVYEGLEENGCSPN 306
C+ C+ E + E KV E +EE G + +
Sbjct: 910 HLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLS 969
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
T T + +G D A +V K V +PD
Sbjct: 970 LATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPD 1004
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDE 262
V + +++ K+G +EA + ++ G + + N +++ + E +
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M +A + D +Y L+ + + E K++ +EE GCSP+ T+ I LC +G
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
D+A+++ K + D T +L++G K+K+ EAK
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAK 326
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G+ A + +QM+ G + ++ N L + ++V E+ + +
Sbjct: 351 LIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMH 410
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SPD ++Y L+K++ G ALE++ EM KG+++ T+T T+L+ L K+ +EA
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEA 470
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
L K+G +D Y I + + E+ E+ DEM+ + P ++N L+
Sbjct: 471 HNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGG 530
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + + A + ++ L E+G P+ TF + I C G +KA++ + ES+ PD
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T +L+ GL K+ ++A T+
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTL 617
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 135/281 (48%), Gaps = 5/281 (1%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
+T L L+R Y + A FD M ++G V +FN L+ C +L D +
Sbjct: 167 LTCNTLLIGLVR-YPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALG 225
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+L + + ++N++PD ++Y +LK+ G +LL +M+ G+ VTY ++
Sbjct: 226 ML-ERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYG 284
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPD 271
K G+ +EA ++ M++ + D+ YN+ I G EL+D M+ L+PD
Sbjct: 285 YCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPD 344
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN L+ + + EAKK+ E +E +G PN T + LC ++ + K
Sbjct: 345 VVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVK 404
Query: 332 ESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
E V +H PD T L++ +K + A ++R + +K
Sbjct: 405 ELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 7/314 (2%)
Query: 51 VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQA 110
VS+ +P + Y + ++ ++K R SD++ L+ K + + NL+ Y +
Sbjct: 231 VSEFNVNPDNVTY--NTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKL 288
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G A + + M + + ++N L+ C + + + ++ ++ K L PD +
Sbjct: 289 GSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELM--DVMKSLKLQPDVV 346
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
+Y L+ + G S +A +L+ +MEN GV+ VT+ L L K+ EE R E+
Sbjct: 347 TYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKEL 406
Query: 230 -EKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
E G D+ Y+ I GD E++ EM G+K +TI+ N ++ CK
Sbjct: 407 VEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+DEA + + + G + T+ T I +KA++++ E + P T
Sbjct: 467 VDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNS 526
Query: 348 LVEGLVKKKKIKEA 361
L+ GL K + A
Sbjct: 527 LIGGLCHHGKTELA 540
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 136/281 (48%), Gaps = 12/281 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++++ + G M G + +++N L++ C L + I+ E+ K+
Sbjct: 246 ILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV--ELMKQ 303
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ PD +Y +L+ C++GS + LEL++ M++ ++ VTY T+++ ++ G + E
Sbjct: 304 TNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-----PERLKELIDEMRDAGLKPDTISYN 276
A++L +ME GV + +N+ + + ++KEL+ EM G PD ++Y+
Sbjct: 364 AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELV-EMH--GFSPDIVTYH 420
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ Y K + A ++ + + G N T T + LC D+A+ + +
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKR 480
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNV 376
I D T L+ G +++K+++A + +K+ K P V
Sbjct: 481 GYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTV 521
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA---EEA 222
P K + + L ++ +G AL++ +M ++ +T T+L L + ++ A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
++ +M K GV LDV +NV + N Y G + L L + + + PD ++YN ++
Sbjct: 189 REVFDDMVKIGVSLDVKTFNV-LVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTIL 247
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
K + + K + ++ NG PN T+ +Y C G+ +A+++ + + +
Sbjct: 248 KAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNIL 307
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
PD T +L+ G+ I+E ++ +K K P+V+
Sbjct: 308 PDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVV 346
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 131/311 (42%), Gaps = 43/311 (13%)
Query: 61 SRYAQDLTVRRLAKSKRFSDI----ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
++ +++++ L K ++ ++ + L+E H P I LI++Y + G A
Sbjct: 379 NQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYH---TLIKAYLKVGDLSGA 435
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
+ +M + G + I+ N +L A + R D+ L D K+ + D+++YG L+
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIV-DEVTYGTLIM 494
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
+ +KA E+ +EM+ + T T+ +++ L G E A + E+ + G+
Sbjct: 495 GYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 237 DVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD------------------------ 271
D +N I G E+ E +E KPD
Sbjct: 555 DDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 272 ----------TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
T++YN +++ +CK++ + EA + +EE P+ T+ + I L G
Sbjct: 615 NTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDG 674
Query: 322 NFDKAYKVFKE 332
+A ++ K+
Sbjct: 675 KLSEADELLKK 685
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 35/165 (21%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G + AM FD++ E G +FN+++ + +K ++E K
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNE-SIK 584
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKAL--------------------------------- 188
++ PD + +LL C G ++KAL
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEA 644
Query: 189 -ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+LL+EME K +E TY +++ L + G EA+ L + K
Sbjct: 645 YDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK 689
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 138/287 (48%), Gaps = 7/287 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + G A++ D+M V+++N +L C +L + + +L ++ ++
Sbjct: 186 LISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD I+Y +L+++ C +A++LL+EM +KG + VTY ++N + K+G +E
Sbjct: 243 --CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R + M G +V +N+ + + G ++ + EM G P +++N L+
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ ++ A V E + ++GC+PN+ ++ ++ LC ++A + V P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
D T L+ L K K+ A ++ + K VL + V + L
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL 467
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++RS G + A + +M G SV++FN L+ R L + + +++P+ +
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ-H 381
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ +SY LL + C ++A+E L+ M ++G VTY T+L L K G + A
Sbjct: 382 GCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 441
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +++ KG + YN I + G + +L+DEM+ GLKPD I+Y+ L+
Sbjct: 442 VEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGG 501
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ +DEA + LEE G PNA T+ + + LC + +A V P
Sbjct: 502 LSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPT 561
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+ +L+EGL + KEA
Sbjct: 562 ETSYMILIEGLAYEGLAKEA 581
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 6/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + AM+ D+M + G V+++N L+ C RL + + L + +P
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFL-NHMPS- 310
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ I++ ++L+S C +G A + L EM KG + VT+ ++N L ++G
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGR 370
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLM 279
A + +M + G + +YN + + D ER E +D M G PD ++YN L+
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYN-PLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLL 429
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
T CK+ +D A ++ L GCSP T+ T I L G D A K+ E
Sbjct: 430 TALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLK 489
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
PD T LV GL ++ K+ EA
Sbjct: 490 PDIITYSTLVGGLSREGKVDEA 511
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R+ +G AM D+ + VI++ L+ A + + L DE+ K
Sbjct: 218 ILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK- 276
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y +L+ C G D+A+ LN M + G + +T+ +L + G +A
Sbjct: 277 GCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDA 336
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ +EM +KG V +N+ I G R +++++M G P+++SYN L+
Sbjct: 337 EKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHA 396
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK++ M+ A + + + GC P+ T+ T + LC G D A ++ + P
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNVL 377
T +++GL K K +A ++ +K K P+++
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDII 493
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 10/280 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
N +R + G + + + M G +I+ +L+ C + + ++ EI +
Sbjct: 115 NHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVM--EILE 172
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
PD I+Y +L+ +C +G AL+LL+ M V VTY T+L L G +
Sbjct: 173 DSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLK 229
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFL 278
EA + ++ DV Y + I T G + +K L+DEMRD G KPD ++YN L
Sbjct: 230 EAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMK-LLDEMRDKGCKPDVVTYNVL 288
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +DEA + + GC PN T + +C +G + A K E +
Sbjct: 289 INGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGC 348
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
P T +L+ L +K I A V+ + + PN L
Sbjct: 349 SPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL 388
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 155/361 (42%), Gaps = 32/361 (8%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN---DPKITQEP 98
D+A+ + + + P + ++ +R + + R+ D E + P +
Sbjct: 299 DEAIRFLNHMPSYGCQP--NVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
L N + + G+ A+ ++M + G + +S+N LL A + + ++ I + +I
Sbjct: 357 ILINFL---CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERA-IEYLDI 412
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
PD ++Y LL + C G D A+E+LN++ +KG +TY TV++ L K G
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGK 472
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++A +L EM+ KG+ D+ Y+ + + G + ++ + G+KP+ I+YN
Sbjct: 473 TDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNS 532
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV--- 334
+M CK A + GC P T++ I L G +A ++ E
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
Query: 335 ---------MVHKIPDFNT------VKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRA 379
+V KIP FN + LL GL ++I G ++ P V
Sbjct: 593 VVKKSSAEQVVVKIP-FNVFYFYFLLHLLFNGLGSHREIFVGVGFFMILE---PNYVYHL 648
Query: 380 W 380
W
Sbjct: 649 W 649
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 174/416 (41%), Gaps = 61/416 (14%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHY--ASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKN 90
SK+ S+ K D+ S+ H Y+ ++ + L + RF +++
Sbjct: 73 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM- 131
Query: 91 DPKITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRL 147
K EP + +LI + Q A+ +M+E+G V+ +N ++ + L
Sbjct: 132 --KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 148 YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
+ LFD + + + D ++Y L+ C SG A L+ +M + + +T+T
Sbjct: 190 VNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDA 266
V++ K+G EA +L+ EM ++ VD DV YN I G + K+++D M
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC----------------------- 303
G PD ++YN L+ +CK++ +DE K++ + + G
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 304 ---------SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
PN T+ +Y LC + +KA +F+ D T +++ G+ K
Sbjct: 369 QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 355 KKKIKEAKGVIRTIK-KKFPPNVL------------RAWKKVE------EELGLVP 391
+++A + R++ K P+V+ R W K + +E GL+P
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 157/344 (45%), Gaps = 10/344 (2%)
Query: 36 RSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKIT 95
RS + ++ +D++ + + P +++ L+ ++AKSK + + +L H I
Sbjct: 45 RSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLS--KIAKSKNYDLVISLFH-HMEVCGIG 101
Query: 96 QEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
+ Y N+ I + F A+ +M + G V++ ++L+ C +R++D + +
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ ++ PD + Y ++ C G + A+EL + ME GV VTY +++ L
Sbjct: 162 V--SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDT 272
G +A RL +M + + +V + I G +L +EM + PD
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ C + +DEAK++ + + GC P+ T+ T I C S D+ K+F+E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNV 376
+ D T +++G + + A+ + + + PN+
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR--PNI 381
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 38/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S G D A++ +Q+ +VI++ L+ A D+ L DE+ +
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR- 257
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y +++ C G D+A E++ +E KG E ++Y +L L QG EE
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEG 317
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT-------------------------NTYGGDP---- 253
E+L ++M + D +V Y++ IT + Y DP
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 254 ----ERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
RL E ++ M G PD ++YN ++ CKN D+A +++ L E GCSPN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
++++ T L SG+ +A + E + PD T ++ L ++ + EA ++
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 367 TIKK-KFPPNVL 377
++ +F P+V+
Sbjct: 498 DMRSCEFHPSVV 509
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 12/311 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEP 98
D+A ++ ++ + P Y ++ +R L ++ + E L+ S K DP +
Sbjct: 280 DRAFEMVRNLELKGSEPDVISY--NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
L I + + G + AM M E G S++ L+ A C RL V I F E
Sbjct: 338 IL---ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL--DVAIEFLE 392
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
PD ++Y +L + C +G +D+ALE+ ++ G + +Y T+ + L+ G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+ A + EM G+D D YN I+ G + EL+ +MR P ++YN
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ +CK +++A V E + NGC PN TT+ I + +G +A ++ + V +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 337 HKIPDFNTVKL 347
I +++ +L
Sbjct: 573 DAISEYSFKRL 583
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 39/287 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA--------------------- 141
+IR + GM D A ++ G+ VIS+N LL A
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 142 ---------------CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
C ++ + + +L ++ K+ L+PD SY L+ + C G D
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLL--KLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+E L M + G V Y TVL L K G A++A ++ ++ + G + ++YN +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ GD R +I EM G+ PD I+YN +++C C+ M+DEA ++ + P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ T+ + C + + A V + V P+ T +L+EG+
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 81 IETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
+ET++ N I LC LI+ + A+R + +++ G P V ++NAL+
Sbjct: 112 LETMVRKGYNPDVI-----LCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFAYNALI 165
Query: 140 FA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
C +R+ D +L D + K + SPD ++Y +++ S C G D AL++LN++ +
Sbjct: 166 NGFCKMNRIDDATRVL-DRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE 258
+ T +TYT ++ +G +EA +L
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKL--------------------------------- 250
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+DEM GLKPD +YN ++ CK M+D A ++ LE G P+ ++ + L
Sbjct: 251 -MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALL 309
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
G +++ K+ + P+ T +L+ L + KI+EA +++ +K+K
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C SG+ ++L LL M KG + T ++ + N +A R+ +EK G DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 239 AAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
AYN I + + ++D MR PDT++YN ++ C +D A KV
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
L + C P T+ I G D+A K+ E + PD T ++ G+ K+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 358 IKEAKGVIRTIKKK 371
+ A ++R ++ K
Sbjct: 279 VDRAFEMVRNLELK 292
>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 502
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 8/267 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIR+Y QA F + + G S+ + NALL + + R+Y E+ K
Sbjct: 83 LIRTYVQARKLREGFEAFQLLRKRGFCVSINACNALLGSIVKVRVY------LSEMEAK- 135
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P +Y L+ C G + A +L++M G T+ VL +++ + EA
Sbjct: 136 GLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKEDVWEA 195
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
ER+++EM + GV D+ +++ I + G+ R ++M+ GL PDT+ Y L+
Sbjct: 196 ERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 255
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+N + A KV + E C + T+ T + LC D A ++FKE V PD
Sbjct: 256 YCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 315
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
F T+ L+ G K + +A + TI
Sbjct: 316 FYTLTTLIHGYCKDGNMTKALSLFETI 342
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 51/269 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + A++ ++M E V+++N LL R ++ D LF E+ ++
Sbjct: 252 LINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER- 310
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKAL----------------ELLNEMENKGVEVTTVTY 206
+ PD + L+ +C G+ KAL EL +M ++ + +++
Sbjct: 311 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISF 370
Query: 207 TTVLNCL--------------YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD 252
+ ++N + GN +A + M +GV D YN I
Sbjct: 371 SILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINR----- 425
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
L PD ++YN ++ + ++ M EA+ V + + G +P+ +T+ +
Sbjct: 426 ---------------LLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTS 470
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
I N +A++V E + +PD
Sbjct: 471 VINGYVSKDNMKEAFRVHDEMLQRGFVPD 499
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI+ Y +AG A + M G P I++N L+
Sbjct: 386 SLIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLI---------------------- 423
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD ++Y +L G +A +L++M +KG+ TYT+V+N + N +E
Sbjct: 424 NRLLPDLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKE 483
Query: 222 AERLWSEMEKKG 233
A R+ EM ++G
Sbjct: 484 AFRVHDEMLQRG 495
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ LL+E K + +A
Sbjct: 325 EAGHYGLLIENFCKAGQYDKA 345
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YGLL+++ C +G DK
Sbjct: 286 -LAPTDNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 41/350 (11%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDIET 83
I+ S + +++E D +K L ++ S ++ Y++ + + RL +F E
Sbjct: 12 QITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEG 71
Query: 84 LIESHKN-DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL---------------- 126
++E K D ++T++ +L + R YG+ A+R F +M++
Sbjct: 72 MLERMKQEDCEVTEDVFL-TICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDIL 130
Query: 127 -------------------GTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSP 166
G P +V+S N L+ A C + LF E+P + P
Sbjct: 131 VEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNR-GCQP 189
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
D +YG L+ C G +A ELL+EME KG+ + V+YT++++ L + N +EA L
Sbjct: 190 DSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELL 249
Query: 227 SEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
EM G++ +V Y+ + G + EL++ M L P+ ++Y+ L+ CK
Sbjct: 250 EEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKE 309
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
EA ++ + + G P+A + I LC + N+ +A E +
Sbjct: 310 GKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMAL 359
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A D+M+E G SV+S+ +L+ +S D+ L +E+
Sbjct: 197 LINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIIN- 255
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y L+ C SG S +A+ELL M + + VTY+T++N L K+G EA
Sbjct: 256 GIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREA 315
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNF---- 277
+ M +G+ D Y I+ + + IDEM G+ P+ S+ F
Sbjct: 316 VEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKM 375
Query: 278 ---LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
++ C N A ++Y + G S TF + C G+ +KA ++ +E +
Sbjct: 376 HNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMI 435
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKE-AKGVIRTIKKKF 372
+ IPD +L+ GL +KK++E + ++ +K+KF
Sbjct: 436 LDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKF 474
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 104/194 (53%), Gaps = 3/194 (1%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A+ + ++ME+ V+ T +Y TV + L ++ + + A + EM +KG+ V + N+ I
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIK 163
Query: 247 NTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ E L EM + G +PD+ +Y L+ CK + +AK++ + +EE G S
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ ++ + I+ LC S N D+A ++ +E ++ P+ T L++GL K +A +
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMEL 283
Query: 365 IRT-IKKKFPPNVL 377
+ ++++ PN++
Sbjct: 284 LEVMVRRRLLPNMV 297
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 149/336 (44%), Gaps = 8/336 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++A +++ + K SP Y + +R L R + L ES
Sbjct: 117 EEACNVFGDMFKLNVSP--DVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYH 174
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+++ ++G AG D A F QM + G +++N L+ A ++ ++ FD + K
Sbjct: 175 SVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKS 231
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + ++++Y LL S G +EL +M+ KG+ +TY ++ L G E+
Sbjct: 232 RSFT-NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVED 290
Query: 222 AERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+L+ EM + D+ N V + G E EL +M+ GL DT++YN L+
Sbjct: 291 VWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILIN 350
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ +D A + +EENGC+PN T+ T I N A ++F E P
Sbjct: 351 GLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAP 410
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
+ + L+EG K + A + R +K + PPN
Sbjct: 411 NVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPN 446
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 148/336 (44%), Gaps = 40/336 (11%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L ++R+ D++ L+ES + D LI YG+A M + A++T + G +
Sbjct: 5 LGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64
Query: 132 VISFNALLFACTRSR-------LYDK------VP------ILFDEIPK------------ 160
++++++ + +Y + VP IL D + K
Sbjct: 65 AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124
Query: 161 ---KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
K N+SPD +Y +L++S G D ++L M +G + TY +V++ G
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAG 184
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISY 275
+EA ++ +M +KG+ D YN+ I + +G G ER + + + R + ++Y
Sbjct: 185 RVDEACDIFQQMVQKGLQPDAVTYNILI-DAFGKTGQLERAFDFVGKSRSF---TNEVTY 240
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L++ + + +++ ++ G N T+ I L +G + ++++ E V
Sbjct: 241 NSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVD 300
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T+ +++ L K +++ A + + +K K
Sbjct: 301 NDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFK 336
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 8/256 (3%)
Query: 60 SSRYAQDLTVRRLAKS-KRFSDIETLIE---SHKNDPKITQEPYLCNLIRSYGQAGMFDH 115
S + ++T L S R DI+ L+E K ++ E LI G AG +
Sbjct: 231 SRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVED 290
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
+ + +M + +++ N +L +++ + LF ++ K L+ D ++Y +L+
Sbjct: 291 VWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFK-GLNADTVTYNILI 349
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+G D A LL EME G +TY T+++ K N A RL+ EM+++GV
Sbjct: 350 NGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVA 409
Query: 236 LDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+V +Y+ I +G G + L EM+ G P+ ++YN L+ C + A +
Sbjct: 410 PNVVSYSSLIEG-FGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAME 468
Query: 294 VYEGLEENGCSPNATT 309
+ + GC T
Sbjct: 469 YLREMRDAGCQMGKVT 484
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + + +M + G ++N L+ R D+ L++E K
Sbjct: 599 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC-KSR 657
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L P+ +YG+++ +C + ++ +L E+ + +E+ +V Y T++ + GN EA
Sbjct: 658 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEA 717
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M KG+ A Y+ I G E K LIDEMR GL P+ + Y L+
Sbjct: 718 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 777
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK MD+ V + + PN T+ I SG+ A K+ E V +PD
Sbjct: 778 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 837
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T +L G K+ KI+E K
Sbjct: 838 TVTYNVLTNGFCKEGKIEEGK 858
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R +M E G I++N L+ C + ++ L E+ K+
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ- 622
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y LL+ C G D+A+ L NE +++ + TY +++ K EE
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E+L++E+ + ++L+ YN +R G E K L D+MR G+ P T +Y+ L+
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK-LHDDMRSKGIPPTTATYSSLIH 741
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C M++AK + + + + G PN + I C G DK V +E P
Sbjct: 742 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHP 801
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ T ++++G K +K A ++ + K
Sbjct: 802 NKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 139/314 (44%), Gaps = 43/314 (13%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C R+ G F +A+ F + G +V + LL + ++ +K +F+ +
Sbjct: 252 CTQFRNVG----FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-- 305
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ +SPD + + + C G + A++L +ME GV VTY +++ L K GN +
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY------------------GGDPERL--KELI 260
EA R +M K GV+ + Y+V I G P + LI
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425
Query: 261 D----------------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
D +M G+ P++++ N ++ +CK M++A+ + E + G S
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
N F T I+ LC + F+ A + +E ++ + P+ + LV GL K+ K +A +
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545
Query: 365 -IRTIKKKFPPNVL 377
R ++K F N++
Sbjct: 546 WFRLLEKGFGANLV 559
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 135/312 (43%), Gaps = 38/312 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI + G D A R ++M + G ++I+++ L+ + +++ + E +K
Sbjct: 353 NLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEK 412
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P+++ Y L+ +C G+ AL + +M +KG+ +VT +++ K G E+
Sbjct: 413 -GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 471
Query: 222 AERLWSEMEKKGVDLDVAAY--------------------------NVR-----ITNTYG 250
AE + EM +G ++ A+ N+R +T G
Sbjct: 472 AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 531
Query: 251 GDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + K EL + + G + ++ N L+ CK M EA ++ + + E G
Sbjct: 532 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 591
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I C G ++ +K+ E V PD T LL+ G+ + K+ EA +
Sbjct: 592 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 651
Query: 366 RTIKKK-FPPNV 376
K + PNV
Sbjct: 652 NECKSRDLVPNV 663
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 134/296 (45%), Gaps = 4/296 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L K ++F++ ++++ E LI Y + G A+R M G
Sbjct: 390 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 449
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++ N+++ C ++ IL + + + ++++P ++ ++ C + + A
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLCMNSRFESA 507
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L L EM + + TT++ L K+G +A LW + +KG ++ N I
Sbjct: 508 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 567
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G+ + L+ +M + G D I+YN L++ CK ++E K+ + + G P+
Sbjct: 568 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 627
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
T+ I+ +C G D+A ++ E +P+ T ++++G K KI+E +
Sbjct: 628 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 114/233 (48%), Gaps = 2/233 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A+ +++ +V ++ ++ ++ ++ LF E+ +
Sbjct: 634 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ- 692
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL + + Y L++++C +G++ +A +L ++M +KG+ TT TY+++++ + G E+A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L EM K+G+ +V Y I G +++ ++ EM + P+ I+Y ++
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 812
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y K+ M A K+ + G P+ T+ C G ++ + ++ V
Sbjct: 813 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGV 865
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 146 RLYD-KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
RL D K+P+LF + PK H + S A+ LNE+ GV V V
Sbjct: 204 RLIDRKLPVLFGD-PKN---------------RHIEIAS---AMADLNEVGESGVAVAAV 244
Query: 205 TYTTVLNCL-YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEM 263
+ C ++ A ++ + KGV V +++ + + E
Sbjct: 245 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFET 304
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
G+ PD ++ + +CK +++A +++ +E+ G SPN T+ I+ LC GN
Sbjct: 305 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 364
Query: 324 DKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
D+A++ FKE ++ + T +L+ GL+K +K EA V++ T++K F PN
Sbjct: 365 DEAFR-FKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 417
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G + A D+M + G +V+ + AL+ + DKV + E+
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM-SS 796
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y++ P+KI+Y +++ + SG A +LL+EM KG+ TVTY + N K+G EE
Sbjct: 797 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 856
Query: 222 AERL 225
+ L
Sbjct: 857 GKLL 860
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ LL+E K + +A
Sbjct: 325 EAGHYGLLIENFCKAGQYDKA 345
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YGLL+++ C +G DK
Sbjct: 286 -LAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 132/313 (42%), Gaps = 51/313 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +G + A R F+ M V+++N ++ R + ++ F E+ K
Sbjct: 156 MIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGR 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL------------ 210
N+ P ++Y L+K + D AL L+ EM+ G++ +TY+T+L
Sbjct: 215 NIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEA 274
Query: 211 ----------------NCLY--------KQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
N ++ K GN + A + M + V + Y + I
Sbjct: 275 RVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIE 334
Query: 247 N-TYGGDPERLKELIDEM--RDAGLKPDTI------SYNFLMTCYCKNEMMDEAKKVYEG 297
N G ++ +L+D++ +D L+P + +YN ++ C N +A+ +
Sbjct: 335 NFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQ 394
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF--NTVKLLVEGLVKK 355
L + G + T T I G+ D A+++ K +M+ + D + LLV+ +KK
Sbjct: 395 LMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLK--IMLRRKVDSEKSAYNLLVQSYLKK 451
Query: 356 KKIKEAKGVIRTI 368
+ +AK + ++
Sbjct: 452 NEPXDAKAALDSM 464
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 117/232 (50%), Gaps = 3/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G+A ++ R F +M+E G R +++N L+ R L + + K
Sbjct: 230 LISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSS 289
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P I+Y ++ + G + +A+ L EM N+ VE + Y T+++ + GN +EA
Sbjct: 290 GIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEA 349
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ ME+ G D+ YN + ++YG G L++EM+ G P+ ++Y+ L+
Sbjct: 350 HSIRRAMEEAGFAKDIVTYNA-LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALID 408
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
YCK+ +A +++ +++ G P+ + T + C +G+ D+A + +E
Sbjct: 409 AYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEE 460
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 4/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A+R F +M E G I+FN L+ A R+ +++ +F E+ ++
Sbjct: 195 VIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEER- 253
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ D ++Y L+ ++C G L+ M ++ G+E + +TY+T+++ K G A E
Sbjct: 254 GIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHE 313
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM + V+ D YN + + G+ + + M +AG D ++YN L+
Sbjct: 314 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 373
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K EA + E +++ G SPN T+ I C G A +F++ P
Sbjct: 374 SYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQP 433
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D LV+G K EA ++ + PNV+
Sbjct: 434 DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVI 471
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S G+ G D A FD+ G +V +++L+ A RS K +F+ + K
Sbjct: 126 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM--KV 183
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ + Y ++ + G AL + EM +G+ +T+ T+++ + EE
Sbjct: 184 VCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEEC 243
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEM-RDAGLKPDTISYNFLMT 280
+R+++EME++G+ D YN I T GG L++ M + +G++P I+Y+ ++
Sbjct: 244 DRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMID 303
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K + EA +++ + P+ + T + GNFD+A+ + +
Sbjct: 304 GYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAK 363
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D T L++ K+ K +EA ++ +K++ PN+L
Sbjct: 364 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 401
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G FD A M+E G + ++++NALL + + + + L +E+ K+
Sbjct: 336 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEM-KQR 394
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ ++Y L+ ++C G A+ L +++ G++ V Y+T+++ K G+ +EA
Sbjct: 395 GASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEA 454
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR-------DAGLKPDTI-S 274
L EM G+ +V YN + + YG +++ ++R LKP
Sbjct: 455 LALLEEMADNGIRPNVITYN-SLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDD 513
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG-------SGNFDKAY 327
L+ K ++ A +V+ + +NG PN TF + I + C + N +A
Sbjct: 514 QQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSS-ILNACSHCASVEDASNLLEAM 572
Query: 328 KVFKESV 334
+VF V
Sbjct: 573 RVFDGRV 579
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 117/232 (50%), Gaps = 3/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G+A ++ R F +M+E G R +++N L+ R L + + K
Sbjct: 231 LISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSS 290
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P I+Y ++ + G + +A+ L EM N+ VE + Y T+++ + GN +EA
Sbjct: 291 GIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEA 350
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ ME+ G D+ YN + ++YG G L++EM+ G P+ ++Y+ L+
Sbjct: 351 HSIRRAMEEAGFAKDIVTYNA-LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALID 409
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
YCK+ +A +++ +++ G P+ + T + C +G+ D+A + +E
Sbjct: 410 AYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEE 461
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 4/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A+R F +M E G I+FN L+ A R+ +++ +F E+ ++
Sbjct: 196 VIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEER- 254
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ D ++Y L+ ++C G L+ M ++ G+E + +TY+T+++ K G A E
Sbjct: 255 GIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHE 314
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM + V+ D YN + + G+ + + M +AG D ++YN L+
Sbjct: 315 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 374
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K EA + E +++ G SPN T+ I C G A +F++ P
Sbjct: 375 SYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQP 434
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D LV+G K EA ++ + PNV+
Sbjct: 435 DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVI 472
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I S G+ G D A FD+ G +V +++L+ A RS K +F+ + K
Sbjct: 127 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM--KV 184
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ + Y ++ + G AL + EM +G+ +T+ T+++ + EE
Sbjct: 185 VCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEEC 244
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEM-RDAGLKPDTISYNFLMT 280
+R+++EME++G+ D YN I T GG L++ M + +G++P I+Y+ ++
Sbjct: 245 DRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMID 304
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y K + EA +++ + P+ + T + GNFD+A+ + +
Sbjct: 305 GYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAK 364
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
D T L++ K+ K +EA ++ +K++ PN+L
Sbjct: 365 DIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNIL 402
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G FD A M+E G + ++++NALL + + + + L +E+ K+
Sbjct: 337 MVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEM-KQR 395
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ ++Y L+ ++C G A+ L +++ G++ V Y+T+++ K G+ +EA
Sbjct: 396 GASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEA 455
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMR-------DAGLKPDTISY 275
L EM G+ +V YN + + YG +++ ++R LKP ++ Y
Sbjct: 456 LALLEEMADNGIRPNVITYN-SLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKP-SVDY 513
Query: 276 N--FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ L+ K ++ A +V+ + +NG PN TF +
Sbjct: 514 DQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSS 552
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 8/241 (3%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G A F + G P S+ + NA L A R+ D +FDE+ + N++ ++ S
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y ++K+ C +G D E+L E+ G++ T VTY +++ L K G EEA RL ME
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+ G+ V + + I G ER E ++ EM G+ P+ + YN L+ +C+
Sbjct: 284 QGGMTPSVVTFGILINGLARG--ERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 341
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV---MVHKIPDFNT 344
+A ++++ + P A T+ LC G ++A ++ ++ + M FNT
Sbjct: 342 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 401
Query: 345 V 345
V
Sbjct: 402 V 402
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 113/249 (45%), Gaps = 4/249 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+IR + + A++ M G + +FN LL A C ++ + +L D++ K
Sbjct: 508 MIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLL-DQM-KT 565
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +SYG ++ HC + KA E L E+ ++G++ Y ++ + G+
Sbjct: 566 EGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISG 625
Query: 222 AERLWSEMEKKGVD-LDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A M+ G+ +V ++ + G E K + + R+ + I Y ++
Sbjct: 626 AIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQ 685
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK M EA +E + G SPN T+ T +Y SGN ++A K+F E V IP
Sbjct: 686 GYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIP 745
Query: 341 DFNTVKLLV 349
D T L+
Sbjct: 746 DNITYGTLI 754
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 134/315 (42%), Gaps = 43/315 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + F +M++LG + + +N L+ R + LFDE+ K
Sbjct: 297 LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLK- 355
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY-------- 214
+ P ++Y L+ K+ C G ++A +L +M + G+ V + TV+ L
Sbjct: 356 KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLES 415
Query: 215 ----------------------------KQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
K G +EA +W + KG+ +++A N I
Sbjct: 416 VVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIH 475
Query: 247 NTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G + +KE +I M + G++ D+I+YN ++ CK+ M+EA K++ + G
Sbjct: 476 GLCEG--KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGF 533
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+ TF T ++ C G ++ + + + PD + +++G K K I++AK
Sbjct: 534 KPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKE 593
Query: 364 VI-RTIKKKFPPNVL 377
+ + + PNV
Sbjct: 594 YLTELMDRGLKPNVF 608
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 79 SDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
S +E I+ H + + +P L L+ +Y G + DQM G ++S+
Sbjct: 516 SKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSY 575
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
++ +++ K E+ + L P+ Y L+ + +G A++ + M+
Sbjct: 576 GTIIDGHCKAKDIRKAKEYLTELMDR-GLKPNVFIYNALIGGYGRNGDISGAIDAVETMK 634
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPE 254
+ G++ T VTY +++ + G EEA+ ++S+ + VDL V Y + I G
Sbjct: 635 SNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMV 694
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+EMR G+ P+ ++Y LM Y K+ +EA K+++ + +G P+ T+ T I
Sbjct: 695 EAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754
Query: 315 YHLCGSGNFDK 325
+ DK
Sbjct: 755 ARCSEVNSLDK 765
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 6/280 (2%)
Query: 102 NLI-RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIP 159
NLI ++ + G + A R + M +G FN ++ + R+R + V + +E+
Sbjct: 365 NLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMV 424
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + P+ ++ C G +A+ + + NKG+ V T +++ L +
Sbjct: 425 TR-GMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYM 483
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA ++ M KG++LD YN+ I E +L +M G KPD ++N L
Sbjct: 484 KEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTL 543
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YC M+E + + ++ G P+ ++ T I C + + KA + E +
Sbjct: 544 LHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGL 603
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF--PPNV 376
P+ L+ G + I A + T+K P NV
Sbjct: 604 KPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNV 643
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 251 GDPERLKELIDEMRDA-GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + +E+ DEMR++ + + SY ++ CK +D ++ L G P T
Sbjct: 199 GQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVT 258
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ + LC SG ++A+++ P T +L+ GL + ++ E V++ ++
Sbjct: 259 YNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEME 318
Query: 370 K-KFPPN 375
+ PN
Sbjct: 319 QLGVSPN 325
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D A T+ +M + G V+++N+++ A +++ DK + + + K
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN- 260
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +L +C SG +A+ L +M + GVE VTY+ +++ L K G EA
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M K+G+ ++ Y + T G E + L+D M G+ PD ++ L+
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE-MHGLLDLMVRNGIHPDHYVFSILIC 379
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y +D+A V+ + + G +PNA T+ I LC SG + A F++ + P
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
L+ GL K + A+ +I
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELI 464
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 37/261 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
LI +Y G D AM F +M + G + +++ A++ C R+ D +L+ E
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVED--AMLYFEQMID 434
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
LSP I Y L+ C ++A EL+ EM ++G+ + T+ + ++++ K+G E
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+E+L+ M VRI G+KP+ I+YN L+
Sbjct: 495 SEKLFELM-------------VRI---------------------GVKPNVITYNTLING 520
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC MDEA K+ G+ G PN T+ T I C + A +FKE PD
Sbjct: 521 YCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPD 580
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T ++++GL + ++ AK
Sbjct: 581 IITYNIILQGLFQTRRTAAAK 601
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 42/281 (14%)
Query: 98 PYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI 153
P LC LI +AG D + + G I+F LL C R D + I
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVTYTTVL 210
+ + + P+ SY +LLK CD S +ALELL+ M + G V+YTTV+
Sbjct: 145 VLRRMTE-LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVI 203
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKP 270
N +K+G++++A +TY EM D G+ P
Sbjct: 204 NGFFKEGDSDKA-----------------------YSTY-----------HEMLDRGILP 229
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D ++YN ++ CK + MD+A +V + +NG P+ T+ + ++ C SG +A
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFL 289
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
K+ PD T LL++ L K + EA+ + ++ K+
Sbjct: 290 KKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 135/308 (43%), Gaps = 10/308 (3%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L ++ E LI + + ++I S+ + G + + F+ M +G
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+VI++N L+ C ++ + + +L + L P+ ++Y L+ +C + A
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMV--SVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L L EME+ GV +TY +L L++ A+ L+ + + G ++++ YN+ +
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL-- 623
Query: 248 TYGGDPERLK----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
+G +L ++ + LK + ++N ++ K DEAK ++ NG
Sbjct: 624 -HGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN T+R ++ G G ++ ++F D + +V L+++ +I A
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGT 742
Query: 364 VIRTIKKK 371
+ I +K
Sbjct: 743 YLSMIDEK 750
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 40/267 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y AG D AM+ M +G + ++++ L+ C SR+ D + +LF E+
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL-VLFKEMESS 575
Query: 162 YNLSPDKISYGLLLKSH-----------------------------------CDSGSSDK 186
+SPD I+Y ++L+ C + +D
Sbjct: 576 -GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL++ + +++ T+ +++ L K G +EA+ L+ G+ + Y +
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
N G G E L +L M D G D+ NF++ + + A ++E S
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKE 332
A+T +I L G G + + Y+ E
Sbjct: 755 EASTASLFIDLLSG-GKYQEYYRFLPE 780
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 138/305 (45%), Gaps = 37/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+S+G+ GM + + + +M E G ++ ++N L+ + D +F E+ +
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESG 251
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y ++K +C +G + KA+E L +ME +G E +TY T++ Y +
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 223 ERLWSEMEKKGVDL-----------------------------------DVAAYNVRITN 247
L+ EM++KG+ + +VA Y V I
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E L+ M D G KPD ++Y+ ++ CKN ++EA + +G + N
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ + + I L +G D+A ++F+E D L++ K +K+ EA + +
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 367 TIKKK 371
++++
Sbjct: 492 RMEEE 496
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 6/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
+I + G + F+ M G+ +V + L+ +S + D + +L I +
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +++ C +G ++AL+ + G+ + ++ Y+++++ L K G +E
Sbjct: 393 FK--PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEM-RDAGLKPDTISYNFLM 279
AERL+ EM +KG D YN I T + L M + G +Y L+
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K +EA K+++ + + G +P A FR LC SG +A K+ E + I
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
D + ++ L K +IKEA
Sbjct: 571 LD-AACEDMINTLCKAGRIKEA 591
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D++ + EI KK+ + L+KS G ++ L + +M+ G+E T TY
Sbjct: 169 DRIRFVSSEI-KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG 267
++N L + AER++ ME + D+ YN I G ++ E + +M G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 268 LKPDTISY-NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ D I+Y + CY ++ +Y+ ++E G F I LC G ++
Sbjct: 288 HEADKITYMTMIQACYADSD-FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 346
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
Y VF+ + P+ +L++G K +++A ++ R I + F P+V+
Sbjct: 347 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ V L K+ R + + + D + +LI G+AG D A R F++M E
Sbjct: 402 VVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 461
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G R +NAL+ A T+ R D+ LF + ++ +Y +LL +++
Sbjct: 462 GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEE 521
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL+L + M +KG+ T + + L G A ++ E+ GV LD A ++ T
Sbjct: 522 ALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINT 581
Query: 247 NTYGGDPERLKELIDEMRDAG 267
G + +L D + + G
Sbjct: 582 LCKAGRIKEACKLADGITERG 602
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 19/352 (5%)
Query: 28 VSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES 87
VS A S L LD+Y+ S A + RY + + V + +E
Sbjct: 14 VSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKK------------MEE 61
Query: 88 HKNDPKITQEPYLCNLIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
P + + N+ YG+ GM ++ F+ M G ++N L+ C R
Sbjct: 62 EGCKPTLITYNVILNV---YGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGS 118
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
L+++ +F ++ K PDK++Y LL + S + +A+E+L EME G + VTY
Sbjct: 119 LHEEAAAVFKDM-KSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTY 177
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRD 265
++++ + G +EA L ++M + G++LDV Y ++ G E + EMR
Sbjct: 178 NSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRA 237
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
AG KP+ ++N L+ + E KV+E ++ + C P+ T+ T + +G +
Sbjct: 238 AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSE 297
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
VFKE +P+ +T L+ + +A + R ++ P++
Sbjct: 298 VSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDL 349
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 38/315 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +Y + G FD AM + +M E G + ++NA+L A R L+++ +F E+ K
Sbjct: 320 LISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEM-KDG 378
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P++++Y LL ++ + + L L E+ + +E V T++ K EA
Sbjct: 379 RCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEA 438
Query: 223 ERLWSEMEKKGVDLDVAAYNVRIT------------------NTYGGDP----------- 253
E + E+++KG D++ N ++ N G P
Sbjct: 439 EVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYM 498
Query: 254 -------ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
ER +E++ E+ G+KPDTISYN ++ YC+N M EA +++ + E+G P+
Sbjct: 499 HSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPD 558
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T+ T++ F+ A V + + P+ NT +V+G K +A I
Sbjct: 559 VITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMFIS 618
Query: 367 TIKKKFPPNVLRAWK 381
++ + P++ R K
Sbjct: 619 SL-HELDPHISREEK 632
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 105/215 (48%), Gaps = 2/215 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +Y + G+ AM +QM E G V ++ LL R+ + +F E+ +
Sbjct: 179 SLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEM-RA 237
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ ++ L+K H + G + +++ E++N VT+ T+L + G E
Sbjct: 238 AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSE 297
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ EM++ G + YN I+ + G ++ ++ M +AG+ PD +YN ++
Sbjct: 298 VSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLA 357
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+ + ++++K++ +++ C PN T+ + ++
Sbjct: 358 ALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLH 392
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G A LLN++ G + YT+++ G EA ++ +ME++G + Y
Sbjct: 12 GKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITY 71
Query: 242 NVRITNTYG--GDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
NV I N YG G P ++K L + M++AG+ PD +YN L+TC + + +EA V++ +
Sbjct: 72 NV-ILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDM 130
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
+ G P+ T+ + S +A +V +E + P T L+ + +
Sbjct: 131 KSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLL 190
Query: 359 KEA 361
KEA
Sbjct: 191 KEA 193
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI-DEMRDA 266
+++ L K+G A L +++ K G LDV AY IT R ++ +M +
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 267 GLKPDTISYNFLMTCYCKNEM-MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF-D 324
G KP I+YN ++ Y K M ++ K ++EG++ G P+ T+ T I C G+ +
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLI-TCCRRGSLHE 121
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+A VFK+ + +PD T L++ K ++ KEA V+R ++
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREME 166
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 18/314 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++AL++ + P Y + +R L KS R D + ++ D +
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTE--LIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP----ILFDE 157
NLI G++ A+ F++M L +V+++N ++ +S DK P + E
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTII----KSLFEDKAPPSEASSWLE 396
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
KK + P +Y +L+ C + +KAL LL EM+ KG Y +++N L K
Sbjct: 397 RMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAK 456
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTIS 274
E A L+ E+++ V Y V I + G R E L +EM+ G PD +
Sbjct: 457 RYEAANELFQELKENCGSSSVRVYAVMIK--HFGKCGRFNEAMGLFNEMKKLGCIPDVYA 514
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---K 331
YN L+T + +MMDEA ++ +EENGC+P+ + + L +G +A ++F K
Sbjct: 515 YNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMK 574
Query: 332 ESVMVHKIPDFNTV 345
S + +NTV
Sbjct: 575 SSTIKPDAVSYNTV 588
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL + + + P + Y + L K+KR+ L + K + +
Sbjct: 424 EKALLLLEEMDEKGFPPCPAAYCS--LINSLGKAKRYEAANELFQELKENCGSSSVRVYA 481
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ +G+ G F+ AM F++M +LG V ++NAL+ R+ + D+ LF + +
Sbjct: 482 VMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEEN 541
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD S+ ++L +G +A+E+ +M++ ++ V+Y TVL CL + G EE
Sbjct: 542 -GCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEE 600
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A +L EM KG + D+ Y+
Sbjct: 601 ATKLMKEMNSKGFEYDLITYS 621
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 145/322 (45%), Gaps = 29/322 (9%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+R L +++ ++ I+ P L +++ G+ M + A+ F Q+
Sbjct: 132 IRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKC 191
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+ ++N+++ + ++KV L++E+ + + PD ++Y L+ + D A+
Sbjct: 192 RPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAV 251
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY------- 241
L +EM+ G++ T YTT++ +K G EEA L EM + V Y
Sbjct: 252 RLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGL 311
Query: 242 --NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ R+ + YG LK+ G KPD + N L+ +++ + EA +++E +
Sbjct: 312 GKSGRVEDAYGVYKNMLKD--------GCKPDVVLMNNLINILGRSDRLKEAVELFEEMR 363
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK------IPDFNTVKLLVEGLV 353
C+PN T+ T I L F+ + S + + +P T +L++G
Sbjct: 364 LLNCTPNVVTYNTIIKSL-----FEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFC 418
Query: 354 KKKKIKEAKGVIRTIKKK-FPP 374
K ++++A ++ + +K FPP
Sbjct: 419 KTNRVEKALLLLEEMDEKGFPP 440
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F E+ ++ L PD Y +++ +C G +KA + L EM G+ + TYT ++N
Sbjct: 379 FQEM-SEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACC 437
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDT 272
K G+ AE L M +G+ DV +N I + +G G ++ EL+D MR AG+ PDT
Sbjct: 438 KSGDMAMAEYLLQRMMLEGLIPDVVTFNCLI-DGFGKKGYLQKAFELLDIMRSAGMSPDT 496
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++YN L+ +EAK + L G SP+ TF I GNF++A+ V+
Sbjct: 497 VTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSY 556
Query: 333 SVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
H PD T L+ G + +++ EA + ++ + P+++
Sbjct: 557 MSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLV 602
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 2/254 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y + G + A + +M + G SV ++ L+ AC +S L + +
Sbjct: 397 IIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLE- 455
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +++ L+ G KA ELL+ M + G+ TVTY +++ L +G EA
Sbjct: 456 GLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEA 515
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + E+ ++G+ DV + I + G+ E + M + +KPD ++ + L+
Sbjct: 516 KDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNG 575
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+ MDEA ++ + + G P+ + I+ C +GN + A + + +P+
Sbjct: 576 YCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPN 635
Query: 342 FNTVKLLVEGLVKK 355
T + G KK
Sbjct: 636 ITTHRAFALGFEKK 649
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 9/225 (4%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
P +T L N G M ++ ++ +M G V++FN L+ + K
Sbjct: 424 PSVTTYTLLINACCKSGDMAMAEYLLQ---RMMLEGLIPDVVTFNCLIDGFGKKGYLQKA 480
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
L D I + +SPD ++Y L+ S G ++A ++L+E+ +G+ +T+T V++
Sbjct: 481 FELLD-IMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVID 539
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGL 268
K+GN EEA +WS M ++ V DV + + N Y R+ E L +M DAGL
Sbjct: 540 GFSKKGNFEEAFLVWSYMSERHVKPDVVTCSA-LLNGY-CRARRMDEANALFLKMLDAGL 597
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
KPD + YN L+ +C M+ A + + ++G PN TT R +
Sbjct: 598 KPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAF 642
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 3/263 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A +TF +M E G + ++ + +K E+ K + ++P +Y LL+
Sbjct: 375 ASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLK-FGITPSVTTYTLLI 433
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C SG A LL M +G+ VT+ +++ K+G ++A L M G+
Sbjct: 434 NACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMS 493
Query: 236 LDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D YN I + G P K+++ E+ GL PD +++ ++ + K +EA V
Sbjct: 494 PDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLV 553
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + E P+ T + C + D+A +F + + PD L+ G
Sbjct: 554 WSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCS 613
Query: 355 KKKIKEAKGVI-RTIKKKFPPNV 376
+ A ++ I F PN+
Sbjct: 614 AGNMNAACNLVAMMIDDGFLPNI 636
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 10/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
I SY G + +M G VI++ ++ A C S + +LF I
Sbjct: 260 FIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMI--H 317
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S D +S ++ +C G SDKA+ LLN V Y++ + L K GN E
Sbjct: 318 CGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFN---VRPNIFVYSSFMTKLCKDGNMLE 374
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + + EM + G+ D Y + I Y GD + + + EM G+ P +Y L+
Sbjct: 375 ASKTFQEMSEFGLYPDCFCYTI-IIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLI 433
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK+ M A+ + + + G P+ TF I G KA+++
Sbjct: 434 NACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMS 493
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
PD T L+ L+ + EAK ++ I++ P+V+
Sbjct: 494 PDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVM 532
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
N+LL A RS D + + + + + + + L ++S+C G+ ++L EM+
Sbjct: 223 NSLLKALLRSHQLDLAWDILEGM-QSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMK 281
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM------------------------EK 231
N G++ + YT V++ L K + A L +M
Sbjct: 282 NYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSD 341
Query: 232 KGVDLDVAAYNVR----ITNTY------GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
K ++L + +NVR + +++ G+ + EM + GL PD Y ++
Sbjct: 342 KAINL-LNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGG 400
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +++A + + + G +P+ TT+ I C SG+ A + + ++ IPD
Sbjct: 401 YCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPD 460
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T L++G KK +++A
Sbjct: 461 VVTFNCLIDGFGKKGYLQKA 480
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 35/258 (13%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
L EI K N+ P LLK+ S D A ++L M++ G+ + + +
Sbjct: 206 LIHEI-KLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESY 264
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-----------------TYGGDPE-- 254
+GN + ++ EM+ G+ DV AY + I + G
Sbjct: 265 CAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDS 324
Query: 255 --------------RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
R + I+ + ++P+ Y+ MT CK+ M EA K ++ + E
Sbjct: 325 VSVSSVIDGYCKKGRSDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSE 384
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G P+ + I C G+ +KA++ E + P T LL+ K +
Sbjct: 385 FGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAM 444
Query: 361 AKGVI-RTIKKKFPPNVL 377
A+ ++ R + + P+V+
Sbjct: 445 AEYLLQRMMLEGLIPDVV 462
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 70/318 (22%)
Query: 120 FDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FDQM E+G VI+FN L+ C R+ + ++ + K L D ++YG ++
Sbjct: 209 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK--GLHIDVVTYGTIVNGM 266
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G + AL LL++ME ++ V Y+ +++ L K G+ +A+ L+SEM +KG+ +V
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326
Query: 239 AAYNVRITN--TYG--GDPERL--------------------------------KELIDE 262
YN I ++G D +RL ++L DE
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY-------------------------EG 297
M + PDT++YN ++ +CK+ D+AK ++ EG
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEG 446
Query: 298 LE------ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
++ G N TT+ T I+ C N + A +F+E + PD T +L+ G
Sbjct: 447 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 506
Query: 352 LVKKKKIKEAKGVIRTIK 369
+ +K++EA + I+
Sbjct: 507 FCENEKLEEALELFEVIQ 524
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 16/273 (5%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPI-------- 153
LI+ + ++ TF ++ +LG V++FN LL C R+ + + +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 154 -LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LFD++ + L+P I++ L+ C G +A L+N+M KG+ + VTY T++N
Sbjct: 207 SLFDQMV-EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNG 265
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
+ K G+ + A L S+ME+ + DV Y+ I G + L EM + G+ P+
Sbjct: 266 MCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN 325
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+YN ++ +C +A+++ + E +P+ TF I G +A K+
Sbjct: 326 VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD 385
Query: 332 ESVMVHK--IPDFNTVKLLVEGLVKKKKIKEAK 362
E M+H+ PD T ++ G K + +AK
Sbjct: 386 E--MLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 416
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 162/371 (43%), Gaps = 53/371 (14%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL++ S + + + P Y+ + RL K SD + L S + I +
Sbjct: 271 DTKSALNLLSKMEETHIKPDVVIYSA--IIDRLCKDGHHSDAQYLF-SEMLEKGIAPNVF 327
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPIL--- 154
N +I + G + A R M E V++FNAL+ A + +L++ +
Sbjct: 328 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 387
Query: 155 ------------------------FDEIPKKYNL--SPDKISYGLLLKSHCDSGSSDKAL 188
FD+ ++L SPD +++ ++ +C + D+ +
Sbjct: 388 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 447
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+LL E+ +G+ T TY T+++ + N A+ L+ EM GV D N+ +
Sbjct: 448 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL--- 504
Query: 249 YG-GDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
YG + E+L+E L + ++ + + DT++YN ++ CK +DEA ++ L +G
Sbjct: 505 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 564
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI------PDFNTVKLLVEGLVKKKKI 358
P+ T+ I CG A +V+ HK+ PD +T L+ G +K +I
Sbjct: 565 PDVQTYNVMISGFCGKSAISDA------NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 618
Query: 359 KEAKGVIRTIK 369
++ +I ++
Sbjct: 619 DKSIELISEMR 629
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 7/257 (2%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
K RF D + + + + +T +I Y +A D M+ ++ G +
Sbjct: 406 FCKHNRFDDAKHMFDLMASPDVVTFN----TIIDVYCRAKRVDEGMQLLREISRRGLVAN 461
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
++N L+ + LF E+ + + PD I+ +LL C++ ++ALEL
Sbjct: 462 TTTYNTLIHGFCEVDNLNAAQDLFQEMIS-HGVCPDTITCNILLYGFCENEKLEEALELF 520
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
++ +++ TV Y +++ + K +EA L+ + GV+ DV YNV I+ G
Sbjct: 521 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 580
Query: 252 DP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
L +M+D G +PD +YN L+ K +D++ ++ + NG S +A T
Sbjct: 581 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 640
Query: 311 RTWIYHLCGSGNFDKAY 327
+ + L G DK++
Sbjct: 641 K-MVADLITDGRLDKSF 656
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 12/220 (5%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEM 229
S+ +L+K CD +L ++ G + VT+ T+L+ L + EA L+ M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 230 EKKGVDLD----------VAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+ G D V +N I G L+++M GL D ++Y +
Sbjct: 203 VETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 262
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK A + +EE P+ + I LC G+ A +F E +
Sbjct: 263 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 322
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
P+ T +++G + +A+ ++R I+++ P+VL
Sbjct: 323 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 362
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 16/209 (7%)
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
S D A++ + M T V V+ + + A L+ +ME + + L++ ++N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 243 VRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA-------- 291
+ I D +L ++ G +PD +++N L+ C + + EA
Sbjct: 146 ILIKCFC--DCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 292 --KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
+++ + E G +P TF T I LC G +A + + V D T +V
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263
Query: 350 EGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
G+ K K A ++ +++ P+V+
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVV 292
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 151/330 (45%), Gaps = 39/330 (11%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L K K+F + +L+E+ + ++++ + ++R Y +A A+ TF++M G
Sbjct: 172 IEALGKIKQFKLVWSLVETMRCRGLLSKDTFKL-IVRRYARARKVKEAVETFEKMSIFGL 230
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKK--------------------------- 161
+ +N L+ ++S+ K ++ E+ +K
Sbjct: 231 KTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVK 290
Query: 162 --------YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ PD ++YG+L+ + C SG D+A+++ EME G + Y ++N L
Sbjct: 291 TMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGL 350
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPD 271
+ +EA + + + +K G ++V N + Y E +++DEMR+ + P+
Sbjct: 351 GSEERLDEALKYFEQYKKSGFPMEVPTCNA-VVGAYCRASKFEHAFKMVDEMRECKIGPN 409
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+ +Y+ ++ K++ +EA V++ + +GC P T+ + C +G D A V+K
Sbjct: 410 SRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWK 469
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ +P + L+ GL + +++EA
Sbjct: 470 QMGERGVLPCMHMFSALINGLCFENRLEEA 499
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 171/383 (44%), Gaps = 29/383 (7%)
Query: 2 TSLRHIRRLCTATTAAGSSTTASSISVSKAKSK-LRSEFDPDKALDIYSSVSKHYASPVS 60
T H ++ + T +G T A + A ++ LR P A PV
Sbjct: 47 TLFVHACQVLSRTHTSGFCTVAQRFTDEHASAEPLRFTVTPGDAFGD--------GPPVG 98
Query: 61 SRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL-CNLIRSYGQAGMFDHAMRT 119
A + R ++ + E I S + + P L ++++ AGM A
Sbjct: 99 ISEAAKMVCRIVS-----TQPEPRIASTLDALGVAMSPELVAEVLKNLSNAGMLALAFFR 153
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
+ + E G + F+ L+ A + + + V L + + + LS D ++ L+++ +
Sbjct: 154 WAERQE-GFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGLLSKD--TFKLIVRRYA 210
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DV 238
+ +A+E +M G++ Y +++ L K ++A+ ++ EM++KG + D+
Sbjct: 211 RARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDL 270
Query: 239 AAYNVRITNTYGGDPERL--KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
Y V + +G + + L K + EM DAG++PD ++Y L++ +CK+ DEA KV+
Sbjct: 271 KTYTV-LMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFY 329
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVMVHKIPDFNTVKLLVEGLV 353
+E +GC P+ + I L D+A K F K+S ++P N V V
Sbjct: 330 EMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAV---VGAYC 386
Query: 354 KKKKIKEAKGVIRTIKK-KFPPN 375
+ K + A ++ +++ K PN
Sbjct: 387 RASKFEHAFKMVDEMRECKIGPN 409
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 3/193 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+A+ ++ + P Y + + L +R + E +K + P
Sbjct: 322 DEAIKVFYEMEASGCMPSPHVYC--MLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCN 379
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ +Y +A F+HA + D+M E + +++ +L +S+ +++ +F +
Sbjct: 380 AVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMD 439
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P +Y +++ C +G D AL + +M +GV ++ ++N L + EE
Sbjct: 440 -GCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEE 498
Query: 222 AERLWSEMEKKGV 234
A + EM KG+
Sbjct: 499 ACVYFQEMLDKGI 511
>gi|168036356|ref|XP_001770673.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678034|gb|EDQ64497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 151/297 (50%), Gaps = 14/297 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSV---ISFNALLFACTRSRLYDKVPILFDEIP 159
L++ Y Q G AMRT M PRS +S+ + +C R L D+ ++ E+
Sbjct: 375 LMKGYVQKGRRSDAMRTLLAMQMDKDPRSSPNEVSYTTAISSCVRLGLMDEATVVLQEM- 433
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K+N+ + I+Y +LLK +C + KA ++ +ME GV + V+Y T++N + G+
Sbjct: 434 LKHNIPVNVITYNILLKGYCSARKLQKAHSVVKDMEEAGVALDVVSYNTLINGCIETGDN 493
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMR-DAGLKPDTISYN 276
A + +M + G+ +Y + +G G P+++ + +EMR D +K D +++N
Sbjct: 494 AAALDYFKKMRETGISPSAVSYTT-LMKAFGRNGQPKQVHLVFEEMRNDPRMKTDAVAWN 552
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI--YHLCGS-GNFDKAYKVFKES 333
L+ YC+N + +AK+++ ++E+ P A T+ T + Y L G G +K KE
Sbjct: 553 VLLDSYCRNGRVADAKRMFLQMKEDRVLPTAFTYATLVKGYALGGMLGEVLVLWKEIKER 612
Query: 334 V--MVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
V+ + PD + LV+ V+ ++A V+ +++K P +K++ EL
Sbjct: 613 TDDEVNPLQPDEVLLNCLVDTCVRAGYFQKALEVVACMEEKGIPANKTKYKRIFIEL 669
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 31/212 (14%)
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVL--------NCLYKQGNAEEAERLWSEMEKK 232
SG++ AL +LN M + + ++ V+ +CL +E RL E E +
Sbjct: 177 SGAARYALNVLNLMFEMDIYPSVKVWSAVVSRLGRHVDDCLLALELFDEVCRLIEEAESQ 236
Query: 233 GVDL-----DVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
G+D+ D A+N + G + ++L++ MR GL+PD+I++N L+ Y K +
Sbjct: 237 GIDVRSARPDTGAFNAALNACATLGFAAKGEDLMNSMRRCGLQPDSITFNTLIKLYAKCD 296
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---------------- 330
K + + + EN P+ +T + I G G+ +A +
Sbjct: 297 QRKLLKSLPDEMVENKVMPDESTVNSLIAGYVGLGDLREAEALLRRLQDKSEQGNDSKTK 356
Query: 331 -KESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
K H PD T L++G V+K + +A
Sbjct: 357 SKSWWGAHLRPDVRTYTTLMKGYVQKGRRSDA 388
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 12/206 (5%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D ALD + + + SP + Y ++ ++ + + + E +NDP++ +
Sbjct: 492 DNAAALDYFKKMRETGISPSAVSYTT--LMKAFGRNGQPKQVHLVFEEMRNDPRMKTDAV 549
Query: 100 LCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
N L+ SY + G A R F QM E + ++ L+ + +V +L+ EI
Sbjct: 550 AWNVLLDSYCRNGRVADAKRMFLQMKEDRVLPTAFTYATLVKGYALGGMLGEVLVLWKEI 609
Query: 159 PKKYN-----LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL--- 210
++ + L PD++ L+ + +G KALE++ ME KG+ Y +
Sbjct: 610 KERTDDEVNPLQPDEVLLNCLVDTCVRAGYFQKALEVVACMEEKGIPANKTKYKRIFIEL 669
Query: 211 -NCLYKQGNAEEAERLWSEMEKKGVD 235
+ LY +A + R SE ++ V+
Sbjct: 670 YSNLYTGKHASQRRRDRSEEKRDAVE 695
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 148/332 (44%), Gaps = 5/332 (1%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL 103
AL I+S++ S S + + L +S R D L + + E +
Sbjct: 90 ALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSF 149
Query: 104 IR-SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+ S AG+ D A + LG ++N LL + R D V LF+ +
Sbjct: 150 VAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVA-LFESWIQD 208
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SPD S+ +++K C G+ KALEL+ M G T+T+ +++ L + +
Sbjct: 209 GLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNK 268
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
+ +++ GV + A + + Y G E + ++M ++G +P+T++YN L+
Sbjct: 269 GHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLI 328
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
Y K M+ A ++Y L C P+ TF + I C G D A +++KE + H
Sbjct: 329 NGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQ 388
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P+ T +++ L K+ + EA ++R + +
Sbjct: 389 PNVYTFSIIIHSLCKQNRSAEALDILRELNMR 420
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 141/343 (41%), Gaps = 42/343 (12%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFD 121
YA + + L R D L ES D + + + N+ I+ + G F A+ +
Sbjct: 180 YAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVE 239
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M E G I+ N L+ R++ +K + + + P+ ++Y ++ +C +
Sbjct: 240 RMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKA 299
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNC------------LYKQ------------- 216
G + A+ + N+M G TVTY ++N +Y+Q
Sbjct: 300 GKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTF 359
Query: 217 ----------GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA 266
G ++A+R+W EM + +V +++ I + + R E +D +R+
Sbjct: 360 SSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQN--RSAEALDILREL 417
Query: 267 GLK----PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
++ P T YN ++ CK +DEA + ++E GC P+ T+ I C G
Sbjct: 418 NMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGR 477
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+A +F + V PD TV V ++K E ++
Sbjct: 478 IPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIM 520
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +AG A+ FD M G +V +FNAL+ R +K + DE+
Sbjct: 580 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALA- 638
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD+ +Y ++ + G + KA E +M N+G+++ TY +L K G + A
Sbjct: 639 GVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSA 698
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ EM + + + YN+ I GD +L+ +M G++PD +Y +
Sbjct: 699 LAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINA 758
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK M A K E +E G PN T+ T I+ + +KA F+E + PD
Sbjct: 759 CCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPD 818
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
L+ L+ + + EA
Sbjct: 819 KAVYHCLMTSLLSRATVAEA 838
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 2/251 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I +Y QA D A +M+E G + ++ ++ T R +K I+F + K+
Sbjct: 404 NIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRL-KE 462
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P I+YG L+ + G KALE+ M++ G++ TY+ ++N K +
Sbjct: 463 CGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTN 522
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ ++ K G+ DV YN I G G+ +R ++ EM+ +P + ++ ++
Sbjct: 523 AFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIH 582
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + M A ++++ + +GC P TF + L +KA ++ E + P
Sbjct: 583 GFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSP 642
Query: 341 DFNTVKLLVEG 351
D +T ++ G
Sbjct: 643 DEHTYTTIMHG 653
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 124/271 (45%), Gaps = 4/271 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI +Y + A+ +M+E G S+++++ ++ + + F + ++
Sbjct: 334 SLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKER 393
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + + YG ++ ++C + + D+A L+ EME +G++ Y T+++ N E+
Sbjct: 394 HT-NLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEK 452
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
++ +++ G V Y I N Y G + E+ M+ G+K + +Y+ L+
Sbjct: 453 CLIVFKRLKECGFAPSVITYGCLI-NMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLI 511
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K + A V+E + ++G P+ + I CG GN D+A + KE
Sbjct: 512 NGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCR 571
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
P T ++ G + +++ A + +++
Sbjct: 572 PTSRTFMPIIHGFARAGEMRRALEIFDMMRR 602
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
+ P Y L+ ++ ++AL + +M +G+E++ VTY+ V+ K GNAE A+
Sbjct: 325 IDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAAD 384
Query: 224 RLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ + +++ +L+ Y N+ + +R + L+ EM + G+ Y+ +M Y
Sbjct: 385 CWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGY 444
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
++ V++ L+E G +P+ T+ I G KA +V K V +
Sbjct: 445 TMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNM 504
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
T +L+ G +K K A V IK P+V+
Sbjct: 505 KTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVV 540
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 157/393 (39%), Gaps = 44/393 (11%)
Query: 18 GSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
G S T + V + SE D A + ++KH P S Y + L ++ R
Sbjct: 200 GVSPTVYTFGVVMKALCMVSEVD--SACSLLRDMAKHGCVPNSVIYQT--LIHALCENNR 255
Query: 78 FSDIETLIESHKNDPKITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
S+ L+E + EP ++I +AG A + D+M G ++
Sbjct: 256 VSEALQLLEDMF---LMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALT 312
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKK-------------------------YN------ 163
+ L+ R D+ L ++IP YN
Sbjct: 313 YGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAG 372
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
PD ++ +++ G ALELLNEM K E +TYT ++N KQG EEA
Sbjct: 373 YEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAA 432
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ + M KG+ L+ YN I G+ E +L EM G KPD ++N L+
Sbjct: 433 EIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGL 492
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CKN M+EA +Y + G N T+ T ++ + +A+K+ E + D
Sbjct: 493 CKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDN 552
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FP 373
T L++ L K +++ G+ + K FP
Sbjct: 553 ITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFP 585
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 103 LIRSYGQAGMFDHAM-RTFDQMDELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPK 160
LI Y +G F+ A ++ M G +FN ++ + L + +L + + K
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ P+ I+Y +L+ C G ++A E++N M KG+ + TV Y ++ L K GN E
Sbjct: 407 RF--EPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIE 464
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLM 279
EA +L+ EM KG D+ +N I E L +M G+ +T++YN L+
Sbjct: 465 EALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLV 524
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + + +A K+ + + GC + T+ I LC +G +K +F+E +
Sbjct: 525 HAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF 584
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
P + +L+ GL + K+ +A ++ I + P+++
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIV 623
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 163/364 (44%), Gaps = 14/364 (3%)
Query: 20 STTASSISVSKAKSKLRSEFDPDKALDIY--SSVSKHYASPVSSRYAQDLTVRRLAKSKR 77
S + + IS + L D +++++ + K Y+ + Y L + +L
Sbjct: 58 SLSLTPISPFQLCKLLELPLDIPTSMELFQRAGAQKGYSHTFDACY---LLIDKLGAVGD 114
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR-TFDQMDELGTPRSVISFN 136
F IE L++ K++ + +E +++ YG+AG+ A R D + S+N
Sbjct: 115 FKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYN 174
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
+L P +F ++ + +SP ++G+++K+ C D A LL +M
Sbjct: 175 VVLDILVDGDCPRVAPNVFYDMLSR-GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAK 233
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPER 255
G +V Y T+++ L + EA +L +M + DV +N I G
Sbjct: 234 HGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHE 293
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+L+D M G D ++Y +LM C+ +DEA+ + + +PN + T I
Sbjct: 294 AAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLIS 349
Query: 316 HLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFP 373
SG F++A + ++++ PD T ++++GLVKK + A ++ + K+F
Sbjct: 350 GYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE 409
Query: 374 PNVL 377
PNV+
Sbjct: 410 PNVI 413
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 4/255 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + G + A++ F +M G + +FN+L+ C ++ + + + D +
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE- 511
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + ++Y L+ + S +A +L++EM +G + +TY ++ L K G E+
Sbjct: 512 -GVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEK 570
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ EM KG+ + + N+ I+ G + + +M GL PD ++YN L+
Sbjct: 571 GLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLIN 630
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA ++ L+ G P+A T+ T I C G F+ A + + V IP
Sbjct: 631 GLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690
Query: 341 DFNTVKLLVEGLVKK 355
+ T +L+ +VKK
Sbjct: 691 NEVTWSILINYIVKK 705
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 78 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSE- 136
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A+ +M+++ + VTY T++N Y+ EEA
Sbjct: 137 GIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 196
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G KP+ I+Y+ L+
Sbjct: 197 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPG 256
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 257 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 316
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ LL+E K + +A
Sbjct: 317 EAGHYGLLIENFCKAGQYDKA 337
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 59 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 116
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G +R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 117 ILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPD 176
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 177 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 236
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 237 EMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 277
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M GT + I+++ LL + + ++ E+ KY
Sbjct: 218 LIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 277
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YGLL+++ C +G DK
Sbjct: 278 -LAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDK 336
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + + ++ L G A +AE L ++ K GV D
Sbjct: 337 AVKLLDKLIEKDIMLRPQSTLHLEPSAHNPMIEYLCNNGQASKAETLVRQLMKLGVQ-DP 395
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 396 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDS 455
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 456 MIENDHLPDSALFRS 470
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 30/327 (9%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L + +RF+D+ L + + + + Y+ + ++RS + F+ A M+
Sbjct: 106 LLRFRRFNDVLLLFDDIVS-ANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKL 164
Query: 131 SVISFNALLFACTRSRL--------------------------YDKVPILFDEIPKKYNL 164
S++ +N L+ +SR +++ +LF E+ +K L
Sbjct: 165 SIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGEK-GL 223
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
+ I+Y +L+ S C G D A+ L++M +E T Y +++N K GNA A+
Sbjct: 224 CANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKY 283
Query: 225 LWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+ EM KG+ V Y I+ G+ + ++ +EM G+ P+T ++ +++ C
Sbjct: 284 YFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLC 343
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ MM EA +++ ++E P+ T+ I C SGN +A+ + E V +PD
Sbjct: 344 RANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTY 403
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T + L+ GL ++ EAK + + K
Sbjct: 404 TYRPLISGLCSVGRVSEAKEFVDDLHK 430
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 138/307 (44%), Gaps = 37/307 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI Y G + A + +++M G + +F A++ R+ + + LF E+ K+
Sbjct: 302 SLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEM-KE 360
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P +++Y ++++ HC SG+ +A LL+EM KG T TY +++ L G E
Sbjct: 361 RKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSE 420
Query: 222 AERLWSEMEK-----------------------------------KGVDLDVAAYNVRIT 246
A+ ++ K +GV +D+ Y + I
Sbjct: 421 AKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILID 480
Query: 247 NTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
T D L L+ EM + GL+PD + Y ++ + K + EA +++ + + GC P
Sbjct: 481 GTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLP 540
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ I LC +G DKA + KE+++ P+ T ++ L + +++A +
Sbjct: 541 NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLH 600
Query: 366 RTIKKKF 372
+ K F
Sbjct: 601 HAMLKGF 607
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 134/295 (45%), Gaps = 9/295 (3%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
+V R++++K F D + HK+ K+ Y L+ Y + G F A+ M E G
Sbjct: 414 SVGRVSEAKEFVD-----DLHKDHHKLNNMCY-SALVHGYCKEGRFKDAVSACRVMVERG 467
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
++ + L+ R + L E+ + L PD + Y ++ H +G+ +A
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEM-HNHGLRPDAVIYTNMIDRHSKAGNLKEA 526
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L + M ++G VTYT ++N L K G ++AE L E V + Y + +
Sbjct: 527 FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDH 586
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
T GG+ E+ +L M G T+SYN L+ +C+ ++EA K+ G+ +N P+
Sbjct: 587 LTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPD 645
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ T IY C N +A K++ + PD LV G ++++A
Sbjct: 646 YITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKA 700
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 28/267 (10%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V + +ALL R R ++ V +LFD+I N+ PD Y +++S C+ +KA E++
Sbjct: 96 VRTLSALLNGLLRFRRFNDVLLLFDDIVSA-NVQPDIYIYSAVVRSLCELKDFNKAKEMI 154
Query: 192 NEMENKGVEVTTVTYTTVL----------------NCLYKQG----------NAEEAERL 225
+ ME +++ V Y ++ NCL ++G EAE L
Sbjct: 155 HWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELL 214
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ EM +KG+ + Y++ I + G+ + +D+M A ++ YN L+ YCK
Sbjct: 215 FKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCK 274
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
AK ++ + + G +P T+ + I C G + KA+KV+ E P+ T
Sbjct: 275 LGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYT 334
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKKK 371
++ GL + + EA + +K++
Sbjct: 335 FTAIISGLCRANMMAEAIRLFGEMKER 361
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I + +AG A +D M + G +V+++ AL+ ++ L DK +L E
Sbjct: 512 NMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVS 571
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+++P+ I+YG L G+ +KA++L + M KG TTV+Y ++ + G EE
Sbjct: 572 -DVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEE 629
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L M + D Y+ I + + +L M D GLKPDT++Y+FL+
Sbjct: 630 ATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVH 689
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATT 309
C +++A ++ + + G N T
Sbjct: 690 GCCIAGELEKAFELRDEMIRRGMRSNHVT 718
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ S + G +AM+ D+M+E G P + +++N+L+ C L + +L D + +K
Sbjct: 138 LVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLL-DRLIQK 196
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ +Y LL++ +D+A +LL+E+ KG E V+Y +L L K+G E+
Sbjct: 197 -GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTED 255
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL+ E+ KG +V +YN+ + + G E L+ EM P T++YN L+
Sbjct: 256 AIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIG 315
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ + A +V E + P A+++ I HLC G D K + + H P
Sbjct: 316 SLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNP 375
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ T + L ++ ++EA +I+++ K
Sbjct: 376 NEGTYN-AIATLCEEGMVQEAFSIIQSLGNK 405
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 9/257 (3%)
Query: 123 MDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M E G V LL+ C ++ + ++ E+ + PD SY L+ S C
Sbjct: 88 MVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM--EMMIGSGIIPDASSYTFLVSSLCRK 145
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G+ A++L+++ME G TVTY +++ L GN ++ +L + +KG+ + Y
Sbjct: 146 GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTY 205
Query: 242 NVRITNTY---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+ + Y G D +L+DE+ G +P+ +SYN L+T CK ++A +++ L
Sbjct: 206 SFLLEAAYKERGAD--EASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFREL 263
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G SPN ++ + LC G +++A + E + P T +L+ L +
Sbjct: 264 PSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRT 323
Query: 359 KEAKGVI-RTIKKKFPP 374
+ A V+ I+ +F P
Sbjct: 324 EHALEVLEEMIRARFKP 340
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 37/302 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G + A+R F ++ G +V+S+N LL + +++ +L E+
Sbjct: 243 LLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDE 302
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP ++Y +L+ S G ++ ALE+L EM + T +Y ++ L K G +
Sbjct: 303 R-SPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLV 361
Query: 223 ERLWSEMEKKGVDLDVAAYNV--------------RITNTYG------------------ 250
+ +M + + + YN I + G
Sbjct: 362 VKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSL 421
Query: 251 ---GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ +L+ EM G PD+ +Y+ L+ C M++EA +++ +EEN P+
Sbjct: 422 CRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDT 480
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ + I C S D A VF+ V +P+ T +LVEG++ +K++ A V+R
Sbjct: 481 ENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540
Query: 368 IK 369
++
Sbjct: 541 LQ 542
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 6/292 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+ A+ ++ + SP Y ++ +R L R+ + L+ D +
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSY--NILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYN 311
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI S G +HA+ ++M + S+N ++ + D V D++ +
Sbjct: 312 ILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYR 371
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +P++ +Y + + C+ G +A ++ + NK T Y V+ L ++GN
Sbjct: 372 H-CNPNEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYP 429
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L EM K G D Y+ I G E+ M + KPDT +YN L+
Sbjct: 430 AFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLIL 488
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CK+ D A V+E + G PN TT+ + + D A KV +E
Sbjct: 489 GCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRE 540
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 21/376 (5%)
Query: 10 LCTATTAAG---SSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQD 66
LC + G S T +I V + K P +A I++S+ + P + Y
Sbjct: 47 LCLGNNSCGTVRSRTKLMNILVERGK--------PQEAQFIFNSLVEQGHRPTTVTYTA- 97
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDE 125
V L + KRF I L+ S + I + L N +I ++ ++G AM F +M+E
Sbjct: 98 -LVAALTRQKRFKAISGLL-SEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEE 155
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G + +FN L+ R ++ L + + + NL P+ +Y +L+ + C S
Sbjct: 156 SGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIK 215
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+A ++++M GV+ VTY T+ + G +AE + +M K V+ + + I
Sbjct: 216 EAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGI-I 274
Query: 246 TNTY---GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
Y G E L+ ++ MRD G+ P+ + +N L+ + D K +EE+G
Sbjct: 275 VGGYCEQGNLAEALR-VVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESG 333
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
P+ TF T + +G DK ++F + + PD + +L +G V+ + +A+
Sbjct: 334 VKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAE 393
Query: 363 GVIRTIKK-KFPPNVL 377
++ + K PNV+
Sbjct: 394 SLLNFMSKYGVRPNVV 409
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 144/324 (44%), Gaps = 47/324 (14%)
Query: 101 CNLIRS-YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CNL+ S + G D + ++ G ++S+NA+L ++ +D V L E+
Sbjct: 181 CNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV 240
Query: 160 K---------KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
+ ++ +PD Y ++ C G + A ++L+ M + G++ V Y TVL
Sbjct: 241 RVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 300
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLK 269
L EEAE L +EM ++ LD +N+ + G +R+ EL+++M + G
Sbjct: 301 KGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCI 360
Query: 270 PDTISYNFLMTCYCKNEMMDEA-----------------------------------KKV 294
PD I+Y ++ +CK ++DEA +++
Sbjct: 361 PDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQEL 420
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + GC PN TF T I +C G ++A ++ K+ ++ PD + +++GL K
Sbjct: 421 ISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGK 480
Query: 355 KKKIKEAKGVIRT-IKKKFPPNVL 377
K +EA ++ I K PN +
Sbjct: 481 AGKTEEALELLNVMINKGITPNTI 504
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 148/321 (46%), Gaps = 4/321 (1%)
Query: 46 DIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIR 105
DI S + + P Y + ++ L ++R+ + E L+ + + L+
Sbjct: 279 DILSRMPSYGLKPNVVCY--NTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 336
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
+ Q G+ D + +QM E G VI++ ++ + L D+ +L +
Sbjct: 337 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM-SACGCK 395
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ ISY ++LK C + A EL++ M +G VT+ T++N + K+G AE+A L
Sbjct: 396 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIEL 455
Query: 226 WSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M G D+ +Y+ I G E EL++ M + G+ P+TI Y+ + + +
Sbjct: 456 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 515
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
D+ ++++ +++ +A + I LC D+A F V +P+ +T
Sbjct: 516 EGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 575
Query: 345 VKLLVEGLVKKKKIKEAKGVI 365
+L+ GL + ++EA+ ++
Sbjct: 576 YTILIRGLASEGLVREAQDLL 596
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 7/249 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G+ D A+ M G + IS+ +L R+ + L + ++
Sbjct: 369 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 428
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ +++ L+ C G +++A+ELL +M G ++Y+TV++ L K G EEA
Sbjct: 429 CL-PNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 487
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L + M KG+ + Y+ + + G +++ ++ D ++DA ++ D YN +++
Sbjct: 488 LELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISS 547
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE-----SVMV 336
CK D A + + NGC PN +T+ I L G +A + E +V
Sbjct: 548 LCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRK 607
Query: 337 HKIPDFNTV 345
H + F V
Sbjct: 608 HLVRHFGIV 616
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 105/276 (38%), Gaps = 53/276 (19%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LIRS AG A R D G V+++NA++ R+ L +P
Sbjct: 50 LIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP--- 103
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ +Y +++S C G AL +L+EM +G T +L + G A
Sbjct: 104 -VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R + KG LD N+ ++ G + EL+ ++ G +PD +SYN ++
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222
Query: 282 YCK-------NEMMDEAKKVYEGLE---ENGCSP-------------------------- 305
C E+M E +V+E L E+GC+P
Sbjct: 223 LCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILS 282
Query: 306 ---------NATTFRTWIYHLCGSGNFDKAYKVFKE 332
N + T + LC + +++A + E
Sbjct: 283 RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 318
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 132/280 (47%), Gaps = 4/280 (1%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L L+ Y Q A M + G +V + N LL R+ K L E+
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM- 168
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ +L PD SY +++ C+ +KALEL NEM+ G + VT+ +++ K G
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
+EA EM+ G++ D+ Y I G+ +R K L DE+ + G P I+YN L
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ +CK + EA +++E + E G PN T+ I LCG G +A + + +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDE 348
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
P+ T +++ L K + +A ++ +KK+ P N+
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 154/336 (45%), Gaps = 16/336 (4%)
Query: 37 SEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR---RLAKSKRFSDIETLIESHKNDPK 93
E D KAL + V + SP + Y + +R +L + K S+I + P
Sbjct: 261 GELDRGKAL--FDEVLERGDSPCAITY--NTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVP 152
+ LI G A++ + M E + +++N ++ C + D V
Sbjct: 317 VYTYT---GLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM--ENKGVEVTTVTYTTVL 210
I+ E+ KK PD I+Y +LL C G D+A +LL M ++ + ++Y ++
Sbjct: 374 IV--ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLK 269
+ L K+ +A ++ + +K D N+ + +T GD + EL ++ D+ +
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
++ +Y ++ +CK M++ AK + + + P+ + + LC G+ D+A+++
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
F+E + PD + ++++G +K IK A+ ++
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 39/244 (15%)
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
T VIS+NAL+ C +RL+ + I +D + +K + D+++ +LL S +G +K
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDI-YDLLVEKLG-AGDRVTTNILLNSTLKAGDVNK 477
Query: 187 ALELLNEMENKGVEVTTVTYTTVL-------------------------------NCLY- 214
A+EL ++ + + + TYT ++ NCL
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 215 ---KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKP 270
K+G+ ++A RL+ EM++ DV ++N+ I + GD + + L+ M AGL P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
D +Y+ L+ + K +DEA ++ + ++G P+A + + + G DK ++
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELV 657
Query: 331 KESV 334
K+ V
Sbjct: 658 KKLV 661
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 113/276 (40%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I + G+ A+ + M + T I++N LL C + L + +L+ +
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD ISY L+ C +AL++ + + K VT +LN K G+ +
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A LW ++ + + Y I G K L+ +MR + L+P YN L++
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D+A +++E ++ + P+ +F I +G+ A + P
Sbjct: 538 SLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSP 597
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
D T L+ +K + EA + + F P+
Sbjct: 598 DLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ S + G D A R F++M V+SFN ++ ++ L + +
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA- 593
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
LSPD +Y L+ G D+A+ ++M + G E +VL QG E
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG---ET 650
Query: 223 ERLWSEMEKKGVDLDVA 239
++L +E+ KK VD D+
Sbjct: 651 DKL-TELVKKLVDKDIV 666
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 138/305 (45%), Gaps = 37/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+S+G+ GM + + + +M E G ++ ++N L+ + D +F E+ +
Sbjct: 175 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESG 233
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y ++K +C +G + KA+E L +ME +G E +TY T++ Y +
Sbjct: 234 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 293
Query: 223 ERLWSEMEKKGVDL-----------------------------------DVAAYNVRITN 247
L+ EM++KG+ + +VA Y V I
Sbjct: 294 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 353
Query: 248 -TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G E L+ M D G KPD ++Y+ ++ CKN ++EA + +G + N
Sbjct: 354 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 413
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ + + I L +G D+A ++F+E D L++ K +K+ EA + +
Sbjct: 414 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 473
Query: 367 TIKKK 371
++++
Sbjct: 474 RMEEE 478
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 6/262 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
+I + G + F+ M G+ +V + L+ +S + D + +L I +
Sbjct: 315 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 374
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +++ C +G ++AL+ + G+ + ++ Y+++++ L K G +E
Sbjct: 375 FK--PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 432
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEM-RDAGLKPDTISYNFLM 279
AERL+ EM +KG D YN I T + L M + G +Y L+
Sbjct: 433 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 492
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ K +EA K+++ + + G +P A FR LC SG +A K+ E + I
Sbjct: 493 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 552
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
D + ++ L K +IKEA
Sbjct: 553 LD-AACEDMINTLCKAGRIKEA 573
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D++ + EI KK+ + L+KS G ++ L + +M+ G+E T TY
Sbjct: 151 DRIRFVSSEI-KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 209
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAG 267
++N L + AER++ ME + D+ YN I G ++ E + +M G
Sbjct: 210 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 269
Query: 268 LKPDTISY-NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
+ D I+Y + CY ++ +Y+ ++E G F I LC G ++
Sbjct: 270 HEADKITYMTMIQACYADSD-FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 328
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
Y VF+ + P+ +L++G K +++A ++ R I + F P+V+
Sbjct: 329 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 380
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ V L K+ R + + + D + +LI G+AG D A R F++M E
Sbjct: 384 VVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEK 443
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G R +NAL+ A T+ R D+ LF + ++ +Y +LL +++
Sbjct: 444 GCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEE 503
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
AL+L + M +KG+ T + + L G A ++ E+ GV LD A ++ T
Sbjct: 504 ALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINT 563
Query: 247 NTYGGDPERLKELIDEMRDAG 267
G + +L D + + G
Sbjct: 564 LCKAGRIKEACKLADGITERG 584
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 131/261 (50%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+AG+ +++ F +M+ELG R++ S++AL R Y F+++ +
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + +TY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ K ++ +V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C +GN D A V K + +
Sbjct: 265 LCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGVLIENYCKAGQYDQA 345
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D + L++ S+ +G ++++L +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDXDMWVLMIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
I+YN ++ Y + + M+EA+K + ++ PN T+ T I D A ++ +
Sbjct: 185 VITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKY 285
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 103/254 (40%), Gaps = 45/254 (17%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + + E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKY 285
Query: 163 NLSPDK------IS-----------------------------YGLLLKSHCDSGSSDKA 187
D IS YG+L++++C +G D+A
Sbjct: 286 IAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQA 345
Query: 188 LELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
++LL+++ K + + Y ++ L G +AE L ++ K GV D
Sbjct: 346 VKLLDKLIEKDIILRPQSTLHMEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQ-DPT 404
Query: 240 AYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
A N I ++ G P+ EL+ M + + +Y+ L+ Y K +AK + +
Sbjct: 405 ALNTLIRGHSREGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPXDAKAALDSM 464
Query: 299 EENGCSPNATTFRT 312
EN P+++ FR+
Sbjct: 465 IENDHLPDSSLFRS 478
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 11/194 (5%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T LI S +AG D A M L P + L+ ++ YD+ L
Sbjct: 289 TDNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKL 348
Query: 155 FDE-IPKKYNLSPDKI------SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYT 207
D+ I K L P +Y +++ C++G KA L+ ++ GV+ T
Sbjct: 349 LDKLIEKDIILRPQSTLHMEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQDPT-ALN 407
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRD 265
T++ ++G+ + A L M ++ VD + +AY+ + +Y +P K +D M +
Sbjct: 408 TLIRGHSREGSPDSAFELLKIMLRRKVDSEKSAYD-SLVQSYLKKSEPXDAKAALDSMIE 466
Query: 266 AGLKPDTISYNFLM 279
PD+ + +M
Sbjct: 467 NDHLPDSSLFRSVM 480
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L+ SY + +A + ++M G P + +N + + C + +L P L D K
Sbjct: 182 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL--PSPDLLDLAEK 239
Query: 161 KY------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
Y N +K++ + C G DKA +L+ EM KG T TY+ V+ L
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
E+A L+ EM+ GV DV Y + I + G E+ + L +EMR G P +
Sbjct: 300 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 359
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y L+ Y K + + +A ++ + + GC PN T+ + LC +GN KA++V+ +
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 334 VMV---------------HKI-PDFNTVKLLVEGLVKKKKIKEA 361
+ H + P+ T LV+GL K K+ A
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 167/395 (42%), Gaps = 61/395 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + + + P +S Y++ +T L + + L + K +T + Y
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITF--LCHATKVEKAFLLFQEMKM-VGVTPDVYTY 326
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP-------- 152
LI S+ +AG+ + A F++M +G +V+++ AL+ A +++ +VP
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK---QVPQANDIFHR 383
Query: 153 --------------ILFDEIPK-------------------------------KYNLSPD 167
L D + K ++ L+P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
++YG L+ C + D A ELL+ M + G E + Y +++ K G + A+ ++
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 228 EMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
+M K G V Y I + G + +++ +M P+ ++Y ++ C+
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
++A K+ +EE GCSPN T+ I L +G D + +F + P++ T +
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
+L+ L + +A+ ++ +K+ + P L+ ++
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG D A F QM + G SV ++ +L+ + D + ++ K
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD- 543
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +P+ ++Y ++ C G S+KAL+LL+ ME KG VTYT +++ L K G + +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG---DPERLK---------------------- 257
L+++M +KG + Y V I + D RL
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 663
Query: 258 ---------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE--NGCSPN 306
+++EM G P Y L+ C+ K ++ A ++++ + E + +
Sbjct: 664 FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTD 723
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + I LC + ++A++++ E +P+ + L++GLV+ KK EA
Sbjct: 724 NDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 118/311 (37%), Gaps = 50/311 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L++ AG D R +M E G + A C R D + ++ E K
Sbjct: 46 LVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKL 105
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + GL+ S+ D+A+ L+ M VTY T+L+ K+
Sbjct: 106 DTVLCTHMISGLMEASY-----FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLM 279
+R+ + M +G + + + +N + ++Y D +L++ M G P + YN +
Sbjct: 161 CKRIINMMMTEGCNPNPSLFN-SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 219
Query: 280 TCYCKNE------MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---- 329
C E ++D A+K+Y + C N + LCG G FDKA+++
Sbjct: 220 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279
Query: 330 -------------------------------FKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
F+E MV PD T +L++ K I
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339
Query: 359 KEAKGVIRTIK 369
++A+ + ++
Sbjct: 340 EQAQWLFEEMR 350
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 12/204 (5%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + P K++Y L++ +G D + EM G + T + L K+G
Sbjct: 32 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-----RLKELIDEMRDAGLKPDTIS 274
+A + +E++ LD V T+ G E + MR P+ ++
Sbjct: 92 ADALDM---IEREDFKLD----TVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L++ + K + + K++ + GC+PN + F + ++ C ++ AYK+
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKI 358
P + + + + ++K+
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKL 228
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 37/264 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G D AM+ QM + +V+++ A++ R +K L + +K
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y L+ +G D +L+L +M KG VTY ++N L G ++
Sbjct: 579 -GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDK 637
Query: 222 AERLWSEMEKK------------------------GVDLDVAAYN-VRITNTYG------ 250
A L EM++ G+ ++ +Y V I YG
Sbjct: 638 ARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCF 697
Query: 251 ---GDPERLKELIDEMRD--AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E EL EM + + +K D Y L+ C ++EA ++Y + G P
Sbjct: 698 SKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVP 757
Query: 306 NATTFRTWIYHLCGSGNFDKAYKV 329
+ F I L +D+A ++
Sbjct: 758 ELSVFVCLIKGLVEVKKWDEALQL 781
>gi|357516331|ref|XP_003628454.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
gi|355522476|gb|AET02930.1| hypothetical protein MTR_8g058400, partial [Medicago truncatula]
Length = 303
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 8/306 (2%)
Query: 22 TASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI 81
++ IS + S LRS+ DP A I+ + HY + S DL + +L ++K +
Sbjct: 3 SSKPISPFRLSSLLRSQKDPSLAFQIFLNPQNHYRYSILS---YDLIITKLGRAKMIPQM 59
Query: 82 ETLIESHKNDPKI-TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
E +++ ND + EP LC++I Y +A + A++TF + ++ SFN+LL
Sbjct: 60 ELILQQLHNDTRHRVPEPLLCHVISFYARARLPSRAVQTFLSIPSFRCTPTLKSFNSLLN 119
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
A R + + + + P+ +Y +L++S G +D+ALEL +EM V
Sbjct: 120 ALLTCRRFQTITHFASRLSEFG--PPNTCTYNILIRSCFFQGRTDRALELFDEMRRTNVC 177
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEM-EKKGVDLDVAAY-NVRITNTYGGDPERLKE 258
VT+ T+++ L K +A + M ++ + V+ Y N+ G+ R E
Sbjct: 178 PDQVTFGTLIHGLCKDSRMHQAFGMKKLMIQEFKLKPCVSVYTNLMKGVCEIGELHRAFE 237
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+ DEM GL+ D + YN L+ K +EA +V E ++E+G N+ T I C
Sbjct: 238 IKDEMERNGLRLDVVVYNTLVNALFKAGRKEEALRVLEEMKESGYHWNSVTCNVMIGEFC 297
Query: 319 GSGNFD 324
NF
Sbjct: 298 RQKNFQ 303
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 41/325 (12%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ Y + A+ DQM E+G +F L+
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D++ ++ PD ++YG ++ C G D AL LL +ME +E V Y T+
Sbjct: 206 EAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYG--GDPERL--------- 256
++ L K + ++A L++EM+ KG+ DV Y+ I+ YG D RL
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 257 -----------------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
++L DEM + PD +Y+ L+ +C ++ +DEAK
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++E + C PN T+ T I C + ++ ++F+E + + T L+ G
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 354 KKKKIKEAKGVIR-TIKKKFPPNVL 377
+ + A+ V + + PN+L
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNIL 469
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + F+ + +QM LG + +++ + C RS+L + +L +
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y PD ++ LL +C S A+ L+++M G + T T+TT+++ L+ A E
Sbjct: 149 Y--EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +M ++G D+ Y + GD + L+ +M ++ D + YN ++
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + MD+A ++ ++ G P+ T+ + I LC G + A ++ + + P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ T L++ VK+ K+ EA+ + IK+ P++
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 139/309 (44%), Gaps = 9/309 (2%)
Query: 72 LAKSKRFSDIETLIESHKND---PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L K K D L N P + L + + +YG+ + A R M E
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR---WSDASRLLSDMIERKI 324
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+V++F+AL+ A + + L+DE+ K+ ++ PD +Y L+ C D+A
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ M +K VTY+T++ K EE L+ EM ++G+ + Y I
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 249 YGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ D + + + +M G+ P+ ++YN L+ CKN + +A V+E L+ + P+
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ I +C +G + +++F + P+ ++ G +K +EA +++
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 368 IKKKFP-PN 375
+K+ P PN
Sbjct: 564 MKEDGPLPN 572
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/333 (20%), Positives = 158/333 (47%), Gaps = 12/333 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES---HKNDPKITQEP 98
D AL++++ + P Y+ ++ L R+SD L+ K +P +
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISC--LCNYGRWSDASRLLSDMIERKINPNVVT-- 330
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
LI ++ + G A + +D+M + + ++++L+ C RL D+ +F+
Sbjct: 331 -FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFEL 388
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K + P+ ++Y L+K C + ++ +EL EM +G+ TVTYTT+++ ++
Sbjct: 389 MISK-DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 447
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYN 276
+ + A+ ++ +M GV ++ YN+ + G + + + ++ + ++PD +YN
Sbjct: 448 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CK +++ +++ L G SPN + T I C G+ ++A + K+
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+P+ T L+ ++ + + +I+ ++
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
++ K+KR + L + LI + QA D+A F QM +G
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+++++N LL ++ K ++F E ++ + PD +Y ++++ C +G +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
EL + KGV + Y T+++ ++G+ EEA+ L +M++ G + YN I
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRAR 583
Query: 248 TYGGDPERLKELIDEMRDAGLKPD 271
GD E ELI EMR G D
Sbjct: 584 LRDGDREASAELIKEMRSCGFAGD 607
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 12/243 (4%)
Query: 144 RSRLYDKVPI-----LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
R+RL D + + LF ++ K P + + LL + + + L +M+ G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE 258
+ TY+ +NC ++ A + ++M K G + D+ + + N Y +R+ +
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS-SLLNGY-CHSKRISD 171
Query: 259 ---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
L+D+M + G KPDT ++ L+ + EA + + + + GC P+ T+ T +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
LC G+ D A + K+ D +++GL K K + +A + + K P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 375 NVL 377
+V
Sbjct: 292 DVF 294
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 139/295 (47%), Gaps = 33/295 (11%)
Query: 100 LCN--------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKV 151
LCN LIR Y + GM D+A+ TF+ + +G SV + N +L + + + + V
Sbjct: 158 LCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELV 217
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
LF E+ K + P+ ++ +L+ C G+ KA LL +ME G T VTY T+LN
Sbjct: 218 WSLFREMSDK-GICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 276
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKP 270
K+G + A L M KG++ DV YNV I N + L+ +MR + P
Sbjct: 277 WYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP 336
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ ++YN L+ + K + A +V+ + + SPN T+ I C G+F++A ++
Sbjct: 337 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 396
Query: 331 ----------------KESVMVHKIPDFN-------TVKLLVEGLVKKKKIKEAK 362
E++ V+ + + N T +LV L + K+ EA+
Sbjct: 397 DHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 451
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 125 ELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
E+ +P V ++N L+ + +F+E+ K ++LSP+ ++Y L+ HC G
Sbjct: 332 EMISPNEV-TYNTLINGFVKEGKIGVAAQVFNEMSK-FDLSPNCVTYNALIGGHCHVGDF 389
Query: 185 DKALELLNEMENKGVEVTTVTYTT-------VLNC----------------LYKQGNAEE 221
++AL LL+ ME G+ + T V+NC L + G E
Sbjct: 390 EEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 449
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
AE+ M + G+ + Y+ I N YG GDP D+M G P +Y L+
Sbjct: 450 AEKFLCHMSRIGLVPNSITYDC-IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 508
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + EAKK L + ++ + T + C SGN +A +F + V + +
Sbjct: 509 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 568
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK---FPPNVL 377
PD T L+ GL +K K A + T + FP +V+
Sbjct: 569 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 609
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+A M+D A + ++G I F AL+ D P L + IP ++L
Sbjct: 124 KARMYDSAKSILRHLCQMGIGSKSI-FGALM---------DTYP-LCNSIPSVFDL---- 168
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
L++ + G D A+E + G + + T +L + K E L+ E
Sbjct: 169 -----LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M KG+ +V +N+ I G+ ++ L+ +M + G P ++YN L+ YCK
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
A ++ + + G + T+ +I +LC + KAY + K+ P+ T
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343
Query: 348 LVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
L+ G VK+ KI A V + K PN +
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 374
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 134/322 (41%), Gaps = 52/322 (16%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS------------- 145
Y C L+ +AG A F++M + GT ++FNA++ +C+R
Sbjct: 610 YTC-LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 668
Query: 146 RLYDKVP------ILFDEIPKKYNL---------------SPDKISYGLLLKSHCDSGSS 184
R + P IL KK L PDK+++ L+ SG
Sbjct: 669 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 728
Query: 185 DKALELL------------NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
D ++LL +EM GV Y T++N + + G+ + A +L EME
Sbjct: 729 DLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEAL 788
Query: 233 GVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G A + + + G E ++D M L P ++ LM +C++ + EA
Sbjct: 789 GFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEA 848
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLV 349
K+ +E G + + I +C +G+ A+++++E M H+ P+ T +LV
Sbjct: 849 LKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEE--MRHRDLCPNITTYAVLV 906
Query: 350 EGLVKKKKIKEAKGVIRTIKKK 371
+ + + + + ++ ++++
Sbjct: 907 DAISAANNLIQGEKLLTDLQER 928
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 120/294 (40%), Gaps = 27/294 (9%)
Query: 83 TLIESHKNDPKITQ-EPYLCNL---------------IRSYGQAGMFDHAMRTFDQMDEL 126
L+ S D K+ + E +LC++ I YG G +A FD M +
Sbjct: 436 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKC 495
Query: 127 GTPRSVISFNALLFA-CTRSRLYDKVPIL--FDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
G S ++ +LL C L + L IP + D + Y LL C SG+
Sbjct: 496 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG----AVDSVMYNTLLAETCKSGN 551
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL-DVAAYN 242
+A+ L ++M V + TY+++L L ++G A A L+ +G + Y
Sbjct: 552 LHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYT 611
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM-TCYCKNEMMDEAKKVYEGLEE 300
+ + G P+ +EM G PDT+++N ++ +C + +MM +A + +
Sbjct: 612 CLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM-KANDFFSTMRW 670
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
G PN T+ ++ + ++ + PD T L+ GL K
Sbjct: 671 WGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 724
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
GLL HC G ++ A+ +L+ M + T T+TT+++ + EA +L ME
Sbjct: 803 GLL---HC--GKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 857
Query: 232 KGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
G+ LDV AYNV I GD EL +EMR L P+ +Y L+ + +
Sbjct: 858 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 917
Query: 291 AKKVYEGLEENG 302
+K+ L+E G
Sbjct: 918 GEKLLTDLQERG 929
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF-ACTRSRLYDKVPILFDEIPKK 161
++R G + AM D M + ++ +F L+ C +++ + + + + +
Sbjct: 800 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL--KGVMEL 857
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L D ++Y +L+ C +G S A EL EM ++ + TY +++ + N +
Sbjct: 858 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 917
Query: 222 AERLWSEMEKKGV 234
E+L ++++++G+
Sbjct: 918 GEKLLTDLQERGL 930
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 132/303 (43%), Gaps = 39/303 (12%)
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
P +LIRS G+ D + + M G S +++N LL + L D +FD
Sbjct: 174 PSSASLIRSLAALGLADELLWAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDA 233
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVTTVTYTTVLNCLYKQ 216
+ + + PD +SY +L+K +C +G + A+ L M E + VTY T++ Y +
Sbjct: 234 MSTEDRVRPDVVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSE 293
Query: 217 GNAEEAERLWSEMEKKGVDLDV------------------------------------AA 240
G + RL+ EME+ G+ D+ AA
Sbjct: 294 GTFSQCIRLFQEMEEMGMGKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAA 353
Query: 241 YNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
+ +T G G L + M+ +GL+ D I+Y ++ C C+ +DEA +
Sbjct: 354 MYTALIDTMGKFGRENEAMLLFERMKASGLELDAITYGVIVNCLCRFGKLDEAILCFRNC 413
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
E G + NA + + I +G D+A ++F+E + +PD +L++GL K ++
Sbjct: 414 VEKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRL 473
Query: 359 KEA 361
+A
Sbjct: 474 DDA 476
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 20/291 (6%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
I Q Y+ +I + + G + F++M + G P + AL+ + ++ +
Sbjct: 315 IPQHAYVL-VIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEAML 373
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF+ + K L D I+YG+++ C G D+A+ KG+ V + YT++++
Sbjct: 374 LFERM-KASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLIDGF 432
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDT 272
K G ++A+ L+ EM+ KG D YNV I G + L M D G
Sbjct: 433 GKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDGCDQTV 492
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+Y ++ K +EA K + + + G +P A FRT+ LC SG F +A ++ E
Sbjct: 493 YTYTIIIDGLFKKHKNEEAIKFWNTMIDKGITPTAAAFRTFANGLCLSGKFSRACRILDE 552
Query: 333 SVMVHKIPD---------------FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ IP+ F L +G+V+K +E G +RT+
Sbjct: 553 LAPMGVIPETAHEDMINVLCKAGRFKQACKLADGIVQKG--REIPGRVRTM 601
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G D A+ F E G + I + +L+ ++ + D+ LF+E+ K PD
Sbjct: 401 GKLDEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVDQAQELFEEMKVK-GFVPDSYC 459
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +L+ +G D A L ME+ G + T TYT +++ L+K+ EEA + W+ M
Sbjct: 460 YNVLIDGLAKAGRLDDACALYKRMEDDGCDQTVYTYTIIIDGLFKKHKNEEAIKFWNTMI 519
Query: 231 KKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KG+ AA+ G R ++DE+ G+ P+T ++ ++ CK
Sbjct: 520 DKGITPTAAAFRTFANGLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFK 578
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
+A K+ +G+ + G I L +GN D A K+ + +
Sbjct: 579 QACKLADGIVQKGREIPGRVRTMMITALRKAGNTDLAVKLVHSKIGI 625
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 183 SSDKALELLNEMENKG----VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
++D A +L+ E+ +G + +T + +++ L G A+E WS M GV+
Sbjct: 149 AADHARQLVAELRARGDAVLMHLTPPSSASLIRSLAALGLADELLWAWSAMRLAGVEPSR 208
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMR-DAGLKPDTISYNFLMTCYCK-NEMMDEAKKVY 295
YN + G + + D M + ++PD +SYN L+ YC+ D ++
Sbjct: 209 VTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQDAMARLA 268
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK---ESVMVHKIPDFNTVKLLVEGL 352
E+ SP+ T+ T + G F + ++F+ E M IP V L++ L
Sbjct: 269 HMREQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGKDIPQHAYV-LVIGAL 327
Query: 353 VKKKKIKEAKGVI-RTIKKKFP 373
K+ K E V R +K +P
Sbjct: 328 CKEGKPFEGLAVFERMLKSGYP 349
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 180/385 (46%), Gaps = 24/385 (6%)
Query: 26 ISVSKAKSKLRSEFDPD--KALDIYSSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDIE 82
+S + ++ LR++ D +A + + + + + +AQ L+ R K + +
Sbjct: 93 LSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAMRVL 152
Query: 83 TLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
L++ P I+ +CN+ + AG D A+ ++M +G V ++N L+
Sbjct: 153 HLMQKDGCAPDIS----ICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKG 208
Query: 142 -CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN-KGV 199
C R+ D + ++ + + PDKISY ++ C ++ LL M N G+
Sbjct: 209 LCGARRVVDAMEMI--GVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGL 266
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLK 257
VTY +++ L K G+A+EA E E K +D Y+ I +++ G K
Sbjct: 267 FPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA-IVHSFCLNGRMAEAK 325
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
E++ EM G +PD ++Y+ ++ +C+ +D+A+K+ + + +N C PN T + L
Sbjct: 326 EIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGL 385
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKKKFPPNV 376
C G +A+++ +S P T +++ G ++ K+KE+ V++ ++K F P
Sbjct: 386 CKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTT 445
Query: 377 LRAWKKVEEELGLVPAPAVGDGQKA 401
+ E+ L+ DG+ A
Sbjct: 446 V--------EINLLIHALCKDGKPA 462
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 23/306 (7%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQ-------M 123
L K KR ++ L++ +ND + + N LI + G D A+ + +
Sbjct: 244 LCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRV 303
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
DE+G V SF C R+ + I+ + I K PD ++Y ++ C G
Sbjct: 304 DEVGYSAIVHSF------CLNGRMAEAKEIVGEMISK--GCQPDVVTYSTVVDGFCRIGE 355
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
D+A +++ M + TVT+T +LN L K G EA L ++ E++ Y+V
Sbjct: 356 LDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSV 415
Query: 244 RITNTYGGDPE-RLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ +G E +LKE D +M G P T+ N L+ CK+ EAK E +
Sbjct: 416 VM---HGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQ 472
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
GC+ N F T I+ G+ + A + + + ++ PD T ++V+ L KK ++K
Sbjct: 473 SKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLK 532
Query: 360 EAKGVI 365
EA G++
Sbjct: 533 EATGLV 538
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDE 157
Y C LI+ A AM M + G P IS+ ++ F C R+ ++V L
Sbjct: 202 YNC-LIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV-EEVRGLLQR 259
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ L PD+++Y +L+ G +D+ALE L E E K V V Y+ +++ G
Sbjct: 260 MRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNG 319
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
EA+ + EM KG DV Y+ + G+ ++ ++++ M KP+T+++
Sbjct: 320 RMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHT 379
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK EA ++ EE +P+ T+ ++ G ++ V + +
Sbjct: 380 ALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQK 439
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P + LL+ L K K EAK + + K
Sbjct: 440 GFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSK 474
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 122/270 (45%), Gaps = 13/270 (4%)
Query: 124 DELGTPRSVISFNALLFACTR-SRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
+E TP S I+++ ++ R +L + ++ + K + P + LL+ + C G
Sbjct: 403 EEWWTP-SDITYSVVMHGFRREGKLKESCDVVVQMLQKGF--FPTTVEINLLIHALCKDG 459
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+A + + + ++KG + V +TTV++ +QG+ E A L +M +
Sbjct: 460 KPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLS--NRHPDVVT 517
Query: 243 VRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+ G RLKE L+++M + GL P ++Y ++ YC+ +++ + E +
Sbjct: 518 YTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKML 577
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
+ + + LC G ++AY + + + + D T +L+E + +
Sbjct: 578 AR--QEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLGL 635
Query: 360 EAKGV-IRTIKKKFPPNVLRAWKKVEEELG 388
+A V R ++ P+V + +KV+ +L
Sbjct: 636 QAYNVACRMFRRNLIPDV-KLCQKVDNQLA 664
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 133/276 (48%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R +++ +V+ ++ ++ + L D+ L+ E+ K
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK- 227
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD ++Y +L+ C G ++A++LLNEM + + TYT +++ L K+G +EA
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E + + M K V+LDV Y+ + + K + M G+ PD Y+ ++
Sbjct: 288 ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMING 347
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +DEA ++E + + P+ T+ + I LC SG + +F E + + PD
Sbjct: 348 LCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
T L++ L K + A + +K + PNV
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNV 443
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 118/258 (45%), Gaps = 2/258 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ F+ M + FN +L + + Y L+ ++ + PD + +
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELS-EVEPDYFTLNI 98
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ C G A ++++ G + T+T T++ L +G +EA R ++ +G
Sbjct: 99 IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
L +Y + I G+ L+ + ++P+ + Y+ ++ CK+ ++DEA
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+Y + G SP+ T+ + C G ++A + E V+ + PD T +LV+ L
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278
Query: 353 VKKKKIKEAKGVIRTIKK 370
K+ K+KEA+ V+ + K
Sbjct: 279 CKEGKVKEAENVLAVMVK 296
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 2/233 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Y ++A R F M ++G V ++ ++ + + D+ LF+EI +K
Sbjct: 309 LMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQK- 367
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ PD ++Y L+ C SG +L +EM ++G +TY +++ L K G+ + A
Sbjct: 368 NMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRA 427
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+++M+ + + +V + + + G + E ++ G + +Y ++
Sbjct: 428 IALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMING 487
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
CK ++DEA + +E+NGC +A TF I DKA K+ +E +
Sbjct: 488 LCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMI 540
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 47 IYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRS 106
++ ++++ +P Y+ + + L K KR + L E + +LI
Sbjct: 325 VFYTMTQMGVTPDVHCYS--IMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDC 382
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
++G + FD+M + G P VI++N L+ A ++ D+ LF+++ K + P
Sbjct: 383 LCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM-KDQAIRP 441
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLW 226
+ ++ +LL C G ALE ++ KG + TYT ++N L K+G +EA L
Sbjct: 442 NVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQ 501
Query: 227 SEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
S ME G D + + I + D ++ ++L+ EM GL
Sbjct: 502 SRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ F+++ + +++ +L+ +S V LFDE+ + PD I+Y
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDR-GQPPDVITYNN 413
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ + C +G D+A+ L N+M+++ + T+T +L+ L K G + A + ++ KG
Sbjct: 414 LIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG 473
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
L+V Y V I G + L M D G D +++ ++ + + D+A+
Sbjct: 474 YCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAE 533
Query: 293 KVYEGLEENG 302
K+ + G
Sbjct: 534 KLVREMIARG 543
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K V +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGVLIENFCKAGQYDKA 345
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YG+L+++ C +G DK
Sbjct: 286 -LAPTDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSXFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPADAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P+++ FR+
Sbjct: 464 MIENDHLPDSSLFRS 478
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 15/196 (7%)
Query: 95 TQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
T LI S+ ++G D A M L P + L+ ++ YDK L
Sbjct: 289 TDNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKL 348
Query: 155 FDEIPKK---------YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT 205
D++ +K +L P +Y +++ C++G + KA L+ ++ GV+ T
Sbjct: 349 LDKLIEKDIILRPQSTLHLEPS--AYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPT-A 405
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEM 263
T++ ++G+ + L M ++ VD + +AYN + +Y +P K +D M
Sbjct: 406 LNTLIRGHSQEGSPDSXFELLKIMLRRKVDSEKSAYN-SLVQSYLKKNEPADAKAALDSM 464
Query: 264 RDAGLKPDTISYNFLM 279
+ PD+ + +M
Sbjct: 465 IENDHLPDSSLFRSVM 480
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG D A F +M E G + +++NAL+ + ++ L +E+ K PD
Sbjct: 57 RAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK-GYEPDN 115
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS- 227
I+Y +L C G +A + + M ++G V Y +L+ LYK+G EA L+
Sbjct: 116 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKT 175
Query: 228 -EMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA---GLKPDTISYNFLMTCYC 283
+M + V D+ YN I E+ E + +D G PDT++YN ++
Sbjct: 176 MDMADRKVAPDLITYNTLIDGFC--RVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLA 233
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ MDEA+++++ + ++GC+PN T+ + C GN + ++++E PD
Sbjct: 234 RKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVL 293
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+++ L K KK+ +A V+ + K
Sbjct: 294 LCNAVIDMLCKAKKVDDAHKVLEEMSK 320
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
PD ++Y ++ C +G +ALE++ EM KGV TYT +++ L + G +EA+
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCY 282
L+ +M ++G + AYN I + ER +L++EM G +PD I+YN +++
Sbjct: 66 ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IP 340
C+ + EAK+ ++ + G SP+ + + L G +A+ +FK M + P
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
D T L++G + +K EA + + I K + P+ +
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTV 223
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 140/314 (44%), Gaps = 41/314 (13%)
Query: 94 ITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPI 153
IT L L R G A + FD M G V+++N LL A + +
Sbjct: 116 ITYNTILSGLCR----MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWG 171
Query: 154 LFDEIP-KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
LF + ++PD I+Y L+ C +D+A++L ++ KG TVTY ++L
Sbjct: 172 LFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 231
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKEL------------ 259
L ++ N +EAE ++ +M G + A Y++ ++ + G+ R EL
Sbjct: 232 LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291
Query: 260 -----------------------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
++EM G PD ++YN L+ CK ++D+A +++
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 351
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ +NGC+P+ ++ + LC + A +F + +PD T +L++GL K
Sbjct: 352 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 411
Query: 357 KIKEAKGVIRTIKK 370
K+ EAK ++ + +
Sbjct: 412 KLDEAKDLLDVMSE 425
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 40/314 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + D AM+ F + G +++N++L R D+ +F ++
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS- 251
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ +Y ++L HC G+ + LEL EM K + V++ L K ++A
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-----TNTY-------------GGDPERL-------- 256
++ EM K G DV YN+ + TN G P+ +
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371
Query: 257 ----------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ L D M + L PD +++N LM CK +DEAK + + + E+ P+
Sbjct: 372 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPD 431
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
T T ++ LC D+A ++F+ V + D +++ GL ++ K+ +A +
Sbjct: 432 GVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFK 491
Query: 367 TIKK---KFPPNVL 377
++ K +F P+V+
Sbjct: 492 SMVKSDGEFSPDVV 505
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGD 252
M KG E VTY+T+++ L K G EA + EM +KGV+ DVA Y + + G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
+ EL +M + G +T++YN L+ CK+E ++ A K+ E + G P+ T+ T
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI---K 369
+ LC G +A + F PD L++ L K+ K+ EA G+ +T+
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 370 KKFPPNVL 377
+K P+++
Sbjct: 181 RKVAPDLI 188
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 39/307 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G + +++M E V+ NA++ +++ D + +E+ K
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM-SKI 321
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++Y +LL C + DKA EL + M + G V+Y+ VLN L K +A
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 381
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ M ++ + DV +N+ + G + K+L+D M + + PD ++ LM
Sbjct: 382 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHG 441
Query: 282 YCKNEMMDEAKKVYEGLEENGC-------------------------------------S 304
C+++ DEA ++++ + E G S
Sbjct: 442 LCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFS 501
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ T + L +G D+A F++ PD+ L+ GL K+ + +A +
Sbjct: 502 PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Query: 365 IRTIKKK 371
+ +K+K
Sbjct: 562 TQAMKEK 568
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 47/301 (15%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+ L++Y +++ SP + + L K+K+ D ++E KI P +
Sbjct: 275 RCLELYEEMTEKRFSP--DVLLCNAVIDMLCKAKKVDDAHKVLEEMS---KIGAVPDVVT 329
Query: 103 ---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L+ + + D A F M + G ++S++ +L ++ +LFD +
Sbjct: 330 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 389
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
++ L PD +++ +L+ C +G D+A +LL+ M V VT TT+++ L +
Sbjct: 390 ER-KLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-----------------------------TY- 249
+EA RL+ M +KG DV +N+ + TY
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508
Query: 250 --------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
G ++ + +M +G PD ++YN LM K +A ++ + ++E
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568
Query: 302 G 302
G
Sbjct: 569 G 569
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 5/203 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA +++S++ + +P Y+ + + L K+ + D L + +
Sbjct: 344 DKAHELFSTMVDNGCAPDIVSYS--VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L+ +AG D A D M E ++ L+ R + D+ LF + +K
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT--TVTYTTVLNCLYKQGNA 219
++ D + + ++L C G +AL M E + VTYTT++N L + G
Sbjct: 462 GTVA-DVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRV 520
Query: 220 EEAERLWSEMEKKGVDLDVAAYN 242
++A + +M G D AYN
Sbjct: 521 DQAVDYFQQMTGSGCAPDYVAYN 543
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ G+ D A+R ++ +L P + + N +L R+R V LF+ +P
Sbjct: 139 LLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP--- 195
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P+ ++ +++ C G +A L M+ G VTY ++++ K G EE
Sbjct: 196 --APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEV 253
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E L SEM K G DV YN I N + G E+ EM+ G+ + ++ + +
Sbjct: 254 ELLVSEMRKSGCAADVVTYNALI-NCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVD 312
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK ++ EA K++ + G PN T+ + + C +G D A + E V +P
Sbjct: 313 AFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 372
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+ T ++V+GL K+ K+ A V+ +++
Sbjct: 373 NVVTYTVMVDGLCKEGKVAVADDVLSLMER 402
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 130/264 (49%), Gaps = 4/264 (1%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEI 158
L + ++ + G+ AM+ F QM G + ++ +L+ C RL D + +L DE+
Sbjct: 307 LSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI-VLLDEM 365
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ L P+ ++Y +++ C G A ++L+ ME GV+ + YTT+++ + N
Sbjct: 366 VHQ-GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKN 424
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNF 277
+E A L +EM+ KG++LDV+ Y I + K L+ +M D GL+P+T+ Y
Sbjct: 425 SERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTT 484
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+M + K EA + + ++G PN T+ I LC +G+ +A F + +
Sbjct: 485 IMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELG 544
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEA 361
P+ L++G K + +A
Sbjct: 545 LDPNVQVYTTLIDGFCKIGSLSKA 568
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 53/304 (17%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP-- 159
+LI YG+ G + +M + G V+++NAL+ ++ +K F E+
Sbjct: 239 SLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRL 298
Query: 160 --------------------------------KKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ + P++ +Y L+ C +G D A
Sbjct: 299 GVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDA 358
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ LL+EM ++G+ VTYT +++ L K+G A+ + S ME+ GV + Y I
Sbjct: 359 IVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHG 418
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + ER +L++EM++ G++ D Y L+ CK + +DEAK + +++ G PN
Sbjct: 419 HFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPN 478
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKES---VMVHKIPDFN------TVKLLVEGLVKKKK 357
+ T + D +K KES ++HKIPD T L++GL K
Sbjct: 479 TVIYTTIM---------DAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGS 529
Query: 358 IKEA 361
I EA
Sbjct: 530 IYEA 533
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 2/221 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A +MD+ G + + + ++ A ++ + L +IP L P+ ++Y
Sbjct: 460 LDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDS-GLQPNVVTYC 518
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C +GS +A+ ++M G++ YTT+++ K G+ +A L +EM K
Sbjct: 519 ALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDK 578
Query: 233 GVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
G+ LD Y I + GD + L +M + GL+ D Y ++ +C MM EA
Sbjct: 579 GMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEA 638
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ V + G +P+ T + I GN ++A + E
Sbjct: 639 RGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNE 679
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 105/199 (52%), Gaps = 4/199 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ ++ +AG A+ ++ + G +V+++ AL+ C +Y+ + FD++ ++
Sbjct: 485 IMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAIS-HFDKM-RE 542
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P+ Y L+ C GS KA+ L+NEM +KG+ + V YT++++ KQG+ +
Sbjct: 543 LGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQG 602
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMT 280
A L ++M + G+ LD+ Y I+ + + + ++ EM G+ PD +YN L+
Sbjct: 603 AFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662
Query: 281 CYCKNEMMDEAKKVYEGLE 299
Y K M+EA + +E
Sbjct: 663 KYQKLGNMEEASSLQNEME 681
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 124/302 (41%), Gaps = 41/302 (13%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD--EIP 159
+L+ +AG D A+ D+M G +V+++ ++ + KV + D +
Sbjct: 344 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKE---GKVAVADDVLSLM 400
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV------------------ 201
++ + +++ Y L+ H + +S++AL+LLNEM+NKG+E+
Sbjct: 401 ERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKL 460
Query: 202 -----------------TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
TV YTT+++ +K G EA L ++ G+ +V Y
Sbjct: 461 DEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCAL 520
Query: 245 ITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I G D+MR+ GL P+ Y L+ +CK + +A + + + G
Sbjct: 521 IDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGM 580
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
S + + + I G+ A+ + + + D + G ++EA+G
Sbjct: 581 SLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARG 640
Query: 364 VI 365
V+
Sbjct: 641 VL 642
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 2/249 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
+ A+ ++M G V + L++ + + D+ L ++ L P+ + Y
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKM-DDCGLRPNTVIYTT 484
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
++ + +G +A+ LL+++ + G++ VTY +++ L K G+ EA + +M + G
Sbjct: 485 IMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELG 544
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+D +V Y I G + L++EM D G+ D + Y L+ + K + A
Sbjct: 545 LDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAF 604
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + E G + + +I C +A V E + PD L+
Sbjct: 605 ALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKY 664
Query: 353 VKKKKIKEA 361
K ++EA
Sbjct: 665 QKLGNMEEA 673
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 137/300 (45%), Gaps = 31/300 (10%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+AG A + F + E G V ++N L+ + DKV + E+ +K
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Query: 163 N---LSPD---------------------------KISYGLLLKSHCDSGSSDKALELLN 192
+S D +I+Y L+ + +G D+A++LL
Sbjct: 493 GECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLE 552
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGD 252
M+ T VTYTT+++ L K G +EA L EMEK+G + V Y+ + + Y D
Sbjct: 553 VMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRD 612
Query: 253 PERLK-ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E L DEM G D +Y+ ++ C CK++ +D+A V+ ++E G P ++
Sbjct: 613 QEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYK 672
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
T + L D A ++F E +PD ++V GLVK ++ EA ++ ++K +
Sbjct: 673 TLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ 732
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 142/306 (46%), Gaps = 2/306 (0%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
L ++RLA ++ + ++ + + L +L+R++G A+ F+QM
Sbjct: 187 LMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSF 246
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
G S +N +L + Y I+F ++ ++ + PD ++ + + S SG D
Sbjct: 247 GCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL-GQFRIQPDAQTFRIFVHSFNRSGRLDP 305
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
A E + EM G++ T+T +++ L K GN +EA + ++ M+ +V Y +
Sbjct: 306 AAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVN 365
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E E+ EM++ PD I+YN L+ K D A +++ +++ G P
Sbjct: 366 GLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVP 425
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ I L +G +A+++F + +PD T L++ L K ++ + +I
Sbjct: 426 NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAII 485
Query: 366 RTIKKK 371
+ + +K
Sbjct: 486 KEMVEK 491
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL I++ + + +S V + ++ V L KS R + L++S KN +
Sbjct: 685 DFALQIFNELQE--SSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ G++G + A F +M E G V+++ +L+ + I+F + KK
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Query: 162 YNLSPDKISYGLLL-------------------------------KSHCDS----GSSDK 186
PD ++Y L+ S DS G D+
Sbjct: 803 -RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDR 861
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
ALEL EM+ + VTY +L+ L K G AE+L EMEK G D+ YN+ I
Sbjct: 862 ALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + + M++ G+ PD I++ L+ K + + EA ++++ +EE G +P
Sbjct: 922 GVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNP 981
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+ T+ I L +G +A +F E + +PD T+ ++
Sbjct: 982 SVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 154/355 (43%), Gaps = 45/355 (12%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D+ALD++ + + P+ Y +TL+ S D KI
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNY------------------KTLLSSLVKDEKI----- 684
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
D A++ F+++ E +N ++ +S D+ L D +
Sbjct: 685 --------------DFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM- 729
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K N+ PD +Y LL SG ++A + +M +G E V YT++++ L K G
Sbjct: 730 KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYN 276
A ++ M KK DV Y+ I + G R++E + G P+ Y+
Sbjct: 790 SHALIIFRAMAKKRCVPDVVTYSSLIDSL--GKEGRVEEAYYFFENSISKGCTPNVGVYS 847
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ + K M+D A +++E ++ C PN T+ + L +G + A K+ +E V
Sbjct: 848 SLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV 907
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELGLV 390
+PD T +L++G+ K + EA+ + +K+K P+V+ + + E LG V
Sbjct: 908 GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVI-TFTSLIESLGKV 961
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 33/262 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + ++G D A + F+ M L +V+++ L+ ++ ++ +F E+ K+
Sbjct: 328 LIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM-KEN 386
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N SPD I+Y L+ +G +D A L EM+++G+ TY +++ L K G EA
Sbjct: 387 NCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEA 446
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAG----LKPDT----- 272
+L+ +++++G DV YN I GG +++ +I EM + G + D+
Sbjct: 447 WQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHE 506
Query: 273 ----------------------ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
I+YN LM+ + N +DEA K+ E ++++ C P T+
Sbjct: 507 GTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTY 566
Query: 311 RTWIYHLCGSGNFDKAYKVFKE 332
T + L +G D+A + +E
Sbjct: 567 TTLVDGLGKAGRLDEAVSLLRE 588
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 3/217 (1%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LL++ + + ALE+ N+M++ G +T Y VL L K G A ++ ++ +
Sbjct: 223 LLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR 282
Query: 234 VDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ D + + + + G + E I EM +G+ P ++ L+ K+ +DEA
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
K + G++ CSPN T+ T + L +G ++A +VF E + PD L++GL
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNVLRAWKKVEEELG 388
K + A G+ + +K + PN LR + + LG
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPN-LRTYNIMISVLG 438
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 7/280 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ Y + G + A ++M G V+ +N+L+ R+ D + D + K+
Sbjct: 179 SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTM-KR 237
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ ++Y + + +C + D A L EM KGV VT + ++ L K G E
Sbjct: 238 DGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSE 297
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A L+ EMEK G + Y + I +R E L+ E+ G+ D I Y L
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTL--AKAQRGNESLSLLGEVVSRGVVMDLIMYTAL 355
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
M CK +DEAK ++ + +PN T+ I LC +GN D A +V E
Sbjct: 356 MDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSI 415
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ T ++ GLVK+ + +A +R +K++ PNV+
Sbjct: 416 SPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVV 455
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG D A + +M+E +V++F++++ + K E+ K+
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREM-KER 448
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++YG ++ + AL++ +EM +GVEV +++N L K G E+A
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKA 508
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E L+ EM ++GV LD Y I + G P K + E+ + L PD + YN +
Sbjct: 509 EALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFK-VGQELTEKNLLPDAVVYNVFIN 567
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C C EA+ E ++ G P+ T+ T I G KA K+ P
Sbjct: 568 CLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKP 627
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+ T L+ GL + +++AK ++ + F P L
Sbjct: 628 NLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSL 665
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 136/276 (49%), Gaps = 12/276 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS---KRFSDIETLIESHKNDPKITQEP 98
+KA + + +S SP S LT RR+ ++ R SD+ I + + +
Sbjct: 646 EKAKYLLNEMSSSGFSPTS------LTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADI 699
Query: 99 YLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+ N L+R GM AM ++M G I+FNAL+ +S D +D+
Sbjct: 700 TVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQ 759
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + +SP+ ++ LL +G ++ +LNEM+ +G+E + +TY ++ KQ
Sbjct: 760 M-LYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQS 818
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
N EA RL+ EM KG V+ YN I++ + G + KEL +EM++ G+ P + +Y+
Sbjct: 819 NKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYD 878
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
L++ + K E +K + ++E G SP+ T +
Sbjct: 879 ILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 142/303 (46%), Gaps = 4/303 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K RFS+ L + C LI + +A + ++ ++ G
Sbjct: 286 VGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGV 345
Query: 129 PRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+I + AL+ + C ++ D+ +F N +P+ ++Y +L+ + C +G+ D A
Sbjct: 346 VMDLIMYTALMDWLCKEGKI-DEAKDMFRHALSD-NHTPNGVTYTVLIDALCKAGNVDGA 403
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
++L+EME K + VT+++++N L K+G +A EM+++G+D +V Y I
Sbjct: 404 EQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDG 463
Query: 248 TYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
++ E ++ EM G++ + + L+ KN +++A+ ++ + E G +
Sbjct: 464 SFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLD 523
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
+ T I L +GN A+KV +E + +PD + + L K KEA+ +
Sbjct: 524 HVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLE 583
Query: 367 TIK 369
++
Sbjct: 584 EMQ 586
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 11/279 (3%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG + A ++M G + ++ +L AC++ R D + + E
Sbjct: 635 LIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLI-LEIHEWMMNA 693
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L D Y L++ C +G + KA+ +L EM +G+ T+T+ ++ +K G+ + A
Sbjct: 694 GLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNA 753
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKE---LIDEMRDAGLKPDTISYNF 277
+ +M G+ +VA +N + GG R+ E +++EM+ G++P ++Y+
Sbjct: 754 FSTYDQMLYHGISPNVATFNTLL----GGLESAGRIGESDMVLNEMKKRGIEPSNLTYDI 809
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+T Y K EA ++Y + G P +T+ I G +A ++F E
Sbjct: 810 LVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRG 869
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
+P T +LV G K + E + ++ +K+K F P+
Sbjct: 870 VLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPS 908
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 45/310 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILF---DEI 158
+L+ + G + A F +M+E G +++ L+ ++ +P F E+
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKT---GNLPAAFKVGQEL 550
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+K NL PD + Y + + C G S +A L EM++ G++ VTY T++ ++G
Sbjct: 551 TEK-NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGK 609
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTIS--- 274
+A +L + M++ + ++ Y+ I + G E+ K L++EM +G P +++
Sbjct: 610 TAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRR 669
Query: 275 --------------------------------YNFLMTCYCKNEMMDEAKKVYEGLEENG 302
YN L+ C N M +A V E + G
Sbjct: 670 VLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRG 729
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEA 361
+P+ TF I SG+ D A+ + + ++ H I P+ T L+ GL +I E+
Sbjct: 730 IAPDTITFNALILGHFKSGHLDNAFSTYDQ-MLYHGISPNVATFNTLLGGLESAGRIGES 788
Query: 362 KGVIRTIKKK 371
V+ +KK+
Sbjct: 789 DMVLNEMKKR 798
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 5/260 (1%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
++M G +++N ++ A +R K L + + K+ ++ P+ I+Y L+
Sbjct: 582 LEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM-KRSSIKPNLITYSTLIVGLF 640
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
++G+ +KA LLNEM + G T++T+ VL + ++ + M G+ D+
Sbjct: 641 EAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADIT 700
Query: 240 AYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN VR+ Y G + +++EM G+ PDTI++N L+ + K+ +D A Y+
Sbjct: 701 VYNTLVRVL-CYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQ 759
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK-K 356
+ +G SPN TF T + L +G ++ V E P T +LV G K+
Sbjct: 760 MLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSN 819
Query: 357 KIKEAKGVIRTIKKKFPPNV 376
K++ + + K F P V
Sbjct: 820 KVEAVRLYCEMVGKGFLPKV 839
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGV--EVTTVTYTTVLNCLYKQGNAEEAER 224
D ++ +L C G D+A L M G + V + ++++ K G+ E A
Sbjct: 136 DAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFA 195
Query: 225 LWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+ M+ +GV +DV YN + G+ + ++++D M+ G++P+ ++Y + YC
Sbjct: 196 VAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYC 255
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ +D+A +YE + G P+ T + LC G F +AY +F+E + P+
Sbjct: 256 RRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHV 315
Query: 344 TVKLLVEGLVKKKKIKEA 361
T +L++ L K ++ E+
Sbjct: 316 TYCMLIDTLAKAQRGNES 333
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 165 SPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
S D +SY +++ + G LL EM +GV VT TVL L + G + A
Sbjct: 100 SVDTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAA 158
Query: 225 LWSEMEKKGV--DLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L M + G LDV +N + + Y GD E + + M+ G+ D + YN L+
Sbjct: 159 LAEVMVRGGGIGGLDVVGWN-SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVA 217
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ +D A+ + + ++ +G PN T+ +I C D A+ +++E V +P
Sbjct: 218 GLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP 277
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
D T+ LV GL K + EA + R ++K
Sbjct: 278 DVVTLSALVGGLCKDGRFSEAYALFREMEK 307
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP--NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C E M EA+ + + + + +P N+ R H C SGN D A V K + +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIIMRLISSH-CKSGNLDAAADVLKAMIRLSVP 323
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
+ LL+E K + +A
Sbjct: 324 TEAGHYGLLIENFCKAGQYDKA 345
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YGLL+++ C +G DK
Sbjct: 286 -LAPTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y +++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNSMIEYLCNNGQASKAETLVRQLMKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNLLVQSYLKKNEPXDAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 132/313 (42%), Gaps = 51/313 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +G + A R F+ M V+++N ++ R + ++ F E+ K
Sbjct: 156 MIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGR 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ P ++Y L+K + D AL L+ EM+ G++ +TY+T+L L EA
Sbjct: 215 NIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEA 274
Query: 223 ERLWSEMEKKGV-------------------DLDVAA-----------------YNVRIT 246
+ EM K + +LD AA Y + I
Sbjct: 275 RVILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIE 334
Query: 247 N-TYGGDPERLKELIDEM--RDAGLKPDTI------SYNFLMTCYCKNEMMDEAKKVYEG 297
N G ++ +L+D++ +D L+P + +YN ++ C N +A+ +
Sbjct: 335 NFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNSMIEYLCNNGQASKAETLVRQ 394
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF--NTVKLLVEGLVKK 355
L + G + T T I G+ D A+++ K +M+ + D + LLV+ +KK
Sbjct: 395 LMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLK--IMLRRKVDSEKSAYNLLVQSYLKK 451
Query: 356 KKIKEAKGVIRTI 368
+ +AK + ++
Sbjct: 452 NEPXDAKAALDSM 464
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 131/263 (49%), Gaps = 7/263 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ + F++M G RSV S+ AL+ + R+ Y+ V + E KK
Sbjct: 149 MISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSYGRNGKYE-VSLELLERMKKE 207
Query: 163 NLSPDKISYGLLLKSHCDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP ++Y ++ S C G D L L EM ++G++ VTY T+L +G +
Sbjct: 208 RVSPSILTYNTVINS-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGD 266
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
EAE ++ M + GV D+ Y + +T+G +++ EL+ EM G P+ SYN L
Sbjct: 267 EAEMVFRTMNEGGVVPDITTYTY-LVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVL 325
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ Y + +++A V+ ++E GC PNA T+ + G +D+ ++F E + +
Sbjct: 326 LEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNT 385
Query: 339 IPDFNTVKLLVEGLVKKKKIKEA 361
PD T L++ + KE
Sbjct: 386 EPDAATYNTLIDVFGEGGYFKEV 408
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G +K ++ EM GV + +YT ++N
Sbjct: 129 LFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSY 188
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPD 271
+ G E + L M+K+ V + YN I + G D E L L EMR G++PD
Sbjct: 189 GRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPD 248
Query: 272 TISYNFLMTCYCKNE-MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN-FDKAYKV 329
++YN L+ C C N + DEA+ V+ + E G P+ TT+ T++ G N DK ++
Sbjct: 249 IVTYNTLL-CACSNRGLGDEAEMVFRTMNEGGVVPDITTY-TYLVDTFGKLNRLDKVSEL 306
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
KE +P+ ++ +L+E + I++A GV R +++
Sbjct: 307 LKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQE 347
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 143/333 (42%), Gaps = 9/333 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+K DI+ + H S S ++ + ++ ++ L+E K +
Sbjct: 160 EKCSDIFEEMGAHGVS--RSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYN 217
Query: 102 NLIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I S + G+ ++ + F +M G ++++N LL AC+ L D+ ++F + +
Sbjct: 218 TVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNE 277
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD +Y L+ + DK ELL EM + G +Y +L + GN E
Sbjct: 278 G-GVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIE 336
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
+A ++ M++ G + Y++ + YG G + ++EL EM+ + +PD +YN L
Sbjct: 337 DATGVFRLMQEAGCVPNAETYSI-LLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTL 395
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF-DKAYKVFKESVMVH 337
+ + + E ++ + E PN T+ I+ CG G D A K+
Sbjct: 396 IDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFA-CGKGGLHDDAKKILLHMSEKG 454
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
IP ++E + +EA + T+ +
Sbjct: 455 MIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNE 487
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 8/313 (2%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L + + S++ + S N P+I+ L + +Y + G + A F M E G
Sbjct: 293 TFGKLNRLDKVSELLKEMASTGNVPEISSYNVL---LEAYARIGNIEDATGVFRLMQEAG 349
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +++ LL + YD+V LF E+ K N PD +Y L+ + G +
Sbjct: 350 CVPNAETYSILLGLYGKHGRYDEVRELFLEM-KVSNTEPDAATYNTLIDVFGEGGYFKEV 408
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+ L ++M + VE TY ++ K G ++A+++ M +KG+ AY +
Sbjct: 409 VTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYT-GVIE 467
Query: 248 TYGGDPERLKELI--DEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YG + L+ + M + G KP +YN L+ + + + E + + + + G +
Sbjct: 468 AYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVAR 527
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+F I G F++A K + E +PD T++ ++ + E+
Sbjct: 528 ERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQF 587
Query: 366 RTIKKK-FPPNVL 377
+ IK PNV+
Sbjct: 588 QEIKASGILPNVM 600
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ YG+ G +D F +M T ++N L+ + +V LF ++ ++
Sbjct: 360 LLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEE- 418
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ P+ +Y L+ + G D A ++L M KG+ ++ YT V+ + EEA
Sbjct: 419 NVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEA 478
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M + G + YN I GG + + ++ +M D G+ + S+N ++
Sbjct: 479 LVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEG 538
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + +EA K Y +E++ P+ T + C +G D++ + F+E +P+
Sbjct: 539 FRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPN 598
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+++ K + EA
Sbjct: 599 VMCYCMMLAVYAKSDRWNEA 618
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I +YGQA M++ A+ T + M+E+G+ ++ ++N L++ R LY + + ++
Sbjct: 464 GVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKM-GD 522
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ ++ ++ S+ +++ G ++A++ EME + T VL+ G +E
Sbjct: 523 FGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDE 582
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMT 280
+ + E++ G+ +V Y + + D EL+DEM L + + ++
Sbjct: 583 SVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM----LTNRASNIHQVIG 638
Query: 281 CYCKNEMMDEA-----KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
K + D++ + V++ L GC + T + L G ++A +V E+
Sbjct: 639 QMIKGDFDDDSNWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAVRVLGEATK 698
Query: 336 VHKIPDF 342
P+
Sbjct: 699 RGHFPEL 705
>gi|242091782|ref|XP_002436381.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
gi|241914604|gb|EER87748.1| hypothetical protein SORBIDRAFT_10g001520 [Sorghum bicolor]
Length = 546
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 128/263 (48%), Gaps = 1/263 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
++R F + + S SFNALL + +R LF P K ++P+ +S +LL
Sbjct: 152 SLRLFLSLPSFNSRPSTRSFNALLHSLVSARRLRLAAALFRAAPTKLYITPNLVSCNILL 211
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
K G D AL++L+EM G+ VTYTTVL +G+ E A++L+ ++ G
Sbjct: 212 KGLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDLEGAQQLFDDIVASGRR 271
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D Y V + + G + ++DEM AG+KP+ ++Y+ ++ CK EA +
Sbjct: 272 PDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVIEACCKEGKSIEACDL 331
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ G P+ + LC G +A +++++ V PD V L+ L K
Sbjct: 332 TREMLGAGYVPDTPLCAKVVDVLCQDGKAGEANEIWRQMVKKSVPPDNTVVSTLIYWLCK 391
Query: 355 KKKIKEAKGVIRTIKKKFPPNVL 377
++EA+G+ +++ F P++L
Sbjct: 392 NGMVQEARGLFDELERGFVPSLL 414
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 131/283 (46%), Gaps = 10/283 (3%)
Query: 94 ITQEPYLCNLIRSYGQAGM--FDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
IT CN++ G GM D A++ D+M G V+++ +L A C + L +
Sbjct: 200 ITPNLVSCNILLK-GLVGMGDLDAALKVLDEMTGWGIVPDVVTYTTVLTAYCAKGDL-EG 257
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
LFD+I PD Y +L+ +C G A +++EME GV+ VTY+ V+
Sbjct: 258 AQQLFDDIVAS-GRRPDATMYTVLVDGYCHRGKLQDAARIMDEMEAAGVKPNEVTYSVVI 316
Query: 211 NCLYKQGNAEEAERLWSEMEKKGV--DLDVAAYNVRITNTYGGDPERLKELIDEMRDAGL 268
K+G + EA L EM G D + A V + G E E+ +M +
Sbjct: 317 EACCKEGKSIEACDLTREMLGAGYVPDTPLCAKVVDVLCQDGKAGEA-NEIWRQMVKKSV 375
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
PD + L+ CKN M+ EA+ +++ LE G P+ T+ + I LC +G +A +
Sbjct: 376 PPDNTVVSTLIYWLCKNGMVQEARGLFDELER-GFVPSLLTYNSLIIGLCENGELQEAGR 434
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
V+ + V P+ T + L++G K K E + + + K
Sbjct: 435 VWDDMVERRYEPNAMTYEALIKGFCKIGKSNEGYALFKEMVAK 477
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 139/288 (48%), Gaps = 14/288 (4%)
Query: 93 KITQEPYLCNLIRS-YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
KI+ PY N++ S Y ++G D + M+ LG + +S+N L+ C + L
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
+ + + K L P+ +++ L+ C + +A ++ EM+ V TVTY T++
Sbjct: 293 LKL--KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRDA 266
N +QG+ E A R + +M G+ D+ YN I +G + + + E+
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI---FGLCKQAKTRKAAQFVKELDKE 407
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
L P++ +++ L+ C + D ++Y+ + +GC PN TF + C + +FD A
Sbjct: 408 NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGA 467
Query: 327 YKVFKESVMVHKIP-DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKF 372
+V +E V IP D TV + GL + K + K +++ ++ KKF
Sbjct: 468 SQVLREMVR-RSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 7/278 (2%)
Query: 101 CNLIRS--YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
CN S GQ G D A+R + +M + + N ++ RS DK L ++
Sbjct: 206 CNAYMSSLLGQ-GRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
++ +SY L+ HC+ G AL+L N M G++ VT+ T+++ +
Sbjct: 265 -ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK 323
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYN 276
+EA +++ EM+ V + YN I N Y GD E ++M G++ D ++YN
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLI-NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L+ CK +A + + L++ PN++TF I C N D+ ++++K +
Sbjct: 383 ALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRS 442
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
P+ T +LV + + A V+R + ++ P
Sbjct: 443 GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIP 480
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L +++ F +A TF QM + G +V S NA + + D + E+ ++
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM-RRC 232
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ + +++ +C SG DK +ELL +ME G T V+Y T++ ++G A
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+L + M K +GL+P+ +++N L+ +
Sbjct: 293 LKLKNMMGK----------------------------------SGLQPNVVTFNTLIHGF 318
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ + EA KV+ ++ +PN T+ T I G+ + A++ +++ V D
Sbjct: 319 CRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDI 378
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPN 375
T L+ GL K+ K ++A ++ + K+ PN
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 20/218 (9%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
F+ALL++ R D P +FD L K+ A + +M
Sbjct: 154 FDALLYS---YRECDSTPRVFDS----------------LFKTFAHLKKFRNATDTFMQM 194
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDP 253
++ G T + ++ L QG + A R + EM + + + N+ ++ G
Sbjct: 195 KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL 254
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
++ EL+ +M G + +SYN L+ +C+ ++ A K+ + ++G PN TF T
Sbjct: 255 DKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTL 314
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
I+ C + +A KVF E V+ P+ T L+ G
Sbjct: 315 IHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 169/350 (48%), Gaps = 28/350 (8%)
Query: 40 DPDKALDIYSSVSKHYAS-----PVSSRYAQDL--------TVRRLAKSKRFSDIETLIE 86
+P K L +YS+V HY + P + +DL T RR+ S F+ + L
Sbjct: 57 NPTKKLHLYSAVI-HYLTGAKVYPTARCLTKDLIQTLLQSCTPRRV-NSLVFNALSQL-R 113
Query: 87 SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR 146
K +P + LI ++ + G+ D A+R + + +G +V + NALL +
Sbjct: 114 GSKFNPSV-----FGVLIIAFSEVGLVDEALRVYLK---VGAFPAVQACNALLNGLLKKS 165
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
+D + L++ + + L P ++Y +L+ + C G +A L++EM KG+E T V Y
Sbjct: 166 SFDIMWELYNNMVSR-RLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIY 224
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMR 264
TT+++ L + EAE ++ +M+ GV ++ YNV + + Y + ++ L M
Sbjct: 225 TTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNV-LMDGYCKTANVKQALHLYQGML 283
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
D GL+P+ +++ L+ CK + A++ + + + G PN F + I +GN
Sbjct: 284 DDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCS 343
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPP 374
+A + E PD T +L++ + ++EA +++ ++K+ P
Sbjct: 344 EATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVP 393
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 107/214 (50%), Gaps = 4/214 (1%)
Query: 122 QMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+M + G +V+ + L+ C+ S+L + +F ++ K + P+ +Y +L+ +C
Sbjct: 211 EMVKKGIEPTVVIYTTLIHGLCSESKLMEAES-MFRQM-KDSGVFPNLYTYNVLMDGYCK 268
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
+ + +AL L M + G++ VT+ +++ L K A R + +M K GV +V
Sbjct: 269 TANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVV 328
Query: 241 YNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+N I + G+ +L+ EM + PD +Y+ L+ C+ ++EA + + +E
Sbjct: 329 FNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRME 388
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+ G N+ + + I C GN +KA ++FK +
Sbjct: 389 KEGVPANSVVYNSLIDGYCKEGNMEKALEIFKAT 422
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 29/194 (14%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A R F QM + G +V+ FN+L+ +++ + L E+ +K+ +SPD +Y +L+
Sbjct: 310 ARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEM-EKFKISPDVFTYSILI 368
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
K+ C G+ ++A ++L ME +GV +V Y ++++ K+GN E+A ++
Sbjct: 369 KNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIF--------- 419
Query: 236 LDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
+ + +MR GL+PD ++Y ++ + + M + ++
Sbjct: 420 -------------------KATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLH 460
Query: 296 EGLEENGCSPNATT 309
+ + G PN T
Sbjct: 461 ADMIKMGIVPNEVT 474
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 114/261 (43%), Gaps = 8/261 (3%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F QM + G ++ ++N L+ ++ + L+ + L P+ +++G+L+ + C
Sbjct: 244 FRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDD-GLQPNVVTFGILIDALC 302
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
A +M GV V + ++++ K GN EA L EMEK + DV
Sbjct: 303 KVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVF 362
Query: 240 AYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG- 297
Y++ I N G E +++ M G+ +++ YN L+ YCK M++A ++++
Sbjct: 363 TYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKAT 422
Query: 298 -----LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ NG P+A + + + + + + + + +P+ T +++ G
Sbjct: 423 KFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGY 482
Query: 353 VKKKKIKEAKGVIRTIKKKFP 373
+K A R + + P
Sbjct: 483 QDNGYLKSALWCSRDLTESCP 503
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M + +V ++N ++ + + R + LF E+ K
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK- 230
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ + C+ LLNEM + + V++ TV++ L K+G EA
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ +M ++GV+ +V Y + + + + ++ D M G P+ ISYN L+
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK + +D+A ++ + P+ T+ T I+ LC A +F E V +IP+
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++L++ L K + + EA +++ I+
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLKAIE 438
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 149/358 (41%), Gaps = 43/358 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP-KITQEPY- 99
D A+ ++ + + P + + + LT +AK K S + +L SH+ D I Y
Sbjct: 43 DGAISSFNRMLRMQPPPSTVDFNKLLT--SIAKMKHHSTLLSL--SHQMDSFGIPPNIYT 98
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L LI S+ A ++ +LG +F L+ + LFD++
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ PD ++YG L+ C G++ A+ LL M K + Y T+++ L K
Sbjct: 159 GE-GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRIT------------------------------NTY 249
EA L+SEM KG+ D+ YN I NT
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Query: 250 ------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G +++D+M G++P+ ++Y LM +C MDEA KV++ + GC
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
PN ++ T I C DKA +F E IPD T L+ GL +++++A
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 395
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A++ FD M G +VIS+N L+ + + DK LF E+ ++ L PD ++Y
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ-ELIPDTVTYS 380
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ C A+ L +EM VTY +L+ L K EA L +E
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440
Query: 233 GVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+D D+ N+ I G+ E ++L + GL+PD +Y+ ++ C+ ++DEA
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
K++ ++ENGC+ N + T + +A ++ +E V D +T+ L V+
Sbjct: 501 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560
Query: 352 LVKKKKIKEAKGVIR 366
L + K ++R
Sbjct: 561 LSDDGLDQSLKQILR 575
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 143/353 (40%), Gaps = 52/353 (14%)
Query: 50 SVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRS 106
S+ H+ S +R+ +KS F+ I+ I S ++ P + L+ S
Sbjct: 19 SLLAHFLSLSHNRFH--------SKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTS 70
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS- 165
+ + QMD G P ++ + + L+ + ++V F + K L
Sbjct: 71 IAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH---LNRVGFAFSVLAKILKLGH 127
Query: 166 -PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAER 224
PD ++ L++ G +AL L ++M +G VTY T++N L K GN A R
Sbjct: 128 QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187
Query: 225 LWSEMEKKGVDLDVAAYNVRITN------------------TYGGDPE------------ 254
L M +K +V AYN I + T G P+
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247
Query: 255 ------RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+ L++EM D+ + PD +S+N ++ CK + EA V + + + G PN
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ + C D+A KVF V +P+ + L+ G K ++I +A
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 130/269 (48%), Gaps = 15/269 (5%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F +M G + ++N+L+ A + V L +E+ + PD +S+ ++
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPDVVSFNTVV 278
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN--CLYKQGNAEEAERLWSEMEKKG 233
+ C G +A +++++M +GVE VTYT +++ CL + +EA +++ M KG
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE--MDEAVKVFDTMVCKG 336
Query: 234 VDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+V +YN I N Y +R+ + L EM L PDT++Y+ L+ C E + +
Sbjct: 337 CMPNVISYNTLI-NGYC-KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 394
Query: 291 AKKVYEGLEENGCS--PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
A ++ E CS PN T+R + +LC + +A + K + PD +
Sbjct: 395 AIALFH--EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIA 452
Query: 349 VEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
++G+ + +++ A+ + + K P+V
Sbjct: 453 IDGMCRAGELEAARDLFSNLSSKGLQPDV 481
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 146/300 (48%), Gaps = 12/300 (4%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI +AG A+ + +M E G +V ++ L+ A S + LF E+ ++
Sbjct: 260 NLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRER 319
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
P+ +Y +L+ C G D+AL++LNEM KGV + V + ++ K+G E+
Sbjct: 320 -GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + ME K V +V YN I G +R L+++M ++ L PD ++YN L+
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C+ ++D A +++ + +G SP+ TF ++ LC G +A+++ + H
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKA 498
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV---------LRAWKKVEEELGLV 390
+ + L++G K KI+ A + R + ++ PN LR KV++ + LV
Sbjct: 499 NEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLV 558
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G D A++ ++M E G SV+ FNAL+ + C R + D V +L KK
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ +Y L+ C S D+A+ LLN+M + VTY T+++ L + G +
Sbjct: 391 --VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDS 448
Query: 222 AERLWSEMEKKGVDLDVAAYNV-RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL+ M + G D +N + G ++++ +++ +K + +Y L+
Sbjct: 449 ASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALID 508
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK ++ A +++ + C PN+ TF I L G A + ++ P
Sbjct: 509 GYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKP 568
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+T +LVE ++K+ A ++ R I + PNV+
Sbjct: 569 TLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVV 606
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 43/297 (14%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQM-DELGTPR 130
L + R + ++ES K E LI Y +AG +HA F +M E P
Sbjct: 475 LCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPN 534
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
S I+FN ++ + +L +++ K +++ P +Y +L++ D+A E+
Sbjct: 535 S-ITFNVMIDGLRKEGKVQDAMLLVEDMAK-FDVKPTLHTYNILVEEVLKEYDFDRANEI 592
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
LN + + G + VTYT + QG EEAE + +++ +GV LD YN+ I N YG
Sbjct: 593 LNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLI-NAYG 651
Query: 251 --GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK--------------- 293
G + ++ M G +P ++Y+ LM K+ ++++ KK
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILM----KHLVIEKHKKEGSNPVGLDVSLTNI 707
Query: 294 ------------------VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
++E + E GC PN T+ I LC G + A+ ++
Sbjct: 708 SVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHH 764
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 149/366 (40%), Gaps = 26/366 (7%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVR-------RLA 73
T S++ S S DP AL+ + + +H+ P S L + R A
Sbjct: 46 TLIPSLTPSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAA 105
Query: 74 KSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVI 133
++ R S I++ H +L NL+R + A D +L S+
Sbjct: 106 ENVRNSMIKSCTSPH-------DATFLLNLLRR------MNTAAAAADHQHQLAFKLSLT 152
Query: 134 SFNALLFACTRSRLYDKVPILFDEI--PKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
S+N LL +R + D++ L+ E+ ++ P+ I+ +L S+C G+ A
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+ TYT+++ + + E A ++ M ++ V+ N+ G
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA---VSYTNLIHGLCEAG 269
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E MR+ G P +Y L+ C++ EA ++ + E GC PN T+
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-K 370
I +LC G D+A K+ E V P L+ K+ +++A GV+ ++ K
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESK 389
Query: 371 KFPPNV 376
K PNV
Sbjct: 390 KVCPNV 395
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + G+ D A R F M G +FNA + C R+ + IL E K+
Sbjct: 436 LIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQIL--ESLKE 493
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++ ++ +Y L+ +C +G + A L M + ++T+ +++ L K+G ++
Sbjct: 494 KHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQD 553
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L +M K V + YN+ + D +R E+++ + +G +P+ ++Y +
Sbjct: 554 AMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIK 613
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YC ++EA+++ ++ G ++ + I G D A+ V + P
Sbjct: 614 AYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEP 673
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ T +L++ LV +K KE
Sbjct: 674 SYLTYSILMKHLVIEKHKKEG 694
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/311 (18%), Positives = 123/311 (39%), Gaps = 35/311 (11%)
Query: 38 EFDPDKALDIYSS-VSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQ 96
E+D D+A +I + +S Y V + A ++ R + E ++ KN+ +
Sbjct: 583 EYDFDRANEILNRLISSGYQPNVVTYTA---FIKAYCSQGRLEEAEEMVIKIKNEGVLLD 639
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL----------------- 139
LI +YG G+ D A +M G S ++++ L+
Sbjct: 640 SFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVG 699
Query: 140 -------FACTRSRLYDKV-----PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ + ++ K+ +LF+++ + P+ +Y L+ C G + A
Sbjct: 700 LDVSLTNISVDNTDIWSKIDFGITTVLFEKMAE-CGCVPNLNTYSKLINGLCKVGRLNVA 758
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L + M G+ + + + ++L+ K G EA L M + + +Y + I
Sbjct: 759 FSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICG 818
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+ + E+ + + + G D +++ L+ K +D+ ++ +E+NGC +
Sbjct: 819 LFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLH 878
Query: 307 ATTFRTWIYHL 317
T+ + L
Sbjct: 879 PETYSMLMQEL 889
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + P S LL SG+ + N+M G+ + TY +++ L K+G+
Sbjct: 246 RNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDL 305
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
E + RL+ +M + G+ DV YN + + YG G E + L +EM+D G PD I+YN
Sbjct: 306 ENSRRLFVQMREMGLSPDVVTYN-SLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CYCK E M A + + ++ NG PN T+ T I C G A K+F +
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEA 361
+P+ T L++ K + EA
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEA 448
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 168/382 (43%), Gaps = 35/382 (9%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQD---LTVRRLAKSKR 77
+ + I VSK LR DP AL + K S V R+ + + V + +++
Sbjct: 125 SALAPIWVSKILLGLRE--DPKLALKFF----KWAGSQVGFRHTTESYCIIVHLVFRARM 178
Query: 78 FSDIETLIESHKNDPKITQEPYLCN---------------------LIRSYGQAGMFDHA 116
++D ++ + ++ +CN L + + G+ + A
Sbjct: 179 YTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEA 238
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
F +M T S N LL ++S V F+++ ++P +Y +++
Sbjct: 239 NECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA-GIAPSVFTYNVMID 297
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
C G + + L +M G+ VTY ++++ K G+ EE L++EM+ G
Sbjct: 298 YLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVP 357
Query: 237 DVAAYNVRITNTYGGDPE--RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D+ YN + N Y + R E EM++ GLKP+ ++Y+ L+ +CK MM A K+
Sbjct: 358 DIITYN-GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL 416
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + G PN T+ + I C +GN +A+K+ + + + T L++GL K
Sbjct: 417 FVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCK 476
Query: 355 KKKIKEAKGVIRT-IKKKFPPN 375
++ EA+ V R+ +K PN
Sbjct: 477 AGRMIEAEEVFRSMLKDGISPN 498
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 7/278 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + A F +M G +V++++ L+ A + + LF ++ ++
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM-RRT 423
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P++ +Y L+ ++C +G+ +A +LLN+M GV++ VTYT +L+ L K G EA
Sbjct: 424 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 483
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLM 279
E ++ M K G+ + Y + ER+++ ++ +M + +KPD I Y ++
Sbjct: 484 EEVFRSMLKDGISPNQQVYTALVHGYI--KAERMEDAMKILKQMTECNIKPDLILYGSII 541
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C ++E K + E ++ G S N T I +G A F+E V
Sbjct: 542 WGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVE 601
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
T +L++GL K ++ A R + PNV
Sbjct: 602 ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNV 639
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
L+ +AG A F M + G + + AL+ ++ R+ D + IL + +
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL--KQMTE 527
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ PD I YG ++ HC ++ +L EM+++G+ V TT+++ +K G + +
Sbjct: 528 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 587
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + EM+ GV+ + Y V I G E + M GL+P+ Y L+
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLID 647
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN ++ AKK+++ ++ G +P+ T F I GN +A + +
Sbjct: 648 GLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEF 707
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNVL 377
D + LV G + ++ +A+ + +K P VL
Sbjct: 708 DLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVL 746
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 126/291 (43%), Gaps = 2/291 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R + E + S D + L+ Y +A + AM+ QM E
Sbjct: 474 LCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPD 533
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+I + ++++ R ++ ++ +E+ K +S + + ++ ++ +G S AL
Sbjct: 534 LILYGSIIWGHCSQRKLEETKLILEEM-KSRGISANPVISTTIIDAYFKAGKSSDALNFF 592
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
EM++ GVE T VTY +++ L K G E A + M G+ +VA Y I
Sbjct: 593 QEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKN 652
Query: 252 D-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ E K+L DEM+ G+ PD ++ L+ K+ + EA + + E + +
Sbjct: 653 NCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY 712
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + G +A K F E + +P+ L+ K+ ++ EA
Sbjct: 713 TSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 763
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I +Y +AG A+ F +M ++G +++++ L+ ++ + + F +
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRM-LSL 633
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ Y L+ C + + A +L +EM+ +G+ +T +++ K GN +EA
Sbjct: 634 GLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 693
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L S M + ++ D+ Y ++ + G+ + ++ +EM + G+ P+ + L+
Sbjct: 694 LVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 753
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
Y K +DEA ++ +E G + T +
Sbjct: 754 YYKRGQLDEAIELKNEMERMGLITESATMQ 783
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C LI +AG+ + A+ F +M LG +V + +L+ ++ + LFDE+
Sbjct: 608 CVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC 667
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELL----------------------------- 191
+ ++PD ++ L+ + G+ +AL L+
Sbjct: 668 R-GMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELH 726
Query: 192 ------NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
NEM KG+ V +L YK+G +EA L +EME+ G+
Sbjct: 727 QARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 161/339 (47%), Gaps = 9/339 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALD+++ + P + + L+V +AK KRF + +L E + I+ Y C
Sbjct: 64 NEALDLFTRMVHSRPLPSIVDFTRLLSV--IAKMKRFDVVISLFEQMQ-ILGISPVLYTC 120
Query: 102 NLIRS-YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N++ + ++ A +M +LG +++F +LL C +R+ D + LFD+I
Sbjct: 121 NIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALA-LFDQIV 179
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
P+ ++Y L+ C + + A+E+ N+M + G+ VTY ++++ L + G
Sbjct: 180 GM-GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRW 238
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+A L +M K+G+ +V + I G KEL M + PD +Y L
Sbjct: 239 SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C +DEA++++ +E NG PN T+ T I+ C S + K+F E
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPNV 376
+ + T +L++G + A+ V + ++ PP++
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDI 397
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 36/298 (12%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK------------ 160
+HA+ F+QM + G +V+++N+L+ C R D +L D + +
Sbjct: 204 NHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTAL 263
Query: 161 ---------------------KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
+ ++ PD +Y L+ C G D+A ++ ME+ G
Sbjct: 264 IDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGY 323
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKE 258
VTYTT+++ K E+ +++ EM +KG+ + Y V I G P+ +E
Sbjct: 324 YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQE 383
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+ ++M PD +YN L+ C N +++A +++ + + N T+ I +C
Sbjct: 384 VFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMC 443
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
G + A+ +F P+ T ++ G ++ I EA + + +K+ F PN
Sbjct: 444 KVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%), Gaps = 38/226 (16%)
Query: 84 LIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT 143
L+ES+ P E LI + ++ + + F +M + G + I++ L+
Sbjct: 317 LMESNGYYP---NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYC 373
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
D +F+++ + PD +Y +LL C +G +KAL + M + +++
Sbjct: 374 LVGRPDVAQEVFNQMGSR-RAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINI 432
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEM 263
VTYT ++ + K G E+A L+ + K
Sbjct: 433 VTYTIIIQGMCKVGKVEDAFDLFCSLFSK------------------------------- 461
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G+KP+ I+Y +++ +C+ + EA +++ ++E+G PN +
Sbjct: 462 ---GMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L+ SY + +A + ++M G P + +N + + C + +L P L D K
Sbjct: 182 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL--PSPDLLDLAEK 239
Query: 161 KY------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
Y N +K++ + C G DKA +L+ EM KG T TY+ V+ L
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
E+A L+ EM+ GV DV Y + I + G E+ + L +EMR G P +
Sbjct: 300 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 359
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y L+ Y K + + +A ++ + + GC PN T+ + LC +GN KA++V+ +
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 334 VMV---------------HKI-PDFNTVKLLVEGLVKKKKIKEA 361
+ H + P+ T LV+GL K K+ A
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 463
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 167/395 (42%), Gaps = 61/395 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + + + P +S Y++ +T L + + L + K +T + Y
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITF--LCHATKVEKAFLLFQEMKM-VGVTPDVYTY 326
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP-------- 152
LI S+ +AG+ + A F++M +G +V+++ AL+ A +++ +VP
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK---QVPQANDIFHR 383
Query: 153 --------------ILFDEIPK-------------------------------KYNLSPD 167
L D + K ++ L+P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
++YG L+ C + D A ELL+ M + G E + Y +++ K G + A+ ++
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 228 EMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
+M K G V Y I + G + +++ +M P+ ++Y ++ C+
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
++A K+ +EE GCSPN T+ I L +G D + +F + P++ T +
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
+L+ L + +A+ ++ +K+ + P L+ ++
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG D A F QM + G SV ++ +L+ + D + ++ K
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD- 543
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +P+ ++Y ++ C G S+KAL+LL+ ME KG VTYT +++ L K G + +
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGG---DPERLK---------------------- 257
L+++M +KG + Y V I + D RL
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 663
Query: 258 ---------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE--NGCSPN 306
+++EM G P Y L+ C+ K ++ A ++++ + E + +
Sbjct: 664 FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTD 723
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + I LC + ++A++++ E +P+ + L++GLV+ KK EA
Sbjct: 724 NDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 118/311 (37%), Gaps = 50/311 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L++ AG D R +M E G + A C R D + ++ E K
Sbjct: 46 LVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKL 105
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + GL+ S+ D+A+ L+ M VTY T+L+ K+
Sbjct: 106 DTVLCTHMISGLMEASY-----FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLM 279
+R+ + M +G + + + +N + ++Y D +L++ M G P + YN +
Sbjct: 161 CKRIINMMMTEGCNPNPSLFN-SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 219
Query: 280 TCYCKNE------MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---- 329
C E ++D A+K+Y + C N + LCG G FDKA+++
Sbjct: 220 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 279
Query: 330 -------------------------------FKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
F+E MV PD T +L++ K I
Sbjct: 280 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 339
Query: 359 KEAKGVIRTIK 369
++A+ + ++
Sbjct: 340 EQAQWLFEEMR 350
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 83/204 (40%), Gaps = 12/204 (5%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + P K++Y L++ +G D + EM G + T + L K+G
Sbjct: 32 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE-----RLKELIDEMRDAGLKPDTIS 274
+A + +E++ LD V T+ G E + MR P+ ++
Sbjct: 92 ADALDM---IEREDFKLD----TVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y L++ + K + + K++ + GC+PN + F + ++ C ++ AYK+
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKI 358
P + + + + ++K+
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKL 228
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 37/264 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G D AM+ QM + +V+++ A++ R +K L + +K
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y L+ +G D +L+L +M KG VTY ++N L G ++
Sbjct: 579 -GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDK 637
Query: 222 AERLWSEMEKK------------------------GVDLDVAAYN-VRITNTYG------ 250
A L EM++ G+ ++ +Y V I YG
Sbjct: 638 ARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCF 697
Query: 251 ---GDPERLKELIDEMRD--AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E EL EM + + +K D Y L+ C ++EA ++Y + G P
Sbjct: 698 SKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVP 757
Query: 306 NATTFRTWIYHLCGSGNFDKAYKV 329
+ F I L +D+A ++
Sbjct: 758 ELSVFVCLIKGLVEVKKWDEALQL 781
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 26/284 (9%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+L+ SY + +A + ++M G P + +N + + C + +L P L D K
Sbjct: 117 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL--PSPDLLDLAEK 174
Query: 161 KY------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
Y N +K++ + C G DKA +L+ EM KG T TY+ V+ L
Sbjct: 175 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 234
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTI 273
E+A L+ EM+ GV DV Y + I + G E+ + L +EMR G P +
Sbjct: 235 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 294
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y L+ Y K + + +A ++ + + GC PN T+ + LC +GN KA++V+ +
Sbjct: 295 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354
Query: 334 VMV---------------HKI-PDFNTVKLLVEGLVKKKKIKEA 361
+ H + P+ T LV+GL K K+ A
Sbjct: 355 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 398
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 167/395 (42%), Gaps = 61/395 (15%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + + + P +S Y++ +T L + + L + K +T + Y
Sbjct: 205 DKAFQLIKEMMRKGFVPDTSTYSKVITF--LCHATKVEKAFLLFQEMKM-VGVTPDVYTY 261
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP-------- 152
LI S+ +AG+ + A F++M +G +V+++ AL+ A +++ +VP
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK---QVPQANDIFHR 318
Query: 153 --------------ILFDEIPK-------------------------------KYNLSPD 167
L D + K ++ L+P+
Sbjct: 319 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 378
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
++YG L+ C + D A ELL+ M + G E + Y +++ K G + A+ ++
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 228 EMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
+M K G V Y I + G + +++ +M P+ ++Y ++ C+
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
++A K+ +EE GCSPN T+ I L +G D + +F + P++ T +
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 558
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWK 381
+L+ L + +A+ ++ +K+ + P L+ ++
Sbjct: 559 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 593
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG D A F QM + G SV ++ +L+ + D + ++ K
Sbjct: 420 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD- 478
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ +P+ ++Y ++ C G S+KAL+LL+ ME KG VTYT +++ L K G + +
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGD-----------------PERLKE------- 258
L+++M +KG + Y V I + P+ L+
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQG 598
Query: 259 ----------LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE--NGCSPN 306
+++EM G P Y L+ C+ K ++ A ++++ + E + +
Sbjct: 599 FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTD 658
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + I LC + ++A++++ E +P+ + L++GLV+ KK EA
Sbjct: 659 NDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 713
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 137/343 (39%), Gaps = 48/343 (13%)
Query: 62 RYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC-NLIRSYGQAGMFDHAMRTF 120
R+ L K R++D +IE + D K+ + LC ++I +A FD AM
Sbjct: 10 RFTVGCFAHALCKEGRWADALDMIE--REDFKL--DTVLCTHMISGLMEASYFDEAMSFL 65
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+M +V+++ LL + + + + + + +P+ + L+ S+C+
Sbjct: 66 HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTE-GCNPNPSLFNSLVHSYCN 124
Query: 181 SGSSDKALELLNEMENKGVEVTTVTY--------------------------------TT 208
A +LLN M G V Y
Sbjct: 125 EKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANC 184
Query: 209 VLN---------CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKE 258
VLN CL G ++A +L EM +KG D + Y+ IT + E+
Sbjct: 185 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 244
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L EM+ G+ PD +Y L+ +CK ++++A+ ++E + GCSP T+ I+
Sbjct: 245 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 304
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ +A +F V P+ T LV+GL K I +A
Sbjct: 305 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 44/228 (19%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D+A+ L+ M VTY T+L+ K+ +R+ + M +G + + + +N
Sbjct: 59 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN-S 117
Query: 245 ITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE------MMDEAKKVYE 296
+ ++Y D +L++ M G P + YN + C E ++D A+K+Y
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV--------------------------- 329
+ C N + LCG G FDKA+++
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237
Query: 330 --------FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
F+E MV PD T +L++ K I++A+ + ++
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMR 285
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 37/264 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G D AM+ QM + +V+++ A++ R +K L + +K
Sbjct: 454 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 513
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
SP+ ++Y L+ +G D +L+L +M KG VTY ++N L G ++
Sbjct: 514 -GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDK 572
Query: 222 AERLWSEMEKK------------------------GVDLDVAAYN-VRITNTYG------ 250
A L EM++ G+ ++ +Y V I YG
Sbjct: 573 ARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCF 632
Query: 251 ---GDPERLKELIDEMRD--AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E EL EM + + +K D Y L+ C ++EA ++Y + G P
Sbjct: 633 SKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVP 692
Query: 306 NATTFRTWIYHLCGSGNFDKAYKV 329
+ F I L +D+A ++
Sbjct: 693 ELSVFVCLIKGLVEVKKWDEALQL 716
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 35/304 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK- 161
LI++Y Q ++ A+ M G + +N L+ R++ ++ +L ++ +K
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Query: 162 ---------------------------------YNLSPDKISYGLLLKSHCDSGSSDKAL 188
+ P+ + Y +L+K HCD G++ +AL
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
M KG+ Y+ +++ L K G +EA ++ + K GV DV YN I+
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
GD E+ +L DEM G+ P+ + YN L+ CK + +A+++++ +EE P+
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDV 731
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ T I C SGN +A+K+F E + PD +L++G K+ +++A +
Sbjct: 732 VTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 791
Query: 368 IKKK 371
++K
Sbjct: 792 AQQK 795
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 123/232 (53%), Gaps = 3/232 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + + G + A + +D+M G +++ +N L+ + K LFDEI +K
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+L PD ++Y ++ +C SG+ +A +L +EM +KG+ Y +++ K+GN E+
Sbjct: 726 -DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 784
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ E ++K V ++A+N I + G +EL D+M D L P+ ++Y L+
Sbjct: 785 ALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID 843
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
Y K EMM+EA++++ +E PN T+ + + GN K +FK+
Sbjct: 844 AYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 8/349 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL++ + + P Y L V K KR + + + ES +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYT--LLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + + G + A+R D+M G +V+++NA++ ++ K LF+E+
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +Y LL+ + S KA ELL EM+ + + + TY+ +++ L + ++
Sbjct: 411 -GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLM 279
A + +M + GV +V Y I Y + E EL+ M G+ PD YN L+
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLI-KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
C+ + ++EAK + + E G PNA T+ +I SG A + FK+ + +
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEEL 387
P+ +L++G EA + ++K P++ RA+ + L
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI-RAYSAIIHSL 636
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 3/275 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
I Q G D A+ M E G ++ L+ + + + ++F+ +P
Sbjct: 282 FIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS- 340
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L+P++ +Y L+ G+ ++AL + +EM +G+++ VTY ++ + K G +A
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L++EM G++ D YN+ I D + EL+ EM+ L P +Y+ L++
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + + +A +V + + NG PN + T I ++ A ++ K + +PD
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPN 375
L+ GL + KK++EAK ++ + +K PN
Sbjct: 521 LFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y ++G A + FD+M G + L+ C + +K LF E +K
Sbjct: 737 IIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK- 795
Query: 163 NLSPDKIS-YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
S +S + L+ S C G +A EL ++M +K + VTYT +++ K EE
Sbjct: 796 --SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853
Query: 222 AERLWSEMEKKGVDLDVAAY-NVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
AE+L+ +ME + + + Y ++ ++ G+ ++ L +M G+ D I+Y + +
Sbjct: 854 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 913
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
YCK EA K+ G F I+HLC
Sbjct: 914 AYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 951
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 124/242 (51%), Gaps = 10/242 (4%)
Query: 94 ITQEPYL-CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKV 151
I+ + Y+ C LI G+ G + A+ F + + + S+ +FN+L+ + C ++ +
Sbjct: 762 ISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ-KSVGSLSAFNSLIDSFCKHGKVIEAR 820
Query: 152 PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLN 211
+ D + KK L+P+ ++Y +L+ ++ + ++A +L +ME + + T+TYT++L
Sbjct: 821 ELFDDMVDKK--LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLL 878
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY---GGDPERLKELIDEMRDAGL 268
+ GN + L+ +ME +G+ D AY V + + Y G E LK L+++ G+
Sbjct: 879 SYNQIGNRFKMISLFKDMEARGIACDAIAYGV-MASAYCKEGKSLEALK-LLNKSLVEGI 936
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
K + ++ L+ CK + + ++ + + S ++ T T + SGN D+A K
Sbjct: 937 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 996
Query: 329 VF 330
V
Sbjct: 997 VL 998
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 101/210 (48%), Gaps = 2/210 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI S+ + G A FD M + +++++ L+ A ++ + ++ LF ++ +
Sbjct: 805 SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 864
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N+ P+ ++Y LL S+ G+ K + L +ME +G+ + Y + + K+G + E
Sbjct: 865 -NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +L ++ +G+ L+ ++ I + + EL+ EM L + + N L+
Sbjct: 924 ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ K+ DEA KV ++ G P + +
Sbjct: 984 GFYKSGNEDEASKVLGVMQRLGWVPTSLSL 1013
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN 322
M +A + PD +Y ++ +CK + + K V +E+ C PN T+ +I LC +G
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGA 291
Query: 323 FDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D+A +V K + PD +T LLV+G K+K+ KEAK + ++
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 4/277 (1%)
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
E + L+ + G D A ++ G ++ +NAL+ + + DK +L+
Sbjct: 330 EAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYS 389
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ NL P+ I+Y +L+ S C SG D A+ + M G+ T Y +++N K
Sbjct: 390 NM-SLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKF 448
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTIS 274
G+ AE L+ EM KGV+ + I+ Y D + K +L ++M D G+ P+ +
Sbjct: 449 GDLSAAESLFIEMTNKGVEPTATTFTSLISG-YCKDLQVQKAFKLYNKMIDNGITPNVYT 507
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+ L++ C M EA ++++ L E P T+ I C G DKA+++ ++
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+PD T + L+ GL ++ +AK I + K+
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 150/352 (42%), Gaps = 39/352 (11%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
YA + + K S E+L N +LI Y + A + +++
Sbjct: 436 YAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNK 495
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M + G +V +F AL+ + + LFDE+ ++ + P +++Y +L++ +C G
Sbjct: 496 MIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER-KIKPTEVTYNVLIEGYCRDG 554
Query: 183 SSDKALELLNEMENKG-----------------------------------VEVTTVTYT 207
DKA ELL +M KG V++ + Y+
Sbjct: 555 KIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYS 614
Query: 208 TVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPER--LKELIDEMRD 265
+L+ ++G EA EM ++G+++D+ + V I P+R +L+ +M D
Sbjct: 615 ALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALK-QPDRKTFFDLLKDMHD 673
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
GL+PD + Y ++ Y K +A + ++ + C PN T+ + LC +G D+
Sbjct: 674 QGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDR 733
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
A +FK + P+ T ++ L K+ +KEA G+ + K N +
Sbjct: 734 AGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTV 785
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%), Gaps = 2/272 (0%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+ + + F+ ++ D+M ELG + + + L+ + D L ++
Sbjct: 299 CTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV-G 357
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++ P+ Y L+ S C G DKA L + M + +TY+ +++ + G +
Sbjct: 358 RFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLD 417
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A + M + G+ V AYN I GD + L EM + G++P ++ L+
Sbjct: 418 VAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLI 477
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ YCK+ + +A K+Y + +NG +PN TF I LC + +A ++F E V
Sbjct: 478 SGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIK 537
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P T +L+EG + KI +A ++ + +K
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK 569
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 137/326 (42%), Gaps = 15/326 (4%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIES-HKNDPKITQEPYL 100
DKA ++ + H V Y + L + R S + I+ HK + K+ + Y
Sbjct: 557 DKAFELLEDM--HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCY- 613
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACT----RSRLYDKVPILFD 156
L+ Y Q G A+ +M + G ++ L+ R +D + + D
Sbjct: 614 SALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHD 673
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
+ L PD + Y ++ ++ GS KA E + M + VTYT ++N L K
Sbjct: 674 Q-----GLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKA 728
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
G + A L+ M+ V + Y + N T G+ + L M GL +T+++
Sbjct: 729 GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTH 787
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N ++ +CK EA KV + ENG P+ T+ T IY C SGN + K++ +
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLN 847
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEA 361
PD LL+ G ++ +A
Sbjct: 848 RGLEPDLVAYNLLIYGCCVNGELDKA 873
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ ++Y L+ C +G D+A L M+ V ++TY L+ L K+GN +EA L
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL 772
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
M KG+ + +N+ I G +++ EM + G+ PD ++Y+ L+ YC+
Sbjct: 773 HHAM-LKGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCR 831
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + + K+++ + G P+ + IY C +G DKA+++ + + IPD
Sbjct: 832 SGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 12/236 (5%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V + +ALL + R + V LFDE + PD + +++S C+ +A E +
Sbjct: 190 VRTLSALLNGLLKVRKFITVWELFDE-SVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKI 248
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
ME G +++ VTY +++ L K EA + + KG+ DV Y +
Sbjct: 249 RWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFC-- 306
Query: 252 DPERLK------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
RL+ +L+DEM + G P + + L+ K +D+A ++ + G P
Sbjct: 307 ---RLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVP 363
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
N + I LC G+ DKA ++ +++ P+ T +L++ + ++ A
Sbjct: 364 NLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 8/236 (3%)
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
S + FN L+ SR++D V I+ ++ NL P+ + LL E
Sbjct: 154 STLGFNLLVQNYVLSSRIFDAVVIV--KLMFANNLLPEVRTLSALLNGLLKVRKFITVWE 211
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
L +E N GV T + V+ + + + A+ ME G DL + YNV I
Sbjct: 212 LFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLC 271
Query: 250 GGDPERLKELIDEMRDAG---LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
GD R+ E ++ R G L D ++Y L+ +C+ + + ++ + + E G SP
Sbjct: 272 KGD--RVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT 329
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+ L G D AY++ + +P+ L+ L K + +A+
Sbjct: 330 EAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAE 385
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
D R KE I M G ++YN L+ CK + + EA +V L G + + T+
Sbjct: 240 DFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYC 299
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIRTIKK 370
T + C F+ ++ E V + P V LV+GL K+ KI +A + V++ +
Sbjct: 300 TLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRF 359
Query: 371 KFPPNVL 377
F PN+
Sbjct: 360 GFVPNLF 366
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+IR + + G F A + +M E G ++++ L++ RS L+D + +
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNR- 848
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
L PD ++Y LL+ C +G DKA EL ++M +G+
Sbjct: 849 GLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGI 885
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 50/335 (14%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ +Y GM A+ F+ + + G ++S+ +LL A RS +K +F+++ KK
Sbjct: 228 SLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKM-KK 286
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+K+SY L+ ++ +G +A+ LL+EME G++ V+ +T+L +
Sbjct: 287 NSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITR 346
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E + +G+DL+ AYN I + GD E+ EL MR++ +KPD ++YN L++
Sbjct: 347 IETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILIS 406
Query: 281 -----------------------------------CYCKNEMMDEAKKVYEGLEENGCSP 305
Y K + EA+ + ++++GC P
Sbjct: 407 GSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFP 466
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I G + +A+ +FKE + PD L+E K + + ++
Sbjct: 467 DVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLM 526
Query: 366 RTIKKKFPP-------------NVLRAWKKVEEEL 387
+KKK P ++R WK E +
Sbjct: 527 EFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMI 561
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 129/276 (46%), Gaps = 10/276 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
N+I + G AG + A+ +M E G +++ N +L A Y K I + EI K
Sbjct: 86 NVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKA-ISYFEIMKG 144
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEV--TTVTYTTVLN--CLYKQG 217
N++ D + +++ G +A+EL N M + + VTYT++++ C+Y G
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIY--G 202
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISY 275
E + ++ M +GV ++ AYN + Y G + + ++ GL+PD +SY
Sbjct: 203 QVENCKAIFDLMVAEGVKPNIVAYN-SLLGAYASRGMHREALAIFNLIKKNGLRPDIVSY 261
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
L+ Y ++ ++A++V+ +++N C PN ++ I +G +A + E
Sbjct: 262 TSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEK 321
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
PD ++ L+ + ++I + ++ + +
Sbjct: 322 DGIQPDVVSISTLLAACGRCRQITRIETILEAARSR 357
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 132/281 (46%), Gaps = 7/281 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI ++ +AG + A+ + M P + ++N ++ AC + + K L ++ +
Sbjct: 51 SLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTEN 110
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +++ ++L + + KA+ M+ V T T +++CL K G E
Sbjct: 111 -GVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGE 169
Query: 222 AERLWSEMEKKGVDL--DVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNF 277
A L++ M ++ DV Y I ++Y G E K + D M G+KP+ ++YN
Sbjct: 170 AIELFNSMRERRTKCPPDVVTY-TSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNS 228
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ Y M EA ++ +++NG P+ ++ + + S +KA +VF +
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
P+ + L++ +KEA G++ ++K P+V+
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVV 329
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTT 203
R D+ LF E+ +++ PD Y L+ +H +G A+ ++ +M + T
Sbjct: 23 RHNQVDQARGLFFEM-QEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTR 81
Query: 204 VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDE 262
TY V+N GN ++A L +M + GV D+ +N+ ++ G + +
Sbjct: 82 TTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEI 141
Query: 263 MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE--NGCSPNATTFRTWIYHLCGS 320
M+ A + DT + N ++ C K EA +++ + E C P+ T+ + ++ C
Sbjct: 142 MKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIY 201
Query: 321 GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
G + +F V P+ L+ + +EA + IKK
Sbjct: 202 GQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKK 251
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 133/331 (40%), Gaps = 44/331 (13%)
Query: 5 RHIRRLCTATTAAGS-STTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRY 63
R I R+ T AA S ++++ + S D +KAL++Y+S+ + P + Y
Sbjct: 342 RQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTY 401
Query: 64 AQDLTVRRLAKSKRFSDIETLIESHKNDPKI--TQEPYLCNLIRSYGQAGMFDHAMRTFD 121
++ + +K ++++ E D K+ T+E Y +LI SY + G A TF
Sbjct: 402 --NILISGSSKLGKYTESLRFFEDMV-DSKVSSTKEVY-SSLIYSYIKQGKLSEAESTFS 457
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
M + G V+++ L+ A + + LF E+ + PD I L+++
Sbjct: 458 SMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVN-GIPPDAIICSSLMEAFNKG 516
Query: 182 GSSDKALELLNEMENKGV-----------------------------------EVTTVTY 206
G ++ L+L+ M+ K + ++ T
Sbjct: 517 GEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTL 576
Query: 207 TTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRD 265
VLN L K G E +L+ +M + ++ Y V + N G + E++ M D
Sbjct: 577 NHVLNFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMED 636
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
+G+ P + ++ + MD A + E
Sbjct: 637 SGVHPTLYMFQNVLPYIWRENGMDFAATMQE 667
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 4/176 (2%)
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMR 264
Y ++ + ++A L+ EM++ D YN I ++ G ++++M
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
A + P +YN ++ +A ++ + + ENG P+ T + L +
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK---KFPPNVL 377
KA F+ + D T+ +++ LVK + EA + ++++ K PP+V+
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVV 189
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 98 PYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILF 155
P L N L+ SY + +A + ++M G P + +N + + C + +L P L
Sbjct: 346 PSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL--PSPDLL 403
Query: 156 DEIPKKY------NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
D K Y N +K++ + C G DKA +L+ EM KG T TY+ V
Sbjct: 404 DLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKV 463
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGL 268
+ L E+A L+ EM+ GV DV Y + I + G E+ + L +EMR G
Sbjct: 464 ITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGC 523
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P ++Y L+ Y K + + +A ++ + + GC PN T+ + LC +GN KA++
Sbjct: 524 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFE 583
Query: 329 VFKESVMV---------------HKI-PDFNTVKLLVEGLVKKKKIKEA 361
V+ + + H + P+ T LV+GL K K+ A
Sbjct: 584 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 632
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 135/330 (40%), Gaps = 56/330 (16%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELG-TPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N R G FD A + +M G P + + F C +++ +K +LF E+ K
Sbjct: 427 NFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV-EKAFLLFQEM-K 484
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++PD +Y +L+ S C +G ++A L EM + G T VTYT +++ K
Sbjct: 485 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 544
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN--------------------------------- 247
+A ++ M G + Y +
Sbjct: 545 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 604
Query: 248 ----------TYGGDPERL---------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
TYG + L EL+D M +G +P+ I Y+ L+ +CK +
Sbjct: 605 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 664
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
D A++V+ + + G P+ T+ + I + G D A KV + + P+ T +
Sbjct: 665 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 724
Query: 349 VEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
++GL + + ++A ++ +++K PNV+
Sbjct: 725 IDGLCRIGESEKALKLLSLMEEKGCSPNVV 754
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 132/325 (40%), Gaps = 55/325 (16%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA + + + P +S Y++ +T L + + L + K +T + Y
Sbjct: 439 DKAFQLIKEMMRKGFVPDTSTYSKVITF--LCHATKVEKAFLLFQEMKM-VGVTPDVYTY 495
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI-- 158
LI S+ +AG+ + A F++M +G +V+++ AL+ A +++ + +F +
Sbjct: 496 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 555
Query: 159 ------------------------------------------------PKKYNLSPDKIS 170
++ L+P+ ++
Sbjct: 556 AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVT 615
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
YG L+ C + D A ELL+ M + G E + Y +++ K G + A+ ++ +M
Sbjct: 616 YGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 675
Query: 231 KKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
K G V Y I + G + +++ +M P+ ++Y ++ C+ +
Sbjct: 676 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 735
Query: 290 EAKKVYEGLEENGCSPNATTFRTWI 314
+A K+ +EE GCSPN T+ I
Sbjct: 736 KALKLLSLMEEKGCSPNVVTYTALI 760
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 134/338 (39%), Gaps = 42/338 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L R D E L+ + + L L+R + GM++ A+ ++ + G S
Sbjct: 149 LGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPS 208
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS-------- 183
+++NAL+ + + D + E+ + D+ + G + C G
Sbjct: 209 KVTYNALVQVLSSAGQVDLGFRVQKEMSES-GFCMDRFTVGCFAHALCKEGRWADALDMI 267
Query: 184 ------------------------SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
D+A+ L+ M VTY T+L+ K+
Sbjct: 268 EREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 327
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNF 277
+R+ + M +G + + + +N + ++Y D +L++ M G P + YN
Sbjct: 328 GWCKRIINMMMTEGCNPNPSLFN-SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNI 386
Query: 278 LMTCYCKNE------MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+ C E ++D A+K+Y + C N + LCG G FDKA+++ K
Sbjct: 387 FIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIK 446
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
E + +PD +T ++ L K+++A + + +K
Sbjct: 447 EMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 484
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 118/311 (37%), Gaps = 50/311 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L++ AG D R +M E G + A C R D + ++ E K
Sbjct: 215 LVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKL 274
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ + GL+ S+ D+A+ L+ M VTY T+L+ K+
Sbjct: 275 DTVLCTHMISGLMEASY-----FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 329
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNFLM 279
+R+ + M +G + + + +N + ++Y D +L++ M G P + YN +
Sbjct: 330 CKRIINMMMTEGCNPNPSLFN-SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 388
Query: 280 TCYCKNE------MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV---- 329
C E ++D A+K+Y + C N + LCG G FDKA+++
Sbjct: 389 GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM 448
Query: 330 -------------------------------FKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
F+E MV PD T +L++ K I
Sbjct: 449 MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLI 508
Query: 359 KEAKGVIRTIK 369
++A+ + ++
Sbjct: 509 EQAQWLFEEMR 519
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + +AG D A F QM + G SV ++ +L+ + D + ++ K
Sbjct: 654 LIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD- 712
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
+ +P+ ++Y ++ C G S+KAL+LL+ ME KG VTYT +++ L
Sbjct: 713 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M++ V+ + +++ + + R + LF ++ +
Sbjct: 167 LINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ- 225
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SPD +Y L+ + C+ LLN+M N + V ++TV++ L K+G EA
Sbjct: 226 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 285
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M ++GV+ DV Y + + + + ++ D M G PD ISY L+
Sbjct: 286 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 345
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK +D+A ++E + P+ T+ T ++ LC G A +F E V ++PD
Sbjct: 346 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPD 405
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T +L++ L K ++EA +++ I+
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIE 433
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A++ FD M G VIS+ L+ + DK LF+E+ +K + PD +Y
Sbjct: 318 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDTKTYNT 376
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G A+ L +EM +G VTY+ +L+ L K + EEA L +E
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436
Query: 234 VDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
++ D+ YN+ I G+ E ++L + GL P +YN ++ CK +++EA
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 496
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
K++ ++ N CSP+ T+ T + +A ++ +E + D +T LLVE L
Sbjct: 497 KLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 43/358 (12%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL ++ + + P +A+ LT +AK K +S + +L + + + Y
Sbjct: 38 DDALSSFNRLLHMHPPPSIVDFAKLLT--SIAKMKHYSTVLSL-STQMDSFGVPPNVYTL 94
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIP 159
N LI S+ A ++ +LG +F L+ C ++ + + LFD++
Sbjct: 95 NILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALH-LFDKMI 153
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ P+ ++YG L+ C G++ A+ LL ME + V YT++++ L K
Sbjct: 154 DE-GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212
Query: 220 EEAERLWSEMEKKGVDLDVAAY------------------------------NVRITNTY 249
EA L+S+M +G+ D+ Y +V I +T
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272
Query: 250 ------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G E++D M G++PD ++Y LM +C MDEA KV++ + G
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+P+ ++ T I C DKA +F+E IPD T L+ GL ++++A
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDA 390
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 12/313 (3%)
Query: 73 AKSKRFSDIETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTP 129
+KS F+ ++ + S + P + + L+ S + + + QMD G P
Sbjct: 29 SKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVP 88
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS--PDKISYGLLLKSHCDSGSSDKA 187
+V + N L+ + ++V F + K L PD ++ L++ C G +A
Sbjct: 89 PNVYTLNILINSFCH---LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L L ++M ++G + VTY T++N L K GN A RL ME+ DV Y I +
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYT-SIID 204
Query: 248 TYGGDPERLK--ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ D + + L +M G+ PD +Y L+ C + + + P
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 264
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ F T + LC G +A+++ + PD T L++G + ++ EA V
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 324
Query: 366 -RTIKKKFPPNVL 377
++K F P+V+
Sbjct: 325 DMMVRKGFAPDVI 337
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 28/308 (9%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
LCNL + H +QM V+ F+ ++ A C ++ + I+ ++
Sbjct: 241 LCNLCE-------WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV--DM 291
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
+ + PD ++Y L+ HC D+A+++ + M KG ++YTT++N K
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
++A L+ EM +K D YN + + G + L EM G PD ++Y+
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 411
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CKN ++EA + + +E + +P+ + I +C +G + A +F
Sbjct: 412 LLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 471
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVI---------------RTIKKKFPPN--VLRAW 380
P T +++ GL K+ + EA + TI + F N LRA
Sbjct: 472 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 531
Query: 381 KKVEEELG 388
+ +EE L
Sbjct: 532 QLLEEMLA 539
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 4/258 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F QM G + ++ +L+ A + V L +++ L PD + + ++
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKIL-PDVVIFSTVV 273
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G +A E+++ M +GVE VTYTT+++ Q +EA +++ M +KG
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333
Query: 236 LDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
DV +Y I N Y ++ L +EM PDT +YN LM C + +A
Sbjct: 334 PDVISYTTLI-NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
++ + G P+ T+ + LC + + ++A + K + PD ++++G+
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452
Query: 354 KKKKIKEAKGVIRTIKKK 371
+ +++ A+ + + K
Sbjct: 453 RAGELEAARDLFSNLSSK 470
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 4/209 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y + D AM F++M ++N L+ C RL D + LF E+ +
Sbjct: 342 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA-LFHEMVAR 400
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD ++Y +LL S C + ++A+ LL +E + Y +++ + + G E
Sbjct: 401 GQM-PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+S + KG+ V YN+ I G +L EM PD +YN +
Sbjct: 460 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIAR 519
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ +N A ++ E + G S + +T
Sbjct: 520 GFLQNNETLRAIQLLEEMLARGFSADVST 548
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ G A+ F +M G +++++ LL + C L + + +L + +
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALL--KAIEA 434
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL+PD Y +++ C +G + A +L + + +KG+ + TY +++ L K+G E
Sbjct: 435 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 494
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK--ELIDEMRDAGLKPDTISYNFLM 279
A +L+ EM+ D YN I + + E L+ +L++EM G D + L+
Sbjct: 495 ANKLFMEMDGNDCSPDGCTYNT-IARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553
Query: 280 TCYCKNEMMDEAKKVYEGLEENGC 303
EM+ + +GL+++ C
Sbjct: 554 ------EMLSD-----DGLDQSSC 566
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 138/275 (50%), Gaps = 13/275 (4%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRS-----RLYDKVPILFDEIPKKYNLSPDKIS 170
A + F +M +LG +V++ L+ +S L +L D P N P+ IS
Sbjct: 582 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 641
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y +++ C G D+A EL EM+ GV ++YT++++ + G ++A+ L++EM
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Query: 231 KKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
GV DV ++V I G EL++ M G P+T++Y L+ C N+ +
Sbjct: 702 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRIS 761
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM------VHKIPDFN 343
EA +++ +++ GC P+ T+ T + LC +GN A ++ K+ + + PD
Sbjct: 762 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 821
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKK-KFPPNVL 377
+ ++++GL K + EA+ + + +K PNV+
Sbjct: 822 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVI 856
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 23/302 (7%)
Query: 79 SDIETLIESHKNDPKITQEPYLCN----------LIRSYGQAGMFDHAMRTFDQMDELGT 128
+I+ +E HKN T PY N +I + G D A F +M LG
Sbjct: 612 GNIKIALELHKNMLSDT-SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGV 670
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
VIS+ +L+ RS + LF+E+ + PD ++ +L+ C G +A
Sbjct: 671 IPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD-IGVQPDVTTFSVLIDMLCKEGKVIEAN 729
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
ELL M +G TVTYTT++ L EA +L+ +M+K G DV Y +
Sbjct: 730 ELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 789
Query: 248 TYGGDPERLKELIDEM-RDAG-----LKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
G+ + EL +M D G KPD ISY+ ++ CK+ DEA+++++ ++
Sbjct: 790 CQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKAL 849
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV--KLLVEGLVKKKKIK 359
G PN ++ + I+ C SG + A +F E MV + N V +++ G K+ +I
Sbjct: 850 GVIPNVISYTSLIHGFCRSGKLEDAKHLFNE--MVDQGVQLNAVTYSVMIHGFCKEGQID 907
Query: 360 EA 361
+A
Sbjct: 908 KA 909
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 138/319 (43%), Gaps = 52/319 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + G A + M G +++++ L+ C + R+ + + KK
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMS--MKK 298
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN-------KGVEVTTVTYTTVLNCLY 214
PD I+YG L+K C +G + AL L EM N K + T + +++ L
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILC 358
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--------------------------- 247
K+G EA L M ++G LD+ Y+ I
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAI 418
Query: 248 TYG---------GDPERLKELIDEM-RDAG-----LKPDTISYNFLMTCYCKNEMMDEAK 292
TYG G+ +L EM D G KP ISY+ ++ CK+ DEA+
Sbjct: 419 TYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAR 478
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+++E ++ G P+ ++ T I+ C SG ++KA +F E + V PD T +L++ L
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538
Query: 353 VKKKKIKEAKGVIRTIKKK 371
KK K+ EA ++ + ++
Sbjct: 539 CKKGKVIEANKLLEVVIQR 557
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 13/285 (4%)
Query: 85 IESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CT 143
I ++ P +T L +++ G+ A + M + G +++++ L+ C
Sbjct: 45 IVTYSIRPDVTTSSMLIDILCKEGKV---IEANELLEVMIQRGCILDIVTYSTLIKGLCM 101
Query: 144 RSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK----GV 199
R+ + + +K PD I+YG L+K C +G+ + AL+L EM N G+
Sbjct: 102 EHRISEATWLFMS--MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGI 159
Query: 200 EV--TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERL 256
+ T ++Y+ +++ L K +EA L+ EM+ +G+ DV +Y I + G E+
Sbjct: 160 KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKA 219
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
K L +EM D G++PD + L+ +CK + EA ++ E + GC + T+ T I
Sbjct: 220 KCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKG 279
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
LC +A ++F + PD L++GL + KI A
Sbjct: 280 LCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIA 324
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 13/278 (4%)
Query: 92 PKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
P +T L +++ G+ A + + + + G V++ L+ C + R+ K
Sbjct: 526 PDVTTSSVLIDMLCKKGKV---IEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRI-SK 581
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL----LNEMENKGVEV--TTV 204
LF ++ +K P+ ++ L+K C SG+ ALEL L++ G+ +
Sbjct: 582 ATQLFLKM-QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 640
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM 263
+Y+ +++ L K G +EA L+ EM+ GV DV +Y I G + K L +EM
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
D G++PD +++ L+ CK + EA ++ E + + GC PN T+ T + LC +
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+A ++F + + +PD T L++GL + IK A
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 798
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 7/214 (3%)
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y++ PD + +L+ C G +A ELL M +G + VTY+T++ L + E
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM-RDAG-----LKPDTIS 274
A L+ M+K G D Y + G+ +L EM D G KP IS
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 167
Query: 275 YNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
Y+ ++ CK+ DEA+++++ ++ G P+ ++ + I+ C SG ++KA +F E +
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227
Query: 335 MVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
V PD T +L++ K+ K+ EA ++ +
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVM 261
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A F++M G VIS+ L+ S ++K LF+E+ + PD + +
Sbjct: 475 DEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD-VGIQPDVTTSSV 533
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C G +A +LL + +G + VT TT++ L + +A +L+ +M+K G
Sbjct: 534 LIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 593
Query: 234 VDLDVAAY-----------NVRI-----------TNTYG--------------------G 251
+V N++I T+ YG G
Sbjct: 594 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 653
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
+ +EL EM+ G+ PD ISY L+ +C++ +AK ++ + + G P+ TTF
Sbjct: 654 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 713
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I LC G +A ++ + + IP+ T LV+GL +I EA + ++K
Sbjct: 714 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 772
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%), Gaps = 19/285 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQM-DELG-----TPRSVISFNALLFACTRSRLYDKVPILF 155
L++ Q G + A++ +M ++ G ++IS++ ++ + R D+ LF
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 188
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
E+ K + PD ISY L+ C SG +KA L NEM + G++ T +++ K
Sbjct: 189 KEM-KAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDT 272
+G EA L M +G LD+ Y+ I R+ E L M+ G +PD
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC--MKHRISEATQLFMSMKKLGCRPDA 305
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS-------PNATTFRTWIYHLCGSGNFDK 325
I+Y LM C+ ++ A +++ + + P+ TT I LC G +
Sbjct: 306 IAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIE 365
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
A ++ + + I D T L++GL + +I EA + +++K
Sbjct: 366 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 194 MENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--- 250
M G+ + T+ ++NCL E + + ++G D+ Y++R T
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 251 -------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
G EL++ M G D ++Y+ L+ C + EA ++ +++ GC
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESV------MVHKIPDFNTVKLLVEGLVKKKK 357
P+A T+ T + LC +GN + A ++ +E + + P + ++++GL K ++
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 358 IKEAKGVIRTIKKK-FPPNVL 377
EA+ + + +K + P+V+
Sbjct: 181 EDEARELFKEMKAQGMMPDVI 201
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + G D A F +M LG +VIS+ +L+ RS + LF+E+ +
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQ- 884
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKAL 188
+ + ++Y +++ C G DKAL
Sbjct: 885 GVQLNAVTYSVMIHGFCKEGQIDKAL 910
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 136/285 (47%), Gaps = 11/285 (3%)
Query: 93 KITQEPYLC---NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP + +L+ + + A+ FDQM +G +V+ +N ++ +S+ D
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
L + + K + PD ++Y L+ C SG A +++ M + + T+ +
Sbjct: 204 NALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDPERLKELIDEMRD 265
++ K+G EAE + EM ++ +D D+ Y++ I YG + +E+ M
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI---YGLCMYSRLDEAEEMFGFMVS 319
Query: 266 AGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDK 325
G PD ++Y+ L+ YCK++ ++ K++ + + G N T+ I C +G +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 326 AYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
A ++F+ V P+ T +L+ GL KI++A ++ ++K
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 2/300 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L KSK+ + L+ + D +LI +G + A R M +
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V +FNAL+ AC + + ++E+ ++ +L PD ++Y LL+ C D+A E+
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYG 250
M +KG VTY+ ++N K E +L+ EM ++GV + Y + I
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G +E+ M G+ P+ I+YN L+ C N +++A + +++NG + T+
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I +C +G A+ ++ +PD T ++ GL KK +EA + R +K+
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 130/303 (42%), Gaps = 40/303 (13%)
Query: 113 FDHAMRTFDQMDELGTPR-----------------------------------SVISFNA 137
+D + ++QM LG P S+++F +
Sbjct: 97 YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS 156
Query: 138 LLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN 196
LL C R+YD + +FD++ P+ + Y ++ C S D AL+LLN ME
Sbjct: 157 LLNGFCRGDRVYDAL-YMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK 214
Query: 197 KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPER 255
G+ VTY ++++ L G +A R+ S M K+ + DV +N I G
Sbjct: 215 DGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSE 274
Query: 256 LKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIY 315
+E +EM L PD ++Y+ L+ C +DEA++++ + GC P+ T+ I
Sbjct: 275 AEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPP 374
C S + K+F E + + T +L++G + K+ A+ + R + P
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 375 NVL 377
N++
Sbjct: 395 NII 397
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 8/238 (3%)
Query: 73 AKSKRFSDIETLIES---HKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
K R S+ E E DP I L + Y + D A F M G
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSR---LDEAEEMFGFMVSKGCF 323
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
V++++ L+ +S+ + LF E+ ++ + + ++Y +L++ +C +G + A E
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQR-GVVRNTVTYTILIQGYCRAGKLNVAEE 382
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+ M GV +TY +L+ L G E+A + ++M+K G+D D+ YN+ I
Sbjct: 383 IFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMC 442
Query: 250 -GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G+ ++ + GL PD +Y +M K + EA ++ ++E+G PN
Sbjct: 443 KAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 36/266 (13%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D ++ F M + S+ F+ LL A ++ + YD V L++++ + + + +
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCN 120
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+LL C AL L +M G E + VT+ ++LN + +R++ +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR------GDRVYDALY-- 172
Query: 233 GVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+ D+M G KP+ + YN ++ CK++ +D A
Sbjct: 173 --------------------------MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ +E++G P+ T+ + I LC SG + A ++ PD T L++
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDAC 266
Query: 353 VKKKKIKEAKGVI-RTIKKKFPPNVL 377
VK+ ++ EA+ I++ P+++
Sbjct: 267 VKEGRVSEAEEFYEEMIRRSLDPDIV 292
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 21/335 (6%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K K+ ++ L+E D + + N LI + G D A+ + ++ G
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405
Query: 131 SVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ ++A++ + C + R+ + ++ D + N PD ++Y ++ C G D+A +
Sbjct: 406 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCN--PDVVTYTAIVDGFCRLGRIDEAKK 463
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY 249
+L +M G + TV+YT +LN L G + EA + + E+ + Y V + +
Sbjct: 464 MLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVM---H 520
Query: 250 GGDPE-RLKELID---EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G E +L E D EM + G P + N L+ C+N+ + EAKK E GC+
Sbjct: 521 GFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAI 580
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE-AKGV 364
N F T I+ C G+ + A V ++ + +K PD T L + L KK ++ E A+ +
Sbjct: 581 NVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELI 640
Query: 365 IRTIKKKFPPN--VLRA-------WKKVEEELGLV 390
++ + K P R+ W +V++ L L+
Sbjct: 641 VKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLL 675
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 131/264 (49%), Gaps = 5/264 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+LI+ Y + A+ + G P +S+ ++ F C ++ ++V L +++ +
Sbjct: 306 SLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI-EQVKCLMEKMVQ 364
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
NL PD+++Y L+ G +D AL L E E+KG + V Y+ +++ ++G +
Sbjct: 365 DSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMD 424
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
EA+ L +M + + DV Y I + + G + K+++ +M G KP+T+SY L
Sbjct: 425 EAKSLVIDMYSRSCNPDVVTYTA-IVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTAL 483
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C + EA+++ EE+ +PNA T+ ++ G +A + +E V
Sbjct: 484 LNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGF 543
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAK 362
P + LL++ L + +K+ EAK
Sbjct: 544 FPTPVEINLLIQSLCQNQKVVEAK 567
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 147/321 (45%), Gaps = 42/321 (13%)
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+++ E + C ++ SY +AG +A+R M + G ++ N ++ + +K
Sbjct: 228 ELSPEAFGCVMV-SYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKA- 285
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG-----VEVTT---- 203
+ F E + + PD ++Y L+K +CD + ALEL+ + +KG V T
Sbjct: 286 LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 345
Query: 204 ---------------------------VTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
VTY T+++ L K G+A++A E E KG +
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405
Query: 237 DVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
D Y+ I +++ G + K L+ +M PD ++Y ++ +C+ +DEAKK+
Sbjct: 406 DKVGYSA-IVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKM 464
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ + ++GC PN ++ + LC SG +A ++ S P+ T +++ G +
Sbjct: 465 LQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRR 524
Query: 355 KKKIKEAKGVIR-TIKKKFPP 374
+ K+ EA + R ++K F P
Sbjct: 525 EGKLSEACDLTREMVEKGFFP 545
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 133/323 (41%), Gaps = 39/323 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
++ + + G D A + QM + G + +S+ ALL C + + ++ + ++
Sbjct: 448 IVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMI--NVSEE 505
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ +P+ I+YG+++ G +A +L EM KG T V ++ L + E
Sbjct: 506 HWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVE 565
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A++ E KG ++V + I GD E ++++M + PD ++Y L
Sbjct: 566 AKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFD 625
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH------------------------ 316
K +DEA ++ + G P TFR+ I+
Sbjct: 626 ALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFR 685
Query: 317 ---------LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-KGVIR 366
LC GN ++A K+ + + D NT +L+E +KK A K +
Sbjct: 686 TIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQ 745
Query: 367 TIKKKFPPNVLRAWKKVEEELGL 389
++ P+ L+ +KV ++L L
Sbjct: 746 MFRRNLTPD-LKLCEKVTKKLVL 767
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 110/238 (46%), Gaps = 3/238 (1%)
Query: 137 ALLFACTRSRLYDKVPI-LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
+L+ A RS+ ++V + F +++ S + Y LL + A +L M
Sbjct: 164 SLVCAVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMT 223
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPE 254
+G+E++ + V+ + G A R+ + M+K GV+ +++ N I G E
Sbjct: 224 RRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLE 283
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ ++ M+ G+KPD ++YN L+ YC +++A ++ GL GC P+ ++ T +
Sbjct: 284 KALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVM 343
Query: 315 YHLCGSGNFDKAYKVFKESVM-VHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LC ++ + ++ V + IPD T L+ L K +A ++ + K
Sbjct: 344 GFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDK 401
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 4/204 (1%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ ++ C G + AL +L +M VTYT + + L K+G +EA L +
Sbjct: 583 VNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVK 642
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M KG+D + I G + + L+D M KP YN ++ C
Sbjct: 643 MLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRM--VKRKPFRTIYNHVIEKLCDFGN 700
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++EA+K+ + +A T + G AYKV + + PD +
Sbjct: 701 LEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEK 760
Query: 348 LVEGLVKKKKIKEA-KGVIRTIKK 370
+ + LV + EA K ++R +++
Sbjct: 761 VTKKLVLDGNLVEADKLMLRFVER 784
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 3/274 (1%)
Query: 99 YLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
YL N L+ + + G +A FD++ G SV+SFN L+ RS+ ++ +L
Sbjct: 227 YLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL-KS 285
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + +SPD +Y L+ C ++A L +EM G+ VT+TT+++ K G
Sbjct: 286 VMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHG 345
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYN 276
+ A R + M+ +G+ D+ YN I GD + ++L++EM G KPD I++
Sbjct: 346 KIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFT 405
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
LM CK+ MD A ++ + + E G + F I LC G A ++ K+ +
Sbjct: 406 TLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSA 465
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD T ++++ KK +K +++ +++
Sbjct: 466 GHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 3/229 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A+R F+ M + G +I++NAL+ R + L +E+
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN- 395
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PDKI++ L+ C G D ALE+ + M +G+E+ V +T +++ L + G +A
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDA 455
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
ER+ +M G D Y + I GD + +L+ EM+ G P ++YN LM
Sbjct: 456 ERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNG 515
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+CK M AK + + PN TF + C G+ +K+F
Sbjct: 516 FCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS-SVDFKIF 563
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
+++++ES + P + LI + + A FD+M E+G + ++F L+
Sbjct: 283 LKSVMESERISPDVFTYS---ALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLID 339
Query: 141 ACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE 200
+ D F EI K + PD I+Y L+ C G +A +LLNEM G +
Sbjct: 340 GQCKHGKIDLALRNF-EIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFK 398
Query: 201 VTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKEL 259
+T+TT+++ K G+ + A + M ++G++LD A+ I+ G + +
Sbjct: 399 PDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERM 458
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
+ +M AG KPD +Y ++ C+CK + K+ + ++ +G P T+ + C
Sbjct: 459 LKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCK 518
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
G A + + + +P+ T +L++G K
Sbjct: 519 QGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCK 553
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 220 EEAERLWSEMEKKGVDLDVAA--YNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
E+A + ++K + V Y +R P E E+ D G P+ +N
Sbjct: 172 EDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNI 231
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
LM +CK + A+ V++ + G P+ +F T I C S N ++ + V K +
Sbjct: 232 LMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGF-VLKSVMESE 290
Query: 338 KI-PDFNTVKLLVEGLVKKKKIKEAKGVI 365
+I PD T L+ GL K+ +++EA G+
Sbjct: 291 RISPDVFTYSALINGLCKESRVEEANGLF 319
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 3/292 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPR 130
L K KR ++ L+E D + + N + + G D A+ + +E
Sbjct: 284 LCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRV 343
Query: 131 SVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+ ++A++ + R DK + +E+ K PD ++Y ++ C D+A ++
Sbjct: 344 DKVGYSAIVHSFCREGRMDKAKEIVNEMFSK-GCIPDVVTYTSVINGLCQERKVDQAKKM 402
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TY 249
L +M G + TV+YT +LN L K GN+ EA + + E+ + Y+V +
Sbjct: 403 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRR 462
Query: 250 GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G +L+ EM G P + N L+ C+ E +DEAK+ E NGC+ N
Sbjct: 463 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVN 522
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
F T I+ C + + A + + + +K PD T +++ L KK +I+EA
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEA 574
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 149/299 (49%), Gaps = 15/299 (5%)
Query: 83 TLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA 141
T+++ +P ++ +CN I D A+R ++M + +VI++N L+
Sbjct: 193 TMMQKAGIEPDLS----ICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKG 248
Query: 142 -CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNE--MENKG 198
C RL D L E+P K SPDKISY ++ C K L LL E +++
Sbjct: 249 YCDLHRLEDAXE-LIAEMPFK-GCSPDKISYYTVMGFLCKE-KRIKELRLLMEKMLKDSN 305
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERL 256
+ VTY T ++ L K G+ +EA E E++ +D Y+ I +++ G ++
Sbjct: 306 LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA-IVHSFCREGRMDKA 364
Query: 257 KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYH 316
KE+++EM G PD ++Y ++ C+ +D+AKK+ + ++GC PN ++ +
Sbjct: 365 KEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNG 424
Query: 317 LCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPP 374
LC +GN +A ++ S IP+ T +L+ G ++ K EA ++R IKK F P
Sbjct: 425 LCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFP 483
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 9/294 (3%)
Query: 71 RLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG-TP 129
RL K+ RF + ++E N IT Y C LI+ Y + A +M G +P
Sbjct: 219 RLDKAVRFLERMQIVEIXPN--VIT---YNC-LIKGYCDLHRLEDAXELIAEMPFKGCSP 272
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE 189
+ + + F C R+ ++ +L +++ K NL PD+++Y + G D+ALE
Sbjct: 273 DKISYYTVMGFLCKEKRI-KELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALE 331
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
L E E + V V Y+ +++ ++G ++A+ + +EM KG DV Y I
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLC 391
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
++ K+++ +M G KP+T+SY L+ CKN EA+++ EE PNA
Sbjct: 392 QERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAI 451
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
T+ ++ G +A + +E + P + LL++ L +++K+ EAK
Sbjct: 452 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAK 505
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++ D I Y +L+ + A +L M + +E + V+ + G
Sbjct: 126 RQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKL 185
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
A R + M+K G++ D++ N I G ++ ++ M+ + P+ I+YN L
Sbjct: 186 RNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCL 245
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM--V 336
+ YC +++A ++ + GCSP+ ++ T + LC K ++ E ++
Sbjct: 246 IKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRI-KELRLLMEKMLKDS 304
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ +PD T V L K EA +R +++
Sbjct: 305 NLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEER 339
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 38/188 (20%)
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+++ ++ C + AL LL++M VTYTT+++ L K+G EEA +L +
Sbjct: 521 VNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMK 580
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
M + G P ++Y ++ YC+ +
Sbjct: 581 MLR----------------------------------VGWIPTPVTYRTVIHQYCRMGRV 606
Query: 289 DEAKKVYEG-LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
++ K+ E L C T + I LC GN ++AYK+ + + D NT +
Sbjct: 607 EDLLKLLEKMLSRQECR---TAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHM 663
Query: 348 LVEGLVKK 355
L+E + K
Sbjct: 664 LIESYLSK 671
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 134/310 (43%), Gaps = 13/310 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ K +F + E L + I ++I + + D A F M G
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 357
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+I+FN L+ R++ D L E+ + L + I+Y L+ C G + A
Sbjct: 358 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA-GLVANTITYTTLIHGFCQVGDLNAAQ 416
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK-----------KGVDLD 237
+LL EM + GV VT T+L+ L G ++A ++ M+K GV+ D
Sbjct: 417 DLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPD 476
Query: 238 VAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
V YN+ I+ G +EL +EM G+ PDTI+YN ++ CK +DEA ++++
Sbjct: 477 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFD 536
Query: 297 GLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKK 356
+ SPN TF T I C +G D ++F E + + T L+ G K
Sbjct: 537 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVG 596
Query: 357 KIKEAKGVIR 366
I A + +
Sbjct: 597 NINGALDIFQ 606
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 17/281 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y +A D ++ +M E G + I++ L+ + + L E+
Sbjct: 367 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS- 425
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMEN-----------KGVEVTTVTYTTVLN 211
+ P+ ++ LL CD+G ALE+ M+ GVE TY +++
Sbjct: 426 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILIS 485
Query: 212 CLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGL 268
L +G EAE L+ EM +G+ D YN I RL E + D M
Sbjct: 486 GLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLC--KQSRLDEATQMFDSMGSKSF 543
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ +++ L+ YCK +D+ +++ + G NA T+ T I+ GN + A
Sbjct: 544 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALD 603
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+F+E + PD T++ ++ GL K+++K A ++ ++
Sbjct: 604 IFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 54/325 (16%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELG 127
+ S R+S+ + L++ KI+ + N LI ++ + G F A +D+M G
Sbjct: 262 INGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRG 321
Query: 128 TPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
S I++++++ C ++RL D +F + K SPD I++ L+ +C + D
Sbjct: 322 IIPSTITYSSMIDGFCKQNRL-DAAEHMFYLMATK-GCSPDIITFNTLIAGYCRAKRVDD 379
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
++LL+EM G+ T+TYTT+++ + G DL+ A
Sbjct: 380 GIKLLHEMTEAGLVANTITYTTLIHGFCQVG-----------------DLNAA------- 415
Query: 247 NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE------ 300
++L+ EM +G+ P+ ++ N L+ C N + +A ++++ +++
Sbjct: 416 ----------QDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465
Query: 301 -----NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--IPDFNTVKLLVEGLV 353
NG P+ T+ I L G F +A ++++E M H+ +PD T ++ GL
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE--MPHRGIVPDTITYNSVIHGLC 523
Query: 354 KKKKIKEAKGVIRTI-KKKFPPNVL 377
K+ ++ EA + ++ K F PNV+
Sbjct: 524 KQSRLDEATQMFDSMGSKSFSPNVV 548
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 170/422 (40%), Gaps = 95/422 (22%)
Query: 34 KLRSEFDPDK----ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHK 89
KLRS F K A+D++ + + P + + + V R ++ +I H+
Sbjct: 48 KLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGV-----VVRMGRLDVVISLHR 102
Query: 90 NDPKITQEPYLCN------LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-C 142
K+ CN L++ + A+ TF ++ +LG +V++F+ LL C
Sbjct: 103 ---KMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLC 159
Query: 143 TRSRLYDKVPILFDEIPK------------------------------KYNLSPDKISYG 172
R+ + + LF ++ K + L P++I+YG
Sbjct: 160 VEDRISEALD-LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 218
Query: 173 LLLKSHCDSGSSDKALELLNEMEN-KGVEVTTVTY-----TTVLNCLYKQGNAEEAERLW 226
++ C G + AL LL +ME ++ V + T ++N G EA++L
Sbjct: 219 TIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLL 278
Query: 227 SEM-EKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGL--------------- 268
EM E+K + DV YN I N + G +EL DEM G+
Sbjct: 279 QEMLERKKISPDVVTYNALI-NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFC 337
Query: 269 --------------------KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
PD I++N L+ YC+ + +D+ K+ + E G N
Sbjct: 338 KQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 397
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T+ T I+ C G+ + A + +E V P+ T L++GL K+K+A + + +
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457
Query: 369 KK 370
+K
Sbjct: 458 QK 459
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/197 (18%), Positives = 82/197 (41%), Gaps = 9/197 (4%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV- 243
+ A++L +M + + + ++ + + G + L +ME + V + ++ +
Sbjct: 60 EDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTIL 119
Query: 244 -RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
+ + P L ++ G P ++++ L+ C + + EA ++ +
Sbjct: 120 MKCFCSCSKLPFALSTF-GKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C PN TF T + LC G +A + + P+ T +V+G+ K A
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234
Query: 363 GVIRTIKK--KFPPNVL 377
++R +++ PNV+
Sbjct: 235 NLLRKMEEVSHIKPNVV 251
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 7/262 (2%)
Query: 115 HAMRTFDQ---MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
H + FD M++ T + ++ ++ A + + D L +E+ +K ++ PD +Y
Sbjct: 193 HTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQK-SIPPDIFTY 251
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ + C + L EM + + T+ +V++ L K+G E+AE + M +
Sbjct: 252 STLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE 311
Query: 232 KGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
KGVD DV YN+ I + YG G +R +E+ D M + ++PD ISYN L+ Y + + +D
Sbjct: 312 KGVDPDVITYNM-IIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKID 370
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA +V + + G P+ T ++ L G A F E + IPD T L+
Sbjct: 371 EAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLL 430
Query: 350 EGLVKKKKIKEAKGVIRTIKKK 371
G K ++EA ++++
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERR 452
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 4/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI + + +++ F +M L +V +FN+++ C ++ D I+ I K
Sbjct: 254 LIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK- 312
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD I+Y +++ + G D+A E+ + M NK +E ++Y ++N +Q +E
Sbjct: 313 -GVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDE 371
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A ++ E+ +KG+ + NV + + G + + DEM AG PD ++ L+
Sbjct: 372 AMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLG 431
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y KN +++EA + LE N + I LC +G DKA+ F++ ++ P
Sbjct: 432 GYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHP 491
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
D T ++ G ++ + EAK ++R ++
Sbjct: 492 DVITYTAMISGYCQEGLLDEAKDMLRKME 520
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 128/268 (47%), Gaps = 4/268 (1%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A F QM SV SF+ LL A + Y V LF EI K + +
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREI-HKLRIPVHEFILS 111
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+++ S C +D +L KG+ VT+TT++ L+ + ++A L+ ++ ++
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRE 171
Query: 233 GV-DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+ + + Y + G ++ +L+ M KP+T +Y ++ +CK+ M+D
Sbjct: 172 NICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDG 231
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A + +++ P+ T+ T I LC ++ +F E + ++ P+ T +++
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVID 291
Query: 351 GLVKKKKIKEAKGVIR-TIKKKFPPNVL 377
GL K+ K+++A+ ++R I+K P+V+
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVI 319
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D AM+ ++ + G S+++ N LL FDE+
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++ PD ++ LL + +G ++A+ +++E + + YT V++ L K G ++A
Sbjct: 419 HI-PDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKA 477
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ ++ G+ DV Y I+ G + K+++ +M D G D +YN ++
Sbjct: 478 HATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRG 537
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ ++ + E K E + S A T
Sbjct: 538 FLRSNKVSEMKAFLEEIAGKSFSFEAAT 565
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C L+ Y + G+ + AM F +++ ++ + A++ ++ DK F+++P
Sbjct: 427 CTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPL 486
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
L PD I+Y ++ +C G D+A ++L +ME+ G TY ++ +
Sbjct: 487 -IGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVS 545
Query: 221 EAERLWSEMEKKGVDLDVA 239
E + E+ K + A
Sbjct: 546 EMKAFLEEIAGKSFSFEAA 564
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 21/334 (6%)
Query: 48 YSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSY 107
Y++V K S+ A D+ V+R+AK E + P + +I +
Sbjct: 198 YNTVIKSLCGDSRSQEALDM-VQRMAK-----------EGGRCSPDVVS---FNTVIHGF 242
Query: 108 GQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPD 167
+ G A F++M + G V ++N+++ A ++R DK + ++ K + PD
Sbjct: 243 FKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK-GVEPD 301
Query: 168 KISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWS 227
++Y ++ + SG ++ ++ +M +KG+ TVT+++ ++ L K G +++AE ++
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361
Query: 228 EMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKN 285
M KG D+ +Y++ + + Y G + L M D G+ + N L++ + K
Sbjct: 362 YMTTKGHMPDIVSYSI-LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKR 420
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
MMDEA V+ ++ G PN T+ T I C G A + F + + + P+
Sbjct: 421 GMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVY 480
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNVL 377
L+ G + +AK I + K PN++
Sbjct: 481 HSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIV 514
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHC 179
F M G ++S++ LL + + LF + K + + +L+ +H
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK-GIVSNCHCINILISAHA 418
Query: 180 DSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
G D+A+ + EM+ +GV VTY+T+++ + G +A +S+M G++ + A
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTA 478
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGL-KPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y+ I GD + KE I EM GL +P+ + ++ ++ C + +A+ V+
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ G P TF + I C G +KA+ V V V PD T LV G K K
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598
Query: 358 IKEAKGVIR-TIKKKFPPNVL 377
I + + R + KK P +
Sbjct: 599 IDDGLILFREMLHKKVKPTTV 619
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 5/247 (2%)
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
P +V ++ L+ C R+R D P + + L I LK C + +D+A+
Sbjct: 121 PLTVRTYGILMDCCCRARRPDLGPAFVARLLRA-GLKTGTIQATTFLKCLCHAKRTDEAV 179
Query: 189 E-LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG--VDLDVAAYNVRI 245
+ LL+ M ++Y TV+ L ++EA + M K+G DV ++N I
Sbjct: 180 DVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI 239
Query: 246 TNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
+ G+ + L +EM G+ PD +YN ++ CK MD+A+ V + + G
Sbjct: 240 HGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVE 299
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
P+ T+ I+ SG++ ++ K+F++ IPD T + L K + K+A+ +
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359
Query: 365 IRTIKKK 371
+ + K
Sbjct: 360 FQYMTTK 366
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 9/292 (3%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+K F I ++ + P I + ++I S G A F+ + +G +
Sbjct: 493 LVKAKEF--ISEMMSKGLHRPNIV---FFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPT 547
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
+++FN+L+ C ++ +L + + PD ++ L+ +C SG D L L
Sbjct: 548 IVTFNSLIDGYCLVGKMEKAFGVL--DAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
EM +K V+ TTVTY VL+ L + G A++++ EM G +D+ Y + +
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 251 GD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
D + L ++ K D N ++ K +EA ++ + +G PN +T
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ I +L G+ ++A +F P + ++ L++K I +A
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPR-SVISFNALLFA-CTRSRLYDKVPILFDEIP 159
+LI + G A +M G R +++ F++++ + C R+ D + +
Sbjct: 482 SLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVF--NLV 539
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
P +++ L+ +C G +KA +L+ M + G+E VT T+++ K G
Sbjct: 540 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKI 599
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFL 278
++ L+ EM K V YN+ + G K++ EM D+G D +Y L
Sbjct: 600 DDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 659
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ C+N++ DEA ++ L C + T T I L ++A +F
Sbjct: 660 LKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGL 719
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P+ +T +++ L+K+ ++EA + +++K
Sbjct: 720 VPNVSTYGVMIRNLLKEGSVEEADTMFSSMEK 751
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S++AL R Y F+++ +
Sbjct: 86 MIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +L+ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGVLIENFCKAGQYDQA 345
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 106/221 (47%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G ++++L +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ + V I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + +EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKY 285
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I ++ LL + + + E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YG+L+++ C +G D+
Sbjct: 286 -LAPTDNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQ 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKWGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +Y+ L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 134/266 (50%), Gaps = 12/266 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I Y + G A++ + Q+ E G ++++FN+L++ +R + L D I K +
Sbjct: 532 MIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI-KLH 590
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L P+ ++Y L+ +C+ G+ LELL+EM+ K + T +TYT V+ L KQ +E+
Sbjct: 591 GLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQES 650
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M+ G+ D +YN I D + +L D+M L+P +++YN L+
Sbjct: 651 CQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILING 710
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK--- 338
+C + +A + L+ + N + T I C G+ DKA F++ MV K
Sbjct: 711 FCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQ--MVEKGFE 768
Query: 339 --IPDFNTVKLLVEGLVKKKKIKEAK 362
I D++ V + L K+ + EAK
Sbjct: 769 VSIRDYSAV---IGRLCKRCLVTEAK 791
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 161/408 (39%), Gaps = 86/408 (21%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D A+D Y +S + SR+++ + LA+ KR +++ +++ P
Sbjct: 105 DADSAVDFYYLLSNEFGFQ-HSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPS 163
Query: 100 LCNLIR------------------SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF- 140
LC L+ +Y ++ M A+ +M +L S+ ++N+LL+
Sbjct: 164 LCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYN 223
Query: 141 --------------------------------ACTRSRLYDKVPIL-------------- 154
C +SR D V
Sbjct: 224 LRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVS 283
Query: 155 FDEIPKKY-------------------NLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
F+ I +Y L PD SY +L+ C +GS +AL+L N+ME
Sbjct: 284 FNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDME 343
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPE 254
N G+E VTY + G A + +M KG + ++ Y V I + G+ E
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVE 403
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+L EM G + IS L+ CK+ +D A K++ +E NG P+ T+ T I
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLI 463
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
+ LC G +A ++++ IP+ ++ GL +K KI +A+
Sbjct: 464 HGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQAR 511
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G A+ +++M P S+I L+ C + ++ + + FD +
Sbjct: 462 LIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKI-SQARMYFDYLITS 520
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NLS D I Y +++ + G++ +A++L ++ KG+ T VT+ +++ +
Sbjct: 521 -NLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQ 579
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A RL ++ G++ + Y + N Y G+ + L EL+ EM+ + P I+Y ++
Sbjct: 580 ARRLLDTIKLHGLEPNAVTYTT-LMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + E+ ++ E ++ G +P+ ++ T I C + + KA++++ + ++ +
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
P T +L+ G +K+A ++ +++ +
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSLQNR 730
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 119/257 (46%), Gaps = 12/257 (4%)
Query: 70 RRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP 129
R+L++++R D I+ H +P L N+ Y + G + +M
Sbjct: 575 RKLSQARRLLDT---IKLHGLEPNAVTYTTLMNV---YCEEGNMQSLLELLSEMKAKAIG 628
Query: 130 RSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+ I++ ++ C + +L + +L D L+PD++SY ++++ C + KA
Sbjct: 629 PTHITYTVVIKGLCKQWKLQESCQLLEDM--DAVGLTPDQVSYNTIIQAFCKARDMRKAF 686
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+L ++M +E T+VTY ++N G+ ++A+ L ++ + V+L+ AY I +
Sbjct: 687 QLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
GD ++ +M + G + Y+ ++ CK ++ EAK + + +G P+
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQ 806
Query: 308 TTFRTWI--YHLCGSGN 322
F + +H CG N
Sbjct: 807 DLFEVLLNAFHQCGHLN 823
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I+++ +A A + +D+M + +++N L+ C L D +L +K
Sbjct: 672 IIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRK 731
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
NL +K +Y ++K+HC G DKA+ +M KG EV+ Y+ V+ L K+ E
Sbjct: 732 VNL--NKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTE 789
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAG 267
A+ + M GV D + V + + G EL+ EM +G
Sbjct: 790 AKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 94 ITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
+ + LC++ + AG +D AM+ + + E G P SV++FN+++ A + L ++
Sbjct: 428 LLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAF 487
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
+ I K+ L+P + LL S GS D+A L +M +KG VT + +T +L+
Sbjct: 488 YAYG-IMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDG 546
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
++ G AE LW+EM+ +GV D A+ I G ++ +M G P+
Sbjct: 547 YFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPN 606
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
YN L+ +CK ++EA K+ + + G P+ T I LC G A + F
Sbjct: 607 NFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFM 666
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ + PD T L++G K + A
Sbjct: 667 DMCRMGLSPDIVTYNTLIDGYCKAFDVGGA 696
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 142/347 (40%), Gaps = 42/347 (12%)
Query: 66 DLTVRRLAKSK-RFSDIETLIESHKNDPKITQEP-YLCNLIRSYGQAGMFDHAMRTFDQM 123
D ++ KS+ F +E L S + +T P + L R +AG + F +
Sbjct: 191 DTLMQAFVKSEMHFEALEIL--SKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV 248
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
G + +FN L+ R + + ++ + K+ PD SY +++ ++C G
Sbjct: 249 VRKGPCPNNFTFNLLILEFCR-KGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQ 307
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
S AL LLN M G + + T+ T+++ K+GN E A + + E+E G+ + YN+
Sbjct: 308 SSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNI 367
Query: 244 RITNTYGG-DPERLKELIDEMRDAGLKPDTISYNFLMTCY-------------------- 282
I+ D + L +EMR + PD I++N L+ +
Sbjct: 368 MISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSG 427
Query: 283 ---------------CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
C DEA K+ E L E G P+ F + I +G ++A+
Sbjct: 428 LLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAF 487
Query: 328 KVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK-GVIRTIKKKFP 373
+ V P +T L+ LV+K + EA + I K FP
Sbjct: 488 YAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFP 534
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 6/279 (2%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+L+ S + G D A M + G P + ++F LL R + L++E+ K
Sbjct: 507 SLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEM-KG 565
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +++ + C SG A ++ ++M KG Y +++ K G E
Sbjct: 566 RGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNE 625
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDA---GLKPDTISYNFL 278
A +L EM K+G+ D+ N+ I R+K I+ D GL PD ++YN L
Sbjct: 626 ALKLVREMNKRGLLPDIFTVNMIICGL--CKQGRMKLAIETFMDMCRMGLSPDIVTYNTL 683
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ YCK + A + + ++G P+ TT+ I+ C ++A + +E + V
Sbjct: 684 IDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGI 743
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVL 377
+P+ T ++ + + +K F PN +
Sbjct: 744 VPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTV 782
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 135/308 (43%), Gaps = 37/308 (12%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
C +I ++ + G + A + FD+++++G ++ I +N ++ ++R + +LF+E+
Sbjct: 330 FCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMR 389
Query: 160 KKYNLSPDKISYGLLLKSH-----------------------------------CDSGSS 184
K ++ PD I++ L+ H C +G
Sbjct: 390 TK-DIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRY 448
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA-AYNV 243
D+A++LL + KG+ + V + +++ G E A + M K G+ + ++
Sbjct: 449 DEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSL 508
Query: 244 RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
I+ G + + +M D G +++ L+ Y + ++ A+ ++ ++ G
Sbjct: 509 LISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGV 568
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
P+A F +I LC SG AY VF + + +P+ L+ G K K+ EA
Sbjct: 569 FPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALK 628
Query: 364 VIRTIKKK 371
++R + K+
Sbjct: 629 LVREMNKR 636
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 38/282 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ Y + G + A +++M G ++F A + C + D + D + K
Sbjct: 543 LLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKG 602
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P+ Y L+ C G ++AL+L+ EM +G+ T ++ L KQG +
Sbjct: 603 F--VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKL 660
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + +M + G+ D+ YN I D +L+ +M D+G +PD +YN +
Sbjct: 661 AIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIH 720
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI-------------------------- 314
YC ++ A + E L G PN T+ T I
Sbjct: 721 GYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPN 780
Query: 315 --------YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
C G +KA ++ +H D T KL+
Sbjct: 781 TVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLM 822
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + + G + A++ +M++ G + + N ++ C + R+ + D
Sbjct: 612 SLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMC-- 669
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ LSPD ++Y L+ +C + A +L+ +M + G E TY ++
Sbjct: 670 RMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKIN 729
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + E+ G+ + YN I + L ++ P+T++ N L++
Sbjct: 730 RAVMILEELISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLS 789
Query: 281 CYCKNEMMDEA 291
+CK M ++A
Sbjct: 790 QFCKQGMPEKA 800
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 42/321 (13%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDH---AMRTFDQM 123
L + RLA ++RFSD+E L+ + + + + LI+ YG +H AM T M
Sbjct: 76 LMIDRLACARRFSDVEELLSKARTEKLRFSDEFFYRLIKMYGNVA--EHPQKAMDTLFAM 133
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
S +FN +L R Y+ V ++ P+ ++ D S+ +L+K C G
Sbjct: 134 PGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPR-LGVTLDTCSFNILVKGLCQYGK 192
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
D+A+ LL+EM +G + TY+T ++ L ++ ++A L+ M K+ D+AA
Sbjct: 193 FDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQ----DIAA--- 245
Query: 244 RITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
DT+ YN L++ C++E + EA +++ + GC
Sbjct: 246 ---------------------------DTVVYNILISGLCRDERVTEAFDLFKSMTSEGC 278
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN+ T++ + L G +A + P F + KLL++GL + +A
Sbjct: 279 CPNSGTYQVLLDGLISLGKLFEAKSLVCTMSTEGVRPSFQSYKLLIDGLCSDDCVGDAHL 338
Query: 364 VIR-TIKKKFPPNVLRAWKKV 383
V++ + + F P + W K+
Sbjct: 339 VLKQMVGQGFVPR-MGTWTKL 358
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 5/216 (2%)
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
KA++ L M +T T+ VL+ L + E ++S + GV LD ++N+ +
Sbjct: 125 KAMDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRLGVTLDTCSFNILV 184
Query: 246 TN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
YG E + L+ EM G +P+ +Y+ M C+ +D+A +++E + +
Sbjct: 185 KGLCQYGKFDEAI-SLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDI 243
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
+ + + I LC +A+ +FK P+ T ++L++GL+ K+ EAK
Sbjct: 244 AADTVVYNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKS 303
Query: 364 VIRTIKKKFPPNVLRAWKKVEEELGLVPAPAVGDGQ 399
++ T+ + +++K + + GL VGD
Sbjct: 304 LVCTMSTEGVRPSFQSYKLLID--GLCSDDCVGDAH 337
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 2/306 (0%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
L ++ A+ + + L++ D T LI S G+AG+ A+ F +
Sbjct: 154 LLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTF 213
Query: 127 GTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDK 186
S+NA+L + + Y + ++ ++ + SPD ++Y +LL ++ G D+
Sbjct: 214 NYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED-GFSPDVLTYNILLWTNYRLGKMDR 272
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
L +EM G + TY +L+ L K A + M++ G+D V Y I
Sbjct: 273 FDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLID 332
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
+ G+ E K +DEM AG +PD + Y ++T Y + +D+AK+++ + G P
Sbjct: 333 GLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ + I LC +G F +A + KE P+F LV L K K+ EA+ VI
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
Query: 366 RTIKKK 371
R + KK
Sbjct: 453 REMVKK 458
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 90/242 (37%), Gaps = 38/242 (15%)
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVT------------------------ 205
SY LL+K + G L++EM G T T
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 206 -----------YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDP 253
Y +LN L + E ++ +M + G DV YN+ + TN G
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+R L DEM G PD+ +YN L+ K A ++E G P+ + T
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR--TIKKK 371
I L +GN + E V PD +++ G V ++ +AK + R T+K +
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 372 FP 373
P
Sbjct: 391 LP 392
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 91 DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDK 150
DP + LI +AG + D+M + G V+ + ++ S DK
Sbjct: 321 DPSVLHYT---TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
+F E+ K L P+ +Y +++ C +G +A LL EME++G V Y+T++
Sbjct: 378 AKEMFREMTVKGQL-PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 211 NCLYKQGNAEEAERLWSEMEKKG 233
+ L K G EA ++ EM KKG
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKG 459
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 148/314 (47%), Gaps = 5/314 (1%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K+ R + E L + + + +I YG AG F+ A + +++ E G S
Sbjct: 28 LCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPS 87
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+SFN++L + R D+ LF+ + K + P+ +Y +++ C G ++A +L
Sbjct: 88 VVSFNSILTCLGKKRKVDEALSLFEVMKK--DAEPNSSTYNIIIDMLCLGGRVEEAYRIL 145
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+EME+ + +T +++ L K EEA +++ ++G + D Y + + G
Sbjct: 146 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTY-CSLIDGLGK 204
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
G + L ++M DAG + + Y L+ + + ++ K+++ L GC P+ T
Sbjct: 205 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 264
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T++ + +G +K +F++ +PD + +L+ GL K + +E + +K
Sbjct: 265 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 324
Query: 370 KKFPPNVLRAWKKV 383
++ RA+ V
Sbjct: 325 QQGFALDARAYNAV 338
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 6/264 (2%)
Query: 109 QAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDK 168
+AG + F+ + G V S++ L+ T++ + +F + K+ + D
Sbjct: 274 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM-KQQGFALDA 332
Query: 169 ISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
+Y ++ C SG KA E+L EM+ K V+ T TY +++ L K +EA L+ E
Sbjct: 333 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 392
Query: 229 MEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKN 285
+ KG++L+V Y+ I G R+ E +++EM GL P+ ++N L+ K
Sbjct: 393 AKSKGIELNVVLYSSLIDGF--GKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKA 450
Query: 286 EMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
E ++EA ++ ++E C PN T+ I LC ++KA+ +++ +P+ T
Sbjct: 451 EEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTY 510
Query: 346 KLLVEGLVKKKKIKEAKGVIRTIK 369
++ GL K I +A + K
Sbjct: 511 TTMISGLAKVGNITDAYSLFERFK 534
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 55 YASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFD 114
+AS + ++ V RL K+++ + + ES C+LI G+ G D
Sbjct: 150 HASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVD 209
Query: 115 HAMRTFDQMDELGTPRSVISFNALL---FACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
A R F++M + G + + + +L+ F R K+ F E+ ++ PD
Sbjct: 210 EAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI---FKELIRR-GCKPDLTLL 265
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
+ +G +K + ++ + G +Y+ +++ L K G A E ++ M++
Sbjct: 266 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 325
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+G LD AYN + G + E+++EM++ ++P +Y ++ K + +DE
Sbjct: 326 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 385
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A ++E + G N + + I G D+AY + +E + P+ T L++
Sbjct: 386 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 445
Query: 351 GLVKKKKIKEAKGVIRTIKK-KFPPN 375
LVK ++I EA +++K+ K PPN
Sbjct: 446 ALVKAEEINEALVCFQSMKEMKCPPN 471
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 114/218 (52%), Gaps = 3/218 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A + F ++ G +S+ ++++ ++ + LF ++ + ++ P +Y ++
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMI 60
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ +G + A +LL + +G + V++ ++L CL K+ +EA L+ E+ KK +
Sbjct: 61 MGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAE 119
Query: 236 LDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ + YN+ I GG E ++DEM A L P+ ++ N ++ CK ++EA K+
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+E + GC+P+ T+ + I L G D+AY++F++
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK 217
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
+ E++ GLKPD +SY ++ CK + EA++++ +E P A + T I
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
+G F+ AYK+ + IP + ++ L KK+K+ EA + +KK PN
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 108/262 (41%), Gaps = 37/262 (14%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +AG F M + G ++NA++ +S K + +E+ +K
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK- 361
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +YG ++ D+A L E ++KG+E+ V Y+++++ K G +EA
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP--------ERLKEL--------------- 259
+ EM KKG+ +V +N + + + +KE+
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILING 481
Query: 260 -------------IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
+M+ GL P+ ++Y +++ K + +A ++E + NG P+
Sbjct: 482 LCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 541
Query: 307 ATTFRTWIYHLCGSGNFDKAYK 328
A +F I + + +AY+
Sbjct: 542 AASFNALIEGMSNANRAMEAYQ 563
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 152/322 (47%), Gaps = 6/322 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D A++I+ ++ + SP + + L + K E + + + K ++ Y
Sbjct: 166 DSAVEIWRNMVRKGFSP-DEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYN- 223
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + QAG D A M G ++++N LL C L ++ L ++ +
Sbjct: 224 SLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERS 283
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKA-LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ PD SY LLK C + DKA + ++N+ME KG+ V+Y T++ L + +
Sbjct: 284 -GVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGL-CDVVSYNTIIKALCTASHTK 341
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
A +L+ EM KG+ DV + + I G K+L+D+M GL PD + Y ++
Sbjct: 342 RAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIV 401
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK M A V+ + E+G +P+ ++ I LC + +A ++++
Sbjct: 402 DHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPC 461
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
PD T KL++ GL+ +KK+ A
Sbjct: 462 PDEVTFKLIIGGLIWEKKLSVA 483
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 120/293 (40%), Gaps = 35/293 (11%)
Query: 104 IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE-IPKKY 162
I SY +AG+ D A++TFD+M + I +N + R +D +D IP+ +
Sbjct: 16 ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75
Query: 163 NLS---------------------------------PDKISYGLLLKSHCDSGSSDKALE 189
+L+ PD +Y + L C D AL
Sbjct: 76 SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALG 135
Query: 190 LLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-T 248
++ M KG E VTYT V+N L + G + A +W M +KG D A +
Sbjct: 136 VVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLC 195
Query: 249 YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
+ G + EL +K YN L+ +C+ +D+A+ + + NGC P+
Sbjct: 196 HDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLV 255
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
T+ + + C ++A + K+ PD + L++GL K ++ +A
Sbjct: 256 TYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKA 308
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 133/300 (44%), Gaps = 12/300 (4%)
Query: 72 LAKSKRFSDIETLIESHKN---DPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
L K K F IE L+E P I NL+ Q D A+ M E G
Sbjct: 89 LCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ---LDVALGVVQTMVEKGR 145
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
++++ ++ R+ +D ++ + +K SPD+ + L+ C G D A
Sbjct: 146 EPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRK-GFSPDEKACRALVLGLCHDGKVDLAY 204
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
EL ++ + Y +++N + G ++A+ + S M + G + D+ YNV +
Sbjct: 205 ELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLN-- 262
Query: 249 YGGDPERLKEL---IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
Y D L+E + +M +G++PD SYN L+ CK +D+A + E
Sbjct: 263 YCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLC 322
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ ++ T I LC + + +AYK+F+E PD T +L++ +++ AK ++
Sbjct: 323 DVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLL 382
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L +++Y + S+ +G D+AL+ +EM V ++ Y + L +Q + A
Sbjct: 4 SLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLA 63
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE-LIDEMRDAGLKPDTISYNFLMTC 281
E+ + M +G L+ Y+ I+ L E L+++M G PD +YN +
Sbjct: 64 EQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNL 123
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C +D A V + + E G P+ T+ I LC +G FD A ++++ V PD
Sbjct: 124 LCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPD 183
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
+ LV GL K+ A
Sbjct: 184 EKACRALVLGLCHDGKVDLA 203
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 129/318 (40%), Gaps = 43/318 (13%)
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLF 140
++T++E + +T + L R AG FD A+ + M G + AL+
Sbjct: 137 VQTMVEKGREPDIVTYTIVINGLCR----AGRFDSAVEIWRNMVRKGFSPDEKACRALVL 192
Query: 141 A-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
C ++ + + + S K Y L+ C +G DKA +++ M G
Sbjct: 193 GLCHDGKVDLAYELTVGAMRGRIKFS--KSIYNSLINGFCQAGWIDKAQSIISFMRRNGC 250
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV---------RITNTY- 249
E VTY +LN + EEAE L +ME+ GV+ DV +YN R+ Y
Sbjct: 251 EPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYM 310
Query: 250 --------------------------GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+R +L +EM G+ PD +++ L+ +
Sbjct: 311 MMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFL 370
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
+ + AKK+ + + G P+ + T + HLC +G A+ VF + V PD
Sbjct: 371 REGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVV 430
Query: 344 TVKLLVEGLVKKKKIKEA 361
+ L+ GL + ++ EA
Sbjct: 431 SYNALINGLCRASRVSEA 448
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 103 LIRSYGQAGMFDHA-MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
L++ +A D A M ++M+ G V+S+N ++ A + + LF+E+ K
Sbjct: 295 LLKGLCKANRLDKAYMMMVNKMEAKGLC-DVVSYNTIIKALCTASHTKRAYKLFEEMGGK 353
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD +++ +L+K+ GSS+ A +LL++M G+ V YTT+++ L K G
Sbjct: 354 -GITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGM 412
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A ++ +M + G+ DV +YN I R+ E L ++M G PD +++ +
Sbjct: 413 AHSVFCDMVESGITPDVVSYNALINGL--CRASRVSEAMHLYEDMHTGGPCPDEVTFKLI 470
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+ + + A +V++ + E G + + T +
Sbjct: 471 IGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLV 506
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 3/152 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGT-PRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI+++ + G + A + DQM LG P V+ + C ++ + D +
Sbjct: 365 LIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVES- 423
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD +SY L+ C + +A+ L +M G VT+ ++ L +
Sbjct: 424 -GITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSV 482
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDP 253
A R+W +M +KG LD A + + D
Sbjct: 483 ACRVWDQMMEKGFTLDGAVSETLVNAIHSNDA 514
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 240 AYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
AY +I++ G ++ + DEM + + +I YN + + D A++ Y+ +
Sbjct: 11 AYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRM 70
Query: 299 EENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKI 358
G S N+ T+ +I LC NF K+ ++ + +PD + + L + ++
Sbjct: 71 IPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQL 130
Query: 359 KEAKGVIRTIKKK 371
A GV++T+ +K
Sbjct: 131 DVALGVVQTMVEK 143
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 128/276 (46%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R G A F M + +P ++IS+ ++ +SR DK LF ++ K
Sbjct: 177 VLRGLCSGGKISMAWEVFKDMSGIFSP-NLISYTIMIDGLCKSRKVDKAITLFKQMVDK- 234
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++YG L+ +A +L E KG T VTY T+++ L K G E A
Sbjct: 235 AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENA 294
Query: 223 ERLWSEMEKK-GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L+ +M ++ + D+ Y+ I E+ EL +EM D G PD ++YN L+
Sbjct: 295 LTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLD 354
Query: 281 CYCKNEMMDEAKKVYEGLE-ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK+ D+A +++ + N C PN T+ I C A K+ KE +
Sbjct: 355 GLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLL 414
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
PD T +++ L K+ +I EA + +I K P+
Sbjct: 415 PDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPD 450
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 7/325 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
DP+ A +++ K + +R+ + + K++R D +SH + E
Sbjct: 81 DPNTAWEVFQWAGKQ-SKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVS 139
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L+ + +AG A+ F +M + G + S N +L +F ++
Sbjct: 140 YNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDMS 198
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ SP+ ISY +++ C S DKA+ L +M +K + VTY +++ L KQ
Sbjct: 199 GIF--SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRV 256
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM-RDAGLKPDTISYNF 277
+EA L+ E KG V YN I G E L D+M R+ LKPD +Y+
Sbjct: 257 KEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSA 316
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ + ++A ++YE + + GCSP+ T+ T + LC SG DKA ++F++ + +
Sbjct: 317 LINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGN 376
Query: 338 KI-PDFNTVKLLVEGLVKKKKIKEA 361
P+ T +L++ K ++ +A
Sbjct: 377 VCDPNVITYTVLIDRFCKVDRLGDA 401
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 8/277 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI G+ A F++ G +V+++N ++ + + L+D++ ++
Sbjct: 246 LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREP 305
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L PD +Y L+ S +KA EL EM + G VTY T+L+ L K G ++A
Sbjct: 306 HLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKA 365
Query: 223 ERLWSEMEKKGV-DLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
++ +M V D +V Y V I D RL + L EM L PD +++ +
Sbjct: 366 MEIFRKMGVGNVCDPNVITYTVLIDRFCKVD--RLGDAVKLAKEMEGRSLLPDAVTFTTV 423
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ CK +DEA +++E + + C P++ F T + C D A K+ +
Sbjct: 424 IQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGC 482
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPP 374
P T LV G + + +A + I+ FPP
Sbjct: 483 APTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 138/311 (44%), Gaps = 9/311 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA+ ++ + P Y + L K +R + L E +
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGA--LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 279
Query: 102 NLIRSYGQAGMFDHAMRTFDQM-DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+I + G ++A+ +D M E + +++AL+ S +K L++E+
Sbjct: 280 TMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLD 339
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV-EVTTVTYTTVLNCLYKQGNA 219
SPD ++Y LL C SG DKA+E+ +M V + +TYT +++ K
Sbjct: 340 T-GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRL 398
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAG--LKPDTISYNF 277
+A +L EME + + D + I R+ E + G KPD++ +N
Sbjct: 399 GDAVKLAKEMEGRSLLPDAVTFTTVIQKLC--KESRIDEAHELFESIGKTCKPDSVLFNT 456
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ YCK +D+AKK+++ + ++GC+P T+ + C +G + A ++ E + +
Sbjct: 457 MLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMG 516
Query: 338 KIPDFNTVKLL 348
P+ + +L+
Sbjct: 517 FPPERHLAELV 527
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEM 263
T +L+ K E+A + K + D +YN + + GD ++ L EM
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
+D+G+ S+N ++ C + A +V++ + SPN ++ I LC S
Sbjct: 164 KDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMS-GIFSPNLISYTIMIDGLCKSRKV 221
Query: 324 DKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
DKA +FK+ V PD T L++GL K++++KEA + + K
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 269
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGILIENFCKAGQYDKA 345
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YG+L+++ C +G DK
Sbjct: 286 -LAPTDNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNLMIEYLCNNGQASKAETLVRQLMKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Brachypodium distachyon]
Length = 721
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 24/319 (7%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQ-------M 123
L K KR S++ +L+ + +ND + + N LI + G D A+ + +
Sbjct: 276 LCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRV 335
Query: 124 DELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS 183
DE+G V SF C R+ + I+ + I K+ + PD ++Y ++ C G
Sbjct: 336 DEVGYSAVVHSF------CLNGRMAEAKEIVGEMISKECH--PDVVTYSAVVDGFCRIGE 387
Query: 184 SDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV 243
D+A +++ M G + VT+T +LN L K G + EA W + K G D +
Sbjct: 388 IDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEA---WELLNKSGEDWWTPSDIT 444
Query: 244 RITNTYGGDPE-RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
+G E +LKE ++ +M G P T+ N L+ CK EAK+ E +
Sbjct: 445 YSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQ 504
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
GC+ N F T I+ G+ + A + + + ++ PD T ++V L +K ++K
Sbjct: 505 SKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLK 564
Query: 360 EAKGVI-RTIKKKFPPNVL 377
EA G++ + + + P ++
Sbjct: 565 EATGLVEKMLNRGLVPTLV 583
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKI 169
G D A+ D+M +G V+++N L+ C+ R+ + + ++ + K PDKI
Sbjct: 210 GRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMI--GVMLKNGCPPDKI 267
Query: 170 SYGLLLKSHCDSGSSDKALELLNEMEN-KGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE 228
SY ++ C + LL M N G+ VTY +++ L K G+A+EA E
Sbjct: 268 SYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRE 327
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
E K +D Y+ + + G KE++ EM PD ++Y+ ++ +C+
Sbjct: 328 SEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGE 387
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+D+A+K+ + + +NGC PN T + LC G +A+++ +S P T +
Sbjct: 388 IDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSV 447
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
++ G ++ K+KE+ V+ + +K FP V
Sbjct: 448 VMHGFRREGKLKESCDVVAQMLQKGFFPTTV 478
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 9/228 (3%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P + LL+ + C G +A E + + ++KG + V +TTV++ +QG+ E A L
Sbjct: 475 PTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSL 534
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCY 282
++ DV Y V + N G RLKE L+++M + GL P ++Y ++ Y
Sbjct: 535 LDDLYLSNRHPDVVTYTV-VVNALG-RKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRY 592
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ ++E + + + + + I LC G ++AY + + + D
Sbjct: 593 CEKGTVEELVDLLDKMLAR--QELKSVYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDA 650
Query: 343 NTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVLRAWKKVEEELGL 389
T +L+E + + +A V R ++ P+ L+ +KV++ L L
Sbjct: 651 QTCHILMESFLNRGLTIQAYNVACRMFQRNLIPD-LKLCQKVDDRLVL 697
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 120/268 (44%), Gaps = 6/268 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ + + G D A + M + G ++++ ALL + + L ++ + +
Sbjct: 378 VVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDW 437
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+P I+Y +++ G ++ +++ +M KG TTV +++ L K+G EA
Sbjct: 438 -WTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEA 496
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + + KG ++V + I + GD E L+D++ + PD ++Y ++
Sbjct: 497 KEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNA 556
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ + EA + E + G P T+RT I+ C G ++ + + + ++
Sbjct: 557 LGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKS 616
Query: 342 -FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+N V +E L K+ EA G++ +
Sbjct: 617 VYNQV---IEKLCAFGKLNEAYGLLSKV 641
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 156/377 (41%), Gaps = 29/377 (7%)
Query: 8 RRLC-TATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQD 66
RRLC TA ++ ++ +++SVS K E P+ L S SR +D
Sbjct: 19 RRLCGTAASSLPAAGELAAVSVSTTK-----ELAPEDDLSEESR----------SRLVRD 63
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
T R L +R S L ++ ++ P + ++R+ Q G A F D
Sbjct: 64 -TCRLL--EQRGSWTPKLEAQLRHLLRVLSPPQVRAVLRAQAQ-GDARAAFEFFRWADRQ 119
Query: 127 GTPRSVIS-FNALLFACTRSRLYDKVP-ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS 184
R F+ +L +R+RL+D ++ I + P + ++ L+ S+ +G
Sbjct: 120 WQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAH--LMLSYSRAGKL 177
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
A+ +L M+ G +N L G ++A M + GV+ DV YN
Sbjct: 178 RSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCL 237
Query: 245 ITN--TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN- 301
I + E L E+I M G PD ISY +M+ CK + + E + + + +
Sbjct: 238 IKGLCSVRRVVEAL-EMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDA 296
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
G + T+ I+ L G+ D+A + +ES D +V ++ EA
Sbjct: 297 GLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEA 356
Query: 362 KGVI-RTIKKKFPPNVL 377
K ++ I K+ P+V+
Sbjct: 357 KEIVGEMISKECHPDVV 373
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 185/434 (42%), Gaps = 78/434 (17%)
Query: 10 LCTATTAAGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTV 69
LC + AG+S+ ++S+ K+ + D A+ ++ + K P +++ L+
Sbjct: 28 LCWERSFAGASSDDCRENLSR---KVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSA 84
Query: 70 RRLAKSKRFSDIETLIESHKNDPKITQEPYLCNL-IRSYGQAGMFDHAMRTFDQMDELGT 128
+AK +F + +L E +N I+ Y ++ I + + A+ +M +LG
Sbjct: 85 --IAKMNKFDLVISLGEQMQN-LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGY 141
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYN------------------------ 163
S+++ N+LL C +R+ + V ++ + Y
Sbjct: 142 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 164 ---------LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
PD ++YG ++ C G D AL LLN+ME +E V Y T+++ L
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYG--GDPERL-------------- 256
K + ++A L+++ME KG+ DV YN I+ YG D RL
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 257 ------------------KELIDEM-RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
++L DEM + PD ++YN L+ +CK + ++E +V+
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ + G N T+ T I+ + + D A VFK+ V PD T +L++GL
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 358 IKEAKGVIRTIKKK 371
++ A V ++K+
Sbjct: 442 VETALVVFEYMQKR 455
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 142/314 (45%), Gaps = 9/314 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETL---IESHKNDPKITQ 96
+PD AL++ + + K Y + + L K K D L +E+ P +
Sbjct: 230 EPDLALNLLNKMEKGKIEADVVIY--NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFD 156
L + + +YG+ + A R M E ++ FNAL+ A + + L+D
Sbjct: 288 YNPLISCLCNYGR---WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Query: 157 EIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQ 216
E+ K + PD ++Y L+K C ++ +E+ EM +G+ TVTYTT+++ ++
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 217 GNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISY 275
+ + A+ ++ +M GV D+ YN+ + G+ E + + M+ +K D ++Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
++ CK +++ ++ L G PN T+ T + C G ++A +F E
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 336 VHKIPDFNTVKLLV 349
+P+ T L+
Sbjct: 525 DGPLPNSGTYNTLI 538
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 112/226 (49%), Gaps = 3/226 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + + + M F +M + G + +++ L+ ++R D ++F ++
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD- 420
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y +LL C++G+ + AL + M+ + +++ VTYTT++ L K G E+
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L+ + KGV +V Y ++ G E L EM++ G P++ +YN L+
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAY 327
++ + ++ + + G + +A+TF + ++ G DK++
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSF 585
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 8/250 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI G+AG A++ F++M+ L +V+++N ++ A S+ L+ E K+
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P +Y +L+ C + +KAL LL EM+ KG Y +++N L K E
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFL 278
A L+ E+ + Y V I + G RL E +D EM+ G PD +YN L
Sbjct: 460 ANELFQELRENCGYSSARVYAVMIKHL--GKCGRLSEAVDLFNEMKKLGCNPDVYAYNAL 517
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M+ + M DEA + +EENGC+P+ + + +G A ++F K S +
Sbjct: 518 MSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKI 577
Query: 336 VHKIPDFNTV 345
+ +NTV
Sbjct: 578 KPDVVSYNTV 587
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 3/278 (1%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L +++ G+A M + A+ F Q+ + ++N+++ + ++KV L++E+
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMC 221
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + PD ++Y L+ + G D A+ L +EM+ G+ T YTT+L +K G
Sbjct: 222 NEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E+A L EM++KG L V Y I G E + M G KPD + N L
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS-GNFDKAYKVFKESVMVH 337
+ K + +A K++E +E C+PN T+ T I L S +A+ +++
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
+P T +L++G K ++++A ++ + +K F P
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP 439
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL + + + +P + Y + L K+KR+ L + + + +
Sbjct: 423 EKALLLLEEMDEKGFAPCPAAYCS--LINALGKAKRYEAANELFQELRENCGYSSARVYA 480
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ G+ G A+ F++M +LG V ++NAL+ R + D+ L + +
Sbjct: 481 VMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEEN 540
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD S+ ++L +G A+E+ M+N ++ V+Y TVL CL + G EE
Sbjct: 541 -GCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEE 599
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A +L EM KG + D+ Y+
Sbjct: 600 AAKLMKEMNSKGFEYDLITYS 620
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 173/354 (48%), Gaps = 8/354 (2%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
+G + S +++ K +L + ++A+D + + K S S A ++ + LA++
Sbjct: 198 SGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEKFGLS--KSTEAMNVLMDILARNG 255
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRS-YGQAGMFDHAMRTFDQMDELGTPRSVISF 135
R D + + + Y N++ S Y +A MF A +T ++M+E G +V+S+
Sbjct: 256 RVEDARAVALEFEGCLTLDYRSY--NILSSGYCKARMFGDARKTMEEMEERGFHPNVVSY 313
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
A + A + + V I+ +E+ +K PD I+Y + +++ + +KALE+ E++
Sbjct: 314 TAFIEAYGEQKDFRNVEIILNEMQEK-GCPPDLITYTVYIRALGKARQINKALEICEEIK 372
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPE 254
G + T Y ++++ L G ++A ++ ++EK+GV D+ Y I+ E
Sbjct: 373 RNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACALSQDE 432
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
+L+ +M + KPD +Y L+ C+ + M K + + EN S + T+ +
Sbjct: 433 SALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTYDLLV 492
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
+ L G A F+E+V+ +P T K+L+E L ++K + E KG I +
Sbjct: 493 HGLRKQGKLKYACFFFQEAVLKGMVPCDKTYKILLEEL-ERKNMAEMKGKIEKL 545
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+L+ EM V+ VT V+ L + G EA + +EK G+ A NV +
Sbjct: 192 DLVQEMSGLNGYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEKFGLSKSTEAMNVLMDIL 251
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G E + + E + L D SYN L + YCK M +A+K E +EE G PN
Sbjct: 252 ARNGRVEDARAVALEF-EGCLTLDYRSYNILSSGYCKARMFGDARKTMEEMEERGFHPNV 310
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
++ +I +F + E PD T + + L K ++I +A +
Sbjct: 311 VSYTAFIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKALEICEE 370
Query: 368 IKK 370
IK+
Sbjct: 371 IKR 373
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 155/332 (46%), Gaps = 10/332 (3%)
Query: 21 TTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSD 80
TAS +SV +L + AL+++ S+ + + + YA + L++++RF +
Sbjct: 179 ATASILSVLGNHEQLPA------ALELFESLKQDESYSLDV-YAYTSLISILSRARRFDE 231
Query: 81 IETLIESHKNDPKITQEPYLCNLIRSYGQAG-MFDHAMRTFDQMDELGTPRSVISFNALL 139
TL E+ + + + ++ YG+ G +D F +M +L ++N ++
Sbjct: 232 GITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMI 291
Query: 140 FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
AC ++ + LF E+ K+ P++++Y LL + G +A ELL EME G+
Sbjct: 292 TACIQNSHCQEALRLFQEM-KEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGI 350
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKE 258
VTY ++ + G +EA L + KG+ D Y I+ + E+ E
Sbjct: 351 SPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALE 410
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
EMR P+ ++YN L+ Y + E +D+ KV++ ++E C+P+ T+ + +
Sbjct: 411 TFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFG 470
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
G + VF+E +P +T +L+E
Sbjct: 471 NCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 502
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 6/338 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY-LC 101
KAL+++ + KH + A + L ++ L ES K D + + Y
Sbjct: 159 KALEVFEWIRKHDCFKLRG-VATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYT 217
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPK 160
+LI +A FD + F+ M G + +++N +L R +D++ LF E+ K
Sbjct: 218 SLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM-K 276
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SPD +Y ++ + + +AL L EM+ G VTY +L+ K G +
Sbjct: 277 DLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHK 336
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA L EME G+ ++ YN I G + L + GL PD +Y L+
Sbjct: 337 EASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLI 396
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+ + + E ++A + + + + C+PN T+ I D KVFK +
Sbjct: 397 SAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCT 456
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
PD T L++ + E V R +K+ + P V
Sbjct: 457 PDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGV 494
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 128/260 (49%), Gaps = 5/260 (1%)
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSS-DKALEL 190
V ++ +L+ +R+R +D+ LF+ + ++ + ++Y ++L + G S D+ L
Sbjct: 213 VYAYTSLISILSRARRFDEGITLFETMQRE-GQRGNAVTYNVMLDLYGKRGDSWDRIQSL 271
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
EM++ + TY T++ + + +EA RL+ EM++ G + YN + + YG
Sbjct: 272 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNA-LLDVYG 330
Query: 251 --GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNAT 308
G + EL+ EM AG+ P+ ++YN L+ Y + + DEA + + L G P+
Sbjct: 331 KGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEF 390
Query: 309 TFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T+ T I + ++KA + F E + P+ T +L++ + +K+ + V + +
Sbjct: 391 TYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFM 450
Query: 369 KKKFPPNVLRAWKKVEEELG 388
++K L W + + G
Sbjct: 451 QEKNCTPDLVTWNSLLKSFG 470
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 3/265 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI YG+ G D+++ + + G +V +F AL+ + R + + + E+ +
Sbjct: 500 LIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEA- 558
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVE-VTTVTYTTVLNCLYKQGNAEE 221
L + L+ S+ +SG + + ++E+E + ++ + T + K G E
Sbjct: 559 GLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNE 618
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ +++ G D+ +N I+ G ER +L++E+R A LKPD ++YN LM+
Sbjct: 619 AQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMS 678
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y + M +A++V + G +PN T+ T +Y G D A +VF + V P
Sbjct: 679 MYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRP 738
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVI 365
D T LV KEA VI
Sbjct: 739 DNFTFNTLVGSYSSLGLYKEALSVI 763
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 4/232 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ YG+ GM A +M+ G +++++N L+ A R+ L D+ L + K
Sbjct: 325 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSK- 383
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD+ +Y L+ + + +KALE EM VTY +++ + ++
Sbjct: 384 GLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDM 443
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+++ M++K D+ +N + ++G G + + EM+ AG P ++N L+
Sbjct: 444 MKVFKFMQEKNCTPDLVTWN-SLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 502
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
CY + +D + +Y+GL G P TF + L G + + KV +E
Sbjct: 503 CYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 554
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 136/291 (46%), Gaps = 14/291 (4%)
Query: 81 IETLIESHKNDPKITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL 139
I++L + K D +I+ + Y N +I + Q A+R F +M E G + +++NALL
Sbjct: 268 IQSLFQEMK-DLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALL 326
Query: 140 FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGV 199
+ ++ + L E+ + +SP+ ++Y L+ ++ +G D+A L + +KG+
Sbjct: 327 DVYGKGGMHKEASELLVEM-EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGL 385
Query: 200 EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKEL 259
TY T+++ + E+A ++EM K ++ YN+ I + YG R+++L
Sbjct: 386 CPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILI-DIYG----RMEKL 440
Query: 260 IDEMR------DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
D M+ + PD +++N L+ + M+ E V+ ++ G P TF
Sbjct: 441 DDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNIL 500
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
I G D + ++K + P T L+ L ++ + ++ + V
Sbjct: 501 IECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKV 551
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 131/279 (46%), Gaps = 6/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI YG+ D M+ F M E ++++N+LL + + +V +F E+ K+
Sbjct: 430 LIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREM-KRA 488
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P ++ +L++ + G D ++++ + G++ T T+ ++ L ++G ++
Sbjct: 489 GYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQC 548
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKP-DTISYNFLM 279
E++ EM + G+ L A + + ++Y G +L++ IDE+ + +P I +
Sbjct: 549 EKVSQEMAEAGLQLSDACH-AGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFV 607
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
YCK M +EA+ L +NG SP+ F I G ++A K+ +E
Sbjct: 608 LAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLK 667
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF-PPNVL 377
PD T L+ ++ +A+ V+ +++ PN++
Sbjct: 668 PDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLI 706
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 3/256 (1%)
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
P L+ S + G + + +M E G S L+ + S + ++ DE
Sbjct: 530 PTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDE 589
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K I + ++C G ++A LN++ + G + +++ K+G
Sbjct: 590 LEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRG 649
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISY 275
E A +L E+ K + D YN + + YG G + +E++ EMR AG P+ I+Y
Sbjct: 650 WIERAVKLLEEIRKAQLKPDGVTYNC-LMSMYGREGMYYKAEEVMSEMRRAGKAPNLITY 708
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N L+ Y K+ MD+A +V+ + P+ TF T + G + +A V +
Sbjct: 709 NTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTE 768
Query: 336 VHKIPDFNTVKLLVEG 351
P T K L++G
Sbjct: 769 HGCQPTQITFKALLDG 784
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 149/315 (47%), Gaps = 15/315 (4%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ RL + F D E + + H P Y C L + + G D A + ++M++ G
Sbjct: 216 IGRLQDAIVFVD-ERMRQVHGCAPNTVT--YNC-LADACCRVGDIDMACQIVERMEKEGV 271
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+VI+ N ++ C R+ + ++ + ++Y L+ + + A
Sbjct: 272 TPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALA 331
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
+EL +EM ++G V Y T+++ L + G +A + + M+K G LD AYN+ I
Sbjct: 332 MELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILI-- 389
Query: 248 TYGG--DPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
GG +RL E L +EM+ AGL+PD +YN L++C CK ++ + ++G
Sbjct: 390 --GGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDG 447
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
C P+ TF T ++ C +G D+A K+F+ P+ L++ L K +++ A
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507
Query: 363 GVIRTIKK-KFPPNV 376
+ +++ P NV
Sbjct: 508 KLFDEMRENNVPANV 522
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 158/390 (40%), Gaps = 48/390 (12%)
Query: 33 SKLRSEFD--PDKALDIYSSVSKHYASPVSSRYAQDLT-VRRLAKSKRFSDIETLIESHK 89
SKL + F D A + S++ +P S + L+ + R + +++ T +
Sbjct: 102 SKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREAS 161
Query: 90 NDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTP--RSVISFNALLFA-CTRSR 146
P I L N + +AG+ A++ D+M G+ ++ N ++ C R
Sbjct: 162 VKPDIVTYGILLNRL---CKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGR 218
Query: 147 LYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTY 206
L D + + + + + + +P+ ++Y L + C G D A +++ ME +GV +T
Sbjct: 219 LQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITM 278
Query: 207 TTVLNCLYKQG-------------------------------------NAEEAERLWSEM 229
T++ L + G N A L+ EM
Sbjct: 279 NTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEM 338
Query: 230 EKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+G D Y I+ T G + M+ AG K D +YN L+ +C+ + +
Sbjct: 339 ADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRL 398
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
EA +++E ++ G P+ T+ T + LC +G+F ++ + P T L
Sbjct: 399 HEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTL 458
Query: 349 VEGLVKKKKIKEAKGVIRTI-KKKFPPNVL 377
V G K K EA + R++ + + PN +
Sbjct: 459 VHGYCKAGKTDEALKIFRSMGEARIQPNTV 488
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 114/252 (45%), Gaps = 4/252 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRS-RLYDKVPILFDEIPKK 161
L+ ++ AM F +M + G P + + ++ T++ RL D I KK
Sbjct: 318 LVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASM--KK 375
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
D+ +Y +L+ C +A +L EM+ G++ TY T+L+CL K G+
Sbjct: 376 AGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSA 435
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ L M G V + + G + ++ M +A ++P+T+ YN L+
Sbjct: 436 VDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLID 495
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK+ +D A K+++ + EN N TT+ + L +KA+++ + P
Sbjct: 496 FLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTP 555
Query: 341 DFNTVKLLVEGL 352
D+ T+ +L+E L
Sbjct: 556 DYVTMDVLMEWL 567
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + L K+ FS ++ L+ + +D L+ Y +AG D A++ F
Sbjct: 418 YTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRS 477
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M E + + +N L+ +SR D LFDE+ ++ N+ + +Y LLK D
Sbjct: 478 MGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEM-RENNVPANVTTYNALLKGLQDKN 536
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+KA EL+++M+ + VT ++ L + G E ERL ME++
Sbjct: 537 MPEKAFELMDQMKEERCTPDYVTMDVLMEWLPEIG---ETERLKCFMEQR 583
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 9/264 (3%)
Query: 114 DHAMRTFDQMDE-LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
DHA+R F + G + + FN+LL A +SR K L + +++ PD ++Y
Sbjct: 157 DHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERRF--PPDAVTYN 214
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L C + +AL++L +M G+ T TY +L ++ G + A + +M+K+
Sbjct: 215 TLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKR 274
Query: 233 GVD-----LDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNE 286
G + DV +Y + G ++ +++ DEM G P +YN L+ CK
Sbjct: 275 GSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKG 334
Query: 287 MMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVK 346
+++A V++ + G PN T+ I LC +G D+A K+ + P+ T
Sbjct: 335 NVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYN 394
Query: 347 LLVEGLVKKKKIKEAKGVIRTIKK 370
+L+ L ++ I++A + T+ K
Sbjct: 395 VLIGYLFEEGDIEKALHLFETMSK 418
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKK 161
++ G AG D A + FD+M G S+ ++NAL+ C + + D V + D I K
Sbjct: 291 VLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKG 350
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y P+ ++Y +L++ C +G D+A++LL++M+ +G E TY ++ L+++G+ E+
Sbjct: 351 Y--IPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEK 408
Query: 222 AERLWSEMEKKGVDL-DVAAYNVRITNTY----GGDPERLKELIDEMRDAGLKPDTISYN 276
A L+ M K L + YN+ I+ + D ++ EM D G P +N
Sbjct: 409 ALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFN 468
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 5/193 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKA ++ +S+ +P + Y + ++ K D + + I
Sbjct: 302 DKARKVFDEMSREGCTPSIATY--NALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYT 359
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LIR AG D AM+ D+M G +V ++N L+ +K LF+ + K
Sbjct: 360 VLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKG 419
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDK---ALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
P++ +Y +++ + ++ A ++ EM ++G + VLN L GN
Sbjct: 420 EECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLTGN 479
Query: 219 AEEAERLWSEMEK 231
E + L EK
Sbjct: 480 QELSRELLRMQEK 492
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 161/341 (47%), Gaps = 10/341 (2%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQ-DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYL- 100
+AL+ Y+ V +S +L ++ + K D ++ ++ P +P +
Sbjct: 149 RALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDA---VQMFRDMPVSKCQPDVY 205
Query: 101 --CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
C L+ +A D A+ D+M G S ++FN L+ + +V L D +
Sbjct: 206 TYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNM 265
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K +P++++Y L+ C G +KA+ LL+ M + VTY T++N L KQG
Sbjct: 266 FLK-GCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGR 324
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNF 277
A + R+ + ME++G ++ Y+ I+ + G + +L EM + +TI Y+
Sbjct: 325 ALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSA 384
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ C++ DEA +V + N C PNA T+ + + +GN KA +++K+ +
Sbjct: 385 VIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHN 444
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
+ +L+ GL K K+KEA V + + K P+V+
Sbjct: 445 FTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVV 485
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 20/327 (6%)
Query: 78 FSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMD-ELGTPRSVISFN 136
F +E +++ + + ++ E + ++YG+A + + A+ FD+M E R+V SFN
Sbjct: 76 FKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFN 135
Query: 137 ALLFACTRSRLYDKVPILFDEI--PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
++L + L+ + ++ + K N+SP+ +++ L++K+ C G D A+++ +M
Sbjct: 136 SVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDM 195
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDP 253
+ TY T+++ L K +EA L EM+ G +NV I GD
Sbjct: 196 PVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDL 255
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
R+ +L+D M G P+ ++YN L+ C +++A + + + + C PN T+ T
Sbjct: 256 ARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTI 315
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFN--TVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I L G +V ++M + N L+ GL K+ K +EA + + + K
Sbjct: 316 INGLVKQGRALDGARVL--ALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVK 373
Query: 372 FPPNVLRAWKKVEEELGLVPAPAVGDG 398
E EL + AV DG
Sbjct: 374 ------------ECELNTIVYSAVIDG 388
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 18/288 (6%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G AM+ F +M + I ++A++ R D+ + E+
Sbjct: 350 LISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN- 408
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +Y L+K ++G+ KA+E+ +M V Y+ +++ L K G +EA
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEM--RDAGLKPDTISYNFLM 279
+W++M KG DV AY I + G E +L +EM ++ +PD ++YN L+
Sbjct: 469 MMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILL 528
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK + A + + + GC P+ T ++ L + + + F + ++V
Sbjct: 529 NALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVR-- 586
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPNVLRAWKKVEEEL 387
L+K++++ A ++ + +K P W +V E+L
Sbjct: 587 ------------LLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDL 622
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 119/250 (47%), Gaps = 8/250 (3%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI G+AG A++ F++M+ L +V+++N ++ A S+ L+ E K+
Sbjct: 340 NLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKE 399
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ P +Y +L+ C + +KAL LL EM+ KG Y +++N L K E
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELID---EMRDAGLKPDTISYNFL 278
A L+ E+ + Y V I + G RL E +D EM+ G PD +YN L
Sbjct: 460 ANELFQELRENCGYSSARVYAVMIKHL--GKCGRLSEAVDLFNEMKKLGCNPDVYAYNAL 517
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF---KESVM 335
M+ + M DEA + +EENGC+P+ + + +G A ++F K S +
Sbjct: 518 MSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKI 577
Query: 336 VHKIPDFNTV 345
+ +NTV
Sbjct: 578 KPDVVSYNTV 587
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 134/278 (48%), Gaps = 3/278 (1%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
L +++ G+A M + A+ F Q+ + ++N+++ + ++KV L++E+
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMC 221
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + PD ++Y L+ + G D A+ L +EM+ G+ T YTT+L +K G
Sbjct: 222 NEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E+A L EM++KG L V Y I G E + M G KPD + N L
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGS-GNFDKAYKVFKESVMVH 337
+ K + +A K++E +E C+PN T+ T I L S +A+ +++
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPP 374
+P T +L++G K ++++A ++ + +K F P
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP 439
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 107/214 (50%), Gaps = 4/214 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + + + A+ ++MDE G ++ +L+ A +++ Y+ LF E+ +
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENC 471
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
S ++ Y +++K G +A++L NEM+ G Y +++ + + G +EA
Sbjct: 472 GYSSARV-YAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEA 530
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L ME+ G D+ ++N+ I N + G P+ E+ M+++ +KPD +SYN ++
Sbjct: 531 HSLLRTMEENGCTPDLNSHNI-ILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLG 589
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
C + M +EA K+ + + G + T+ + +
Sbjct: 590 CLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSIL 623
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
+KAL + + + +P + Y + L K+KR+ L + + + +
Sbjct: 423 EKALLLLEEMDEKGFAPCPAAYCS--LINALGKAKRYEAANELFQELRENCGYSSARVYA 480
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I+ G+ G A+ F++M +LG V ++NAL+ R + D+ L + +
Sbjct: 481 VMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEEN 540
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+PD S+ ++L +G A+E+ M+N ++ V+Y TVL CL + G EE
Sbjct: 541 -GCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEE 599
Query: 222 AERLWSEMEKKGVDLDVAAYN 242
A +L EM KG + D+ Y+
Sbjct: 600 AAKLMKEMNSKGFEYDLITYS 620
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 3/266 (1%)
Query: 107 YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSP 166
Y + G + A+ +M E G +V ++ L+ ++ ++ +F + K+ P
Sbjct: 275 YFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKE-GCKP 333
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK-QGNAEEAERL 225
D + L+ +G A++L EME+ VTY TV+ L++ + A EA
Sbjct: 334 DVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLW 393
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ +M++ GV Y++ I + E+ L++EM + G P +Y L+ K
Sbjct: 394 YEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGK 453
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ + A ++++ L EN +A + I HL G +A +F E + PD
Sbjct: 454 AKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYA 513
Query: 345 VKLLVEGLVKKKKIKEAKGVIRTIKK 370
L+ G+V+ EA ++RT+++
Sbjct: 514 YNALMSGMVRVGMTDEAHSLLRTMEE 539
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G D T+++M + +V+++N+++ A +++ DK + + K
Sbjct: 18 VINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS- 76
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD ++Y ++ C SG +A+ L +M + GVE VTY ++++ L K G EA
Sbjct: 77 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 136
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ M K+G+ D+ Y + G + L+D M G+ P+ ++ L+
Sbjct: 137 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 196
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y K E ++EA V+ + + G +PNA T+ T I LC SG + A F++ + PD
Sbjct: 197 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 256
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
L+ L K ++A+
Sbjct: 257 SIVYNSLIHSLCIFDKWEKAE 277
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD +SY ++ G DK NEM +K + VTY +++ L K ++A +
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 226 WSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
+ M K GV D YN I + + G P+ + +MR G++PD ++YN LM C
Sbjct: 70 LTTMVKSGVMPDCMTYN-SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 128
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
KN EA+K+++ + + G P+ TT+ T + G + + + V P+
Sbjct: 129 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 188
Query: 344 TVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
+LV K++K++EA V ++++ PN +
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAV 223
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 146/333 (43%), Gaps = 12/333 (3%)
Query: 18 GSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKS-- 75
G +S S + E D DK Y+ + SP Y + A++
Sbjct: 5 GGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVD 64
Query: 76 KRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISF 135
K + T+++S +T +++ + +G A+ +M G V+++
Sbjct: 65 KAMEVLTTMVKSGVMPDCMTYN----SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 120
Query: 136 NALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
N+L+ + C R + I FD + K+ L PD +YG LL+ + G+ + LL+ M
Sbjct: 121 NSLMDYLCKNGRCTEARKI-FDSMTKR-GLKPDITTYGTLLQGYATKGALVEMHGLLDLM 178
Query: 195 ENKGVEVTTVTYTTVLNCLY-KQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGD 252
G+ ++ +L C Y KQ EEA ++S+M ++G++ + Y I G
Sbjct: 179 VRNGIHPNHYVFS-ILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGR 237
Query: 253 PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRT 312
E ++M D GL+PD+I YN L+ C + ++A++++ + + G + F +
Sbjct: 238 VEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNS 297
Query: 313 WIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTV 345
I C G ++ K+F V + PD T+
Sbjct: 298 IIDSHCKEGRVIESVKLFDLMVRIGVKPDIITL 330
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 4/258 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+R + Q G A FD+M G I++ + + K + +E+ K
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM-KAE 481
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD I+Y +L+ C G+ D A EL+ +M +G+ VTYT++++ G +A
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E ++S+M KKG+ V Y V I ++Y G + K+ DEM+D G+ P+ I+YN L+
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLI-HSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIY 600
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK MMD A ++ +E G SPN T+ I + A K++K+ + P
Sbjct: 601 GLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKP 660
Query: 341 DFNTVKLLVEGLVKKKKI 358
D T L++ L K K+
Sbjct: 661 DSCTHSALMKHLSKDYKL 678
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 144/306 (47%), Gaps = 3/306 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L + R SD ++ N+ + LI Y + G F A+ F ++ S
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
V+++N L+ R+ D + D++ K + L PD +++ +L++ C G+ A EL
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIK-HGLCPDVVTFTILVRGFCQMGNLPMAKELF 440
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
+EM ++G++ + YTT + K GN +A + EM+ +G D+ YNV I
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
G+ + EL+ +MR G+ PD ++Y ++ + + ++ +A++V+ + + G P+ T+
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY 560
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
I+ G D A K F E P+ T L+ GL K+ + A + ++
Sbjct: 561 TVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMES 620
Query: 371 K-FPPN 375
K PN
Sbjct: 621 KGVSPN 626
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
L PD + +LK D ++ E+ + M + T VT+ T+++ K+G A
Sbjct: 168 LLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAV 227
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+ M G D + +YNV + G G+ +R KELI++M GLK +YN L+ +
Sbjct: 228 EVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGF 287
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
CK EM +EA + + G P T+ T +Y LC G A + V +PD
Sbjct: 288 CKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDL 347
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ L+ G + EA + ++ K
Sbjct: 348 VSYNTLIYGYSRLGNFAEALLLFSELRSK 376
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 124/277 (44%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ + + + + + F +M G V + N +L + ++V ++ + K
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYS-VMIKC 201
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +++ ++ S C G +A+E+L+ M G + V+Y ++N L +G + A
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L +M G+ + YN I + E +L EM G P ++YN +M
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C+ + +A++ + + P+ ++ T IY GNF +A +F E + +P
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L++G + + AKG+ IK P+V+
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVV 418
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
+P KA + + P Y ++ + L K F D L++ + + +
Sbjct: 467 NPSKAFGMKEEMKAEGFPPDLITY--NVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEI 158
++I ++ +G+ A F M + G SV+++ L+ + R RL D FDE+
Sbjct: 525 YTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRL-DFAKKYFDEM 583
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K +SP+ I+Y L+ C D A L EME+KGV TYT ++N
Sbjct: 584 QDK-GVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQY 642
Query: 219 AEEAERLWSEMEKKGVDLD 237
++A +L+ +M + + D
Sbjct: 643 WQDALKLYKDMLDREIKPD 661
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL A R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C M EA+ + + + + +P + + F I C SGN D A V K + +
Sbjct: 265 LCNAGKMIEARSILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGVLIENFCKAGQYDQA 345
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKA 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKY 285
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 49/256 (19%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI+ Y D A+R ++M G + I+++ LL C ++ + IL E+ K
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSIL-KEMMDK 284
Query: 162 YNLSPDKIS------------------------------------YGLLLKSHCDSGSSD 185
Y L+P S YG+L+++ C +G D
Sbjct: 285 Y-LAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYD 343
Query: 186 KALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD 237
+A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 344 QAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQLLKLGVQ-D 402
Query: 238 VAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYE 296
A N I ++ G P+ EL+ M + + +Y+ L+ Y K +AK +
Sbjct: 403 PTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALD 462
Query: 297 GLEENGCSPNATTFRT 312
+ EN P+++ FR+
Sbjct: 463 SMIENDHLPDSSLFRS 478
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 2/260 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G + + +M + G ++N L+ R D+ L++E K
Sbjct: 532 LISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC-KSR 590
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+L P+ +YG+++ +C + ++ +L E+ + +E+ +V Y T++ + GN EA
Sbjct: 591 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEA 650
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+L +M KG+ A Y+ I G E K LIDEMR GL P+ + Y L+
Sbjct: 651 FKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGG 710
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK MD+ V + + PN T+ I SG+ A K+ E V +PD
Sbjct: 711 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770
Query: 342 FNTVKLLVEGLVKKKKIKEA 361
T +L G K+ KI+E
Sbjct: 771 TVTYNVLTNGFCKEGKIEEG 790
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R +M E G I++N L+ C + ++ L E+ K+
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ- 555
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y LL+ C G D+A+ L NE +++ + TY +++ K EE
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 223 ERLWSEMEKKGVDLDVAAYN--VRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
E+L++E+ + ++L+ YN +R G E K L D+MR G+ P T +Y+ L+
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFK-LHDDMRSKGIPPTTATYSSLIH 674
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C M++AK + + + + G PN + I C G DK V +E P
Sbjct: 675 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHP 734
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ T ++++G K +K A ++ + K
Sbjct: 735 NKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 139/314 (44%), Gaps = 43/314 (13%)
Query: 101 CNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
C R+ G F +A+ F + G +V + LL + ++ +K +F+ +
Sbjct: 185 CTQFRNVG----FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-- 238
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+ +SPD + + + C G + A++L +ME GV VTY +++ L K GN +
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY------------------GGDPERL--KELI 260
EA R +M K GV+ + Y+V I G P + LI
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358
Query: 261 D----------------EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCS 304
D +M G+ P++++ N ++ +CK M++A+ + E + G S
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418
Query: 305 PNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGV 364
N F T I+ LC + F+ A + +E ++ + P+ + LV GL K+ K +A +
Sbjct: 419 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478
Query: 365 -IRTIKKKFPPNVL 377
R ++K F N++
Sbjct: 479 WFRLLEKGFGANLV 492
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 135/312 (43%), Gaps = 38/312 (12%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
NLI + G D A R ++M + G ++I+++ L+ + +++ + E +K
Sbjct: 286 NLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEK 345
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+P+++ Y L+ +C G+ AL + +M +KG+ +VT +++ K G E+
Sbjct: 346 -GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 404
Query: 222 AERLWSEMEKKGVDLDVAAY--------------------------NVR-----ITNTYG 250
AE + EM +G ++ A+ N+R +T G
Sbjct: 405 AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVG 464
Query: 251 GDPERLK-----ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + K EL + + G + ++ N L+ CK M EA ++ + + E G
Sbjct: 465 GLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVL 524
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ T+ T I C G ++ +K+ E V PD T LL+ G+ + K+ EA +
Sbjct: 525 DKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLW 584
Query: 366 RTIKKK-FPPNV 376
K + PNV
Sbjct: 585 NECKSRDLVPNV 596
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 134/296 (45%), Gaps = 4/296 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L K ++F++ ++++ E LI Y + G A+R M G
Sbjct: 323 INGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGI 382
Query: 129 PRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ ++ N+++ C ++ IL + + + ++++P ++ ++ C + + A
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLCMNSRFESA 440
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN 247
L L EM + + TT++ L K+G +A LW + +KG ++ N I
Sbjct: 441 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 500
Query: 248 TY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G+ + L+ +M + G D I+YN L++ CK ++E K+ + + G P+
Sbjct: 501 LCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD 560
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
T+ I+ +C G D+A ++ E +P+ T ++++G K KI+E +
Sbjct: 561 TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 113/228 (49%), Gaps = 2/228 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G D A+ +++ +V ++ ++ ++ ++ LF E+ +
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ- 625
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL + + Y L++++C +G++ +A +L ++M +KG+ TT TY+++++ + G E+A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L EM K+G+ +V Y I G +++ ++ EM + P+ I+Y ++
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
Y K+ M A K+ + G P+ T+ C G ++ +K+
Sbjct: 746 YSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 146 RLYD-KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTV 204
RL D K+P+LF + PK H + S A+ LNE+ GV V V
Sbjct: 137 RLIDRKLPVLFGD-PKN---------------RHIEIAS---AMADLNEVGESGVAVAAV 177
Query: 205 TYTTVLNCL-YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEM 263
+ C ++ A ++ + KGV V +++ + + E
Sbjct: 178 DLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFET 237
Query: 264 RDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNF 323
G+ PD ++ + +CK +++A +++ +E+ G SPN T+ I+ LC GN
Sbjct: 238 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297
Query: 324 DKAYKVFKESVMVHKI-PDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPN 375
D+A++ FKE ++ + T +L+ GL+K +K EA V++ T++K F PN
Sbjct: 298 DEAFR-FKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPN 350
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G + A D+M + G +V+ + AL+ + DKV + E+
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM-SS 729
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y++ P+KI+Y +++ + SG A +LL+EM KG+ TVTY + N K+G EE
Sbjct: 730 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE 789
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI 245
++ M ++G+ LD Y +
Sbjct: 790 GFKICDYMSQEGLPLDEITYTTLV 813
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 135/301 (44%), Gaps = 37/301 (12%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L ++K+F I L++ D LI SYG+A + AM F+QM E G
Sbjct: 371 VGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC 430
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
PD+++Y L+ H +G D A+
Sbjct: 431 ------------------------------------KPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
++ M+ G+ T TY+ ++NCL K G+ A +L+ EM +G ++ YN+ + +
Sbjct: 455 DMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ + +L +M++AG +PD ++Y+ +M ++EA+ V+ +++ P+
Sbjct: 515 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
+ + +GN +KA++ ++ + +P+ T L+ ++ KI EA +++
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 368 I 368
+
Sbjct: 635 M 635
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI-TN 247
+LL+EM G + TVTY +++ + EA ++++M++ G D Y I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G + ++ M+ GL PDT +Y+ ++ C K + A K++ + + GC+PN
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T+ + + N+ A K++++ PD T +++E L ++EA+ V
Sbjct: 505 VTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 368 IKKK-FPP----------------NVLRAWKKVEEEL--GLVP 391
+++K + P NV +AW+ + L GL+P
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLP 607
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 7/188 (3%)
Query: 205 TYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LID 261
TYTT++ L + +L EM + G + YN R+ ++Y G L E + +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN-RLIHSY-GRANYLNEAMNVFN 423
Query: 262 EMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSG 321
+M++AG KPD ++Y L+ + K +D A +Y+ ++ G SP+ T+ I L +G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 322 NFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVLRAW 380
+ A+K+F E V P+ T ++++ K + + A + R ++ F P+ + +
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKV-TY 542
Query: 381 KKVEEELG 388
V E LG
Sbjct: 543 SIVMEVLG 550
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 41/325 (12%)
Query: 93 KITQEP---YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD 149
K+ EP L +L+ + A+ DQM E+G ++F L+
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
+ L D + ++ PD ++YG ++ C G +D AL LLN+ME +E V Y+TV
Sbjct: 201 EAVALIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT--NTYG--GDPERL--------- 256
++ L K + ++A L++EME KGV +V Y+ I+ YG D RL
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 257 -----------------------KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
++L +EM + P+ +Y+ L+ +C + + EAK+
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ E + C PN T+ T I C + DK ++F+E + + T L+ G
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 354 KKKKIKEAKGVIR-TIKKKFPPNVL 377
+ + A+ V + + PN+L
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNIL 464
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 133/260 (51%), Gaps = 6/260 (2%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ ++M+ +V+ ++ ++ + + R D LF E+ K + P+ I+Y
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSS 293
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ C+ G A LL++M + + VT++ +++ K+G +AE+L+ EM K+
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 234 VDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
+D ++ Y+ I D RL K++++ M P+ ++YN L+ +CK + +D+
Sbjct: 354 IDPNIFTYSSLINGFCMLD--RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
+++ + + G N T+ T I+ + + D A VFK+ V V P+ T +L++
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 351 GLVKKKKIKEAKGVIRTIKK 370
GL K K+ +A V +++
Sbjct: 472 GLCKNGKLAKAMVVFEYLQR 491
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + FD + ++M+ LG ++ ++N L+ R L ++ K
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKM-MKL 142
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD ++ LL C A+ L+++M G + TVT+TT+++ L+ A EA
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L M ++G D+ Y + GD + L+++M A ++ + + Y+ ++
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK D+A ++ +E G PN T+ + I LC G + A ++ + + P+
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T L++ VKK K+ +A+ + IK+ PN+
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 4/248 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
D A+ F +M+ G +VI++++L+ C R D +L D I +K N P+ +++
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN--PNLVTFS 327
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
L+ + G KA +L EM + ++ TY++++N EA+++ M +K
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRK 387
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
+V YN I ++ EL EM GL +T++Y L+ + + D A
Sbjct: 388 DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 447
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ V++ + G PN T+ + LC +G KA VF+ PD T +++EG
Sbjct: 448 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Query: 352 LVKKKKIK 359
+ K K K
Sbjct: 508 MCKAGKWK 515
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 1/168 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P I + LL + D + +ME G+ TY ++NC + A L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 226 WSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+M K G + D+ N + +G L+D+M + G KPDT+++ L+
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+ EA + + + + GC P+ T+ + LC G+ D A + +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK 243
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 3/173 (1%)
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
D A+ L M + + ++ +L+ + K + +ME G+ ++ YN+
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 245 ITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG 302
I N + L+ +M G +PD ++ N L+ +C + +A + + + E G
Sbjct: 120 I-NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 303 CSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKK 355
P+ TF T I+ L +A + V PD T +V GL K+
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 139/276 (50%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+++ Y + G D+A +M+E G ++FN L+ C RL + ++ DE+ +K
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM-DEMSRK 451
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L + ++ +L + C D A +LL+ +G V V+Y T++ +K G + E
Sbjct: 452 -GLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVE 510
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +LW EM++K + + YN I + G ++ + ++E+ ++GL PD +YN ++
Sbjct: 511 AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIIL 570
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YC+ +++A + + + + P+ T + LC G DKA K+F + K
Sbjct: 571 GYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAI 630
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI-KKKFPPN 375
D T ++ GL K+ + +EA ++ + +KK P+
Sbjct: 631 DAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPD 666
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 10/244 (4%)
Query: 133 ISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+S+N +L C + +L + +L D K L P++ ++ +L+ +C G +A +++
Sbjct: 248 VSYNTILDVLCKKGKLNEARDLLLD--MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI 305
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG 251
+ M V TY ++ L K G +EA RL EME + DV YN I +
Sbjct: 306 DLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDC 365
Query: 252 DPERLK--ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
LK ELID+M G+KP+ ++YN ++ Y K MD A +EE+G SP+ T
Sbjct: 366 SSS-LKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 424
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL--LVEGLVKKKKIKEAKGVIRT 367
F T I C +G +A+++ E M K N+V L ++ L ++K+ +A ++ +
Sbjct: 425 FNTLINGYCKAGRLSEAFRMMDE--MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSS 482
Query: 368 IKKK 371
K+
Sbjct: 483 ASKR 486
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y +AG A R D+M G + ++ N +L C +L D +L +
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y + D++SYG L+ + G S +A++L +EM+ K + + +TY T++ L G ++
Sbjct: 488 YFV--DEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQ 545
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ +E+ + G+ D YN I G E+ + ++M KPD + N L+
Sbjct: 546 SIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C M+D+A K++ G + +A T+ T I LC F++A+ + E P
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D T ++ L ++KEA+ + I
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRI 693
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 134/317 (42%), Gaps = 33/317 (10%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
+ L ++ D L+ S E LI Y + G AM+ +D+M E
Sbjct: 464 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEI 523
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
S+I++N ++ S D+ +E+ + L PD+ +Y ++ +C G +KA
Sbjct: 524 IPSIITYNTMIGGLCHSGKTDQSIDKLNELLES-GLVPDETTYNTIILGYCREGQVEKAF 582
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+ N+M K + T +L L +G ++A +L++ KG +D YN I+
Sbjct: 583 QFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Query: 249 YGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG----- 302
D E +L+ EM + L PD +YN +++ M EA++ + E G
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQ 702
Query: 303 ------------------CSPNATTFRTWIYHLCGSGNFDKAYKVFKES----VMVHKIP 340
PN+ TF I LC G + A + +ES + +HK
Sbjct: 703 TISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHK-- 760
Query: 341 DFNTVKLLVEGLVKKKK 357
+T L+EGL+K++K
Sbjct: 761 --STYISLMEGLIKRRK 775
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYK---QGNAEEAERLWSEMEKKGVDLDVAAYNV 243
A ++ N M+ ++ +T T++N L + + + ++ ++S++ K GV ++ +N+
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217
Query: 244 RITNTYGGDPE-RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
I YG E +L E LI +M+D PD +SYN ++ CK ++EA+ + ++
Sbjct: 218 LI---YGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMK 274
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
NG PN TF + C G +A +V + +PD T +L+ GL K KI
Sbjct: 275 NNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKID 334
Query: 360 EA 361
EA
Sbjct: 335 EA 336
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 41/335 (12%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL--GTP 129
L ++K S I+ L + P+ L LIR ++G+ D A F P
Sbjct: 54 LIRAKMISQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAFSQFQSFRSQVPANP 113
Query: 130 RSVISFNALLFACTRSRLYDKVPILFDEI------PKKYNLS------------------ 165
V +N +L + R D L+ ++ P+ Y L+
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 166 ----------PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
P++ S+G+L++ +C +G S +ALELL+ M + GV+ V Y T+++ +
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMR---DAGL-KP 270
+G EEAERL M + G+ DV +N RI+ G + +M+ + GL +P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293
Query: 271 DTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVF 330
+ ++N ++ +CK M++EAK + E ++ NG ++ W+ L +G +A
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
KE V P+ + +++GL K I +A+ ++
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 34/340 (10%)
Query: 66 DLTVRRLAKSKRFSDIETLIESHKNDPKITQ----EPYLCNLIRSYGQAGMFDHAMRTFD 121
+L + K + +TL+ES K + + + +L L+R+ G A
Sbjct: 299 NLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRN----GKLLEAQLALK 354
Query: 122 QMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDS 181
+M + G ++ SFN ++ ++ L ++ + + PD ++Y LL C +
Sbjct: 355 EMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISS-GIGPDTVTYSTLLHGCCST 413
Query: 182 GSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAY 241
G KA +L+EM +G T T +L+ L+K+G EAE+L +M ++ DLD
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473
Query: 242 NVRITN-TYGGDPERLKELIDEMRDAG-----------------------LKPDTISYNF 277
N+ I G + E+++ M G PD I+Y+
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSI 533
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
++ CK +DEA+K + + P++ + T+I+ C G A++V K+
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
T L+ GL K +I E G++ +K+K PN+
Sbjct: 594 CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNI 633
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 147/314 (46%), Gaps = 6/314 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y +L + L S RF D + + E L+R Y +AG+ A+ D
Sbjct: 152 YTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDG 211
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G + + +N L+ + R ++ L + + ++ L PD +++ + + C +G
Sbjct: 212 MGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERM-REDGLFPDVVTFNSRISALCSAG 270
Query: 183 SSDKALELLNEM---ENKGVEVTTVT-YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
+A + +M E G+ +T + +L K+G EEA+ L M++ G +++
Sbjct: 271 KILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMEL 330
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+YN+ + G + + EM D G++P+ S+N +M CKN ++ +A+ +
Sbjct: 331 ESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGL 390
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ +G P+ T+ T ++ C +G KA + E + P+ T +L+ L K+ +
Sbjct: 391 MISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGR 450
Query: 358 IKEAKGVIRTIKKK 371
I EA+ +++ + ++
Sbjct: 451 IFEAEKLLQKMNER 464
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 147/323 (45%), Gaps = 26/323 (8%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
KA +I + + SP + Y ++ + L K R + E L++ N+ + CN
Sbjct: 418 KANNILHEMMRRGCSP--NTYTCNILLHSLWKEGRIFEAEKLLQKM-NERSYDLDNVTCN 474
Query: 103 L-IRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+ I ++G D A+ + M G+ L + L D
Sbjct: 475 IVIDGLCKSGKLDEAVEIVEGMWIHGSA-------------ALGNLGNSFIGLVDSSSNG 521
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD I+Y +++ C +G D+A + EM K + ++ Y T ++ K G
Sbjct: 522 KKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISS 581
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFL 278
A R+ +MEK+G + + YN I G ++ E L+D+M++ G+ P+ +YN +
Sbjct: 582 AFRVLKDMEKRGCNKSLQTYNSLILGL--GSKNQIFEIYGLLDDMKEKGITPNICTYNNM 639
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV-- 336
++C C+ + +A + + + + G SPN ++FR I C + +F +VF+ ++ +
Sbjct: 640 ISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICG 699
Query: 337 HKIPDFNTV--KLLVEGLVKKKK 357
HK ++ + +LL+ G V + K
Sbjct: 700 HKEALYSLMFNELLIGGEVSEAK 722
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
I S+ + G A R M++ G +S+ ++N+L+ ++ L D++ +K
Sbjct: 569 FIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEK- 627
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++P+ +Y ++ C+ G A LL+EM KG+ ++ ++ K +
Sbjct: 628 GITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVV 687
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ ++ E+ A Y++ GG+ KEL D D YN L+
Sbjct: 688 KEVF-EIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEK 746
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTF 310
CK+EM++ A + + + G + +F
Sbjct: 747 LCKDEMLENASDILHKMIDKGYRFDPASF 775
>gi|297610680|ref|NP_001064892.2| Os10g0484900 [Oryza sativa Japonica Group]
gi|255679504|dbj|BAF26806.2| Os10g0484900 [Oryza sativa Japonica Group]
Length = 434
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 158/372 (42%), Gaps = 28/372 (7%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASP------VSSRYAQDLTVRRLAKSKRFSDIETLIESH 88
+R E DP + I+S V+ + P SR L RLA+ +R D+ +
Sbjct: 56 VRGEADPAR---IHSLVATALSRPDDYPRLHGSRPLFSLAASRLARLRR-PDLAASLLRA 111
Query: 89 KNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLY 148
D L I + D A+R F D RS +S +ALL A R+
Sbjct: 112 LLDSAPASPGLLARAISLFPGP---DDALRAFS--DSAPAARSDVSLSALLSALFRAGRV 166
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK---GVEVTTVT 205
D V + ++P + S+ +LL + + A +LL EM K V+
Sbjct: 167 DDVKSTLASAETSFGVAPGRASHNVLLHALVKNSELAAARKLLGEMAKKLKHRPAPDIVS 226
Query: 206 YTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMR 264
Y TVL QG+ E E+L E+ K ++ +V YN RI G+ + +EL+D M
Sbjct: 227 YNTVLAGYSAQGDEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAME 286
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVY---------EGLEENGCSPNATTFRTWIY 315
+ P+ ++YN L+ YCK + A +V+ EG + G S ++ T+
Sbjct: 287 SKDVAPNYLTYNALVQGYCKEGNVGSAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVLFR 346
Query: 316 HLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
L D A + K + P F VK LVEGLVK K EAK V+ + +
Sbjct: 347 SLVEKERLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKGGKSAEAKDVVAKMNLLVKGD 406
Query: 376 VLRAWKKVEEEL 387
AW+K+ + +
Sbjct: 407 AKVAWEKIADAV 418
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 41/349 (11%)
Query: 67 LTVRRLAKSKRFSDI-ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ V L S +F+ + + LIE + + ++ +Y +A + A+R F++M E
Sbjct: 120 IVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGE 179
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G V + LL+ + + FD++ +N P +Y +L + G S+
Sbjct: 180 FGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFN--PSVKTYSILTRGWGVVGDSN 237
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A ++ +EM +G + + Y ++L L K G +EA +++ EM+ GVD D Y++ I
Sbjct: 238 NAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFI 297
Query: 246 TN---------------------------TYG---------GDPERLKELIDEMRDAGLK 269
+ TY + E +++DEM + G+
Sbjct: 298 RSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVT 357
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PDT SYN + +C + ++ A + + ++ + C P+ T+ + L G FD+A +V
Sbjct: 358 PDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEV 417
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKK-KIKEA-KGVIRTIKKKFPPNV 376
++ P +T +++ G KKK K++EA K I + PP +
Sbjct: 418 WESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI 466
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 7/255 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L R +G G ++A + FD+M E G V+++N+LL A + D+ +F E+
Sbjct: 226 LTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSN- 284
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y + ++S C +L + K + TY V+ L K N EEA
Sbjct: 285 GVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEA 344
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLM 279
++ EM ++GV D +YN Y D + L+ M PD +YN ++
Sbjct: 345 YQILDEMIERGVTPDTWSYNA--IQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVL 402
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHK 338
+ D A +V+E + + G P+ +T+ I+ C ++A K F+ +
Sbjct: 403 KLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI 462
Query: 339 IPDFNTVKLLVEGLV 353
P TV+LL + L+
Sbjct: 463 PPYIATVELLRDRLL 477
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+ + +M + +FN +L A +S +K + E+ + ++P+ +SY
Sbjct: 181 DIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREM-ESVGITPNVVSYNT 239
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+ HC+ G A +L N M G+E VT+ ++++ K+G EA R +SEM+
Sbjct: 240 LIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMN 299
Query: 234 VDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
V + YN I N YG G+ ++ +EM G+K D ++YN L+ CK +A
Sbjct: 300 VTPNTVTYNTLI-NGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKA 358
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+ + L++ PNA+T+ I C N D+A++++K V P+ T K+L
Sbjct: 359 AFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSA 418
Query: 352 LVKKKKIKEAKGVI 365
VK + + A V+
Sbjct: 419 FVKNEDFEGAFNVL 432
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 126/265 (47%), Gaps = 5/265 (1%)
Query: 93 KITQEPYLCNLIRS-YGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDK 150
+I+ Y NL+ S ++G + A+ +M+ +G +V+S+N L+ C + L
Sbjct: 194 RISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLL--S 251
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
+ + K L P+ +++ L+ C G +A +EM+ V TVTY T++
Sbjct: 252 IATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLI 311
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLK 269
N + GN+ A +++ EM + GV D+ YN I G ++ L+ E+ L
Sbjct: 312 NGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLV 371
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
P+ +Y+ L++ C + D A ++Y+ + +GC PN TF+ + +F+ A+ V
Sbjct: 372 PNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNV 431
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVK 354
+ D NT+ + +GL +
Sbjct: 432 LMDMFARSMASDSNTLLEIYDGLCQ 456
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 120/262 (45%), Gaps = 24/262 (9%)
Query: 135 FNALLFACTRSRLYDKVPILFDEIPK------KYNLSPDKIS----YGLL---------L 175
F+ LLF+ R+ D P +FD + K K+ + D S YG L L
Sbjct: 115 FDTLLFS---YRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYL 171
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
S D D AL EM + + T+ VL+ L K G E+A + EME G+
Sbjct: 172 SSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGIT 231
Query: 236 LDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+V +YN I + G +L + M GL+P+ +++N L+ +CK + EA +
Sbjct: 232 PNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRF 291
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ ++ +PN T+ T I GN + A KV++E + D T L+ GL K
Sbjct: 292 FSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCK 351
Query: 355 KKKIKEAKGVIRTI-KKKFPPN 375
+ K K+A +++ + K+ PN
Sbjct: 352 EGKTKKAAFLVKELDKENLVPN 373
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 140/305 (45%), Gaps = 12/305 (3%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D AL Y + + SP S Y +L + L KS + +E +E + + P +
Sbjct: 181 DIALTFYREMRRCRISPNS--YTFNLVLSALCKSGK---LEKAVEVLREMESVGITPNVV 235
Query: 102 N---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDE 157
+ LI + G+ A + + M + G +V++FN+L+ C +L++ F E
Sbjct: 236 SYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHE-ANRFFSE 294
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ K N++P+ ++Y L+ + G+S+ A ++ EM GV+ +TY ++ L K+G
Sbjct: 295 M-KVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEG 353
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYN 276
++A L E++K+ + + + Y+ I+ + +R +L M +G P+ ++
Sbjct: 354 KTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFK 413
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
L + + KNE + A V + + ++ T LC G + A K+ E
Sbjct: 414 MLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEAR 473
Query: 337 HKIPD 341
IP+
Sbjct: 474 RLIPE 478
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A+R M++ +V+ ++ ++ + + R + LF ++ K
Sbjct: 165 LINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK- 223
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+SP+ +Y L+ C G +A+ L M ++ + +T+ T+++ L K+G +A
Sbjct: 224 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKA 283
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ M + + DV YN + + + + + D M G P ISY L+
Sbjct: 284 HYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLING 343
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK ++MD+A ++E + + G P+ T+ T I+ LC G A +F E V+ +IPD
Sbjct: 344 YCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPD 403
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
T ++L + L K ++ EA +++ I+
Sbjct: 404 LVTYRILFDYLCKNHRLAEAMVLLKVIE 431
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 115/237 (48%), Gaps = 2/237 (0%)
Query: 117 MRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLK 176
+ FD M G SVIS+ L+ + ++ DK LF+E+ ++ L PD ++Y L+
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ-GLIPDTVTYNTLIH 377
Query: 177 SHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL 236
C G A+ L +EM G VTY + + L K EA L +E +D
Sbjct: 378 GLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP 437
Query: 237 DVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVY 295
D+ Y++ + G+ E ++L ++ GL PD +Y ++ C+ ++ EA K++
Sbjct: 438 DIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLF 497
Query: 296 EGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
++ENGCSPNA T+ + +A ++F+E + D +T LLVE L
Sbjct: 498 GEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 2/261 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI G + A+R F M ++FN L+ A + + K + D + +
Sbjct: 234 SLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQS 293
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+L PD ++Y L+ HC K + + + M KG + ++YTT++N K ++
Sbjct: 294 -DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDK 352
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A L+ EM ++G+ D YN I + G L EM G PD ++Y L
Sbjct: 353 AMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFD 412
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CKN + EA + + +E P+ + + +C +G + A +F + P
Sbjct: 413 YLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHP 472
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
D T +++ GL ++ + EA
Sbjct: 473 DVRTYTIMINGLCQQGLLAEA 493
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 38/227 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRL------------YD 149
LI Y + + D AM F++M + G +++N L+ C RL Y
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399
Query: 150 KVP------ILFDEIPKKY---------------NLSPDKISYGLLLKSHCDSGSSDKAL 188
++P ILFD + K + NL PD Y +++ C +G + A
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNT 248
+L +++ +KG+ TYT ++N L +QG EA +L+ EM++ G + YN+ IT
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNL-ITRG 518
Query: 249 YGGDPERLK--ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
+ + E L+ +L EM G D +S L+ ++ +D++ K
Sbjct: 519 FLRNNETLRAIQLFQEMLSRGFSID-VSTTTLLVEMLSDDGLDQSVK 564
>gi|242063722|ref|XP_002453150.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
gi|241932981|gb|EES06126.1| hypothetical protein SORBIDRAFT_04g000850 [Sorghum bicolor]
Length = 757
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 23/288 (7%)
Query: 97 EPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-------CTRSRLYD 149
EP L LI +YG+A + A++ F M +LG PR+ +S+NA+L A R+Y+
Sbjct: 181 EPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAILCRGREAMARRIYN 240
Query: 150 KVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTV 209
++ D + +PD +Y L+ + A+ + EM+ GV TY +
Sbjct: 241 A--MIADGV------APDVSTYNTLIWGFGLCKKMETAVRVFGEMKGHGVTPDVTTYNAL 292
Query: 210 LNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDA 266
LN + G+ E A +++ EM KG++ + +YNV I G+ R++E L EM +
Sbjct: 293 LNAWVRTGDLESARKVFDEMTGKGIERNSVSYNVMIKGYVEGN--RVEEAVALFAEMGEK 350
Query: 267 GLKPDTISYNFLMTCYCKNE-MMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFD 324
GL+ ++ LM C ++ EA+K + + E +P + + F + LC +G+ D
Sbjct: 351 GLRLSEKTFAALMPGLCDDQGRAAEARKAVDDMAERRLTPKDKSVFLRLVTTLCKAGDLD 410
Query: 325 KAYKVFKESVMV-HKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
A +V ++S H + D +L+EGL K + A V+ + +K
Sbjct: 411 GALEVHRKSGQFKHVLVDPRQYGVLMEGLCAGGKSEMAIEVLDELMEK 458
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 6/239 (2%)
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR--LYDKVPILF 155
P + +I AG + A++ F G R ALL SR L ++
Sbjct: 110 PLVHGVISGAASAGRAELALQFFRFAYRRGGFRPDGDTFALLVPALASRRMLNHARCLVL 169
Query: 156 DEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYK 215
D +P ++++PD+ + L+ ++ + +A++L M + GV T ++Y VL +
Sbjct: 170 DTMPS-FSVAPDEPTLAALISAYGRAAIPQEAVKLFRMMPDLGVPRTALSYNAVLKAILC 228
Query: 216 QGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTI 273
+G A R+++ M GV DV+ YN I +G E + EM+ G+ PD
Sbjct: 229 RGREAMARRIYNAMIADGVAPDVSTYNTLIWG-FGLCKKMETAVRVFGEMKGHGVTPDVT 287
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKE 332
+YN L+ + + ++ A+KV++ + G N+ ++ I ++A +F E
Sbjct: 288 TYNALLNAWVRTGDLESARKVFDEMTGKGIERNSVSYNVMIKGYVEGNRVEEAVALFAE 346
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 167 DKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVT-------TVTYTTVLNCLYKQGNA 219
D YG+L++ C G S+ A+E+L+E+ KG ++ Y V+ L G+
Sbjct: 428 DPRQYGVLMEGLCAGGKSEMAIEVLDELMEKGTLLSPKSPVLEASAYNPVIEHLCSNGST 487
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
+AE + ++ KKGVD D AA+N I + G PE +E++ M + D S+ L
Sbjct: 488 TKAETFFRQLMKKGVD-DKAAFNSLIRGHAKEGVPEAAQEILAIMTRREVPTDPESHVLL 546
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K +AK + + ++G P+ F++ + L G A +V K +
Sbjct: 547 VDSFLKKNEPADAKTALDSMMQHGHLPSPALFKSVMEALFNDGRIQTASRVMKSMIEKGV 606
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ + ++E L + ++EA G +
Sbjct: 607 TENMDMAHKILEALFTRGHVEEAIGRV 633
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 133/284 (46%), Gaps = 46/284 (16%)
Query: 86 ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTR 144
E H DP + + N + GQ + A +QM E G + +FN L+ A C+
Sbjct: 319 EGH--DPDVFTYNIVVNCLCKNGQ---LEEAKGILNQMVERGCLPDITTFNTLIVALCSG 373
Query: 145 SRLYDKVPI----------------------------------LFDEIPKKYNLSPDKIS 170
+RL + + + LF+E+ K +PD+++
Sbjct: 374 NRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVT 432
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ + C G KAL+LL EME+ G +TVTY T+++ L K+ EEAE ++ +M+
Sbjct: 433 YNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMD 492
Query: 231 KKGVDLDVAAYNVRITNTYGGDPERL---KELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
+G+ + +N I +R+ +LI +M GL+P+ I+YN ++T YCK
Sbjct: 493 LQGISRNAITFNTLIDGLC--KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD 550
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+ +A + + + NG + T+ T I LC +G A K+ +
Sbjct: 551 IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLR 594
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 2/237 (0%)
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
+ +M E G V++FN L+ A R+ ++ +E+ ++PD+ ++ L++
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSS-GVAPDETTFTTLMQGF 230
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
+ GS AL + M G T VT ++N K G E+A + G + D
Sbjct: 231 VEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQ 290
Query: 239 AAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN + G +++D M G PD +YN ++ C CKN ++EAK +
Sbjct: 291 ITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
+ E GC P+ TTF T I LC ++A + ++ + PD T +L+ L K
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 162/351 (46%), Gaps = 11/351 (3%)
Query: 33 SKLRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDI-ETLIESHKN 90
+ LR + DPD AL + +++++ +P Y + +R+L + +D+ + L+ +
Sbjct: 49 TALREQPDPDAALRMLNAALAREDFAPGPEVYEE--IIRKLGAAAGAADLMKVLVTEMRR 106
Query: 91 DPKITQEPYLCNLIRSYGQAGMF-DHAMRTFDQMDEL-GTPRSVISFNALLFACTRSRLY 148
+ + + + + SY + +F D +Q+D L G + +N LL
Sbjct: 107 EGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKM 166
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
+ ++ E+ ++ + PD +++ L+K+ C + A+ +L EM + GV T+TT
Sbjct: 167 KLLETVYSEMGER-GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTT 225
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDA 266
++ ++G+ + A R+ + M + G NV I N Y G E I +
Sbjct: 226 LMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLI-NGYCKLGRVEDALGYIQQEIAN 284
Query: 267 GLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKA 326
G +PD I+YN + C+N + A KV + + + G P+ T+ + LC +G ++A
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 327 YKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
+ + V +PD T L+ L +++EA + R + K P+V
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDV 395
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 145/314 (46%), Gaps = 5/314 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++ALD+ V+ SP Y ++ + L K L E K+ E
Sbjct: 377 EEALDLARQVTLKGLSP--DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYN 434
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
LI + G A+ +M+ G PRS +++N ++ + ++ +FD++ +
Sbjct: 435 TLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQ 494
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+S + I++ L+ C D A +L+++M ++G++ +TY ++L KQG+ ++
Sbjct: 495 -GISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK 553
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A + M G ++DV Y I G + +L+ MR G++ +YN ++
Sbjct: 554 AADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQ 613
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHKI 339
+ +A ++ + E G P+A T++ LC G G+ +A+ E V I
Sbjct: 614 SLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFI 673
Query: 340 PDFNTVKLLVEGLV 353
P+F++ ++L EGL+
Sbjct: 674 PEFSSFRMLAEGLL 687
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 3/260 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D AM+ FD M E ++ + +LL A R+R D LF E+ ++ P +YGL
Sbjct: 166 DDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQR-GYGPSASTYGL 224
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSE-MEKK 232
LL+ C+ G S A ++ + M ++G TY +++ G EA+ L+ E +E +
Sbjct: 225 LLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGE 284
Query: 233 GVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEA 291
LD YNV I E E+ M D G P +YN L+ + K +D+A
Sbjct: 285 KALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKA 344
Query: 292 KKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
+++ +EE G SPN + T+I LC G ++A++ F++SV +PD T L+ G
Sbjct: 345 LQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRG 404
Query: 352 LVKKKKIKEAKGVIRTIKKK 371
L ++ EA + R + ++
Sbjct: 405 LFGANRMDEAHRLYREMGER 424
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 5/221 (2%)
Query: 134 SFNALLFACTRSRLYDKV-PILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLN 192
S+N L+ T+ D+ +L + + Y+ PD ++ GLL+ C+ + EL
Sbjct: 12 SYNLLVRGLTKLSSVDQARAMLSTMVGEGYD--PDVVTCGLLVDKFCEMKRVGEVCELFQ 69
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GG 251
E+E+ GV V + Y +L L G+ + + G V AY + G
Sbjct: 70 ELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTG 129
Query: 252 DPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
E++ EM + PD ++Y L++ CK+ D+A KV++ + E PN +
Sbjct: 130 KTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYT 188
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + C + D AY++F E + P +T LL+ L
Sbjct: 189 SLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCL 229
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
LCN RSY A +MR+ + + T + +L++ C + + +LF E+
Sbjct: 229 LCNGGRSY-LAYDIHSSMRSRGHVPDENT------YASLIYGCCMAGRITEAKVLFKEVL 281
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ D Y +L++ C + ++ALE+ M +KG T TY ++ +K
Sbjct: 282 EGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEV 341
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFL 278
++A +L+ ME+KG + Y+ I G E + + G PD ++YN L
Sbjct: 342 DKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNAL 401
Query: 279 MTCYCKNEMMDEAKKVYEGLEENG 302
+ MDEA ++Y + E G
Sbjct: 402 IRGLFGANRMDEAHRLYREMGERG 425
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Query: 229 MEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
M + GV D +YN+ + T ++ + ++ M G PD ++ L+ +C+ +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKL 347
+ E ++++ LE NG + + + L SG+FD +K +V +P K
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 348 LVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
+++ L+K K +EA V+ + KK P+
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKSVPD 148
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 4/191 (2%)
Query: 44 ALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN- 102
A DI+SS+ P + YA + + R ++ + L + K + + N
Sbjct: 238 AYDIHSSMRSRGHVPDENTYAS--LIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNV 295
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +A + A+ M + G ++ ++NAL+ ++ DK LF + +K
Sbjct: 296 LIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEK- 354
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ + Y + C G ++A E + +G VTY ++ L+ +EA
Sbjct: 355 GFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEA 414
Query: 223 ERLWSEMEKKG 233
RL+ EM ++G
Sbjct: 415 HRLYREMGERG 425
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 151/339 (44%), Gaps = 5/339 (1%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D D AL + + + +P ++ ++ + L +S + SD + + + +
Sbjct: 172 DLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWIT 231
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+I + + G + R DQM G +++++N LL R+ D+ +L DE+
Sbjct: 232 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEM- 290
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+++ PD +Y +L +G S L L E KGV + T + +LN L K G
Sbjct: 291 ASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPDTISYNF 277
+AE++ + G+ YN I N Y D + ++M+ ++PD I+YN
Sbjct: 351 AKAEQVLEMLVHTGLVPTTVIYNTLI-NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNA 409
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ CK EM+ +A+ + +E++G P+ TF T I +G +K + V +
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 469
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
D + +V+ K KI EA ++ I K PN
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 141/311 (45%), Gaps = 4/311 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y + + L K + + E ++E + + LI Y Q A F+Q
Sbjct: 335 YTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQ 394
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M I++NAL+ + + K L E+ +K + P ++ L+ ++ +G
Sbjct: 395 MKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGVDPSVETFNTLIDAYGTAG 453
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+K +L++M+ KG++ +++ +V+ K G EA + +M K V + YN
Sbjct: 454 QLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYN 513
Query: 243 VRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEE 300
I + Y GD E+ L+++M+++G+ ++YN L+ C++ +DEA+++ L
Sbjct: 514 -SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572
Query: 301 NGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKE 360
G P+ ++ T I C G+ DKA ++ +E P T LV L ++ +
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632
Query: 361 AKGVIRTIKKK 371
+ + + + K
Sbjct: 633 MECLYQQMLHK 643
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 41/255 (16%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI +YG AG + M + G VISF +++ A C ++ + V IL D I K
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK- 503
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+++P+ Y ++ ++ +SG +++A L+ +M+N GV + VTY +L L + +E
Sbjct: 504 -DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
AE ELI +R+ GL+PD +SYN +++
Sbjct: 563 AE----------------------------------ELIYTLRNQGLRPDVVSYNTIISA 588
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-- 339
C D+A ++ + + + G P T+ T + L +G ++++ M+HK
Sbjct: 589 CCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ--MLHKNVE 646
Query: 340 PDFNTVKLLVEGLVK 354
P + ++V+ V+
Sbjct: 647 PSSSIYGIMVDAYVR 661
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++I +Y ++G + A ++M G S++++N LL RS D+ L + +
Sbjct: 514 SIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-RN 572
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L PD +SY ++ + C+ G +DKALELL EM G+ T TY T+++ L G +
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 632
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI 245
E L+ +M K V+ + Y + +
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMV 656
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEM-ENKGVEVT-TVTYTTVLNCLYKQGNAEEAE 223
PD ++ ++++ +G D AL ++ M ++G +Y V+ L++ G +A
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214
Query: 224 RLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCY 282
+++ EM GV + YN I + GGD E L D+M G KP+ ++YN L++
Sbjct: 215 KVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGL 274
Query: 283 CKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDF 342
C+ MDE + + + + + P+ T+ L +G +F ES+ +
Sbjct: 275 CRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGA 334
Query: 343 NTVKLLVEGLVKKKKIKEAKGVIRTI 368
T +L+ GL K K+ +A+ V+ +
Sbjct: 335 YTCSILLNGLCKDGKVAKAEQVLEML 360
>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
Length = 455
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 139/274 (50%), Gaps = 11/274 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + + G HAM+ ++M+E G P + +++N+L+ C L + +L D++ K
Sbjct: 26 LVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLL-DKLMWK 84
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
L P++ +Y LL++ ++A++LL+E+ KG + V+Y +L L K+G EE
Sbjct: 85 -GLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEE 143
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A R + ++ KG + +V +YN+ + + + G E +L+ EM P ++YN L+
Sbjct: 144 AIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIG 203
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+ ++ A +V + + P+ATT+ I HLC G D K + + P
Sbjct: 204 SLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNP 263
Query: 341 D---FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ FN + + L K+ ++ EA +I+ + K
Sbjct: 264 NEGTFNAIAV----LCKQGRVPEAFSIIQNLGNK 293
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 69 VRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGT 128
V L K L+E + + T +L+R G + +++ D++ G
Sbjct: 27 VNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLMWKGL 86
Query: 129 PRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKAL 188
+ +++ LL A + R ++ L DEI K P+ +SY +LL C G +++A+
Sbjct: 87 VPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAK-GWQPNLVSYNVLLTGLCKEGRTEEAI 145
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN- 247
++ +KG V+Y +L L +G EEA +L +EM+ + + YN+ I +
Sbjct: 146 RFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSL 205
Query: 248 TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+ G E E++DEM A KP +YN ++ CK +D K + + + C+PN
Sbjct: 206 AFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMIHHRCNPNE 265
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFK 331
TF I LC G +A+ + +
Sbjct: 266 GTFNA-IAVLCKQGRVPEAFSIIQ 288
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 4/213 (1%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD SY L+ + C G+ A++L+ +ME G TVTY +++ L GN ++ +L
Sbjct: 18 PDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQL 77
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYC 283
++ KG+ + Y+ + Y G E +K L+DE+ G +P+ +SYN L+T C
Sbjct: 78 LDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMK-LLDEIIAKGWQPNLVSYNVLLTGLC 136
Query: 284 KNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFN 343
K +EA + + L G +PN ++ + LC G +++A ++ E + P
Sbjct: 137 KEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLV 196
Query: 344 TVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPN 375
T +L+ L +I+ A V+ ++ F P+
Sbjct: 197 TYNILIGSLAFHGRIEHAFEVLDEMVRASFKPS 229
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 123/301 (40%), Gaps = 36/301 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G + A+R F + G +V+S+N +L + +++ L E+ +
Sbjct: 131 LLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEMDSEE 190
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP ++Y +L+ S G + A E+L+EM + + TY ++ L K+G +
Sbjct: 191 R-SPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHLCKEGKLDLV 249
Query: 223 ERLWSEMEKKGVDLDVAAYN-VRITNTYGGDPERLK------------------------ 257
+ +M + + +N + + G PE
Sbjct: 250 IKCLDQMIHHRCNPNEGTFNAIAVLCKQGRVPEAFSIIQNLGNKQRSSTHDFYKGVITSL 309
Query: 258 ----------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
+L+ EM G PD +Y+ L+ C M+DEA +++ LEEN P
Sbjct: 310 CRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLEENDYRPIL 369
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
F I C SG D + + + V P+ T ++VEG+ +++ + A V++
Sbjct: 370 DNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKE 429
Query: 368 I 368
+
Sbjct: 430 L 430
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
+++ M ++G+ PD SY FL+ CK + A ++ E +EENG N T+ + + LC
Sbjct: 7 VMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLC 66
Query: 319 GSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
GN +++ ++ + + +P+ T L+E K++ + EA ++ I K + PN++
Sbjct: 67 MHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLV 126
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 10/288 (3%)
Query: 66 DLTVRRLAKSKRFSDIETLI---ESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
++ +R L R+ + L+ +S + P + L I S G +HA D+
Sbjct: 164 NIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNIL---IGSLAFHGRIEHAFEVLDE 220
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M S ++N ++ + D V D++ + +P++ ++ + C G
Sbjct: 221 MVRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQM-IHHRCNPNEGTFNAI-AVLCKQG 278
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
+A ++ + NK T Y V+ L ++GN A +L EM K G D Y+
Sbjct: 279 RVPEAFSIIQNLGNKQRSSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYS 338
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
I G + E+ + + +P ++N L+ +CK+ D + + E + E
Sbjct: 339 SLIRGLCIEGMLDEALEIFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEK 398
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
G +PN TT+ + + + A +V KE +++ ++ NT + LV
Sbjct: 399 GYTPNETTYTIIVEGIAHEEEKELAAEVLKE-LLLRQVMRRNTAERLV 445
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K K F+D + L + LIR Y + G D A+ F+ M
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+++N L+ ++ + L+D++ +K ++ PD ISYG +L C SG +AL L
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYGTVLNGFCSSGLLPEALNLC 595
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
++M KG+ VT T++ + G+ +A S+M G+ D +YN I
Sbjct: 596 DQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKE 655
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ E+ LI+EM GL+ + I+YN ++ +C M EA++V + E G +P+ T+
Sbjct: 656 ANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATY 715
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ I N +A++ E + +PD
Sbjct: 716 SSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 37/292 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A FD+M G ++SF++L+ R+ + + F E+ + + PD + Y +L+
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS-GIVPDNVIYTILI 439
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C +G+ AL++ +EM +G + VTY T LN L K+ +A+ L++EM ++G+
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499
Query: 236 LDVAAYNVRI---------------------TN------TY---------GGDPERLKEL 259
D + I TN TY G+ R KEL
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
D+M + PD ISY ++ +C + ++ EA + + + E G PN T T I C
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
SG+ KAY+ + + IPD + L++G +K+ +++A +I ++K+
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
MF A F++M E G +F L+ + DK LF+ + + NL PDK++Y
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTY 540
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C +G +A EL ++M K + ++Y TVLN G EA L +M +
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
KG+ ++ N I GD + E + +M G+ PD+ SYN L+ Y K +++
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A + +E+ G N T+ + C G +A +V ++ + + PD T L+
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Query: 351 GLVKKKKIKEA 361
G V + +KEA
Sbjct: 721 GHVSQDNMKEA 731
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 157/348 (45%), Gaps = 25/348 (7%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
R D L VS H+ + S + V L + +R S+ + I +
Sbjct: 108 FRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGV 167
Query: 95 TQEPYLCNLIRS---YGQAGM-FDHAMRTFDQMDEL-------------GTPRSVISFNA 137
++ + +LI + +G G+ +D +RT+ Q +L G S+ + N
Sbjct: 168 SRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNK 227
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
LL R+ D ++ E+ + + + + +++ + C + + L++ME K
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRG-GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK 286
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDP 253
GV VTY T++N ++G EEA +L + +G++ + YN + YG G
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAIL---YGLCKIGKY 343
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+R K+++ EM GL P+ +YN L+ C+ + + EA+++++ + G P+ +F +
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
I L +G+ +A F+E +PD +L++G + + +A
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 38/298 (12%)
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CN L+ + G D A + ++ G +V + N ++ A + R ++ V ++
Sbjct: 225 CNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDME 284
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + D ++Y L+ ++C G ++A +LLN ++G+E +TY +L L K G
Sbjct: 285 GK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTIS---- 274
+ A+ + EM + G+ + A YN + D +E+ DEM G+ PD +S
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 275 -------------------------------YNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
Y L+ +C+N + +A K+ + + GC
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ T+ T++ LC F A +F E V +PDF T L+ G K + +A
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y LL++++ + + E + KGV V+ +L L + G + A ++ E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 231 KKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ G++L+V N+ + N D E + + +M G+ D ++YN L+ YC+ ++
Sbjct: 250 RGGIELNVYTLNIMV-NALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+EA ++ G P T+ +Y LC G +D+A V E + + P+ T L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 349 VEGLVKKKKIKEAKGVIRTIKKK 371
+ + ++ I EA+ + + ++
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRR 391
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKAL+++ ++ + P Y + + K+ + L + I
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTY--NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYG 576
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ + +G+ A+ DQM E G ++++ N L+ RS +P ++ + K
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS---GDMPKAYEYLSKM 633
Query: 162 YN--LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + PD SY L+ + + +KA L+NEME +G++ +TY +LN +G
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKM 693
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPD 271
+EAE++ +M + G++ D A Y+ I D +KE DEM GL PD
Sbjct: 694 QEAEQVLRKMIEIGINPDGATYSSLINGHVSQD--NMKEAFRFHDEMLQRGLVPD 746
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y G FD M G + +FN L+ A + DK I+F+E+ + +
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM-RDH 425
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++Y ++ + C G D A+E N+M ++GV Y ++ G+ +A
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L SE+ G+ LD+ + I N G + + D + GL PD + YN LM
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M++A +V++ + G PN + T + C G D+ +F+E + P
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
++++GL + + AK
Sbjct: 606 TILYNIIIDGLFEAGRTVPAK 626
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A F +M + G P ++++++++ A ++R DK ++ K
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNK- 285
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y L+ + +G +A+ + EM + + V T++ L K G +EA
Sbjct: 286 GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ M KG + DV +Y + + N Y G + +L D M G+ PD ++N L+
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIML-NGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 404
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y M+D+A ++ + ++G P+ T+ T I LC G D A + F + + +P
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D L++G + +AK +I I
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEI 492
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 159/390 (40%), Gaps = 37/390 (9%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
G+ + ++ + E D +KA D++ + + P Y+ V L K++
Sbjct: 213 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS--VVHALCKAR 270
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
E + N + NLI Y G + A+R F +M V++ N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKY---------------------------------- 162
L+ + + + +FD + K
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++PD ++ +L+K++ + G DKA+ + NEM + GV+ VTY TV+ L + G ++A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++M +GV D AY+ I G + KELI E+ + G++ D + + ++
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +A+ +++ G P+A + + C G +KA +VF V P+
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
LV G K +I E + R + +K
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE-LLN 192
++ L+ CTR+ + F ++ + L D I LLK C++ +D+AL+ LL+
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRT-GLRVDAIIASHLLKGFCEAKRTDEALDILLH 173
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRITNTYG 250
G +Y +L L QG + +A+ L M + G DV AYN I +
Sbjct: 174 RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFK 233
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
GD + +L EM G+ PD ++Y+ ++ CK MD+A+ + G P+ T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ IY +G + +A +VFKE +PD + L+ L K KIKEA+ V T+
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353
Query: 370 KK 371
K
Sbjct: 354 MK 355
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 134/314 (42%), Gaps = 2/314 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V +YA ++ + LI N+ + ++I + + G A
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD +G + +N L+ +K +FD + + P+ + YG L+ +
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVGYGTLVNGY 581
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G D+ L L EM KG++ +T+ Y +++ L++ G A+ + EM + G+ ++
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Query: 239 AAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y++ + + + L E+R +K D I+ N ++ + ++EAK ++
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ +G P A T+ I +L G ++A +F PD + +V L+KK +
Sbjct: 702 ISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 761
Query: 358 IKEAKGVIRTIKKK 371
I A + I ++
Sbjct: 762 IVRAGAYLSKIDER 775
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 19/240 (7%)
Query: 154 LFDEIPKKYNLSPDKISYGLLL-------KSHCDSGSSDKALELLNEMENKG-----VEV 201
L DE+ ++ D+ G L + C SG + A+ L N ++ +
Sbjct: 53 LLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPA-LAVALFNRAASRAQGPRVLSP 111
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD--VAAYNVRITNTYGGDPERLKEL 259
T+ TY +++C + E A + ++ + G+ +D +A++ ++ E L L
Sbjct: 112 TSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL 171
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG--CSPNATTFRTWIYHL 317
+ + G PD SYN L+ C +A + + E G CSP+ + T I
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGF 231
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPN 375
G+ +KA +FKE V PD T +V L K + + +A+ +R + K P N
Sbjct: 232 FKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDN 291
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A+ F ++ + +I+ N ++ ++R ++ LF I + L P ++Y
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS-GLVPCAVTYS 715
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+++ + G ++A ++ + M+N G E + V+ L K+ A S+++++
Sbjct: 716 IMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775
Query: 233 GVDLD 237
L+
Sbjct: 776 NFSLE 780
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R ++G A FD+M G +V++FN L+ C S L + + + K
Sbjct: 120 LMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANAL--RGLMAK 177
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD +YG ++ C +G A+E+ EM +G+ TV TT+++ K+G+
Sbjct: 178 AGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTA 237
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EM +GV D+ AYN + D + ++++EMR GLKPD ++Y L+
Sbjct: 238 GLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLID 297
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D A ++ + + + G + + T+ I L +G A ++ E + P
Sbjct: 298 GCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 357
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T ++++ K +K ++ ++ K
Sbjct: 358 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 388
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 5/298 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ L K+ R D + E L LI ++ + G + +
Sbjct: 185 YTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWE 244
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++++NAL+ R R + +E+ +K L PDK++Y L+ C G
Sbjct: 245 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM-RKDGLKPDKVTYTTLIDGCCKEG 303
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D A+E+ EM ++GV + VTYT +++ L K G + +AER+ EM + G+ D Y
Sbjct: 304 ELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT 363
Query: 243 VRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I GD + + + EM++ G P ++YN +M +C M A + +
Sbjct: 364 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 423
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
G PN T+ + C G ++ MV DF L+ VKKK K
Sbjct: 424 GVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVS---DFGVYTSLINEFVKKKSAK 478
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 49/266 (18%)
Query: 145 SRLYDKVPILFDEIPKKY---------NLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
S L +++P +P+ Y + P+ + +L++ SG A + +EM
Sbjct: 86 SDLMNRLP----SVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEML 141
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV---------RIT 246
+GV+ T VT+ T+++ + K + A L M K G+ DV Y RI
Sbjct: 142 RRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQ 201
Query: 247 NTY---------GGDPER--LKELID----------------EMRDAGLKPDTISYNFLM 279
+ G +P L LID EM G+K D ++YN L+
Sbjct: 202 DAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALV 261
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+ M A + E + ++G P+ T+ T I C G D A ++ +E
Sbjct: 262 NGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVA 321
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
D T L+ GL K + +A+ ++
Sbjct: 322 LDDVTYTALISGLSKAGRSVDAERIL 347
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 8/279 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I G+ G+ D FD+M G R+V + A++ A R+ + L + + K+
Sbjct: 142 MITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGM-KQE 200
Query: 163 NLSPDKISYGLLLKSHCDSGSSD--KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
+SP ++Y ++ + C G D L L EM ++G++ +TY T+L +G +
Sbjct: 201 RVSPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGD 259
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFL 278
EAE ++ M + G+ D+ Y+ + T+G E++ EL+ EM G PD SYN L
Sbjct: 260 EAEMVFRTMNESGIVPDINTYSY-LVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVL 318
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ Y + + EA V+ ++ GC NA T+ + G +D +F E + +
Sbjct: 319 LEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNT 378
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIR-TIKKKFPPNV 376
PD T +L++ + KE + +++ PN+
Sbjct: 379 DPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNM 417
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
Query: 154 LFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCL 213
LF + ++ P++ Y +++ G DK E+ +EM + GV T YT V+N
Sbjct: 122 LFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAY 181
Query: 214 YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGG--DPERLKELIDEMRDAGLKPD 271
+ G + L + M+++ V + YN I G D E L L EMR G++PD
Sbjct: 182 GRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 241
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
I+YN L+ + DEA+ V+ + E+G P+ T+ + +K ++ +
Sbjct: 242 VITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLR 301
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
E +PD + +L+E + IKEA V R ++
Sbjct: 302 EMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQ 339
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 141/334 (42%), Gaps = 40/334 (11%)
Query: 68 TVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELG 127
T +L + ++ S++ +ES N P IT L + +Y + G AM F QM G
Sbjct: 286 TFGKLNRLEKVSELLREMESGGNLPDITSYNVL---LEAYAELGSIKEAMDVFRQMQAAG 342
Query: 128 TPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKA 187
+ +++ LL + YD V +F E+ K N PD +Y +L++ + G +
Sbjct: 343 CVANAATYSVLLNLYGKHGRYDDVRDIFLEM-KVSNTDPDAGTYNILIQVFGEGGYFKEV 401
Query: 188 LELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN----- 242
+ L ++M + VE TY ++ K G E+A+++ M +KG+ AY
Sbjct: 402 VTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEA 461
Query: 243 -------------------------VRITNTY------GGDPERLKELIDEMRDAGLKPD 271
V N++ GG + + ++ M ++GLK D
Sbjct: 462 FGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRD 521
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
S+N ++ + + +EA K Y +E+ C PN T + C +G D++ + F+
Sbjct: 522 VHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQ 581
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
E +P L++ K ++ +A +I
Sbjct: 582 EIKASGILPSVMCYCLMLALYAKNDRLNDAYNLI 615
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 7/272 (2%)
Query: 103 LIRSYGQAGM-FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+I + + G+ ++ + F +M G VI++N LL AC L D+ ++F + +
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM-NE 270
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ PD +Y L+++ +K ELL EME+ G +Y +L + G+ +E
Sbjct: 271 SGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKE 330
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLM 279
A ++ +M+ G + A Y+V + N YG G + ++++ EM+ + PD +YN L+
Sbjct: 331 AMDVFRQMQAAGCVANAATYSV-LLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILI 389
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGN-FDKAYKVFKESVMVHK 338
+ + E ++ + E PN T+ I+ CG G ++ A K+
Sbjct: 390 QVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA-CGKGGLYEDAKKILLHMNEKGI 448
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
+P ++E + +EA V T+ +
Sbjct: 449 VPSSKAYTGVIEAFGQAALYEEALVVFNTMNE 480
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 131/293 (44%), Gaps = 4/293 (1%)
Query: 43 KALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCN 102
+A+D++ + A V++ + + K R+ D+ + K
Sbjct: 330 EAMDVFRQMQA--AGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNI 387
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ +G+ G F + F M E ++ ++ L+FAC + LY+ + + +K
Sbjct: 388 LIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEK- 446
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +Y ++++ + ++AL + N M G T TY + ++ + G +EA
Sbjct: 447 GIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEA 506
Query: 223 ERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E + S M + G+ DV ++N I GG E + EM A +P+ ++ +++
Sbjct: 507 EAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSV 566
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
YC ++DE+++ ++ ++ +G P+ + + + + AY + E +
Sbjct: 567 YCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMI 619
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 125/271 (46%), Gaps = 6/271 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDE--LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
+ + + Q G + ++R F M P I + ++ R L DK +FDE+P
Sbjct: 106 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHI-YTIMITLLGREGLLDKCREVFDEMPS 164
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG-NA 219
++ Y ++ ++ +G +LELLN M+ + V + +TY TV+N + G +
Sbjct: 165 N-GVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDW 223
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFL 278
E L++EM +G+ DV YN + + G + + + M ++G+ PD +Y++L
Sbjct: 224 EGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYL 283
Query: 279 MTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK 338
+ + K +++ ++ +E G P+ T++ + G+ +A VF++
Sbjct: 284 VQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGC 343
Query: 339 IPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ + T +L+ K + + + + +K
Sbjct: 344 VANAATYSVLLNLYGKHGRYDDVRDIFLEMK 374
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+R ++G A FD+M G +V++FN L+ C S L + + + K
Sbjct: 248 LMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANAL--RGLMAK 305
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
++PD +YG ++ C +G A+E+ EM +G+ TV TT+++ K+G+
Sbjct: 306 AGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTA 365
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
L EM +GV D+ AYN + D + ++++EMR GLKPD ++Y L+
Sbjct: 366 GLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLID 425
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK +D A ++ + + + G + + T+ I L +G A ++ E + P
Sbjct: 426 GCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 485
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
D T ++++ K +K ++ ++ K
Sbjct: 486 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 516
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 5/298 (1%)
Query: 63 YAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQ 122
Y ++ L K+ R D + E L LI ++ + G + +
Sbjct: 313 YTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWE 372
Query: 123 MDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSG 182
M G ++++NAL+ R R + +E+ +K L PDK++Y L+ C G
Sbjct: 373 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEM-RKDGLKPDKVTYTTLIDGCCKEG 431
Query: 183 SSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYN 242
D A+E+ EM ++GV + VTYT +++ L K G + +AER+ EM + G+ D Y
Sbjct: 432 ELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT 491
Query: 243 VRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
+ I GD + + + EM++ G P ++YN +M +C M A + +
Sbjct: 492 MVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNI 551
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
G PN T+ + C G ++ MV DF L+ VKKK K
Sbjct: 552 GVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVS---DFGVYTSLINEFVKKKSAK 606
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 49/266 (18%)
Query: 145 SRLYDKVPILFDEIPKKY---------NLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
S L +++P +P+ Y + P+ + +L++ SG A + +EM
Sbjct: 214 SDLMNRLP----SVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEML 269
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNV---------RIT 246
+GV+ T VT+ T+++ + K + A L M K G+ DV Y RI
Sbjct: 270 RRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQ 329
Query: 247 NTY---------GGDPER--LKELID----------------EMRDAGLKPDTISYNFLM 279
+ G +P L LID EM G+K D ++YN L+
Sbjct: 330 DAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALV 389
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
+C+ M A + E + ++G P+ T+ T I C G D A ++ +E
Sbjct: 390 NGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVA 449
Query: 340 PDFNTVKLLVEGLVKKKKIKEAKGVI 365
D T L+ GL K + +A+ ++
Sbjct: 450 LDDVTYTALISGLSKAGRSVDAERIL 475
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 12/283 (4%)
Query: 95 TQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVP 152
T +P C L+ + + G +AM+ ++M+E G P + +++N+L+ C L +
Sbjct: 129 TPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQ 188
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D+ KK L P+ +Y LL++ +D+A+ LL+E+ KG + V+Y +L
Sbjct: 189 IL-DKFMKK-GLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTG 246
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPD 271
L K+G EEA + + ++ KG +V +YN+ + + Y G E+ KEL+ EM P
Sbjct: 247 LCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPS 306
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
+++N L+ + D+A +V + + A ++ I LC G D K
Sbjct: 307 IVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLD 366
Query: 332 ESVMVHKIPD---FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ + P+ +N + +L E + K++EA +I+++ K
Sbjct: 367 QMMYRRCNPNEGTYNAIAVLCE----EGKVQEAFSIIQSLGNK 405
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 36/301 (11%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G + AM+ F + G +V+S+N LL + ++K L E+
Sbjct: 243 LLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGE 302
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP +++ +L+ S G +D+ALE+L++M + T +Y ++ L K+G +
Sbjct: 303 R-SPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLV 361
Query: 223 ERLWSEMEKKGVDLDVAAYNV--------------RITNTYG------------------ 250
+ +M + + + YN I + G
Sbjct: 362 VKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSL 421
Query: 251 ---GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNA 307
G+ +L+ EM G PD+ +Y+ L+ C M+DEA +++ +EEN C P+
Sbjct: 422 CRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDV 481
Query: 308 TTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
F I LC D + VF+ V +P+ T ++VEG+ +++++ A V++
Sbjct: 482 DNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKE 541
Query: 368 I 368
+
Sbjct: 542 L 542
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 3/260 (1%)
Query: 114 DHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
D A+R D++ G +++S+N LL + ++ F ++P K SP+ +SY +
Sbjct: 219 DEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSK-GFSPNVVSYNI 277
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LL+S C G +KA ELL EM+ + VT+ ++ L G ++A + +M +
Sbjct: 278 LLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRAR 337
Query: 234 VDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
A+YN I G + + + +D+M P+ +YN + C+ + EA
Sbjct: 338 FKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAI-AVLCEEGKVQEAF 396
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+ + L S ++ I LC GN A+++ E +PD T L+ GL
Sbjct: 397 SIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGL 456
Query: 353 VKKKKIKEAKGVIRTIKKKF 372
+ + EA + +++ +
Sbjct: 457 CSEGMLDEAMEIFSIMEENY 476
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 36/236 (15%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD L+ C S KA +++ M G + T ++N L K+GN A +L
Sbjct: 95 PDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQL 154
Query: 226 WSEMEKKGVDLDVAAYN--VRITNTYGGDPERLK-------------------------- 257
+ME+ G + YN VR +G + L+
Sbjct: 155 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYK 214
Query: 258 --------ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
L+DE+ G KP+ +SYN L+T CK +EA + + L G SPN +
Sbjct: 215 ERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVS 274
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
+ + LC G ++KA ++ E + P T +L+ L + +A V+
Sbjct: 275 YNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVL 330
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 258 ELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHL 317
++++ M +G PD S FL+ CK + A ++ E +EE G N T+ + + L
Sbjct: 118 KVMELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGL 177
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
C GN ++ ++ + + +P+ T L+E K++ EA ++ + K PN+
Sbjct: 178 CMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNL 237
Query: 377 L 377
+
Sbjct: 238 V 238
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
++ M G KPD LM CK+ M +A KV E + +G +P+ + + +LC
Sbjct: 85 LEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCK 144
Query: 320 SGNFDKAYKVFKESVMVHKIPDF----NTVKL--LVEGLVKKKKIKEAKGVI-RTIKKKF 372
GN A + +V K+ ++ NTV LV GL + ++ ++ + +KK
Sbjct: 145 RGNVGYAMQ------LVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGL 198
Query: 373 PPNVL 377
PNV
Sbjct: 199 VPNVF 203
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LIR GM D AM F M+E V +FNAL+ + R D ++F+ + KK
Sbjct: 451 SLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKK 510
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
P++ +Y ++++ + A +L E+
Sbjct: 511 -GYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I ++ ++ + + A+ +QM G +FN LL +S ++K +F+E K
Sbjct: 88 IINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNE--TKG 145
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ D S+G+++K C+ G DK E+L +ME G+ V YTT+++ K G+ E
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 205
Query: 223 ERLWSEM------------------------EKKGVDL-----------DVAAYNVRITN 247
++L+ +M +K G++L +V YN I
Sbjct: 206 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 265
Query: 248 TYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPN 306
G EL DEMR+ G+ + ++YN L+ C+ + EA+++ ++ +G SPN
Sbjct: 266 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPN 325
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
++ T I C GN DKA +F + + P T +L+ G + K ++R
Sbjct: 326 LISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVR 385
Query: 367 TIKKK 371
++ +
Sbjct: 386 EMEAR 390
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 4/275 (1%)
Query: 111 GMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKIS 170
G ++A FD+M E G +V+++N L+ + R + L + K+ LSP+ IS
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM-KRDGLSPNLIS 328
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y L+ +C G+ DKA L N+M++ G + TY ++ + N+ + EME
Sbjct: 329 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 388
Query: 231 KKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMD 289
+G+ Y + + D E+ ++ M AGL D Y L+ C M
Sbjct: 389 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 448
Query: 290 EAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLV 349
EA K+++ L+E PN + T IY C G+ +A ++ KE +P+ + +
Sbjct: 449 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTI 508
Query: 350 EGLVKKKKIKEAKGVIR-TIKKKFPPNVLRAWKKV 383
L K +K EA+ +++ I+ P++ W +
Sbjct: 509 XILCKDEKWTEAEVLLKDMIELGLKPSI-SIWNMI 542
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 160/379 (42%), Gaps = 40/379 (10%)
Query: 33 SKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDP 92
+ +RS+ P++AL + + P S+ + L + L KS F + K +
Sbjct: 91 AHVRSQL-PEQALFYXNQMIGRGLVPGSNTFNNLLIL--LIKSNFFEKAWRVFNETKGNV 147
Query: 93 KITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVP 152
K+ + +I+ + G D QM+E+G +V+ + L+ C ++ ++
Sbjct: 148 KLDVYSFGI-MIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 206
Query: 153 ILF------DEIPKKY----------------------------NLSPDKISYGLLLKSH 178
LF D + +Y + P+ +Y ++
Sbjct: 207 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 266
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C+ G + A EL +EM +GV VTY T++ L ++ EAERL M++ G+ ++
Sbjct: 267 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 326
Query: 239 AAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
+YN I G+ ++ L ++M+ +G P +YN L+ + + + +
Sbjct: 327 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 386
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+E G SP+ T+ + L S N +KA++++ + D +L+ GL
Sbjct: 387 MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGD 446
Query: 358 IKEAKGVIRTIKK-KFPPN 375
+KEA + +++ + PN
Sbjct: 447 MKEASKLFKSLDEMHLKPN 465
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLI---ESHKNDP-KITQE 97
DKA +++ + SP + Y ++ + +++K + + ++ E+ P K+T
Sbjct: 343 DKASSLFNQMKSSGQSPSLATY--NILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYT 400
Query: 98 PYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE 157
+ L+RS + A + + M++ G + + L+ + LF
Sbjct: 401 ILMDALVRSDN----IEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 456
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
+ + + L P+ + Y ++ +C GSS +AL LL EM G+ +Y + + L K
Sbjct: 457 LDEMH-LKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDE 515
Query: 218 NAEEAERLWSEMEKKGVDLDVAAYNV 243
EAE L +M + G+ ++ +N+
Sbjct: 516 KWTEAEVLLKDMIELGLKPSISIWNM 541
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 2/261 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++ Y G FD M G + +FN L+ A + DK I+F+E+ + +
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM-RDH 425
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P ++Y ++ + C G D A+E N+M ++GV Y ++ G+ +A
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L SE+ G+ LD+ + I N G + + D + GL PD + YN LM
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDG 545
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC M++A +V++ + G PN + T + C G D+ +F+E + P
Sbjct: 546 YCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
++++GL + + AK
Sbjct: 606 TILYNIIIDGLFEAGRTVPAK 626
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 4/268 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + G + A F +M + G P ++++++++ A ++R DK ++ K
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD +Y L+ + +G +A+ + EM + + V T++ L K G +EA
Sbjct: 287 VL-PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEA 345
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
++ M KG + DV +Y + + N Y G + +L D M G+ P ++N L+
Sbjct: 346 RDVFDTMAMKGQNPDVFSYTIML-NGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 404
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
Y M+D+A ++ + ++G P+ T+ T I LC G D A + F + + +P
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTI 368
D L++G + +AK +I I
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEI 492
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 158/391 (40%), Gaps = 39/391 (9%)
Query: 17 AGSSTTASSISVSKAKSKLRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSK 76
G+ + ++ + E D +KA D++ + + P Y+ V L K++
Sbjct: 213 GGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS--VVHALCKAR 270
Query: 77 RFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFN 136
E + N + NLI Y G + A+R F +M V++ N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330
Query: 137 ALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY------------------------- 171
L+ + + + +FD + K +PD SY
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389
Query: 172 ----------GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+L+K++ + G DKA+ + NEM + GV+ VTY TV+ L + G ++
Sbjct: 390 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A +++M +GV D AY+ I G + KELI E+ + G++ D + + ++
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + +A+ +++ G P+A + + C G +KA +VF V P
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+ LV G K +I E + R + +K
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQK 600
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 134 SFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALE-LLN 192
++ L+ CTR+ + F ++ + L D I LLK C++ +D+AL+ LL+
Sbjct: 115 TYAILMDCCTRAHRPELALAFFGQLLRT-GLRVDAIIASHLLKGFCEAKRTDEALDILLH 173
Query: 193 EMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDL--DVAAYNVRITNTYG 250
G +Y +L L QG + +A+ L M + G DV AYN I +
Sbjct: 174 RTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFK 233
Query: 251 -GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
GD + +L EM G+ PD ++Y+ ++ CK MD+A+ + G P+ T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
+ IY +G + +A +VFKE +PD + L+ L K KIKEA+ V T+
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353
Query: 370 KK 371
K
Sbjct: 354 MK 355
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 134/314 (42%), Gaps = 2/314 (0%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMR 118
V +YA ++ + LI N+ + ++I + + G A
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 119 TFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
FD +G + +N L+ +K +FD + + P+ + YG L+ +
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA-GIEPNVVGYGTLVNGY 581
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
C G D+ L L EM KG++ +T+ Y +++ L++ G A+ + EM + G+ ++
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Query: 239 AAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
Y++ + + + L E+R +K D I+ N ++ + ++EAK ++
Sbjct: 642 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 701
Query: 298 LEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
+ +G P A T+ I +L G ++A +F PD + +V L+KK +
Sbjct: 702 ISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 761
Query: 358 IKEAKGVIRTIKKK 371
I A + I ++
Sbjct: 762 IVRAGAYLSKIDER 775
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 102/240 (42%), Gaps = 19/240 (7%)
Query: 154 LFDEIPKKYNLSPDKISYGLLL-------KSHCDSGSSDKALELLNEMENKG-----VEV 201
L DE+ ++ D+ G L + C SG + A+ L N ++ +
Sbjct: 53 LLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPA-LAVALFNRAASRAQGPRVLSP 111
Query: 202 TTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLD--VAAYNVRITNTYGGDPERLKEL 259
T+ TY +++C + E A + ++ + G+ +D +A++ ++ E L L
Sbjct: 112 TSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDIL 171
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENG--CSPNATTFRTWIYHL 317
+ + G PD SYN L+ C +A + + E G CSP+ + T I
Sbjct: 172 LHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGF 231
Query: 318 CGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPN 375
G+ +KA +FKE V PD T +V L K + + +A+ +R + K P N
Sbjct: 232 FKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDN 291
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 113 FDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYG 172
FD A+ F ++ + +I+ N ++ ++R ++ LF I + L P ++Y
Sbjct: 657 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS-GLVPCAVTYS 715
Query: 173 LLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKK 232
+++ + G ++A ++ + M+N G E + V+ L K+ A S+++++
Sbjct: 716 IMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775
Query: 233 GVDLD 237
L+
Sbjct: 776 NFSLE 780
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L K K F+D + L + LIR Y + G D A+ F+ M
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536
Query: 132 VISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELL 191
+++N L+ ++ + L+D++ +K ++ PD ISYG +L C SG +AL L
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYGTVLNGFCSSGLLPEALNLC 595
Query: 192 NEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG- 250
++M KG+ VT T++ + G+ +A S+M G+ D +YN I
Sbjct: 596 DQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKE 655
Query: 251 GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
+ E+ LI+EM GL+ + I+YN ++ +C M EA++V + E G +P+ T+
Sbjct: 656 ANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATY 715
Query: 311 RTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+ I N +A++ E + +PD
Sbjct: 716 SSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 37/292 (12%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A FD+M G ++SF++L+ R+ + + F E+ + + PD + Y +L+
Sbjct: 381 AQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS-GIVPDNVIYTILI 439
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C +G+ AL++ +EM +G + VTY T LN L K+ +A+ L++EM ++G+
Sbjct: 440 DGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMV 499
Query: 236 LDVAAYNVRI---------------------TN------TY---------GGDPERLKEL 259
D + I TN TY G+ R KEL
Sbjct: 500 PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKEL 559
Query: 260 IDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCG 319
D+M + PD ISY ++ +C + ++ EA + + + E G PN T T I C
Sbjct: 560 WDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCR 619
Query: 320 SGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
SG+ KAY+ + + IPD + L++G +K+ +++A +I ++K+
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKR 671
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 118/251 (47%), Gaps = 2/251 (0%)
Query: 112 MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISY 171
MF A F++M E G +F L+ + DK LF+ + + NL PDK++Y
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT-NLKPDKVTY 540
Query: 172 GLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEK 231
L+ C +G +A EL ++M K + ++Y TVLN G EA L +M +
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600
Query: 232 KGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
KG+ ++ N I GD + E + +M G+ PD+ SYN L+ Y K +++
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A + +E+ G N T+ + C G +A +V ++ + + PD T L+
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720
Query: 351 GLVKKKKIKEA 361
G V + +KEA
Sbjct: 721 GHVSQDNMKEA 731
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 157/348 (45%), Gaps = 25/348 (7%)
Query: 35 LRSEFDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKI 94
R D L VS H+ + S + V L + +R S+ + I +
Sbjct: 108 FRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGV 167
Query: 95 TQEPYLCNLIRS---YGQAGM-FDHAMRTFDQMDEL-------------GTPRSVISFNA 137
++ + +LI + +G G+ +D +RT+ Q +L G S+ + N
Sbjct: 168 SRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNK 227
Query: 138 LLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENK 197
LL R+ D ++ E+ + + + + +++ + C + + L++ME K
Sbjct: 228 LLGGLVRTGWVDLAWEIYGEVVRG-GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGK 286
Query: 198 GVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG----GDP 253
GV VTY T++N ++G EEA +L + +G++ + YN + YG G
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAIL---YGLCKIGKY 343
Query: 254 ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+R K+++ EM GL P+ +YN L+ C+ + + EA+++++ + G P+ +F +
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
I L +G+ +A F+E +PD +L++G + + +A
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA 451
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 38/298 (12%)
Query: 101 CN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
CN L+ + G D A + ++ G +V + N ++ A + R ++ V ++
Sbjct: 225 CNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDME 284
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
K + D ++Y L+ ++C G ++A +LLN ++G+E +TY +L L K G
Sbjct: 285 GK-GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY 343
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTIS---- 274
+ A+ + EM + G+ + A YN + D +E+ DEM G+ PD +S
Sbjct: 344 DRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSL 403
Query: 275 -------------------------------YNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
Y L+ +C+N + +A K+ + + GC
Sbjct: 404 IGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGC 463
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
+ T+ T++ LC F A +F E V +PDF T L+ G K + +A
Sbjct: 464 FMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 96/203 (47%), Gaps = 3/203 (1%)
Query: 171 YGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEME 230
Y LL++++ + + E + KGV V+ +L L + G + A ++ E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 231 KKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMM 288
+ G++L+V N+ + N D E + + +M G+ D ++YN L+ YC+ ++
Sbjct: 250 RGGIELNVYTLNIMV-NALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308
Query: 289 DEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLL 348
+EA ++ G P T+ +Y LC G +D+A V E + + P+ T L
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368
Query: 349 VEGLVKKKKIKEAKGVIRTIKKK 371
+ + ++ I EA+ + + ++
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRR 391
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
DKAL+++ ++ + P Y + + K+ + L + I
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTY--NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYG 576
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
++ + +G+ A+ DQM E G ++++ N L+ RS +P ++ + K
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS---GDMPKAYEYLSKM 633
Query: 162 YN--LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA 219
+ + PD SY L+ + + +KA L+NEME +G++ +TY +LN +G
Sbjct: 634 ISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKM 693
Query: 220 EEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPD 271
+EAE++ +M + G++ D A Y+ I D +KE DEM GL PD
Sbjct: 694 QEAEQVLRKMIEIGINPDGATYSSLINGHVSQD--NMKEAFRFHDEMLQRGLVPD 746
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 115/220 (52%), Gaps = 2/220 (0%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A F+ M +G V ++ L+ +S++ D+ LF E+ +K N+ PD ++Y L+
Sbjct: 571 AQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK-NMVPDTVTYSSLV 629
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
C SG +L++EM ++G +TY ++++ L K G+ ++A L+++M+ +G+
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689
Query: 236 LDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
+ + + + GG + +E+ ++ G D YN ++ +CK +++EA +
Sbjct: 690 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTM 749
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
+EENGC PNA TF I L DKA K+ ++ +
Sbjct: 750 LSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMI 789
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 134/276 (48%), Gaps = 5/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI + G A++ ++D T +V ++ ++ A + +L + LF E+ K
Sbjct: 418 LINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK- 476
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+S D ++Y L+ C G +A+ LLNEM K + TYT +++ L K+G +EA
Sbjct: 477 GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEA 536
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ + + M K V DV YN + N Y + ++ + + + M G+ PD +Y L+
Sbjct: 537 KSVLAVMLKACVKPDVFTYNT-LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 595
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
+CK++M+DEA +++ + + P+ T+ + + LC SG + + E +
Sbjct: 596 GFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPA 655
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPN 375
D T L++GL K + +A + +K + PN
Sbjct: 656 DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPN 691
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 2/267 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + G+ G A M + V ++N L+ K +F+ +
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAM-SLM 581
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
++PD +Y +L+ C S D+AL L EM K + TVTY+++++ L K G
Sbjct: 582 GVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYV 641
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L EM +G DV YN I G ++ L ++M+D G++P+T ++ L+
Sbjct: 642 WDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDG 701
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK + +A++V++ L G + + IY C G ++A + + IP+
Sbjct: 702 LCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPN 761
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI 368
T +++ L KK + +A+ ++R +
Sbjct: 762 AVTFDIIINALFKKDENDKAEKLLRQM 788
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + + D A+ F +M P +I FN +L + + + Y L + K
Sbjct: 279 MINGFCKIKRVDKALNLFKEMILSRFP-PIIQFNKILDSFAKMKHYSTAVSLSHRLELK- 336
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD + +L+ C G +L ++ +G +TVT T++ L +G ++A
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
++ +G L+ +Y I GD +L+ ++ KP+ Y+ ++
Sbjct: 397 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDA 456
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
CK +++ EA ++ + G S + T+ T IY C G +A + E V+ PD
Sbjct: 457 LCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPD 516
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
T +LV+ L K+ K+KEAK V+ + K
Sbjct: 517 VRTYTILVDALGKEGKVKEAKSVLAVMLK 545
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 11/254 (4%)
Query: 127 GTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G P ++ N L+ C + ++ + + + + + L +++SY L+ C G +
Sbjct: 58 GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQL--NQVSYATLINGVCRIGDTR 115
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A++ L +++ + + Y T+++ L K EA L+SEM KG+ +V Y+ I
Sbjct: 116 AAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLI 175
Query: 246 TNTYG----GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEEN 301
YG G + L++ M + P+ +YN L+ CK + EAK V + +
Sbjct: 176 ---YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKA 232
Query: 302 GCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
N T+ T + KA VF ++ PD ++ +++ G K K++ +A
Sbjct: 233 CVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKA 292
Query: 362 KGVIR-TIKKKFPP 374
+ + I +FPP
Sbjct: 293 LNLFKEMILSRFPP 306
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
D+AL+++ + + P + Y+ V L KS R S + LI+ ++ +
Sbjct: 604 DEALNLFKEMHQKNMVPDTVTYSS--LVDGLCKSGRISYVWDLIDEMRDRGQPADVITYN 661
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + G D A+ F++M + G + +F LL C RL D + D + K
Sbjct: 662 SLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK 721
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
Y+L D Y +++ HC G ++AL +L++ME G VT+ ++N L+K+ +
Sbjct: 722 GYHL--DVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDEND 779
Query: 221 EAERLWSEMEKKGV 234
+AE+L +M +G+
Sbjct: 780 KAEKLLRQMIARGL 793
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 187 ALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT 246
+L +L ++ +G TVT T++ L +G +EA ++ +G L+ +Y I
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 247 NTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
GD + + ++ KP+ YN ++ CK +++ EA ++ + G S
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
N T+ T IY C G +A + V+ P+ T +LV+ L K+ K+KEAK V+
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226
Query: 366 RTIKK 370
+ K
Sbjct: 227 AVMLK 231
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 39 FDPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEP 98
++ KA +++++S +P Y + + KSK + L + +
Sbjct: 566 YEVKKAQHVFNAMSLMGVTPDVHTYT--ILINGFCKSKMVDEALNLFKEMHQKNMVPDTV 623
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
+L+ ++G + D+M + G P VI++N+L+ ++ DK LF+++
Sbjct: 624 TYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKM 683
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + P+ ++ +LL C G A E+ ++ KG + Y ++ KQG
Sbjct: 684 -KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGL 742
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGL 268
EEA + S+ME+ G + +++ I + D ++ ++L+ +M GL
Sbjct: 743 LEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 7/276 (2%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDE-IPKKYNLSPDKISYGLL 174
A F+ M +G V S+N ++ + + DK LF E I ++ P I + +
Sbjct: 257 AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRF---PPIIQFNKI 313
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
L S A+ L + +E KG++ T ++NC G + +++ K+G
Sbjct: 314 LDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGY 373
Query: 235 DLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKK 293
N I G ++ D++ G + + +SY L+ CK A K
Sbjct: 374 PPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433
Query: 294 VYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLV 353
+ ++ PN + T I LC +AY +F E + D T L+ G
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 493
Query: 354 KKKKIKEAKGVIR-TIKKKFPPNVLRAWKKVEEELG 388
K+KEA G++ + K P+V R + + + LG
Sbjct: 494 IVGKLKEAIGLLNEMVLKTINPDV-RTYTILVDALG 528
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
P+ Y ++ + C +A L +EM KG+ VTY+T++ G +EA L
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGL 190
Query: 226 WSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
+ M K ++ +V YN+ + G + K ++ M A +K + I+Y+ LM Y
Sbjct: 191 LNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFL 250
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNT 344
+ +A+ V+ + G +P+ ++ I C DKA +FKE ++ P
Sbjct: 251 VYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF 310
Query: 345 VKLL 348
K+L
Sbjct: 311 NKIL 314
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 119/234 (50%), Gaps = 3/234 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESV 334
C E M EA+ + + + + +P + + F I C SGN D A V K +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMI 318
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D +R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKIS------------------------------------YGLLLKSHCDSGSSDK 186
L+P S YG L+++ C +G DK
Sbjct: 286 -LAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +Y L+ K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVBSEKSAYISLVQSXLKKNEPXDAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 146/308 (47%), Gaps = 14/308 (4%)
Query: 76 KRFSDIETLIESHKNDPKITQEPY-LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVIS 134
+++ ++ +I+ +P P L ++R G A M A+ F Q+ + +
Sbjct: 137 EQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQA 196
Query: 135 FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEM 194
+N+++ Y+KV L++E+ + + PD ++Y L+ + C G D A++LLNEM
Sbjct: 197 YNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEM 256
Query: 195 ENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPE 254
++ G++ TT YT ++ +K + A L+ EM + DV Y I G
Sbjct: 257 KDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGL--GKAG 314
Query: 255 RLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFR 311
R+ E EM+ G +PDTI N ++ K +D+A K+++ + C P+ T+
Sbjct: 315 RIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYN 374
Query: 312 TWIYHLCGS----GNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRT 367
T I L S ++ KES + P T +L++G K ++++A ++
Sbjct: 375 TIIKALFESKSRASEVPSWFERMKESGIS---PSSFTYSILIDGFCKTNRMEKAMMLLEE 431
Query: 368 IKKK-FPP 374
+ +K FPP
Sbjct: 432 MDEKGFPP 439
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 40 DPDKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D AL ++ + Y P Y + +R L K+ R + + +
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFTYTE--LIRGLGKAGRIDEAYHFFYEMQREGCRPDTIV 337
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSR-LYDKVPILFDEI 158
+ N+I G+AG D AM+ F +M L SV+++N ++ A S+ +VP F+ +
Sbjct: 338 MNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERM 397
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K+ +SP +Y +L+ C + +KA+ LL EM+ KG Y ++++ L K
Sbjct: 398 -KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISY 275
+ A L+ E+++ Y V I + G RL + I DEM G PD +Y
Sbjct: 457 YDLACELFQELKENCGSSSSRVYAVMIKHL--GKAGRLDDAINMFDEMNKLGCAPDVYAY 514
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
N LM+ + M+DEA ++E+GC P+ ++
Sbjct: 515 NALMSGLARTGMLDEALSTMRRMQEHGCIPDINSY 549
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 124/305 (40%), Gaps = 38/305 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++ + G D A++ ++M + G + + L+ + LF+E+ +Y
Sbjct: 236 LISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQY 295
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
PD +Y L++ +G D+A EM+ +G T+ ++N L K G ++A
Sbjct: 296 -CRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDA 354
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP---------ERLKE--------------- 258
+L+ EM V YN I + ER+KE
Sbjct: 355 MKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 414
Query: 259 -------------LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
L++EM + G P +Y L+ K + D A ++++ L+EN S
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVI 365
++ + I HL +G D A +F E + PD L+ GL + + EA +
Sbjct: 475 SSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 534
Query: 366 RTIKK 370
R +++
Sbjct: 535 RRMQE 539
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 38/312 (12%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
++R A + H ++M G P ++++F+ L+ R+ L+++V + ++ ++
Sbjct: 223 VLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQM-AEH 281
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+PD Y ++ C + A +LN M + G+ V Y T+L L EEA
Sbjct: 282 GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEA 341
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
E L +EM K LD +N+ + G +R+ E++++M + G PD I+Y ++
Sbjct: 342 EGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVING 401
Query: 282 YCKNEMMDEA-----------------------------------KKVYEGLEENGCSPN 306
+CK ++DEA +++ + + GC PN
Sbjct: 402 FCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPN 461
Query: 307 ATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIR 366
TF T I LC G ++A ++ K+ ++ PD + +++GL K EA ++
Sbjct: 462 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLN 521
Query: 367 T-IKKKFPPNVL 377
+KK PN +
Sbjct: 522 VMVKKGMSPNTI 533
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ Q G+ D + +QM E G VI++ ++ + L D+ +L +
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM-AAC 421
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +SY ++LK C + A EL+++M +G VT+ T++N L K+G E+A
Sbjct: 422 GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 481
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNT-YGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
L +M G D+ +Y+ I G+ + EL++ M G+ P+TI Y+ + +
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASA 541
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+++ +++E +++ +A + I LC G D+A + V +P+
Sbjct: 542 LSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPN 601
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
+T +L+ GL + +KEA+ ++ + K
Sbjct: 602 ESTYTILIRGLASEGFVKEAQEILTELCSK 631
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 164 LSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAE 223
++P+ +Y L+++ C G AL +L++M +G T Y L + A
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 224 RLWSEMEKKGVDLDVAAYNVRITNTYGGDP--ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ ++ +G LDV N+ + P E ++ L D + G +PD +SYN ++
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
C + + E + GC PN TF T I HLC +G F++ ++V + PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+++G+ K+++++ A+G++ R PNV+
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVV 323
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 120 FDQMDELGTPRSVISFNALL-FACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSH 178
QM + G P + ++FN L+ F C + + + +L + SPD ISY ++
Sbjct: 450 MSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVN--GCSPDLISYSTVIDGL 507
Query: 179 CDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
+G++D+ALELLN M KG+ T+ Y+++ + L +G + +++ ++ V D
Sbjct: 508 GKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDA 567
Query: 239 AAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
YN I++ G+ +R E + M +G P+ +Y L+ + EA+++
Sbjct: 568 VLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTE 627
Query: 298 LEENG 302
L G
Sbjct: 628 LCSKG 632
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G+ A+ F +M G + +++NAL+ +R ++ + + +
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN- 419
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
SP+ ++Y ++K +C G KA+ ++N M +G VTY T++ GN A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
R+ M G D +Y I E L +EM D GL P+ ++Y L+
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YCK+E +D A + E ++ +GC PN T+ I+ L NF A ++ K + P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
T +++GL K A + + I++ PN+L
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 636
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 13/281 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
+I+ Y G AM + M + G +++++N ++ C + IL ++ +
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL--DLMRD 488
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
PD+ SY L+ C + A L NEM + G+ VTYT +++ K +
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548
Query: 222 AERLWSEMEKKGVDLDVAAYNVRI-----TNTYGGDPERLKELIDEMRDAGLKPDTISYN 276
A L M++ G +V YNV I N + G E K +I+E G+ P+ ++Y
Sbjct: 549 ATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE----GIFPNVVTYT 604
Query: 277 FLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMV 336
++ CKN A +++ + E GC PN T+ + I L G ++A +F E
Sbjct: 605 AMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERH 664
Query: 337 HKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNV 376
IPD T ++E + K++ A + R IK P +
Sbjct: 665 GLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 39/286 (13%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
L+ + GM M + +M G +++ +NA++ A C + D I+ +
Sbjct: 186 LLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE 245
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNA-- 219
+SPD +Y ++ HC D AL++ N+M +G E TVTY+T++N L G
Sbjct: 246 --MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNE 303
Query: 220 ---------------------------------EEAERLWSEMEKKGVDLDVAAYNVRIT 246
E+A RL+ +M+ KG + +V Y I+
Sbjct: 304 AFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALIS 363
Query: 247 N-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
G + L M G+ P+T++YN L+ +N + A V + NGCSP
Sbjct: 364 GLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423
Query: 306 NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEG 351
N T+ I C G+ KA V + + T +++G
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 3/276 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +G + A +M G + + + A Y+ LF ++ K
Sbjct: 291 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK- 349
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
P+ +Y L+ C SG A+ L + M GV TVTY ++N L + + A
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + M + G ++ YN I GDP++ +++ M G + ++YN ++
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC + A ++ + + + GC P+ ++ I C + A+ +F E V P+
Sbjct: 470 YCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPN 529
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNV 376
T L++G K +K+ A ++ +K+ PNV
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 142/340 (41%), Gaps = 28/340 (8%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQ--DLTVRRLAKSKRFSDIETLIESHKNDPKITQEPY 99
D+ LD +S+ +H Q ++ + L K FS E L + +
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Query: 100 LCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIP 159
+I + G A+ F++M E G +++++++L+ A + ++ LF E+
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL- 661
Query: 160 KKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL--------- 210
+++ L PD+I+Y +++++ SG + A L M G + T TY ++
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 721
Query: 211 -------------NCL--YKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPE 254
NC Y+ + + + +++ + L V N ++N + G
Sbjct: 722 ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 781
Query: 255 RLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI 314
EL+ M GL PD +YN L+ + +D A V++ + GC + ++ I
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELI 841
Query: 315 YHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVK 354
LC +A F+ +M PD +L++GL++
Sbjct: 842 CALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLR 881
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI Y + D A + M G +V ++N L+ T+ + L + ++
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE- 594
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P+ ++Y ++ C +GS+ ALE+ N+M +G +TY++++ L ++G EEA
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
E L++E+E+ G+ D Y V++ Y G E + M AG +P +Y L+
Sbjct: 655 ENLFAELERHGLIPDEITY-VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
L+KS + + + L+ + G+ + Y+ +L L + G + M +G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 234 VDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
V ++ YN I G+ + ++ ++ ++ + PDT +Y ++ +C+ +D A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+V+ + + GC PN T+ T I LC SG ++A+ + +E ++ +P +T + L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Query: 353 VKKKKIKEAKGVIRTIKKK-FPPNV 376
++A + +K K PNV
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNV 355
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 101/225 (44%), Gaps = 3/225 (1%)
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
F ++ + L +Y LL G + ++ + M ++GV+ + Y V+N L
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTI 273
K GN +AE + ++ + + D Y I + D + ++ ++M G +P+T+
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 274 SYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKES 333
+Y+ L+ C + ++EA + + +G P A T I LC G ++ A+++F +
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346
Query: 334 VMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK--FPPNV 376
P+ T L+ GL +K A G+ + + FP V
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 9/273 (3%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
YLC + G + A F QM E G ++++N+L+ + L D+ +F+++
Sbjct: 264 YLC-------KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGN 218
K + PD I+Y L+ C KA E L+EM+ G++ VTY+T ++ K+G
Sbjct: 317 -KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRI-TNTYGGDPERLKELIDEMRDAGLKPDTISYNF 277
+EA + + +M + + + Y I N G+ +L++E+ AG+K + ++Y
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
L+ C+ M EA++V+ + G +PN T+ ++ + + A + KE
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495
Query: 338 KIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKK 370
PD ++ GL + +++EAK +I IK+
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKE 528
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 138/290 (47%), Gaps = 8/290 (2%)
Query: 93 KITQEPYLCN-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALL-FACTRSRLYDK 150
++ +P CN L+ + G D + + F M G RSV ++N ++ + C L +
Sbjct: 215 RVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL-EM 273
Query: 151 VPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVL 210
LF ++ K+ +PD ++Y L+ H G D+ + + +M++ + +TY ++
Sbjct: 274 ARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALI 332
Query: 211 NCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGL 268
NC K +A EM+ G+ +V Y+ I G E +K +D MR L
Sbjct: 333 NCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD-MRRVAL 391
Query: 269 KPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYK 328
P+ +Y L+ CK + EA K+ E + + G N T+ + LC G +A +
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451
Query: 329 VFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK-FPPNVL 377
VF+ + P+ T LV G +K K+++ AK +++ +K+K P++L
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 501
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 11/258 (4%)
Query: 119 TFDQMDELGTPRSVIS-----FNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGL 173
++D D L R+V F+AL A + ++ F ++ +K+ + P S
Sbjct: 167 SWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKM-RKFRVFPKPRSCNA 225
Query: 174 LLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKG 233
LL G D + + +M G++ + TY +++ L K+G+ E A L+++M++ G
Sbjct: 226 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 285
Query: 234 VDLDVAAYNVRITNTYGGDPERLKELI---DEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
D+ YN I G L E I ++M+DA PD I+YN L+ C+CK E M +
Sbjct: 286 FTPDIVTYNSLIDGH--GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPK 343
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A + ++ NG PN T+ T+I C G +A K F + V P+ T L++
Sbjct: 344 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 403
Query: 351 GLVKKKKIKEAKGVIRTI 368
K + EA ++ I
Sbjct: 404 ANCKAGNLAEALKLVEEI 421
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 13/316 (4%)
Query: 72 LAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRS 131
L + R + E + + N + L+ + +A ++A +M E
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 499
Query: 132 VISFNALLFA-CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALEL 190
++ + +L+ C SRL ++ +L EI K+ ++ + + Y L+ ++ SG + +AL L
Sbjct: 500 LLLYGTILWGLCNESRL-EEAKLLIGEI-KESGINTNAVIYTTLMDAYFKSGQATEALTL 557
Query: 191 LNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG 250
L EM + G+ T VTY +++ L K G +EA + M + G+ +VA Y +
Sbjct: 558 LEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617
Query: 251 GDP-ERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATT 309
+ E K+L DEM D G+ PD I+Y L+ K+ + EA + + + E G +
Sbjct: 618 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHA 677
Query: 310 FRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA-------- 361
+ I+ L SG KA + E + +PD L++ K+ EA
Sbjct: 678 YTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMA 737
Query: 362 -KGVIRTIKKKFPPNV 376
+G+I + P+V
Sbjct: 738 KRGMITGLSDHAVPSV 753
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 4/262 (1%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPK 160
+LI + +AG A++ +++ + G +V+++ ALL C R+ + + +
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML-- 457
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
++P++ +Y L+ + + A ++L EM+ K ++ + Y T+L L + E
Sbjct: 458 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 517
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPDTISYNFLM 279
EA+ L E+++ G++ + Y + + G L++EM D GL ++Y L+
Sbjct: 518 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALI 577
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI 339
CK+ ++ EA + + E G PN + + LC + F+ A K+F E + +
Sbjct: 578 DGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMM 637
Query: 340 PDFNTVKLLVEGLVKKKKIKEA 361
PD L++G +K ++EA
Sbjct: 638 PDKIAYTALIDGNMKHGNLQEA 659
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 133/333 (39%), Gaps = 74/333 (22%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-------------------- 141
+LI +G+ G+ D + F+QM + VI++NAL+
Sbjct: 295 SLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354
Query: 142 ----------------CTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
C L + + D ++ L+P++ +Y L+ ++C +G+
Sbjct: 355 GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD--MRRVALTPNEFTYTSLIDANCKAGNLA 412
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
+AL+L+ E+ G+++ VTYT +L+ L ++G +EAE ++ M GV + Y +
Sbjct: 413 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472
Query: 246 TN---------------------------TYGG------DPERLKE---LIDEMRDAGLK 269
YG + RL+E LI E++++G+
Sbjct: 473 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGIN 532
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
+ + Y LM Y K+ EA + E + + G T+ I LC SG +A
Sbjct: 533 TNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHH 592
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAK 362
F + P+ LV+GL K + AK
Sbjct: 593 FGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAK 625
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 147/312 (47%), Gaps = 6/312 (1%)
Query: 67 LTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDEL 126
+ V L K+ R S +L+ + + D +LI +Y + A++ F +M E+
Sbjct: 149 VIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEV 208
Query: 127 GTPRSVISFNALLFACTRSRL-YDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGS-S 184
G ++I++NA+L + + + K+ L ++ K + L+PD +Y L+ S C +GS
Sbjct: 209 GCEPTLITYNAILNVYGKMGMPWAKIIALVQDM-KCHGLAPDLCTYNTLI-SCCRAGSLY 266
Query: 185 DKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVR 244
++AL+L E++ G VTY +L+ K +EA + +ME V YN
Sbjct: 267 EEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSL 326
Query: 245 ITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGC 303
++ GG E L +M D G+KPD +Y L++ + + A +V+E + + GC
Sbjct: 327 VSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGC 386
Query: 304 SPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKG 363
PN TF I G F++ KVFKE + PD T L+ + E G
Sbjct: 387 KPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSG 446
Query: 364 VIRTIKK-KFPP 374
V +K+ +F P
Sbjct: 447 VFEEMKRSRFAP 458
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 149/354 (42%), Gaps = 50/354 (14%)
Query: 79 SDIETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
S++ + E K + LI +YG+ G FD AM + +M E G + ++NA+
Sbjct: 442 SEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAV 501
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L R L+++ + E+ K P++++Y LL ++ + ++ L E+ +
Sbjct: 502 LATLARGGLWEQSEKVLAEM-KDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGT 560
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-------- 250
++ V T++ K E ER + E K+G+ DV N ++ YG
Sbjct: 561 IKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLS-IYGRKKMVPKA 619
Query: 251 -----------------------------GDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ + +++ E+ D G++PD ISYN ++
Sbjct: 620 NEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYA 679
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
YC+N+MMDEAK++ E ++ P+ T+ T+I F +A V + + P+
Sbjct: 680 YCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPN 739
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTI-----------KKKFPPNVLRAWKKVE 384
NT +V+ K K EA ++ + K + + + W +V+
Sbjct: 740 HNTYNSIVDWYCKLKLRDEACSFVQNLGDLDPQISEDEKSRLLERIAKKWSQVD 793
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 11/279 (3%)
Query: 98 PYLC--NLIRSYGQAG-MFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPIL 154
P LC N + S +AG +++ A+ F+++ G +++NALL +SR + +
Sbjct: 248 PDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEV 307
Query: 155 FDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY 214
++ + P ++Y L+ ++ G + AL L +M +KG++ TYTT+L+
Sbjct: 308 LKQMESN-SFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFV 366
Query: 215 KQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG--GDPERLKELIDEMRDAGLKPDT 272
G E A ++ EM K G ++ +N I YG G E + ++ E++ PD
Sbjct: 367 NAGKEELAMEVFEEMRKVGCKPNICTFNALI-KMYGDRGKFEEMVKVFKEIKVCKCSPDI 425
Query: 273 ISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWI--YHLCGSGNFDKAYKVF 330
+++N L+ + +N M E V+E ++ + +P TF T I Y CGS FD+A +
Sbjct: 426 VTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGS--FDQAMAAY 483
Query: 331 KESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIK 369
K + PD +T ++ L + ++++ V+ +K
Sbjct: 484 KRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMK 522
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 156/337 (46%), Gaps = 43/337 (12%)
Query: 82 ETLIESHKNDPKITQEPYLCN---LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNAL 138
E +E + K+ +P +C LI+ YG G F+ ++ F ++ ++++N L
Sbjct: 372 ELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTL 431
Query: 139 LFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKG 198
L ++ + +V +F+E+ K+ +P++ ++ L+ ++ GS D+A+ M G
Sbjct: 432 LAVFGQNGMDSEVSGVFEEM-KRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAG 490
Query: 199 VEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERL 256
V TY VL L + G E++E++ +EM+ G + Y+ + + Y G + ER+
Sbjct: 491 VSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYS-SLLHAYANGREVERM 549
Query: 257 KELIDEM-----------------------------------RDAGLKPDTISYNFLMTC 281
L +E+ R G+ PD + N +++
Sbjct: 550 NALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSI 609
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
Y + +M+ +A ++ + E+G + + T++ + +Y + NF K+ ++F+E + PD
Sbjct: 610 YGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPD 669
Query: 342 FNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNVL 377
+ +++ + + EAK +I +K P P+V+
Sbjct: 670 VISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVV 706
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 110/250 (44%), Gaps = 39/250 (15%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ YG++ AM QM+ SV+++N+L+ A R L + +L ++ K
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDK- 349
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y LL ++G + A+E+ EM G + T+ ++ +G EE
Sbjct: 350 GIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEM 409
Query: 223 ERLWSEME-------------------KKGVDLDVAA----------------YNVRITN 247
+++ E++ + G+D +V+ +N I+
Sbjct: 410 VKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLIS- 468
Query: 248 TYG--GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSP 305
YG G ++ M +AG+ PD +YN ++ + + ++++KV +++ GC P
Sbjct: 469 AYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKP 528
Query: 306 NATTFRTWIY 315
N T+ + ++
Sbjct: 529 NEVTYSSLLH 538
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 165/348 (47%), Gaps = 22/348 (6%)
Query: 25 SISVSKAKSKLRSEFDPDKALDIY-SSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIET 83
S+S + L++E P AL+++ ++V + SP S+ + L RR+A
Sbjct: 7 SLSPHRLLKLLKAEKSPLSALNVFDAAVRRPGFSPSSAVFHHIL--RRVAADP------G 58
Query: 84 LIESHKNDPKITQ-------EPYLCNLIRSYGQAGMFDHAMRTFDQMDEL-GTPRSVISF 135
L+ +H P+I E L+++Y + M + A+ F M + G ++ SF
Sbjct: 59 LLLAHA--PRIIAAIHCPCPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSF 116
Query: 136 NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEME 195
N LL A S + + F + +SP+ +Y +L+K C G +K LL M
Sbjct: 117 NTLLNAFVESHQWARAENFFKYF-EAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMW 175
Query: 196 NKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPE 254
G+ +TY T++ + K G+ A ++ EM ++GV+ DV YN+ I + GD
Sbjct: 176 GAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFV 235
Query: 255 RLKELIDE-MRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTW 313
+ E+ + +R+ + P +SYN +++ CK E +++E +++N + T+
Sbjct: 236 KAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSAL 295
Query: 314 IYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEA 361
I+ L +G+ A KV++E V PD T ++ GL K ++E
Sbjct: 296 IHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEEC 343
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 167/388 (43%), Gaps = 75/388 (19%)
Query: 61 SRYAQDLTVRRLAKSKRFSD-IETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRT 119
S + ++ + L K RFS+ +E KN+ K Y LI +AG A +
Sbjct: 253 SVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTY-SALIHGLSEAGDLGGARKV 311
Query: 120 FDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK-------KYN--------- 163
+++M G V++ NA+L ++ ++ L++E+ K YN
Sbjct: 312 YEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFEN 371
Query: 164 -------------LSPDKISYGLLLKSHCDSGSSDKALELLNEMENK--GVEVTTVTYTT 208
L D +YG+++ C +G ++AL++L E E++ G++V Y++
Sbjct: 372 GKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSS 431
Query: 209 VLNCLYKQGNAEEAE-----------------------------------RLWSEMEKKG 233
++N L K+G +EA+ +++ EM KG
Sbjct: 432 LINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKG 491
Query: 234 VDLDVAAYNVRITNTYGGDPERLKE---LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDE 290
L V +YN+ I ER +E ++EM + G KPD I+Y+ L+ ++ MMD
Sbjct: 492 CSLTVVSYNILINGLL--RAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDA 549
Query: 291 AKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVE 350
A +++ + G P+ + I+ LC SG + A +++ ++ K + T ++E
Sbjct: 550 ALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYS-TLRQKKCVNLVTHNTIME 608
Query: 351 GLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
G K + A + ++ + P+++
Sbjct: 609 GFYKVGNCEMASKIWAHILEDELQPDII 636
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 130/272 (47%), Gaps = 8/272 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI ++G A+ FD+M E G V+ +N ++ + + K +++ + ++
Sbjct: 189 LIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREE 248
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P +SY +++ C G + LE+ M+ + TY+ +++ L + G+ A
Sbjct: 249 LVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGA 308
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTC 281
+++ EM +GV DV N + G+ E EL +EM L+ + SYN +
Sbjct: 309 RKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKG 367
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+N +D+A +++GL E ++ T+ ++ LC +G ++A +V +E+ D
Sbjct: 368 LFENGKVDDAMMLWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMD 423
Query: 342 FNTVKL--LVEGLVKKKKIKEAKGVIRTIKKK 371
+ L+ L K+ ++ EA GV+ + K+
Sbjct: 424 VDEFAYSSLINALCKEGRLDEADGVVELMNKR 455
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 42 DKALDIYSSVSKHYASPVSSRYAQDLTVRRLAKSKRFSDIETLIESHKNDPKITQEPYLC 101
++AL + +A + L K R + + ++E N ++C
Sbjct: 406 NRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVEL-MNKRGCKFNSHVC 464
Query: 102 N-LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPK 160
N LI + + D A++ F +M G +V+S+N L+ R+ + + +E+ +
Sbjct: 465 NVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLE 524
Query: 161 KYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAE 220
K PD I+Y L+ +S D AL L ++ + G + + Y V++ L G E
Sbjct: 525 K-GWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVE 583
Query: 221 EAERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLM 279
+A +L+S + +K +++ +N + Y G+ E ++ + + L+PD ISYN +
Sbjct: 584 DALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITL 642
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTF 310
C + +A + G P A T+
Sbjct: 643 KGLCSCGRVTDAVGFLDDALVRGFLPTAITW 673
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI +A F A ++M E G +I+++ L+ S + D L+ +
Sbjct: 502 LINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTG 561
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD I Y +++ C SG + AL+L + + K V VT+ T++ YK GN E A
Sbjct: 562 H-KPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMA 619
Query: 223 ERLWSEMEKKGVDLDVAAYNV---------RITNTYGGDPERLKELIDEMRDAGLKPDTI 273
++W+ + + + D+ +YN+ R+T+ G +D+ G P I
Sbjct: 620 SKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVG--------FLDDALVRGFLPTAI 671
Query: 274 SYNFLM 279
++N L+
Sbjct: 672 TWNILV 677
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 41/349 (11%)
Query: 67 LTVRRLAKSKRFSDI-ETLIESHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTFDQMDE 125
+ V L S +F+ + + LIE + + ++ +Y +A + A+R F++M E
Sbjct: 120 IVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGE 179
Query: 126 LGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSD 185
G V + LL+ + + FD++ +N P +Y +L + G S+
Sbjct: 180 FGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFN--PSVKTYSILTRGWGVVGDSN 237
Query: 186 KALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRI 245
A ++ +EM +G + + Y ++L L K G +EA +++ EM+ GVD D Y++ I
Sbjct: 238 NAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFI 297
Query: 246 TN---------------------------TYG---------GDPERLKELIDEMRDAGLK 269
+ TY + E +++DEM + G+
Sbjct: 298 RSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVT 357
Query: 270 PDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKV 329
PDT SYN + +C + ++ A + + ++ + C P+ T+ + L G FD+A +V
Sbjct: 358 PDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEV 417
Query: 330 FKESVMVHKIPDFNTVKLLVEGLVKKK-KIKEA-KGVIRTIKKKFPPNV 376
++ P +T +++ G KKK K++EA K I + PP +
Sbjct: 418 WESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI 466
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 7/255 (2%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L R +G G ++A + FD+M E G V+++N+LL A + D+ +F E+
Sbjct: 226 LTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSN- 284
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ PD +Y + ++S C +L + K + TY V+ L K N EEA
Sbjct: 285 GVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEA 344
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERLK---ELIDEMRDAGLKPDTISYNFLM 279
++ EM ++GV D +YN Y D + L+ M PD +YN ++
Sbjct: 345 YQILDEMIERGVTPDTWSYNA--IQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVL 402
Query: 280 TCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC-GSGNFDKAYKVFKESVMVHK 338
+ D A +V+E + + G P+ +T+ I+ C ++A K F+ +
Sbjct: 403 KLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI 462
Query: 339 IPDFNTVKLLVEGLV 353
P TV+LL + L+
Sbjct: 463 PPYIATVELLRDRLL 477
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+ I+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
C E M EA+ + + + + +P + F I C SGN D A V K + +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPT 324
Query: 341 DFNTVKLLVEGLVKKKKIKEA 361
+ +L+E K + +A
Sbjct: 325 EAGHYGVLIENFCKXGQYDKA 345
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 47/255 (18%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSP------------------------------------DKISYGLLLKSHCDSGSSDK 186
L+P + YG+L+++ C G DK
Sbjct: 286 -LAPTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDK 344
Query: 187 ALELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDV 238
A++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 345 AVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DP 403
Query: 239 AAYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEG 297
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK +
Sbjct: 404 TALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDS 463
Query: 298 LEENGCSPNATTFRT 312
+ EN P++ FR+
Sbjct: 464 MIENDHLPDSALFRS 478
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 5/277 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFA-CTRSRLYDKVPILFDEIPKK 161
LI Y A + ++G ++++FN L+ C + + D + K
Sbjct: 96 LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
Y L D+ SYG L+ C +G + AL+LL +ME V +TY+TV++ L K +
Sbjct: 156 YPL--DEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIAD 213
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITNTYG-GDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A RL+S + +G+ +DV AYN I G L+ M + PD ++N L+
Sbjct: 214 ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVD 273
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
CK + EA+ V+ + + G P+ T+ + C S N +A ++F V P
Sbjct: 274 ALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEP 333
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIK-KKFPPNV 376
D +L+ G K + EA + + I+ K PN+
Sbjct: 334 DVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNL 370
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+LI + G A++ +M+E ++I+++ ++ + RL LF + +
Sbjct: 165 SLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSR 224
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
+ D ++Y L+ C G +A LL M + T+ +++ L K+G E
Sbjct: 225 -GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVE 283
Query: 222 AERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
A+ +++ M K+G D+ YN + + +EL + M GL+PD ++YN L+
Sbjct: 284 AQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLIN 343
Query: 281 CYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP 340
YCK +M+DEA +++ + PN T+ + I LC G ++ E + P
Sbjct: 344 GYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSP 403
Query: 341 DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFPPN 375
D T + ++ K K ++A + R I + P+
Sbjct: 404 DIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPD 438
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Query: 116 AMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLL 175
A+R F + G V+++N+L+ C + + L + + N++PD ++ +L+
Sbjct: 214 ALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG-NINPDDYTFNILV 272
Query: 176 KSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVD 235
+ C G +A + M +G + VTY ++ N EA L++ M K+G++
Sbjct: 273 DALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE 332
Query: 236 LDVAAYNVRITNTYGGD-PERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKV 294
DV YNV I D + L E+R L P+ +YN L+ CK M +++
Sbjct: 333 PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQEL 392
Query: 295 YEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKI-PDFNTVKLLVEGLV 353
+ + + G SP+ T+ ++ C S ++KA +F++ +V I PDF ++VE
Sbjct: 393 VDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQ--IVQGIWPDFYMYDVIVENFC 450
Query: 354 KKKKIKEAKGVIRTI 368
K +K+K A+ ++ +
Sbjct: 451 KGEKLKIAEEALQHL 465
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 3/261 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + G A F M + G ++++NAL+ S + LF+ + K+
Sbjct: 271 LVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKR- 329
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
L PD ++Y +L+ +C D+A+ L E+ K + TY ++++ L K G
Sbjct: 330 GLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCV 389
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
+ L EM +G D+ YN+ + P E+ L ++ G+ PD Y+ ++
Sbjct: 390 QELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVEN 448
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPD 341
+CK E + A++ + L +GC PN T+ I LC +FD+A + + PD
Sbjct: 449 FCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508
Query: 342 FNTVKLLVEGLVKKKKIKEAK 362
T + ++ L ++ + +A+
Sbjct: 509 AVTFETIIGALQERNETDKAE 529
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
L+ + + A F++M + G V+++N L+ + + D+ +LF EI K
Sbjct: 306 LMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCK- 364
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
NL P+ +Y L+ C G EL++EM ++G VTY L+ K E+A
Sbjct: 365 NLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKA 424
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDPERL-KELIDEMRDAGLKPDTISYNFLMTC 281
L+ ++ +G+ D Y+V + N G+ ++ +E + + G P+ +Y ++
Sbjct: 425 ISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINA 483
Query: 282 YCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESV 334
CK+ DEA + +++N C P+A TF T I L DKA K+ E +
Sbjct: 484 LCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMI 536
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 109/259 (42%), Gaps = 37/259 (14%)
Query: 149 DKVPILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTT 208
D + F+ + +K+ P + LL + G A+ L +++ +KG+ + T T
Sbjct: 37 DDTLLSFNRMLRKHP-PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95
Query: 209 VLNCLYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITN--------------------- 247
++NC Q + A L + K G ++ +N I
Sbjct: 96 LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155
Query: 248 ------TYG---------GDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAK 292
+YG G +L+ +M + ++P+ I+Y+ ++ CK+ ++ +A
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215
Query: 293 KVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGL 352
+++ + G + + + I+ C G + +A ++ V + PD T +LV+ L
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275
Query: 353 VKKKKIKEAKGVIRTIKKK 371
K+ +I EA+GV + K+
Sbjct: 276 CKEGRIVEAQGVFAVMMKR 294
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Query: 259 LIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLC 318
L ++ G+ P + L+ CYC + A + + + G PN TF T I C
Sbjct: 77 LFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFC 136
Query: 319 GSGNFDKAYKVFKESVMVHKIP-DFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKFP-PNV 376
+G KA F+ +M P D + L+ GL K + ++A +++ +++ PN+
Sbjct: 137 INGMVSKA-MAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNL 195
Query: 377 L 377
+
Sbjct: 196 I 196
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 71/166 (42%), Gaps = 33/166 (19%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI--- 158
+LI + G D+M + G ++++N L A +S+ Y+K LF +I
Sbjct: 375 SLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQG 434
Query: 159 --PKKY----------------------------NLSPDKISYGLLLKSHCDSGSSDKAL 188
P Y P+ +Y +++ + C S D+A+
Sbjct: 435 IWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAM 494
Query: 189 ELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
LL++M++ VT+ T++ L ++ ++AE+L EM ++G+
Sbjct: 495 TLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 120/234 (51%), Gaps = 3/234 (1%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I SYG+ G+ +++ F +M+ELG R++ S+NAL R Y F+++ +
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSE- 144
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
+ P + ++ +++ SG + A +M+++ + VTY T++N Y+ EEA
Sbjct: 145 GIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEA 204
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTYGGDP-ERLKELIDEMRDAGLKPDTISYNFLMTC 281
E+ + EM+ + ++ V Y I D + L++EM+ G+KP+TI+Y+ L+
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPG 264
Query: 282 YCKNEMMDEAKKVYEGLEENGCSP-NATTFRTWIYHLCGSGNFDKAYKVFKESV 334
C E M EA+ + + + + +P + + F I C SGN D A V K +
Sbjct: 265 LCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNPDAAADVLKAMI 318
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 153 ILFDEIPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNC 212
IL D +PKK L D+ + +++ S+ G +++++ +ME GVE T +Y +
Sbjct: 67 ILLD-MPKK-GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKV 124
Query: 213 LYKQGNAEEAERLWSEMEKKGVDLDVAAYNVRITNTY-GGDPERLKELIDEMRDAGLKPD 271
+ ++G A+R +++M +G++ +NV I + G E ++M+ + PD
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 272 TISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFK 331
++YN ++ Y + + M+EA+K + ++ P T+ T I D A ++ +
Sbjct: 185 VVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 332 ESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKKF 372
E P+ T L+ GL +K+ EA+ +++ + K+
Sbjct: 245 EMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 11/240 (4%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
+I + +G + A R F+ M V+++N ++ R + ++ F E+ K
Sbjct: 156 MIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEM-KGR 214
Query: 163 NLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEA 222
N+ P ++Y L+K + D AL L+ EM+ G++ T+TY+T+L L EA
Sbjct: 215 NIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEA 274
Query: 223 ERLWSEMEKKGVDLDVAAYNVRITNTY--GGDPERLKELIDEMRDAGLKPDTISYNFLMT 280
+ EM K + + +R+ +++ G+P+ +++ M + + Y L+
Sbjct: 275 RVILKEMMDKYLAPTDNSIFMRLISSHCKSGNPDAAADVLKAMIRLSVPTEAGHYGXLIX 334
Query: 281 CYCKNEMMDEAKKVYEGLEENGC--SPNAT------TFRTWIYHLCGSGNFDKAYKVFKE 332
+CK D+A K+ + L E P +T + I +LC +G KA + ++
Sbjct: 335 NFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQ 394
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 45/254 (17%)
Query: 103 LIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKY 162
LI+ Y D A+R ++M G + I+++ LL + + ++ E+ KY
Sbjct: 226 LIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKY 285
Query: 163 NLSPDKISYGLLLKSHCDSGSSD-----------------------------------KA 187
D + L+ SHC SG+ D KA
Sbjct: 286 LAPTDNSIFMRLISSHCKSGNPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKA 345
Query: 188 LELLNEMENKGV--------EVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVA 239
++LL+++ K + + Y ++ L G A +AE L ++ K GV D
Sbjct: 346 VKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQ-DPT 404
Query: 240 AYNVRIT-NTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGL 298
A N I ++ G P+ EL+ M + + +YN L+ Y K +AK + +
Sbjct: 405 ALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSM 464
Query: 299 EENGCSPNATTFRT 312
EN P++ FR+
Sbjct: 465 IENDHLPDSALFRS 478
>gi|242078465|ref|XP_002444001.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
gi|241940351|gb|EES13496.1| hypothetical protein SORBIDRAFT_07g005650 [Sorghum bicolor]
Length = 824
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 149/319 (46%), Gaps = 9/319 (2%)
Query: 64 AQDLTVRRLAKSKRFSDIETLIE---SHKNDPKITQEPYLCNLIRSYGQAGMFDHAMRTF 120
A ++ + L K + + E ++E H + P + YL IR+Y + G A
Sbjct: 301 AYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYL---IRTYCKTGNLGKAWHHI 357
Query: 121 DQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLLLKSHCD 180
+ M G + LL + + +V + F + + L D + Y + + ++C
Sbjct: 358 EAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIVYFQKF-RDLGLHLDGVLYNITMDAYCK 416
Query: 181 SGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGVDLDVAA 240
G+ ++A++LLNEM G+ + YT ++N +G E A +++ +M K + DV
Sbjct: 417 LGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKANIKPDVVT 476
Query: 241 YNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLE 299
YN+ + + G ++ +L++ M D GL+P++++Y + C+C+ + EA+ ++ LE
Sbjct: 477 YNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIACFCREGNLSEAEVLFNILE 536
Query: 300 ENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIK 359
E G + + + SG D AY +F + D + L+ L KK++
Sbjct: 537 EKGIDNIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVE 596
Query: 360 EAKGVIR-TIKKKFPPNVL 377
EA V ++K P+V+
Sbjct: 597 EASTVCSMMLEKNAVPDVI 615
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 122/273 (44%), Gaps = 19/273 (6%)
Query: 102 NLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKK 161
+++ Y +G DHA F ++ + G +S + L+ + + ++ + + +K
Sbjct: 549 SMVCGYLYSGWTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVEEASTVCSMMLEK 608
Query: 162 YNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEE 221
N PD ISY L+ ++C A +M ++G+ + YT ++N K G +E
Sbjct: 609 -NAVPDVISYSKLISAYCQKRDMHNAHLWFLDMVDRGLS-DVIVYTVLMNGYCKVGRLQE 666
Query: 222 AERLWSEMEKKGVDLDVAAYNV--------RITNTYGGDPE-----RL----KELIDEMR 264
A L+ +M G+ DV AY V + + G + RL K L+ M+
Sbjct: 667 ACDLFVQMINLGIKPDVVAYTVLLDGHIKEALHQGWQGIAKEWRSFRLRTKHKTLLSSMK 726
Query: 265 DAGLKPDTISYNFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFD 324
D ++PD Y L+ +CK E +DEA+ +++ + G +P+ + I C G
Sbjct: 727 DMEIEPDVTCYTVLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALINGYCSQGEIA 786
Query: 325 KAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKK 357
KA + +E PD T +L + ++ +K
Sbjct: 787 KAEDLLQEMTDNGMKPDVLTFSVLHQRTLRHRK 819
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 130/275 (47%), Gaps = 6/275 (2%)
Query: 106 SYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEIPKKYNLS 165
+Y + G + A++ ++M G I + L+ + +F+++ K N+
Sbjct: 413 AYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLKA-NIK 471
Query: 166 PDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERL 225
PD ++Y +L + +G+ K +LL M ++G+E ++TY + C ++GN EAE L
Sbjct: 472 PDVVTYNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSLTYGVAIACFCREGNLSEAEVL 531
Query: 226 WSEMEKKGVD-LDVAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISYNFLMTCYCK 284
++ +E+KG+D ++V ++ Y G + L + G D +S + L+ C
Sbjct: 532 FNILEEKGIDNIEVLYSSMVCGYLYSGWTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCI 591
Query: 285 NEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHK-IPDFN 343
++ ++EA V + E P+ ++ I C + A+ F + MV + + D
Sbjct: 592 DKKVEEASTVCSMMLEKNAVPDVISYSKLISAYCQKRDMHNAHLWFLD--MVDRGLSDVI 649
Query: 344 TVKLLVEGLVKKKKIKEAKGV-IRTIKKKFPPNVL 377
+L+ G K +++EA + ++ I P+V+
Sbjct: 650 VYTVLMNGYCKVGRLQEACDLFVQMINLGIKPDVV 684
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 13/283 (4%)
Query: 105 RSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYD-------KVPILFDE 157
RS+ +A D A + + +M E+G V +++ + YD + +L +
Sbjct: 231 RSFFEANKADEAFQVWVRMIEMGVKPDVHGYSSFIIGLCECGKYDLAYNMVSRYAVLHEI 290
Query: 158 IPKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQG 217
I ++ ++ + I+Y +++ C ++A ++L G Y+ ++ K G
Sbjct: 291 IQER--VAVESIAYNMVIDGLCKEMKLEEAEKVLEIKTRHGSTPDLYGYSYLIRTYCKTG 348
Query: 218 NAEEAERLWSEMEKKGVDLD--VAAYNVRITNTYGGDPERLKELIDEMRDAGLKPDTISY 275
N +A M G++++ + Y ++ G E + + RD GL D + Y
Sbjct: 349 NLGKAWHHIEAMVSHGIEINCYIVGYLLQCLKKLGMVSEVIV-YFQKFRDLGLHLDGVLY 407
Query: 276 NFLMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVM 335
N M YCK M+EA K+ + G P+ + I C G + A++VF++ +
Sbjct: 408 NITMDAYCKLGNMNEAVKLLNEMMAGGLVPDKIHYTCLINGYCLKGETENAWQVFEQMLK 467
Query: 336 VHKIPDFNTVKLLVEGLVKKKKIKEAKGVI-RTIKKKFPPNVL 377
+ PD T +L G + + + ++ + + PN L
Sbjct: 468 ANIKPDVVTYNILASGYSRNGAVIKVYDLLEHMVDQGLEPNSL 510
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 19/315 (6%)
Query: 59 VSSRYAQDLTVRRLAKSKRFSDIETLIE--SHKNDPKITQEPYLCNLIRSYGQAGMFDHA 116
V+ Y +D + L FS +I+ SH K+ + C ++ S G G
Sbjct: 81 VAFAYFKD--INSLGFHHDFSTYSEIIQILSHSFQGKMLVALF-CEILSSTGNGG--PEI 135
Query: 117 MRTFDQMDELGTPRSVISF--NALLFACTRSRLYDKVPILFDEIPKKYNLSPDKISYGLL 174
+ D + + V+S+ N L+ A T S + +F + + P + L
Sbjct: 136 LTLIDHLSKTCATSHVLSYAVNCLIKAYTTSHDAQETVEMFCHLCR-LGFVPTLWACNFL 194
Query: 175 LKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLYKQGNAEEAERLWSEMEKKGV 234
LK SG SD + + M+ + + T + V ++ A+EA ++W M + GV
Sbjct: 195 LKFVSQSGDSDMVVRAYDRMKCFQLTLDTQSLNIVTRSFFEANKADEAFQVWVRMIEMGV 254
Query: 235 DLDVAAYNVRITNTYGGDPERLK-------ELIDEMRDAGLKPDTISYNFLMTCYCKNEM 287
DV Y+ I L ++ E+ + ++I+YN ++ CK
Sbjct: 255 KPDVHGYSSFIIGLCECGKYDLAYNMVSRYAVLHEIIQERVAVESIAYNMVIDGLCKEMK 314
Query: 288 MDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVHKIP-DFNTVK 346
++EA+KV E +G +P+ + I C +GN KA+ E+++ H I + V
Sbjct: 315 LEEAEKVLEIKTRHGSTPDLYGYSYLIRTYCKTGNLGKAWHHI-EAMVSHGIEINCYIVG 373
Query: 347 LLVEGLVKKKKIKEA 361
L++ L K + E
Sbjct: 374 YLLQCLKKLGMVSEV 388
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 140/367 (38%), Gaps = 91/367 (24%)
Query: 99 YLCNLIRSYGQAGMFDHAMRTFDQMDELGTPRSVISFNALLFACTRSRLYDKVPILFDEI 158
Y C LI Y G ++A + F+QM + V+++N L +R+ KV L + +
Sbjct: 442 YTC-LINGYCLKGETENAWQVFEQMLKANIKPDVVTYNILASGYSRNGAVIKVYDLLEHM 500
Query: 159 PKKYNLSPDKISYGLLLKSHCDSGSSDKALELLNEMENKGVEVTTVTYTTVLNCLY---- 214
+ L P+ ++YG+ + C G+ +A L N +E KG++ V Y++++ C Y
Sbjct: 501 VDQ-GLEPNSLTYGVAIACFCREGNLSEAEVLFNILEEKGIDNIEVLYSSMV-CGYLYSG 558
Query: 215 -------------KQGN-------------------AEEAERLWSEMEKKGVDLDVAAYN 242
KQGN EEA + S M +K DV +Y+
Sbjct: 559 WTDHAYTLFLRVAKQGNMVDNLSCSKLINSLCIDKKVEEASTVCSMMLEKNAVPDVISYS 618
Query: 243 VRIT---------------------------------NTYG--GDPERLKELIDEMRDAG 267
I+ N Y G + +L +M + G
Sbjct: 619 KLISAYCQKRDMHNAHLWFLDMVDRGLSDVIVYTVLMNGYCKVGRLQEACDLFVQMINLG 678
Query: 268 LKPDTISYNFLMTCYCKNEMMD----------------EAKKVYEGLEENGCSPNATTFR 311
+KPD ++Y L+ + K + + K + +++ P+ T +
Sbjct: 679 IKPDVVAYTVLLDGHIKEALHQGWQGIAKEWRSFRLRTKHKTLLSSMKDMEIEPDVTCYT 738
Query: 312 TWIYHLCGSGNFDKAYKVFKESVMVHKIPDFNTVKLLVEGLVKKKKIKEAKGVIRTIKKK 371
I C + D+A +F E + PD L+ G + +I +A+ +++ +
Sbjct: 739 VLIDGHCKTEYLDEARGLFDEMLAKGLTPDVYAYTALINGYCSQGEIAKAEDLLQEMTDN 798
Query: 372 -FPPNVL 377
P+VL
Sbjct: 799 GMKPDVL 805
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 177 SHCDSGSSDKAL--ELLNEMENKGVEVTTV------------TYTTVLNCLYK----QGN 218
SH G AL E+L+ N G E+ T+ + +NCL K +
Sbjct: 109 SHSFQGKMLVALFCEILSSTGNGGPEILTLIDHLSKTCATSHVLSYAVNCLIKAYTTSHD 168
Query: 219 AEEAERLWSEMEKKGVDLDVAAYNVRITN-TYGGDPERLKELIDEMRDAGLKPDTISYNF 277
A+E ++ + + G + A N + + GD + + D M+ L DT S N
Sbjct: 169 AQETVEMFCHLCRLGFVPTLWACNFLLKFVSQSGDSDMVVRAYDRMKCFQLTLDTQSLNI 228
Query: 278 LMTCYCKNEMMDEAKKVYEGLEENGCSPNATTFRTWIYHLCGSGNFDKAYKVFKESVMVH 337
+ + + DEA +V+ + E G P+ + ++I LC G +D AY + ++H
Sbjct: 229 VTRSFFEANKADEAFQVWVRMIEMGVKPDVHGYSSFIIGLCECGKYDLAYNMVSRYAVLH 288
Query: 338 KIPDFNTV------KLLVEGLVKKKKIKEAKGVI 365
+I ++++GL K+ K++EA+ V+
Sbjct: 289 EIIQERVAVESIAYNMVIDGLCKEMKLEEAEKVL 322
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,290,827,701
Number of Sequences: 23463169
Number of extensions: 264755329
Number of successful extensions: 970366
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6806
Number of HSP's successfully gapped in prelim test: 4817
Number of HSP's that attempted gapping in prelim test: 827190
Number of HSP's gapped (non-prelim): 61699
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)