BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015675
(403 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O08781|ZMAT3_RAT Zinc finger matrin-type protein 3 OS=Rattus norvegicus GN=Zmat3
PE=2 SV=1
Length = 289
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 41/212 (19%)
Query: 3 WCELCRVDCNTLEILEQHKNGKRHKRNLRTHADLQNLNKCIAGQQNIQMPNSGSQPEVSQ 62
+C+LC V N+ + + H GK H + LR + N C + + + P V
Sbjct: 71 FCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYA---ANSCPPPARMSSVAEPVATPLVPV 127
Query: 63 PEKVEECRE--KQPLESLPSQTLLGNASNET--------------------EMQKNTV-D 99
P +V C+ + L + L +AS + E Q ++ D
Sbjct: 128 PPQVGSCKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSHSFSD 187
Query: 100 SVKEPQRKSRDQPDSRGCGSKRKMRGGRGGKYMRTNEGGP------RRPIEPPKPKGVIP 153
S + QR++R + GS+ KM R Y + GP R+ I V P
Sbjct: 188 SAEAGQRRTRKE------GSEFKMVTTRRNMYTVQSNSGPYFNARSRQRIPRDLAMCVTP 241
Query: 154 ---LICELCNVKCESQVVFDSHLVGKKHLANV 182
C +CNV +V F HL K+H + V
Sbjct: 242 SGQFYCSMCNVGAGEEVEFRQHLESKQHKSKV 273
>sp|Q6DJ13|ZN830_XENTR Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1
Length = 357
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 154 LICELCNVKCESQVVFDSHLVGKKHLANVKRFHGHRA 190
L+C +CN++ +S++++ +H++GK+H V G +A
Sbjct: 45 LLCVVCNIQIKSELLWPAHILGKQHKEKVAELKGSKA 81
>sp|Q96PM9|Z385A_HUMAN Zinc finger protein 385A OS=Homo sapiens GN=ZNF385A PE=2 SV=1
Length = 366
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 1 MAWCELCRVDCNTLEILEQHKNGKRHKRNLRTHADL 36
+ +C LC+V N+L LE H G +HK L + L
Sbjct: 180 LLYCALCKVAVNSLSQLEAHNKGTKHKTILEARSGL 215
>sp|Q6PBT9|Z385B_DANRE Zinc finger protein 385B OS=Danio rerio GN=znf385b PE=2 SV=1
Length = 492
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 1 MAWCELCRVDCNTLEILEQHKNGKRHKRNL 30
+ +C LC+V N+L LE H G +HK L
Sbjct: 305 LLYCSLCKVAVNSLSQLEAHNTGSKHKTML 334
>sp|Q8BXJ8|Z385B_MOUSE Zinc finger protein 385B OS=Mus musculus GN=Znf385b PE=2 SV=1
Length = 482
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 1 MAWCELCRVDCNTLEILEQHKNGKRHK 27
+ +C LC+V N+L LE H G +HK
Sbjct: 296 LLYCSLCKVAVNSLSQLEAHNTGSKHK 322
>sp|O59811|YJVF_SCHPO Zinc finger protein C550.15c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1
Length = 463
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 156 CELCNVKCESQVVFDSHLVGKKHLANVKRF 185
CE+CN K S+ + SH+ KKH N+ +F
Sbjct: 72 CEVCNKKFYSEGAYSSHMASKKHRDNLSKF 101
>sp|Q8R1N0|ZN830_MOUSE Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1
Length = 363
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 154 LICELCNVKCESQVVFDSHLVGKKHLANVKRFHG 187
L C LCN +S++++ +H++GK+H V G
Sbjct: 51 LSCALCNTPVKSELLWQTHVLGKQHRERVAELKG 84
>sp|Q3MHS2|ZN830_RAT Zinc finger protein 830 OS=Rattus norvegicus GN=Znf830 PE=2 SV=1
Length = 370
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 140 RRPIEPP--KPKGVIPLICELCNVKCESQVVFDSHLVGKKHLANVKRFHG 187
R+ IE P K + L C LCN +S++++ +H++GK+H V G
Sbjct: 35 RKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELKG 84
>sp|Q569K4|Z385B_HUMAN Zinc finger protein 385B OS=Homo sapiens GN=ZNF385B PE=2 SV=1
Length = 471
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 1 MAWCELCRVDCNTLEILEQHKNGKRHK 27
+ +C LC+V N+L LE H G +HK
Sbjct: 284 LLYCSLCKVAVNSLSQLEAHNTGSKHK 310
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 1 MAWCELCRVDCNTLEILEQHKNGKRHKRNLRTHAD 35
++CE+C + N+ + H NGK H++ ++ +D
Sbjct: 33 FSFCEVCNIQLNSAAQAQVHSNGKSHRKRVKQLSD 67
>sp|Q96NB3|ZN830_HUMAN Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 PE=1 SV=2
Length = 372
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 154 LICELCNVKCESQVVFDSHLVGKKHLANVKRFHG 187
L C LCN +S++++ +H++GK+H V G
Sbjct: 51 LSCALCNTPVKSELLWQTHVLGKQHREKVAELKG 84
>sp|Q8AVN9|ZN346_XENLA Zinc finger protein 346 OS=Xenopus laevis GN=znf346 PE=1 SV=1
Length = 524
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 156 CELCNVKCESQVVFDSHLVGKKHLANVK 183
C +CN+ S VV +SH +GK H+ N++
Sbjct: 97 CPVCNMTFSSPVVAESHYIGKTHIKNLR 124
>sp|Q6P9P6|KIF11_MOUSE Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1
Length = 1052
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 188 HRALYGEAALQSLYPASFNSLSSSVITQVQQGVNDPQVV---LAQLLTYVLSQ----AQA 240
H+ L+G +L +S ++L + T ++ V+ P+ V ++Q+ +L + AQ+
Sbjct: 562 HKTLFG-----NLMSSSVSALDTITTTALESLVSIPENVSARVSQISDMILEEQSLAAQS 616
Query: 241 QAQAPGLLAEQLRGLAAQIPGLVGMVAPAPAPGSSQETQYQHDFRTQRSMATTEEGSKNT 300
++ GL+ E + L L +VAP+ + Q QH FR ++A E K
Sbjct: 617 KSVLQGLIDELVTDL---FTSLKTIVAPSVVSILNINKQLQHIFRASSTVAEKVEDQKRE 673
Query: 301 V 301
+
Sbjct: 674 I 674
>sp|O54836|ZMAT3_MOUSE Zinc finger matrin-type protein 3 OS=Mus musculus GN=Zmat3 PE=2
SV=1
Length = 290
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 82/215 (38%), Gaps = 46/215 (21%)
Query: 3 WCELCRVDCNTLEILEQHKNGKRHKRNLRTHADLQNLNKC-IAGQQNIQMPNSGSQPEVS 61
+C+LC V N+ + + H GK H + LR + N C + + + + P V
Sbjct: 71 FCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYA---ANSCPPPARVSSVVAEPVATPLVP 127
Query: 62 QPEKVEECRE--KQPLESLPSQTLLGNASNET--------------------EMQKNTV- 98
P +V C+ + L + L +AS + E Q ++
Sbjct: 128 VPPQVGSCKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSHSFS 187
Query: 99 DSVKEPQRKSRDQPDSRGCGSKRKMRGGR---------GGKYM--RTNEGGPRRPIEPPK 147
DS + QR++R + GS+ KM R G Y R+ + PR
Sbjct: 188 DSAEAGQRRTRKE------GSEFKMVATRRNMNPVQSNSGPYFNARSRQRIPRDLAMCVT 241
Query: 148 PKGVIPLICELCNVKCESQVVFDSHLVGKKHLANV 182
P G C +CNV +V F HL K+H + V
Sbjct: 242 PSGQ--FYCSMCNVGAGEEVEFRQHLESKQHKSKV 274
>sp|Q9UPR6|ZFR2_HUMAN Zinc finger RNA-binding protein 2 OS=Homo sapiens GN=ZFR2 PE=2 SV=3
Length = 939
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 117 CGSKRKMRGGRGGKYMRTNEGGPRRPIEP-PKPKGV-IPLICELCNVKCESQVVFDSHLV 174
C + R GG+ R E + ++P P+GV L C+LC V C + +H+
Sbjct: 280 CAGPQTYREHLGGQKHRKKEAAQKTGVQPNGSPRGVQAQLHCDLCAVSCTGADAYAAHIR 339
Query: 175 GKKH 178
G KH
Sbjct: 340 GSKH 343
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 4 CELCRVDCNTLEILEQHKNGKRHKRNLRTHADL 36
C+LC V C + H G +H++ + HA L
Sbjct: 321 CDLCAVSCTGADAYAAHIRGSKHQKVFKLHAKL 353
>sp|Q9UL40|ZN346_HUMAN Zinc finger protein 346 OS=Homo sapiens GN=ZNF346 PE=1 SV=1
Length = 294
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 156 CELCNVKCESQVVFDSHLVGKKHLANVK---------RFHGHRALYGEAALQSLYPASFN 206
C +CN+ S VV SH +GK H N+K H +R + SL A+FN
Sbjct: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
>sp|Q63ZM9|ZN830_XENLA Zinc finger protein 830 OS=Xenopus laevis GN=znf830 PE=2 SV=1
Length = 356
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 133 RTNEGGPRRPIEPP--KPKGVIPLICELCNVKCESQVVFDSHLVGKKHLANVKRFHGHRA 190
+ E ++ IE P K + L C +CN +S++++ +H++GK+H V G +A
Sbjct: 22 KQRESSSKKRIESPLAKYNSLGHLSCVVCNSLIKSELLWPAHILGKQHKEKVAELKGTKA 81
Query: 191 LYGEAALQSLYP 202
+ YP
Sbjct: 82 TTSSPSNTIEYP 93
>sp|Q6PR54|RIF1_MOUSE Telomere-associated protein RIF1 OS=Mus musculus GN=Rif1 PE=1 SV=2
Length = 2419
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 274 SSQETQYQHDFRTQRSMAT---TEEGSKNTVMVEAEDQQQSIATDLESPETVGIETKEKN 330
+SQ+T + F + SM + TE+ ++ +++ E + +I ++PE GI+ +N
Sbjct: 1085 ASQDTLFSAQFSQEESMESLTLTEKPKEDAKIIKEEQMESTIFIHQDAPENCGIDEHSEN 1144
Query: 331 ASLP 334
ASLP
Sbjct: 1145 ASLP 1148
>sp|Q9NXG0|CNTLN_HUMAN Centlein OS=Homo sapiens GN=CNTLN PE=2 SV=5
Length = 1405
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 2 AWCELCRVDCNTLEILEQHKNGKRHKRNLRTH-----ADLQNLNKCIAGQQNIQMPNSGS 56
W EL E++ Q N + L+ H A +Q LN+C+A ++ Q+ SG
Sbjct: 611 VWNELAYFKRENQELMIQKMNLEEELDELKVHISIDKAAIQELNRCVAERREEQLFRSGE 670
Query: 57 QPEV--SQPEK 65
EV S PEK
Sbjct: 671 DDEVKRSTPEK 681
>sp|Q9HA38|ZMAT3_HUMAN Zinc finger matrin-type protein 3 OS=Homo sapiens GN=ZMAT3 PE=1
SV=1
Length = 289
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 80/216 (37%), Gaps = 48/216 (22%)
Query: 3 WCELCRVDCNTLEILEQHKNGKRHKRNLRTHADLQNLNKCIAGQQNIQMPNSGSQPEVSQ 62
+C+LC V N+ + + H GK H + LR + N C + + + P V
Sbjct: 71 YCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYA---ANSCPPPARMSNVVEPAATPVVPV 127
Query: 63 PEKVEECRE--KQPLESLPSQTLLGNASNET--------------------EMQKNTVDS 100
P ++ + + L + L +AS + E Q N+
Sbjct: 128 PPQMGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNSFSE 187
Query: 101 VKE-PQRKSRDQPDSRGCGSKRKMRGGRGGKY-MRTNEGGPRRPIEPPKPKGVIP----- 153
E QR++R + G++ KM R Y ++ N G P P+ + IP
Sbjct: 188 SSELGQRRARKE------GNEFKMMPNRRNMYTVQNNSAG---PYFNPRSRQRIPRDLAM 238
Query: 154 -------LICELCNVKCESQVVFDSHLVGKKHLANV 182
C +CNV ++ F HL K+H + V
Sbjct: 239 CVTPSGQFYCSMCNVGAGEEMEFRQHLESKQHKSKV 274
>sp|Q9JJN2|ZFHX4_MOUSE Zinc finger homeobox protein 4 OS=Mus musculus GN=Zfhx4 PE=1 SV=1
Length = 3550
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 131 YMRTNEGGPRRPIEPPKPKGVIPLICELCNVKCESQVVFDSHLVGKKHLANVKRFHGHRA 190
Y +T + PR +G P CE+CN ++ H+ KHL NV+
Sbjct: 674 YCKTGQPHPRLARGESYTRGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNG 733
Query: 191 --LYGEAA 196
++G +A
Sbjct: 734 EQVFGHSA 741
>sp|A2AAJ9|OBSCN_MOUSE Obscurin OS=Mus musculus GN=Obscn PE=2 SV=2
Length = 8891
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 340 ISSLENPDNTASASKCEVASGGEAVQQQHGDDLVDSENEQDL 381
+ +E P+ A+ +C ++S V+ +HGDD++ S N+ L
Sbjct: 3623 LKDVEVPEGKAATLRCVLSSVAAPVEWRHGDDVLKSSNKYSL 3664
>sp|Q9H898|ZMAT4_HUMAN Zinc finger matrin-type protein 4 OS=Homo sapiens GN=ZMAT4 PE=2
SV=1
Length = 229
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 125 GGRGGKYMRTNEGGPRRPIEPPKPKGVIPLICELCNVKCESQVVFDSHLVGKKHLANVKR 184
GG K +R+ G ++ K C LCN+ S VV DSH GK H +K
Sbjct: 53 GGCPAKRLRSENGSDADMVDKNK-------CCTLCNMSFTSAVVADSHYQGKIHAKRLKL 105
Query: 185 FHG 187
G
Sbjct: 106 LLG 108
>sp|Q0VD35|ZMAT4_BOVIN Zinc finger matrin-type protein 4 OS=Bos taurus GN=ZMAT4 PE=2 SV=1
Length = 229
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 125 GGRGGKYMRTNEGGPRRPIEPPKPKGVIPLICELCNVKCESQVVFDSHLVGKKHLANVKR 184
GG K +R+ G ++ K C LCN+ S VV DSH GK H +K
Sbjct: 53 GGCPAKRLRSENGNDADMVDKNK-------CCTLCNMSFTSAVVADSHYQGKIHAKRLKL 105
Query: 185 FHGHRALYGEAA--LQSLYP 202
G + A L SL P
Sbjct: 106 LLGEKTPLKTTATPLSSLKP 125
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.126 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,700,907
Number of Sequences: 539616
Number of extensions: 6381952
Number of successful extensions: 21095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 20729
Number of HSP's gapped (non-prelim): 492
length of query: 403
length of database: 191,569,459
effective HSP length: 120
effective length of query: 283
effective length of database: 126,815,539
effective search space: 35888797537
effective search space used: 35888797537
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)