BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015679
(403 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302143319|emb|CBI21880.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/399 (74%), Positives = 338/399 (84%), Gaps = 15/399 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FVFV LP+IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 167 FVFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 226
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAFHEEE+TRNKQIQASIA+I QRQSEAL ++
Sbjct: 227 RRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQASIAQILQRQSEALNRK 286
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
RT GKD A PFMTR QRN R A+ RRR+N RG++ QGS+DNEDEND++GGK SSS +ERS
Sbjct: 287 RTLGKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSDDNEDENDNDGGKGSSSAEERS 346
Query: 197 AEVRPRRRKRRSGIRSSQPSSSA-ANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGR 255
EV+ RR KRR+GIR QPSSS+ ANSDGGCIENDLEV RESRG SPGLVWNPEMLAWGR
Sbjct: 347 TEVKRRRYKRRAGIRLIQPSSSSVANSDGGCIENDLEVNRESRGFSPGLVWNPEMLAWGR 406
Query: 256 GGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQ 315
GG RS+TRHGS+SGCN KS+RSTRL+KLV+YLRSL EN++ELDV LML+S D + PSLQ
Sbjct: 407 GGARSHTRHGSSSGCNHKSARSTRLSKLVDYLRSLGENDNELDVHLMLISLDKESTPSLQ 466
Query: 316 QPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK---ERLDAKGNQSTPI-------- 364
+PYLCC+P+LSV+ LCEYV+LQTPL+AEEVEIL+VK N ST +
Sbjct: 467 EPYLCCRPTLSVRHLCEYVALQTPLRAEEVEILVVKGCHNDYQPFPNPSTSVDDLNPDPI 526
Query: 365 ---PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
P+ D+LQILEGQETL GL+ N TS + L+LAYRQK
Sbjct: 527 VIDPSKDELQILEGQETLVGLQANGTSCRNQLVLAYRQK 565
>gi|359485403|ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 412
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 299/399 (74%), Positives = 338/399 (84%), Gaps = 15/399 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FVFV LP+IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 11 FVFVGLPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 70
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAFHEEE+TRNKQIQASIA+I QRQSEAL ++
Sbjct: 71 RRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQASIAQILQRQSEALNRK 130
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
RT GKD A PFMTR QRN R A+ RRR+N RG++ QGS+DNEDEND++GGK SSS +ERS
Sbjct: 131 RTLGKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSDDNEDENDNDGGKGSSSAEERS 190
Query: 197 AEVRPRRRKRRSGIRSSQPSSSA-ANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGR 255
EV+ RR KRR+GIR QPSSS+ ANSDGGCIENDLEV RESRG SPGLVWNPEMLAWGR
Sbjct: 191 TEVKRRRYKRRAGIRLIQPSSSSVANSDGGCIENDLEVNRESRGFSPGLVWNPEMLAWGR 250
Query: 256 GGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQ 315
GG RS+TRHGS+SGCN KS+RSTRL+KLV+YLRSL EN++ELDV LML+S D + PSLQ
Sbjct: 251 GGARSHTRHGSSSGCNHKSARSTRLSKLVDYLRSLGENDNELDVHLMLISLDKESTPSLQ 310
Query: 316 QPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK---ERLDAKGNQSTPI-------- 364
+PYLCC+P+LSV+ LCEYV+LQTPL+AEEVEIL+VK N ST +
Sbjct: 311 EPYLCCRPTLSVRHLCEYVALQTPLRAEEVEILVVKGCHNDYQPFPNPSTSVDDLNPDPI 370
Query: 365 ---PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
P+ D+LQILEGQETL GL+ N TS + L+LAYRQK
Sbjct: 371 VIDPSKDELQILEGQETLVGLQANGTSCRNQLVLAYRQK 409
>gi|224133478|ref|XP_002328052.1| predicted protein [Populus trichocarpa]
gi|222837461|gb|EEE75840.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 283/385 (73%), Positives = 321/385 (83%), Gaps = 10/385 (2%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FVFVELP+IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR+GNNECPACRTHCAS
Sbjct: 119 FVFVELPDIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCAS 178
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAFHEEE TRNKQIQASIA+I QRQSEALVKR
Sbjct: 179 RRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEMTRNKQIQASIAQIIQRQSEALVKR 238
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
RT GK++ T R RRRRNSR ++ QGSED EDENDDN GKDSSS DERS
Sbjct: 239 RTMGKESTFMTRT------RRTITRRRRNSRSSDFQGSEDIEDENDDNIGKDSSSADERS 292
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
EVR RR KRR SQPSSSA NS+GG ENDL+ RE+RG+SPGL WN EMLAWGRG
Sbjct: 293 TEVRHRRPKRR---WPSQPSSSAVNSEGGGAENDLDSNRENRGLSPGLAWNTEMLAWGRG 349
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
GTRS+TR+G+ SGCN+K+SR+TRL+KLVEYLRSL E NDELD+ L L+S Q PSLQQ
Sbjct: 350 GTRSHTRYGNPSGCNNKNSRNTRLSKLVEYLRSLDEKNDELDIHLKLISLGNQSTPSLQQ 409
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQ 376
PYLCC+PSLSVK LCEYV+ QT LQAEEVE+L++K + + + + IP D+LQIL+GQ
Sbjct: 410 PYLCCRPSLSVKHLCEYVAHQTTLQAEEVELLLIKGKAENLSAKHSQIP-MDELQILKGQ 468
Query: 377 ETLAGLRVNHTSNTDHLILAYRQKQ 401
ET+AGL+ + +S+ DHLILAYRQK+
Sbjct: 469 ETVAGLKASCSSSRDHLILAYRQKE 493
>gi|297740412|emb|CBI30594.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 315/388 (81%), Gaps = 6/388 (1%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FV V+L EIRK+VQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 49 FVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 108
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYE+EELAFHEEE+TRNKQIQASIA+ +RQSEAL ++
Sbjct: 109 RRSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRK 168
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
RT K TA+ F R Q N R RRN R T+ GSED+ED N ++GGKDSSS ++ S
Sbjct: 169 RTTAKATAAAFARRSQGNYRRG----RRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHS 224
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
AEV+P+R +R G+R SQPSS AAN+DGG ENDLE RE+ G S GLV N E+LAWG+G
Sbjct: 225 AEVKPKRSRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKG 284
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RS+TR+GS SG N K++RS+RL+KLV+YLR+L +N+DELD+ LMLVS D Q PSLQ
Sbjct: 285 GMRSHTRYGSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQT 344
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDA--KGNQSTPIPTTDQLQILE 374
PYLCC+P+LSV+ LC+YV+LQTPL A+EVEIL++KE+L N S+P P +D+LQ+LE
Sbjct: 345 PYLCCRPTLSVRHLCQYVALQTPLLADEVEILVIKEQLSKLNPSNSSSPDPCSDRLQVLE 404
Query: 375 GQETLAGLRVNHTSNTDHLILAYRQKQS 402
QETLA L+ +N HL+LAYR+K S
Sbjct: 405 AQETLAVLKTMRNANQSHLLLAYRRKLS 432
>gi|359483484|ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 534
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 315/388 (81%), Gaps = 6/388 (1%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FV V+L EIRK+VQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 150 FVIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 209
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYE+EELAFHEEE+TRNKQIQASIA+ +RQSEAL ++
Sbjct: 210 RRSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRK 269
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
RT K TA+ F R Q + R RRN R T+ GSED+ED N ++GGKDSSS ++ S
Sbjct: 270 RTTAKATAAAFARRSQ----GNYRRGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHS 325
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
AEV+P+R +R G+R SQPSS AAN+DGG ENDLE RE+ G S GLV N E+LAWG+G
Sbjct: 326 AEVKPKRSRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKG 385
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RS+TR+GS SG N K++RS+RL+KLV+YLR+L +N+DELD+ LMLVS D Q PSLQ
Sbjct: 386 GMRSHTRYGSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQT 445
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDA--KGNQSTPIPTTDQLQILE 374
PYLCC+P+LSV+ LC+YV+LQTPL A+EVEIL++KE+L N S+P P +D+LQ+LE
Sbjct: 446 PYLCCRPTLSVRHLCQYVALQTPLLADEVEILVIKEQLSKLNPSNSSSPDPCSDRLQVLE 505
Query: 375 GQETLAGLRVNHTSNTDHLILAYRQKQS 402
QETLA L+ +N HL+LAYR+K S
Sbjct: 506 AQETLAVLKTMRNANQSHLLLAYRRKLS 533
>gi|449463098|ref|XP_004149271.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 495
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/399 (67%), Positives = 309/399 (77%), Gaps = 16/399 (4%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+FVEL IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 95 FIFVELSGIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 154
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEEL FHEEER RNKQIQ SIA+IFQRQSEAL K+
Sbjct: 155 RRSLRDDPNYDALIAALYPDIDKYEEEELTFHEEERNRNKQIQESIAQIFQRQSEALSKK 214
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R GKDTA +TR +RN R HL RR+N RG E G EDN+D++D+N GKDSSS DER
Sbjct: 215 RILGKDTAGVILTRSRRNHRNVHL-RRQNGRGDEVSGYEDNDDDDDNNEGKDSSSADERF 273
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDG--GCIENDLEVGRESRGISPGLVWNPEMLAWG 254
EVR RR+KR +RSSQPSSS AN D GC E+DL++ RE+R +SPGLV N EML WG
Sbjct: 274 TEVRQRRKKRHPTVRSSQPSSSIANIDSGDGCAESDLDMSRENRTVSPGLVLNTEMLGWG 333
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
RGG RSN+RHGSA G +KSSRS+RL KL +YLR L+ENN+ELDV L+L+S D + PSL
Sbjct: 334 RGGVRSNSRHGSAGGSGNKSSRSSRLMKLAKYLRGLEENNNELDVHLLLISVDKESTPSL 393
Query: 315 QQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPI---------- 364
QQP+L C+PSL+VK L EYVS +TPLQA++VEIL +K R QSTP
Sbjct: 394 QQPHLYCRPSLTVKHLREYVSRKTPLQADDVEILSLKGRPRTSNEQSTPSASISIDGMSL 453
Query: 365 ---PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
P +LQ LEG+ LAGL+ + T + D LIL YR+K
Sbjct: 454 VFDPLKYELQSLEGEIFLAGLQSDCTYSRDLLILGYRRK 492
>gi|224125396|ref|XP_002329795.1| predicted protein [Populus trichocarpa]
gi|222870857|gb|EEF07988.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/391 (60%), Positives = 296/391 (75%), Gaps = 21/391 (5%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
+V V+L EIRK+VQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 65 YVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 124
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAF E+E+ RNK+IQA+IA+ F RQ+EAL ++
Sbjct: 125 RRSLRDDPNYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQATIAQTFDRQAEALSRK 184
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R+ K TA+ F R R AH R RRN R E QGS+DNED N GGKDSSS DE S
Sbjct: 185 RSTAKATAAVFARRTPSRFRDAHSRGRRNYRIAELQGSDDNEDAN-GGGGKDSSSTDEHS 243
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
AEV+P+R +R S+A N+DG END EV +ES G S GL+ + E LAWG+
Sbjct: 244 AEVKPKRYRR---------CSAAFNADGSGGENDSEVNKESVGASAGLISSSERLAWGKN 294
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RS+TR+GSA+G N K++R++R++KL +YLR+L EN++ELD+ LMLVS D Q PSLQ+
Sbjct: 295 GMRSHTRYGSANGSNVKNARNSRISKLADYLRNLDENDNELDINLMLVSFDEQRVPSLQR 354
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKE---RLDAKGNQSTPI-------PT 366
PYLCC+P+LS+K LC+YV+ QT LQA EVEI +V++ +LD + S+P+ P
Sbjct: 355 PYLCCRPTLSIKSLCQYVAFQTSLQANEVEIYLVQDMNSKLDFSLSMSSPVSRHGIIDPC 414
Query: 367 TDQLQILEGQETLAGLRVNHTSNTDHLILAY 397
D+LQ+LE ETL GL+ N+ + HL+ ++
Sbjct: 415 KDKLQVLEQHETLGGLKTNNCIHG-HLVSSF 444
>gi|449531613|ref|XP_004172780.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 424
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/401 (63%), Positives = 300/401 (74%), Gaps = 17/401 (4%)
Query: 15 CRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 74
C F+ + +++K GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC
Sbjct: 23 CLPAFL-INQVKKLATLLTLTGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 81
Query: 75 ASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALV 134
ASRRSLRDDPNYDALI+ALYPDIDKYEEEEL FHEEER RNKQIQ SIA+IFQRQSEAL
Sbjct: 82 ASRRSLRDDPNYDALIAALYPDIDKYEEEELTFHEEERNRNKQIQESIAQIFQRQSEALS 141
Query: 135 KRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDE 194
K+R GKDTA +TR +RN R HL RR+N RG E G EDN+D++D+N GKDSSS DE
Sbjct: 142 KKRILGKDTAGVILTRSRRNHRNVHL-RRQNGRGDEVSGYEDNDDDDDNNEGKDSSSADE 200
Query: 195 RSAEVRPRRRKRRSGIRSSQPSSSAANSDG--GCIENDLEVGRESRGISPGLVWNPEMLA 252
R EVR RR+KR +RSSQPSSS AN D GC E+DL++ RE+R +SPGLV N EML
Sbjct: 201 RFTEVRQRRKKRHPTVRSSQPSSSIANIDSGDGCAESDLDMSRENRTVSPGLVLNTEMLG 260
Query: 253 WGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAP 312
WGRGG RSN+RHGSA G +KSSRS+RL KL +YLR L+ENN+ELDV L+L+S D + P
Sbjct: 261 WGRGGVRSNSRHGSAGGSGNKSSRSSRLMKLAKYLRGLEENNNELDVHLLLISVDKESTP 320
Query: 313 SLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPI-------- 364
SLQQP+L C+PSL+VK L EYVS +TPLQA++VEIL +K R QSTP
Sbjct: 321 SLQQPHLYCRPSLTVKHLREYVSRKTPLQADDVEILSLKGRPRTSNEQSTPSASISIDGM 380
Query: 365 -----PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
P +LQ LEG+ LAGL+ + T + D LIL YR+K
Sbjct: 381 SLVFDPLKYELQSLEGEIFLAGLQSDCTYSRDLLILGYRRK 421
>gi|224079177|ref|XP_002305782.1| predicted protein [Populus trichocarpa]
gi|222848746|gb|EEE86293.1| predicted protein [Populus trichocarpa]
Length = 463
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/394 (62%), Positives = 304/394 (77%), Gaps = 17/394 (4%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
+V V+L EIRK+VQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 76 YVVVKLSEIRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 135
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALISALYPDIDKYEEEELAF EEE+ RNKQIQA+IA+ F RQ+EAL ++
Sbjct: 136 RRSLRDDPNYDALISALYPDIDKYEEEELAFQEEEKARNKQIQATIAQTFHRQAEALSRK 195
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
+T K TA+ F R R AH R RRN R QGS+DNED N D GGKDSSS DE S
Sbjct: 196 KTTAKVTAAAFARRTPSRFRDAHSRGRRNYRMAGFQGSDDNEDANGD-GGKDSSSADEHS 254
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
AEV+P+R K+ +G R S+A N+DGG END EV +ES G S GLV + E LAWG+
Sbjct: 255 AEVKPKRCKKWAGAR-----SAAVNADGGGDENDSEVNKESVGGSSGLVGSSERLAWGKN 309
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RS+TR+GSA+G N K++RS+R++KL +YLR+L+ N++ELD+ LMLVS D Q PSLQ+
Sbjct: 310 GMRSHTRYGSANGSNVKNARSSRISKLADYLRNLEGNDNELDINLMLVSFDEQRVPSLQR 369
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKE---RLDAKGNQSTPI-------PT 366
PYLCC+P+LS+ +LC+YV+ QT LQA EVEI +V+E ++D + STPI P
Sbjct: 370 PYLCCRPTLSINKLCQYVAFQTSLQANEVEIYLVREMNSKVDFSISMSTPISKPGIIDPC 429
Query: 367 TDQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
D+LQ+LE QETL L+ N+ + +L+LAYR+K
Sbjct: 430 KDKLQVLEEQETLGRLKTNNFIHG-YLLLAYRKK 462
>gi|255553681|ref|XP_002517881.1| ring finger protein, putative [Ricinus communis]
gi|223542863|gb|EEF44399.1| ring finger protein, putative [Ricinus communis]
Length = 342
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 256/377 (67%), Positives = 283/377 (75%), Gaps = 55/377 (14%)
Query: 45 MECLHRFCRECIDKSMRLG-----------------NNECPACRTHCASRRSLRDDPNYD 87
MECLHRFCRECIDKSMRLG NNECPACRTHCASRRSLRDDPNYD
Sbjct: 1 MECLHRFCRECIDKSMRLGYVRKILSYLSVIMSLLGNNECPACRTHCASRRSLRDDPNYD 60
Query: 88 ALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPF 147
ALI+ALYPDIDKYEEEELAFHEEERTRNKQIQASIA+IFQRQSEAL K+RT GK+T PF
Sbjct: 61 ALIAALYPDIDKYEEEELAFHEEERTRNKQIQASIAQIFQRQSEALAKKRTMGKETTGPF 120
Query: 148 MTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRR 207
+TR QRN RT RRRRNSRGTE+QGSED E+ENDDNGGKDSSS DERS EVR RRRKRR
Sbjct: 121 VTRSQRNHRTVPSRRRRNSRGTEYQGSEDIEEENDDNGGKDSSSTDERSTEVRQRRRKRR 180
Query: 208 SGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSA 267
GIR SQPSSSA+N +GG IENDLE GRE+RGISPGLVWN EMLAWGRGG RS+TRHG+A
Sbjct: 181 PGIRPSQPSSSASNLEGGSIENDLEAGRENRGISPGLVWNTEMLAWGRGGARSHTRHGNA 240
Query: 268 SGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSV 327
SGCN+K+SRSTRL+KLVEYLRSL+E ND
Sbjct: 241 SGCNNKNSRSTRLSKLVEYLRSLEEKND-------------------------------- 268
Query: 328 KQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQST--PIPTTDQLQILEGQETLAGLRVN 385
EY++ QTPLQAEEVEIL+VK N ST P ++LQIL+GQETLAGL+ N
Sbjct: 269 ----EYIAHQTPLQAEEVEILLVKGAHQPDDNISTLHPPILMEELQILKGQETLAGLKAN 324
Query: 386 HTSNTDHLILAYRQKQS 402
+ + D LILAYRQK++
Sbjct: 325 SSPSRDRLILAYRQKEA 341
>gi|297791429|ref|XP_002863599.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309434|gb|EFH39858.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 516
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/409 (59%), Positives = 304/409 (74%), Gaps = 19/409 (4%)
Query: 10 FSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPA 69
SG F+ ++L EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPA
Sbjct: 110 ISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPA 169
Query: 70 CRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQ 129
CR HCASRRSLRDDP +DALI+AL+ +ID YEEEELAFHE+E RNKQIQASIA+I QRQ
Sbjct: 170 CRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQISQRQ 229
Query: 130 SEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDN----G 185
SEALVKRR+ GK+ A+ M P+ + R RN + SE +ED+N+D+ G
Sbjct: 230 SEALVKRRSLGKE-AAVLMRSPRIASSSRRRRNCRNME--QQNASEAHEDDNNDDNNNRG 286
Query: 186 GKDSSSNDERSAEVRPRRRKRRSGIRSSQ-PSSSAAN-SDGGCIENDLEVGRESRGISPG 243
G SS+DER EVR ++R++RS RS+Q PSSS AN ++G C +ND EV R+S+GISPG
Sbjct: 287 GDKDSSSDERGTEVRHKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDSKGISPG 346
Query: 244 LVWNPEMLAWGRGGTRSNTRHG-SASGCNSKSSRSTRLNKLVEYLR-SLQENNDELDVRL 301
LVWN E+LAWGRGGTRSNTRHG S SG +SKS R+ R+NKLVEYLR S+ ++ ELD+ +
Sbjct: 347 LVWNQEILAWGRGGTRSNTRHGNSTSGGSSKSVRNARVNKLVEYLRSSIDGSSVELDIHV 406
Query: 302 MLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQS 361
LVS DT+C P L QPYLCC+P+L VKQL E+V+LQ L+ EEVE+L + + ++
Sbjct: 407 KLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQMHLKTEEVELLATRRGGEDMAIEN 466
Query: 362 TPIPT-------TDQLQILEGQETLAGLRVNH-TSNTDHLILAYRQKQS 402
P+ T D++Q LE ET + L+V+ +S+ HLI+AYR+KQ+
Sbjct: 467 LPVVTPASAATSKDEMQSLEDNETFSRLKVDFISSHEQHLIIAYRKKQT 515
>gi|145358843|ref|NP_199241.2| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|302425246|sp|Q9FKW0.2|RNG1A_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RING1a; AltName:
Full=Polycomb complex protein RING1a; AltName:
Full=Protein RING1a; Short=AtRING1a; AltName: Full=Ring
finger protein 434
gi|332007702|gb|AED95085.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
Length = 522
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 245/415 (59%), Positives = 307/415 (73%), Gaps = 24/415 (5%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 66
P SG F+ ++L EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE
Sbjct: 112 PSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 171
Query: 67 CPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIF 126
CPACR HCASRRSLRDDP +DALI+AL+ +ID YEEEELAFHE+E RNKQIQASIA+I
Sbjct: 172 CPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQIS 231
Query: 127 QRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQ--GSEDNEDENDDN 184
QRQSEALVKRR+ GK+ A R+PR A RRR + Q SE +ED+++D+
Sbjct: 232 QRQSEALVKRRSLGKEAAVLM-----RSPRIASGSRRRRNSRNMEQQNASEAHEDDDNDD 286
Query: 185 ----GGKDSSSNDERSAEVRPRRRKRRSGIRSSQ-PSSSAAN-SDGGCIENDLEVGRESR 238
G SS+DER EVR ++R++RS RS+Q PSSS AN ++G C +ND EV R+++
Sbjct: 287 NNNRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDTK 346
Query: 239 GISPGLVWNPEMLAWGRGGTRSNTRHG-SASGCNSKSSRSTRLNKLVEYLR-SLQENNDE 296
GISPGLVWNPE+LAWGRGGTRSNTRHG + SG +SKS R+ R+NKLVEYLR S+ ++ E
Sbjct: 347 GISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRSSVDGSSVE 406
Query: 297 LDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLD- 355
LD+ + LVS DT+C P L QPYLCC+P+L VKQL E+V+LQ L+ EEVE+L+ + R+
Sbjct: 407 LDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIHLKTEEVELLVTRRRVGE 466
Query: 356 --AKGNQSTPIPTT-----DQLQILEGQETLAGLRVNH-TSNTDHLILAYRQKQS 402
A N P + D++ LE ETL+ L+++ +S+ HLI+AYR+KQ+
Sbjct: 467 DAAIENLPAVTPASAAASKDEMLSLEDNETLSRLKIDFISSHEQHLIIAYRKKQT 521
>gi|255536761|ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
gi|223549346|gb|EEF50834.1| ring finger protein, putative [Ricinus communis]
Length = 418
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 237/376 (63%), Positives = 287/376 (76%), Gaps = 19/376 (5%)
Query: 36 GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYP 95
GII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI+ALYP
Sbjct: 45 GIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYP 104
Query: 96 DIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNP 155
DIDKYEEEELAFHEEE+ RNKQIQASI + +RQ+EAL ++RT K T +PF R Q
Sbjct: 105 DIDKYEEEELAFHEEEKARNKQIQASITQTIRRQAEALGRKRTTAKATVAPFARRTQGRY 164
Query: 156 RTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQP 215
R AH R RRN R + QGS++ ED N D GGKDSSS +E SAEV+P+R KR G R
Sbjct: 165 RDAHSRGRRNYRTADLQGSDEIEDVNGD-GGKDSSSAEEHSAEVKPKRIKRWGGAR---- 219
Query: 216 SSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSS 275
S AAN+DGG END EV RES G S GLV E LAWGRGG RS+TR+GSA+ N K++
Sbjct: 220 -SGAANADGGGDENDSEVNRESMGSSAGLVGPSERLAWGRGGIRSHTRYGSANAGNGKNA 278
Query: 276 RSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVS 335
R++R+ KL +YLR+L+ENN+ELD+ LMLVS D + PSLQ+PYLCC+P+LSVK L +YV+
Sbjct: 279 RNSRIFKLADYLRNLEENNNELDICLMLVSFDEEKIPSLQRPYLCCRPTLSVKHLRQYVA 338
Query: 336 LQTPLQAEEVEILMVKERLDAKGNQ--STPI---------PTTDQLQILEGQETLAGLRV 384
LQT LQ EE+EI +VKE L++K N ST I P D+LQ+LE QET+ GL+
Sbjct: 339 LQTALQTEEIEIYLVKE-LNSKFNSLPSTSISISKPGIIDPRKDKLQVLEEQETVGGLKT 397
Query: 385 NHTSNTDHLILAYRQK 400
N+ + H++LAY+++
Sbjct: 398 NNFTQ-GHVLLAYQKR 412
>gi|356542973|ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 433
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 250/398 (62%), Positives = 304/398 (76%), Gaps = 24/398 (6%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
+VFVEL EIRK+VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 47 YVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 106
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYP+I+KYE EEL F EE++ RNKQIQASIAK+ QRQSEALVKR
Sbjct: 107 RRSLRDDPNYDALIAALYPNIEKYEIEELQFCEEDKNRNKQIQASIAKVAQRQSEALVKR 166
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R +DT F+TR QRN + L RR+N + ++QGSE + ++ +DN KDSSS DER
Sbjct: 167 R---RDTPGSFVTRSQRNQQNV-LSRRQN-QVIDNQGSE-DNEDENDNNEKDSSSTDERC 220
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
E+R RRRKR++ R SQPSSS A+ DGGCIE+D+++ SR +S P+ L WG G
Sbjct: 221 TELRQRRRKRQTRGRPSQPSSSTASPDGGCIESDMDIRISSRPVS-----KPQKLTWGGG 275
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RS+TRHGS +G NSKSSRS+R+ KLV+YLRSL EN DELDV L+L+S D Q PSLQQ
Sbjct: 276 GFRSHTRHGSGNGSNSKSSRSSRMAKLVDYLRSLNENTDELDVHLILLSLDKQSTPSLQQ 335
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK-----------ERLDAKGNQSTPI- 364
P+LCC+P+LSVK LCEYV+ QTPL EEVEIL VK + + +T +
Sbjct: 336 PHLCCRPTLSVKHLCEYVAHQTPLPVEEVEILAVKGCCSTVCDKSFDETSSSDELTTLVI 395
Query: 365 -PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQKQ 401
P+ D+L+ L+G E+LAG++ S +HLILAYR+K+
Sbjct: 396 DPSKDELETLQGHESLAGIKSKCISKREHLILAYRRKE 433
>gi|356542160|ref|XP_003539538.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 500
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/400 (62%), Positives = 300/400 (75%), Gaps = 24/400 (6%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FV+VEL EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 108 FVYVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 167
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDI+KYE+EEL F EEE+ RNKQIQASIAK+ QRQSEALVKR
Sbjct: 168 RRSLRDDPNYDALIAALYPDIEKYEQEELEFREEEKNRNKQIQASIAKVVQRQSEALVKR 227
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R KDT F+TRPQRN R H RR+ T+ ++ +E +DN KDSSS DERS
Sbjct: 228 R---KDTPGAFVTRPQRNQRNIHSRRQ-----TQAIEGSEDNEEENDNNEKDSSSADERS 279
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
E R RRRKR + +R SQPSSS A+ DGGC ++D+++ +E+RGIS + + + L WGRG
Sbjct: 280 TEHRQRRRKRWARVRPSQPSSSMASPDGGCNDSDMDISKENRGISRQVSKHGK-LTWGRG 338
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RSNTRHGS G N+KSSRS+RL+K V++LR+L EN DE DV LMLVS D PSLQQ
Sbjct: 339 GFRSNTRHGSGGGSNNKSSRSSRLSKFVDHLRNLDENTDEFDVHLMLVSLDQLSTPSLQQ 398
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK----ERLDAKGNQSTPI-------- 364
PYLCC+P+LSVK L E+V+ QTPL E +EI+ VK D ++++ +
Sbjct: 399 PYLCCRPTLSVKHLYEHVARQTPLPVEGIEIVAVKGCCSTNCDKSADENSALAYDELSKL 458
Query: 365 ---PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQKQ 401
P D+L+IL+G ETLAGLR S HLI+AY+QK+
Sbjct: 459 VIDPHKDELEILQGHETLAGLRSKCISKMGHLIIAYKQKE 498
>gi|356515162|ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 455
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/398 (64%), Positives = 306/398 (76%), Gaps = 24/398 (6%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
+VFVEL EIRK+VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 69 YVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 128
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYP+I+KYE+EEL F EE++ RNKQIQASIAK+ QRQSEALVKR
Sbjct: 129 RRSLRDDPNYDALIAALYPNIEKYEQEELEFREEDKNRNKQIQASIAKVVQRQSEALVKR 188
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R +DT F+TR QRN R L RR+N +G ++QGSE + +E +DN KDSSS DER
Sbjct: 189 R---RDTPGSFVTRSQRNQRNV-LSRRQN-QGMDNQGSE-DNEEENDNNEKDSSSTDERC 242
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
E+R RRRKRR+ R SQPSSS A+ DGGCIE+D+++ IS LV P+ L WGRG
Sbjct: 243 TELRQRRRKRRTRGRPSQPSSSTASPDGGCIESDMDI-----RISSRLVSKPQKLTWGRG 297
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RS+TRHGS +G NSKSSRS+RL KLV+YL SL EN DELDV L+L+S D Q PSLQQ
Sbjct: 298 GFRSHTRHGSGNGSNSKSSRSSRLAKLVDYLHSLNENTDELDVHLILLSLDKQITPSLQQ 357
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK-----------ERLDAKGNQSTPI- 364
P+LCC+P+LSVK LCEYV+ QTPL EEVEIL VK + + +T +
Sbjct: 358 PHLCCRPTLSVKHLCEYVAHQTPLLVEEVEILAVKGCCSTVCDKSFDETSSSDELTTLVI 417
Query: 365 -PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQKQ 401
P+ D+L+ L+G E+LAG++ S +HLILAYR+K+
Sbjct: 418 DPSKDELETLQGHESLAGIKSKCISKREHLILAYRRKE 455
>gi|147774461|emb|CAN59794.1| hypothetical protein VITISV_001902 [Vitis vinifera]
Length = 636
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/420 (54%), Positives = 278/420 (66%), Gaps = 82/420 (19%)
Query: 17 FVFVELPEIRKDVQCPICLGIIK---------------------------KTRTVMECLH 49
FV V+L EIRK+VQCPICLG ++ KTRTVMECLH
Sbjct: 241 FVIVKLAEIRKEVQCPICLGHLQETARCMIAHHLKEFVXAYDIACMGSSGKTRTVMECLH 300
Query: 50 RFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEE------ 103
RFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI+ALYPDIDKYE+E
Sbjct: 301 RFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEQEVYLTNS 360
Query: 104 -------ELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPR 156
ELAFHEEE+TRNKQIQASIA+ +RQSEAL ++RT K TA+ F R Q N R
Sbjct: 361 MPSQIGKELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRTTAKATAAAFARRSQGNYR 420
Query: 157 TAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPS 216
RRN R T+ GSED+ED N ++GGKDSSS ++ SAEV+P+R +R G+R SQPS
Sbjct: 421 RG----RRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKRSRRWGGVRFSQPS 476
Query: 217 SSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSR 276
S +AN+DGG ENDLE RE+ G S GLV N E+LAWG+GG RS+TR+GS SG N K++R
Sbjct: 477 SGSANADGGGDENDLEANREAMGASAGLVGNSEILAWGKGGMRSHTRYGSVSGGNGKNAR 536
Query: 277 STRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSL 336
S+RL+KLV+YLR+L +N+D EYV+L
Sbjct: 537 SSRLSKLVDYLRNLDQNDD------------------------------------EYVAL 560
Query: 337 QTPLQAEEVEILMVKERLDA--KGNQSTPIPTTDQLQILEGQETLAGLRVNHTSNTDHLI 394
QTPL A+EVEIL++KE+L N S+P P +D+LQ+LE QETLA L+ +N HL+
Sbjct: 561 QTPLLADEVEILVIKEQLSKLNPSNSSSPDPCSDRLQVLEAQETLAVLKTMRNANQSHLV 620
>gi|297843186|ref|XP_002889474.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335316|gb|EFH65733.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 464
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/386 (55%), Positives = 286/386 (74%), Gaps = 15/386 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
+++V+L +IR+DVQC ICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECP CR HCAS
Sbjct: 89 YLYVDLADIRRDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCAS 148
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPN+DALI+ L+ +ID++EEEE+AF ++++ RNKQIQASIA++ QRQSEAL KR
Sbjct: 149 RRSLRDDPNFDALIATLFENIDQFEEEEMAFRQDDKARNKQIQASIAQVSQRQSEALAKR 208
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
++ GKD A + + RRRRN R E SE ++D++ + GKDSSS DE
Sbjct: 209 KSFGKDAA----VLSRSRRSGSGSRRRRNCRNMEQDTSEAHDDDDQNKRGKDSSS-DEPC 263
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVG--RESRGISPGLVWNPEMLAWG 254
AE+ R+RK+RS ++QPSSS AN++ C N E R+SRGISP L+WN E+LAWG
Sbjct: 264 AEILLRKRKKRS---TTQPSSSNANNNDNCAGNGTEQTHQRDSRGISPVLMWNSEILAWG 320
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
RGGTRSNTR G+ + + S R+ RLN+LVEYL SL+ N+ ELD+ L L+S DT+ +L
Sbjct: 321 RGGTRSNTRQGNNNQ-GAISKRNARLNRLVEYLGSLEGNSVELDIHLKLISLDTEGLLNL 379
Query: 315 QQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILE 374
+PYLCC+P+L VKQL EYV+ Q L+AEEVE+ + K+ GN++ +T+++Q L+
Sbjct: 380 LEPYLCCRPTLLVKQLREYVARQMKLKAEEVELFVSKDGDRVIGNKT----STEKMQSLQ 435
Query: 375 GQETLAGLRVNHTSNTDHLILAYRQK 400
ETL+ L+V+ S+ ++I+A+R K
Sbjct: 436 DDETLSKLKVDCISSHGYMIVAFRDK 461
>gi|10176883|dbj|BAB10113.1| unnamed protein product [Arabidopsis thaliana]
Length = 486
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/414 (53%), Positives = 279/414 (67%), Gaps = 58/414 (14%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 66
P SG F+ ++L EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE
Sbjct: 112 PSSISGDQSEFMEIDLGEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 171
Query: 67 CPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIF 126
CPACR HCASRRSLRDDP +DALI+AL+ +ID YEEEELAFHE+E RNKQIQASIA+I
Sbjct: 172 CPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASIAQIS 231
Query: 127 QRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQ--GSEDNEDENDDN 184
QRQSEALVKRR+ GK+ A R+PR A RRR + Q SE +ED+++D+
Sbjct: 232 QRQSEALVKRRSLGKEAAVLM-----RSPRIASGSRRRRNSRNMEQQNASEAHEDDDNDD 286
Query: 185 G---GKD-SSSNDERSAEVRPRRRKRRSGIRSSQ-PSSSAAN-SDGGCIENDLEVGRESR 238
G+D SS+DER EVR ++R++RS RS+Q PSSS AN ++G C +ND EV R+++
Sbjct: 287 NNNRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDTK 346
Query: 239 GISPGLVWNPEMLAWGRGGTRSNTRHG-SASGCNSKSSRSTRLNKLVEYLRSLQENNDEL 297
GISPGLVWNPE+LAWGRGGTRSNTRHG + SG +SKS R+ R+NKLVEYLRS
Sbjct: 347 GISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRS-------- 398
Query: 298 DVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAK 357
S D E+V+LQ L+ EEVE+L+ + R+
Sbjct: 399 -------SVDGSS--------------------VEFVALQIHLKTEEVELLVTRRRVGED 431
Query: 358 G--------NQSTPIPTTDQLQILEGQETLAGLRVNH-TSNTDHLILAYRQKQS 402
++ + D++ LE ETL+ L+++ +S+ HLI+AYR+KQ+
Sbjct: 432 AAIENLPAVTPASAAASKDEMLSLEDNETLSRLKIDFISSHEQHLIIAYRKKQT 485
>gi|147852495|emb|CAN78516.1| hypothetical protein VITISV_039748 [Vitis vinifera]
Length = 479
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/360 (63%), Positives = 262/360 (72%), Gaps = 59/360 (16%)
Query: 64 NNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQI----- 118
NNECPACRTHCASRRSLRDDPNYDALI+ALYPDIDKYEEEELAFHEEE+TRNKQI
Sbjct: 153 NNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQICISAH 212
Query: 119 ---QASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSE 175
QASIA+I QRQSEAL ++RT GKD A PFMTR QRN R A+ RRR+N RG++ QGS+
Sbjct: 213 LQIQASIAQILQRQSEALNRKRTLGKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSD 272
Query: 176 DNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSA-ANSDGGCIENDLEVG 234
DNEDEND++GGK SSS +ERS EV+ RR KRR+GIR QPSSS+ ANSDGGCIENDLEV
Sbjct: 273 DNEDENDNDGGKGSSSAEERSTEVKRRRYKRRAGIRLIQPSSSSVANSDGGCIENDLEVN 332
Query: 235 RESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENN 294
RESRG SPGLVWNPEMLAWGRGG RS+TRHGS+SGCN KS+RSTRL+KLV+YLRSL EN+
Sbjct: 333 RESRGFSPGLVWNPEMLAWGRGGARSHTRHGSSSGCNHKSARSTRLSKLVDYLRSLGEND 392
Query: 295 DELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK--- 351
+ EYV+LQTPL+AEEVEIL+VK
Sbjct: 393 N------------------------------------EYVALQTPLRAEEVEILVVKGCH 416
Query: 352 ERLDAKGNQSTPI-----------PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
N ST + P+ D+LQILEGQETL GL+ N TS + L+LAYRQK
Sbjct: 417 NDYQPFPNPSTSVDDLNPDPIVXDPSKDELQILEGQETLVGLQANGTSCRNQLVLAYRQK 476
>gi|238481477|ref|NP_001154760.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
gi|332007703|gb|AED95086.1| putative E3 ubiquitin-protein ligase RING1a [Arabidopsis thaliana]
Length = 525
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 221/419 (52%), Positives = 289/419 (68%), Gaps = 29/419 (6%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKS----MRL 62
P SG F+ ++L EIRKDVQCPICL +K R + ++ ++C S
Sbjct: 112 PSSISGDQSEFMEIDLGEIRKDVQCPICLVGMKFLRLFI-SYYKENKDCDGMSPQFCATF 170
Query: 63 GNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASI 122
NNECPACR HCASRRSLRDDP +DALI+AL+ +ID YEEEELAFHE+E RNKQIQASI
Sbjct: 171 KNNECPACRKHCASRRSLRDDPKFDALIAALFTNIDSYEEEELAFHEDEMARNKQIQASI 230
Query: 123 AKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQ--GSEDNEDE 180
A+I QRQSEALVKRR+ GK+ A R+PR A RRR + Q SE +ED+
Sbjct: 231 AQISQRQSEALVKRRSLGKEAAVLM-----RSPRIASGSRRRRNSRNMEQQNASEAHEDD 285
Query: 181 NDDN----GGKDSSSNDERSAEVRPRRRKRRSGIRSSQ-PSSSAAN-SDGGCIENDLEVG 234
++D+ G SS+DER EVR ++R++RS RS+Q PSSS AN ++G C +ND EV
Sbjct: 286 DNDDNNNRGRDKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVY 345
Query: 235 RESRGISPGLVWNPEMLAWGRGGTRSNTRHG-SASGCNSKSSRSTRLNKLVEYLR-SLQE 292
R+++GISPGLVWNPE+LAWGRGGTRSNTRHG + SG +SKS R+ R+NKLVEYLR S+
Sbjct: 346 RDTKGISPGLVWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRSSVDG 405
Query: 293 NNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKE 352
++ ELD+ + LVS DT+C P L QPYLCC+P+L VKQL E+V+LQ L+ EEVE+L+ +
Sbjct: 406 SSVELDIHVKLVSLDTKCIPDLPQPYLCCRPTLLVKQLREFVALQIHLKTEEVELLVTRR 465
Query: 353 RLD---AKGNQSTPIPTT-----DQLQILEGQETLAGLRVNH-TSNTDHLILAYRQKQS 402
R+ A N P + D++ LE ETL+ L+++ +S+ HLI+AYR+KQ+
Sbjct: 466 RVGEDAAIENLPAVTPASAAASKDEMLSLEDNETLSRLKIDFISSHEQHLIIAYRKKQT 524
>gi|145335046|ref|NP_171873.2| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|122230252|sp|Q0WX00.1|RNG1B_ARATH RecName: Full=Putative E3 ubiquitin-protein ligase RING1b; AltName:
Full=Polycomb complex protein RING1b; AltName:
Full=Protein RING1b; Short=AtRING1b; AltName: Full=Ring
finger protein 5
gi|110740485|dbj|BAE98348.1| hypothetical protein [Arabidopsis thaliana]
gi|332189487|gb|AEE27608.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 460
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 212/387 (54%), Positives = 278/387 (71%), Gaps = 19/387 (4%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
++ V+L +I KDVQC ICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECP CR HCAS
Sbjct: 89 YMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCAS 148
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPN+DALI+AL+ +IDK+EEEEL F +++ RNKQIQASIA++ QRQS+ALVKR
Sbjct: 149 RRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKR 208
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
++ GK TA + RRRRN R E SE N+D++ + GKDSSS+
Sbjct: 209 KSVGKGTA----ILSRSRRSGGGSRRRRNCRNIEQDTSEANDDDDQNKRGKDSSSD---- 260
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVG--RESRGISPGLVWNPEMLAWG 254
E R+RK+RS ++QPSSS AN++ C N E R+SR ISP LVWN E++AWG
Sbjct: 261 -EPCERQRKKRS---ATQPSSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWG 316
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
RGGTRSNTR G+ + + S R+ RL +LVEYL SL+ N+ ELD+ L LVS DT+ +L
Sbjct: 317 RGGTRSNTRQGNNNQ-GAISKRNARLKRLVEYLGSLEGNSVELDIHLKLVSLDTEGLLNL 375
Query: 315 QQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILE 374
+PYLC +P+L VKQL EYV+ L+AEEVE+L+ K+ GN++ +T+++Q L+
Sbjct: 376 HEPYLCFRPTLLVKQLREYVARHLKLKAEEVELLVSKDGDTVIGNKT----STEKMQSLQ 431
Query: 375 GQETLAGLRVNHTSNTDHLILAYRQKQ 401
ET+A L+V+ S+ ++I+ YR+KQ
Sbjct: 432 DDETVAKLKVDCISSNGYMIVVYRRKQ 458
>gi|334182273|ref|NP_001184900.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|332189488|gb|AEE27609.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 466
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/393 (53%), Positives = 278/393 (70%), Gaps = 25/393 (6%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
++ V+L +I KDVQC ICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECP CR HCAS
Sbjct: 89 YMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCAS 148
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPN+DALI+AL+ +IDK+EEEEL F +++ RNKQIQASIA++ QRQS+ALVKR
Sbjct: 149 RRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKR 208
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
++ GK TA + RRRRN R E SE N+D++ + GKDSSS+
Sbjct: 209 KSVGKGTA----ILSRSRRSGGGSRRRRNCRNIEQDTSEANDDDDQNKRGKDSSSD---- 260
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVG--RESRGISPGLVWNPEMLAWG 254
E R+RK+RS ++QPSSS AN++ C N E R+SR ISP LVWN E++AWG
Sbjct: 261 -EPCERQRKKRS---ATQPSSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWG 316
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
RGGTRSNTR G+ + + S R+ RL +LVEYL SL+ N+ ELD+ L LVS DT+ +L
Sbjct: 317 RGGTRSNTRQGNNNQ-GAISKRNARLKRLVEYLGSLEGNSVELDIHLKLVSLDTEGLLNL 375
Query: 315 QQPYLCCQPSLSVKQLCE------YVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTD 368
+PYLC +P+L VKQL E YV+ L+AEEVE+L+ K+ GN++ +T+
Sbjct: 376 HEPYLCFRPTLLVKQLREVSSLPLYVARHLKLKAEEVELLVSKDGDTVIGNKT----STE 431
Query: 369 QLQILEGQETLAGLRVNHTSNTDHLILAYRQKQ 401
++Q L+ ET+A L+V+ S+ ++I+ YR+KQ
Sbjct: 432 KMQSLQDDETVAKLKVDCISSNGYMIVVYRRKQ 464
>gi|334182275|ref|NP_001184901.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
gi|332189489|gb|AEE27610.1| ubiquitin-protein ligase RNF1/2 [Arabidopsis thaliana]
Length = 468
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/393 (53%), Positives = 278/393 (70%), Gaps = 25/393 (6%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
++ V+L +I KDVQC ICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECP CR HCAS
Sbjct: 91 YMVVDLADICKDVQCSICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCAS 150
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPN+DALI+AL+ +IDK+EEEEL F +++ RNKQIQASIA++ QRQS+ALVKR
Sbjct: 151 RRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKR 210
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
++ GK TA + RRRRN R E SE N+D++ + GKDSSS+
Sbjct: 211 KSVGKGTA----ILSRSRRSGGGSRRRRNCRNIEQDTSEANDDDDQNKRGKDSSSD---- 262
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVG--RESRGISPGLVWNPEMLAWG 254
E R+RK+RS ++QPSSS AN++ C N E R+SR ISP LVWN E++AWG
Sbjct: 263 -EPCERQRKKRS---ATQPSSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWG 318
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
RGGTRSNTR G+ + + S R+ RL +LVEYL SL+ N+ ELD+ L LVS DT+ +L
Sbjct: 319 RGGTRSNTRQGNNNQ-GAISKRNARLKRLVEYLGSLEGNSVELDIHLKLVSLDTEGLLNL 377
Query: 315 QQPYLCCQPSLSVKQLCE------YVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTD 368
+PYLC +P+L VKQL E YV+ L+AEEVE+L+ K+ GN++ +T+
Sbjct: 378 HEPYLCFRPTLLVKQLREVSSLPLYVARHLKLKAEEVELLVSKDGDTVIGNKT----STE 433
Query: 369 QLQILEGQETLAGLRVNHTSNTDHLILAYRQKQ 401
++Q L+ ET+A L+V+ S+ ++I+ YR+KQ
Sbjct: 434 KMQSLQDDETVAKLKVDCISSNGYMIVVYRRKQ 466
>gi|356546993|ref|XP_003541903.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Glycine max]
Length = 501
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 248/400 (62%), Positives = 292/400 (73%), Gaps = 26/400 (6%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FV+VEL EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 111 FVYVELLEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 170
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALISALYPDI+KYEEEEL F EEE+ RNKQIQASIAK+ QRQSEALVKR
Sbjct: 171 RRSLRDDPNYDALISALYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKR 230
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R KDT F+TR + +R + +GSE + +E +DN K+SSS+DERS
Sbjct: 231 R---KDTPGTFVTR-------SQRNQRNRRQTQAIEGSE-DNEEENDNNEKNSSSDDERS 279
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRG 256
E R RRRKR + +RSSQPSSS + DGGC ++D+++ RE+RGIS V L WGRG
Sbjct: 280 TEHRQRRRKRWARVRSSQPSSSMTSPDGGCNDSDMDISRENRGISSRQVSKHGKLTWGRG 339
Query: 257 GTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQ 316
G RSNTRHGS NSKSSRS+RL+K V++LR+L EN DE DV LMLVS D Q SLQQ
Sbjct: 340 GFRSNTRHGSGGSSNSKSSRSSRLSKFVDHLRNLDENTDEFDVHLMLVSLDQQSTSSLQQ 399
Query: 317 PYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK----ERLDAKGNQSTPI-------- 364
PYLCC+P+LSV+ L E+V+ QT L E +EIL VK D N+++ +
Sbjct: 400 PYLCCRPTLSVRHLYEHVARQTHLPVEGIEILAVKGCCSTNRDKSTNENSDLAYDELSTL 459
Query: 365 ---PTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQKQ 401
P D+L+IL+G ETL+GLR S HLI+AY QK+
Sbjct: 460 VIDPHKDELEILQGHETLSGLRSKCISKMGHLIIAYNQKE 499
>gi|222632098|gb|EEE64230.1| hypothetical protein OsJ_19063 [Oryza sativa Japonica Group]
Length = 821
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/337 (56%), Positives = 244/337 (72%), Gaps = 7/337 (2%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L +IRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 84 FILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 143
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI ALYPDIDKYEEEELAF EEERTRNK+IQASIA+ F+RQSEALVK+
Sbjct: 144 RRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQASIAETFRRQSEALVKK 203
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNE-DENDDNGGKDSSSNDER 195
R+ K T S R + N R A R R +S +ED + DEN + G K+SSS D+R
Sbjct: 204 RSVAKATGSTITRRTRGNMR-AKRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDR 262
Query: 196 SAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIE-NDLEVGRESRGISPGLVWNPEMLAWG 254
S +VR ++R RR + S P+ S D + +DL GR+ SP EMLAWG
Sbjct: 263 SPDVR-QKRVRRWPVPRSSPAKSIGGIDSSFEDIDDLGSGRDIMSTSP---LRGEMLAWG 318
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
+ GTRS TRHG++ G + + ++ R+ KLVEYLR+ E +++ ++ L+L+ + Q P L
Sbjct: 319 KNGTRSQTRHGNSGGSSGRMAKGGRVTKLVEYLRNTDEFDNKFNLYLVLLPLNGQSMPKL 378
Query: 315 QQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK 351
++PYL CQP+ SV+ LC++V+LQ A+EVEI + K
Sbjct: 379 EKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIFIRK 415
>gi|449434332|ref|XP_004134950.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
gi|449479584|ref|XP_004155643.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Cucumis sativus]
Length = 427
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/391 (51%), Positives = 271/391 (69%), Gaps = 22/391 (5%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L +IRK+VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN ECPACRTHCAS
Sbjct: 51 FIAVKLSDIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNKECPACRTHCAS 110
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYD LI+ LYPDI+KYEEEELAF EEE+ RNKQIQ SIA+ QRQ+E+L ++
Sbjct: 111 RRSLRDDPNYDTLIAVLYPDIEKYEEEELAFQEEEKARNKQIQTSIAQTLQRQTESLGRK 170
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R+ P R P++ E ++NEDEND + K+SSS DER
Sbjct: 171 RS------KPSRRLSSRGPKSFQ-------NHIESLCFDENEDENDYDVSKNSSSADER- 216
Query: 197 AEVRPRRRKRRSGIRSSQPSSSA--ANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWG 254
+ RP+R +R +R SQ SS+ +DGG IE++ EV +E G S GLV + E L+WG
Sbjct: 217 MDTRPKRPRRCGPVRFSQSSSATGADGADGGGIEHEYEVNKEKVGASLGLVGSSEKLSWG 276
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQE-NNDELDVRLMLVSADTQCAPS 313
+GG RS+TR+G +G K SR+ R+ KL +Y+R+ + + +ELD+ ++LVS D + P+
Sbjct: 277 KGGIRSHTRYGGTNGGAGKISRNNRIAKLSDYVRNSENVSEEELDIHVLLVSMD-RTIPA 335
Query: 314 LQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKE---RLDAKGNQSTPIPTTDQL 370
LQ+PY+CC+PS+ + L +YV+L+T L + VEI + KE +LD +++T P + +
Sbjct: 336 LQRPYICCRPSVMIGHLSQYVALETSLSVDVVEICVAKELQVKLDPSTSEATKNPCKESV 395
Query: 371 QILEGQETLAGLRVN-HTSNTDHLILAYRQK 400
QIL QETL+ ++ H +L+LAY++K
Sbjct: 396 QILNEQETLSTAKLKAHRLACGYLLLAYKKK 426
>gi|242076968|ref|XP_002448420.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
gi|241939603|gb|EES12748.1| hypothetical protein SORBIDRAFT_06g026880 [Sorghum bicolor]
Length = 493
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 177/340 (52%), Positives = 233/340 (68%), Gaps = 12/340 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECP CRTHCAS
Sbjct: 99 FMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPTCRTHCAS 158
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDP YDALI+ALYPDIDKYEEEE AF E+ER NK+IQ +I + F+RQS+A+ K+
Sbjct: 159 RRSLRDDPKYDALIAALYPDIDKYEEEEFAFSEQERIHNKKIQETIEETFRRQSDAIGKK 218
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGS--EDNEDENDDNGGKDSSSNDE 194
R+ K TA+ F R R R R + GS ED E+EN ++ S D+
Sbjct: 219 RSMAKATATAFA----RKYRRTRGRVRTIAPDIAPTGSADEDREEENSKETTREQCSTDD 274
Query: 195 RSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPEMLAW 253
S ++R +R ++RSG + S P+ + + D C END L G+E SP EMLAW
Sbjct: 275 HSPDLRQKRCRKRSGPQGS-PAGTIGSIDHNCEENDELVGGKEILATSP---LQGEMLAW 330
Query: 254 GRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPS 313
G+ GTRS RHGS G N + RS R+ KLV++LR+ E + E + L+L+ D Q P+
Sbjct: 331 GKNGTRSQNRHGSV-GSNGRIGRSGRIAKLVDHLRTADELDKEFQLYLVLLPVDGQTIPN 389
Query: 314 LQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKER 353
L++PYL C+P+LS++ L ++V+LQ + EE+E+ + +R
Sbjct: 390 LEKPYLSCRPTLSIQHLVQFVALQLSWKVEELEMYIRMDR 429
>gi|48475210|gb|AAT44279.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 823
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/337 (53%), Positives = 231/337 (68%), Gaps = 21/337 (6%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L +IRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 100 FILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 159
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI ALYPDIDKYEEE IQASIA+ F+RQSEALVK+
Sbjct: 160 RRSLRDDPNYDALILALYPDIDKYEEE--------------IQASIAETFRRQSEALVKK 205
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNE-DENDDNGGKDSSSNDER 195
R+ K T S R + N R A R R +S +ED + DEN + G K+SSS D+R
Sbjct: 206 RSVAKATGSTITRRTRGNMR-AKRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDR 264
Query: 196 SAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIE-NDLEVGRESRGISPGLVWNPEMLAWG 254
S +VR ++R RR + S P+ S D + +DL GR+ SP EMLAWG
Sbjct: 265 SPDVR-QKRVRRWPVPRSSPAKSIGGIDSSFEDIDDLGSGRDIMSTSP---LRGEMLAWG 320
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
+ GTRS TRHG++ G + + ++ R+ KLVEYLR+ E +++ ++ L+L+ + Q P L
Sbjct: 321 KNGTRSQTRHGNSGGSSGRMAKGGRVTKLVEYLRNTDEFDNKFNLYLVLLPLNGQSMPKL 380
Query: 315 QQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK 351
++PYL CQP+ SV+ LC++V+LQ A+EVEI + K
Sbjct: 381 EKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIFIRK 417
>gi|242058973|ref|XP_002458632.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
gi|241930607|gb|EES03752.1| hypothetical protein SORBIDRAFT_03g037070 [Sorghum bicolor]
Length = 472
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 193/391 (49%), Positives = 258/391 (65%), Gaps = 19/391 (4%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 91 FMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 150
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDP YDALI+ALYPDIDKYEEEELAF+E+ER RN++IQ +I + F+RQSEA+ K+
Sbjct: 151 RRSLRDDPKYDALIAALYPDIDKYEEEELAFNEQERIRNQKIQETIEETFRRQSEAIGKK 210
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGS--EDNEDENDDNGGKDSSSNDE 194
R+ K TA+ F +R R R R + GS ED EDEN + K+ S ++
Sbjct: 211 RSTAKATATAF-SRRYRRNMRTRGRGRTVTPDIAPTGSDEEDREDENANEVTKEPPSAND 269
Query: 195 RSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPEMLAW 253
S ++R +R ++ S ++S P+ + +SD END L G+E SP EMLAW
Sbjct: 270 HSPDLRLKRCRKTSASQAS-PARNIGSSDHSFEENDELVGGKEFLATSP---LRGEMLAW 325
Query: 254 GRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPS 313
G+ GTRS RHGSA G N + RS R+ KLV++LR+ E + E + L+L+ D Q PS
Sbjct: 326 GKNGTRSQNRHGSA-GSNGRIGRSGRIAKLVDHLRNTDEMDKEFQLYLVLLPVDGQTIPS 384
Query: 314 LQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLD----AKGNQSTPIPTTDQ 369
L++PYL CQP+LS++ L + +++Q + EE+E+ + R+D + G+ ++ D
Sbjct: 385 LEKPYLSCQPTLSIQHLVQLIAVQLSRKVEELEMYI---RMDHHHGSAGSMASSTGEFDG 441
Query: 370 LQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
L+ L + L+ L H S L L Y K
Sbjct: 442 LERLREDKLLSDL---HPSCNGDLELRYALK 469
>gi|111183164|gb|ABH07901.1| putative zinc finger protein [Solanum lycopersicum]
Length = 433
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 195/370 (52%), Positives = 254/370 (68%), Gaps = 24/370 (6%)
Query: 36 GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYP 95
GII+KTRTVMECLHRFCRECIDKSMR+GNNECPACRTHCASRRSLRDDPNYDALI+ LYP
Sbjct: 42 GIIRKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCASRRSLRDDPNYDALIAFLYP 101
Query: 96 DIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNP 155
DIDK+EEEE AFHEE++ NKQIQASIA+ QRQSEAL ++R+ A+ F R Q N
Sbjct: 102 DIDKFEEEEFAFHEEDKALNKQIQASIAQTSQRQSEALGRKRSA---RAAAFTRRSQGNY 158
Query: 156 RTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQP 215
R +LR RRN +G EH S++ ED N D GKDSSS DERS EV+P+R+K+R+G +P
Sbjct: 159 R--NLRGRRNYQGAEHHISDEEEDGNHD-VGKDSSSADERSIEVKPKRQKKRAG----RP 211
Query: 216 SSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSS 275
S ++A S+ END E +ES G GL+ E+LAWG+GG RSN RHG G K S
Sbjct: 212 SQASAASE----ENDAETNQESFGACSGLIRCSEILAWGKGGMRSNNRHGGLGGGIGKVS 267
Query: 276 RSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVS 335
R++R++KL+ L E +LD RLMLVS + PSLQ+PYL CQP++ VK L +YV+
Sbjct: 268 RNSRVSKLIASLSRSDEYEGKLDARLMLVSFSEEDIPSLQRPYLSCQPTMEVKHLRQYVA 327
Query: 336 LQTPLQAEEVEILMVKERLDAKGNQSTPI----------PTTDQLQILEGQETLAGLRVN 385
QT ++ E++I+++KE+ S+ I P+ ++Q +E +TL ++
Sbjct: 328 QQTSIEVGEIDIVLIKEKNPTDNPSSSDIMAISKPIVGDPSKAEIQTVEEHQTLGEIQET 387
Query: 386 HTSNTDHLIL 395
N +L++
Sbjct: 388 FGLNQRNLLM 397
>gi|293331775|ref|NP_001169665.1| uncharacterized LOC100383546 [Zea mays]
gi|224030721|gb|ACN34436.1| unknown [Zea mays]
gi|414880136|tpg|DAA57267.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 474
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 189/390 (48%), Positives = 253/390 (64%), Gaps = 14/390 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECP+CRTHCAS
Sbjct: 90 FMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPSCRTHCAS 149
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAF+E+E TRN++IQ +I + F+RQS+A+ K+
Sbjct: 150 RRSLRDDPNYDALIAALYPDIDKYEEEELAFNEQEMTRNQKIQETIEETFRRQSQAIGKK 209
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSR-GTEHQGSEDNEDENDDNGGKDSSSNDER 195
R+ K+T + F + +RN RT R ED E EN + K SS D+
Sbjct: 210 RSIAKETGTAFARKYRRNMRTRGRGRTTTPDIAPTSSNEEDREGENVNEVTKVPSSADDH 269
Query: 196 SAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPEMLAWG 254
S ++R ++R R++ + P+ + +SD END L +E SP EMLAWG
Sbjct: 270 SPDLR-QKRCRKTSTSQASPARNIGSSDHSFEENDELVAAKEILATSP---LRGEMLAWG 325
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
+ GTRS RHGSA G N + RS R+ KLV++L + E + E + L+L+ D Q P L
Sbjct: 326 KNGTRSQNRHGSA-GSNGRIGRSGRIAKLVDHLCNADEMDKEFQLYLVLLPVDGQTIPHL 384
Query: 315 QQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAK----GNQSTPIPTTDQL 370
++PYL CQP+LS++ L E ++LQ + EE+E+ + R+D G+ + I D L
Sbjct: 385 EKPYLSCQPTLSIQHLVELIALQLSRKVEELEMYI---RMDGDHGSVGSMACSIGEFDGL 441
Query: 371 QILEGQETLAGLRVNHTSNTDHLILAYRQK 400
+ L + L+ L + S+ L L Y K
Sbjct: 442 ERLREDKLLSELHPSFASSNGDLELRYALK 471
>gi|413919169|gb|AFW59101.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 497
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 234/344 (68%), Gaps = 8/344 (2%)
Query: 11 SGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+G F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPAC
Sbjct: 95 AGTMDEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPAC 154
Query: 71 RTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS 130
RTHCASRRSLRDDPNYDALI+ALYPDIDKYEEEE AF E+ER RNK+IQ +I + F+RQS
Sbjct: 155 RTHCASRRSLRDDPNYDALIAALYPDIDKYEEEEFAFSEQERIRNKKIQETIEETFRRQS 214
Query: 131 EALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSS 190
+A+ K+R+ K TA+ F + +R +R E++ + N ++ S
Sbjct: 215 DAIGKKRSMAKATATAFARKYRRT--RGRVRTIPPDIAPTGSSEEESGEGNSKETIREQS 272
Query: 191 SNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPE 249
S D+ S ++R +R ++RSG + S P+ + + D END L G+E SP E
Sbjct: 273 SADDHSPDLRQKRCRKRSGPQGS-PAGTIGSIDYSFEENDELVGGKEILATSP---LQGE 328
Query: 250 MLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQ 309
MLAWG+ G RS RHGS G N ++ RS R+ KLV+YL + E + E + L+L+ D Q
Sbjct: 329 MLAWGKNGARSQNRHGSV-GSNGRTGRSGRIAKLVDYLHTADEMDKEFQLFLLLLPVDGQ 387
Query: 310 CAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKER 353
P+L++PYL C+P+LS+K L ++V+LQ + EE+E+ + +R
Sbjct: 388 TIPNLEKPYLSCRPTLSIKHLAQFVALQLSCEVEELEMYIRMDR 431
>gi|195650523|gb|ACG44729.1| protein binding protein [Zea mays]
gi|413919170|gb|AFW59102.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 487
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/344 (50%), Positives = 234/344 (68%), Gaps = 8/344 (2%)
Query: 11 SGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+G F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPAC
Sbjct: 95 AGTMDEFMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPAC 154
Query: 71 RTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS 130
RTHCASRRSLRDDPNYDALI+ALYPDIDKYEEEE AF E+ER RNK+IQ +I + F+RQS
Sbjct: 155 RTHCASRRSLRDDPNYDALIAALYPDIDKYEEEEFAFSEQERIRNKKIQETIEETFRRQS 214
Query: 131 EALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSS 190
+A+ K+R+ K TA+ F + +R +R E++ + N ++ S
Sbjct: 215 DAIGKKRSMAKATATAFARKYRRT--RGRVRTIPPDIAPTGSSEEESGEGNSKETIREQS 272
Query: 191 SNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPE 249
S D+ S ++R +R ++RSG + S P+ + + D END L G+E SP E
Sbjct: 273 SADDHSPDLRQKRCRKRSGPQGS-PAGTIGSIDYSFEENDELVGGKEILATSP---LQGE 328
Query: 250 MLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQ 309
MLAWG+ G RS RHGS G N ++ RS R+ KLV+YL + E + E + L+L+ D Q
Sbjct: 329 MLAWGKNGARSQNRHGSV-GSNGRTGRSGRIAKLVDYLHTADEMDKEFQLFLLLLPVDGQ 387
Query: 310 CAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKER 353
P+L++PYL C+P+LS+K L ++V+LQ + EE+E+ + +R
Sbjct: 388 TIPNLEKPYLSCRPTLSIKHLAQFVALQLSCEVEELEMYIRMDR 431
>gi|226507818|ref|NP_001146078.1| uncharacterized LOC100279610 [Zea mays]
gi|219885587|gb|ACL53168.1| unknown [Zea mays]
gi|413919168|gb|AFW59100.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 475
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 173/338 (51%), Positives = 232/338 (68%), Gaps = 8/338 (2%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 89 FMLVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 148
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEE AF E+ER RNK+IQ +I + F+RQS+A+ K+
Sbjct: 149 RRSLRDDPNYDALIAALYPDIDKYEEEEFAFSEQERIRNKKIQETIEETFRRQSDAIGKK 208
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
R+ K TA+ F + +R +R E++ + N ++ SS D+ S
Sbjct: 209 RSMAKATATAFARKYRRT--RGRVRTIPPDIAPTGSSEEESGEGNSKETIREQSSADDHS 266
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPEMLAWGR 255
++R +R ++RSG + S P+ + + D END L G+E SP EMLAWG+
Sbjct: 267 PDLRQKRCRKRSGPQGS-PAGTIGSIDYSFEENDELVGGKEILATSP---LQGEMLAWGK 322
Query: 256 GGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQ 315
G RS RHGS G N ++ RS R+ KLV+YL + E + E + L+L+ D Q P+L+
Sbjct: 323 NGARSQNRHGSV-GSNGRTGRSGRIAKLVDYLHTADEMDKEFQLFLLLLPVDGQTIPNLE 381
Query: 316 QPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKER 353
+PYL C+P+LS+K L ++V+LQ + EE+E+ + +R
Sbjct: 382 KPYLSCRPTLSIKHLAQFVALQLSCEVEELEMYIRMDR 419
>gi|218189211|gb|EEC71638.1| hypothetical protein OsI_04070 [Oryza sativa Indica Group]
Length = 491
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/396 (50%), Positives = 272/396 (68%), Gaps = 20/396 (5%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 101 FIIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 160
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAF EEER+RNK+IQA+I + +RQSEA+ K+
Sbjct: 161 RRSLRDDPNYDALIAALYPDIDKYEEEELAFSEEERSRNKKIQATIEETIRRQSEAVGKK 220
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGS--EDNEDENDDNGGKDSSSNDE 194
R+ K TA+ F + +RN RT R + + GS ED E+ N + K+SSS D+
Sbjct: 221 RSTAKATATVFARKYRRNMRTRG-RGKTIAPDIAPTGSDNEDREEGNAIDTTKESSSADD 279
Query: 195 RSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPEMLAW 253
RS+++ P+R ++R R+S P+ + +SD G END L G+ES SP EMLAW
Sbjct: 280 RSSDLMPKRGRKRPASRAS-PARTIGSSDHGFEENDELIGGKESFTTSP---LRGEMLAW 335
Query: 254 GRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPS 313
G+ GTRS TRHGS G N + ++ R+ KLV++LR+ + + E ++ L+L+ D Q P+
Sbjct: 336 GKNGTRSQTRHGSVGGSNGRMAKGGRVAKLVDHLRTTDDMDKEFNLYLVLLPLDEQSMPN 395
Query: 314 LQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLD-AKGNQSTPIPTT----- 367
L++PY+ C+P+LS++ L ++++LQ Q EE++I M R+D G+ +T TT
Sbjct: 396 LEKPYVSCRPTLSIRHLVQFIALQLSRQVEELDIFM---RIDHCNGSVTTQDCTTGVAKM 452
Query: 368 ---DQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
D L+ + + L+ L + TS+ L L Y K
Sbjct: 453 RLSDGLERIREDKLLSELHPSFTSHHGDLELLYALK 488
>gi|297597780|ref|NP_001044517.2| Os01g0796700 [Oryza sativa Japonica Group]
gi|53792319|dbj|BAD53026.1| putative ring finger protein 1 [Oryza sativa Japonica Group]
gi|215767809|dbj|BAH00038.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619392|gb|EEE55524.1| hypothetical protein OsJ_03751 [Oryza sativa Japonica Group]
gi|255673777|dbj|BAF06431.2| Os01g0796700 [Oryza sativa Japonica Group]
Length = 489
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 200/396 (50%), Positives = 270/396 (68%), Gaps = 20/396 (5%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L EIRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 99 FIIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 158
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAF EEER+RNK+IQA+I + +RQSEA+ K+
Sbjct: 159 RRSLRDDPNYDALIAALYPDIDKYEEEELAFSEEERSRNKKIQATIEETIRRQSEAVGKK 218
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGS--EDNEDENDDNGGKDSSSNDE 194
R+ K TA+ F + +RN RT R + + GS ED E+ N + K+SSS D+
Sbjct: 219 RSTAKATATVFARKYRRNMRTRG-RGKTIAPDIAPTGSDNEDREEGNAIDTTKESSSADD 277
Query: 195 RSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPEMLAW 253
RS+++ P+R ++R R+S P+ + +SD END L G+ES SP EMLAW
Sbjct: 278 RSSDLMPKRGRKRPASRAS-PARTIGSSDHVFEENDELIGGKESFTTSP---LRGEMLAW 333
Query: 254 GRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPS 313
G+ GTRS TRHGS G N + ++ R+ KLV++LR+ + + E ++ L+L+ D Q P+
Sbjct: 334 GKNGTRSQTRHGSVGGSNGRMAKGGRVAKLVDHLRTTDDMDKEFNLYLVLLPLDEQSMPN 393
Query: 314 LQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLD-AKGNQSTPIPTT----- 367
L +PY+ C+P+LS++ L ++++LQ Q EE++I M R+D G+ +T TT
Sbjct: 394 LDKPYISCRPTLSIRHLVQFIALQLSRQVEELDIFM---RIDHCNGSVTTQDCTTGVAKM 450
Query: 368 ---DQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
D L+ + + L+ L + TS+ L L Y K
Sbjct: 451 RLSDGLERIREDKLLSELHPSFTSHHGDLELLYALK 486
>gi|226496665|ref|NP_001147987.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
gi|194707960|gb|ACF88064.1| unknown [Zea mays]
gi|195614998|gb|ACG29329.1| ribosomal protein L11 methyltransferase containing protein [Zea
mays]
Length = 494
Score = 318 bits (814), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 186/345 (53%), Positives = 243/345 (70%), Gaps = 9/345 (2%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G F V+L ++RK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACR
Sbjct: 99 GVMDEFTLVKLVDVRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACR 158
Query: 72 THCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE 131
THCASRRSLRDDPNYDALI ALYPDIDKYEEEELAF EEERTRNK+IQ SIA+ F+RQ+E
Sbjct: 159 THCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKRIQESIAETFRRQTE 218
Query: 132 ALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSS 191
ALVK+R+ K T + + +RN R R + +D+ +EN D+G K+SSS
Sbjct: 219 ALVKKRSTVKATDAASTRKTRRNMRPRRRGRISSPDIAPTDFDDDDREENGDDGSKESSS 278
Query: 192 NDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNP--- 248
D+ S +VRP+R +R R S P+ + N+D +ND +S G + +P
Sbjct: 279 VDDHSPDVRPKRSRRWPMPRRS-PAKAIGNTDNSIEDND-----DSGGARDFMTASPLRG 332
Query: 249 EMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADT 308
EMLAWG+ GTRS TRHG++SG + + RS R+ KLV+ R+ + ++EL++ L+L+ D
Sbjct: 333 EMLAWGKNGTRSQTRHGNSSGSSGRMGRSGRVAKLVDQFRNADDFDNELNLYLVLLPLDG 392
Query: 309 QCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKER 353
Q P L++PYL C P+LSV+ LC++V+LQ Q +EVEI + K +
Sbjct: 393 QSVPKLEKPYLSCLPTLSVRHLCQFVALQLSRQPKEVEIYIRKSK 437
>gi|357125426|ref|XP_003564395.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
[Brachypodium distachyon]
Length = 481
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 255/395 (64%), Gaps = 18/395 (4%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L EIRK+ QCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 91 FILVKLAEIRKEFQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 150
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ LYPDIDKYEEEELAF EEE+TRNK+IQA+I + ++QSEA+ K+
Sbjct: 151 RRSLRDDPNYDALIATLYPDIDKYEEEELAFSEEEKTRNKKIQATIEETIRKQSEAIGKK 210
Query: 137 RTPGKDTASPFMTRPQRN--PRTAHLRRRRNSRGTEHQGSEDN--EDENDDNGGKDSSSN 192
R+ K TA+ F + +RN PR R + + T S+D E+ N + K+SSS
Sbjct: 211 RSTAKATANAFARKYRRNIQPRG---RGKTIALDTSLAVSDDVDIEEGNANGASKESSSA 267
Query: 193 DERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEN-DLEVGRESRGISPGLVWNPEML 251
D S ++ +R +R SS P+ + +D G EN +L G+ES SP EML
Sbjct: 268 DNHSPDLMQKRGSKRPASLSS-PARTIGTTDHGIEENGELVSGKESFTSSP---LRGEML 323
Query: 252 AWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCA 311
AWG+ GTRS TR+G+ G N + + R +KLVE+LR+ E + E ++ L+L+ D Q
Sbjct: 324 AWGKNGTRSQTRYGNIGGLNGRLGKGGRGSKLVEHLRTTNEMDKEFNLYLILLPLDGQTT 383
Query: 312 PSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTP------IP 365
PSL++PY+ C P++S++ L ++++LQ + EE+EI + L+ P +
Sbjct: 384 PSLEKPYVSCGPTVSIRHLVQFLALQLSRKVEELEIYIRMGLLNRSVTMLDPTSVETKLH 443
Query: 366 TTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
D L+ L + L+ L ++ S L L Y K
Sbjct: 444 QFDNLERLSEDKLLSDLHLSFASGHSDLELLYALK 478
>gi|414870716|tpg|DAA49273.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 467
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 198/390 (50%), Positives = 258/390 (66%), Gaps = 18/390 (4%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FV V+L ++RK+VQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 87 FVPVKLSDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 146
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAF+EEE RNKQIQASIA+ F++QSE ++ R
Sbjct: 147 RRSLRDDPNYDALIAALYPDIDKYEEEELAFNEEENDRNKQIQASIAEAFRKQSE-VIGR 205
Query: 137 RTPGKDTASPFMTRPQRNPR----TAHLRRR--RNSRGTEHQGSEDNEDENDDNGGKDSS 190
++ K TA+ F+ R +RN R + R R +S SED ED N ++ K++S
Sbjct: 206 KSTAKATAAAFVRRSRRNIRPNGQNTYFRGRGKASSDDVALACSEDEEDGNGESCSKEAS 265
Query: 191 SNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEM 250
S +E S E + +R + RSS P+ + + ++D+ + RE+ SP +
Sbjct: 266 SAEESSPEKKQKRLPKWPTPRSS-PARACNDEVASDEKDDVGISRENFSTSP-------L 317
Query: 251 LAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQC 310
AWG+ GTRS TRH S SG N + + R+ KLVE LR+ +N E DV L L+ D Q
Sbjct: 318 RAWGKNGTRSQTRHSSFSGSNGRMVKGGRMIKLVECLRNSDDNEGERDVHLCLLPLDGQT 377
Query: 311 APSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQL 370
AP+L++ YLCC P+LS+KQLC++V+ QT + EEVE+ +K + +T P +L
Sbjct: 378 APNLEKSYLCCGPTLSIKQLCQFVASQTSHKDEEVEMYALKPSCSKPVSTNTCGPDKARL 437
Query: 371 QILEGQETLAGLRVNHTSNTDHLILAYRQK 400
G+E L+ LR + T L L Y K
Sbjct: 438 A---GEERLSDLRSSFTFPNGVLELVYAIK 464
>gi|326490487|dbj|BAJ84907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/338 (52%), Positives = 228/338 (67%), Gaps = 17/338 (5%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L +IRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHC S
Sbjct: 108 FILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKS 167
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPN+DALI ALYPDIDKYEEEELAF EEE+TRNK+IQ SIA+ F+RQ+EALVK+
Sbjct: 168 RRSLRDDPNFDALILALYPDIDKYEEEELAFGEEEKTRNKKIQDSIAETFRRQTEALVKK 227
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGS-----EDNEDENDDNGGKDSSS 191
R+ K AS TR LR ++ R + + +D +EN ++G K+SSS
Sbjct: 228 RSNAKAIASSRKTR-------GSLRTKKRGRTSSPDNAPTDIDDDEREENGNDGSKESSS 280
Query: 192 NDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEN-DLEVGRESRGISPGLVWNPEM 250
D+RS +V+ +R RR + S P+ + D EN DL R+ SP EM
Sbjct: 281 VDDRSPDVK-MKRARRWPVPRSSPAKTIGGVDSSYEENDDLGGARDILATSP---LRGEM 336
Query: 251 LAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQC 310
LAWG+ GTRS TRHG+ G + + + R+ KLV++LR+ E + + ++ L L D Q
Sbjct: 337 LAWGKNGTRSQTRHGNPGGSSGRMVKGGRVAKLVDHLRNADEFDTKFNLYLALTPLDGQS 396
Query: 311 APSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEIL 348
P L++ YL CQP+ SV LC++V+ Q QA +IL
Sbjct: 397 MPKLEKSYLSCQPTFSVSHLCQFVAFQLSRQARGGDIL 434
>gi|357128851|ref|XP_003566083.1| PREDICTED: uncharacterized protein LOC100846593 [Brachypodium
distachyon]
Length = 917
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 190/399 (47%), Positives = 244/399 (61%), Gaps = 50/399 (12%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L +IRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHC S
Sbjct: 109 FIVVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKS 168
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPN+DALI ALYPDIDKYEEE IQ SIA+ F+RQ+EALVK+
Sbjct: 169 RRSLRDDPNFDALILALYPDIDKYEEE--------------IQESIAETFRRQTEALVKK 214
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNED--ENDDNGGKDSSSNDE 194
R+ K AS TR + RR R S D+ED EN ++G K+SSS D+
Sbjct: 215 RSTAKAIASSRKTRGNLRAK----RRGRTSSPDIVTSDIDDEDKEENGNDGSKESSSVDD 270
Query: 195 RSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNP---EML 251
RS +V+ +R +R R S PS + + DG ND ++G G+ L +P EM
Sbjct: 271 RSPDVKVKRARRWPVPRPS-PSKTIGSIDGTYEGND-DLG----GVRDILTTSPLRGEMP 324
Query: 252 AWGRGGTRSNT-RHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSA--DT 308
AWG+ GTRS T RHG++ G + + +S R+ K+V++LR N DE D +L LV + D
Sbjct: 325 AWGKNGTRSQTSRHGNSGGSSGRMVKSGRVAKMVDHLR----NADESDSKLYLVLSPLDG 380
Query: 309 QCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTD 368
Q P L++PYL C + SV LC++V+LQ QA+EVEI + K GN+ + TD
Sbjct: 381 QNMPKLEKPYLSCHSTFSVSHLCQFVALQLSRQAKEVEIYIRKN----PGNKCFAMKDTD 436
Query: 369 Q----------LQILEGQETLAGLRVNHTSNTDHLILAY 397
L+ L+ +E+LA L S L L Y
Sbjct: 437 AAEEKLDLFNGLERLKEEESLAELYPAFASRQGDLELMY 475
>gi|242088361|ref|XP_002440013.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
gi|241945298|gb|EES18443.1| hypothetical protein SORBIDRAFT_09g024430 [Sorghum bicolor]
Length = 449
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/344 (52%), Positives = 234/344 (68%), Gaps = 11/344 (3%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G F V+L ++RK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACR
Sbjct: 102 GVMDEFTLVKLVDVRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACR 161
Query: 72 THCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE 131
THCASRRSLRDDPNYDALI ALYPDIDKYEEEELAF EEERTRNK+IQ SIA+ F+RQ+E
Sbjct: 162 THCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKRIQESIAETFRRQTE 221
Query: 132 ALVKRRTP--GKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDS 189
ALVK+R+ G D AS TR PR + T+ +++ +EN D G KDS
Sbjct: 222 ALVKKRSTVKGTDAASTRKTRRNMRPRRRGRISSPDIAPTDFD--DEDREENGDVGSKDS 279
Query: 190 SSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPE 249
SS D+ S +VRP+R +R R S P+ + N+D +ND G +R E
Sbjct: 280 SSVDDHSPDVRPKRARRWPMPRRS-PAKTIGNTDNSIEDNDDSGG--ARDFVTASPLRGE 336
Query: 250 MLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQ 309
MLAWG+ GTRS TRHG+ SG + + + R+ KLV+ LR+ + + +L++ L+L+ D Q
Sbjct: 337 MLAWGKNGTRSQTRHGNTSGSSGRMGKGGRVAKLVDQLRNADDFDSKLNLYLVLLPLDGQ 396
Query: 310 CAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKER 353
P L++PYL C P+LSV+ LC+ + + L V++ V++R
Sbjct: 397 SVPKLEKPYLSCLPTLSVQHLCQVYGITSSL----VKMYGVEQR 436
>gi|224092904|ref|XP_002309746.1| predicted protein [Populus trichocarpa]
gi|222852649|gb|EEE90196.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/256 (66%), Positives = 204/256 (79%), Gaps = 6/256 (2%)
Query: 148 MTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRR 207
MTR QR RRRRNSRG++ QG ED EDENDDN GKDSSS D+RS EVR RRRKR+
Sbjct: 1 MTRSQRT-HRPISRRRRNSRGSDFQGYEDIEDENDDNIGKDSSSTDDRSTEVRQRRRKRQ 59
Query: 208 SGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSA 267
+SQPSSSA NS+GGC ENDL+ RE+RG+SPGLVWN EMLAWGRGGTRS+TRHG+
Sbjct: 60 R---TSQPSSSAVNSEGGCAENDLDSNRENRGLSPGLVWNTEMLAWGRGGTRSHTRHGNP 116
Query: 268 SGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSV 327
SGCN+K+SR+TRL+KLVEYLRSL E NDELD+ L L++ D AP+L+QPYLCC+PSLS+
Sbjct: 117 SGCNNKNSRNTRLSKLVEYLRSLDEKNDELDIHLKLITLDKHSAPTLKQPYLCCRPSLSI 176
Query: 328 KQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTT--DQLQILEGQETLAGLRVN 385
K LCEYV+ QT LQAEEVEIL+VK + + N T P D+LQIL+GQET+AGL+ +
Sbjct: 177 KHLCEYVAHQTTLQAEEVEILLVKGKHQSDENLPTKHPQIPMDELQILKGQETVAGLKAS 236
Query: 386 HTSNTDHLILAYRQKQ 401
+S+ DHLILAYRQK+
Sbjct: 237 CSSSRDHLILAYRQKE 252
>gi|4204310|gb|AAD10691.1| Hypothetical protein [Arabidopsis thaliana]
Length = 439
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 185/382 (48%), Positives = 244/382 (63%), Gaps = 57/382 (14%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
++ V+L +I KDVQC I II+KTRTVMECLHRFCRECIDKSMRLGNNECP CR HCAS
Sbjct: 91 YMVVDLADICKDVQCSIW--IIRKTRTVMECLHRFCRECIDKSMRLGNNECPTCRKHCAS 148
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPN+DALI+AL+ +IDK+EEEEL F +++ RNKQIQASIA++ QRQS+ALVKR
Sbjct: 149 RRSLRDDPNFDALIAALFKNIDKFEEEELNFRQDDEARNKQIQASIAQVSQRQSKALVKR 208
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERS 196
++ GK TA + RRRRN R E SE N+D++ + GKDSSS+
Sbjct: 209 KSVGKGTA----ILSRSRRSGGGSRRRRNCRNIEQDTSEANDDDDQNKRGKDSSSD---- 260
Query: 197 AEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVG--RESRGISPGLVWNPEMLAWG 254
E R+RK+RS ++QPSSS AN++ C N E R+SR ISP LVWN E++AWG
Sbjct: 261 -EPCERQRKKRS---ATQPSSSNANNNDNCAGNGTEQTHQRDSRVISPVLVWNSELIAWG 316
Query: 255 RGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSL 314
RGGTRSNTR G+ + + S R+ RL +LVEYL SL+ N+
Sbjct: 317 RGGTRSNTRQGN-NNQGAISKRNARLKRLVEYLGSLEGNS-------------------- 355
Query: 315 QQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILE 374
EYV+ L+AEEVE+L+ K+ GN++ +T+++Q L+
Sbjct: 356 ----------------VEYVARHLKLKAEEVELLVSKDGDTVIGNKT----STEKMQSLQ 395
Query: 375 GQETLAGLRVNHTSNTDHLILA 396
ET+A L+V+ S+ +++L
Sbjct: 396 DDETVAKLKVDCISSNGYMVLV 417
>gi|414880137|tpg|DAA57268.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/362 (46%), Positives = 227/362 (62%), Gaps = 14/362 (3%)
Query: 45 MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEE 104
MECLHRFCR+CIDKSMRLGNNECP+CRTHCASRRSLRDDPNYDALI+ALYPDIDKYEEEE
Sbjct: 1 MECLHRFCRDCIDKSMRLGNNECPSCRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEE 60
Query: 105 LAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRR 164
LAF+E+E TRN++IQ +I + F+RQS+A+ K+R+ K+T + F + +RN RT R
Sbjct: 61 LAFNEQEMTRNQKIQETIEETFRRQSQAIGKKRSIAKETGTAFARKYRRNMRTRGRGRTT 120
Query: 165 N-SRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSD 223
ED E EN + K SS D+ S ++R ++R R++ + P+ + +SD
Sbjct: 121 TPDIAPTSSNEEDREGENVNEVTKVPSSADDHSPDLR-QKRCRKTSTSQASPARNIGSSD 179
Query: 224 GGCIEND-LEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNK 282
END L +E SP EMLAWG+ GTRS RHGSA G N + RS R+ K
Sbjct: 180 HSFEENDELVAAKEILATSP---LRGEMLAWGKNGTRSQNRHGSA-GSNGRIGRSGRIAK 235
Query: 283 LVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQA 342
LV++L + E + E + L+L+ D Q P L++PYL CQP+LS++ L E ++LQ +
Sbjct: 236 LVDHLCNADEMDKEFQLYLVLLPVDGQTIPHLEKPYLSCQPTLSIQHLVELIALQLSRKV 295
Query: 343 EEVEILMVKERLDAK----GNQSTPIPTTDQLQILEGQETLAGLRVNHTSNTDHLILAYR 398
EE+E+ + R+D G+ + I D L+ L + L+ L + S+ L L Y
Sbjct: 296 EELEMYI---RMDGDHGSVGSMACSIGEFDGLERLREDKLLSELHPSFASSNGDLELRYA 352
Query: 399 QK 400
K
Sbjct: 353 LK 354
>gi|294462674|gb|ADE76882.1| unknown [Picea sitchensis]
Length = 475
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/425 (42%), Positives = 250/425 (58%), Gaps = 43/425 (10%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
+V V L IR+++QCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 52 YVLVNLAAIREEMQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 111
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+A+YPD+DKYE EE+A HEEE RN+QIQASIA F+RQSEA+ +R
Sbjct: 112 RRSLRDDPNYDALIAAIYPDLDKYEAEEMALHEEEEDRNRQIQASIADTFRRQSEAMTRR 171
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKD---SSSND 193
R K TA+ F+ + + R N+R D + G+D S S+D
Sbjct: 172 RRTAKATAAAFVRKAHGKFCGVQGQSRVNNRVKNRSKRPRRSSATDGDEGEDLKQSFSDD 231
Query: 194 ERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIE------------------NDLEVGR 235
E R RRKRR+G SS P +SA G E N EV R
Sbjct: 232 EEPQPRRWTRRKRRAG--SSLPETSADMDVGNGEEPDDINDEEAGENIQLVEYNQAEVSR 289
Query: 236 ESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYL--RSLQEN 293
ES SPG N E LAWG+GG RS+ ++ S G + K++R T + K+ +YL ++ +E
Sbjct: 290 ESTDASPGNARNAEGLAWGKGGARSHMKYASVRGTHVKNNRCTYVAKMADYLLTKAHEEM 349
Query: 294 NDELDVRLMLVSADT-QCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKE 352
+ D+ L+ + + PSL++P+LCC+P+L+V+ +C+++S + E++E+++ K+
Sbjct: 350 ETKYDIHFTLLPFENEEKIPSLRRPHLCCRPTLTVEHICKFLSRFCTVPPEDLELVVEKQ 409
Query: 353 RLDAKGNQSTPI-----------------PTTDQLQILEGQETLAGLRVNHTSNTDHLIL 395
A Q+ I + ++L + TLA + T +L+L
Sbjct: 410 NNSANLGQNGKILQHSGKLGKGKAVLGASDSEKVAEVLNQEATLAEIFTACTECRGNLVL 469
Query: 396 AYRQK 400
YR K
Sbjct: 470 MYRCK 474
>gi|297724223|ref|NP_001174475.1| Os05g0497650 [Oryza sativa Japonica Group]
gi|255676466|dbj|BAH93203.1| Os05g0497650 [Oryza sativa Japonica Group]
Length = 514
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 198/293 (67%), Gaps = 13/293 (4%)
Query: 64 NNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIA 123
NNECPACRTHCASRRSLRDDPNYDALI ALYPDIDKYEEEELAF EEERTRNK+IQASIA
Sbjct: 74 NNECPACRTHCASRRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQASIA 133
Query: 124 KIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNE----D 179
+ F+RQSEALVK+R+ K T S R + N R +RR + + DNE D
Sbjct: 134 ETFRRQSEALVKKRSVAKATGSTITRRTRGNMRA----KRRGRTSSPDIVATDNEDEDRD 189
Query: 180 ENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIE-NDLEVGRESR 238
EN + G K+SSS D+RS +VR ++R RR + S P+ S D + +DL GR+
Sbjct: 190 ENGNEGSKESSSVDDRSPDVR-QKRVRRWPVPRSSPAKSIGGIDSSFEDIDDLGSGRDIM 248
Query: 239 GISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELD 298
SP EMLAWG+ GTRS TRHG++ G + + ++ R+ KLVEYLR+ E +++ +
Sbjct: 249 STSP---LRGEMLAWGKNGTRSQTRHGNSGGSSGRMAKGGRVTKLVEYLRNTDEFDNKFN 305
Query: 299 VRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK 351
+ L+L+ + Q P L++PYL CQP+ SV+ LC++V+LQ A+EVEI + K
Sbjct: 306 LYLVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIFIRK 358
>gi|218197034|gb|EEC79461.1| hypothetical protein OsI_20471 [Oryza sativa Indica Group]
Length = 451
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/184 (70%), Positives = 148/184 (80%), Gaps = 2/184 (1%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
F+ V+L +IRK+VQCPICLGII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCAS
Sbjct: 100 FILVKLMDIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCAS 159
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI ALYPDIDKYEEEELAF EEERTRNK+IQASIA+ F+RQSEALVK+
Sbjct: 160 RRSLRDDPNYDALILALYPDIDKYEEEELAFSEEERTRNKKIQASIAETFRRQSEALVKK 219
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNE-DENDDNGGKDSSSNDER 195
R+ K T S R + N R A R R +S +ED + DEN + G K+SSS D+R
Sbjct: 220 RSVAKATGSTITRRTRGNMR-AKRRGRTSSPDIVATDNEDEDRDENGNEGSKESSSVDDR 278
Query: 196 SAEV 199
S +
Sbjct: 279 SPDF 282
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 289 SLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEIL 348
S+ + + + ++ L+L+ + Q P L++PYL CQP+ SV+ LC++V+LQ A+EVEI
Sbjct: 274 SVDDRSPDFNLYLVLLPLNGQSMPKLEKPYLSCQPTFSVRHLCQFVALQLSRHAKEVEIF 333
Query: 349 MVK 351
+ K
Sbjct: 334 IRK 336
>gi|168065332|ref|XP_001784607.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663839|gb|EDQ50582.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 214/384 (55%), Gaps = 65/384 (16%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDA 88
+QCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPN+DA
Sbjct: 1 MQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDA 60
Query: 89 LISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFM 148
L++A+YPD+D+YEEEELAF E+E N+QIQA+IA F+RQSEA+ +RRT K TA+ +
Sbjct: 61 LVAAIYPDLDEYEEEELAFFEDEALVNRQIQANIADTFKRQSEAIARRRTASKATAAAIV 120
Query: 149 TRPQRNPRTAHLRRR-------------------------RNSRG------TEHQGS--- 174
+ N R+ R+R RN R +GS
Sbjct: 121 RKAHGNFRSVQNRQRGRGRGSRGGRRSRSGVLCELWPRLWRNCRKLLVAELMFSEGSARY 180
Query: 175 EDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIR--------SSQPSSSAANSD--- 223
ED++D DD+ ++S D+ +E P ++RR+ ++ S S SAA D
Sbjct: 181 EDDDDFYDDDKADTATSGDDTQSEPEPNPKRRRAKVQTYSSGEENSENESLSAATRDQHE 240
Query: 224 -----GGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGC-------N 271
G + RES + + +W + GTRS +R+GS SG +
Sbjct: 241 APASFSGDESPTDSLARESDADASPTNVEGMLKSWAK-GTRS-SRYGSVSGVPVANGNRS 298
Query: 272 SKSSRSTRLNKLVEYLRSLQENNDELDVRLMLV-----SADTQCAPSLQQPYLCCQPSLS 326
KS T+ + + DE V L L S D PSL++P+LCC P ++
Sbjct: 299 MKSLPRTKELADALLADARADKEDEFVVHLNLQPLIDGSDDEDTLPSLKRPHLCCPPKMT 358
Query: 327 VKQLCEYVSLQ-TPLQAEEVEILM 349
V LC++++ + +P ++EIL+
Sbjct: 359 VHHLCKFLATRLSPPPEADLEILV 382
>gi|242039065|ref|XP_002466927.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
gi|241920781|gb|EER93925.1| hypothetical protein SORBIDRAFT_01g016826 [Sorghum bicolor]
Length = 207
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/181 (69%), Positives = 145/181 (80%), Gaps = 7/181 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FV V+LP++RK+VQCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS
Sbjct: 27 FVPVKLPDVRKEVQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 86
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
RRSLRDDPNYDALI+ALYPDIDKYEEEELAF+EEE RNKQIQASIA+ F++QSE ++ R
Sbjct: 87 RRSLRDDPNYDALIAALYPDIDKYEEEELAFNEEENDRNKQIQASIAEAFRKQSE-VIGR 145
Query: 137 RTPGKDTASPFMTRPQRNPR------TAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSS 190
++ K TA+ F+ R +RN R R R NS GSED ED N +N K++S
Sbjct: 146 KSTAKATAAAFVRRSRRNIRPNGQNTYFRGRGRANSDDVALAGSEDEEDGNGENCSKEAS 205
Query: 191 S 191
S
Sbjct: 206 S 206
>gi|413934828|gb|AFW69379.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 150/222 (67%), Gaps = 11/222 (4%)
Query: 36 GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYP 95
GII+KTRTVMECLHRFCR+CIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI+ALYP
Sbjct: 122 GIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYP 181
Query: 96 DIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNP 155
DIDKYEEEE AF E+ER +NK+IQ +I + F+RQS+A+ K+R+ K TA+ F R
Sbjct: 182 DIDKYEEEEFAFSEQERIQNKKIQETIEETFRRQSDAIGKKRSMAKATATAFA----RKY 237
Query: 156 RTAHLRRRRNSRGTEHQGSEDNE--DENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSS 213
R R R GS + E + N ++ SS D+ S ++R +R ++RSG + S
Sbjct: 238 RRTRGRVRTIPPDITPTGSSEEERGEGNSKETIREQSSTDDHSPDLRQKRCRKRSGPQGS 297
Query: 214 QPSSSAANSDGGCIEND-LEVGRESRGISPGLVWNPEMLAWG 254
P+ + + D END L G+E SP EMLAWG
Sbjct: 298 -PAGTIGSIDYSFEENDELVGGKEILATSPL---QGEMLAWG 335
>gi|77551611|gb|ABA94408.1| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
Length = 893
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 149/265 (56%), Gaps = 34/265 (12%)
Query: 7 PLKFSGFFCRF---VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 63
P S +F F + V+L +IRK+VQCPICLGII+K R + ECLHRFCR+CI+KSM LG
Sbjct: 72 PFHVSNYFLHFTMFILVKLMDIRKEVQCPICLGIIQKARIITECLHRFCRDCIEKSMWLG 131
Query: 64 NNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIA 123
N+ECPACRT AS SL+ DPN+DALI LYPD+ K +EEE EE+T K+IQAS
Sbjct: 132 NDECPACRT-LASSHSLKVDPNFDALILTLYPDLHK-DEEEELAFTEEKTCRKKIQASTD 189
Query: 124 KIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGT-----EHQGSEDNE 178
+ R+ EAL K+R+ K S +R Q N L R+R G G +D E
Sbjct: 190 EAPHRRKEALGKKRSAAKAIGS---SRSQGN----MLARKRGHIGFPDIVPSKVGGKDRE 242
Query: 179 DENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESR 238
END++G + S DE S +++ ++R RR + S P+ G I L+ +R
Sbjct: 243 -ENDNSGCDEWSLFDEYSQDIK-KKRARRCLVPRSSPA-------GHKISTTLKKDAHAR 293
Query: 239 GISPGLVWN--------PEMLAWGR 255
G +W P++ W R
Sbjct: 294 SFECGQIWALYSEVDKFPKLYGWIR 318
>gi|168046374|ref|XP_001775649.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673067|gb|EDQ59596.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 812
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/137 (59%), Positives = 99/137 (72%), Gaps = 18/137 (13%)
Query: 2 AKYNIPLKFSGFF--CRF----VFVE---LPEIRKDVQCPI---------CLGIIKKTRT 43
A +P + S ++ C+ VFV +P R DV C GII+KTRT
Sbjct: 179 AALELPWEASAWWRVCKMIPDSVFVARVTVPRFRGDVMSSNQVHHAVLLRCEGIIRKTRT 238
Query: 44 VMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEE 103
VMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPN+DAL++A+YPD+D+YEEE
Sbjct: 239 VMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALVAAIYPDLDEYEEE 298
Query: 104 ELAFHEEERTRNKQIQA 120
ELAF E+E N+Q++A
Sbjct: 299 ELAFFEDEALMNRQLKA 315
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 116 KQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTA 158
+ IQA+IA F+RQSEA+ +RRT K TA+ + + N R+
Sbjct: 388 RHIQANIADTFKRQSEAIARRRTASKATAAAIVRKAHGNFRSV 430
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 305 SADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQ-TPLQAEEVEILM 349
S D PSL++P+LCC P+++V LC++++ + +P ++EIL+
Sbjct: 701 SDDEDTLPSLKRPHLCCPPNMTVHHLCKFLATRLSPPPEADLEILV 746
>gi|302754330|ref|XP_002960589.1| hypothetical protein SELMODRAFT_8697 [Selaginella moellendorffii]
gi|300171528|gb|EFJ38128.1| hypothetical protein SELMODRAFT_8697 [Selaginella moellendorffii]
Length = 77
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/77 (87%), Positives = 74/77 (96%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V L EIRK++QCPICLGII+KTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR
Sbjct: 1 ITVYLSEIRKEMQCPICLGIIRKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 60
Query: 78 RSLRDDPNYDALISALY 94
RSLRDDPN+D+LI+ALY
Sbjct: 61 RSLRDDPNFDSLIAALY 77
>gi|357500025|ref|XP_003620301.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|355495316|gb|AES76519.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 198
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
Query: 13 FFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
CR+V ++L I + ++CPIC GI++KT+T+ +CLHRFC ECI+K MR G NECP CRT
Sbjct: 22 LLCRYVSIDLSNIHE-IECPICFGILRKTKTIRKCLHRFCGECIEKCMRSGKNECPICRT 80
Query: 73 HCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
HC ++ SLRDDPNYDALI+ L+PDIDK+E+EELA +EE ++ S+ +
Sbjct: 81 HCPTQLSLRDDPNYDALIALLHPDIDKFEKEELALLKEEFPHLSIVEKSVEVV 133
>gi|357475901|ref|XP_003608236.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|87240735|gb|ABD32593.1| Zinc finger, RING-type [Medicago truncatula]
gi|355509291|gb|AES90433.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 252
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 69/84 (82%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYD 87
+++CPIC GII+KT+T+ ECLHRFC ECI+K MR G NECP CRTHC + SLRDDPNYD
Sbjct: 95 EIECPICFGIIRKTKTIRECLHRFCEECINKCMRFGKNECPVCRTHCPDQLSLRDDPNYD 154
Query: 88 ALISALYPDIDKYEEEELAFHEEE 111
ALI+ L PDIDK+E+EEL +EE
Sbjct: 155 ALIALLCPDIDKFEKEELTLLKEE 178
>gi|222616200|gb|EEE52332.1| hypothetical protein OsJ_34363 [Oryza sativa Japonica Group]
Length = 490
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
+IRK+VQCPICLGII+K R + ECLHRFCR+CI+KSMRLGN+ECPACRT AS SL+ D
Sbjct: 2 DIRKEVQCPICLGIIQKARIITECLHRFCRDCIEKSMRLGNDECPACRTP-ASSHSLKVD 60
Query: 84 PNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDT 143
PN+DALI LYPD+ K +EEE EE+T +K+IQAS + R+ EAL K+ + K
Sbjct: 61 PNFDALILTLYPDLHK-DEEEELAFTEEKTCHKKIQASTDEAPHRRKEALGKKSSAAKAI 119
Query: 144 AS 145
S
Sbjct: 120 GS 121
>gi|440791566|gb|ELR12804.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 561
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYD 87
++ CPICLGI+++T TVMECLHRFC ECI K +R G ECP CR HC+SRR LR DPN+D
Sbjct: 127 ELTCPICLGIMRQTMTVMECLHRFCDECISKCLRWGKKECPTCRVHCSSRRHLRPDPNFD 186
Query: 88 ALISALYPDIDKYEEEELAFHEE--ERTRNKQIQASIAKIFQRQSEA 132
ALI+ +YP++D+YE +E F + +R K + S+ K RQ A
Sbjct: 187 ALIATVYPNLDEYEAQEQEFIADINKRMNRKSLTDSVEKGLMRQMAA 233
>gi|413949757|gb|AFW82406.1| ribosomal protein L11 methyltransferase containing protein isoform
1 [Zea mays]
gi|413949758|gb|AFW82407.1| hypothetical protein ZEAMMB73_618249 [Zea mays]
Length = 253
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 117/182 (64%), Gaps = 9/182 (4%)
Query: 175 EDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVG 234
+D+ +EN D+G K+SSS D+ S +VRP+R +R R S P+ + N+D +ND
Sbjct: 21 DDDREENGDDGSKESSSVDDHSPDVRPKRSRRWPMPRRS-PAKAIGNTDNSIEDND---- 75
Query: 235 RESRGISPGLVWNP---EMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQ 291
+S G + +P EMLAWG+ GTRS TRHG++SG + + RS R+ KLV+ R+
Sbjct: 76 -DSGGARDFMTASPLRGEMLAWGKNGTRSQTRHGNSSGSSGRMGRSGRVAKLVDQFRNAD 134
Query: 292 ENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVK 351
+ ++EL++ L+L+ D Q P L++PYL C P+LSV+ LC++V+LQ Q +EVEI + K
Sbjct: 135 DFDNELNLYLVLLPLDGQSVPKLEKPYLSCLPTLSVRHLCQFVALQLSRQPKEVEIYIRK 194
Query: 352 ER 353
+
Sbjct: 195 SK 196
>gi|345486958|ref|XP_001608228.2| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nasonia
vitripennis]
Length = 379
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 121/244 (49%), Gaps = 37/244 (15%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEE---ERTRNKQIQASIAKI------FQRQSEALVK 135
N+D LIS +YP D+YE H+E + N QA++ Q Q+
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQERVLAKLNNSHSQAALVNSITEGIKLQSQNRPQRS 155
Query: 136 RRTPGK-----DTAS----PFMTRPQR-NPRTAHLRRRRNSRGTEHQGSEDNEDENDDNG 185
R+ + +TAS P ++ P NP + +S+G Q S NG
Sbjct: 156 RKNANEPENTNNTASYNNTPNVSAPTTPNPAVIAANQSDSSQGAIGQSS---------NG 206
Query: 186 GKDSSSNDERSAEV--RPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPG 243
G +S N + V P+ KR+ +++S+ SS+A ++ G ND V E G S
Sbjct: 207 GSTTSRNSTTPSPVPSNPKPAKRQKSLQNSENDSSSAEAETGG--NDSMVDTEGEGSSEP 264
Query: 244 LVWN 247
L+ N
Sbjct: 265 LMLN 268
>gi|345486956|ref|XP_003425596.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 3 [Nasonia
vitripennis]
Length = 389
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 120/245 (48%), Gaps = 29/245 (11%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEE---ERTRNKQIQA----SIAKIFQRQSEALVKRR 137
N+D LIS +YP D+YE H+E + N QA SI + + QS+ +R
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQERVLAKLNNSHSQAALVNSITEGIKLQSQNRPQRS 155
Query: 138 TPG-------KDTAS----PFMTRPQR-NPRTAHLRRRRNSRGTEHQGSEDNEDEN---D 182
+TAS P ++ P NP + +S+G Q S EN
Sbjct: 156 RKNANEPENTNNTASYNNTPNVSAPTTPNPAVIAANQSDSSQGAIGQSSNGGSRENHSTT 215
Query: 183 DNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISP 242
NG +S P+ KR+ +++S+ SS+A ++ G ND V E G S
Sbjct: 216 SNGTTSRNSTTPSPVPSNPKPAKRQKSLQNSENDSSSAEAETGG--NDSMVDTEGEGSSE 273
Query: 243 GLVWN 247
L+ N
Sbjct: 274 PLMLN 278
>gi|348676854|gb|EGZ16671.1| hypothetical protein PHYSODRAFT_345983 [Phytophthora sojae]
Length = 407
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ D+ CPICLGIIK+T VMECLHRFC +CI ++R ECP+CR H S+RSLR D
Sbjct: 75 QLNADLTCPICLGIIKETMVVMECLHRFCGDCISTAIRQSKRECPSCRIHIPSKRSLRPD 134
Query: 84 PNYDALISALYPDIDKYE-EEELAFHEEERTRN 115
PN+DALIS ++P++ ++E E+L ++ RTR+
Sbjct: 135 PNFDALISKIHPNLAEFERNEDLIIQQQNRTRH 167
>gi|428167576|gb|EKX36533.1| hypothetical protein GUITHDRAFT_43965, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 58/77 (75%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
CPICL I++ T T MECLHRFC+ECI+K +RLG ECP CR +SRR+LR DP +D LI
Sbjct: 1 CPICLSIVRSTHTFMECLHRFCQECIEKYLRLGQKECPKCRVKVSSRRALRADPQFDKLI 60
Query: 91 SALYPDIDKYEEEELAF 107
A YPDID YEE+E F
Sbjct: 61 QAFYPDIDAYEEKEEEF 77
>gi|193688279|ref|XP_001947251.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 335
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
I ++ CPICL ++KKT T ECLHRFC ECI ++R GN ECP CR S+RSLR DP
Sbjct: 41 IHNELMCPICLDVLKKTMTTKECLHRFCSECIVTALRSGNKECPTCRKKLVSKRSLRADP 100
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D +IS +YP++D+YE ++
Sbjct: 101 NFDLIISKIYPNLDEYEAQQ 120
>gi|301101684|ref|XP_002899930.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102505|gb|EEY60557.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 388
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 25/203 (12%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ D+ CPICLGIIK+T VMECLHRFC ECI ++R N ECP+CR H S+RSLR D
Sbjct: 70 QLNADLTCPICLGIIKETMVVMECLHRFCGECISTAIRHSNRECPSCRIHIPSKRSLRPD 129
Query: 84 PNYDALISALYPDIDKYEEEELAFHEE-ERTRNKQIQASIAKIFQRQSEALVKR----RT 138
N+DALI ++P++ ++E E E+ RTR+ + + S+A +R +T
Sbjct: 130 ANFDALIRKIHPNLAEFERNEDQIIEKVNRTRHFHNAYTESARMGVLSQAATRRNGRKKT 189
Query: 139 PGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAE 198
G +AS + P P + E + S D ND ++S DE +
Sbjct: 190 EGATSAS---SSPTNTP---------SPPVGEKRDSPDGGSPNDTAPSSAAASEDESA-- 235
Query: 199 VRPRRRKRRSGIRSSQPSSSAAN 221
++++ I +S+P+ + A+
Sbjct: 236 ------RKKAKIAASKPADTVAD 252
>gi|383865665|ref|XP_003708293.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Megachile
rotundata]
Length = 368
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 117/238 (49%), Gaps = 35/238 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE-ALVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AK+ + S+ ALV T G
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQER---------VLAKLNKSHSQAALVNSITEGIKL 146
Query: 144 ASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGG--------------KDS 189
S RPQR+ + ++ S T + S++ N ++S
Sbjct: 147 QS--QNRPQRSRK--NVEPENASNATSYNNSQNVSAPATPNPSNTANQSDSSQSTTSRNS 202
Query: 190 SSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWN 247
++ A P+ KR+ +++S+ SS+A ++ G D V E G S L+ N
Sbjct: 203 TTPSPNPANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLMLN 258
>gi|108864542|gb|ABA94487.2| Zinc finger, C3HC4 type family protein [Oryza sativa Japonica
Group]
Length = 830
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 79/111 (71%), Gaps = 2/111 (1%)
Query: 35 LGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALY 94
L II+K R + ECLHRFCR+CI+KSMRLGN+ECPACRT AS SL+ DPN+DALI LY
Sbjct: 36 LSIIQKARIITECLHRFCRDCIEKSMRLGNDECPACRTP-ASSHSLKVDPNFDALILTLY 94
Query: 95 PDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTAS 145
PD+ K +EEE EE+T +K+IQAS + R+ EAL K+ + K S
Sbjct: 95 PDLHK-DEEEELAFTEEKTCHKKIQASTDEAPHRRKEALGKKSSAAKAIGS 144
>gi|291229732|ref|XP_002734826.1| PREDICTED: ring finger protein 2-like [Saccoglossus kowalevskii]
Length = 300
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC+ECI ++R GN ECP CR SRRSLR DP
Sbjct: 46 LHSELMCPICLDMLKNTMTTKECLHRFCQECITTALRSGNKECPTCRKKLVSRRSLRPDP 105
Query: 85 NYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQS 130
N+DALIS +YP D+YE +E+L + + +Q SI + + Q+
Sbjct: 106 NFDALISKIYPSRDEYEAQQEKLLARLNQHHNQQALQNSIEEGLKLQA 153
>gi|322796367|gb|EFZ18908.1| hypothetical protein SINV_06659 [Solenopsis invicta]
Length = 379
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 42/247 (17%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE-ALVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AK+ + S+ ALV T G
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQER---------VLAKLNKSHSQAALVNSITEGIKL 146
Query: 144 ASPFMTRPQRNPRTAHLRRRRN-----------SRGTEHQGSEDNEDEND---------D 183
S RPQR+ + A+ + S T S + +++D +
Sbjct: 147 QS--QNRPQRSRKNANESENASNATSYNNTPNISAPTTPNPSSNVANQSDSSQSATGPLN 204
Query: 184 NGG---KDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGI 240
+GG ++S++ A P+ KR+ +++S+ SS+A ++ G D V E G
Sbjct: 205 SGGTTSRNSTTPSPNPANQIPKPSKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGP 262
Query: 241 SPGLVWN 247
S L+ N
Sbjct: 263 SEPLMLN 269
>gi|345486954|ref|XP_003425595.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nasonia
vitripennis]
Length = 401
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 120/257 (46%), Gaps = 41/257 (15%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEE---ERTRNKQIQA----SIAKIFQRQSEALVKRR 137
N+D LIS +YP D+YE H+E + N QA SI + + QS+ +R
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQERVLAKLNNSHSQAALVNSITEGIKLQSQNRPQRS 155
Query: 138 TPG-------KDTAS----PFMTRPQR-NPRTAHLRRRRNSRGTEHQGSEDNEDENDD-- 183
+TAS P ++ P NP + +S+G Q S EN
Sbjct: 156 RKNANEPENTNNTASYNNTPNVSAPTTPNPAVIAANQSDSSQGAIGQSSNGGSRENHSTT 215
Query: 184 -------------NGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIEND 230
+G +S P+ KR+ +++S+ SS+A ++ G ND
Sbjct: 216 SNGVPQPSISPAVSGTTSRNSTTPSPVPSNPKPAKRQKSLQNSENDSSSAEAETGG--ND 273
Query: 231 LEVGRESRGISPGLVWN 247
V E G S L+ N
Sbjct: 274 SMVDTEGEGSSEPLMLN 290
>gi|66523966|ref|XP_393984.2| PREDICTED: e3 ubiquitin-protein ligase RING2-A isoform 1 [Apis
mellifera]
Length = 403
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 11/232 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 64 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 123
Query: 85 NYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR-RTPGK 141
N+D LIS +YP D+YE +E + + + SI + + QS+ +R R
Sbjct: 124 NFDLLISKIYPSRDEYEAHQERVLAKLNKSHSQAALVNSITEGIKLQSQNRSQRSRKNAN 183
Query: 142 DTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDE---NDDNGG---KDSSSNDER 195
++ + N + A N+ +Q N+ +GG ++S++
Sbjct: 184 ESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTGPLNNSSGGTTSRNSTTPSPN 243
Query: 196 SAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWN 247
A P+ KR+ +++S+ SS+A ++ G D V E G S L+ N
Sbjct: 244 PANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLMLN 293
>gi|357472141|ref|XP_003606355.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
gi|355507410|gb|AES88552.1| E3 ubiquitin-protein ligase RING1 [Medicago truncatula]
Length = 91
Score = 109 bits (272), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/64 (76%), Positives = 56/64 (87%)
Query: 36 GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYP 95
GII+KTRT MEC+HRFC+ CIDK MR G NECP CRTH SRR+LRDDPNYDALI+A+YP
Sbjct: 5 GIIRKTRTSMECMHRFCKVCIDKCMRRGTNECPTCRTHFPSRRALRDDPNYDALIAAIYP 64
Query: 96 DIDK 99
+IDK
Sbjct: 65 NIDK 68
>gi|357620029|gb|EHJ72363.1| putative ring finger protein 2 isoform 1 [Danaus plexippus]
Length = 377
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEA-LVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AKI S+A LV T G
Sbjct: 100 NFDLLISKIYPSRDEYEA-----HQER---------VLAKINMSHSQASLVNSITEGIKL 145
Query: 144 ASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRP 201
S RPQ R R+N + + +N E NG S D S+ P
Sbjct: 146 QS--QNRPQ--------RARKNHDDNSNASNSNNNTEPPQNGSSSSVPKDSTSSAANP 193
>gi|319803023|ref|NP_001188361.1| E3 ubiquitin-protein ligase RING1 [Bombyx mori]
gi|317175909|dbj|BAJ54070.1| sex combs extra [Bombyx mori]
Length = 377
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 99/194 (51%), Gaps = 29/194 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEA-LVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AK+ S+A LV T G
Sbjct: 100 NFDLLISKIYPSRDEYEA-----HQE---------LVLAKLSMSHSQASLVNSITEGIKL 145
Query: 144 ASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRR 203
S RPQR+ R+N + + + + E NG ++ D S+ P
Sbjct: 146 QS--QNRPQRS--------RKNHDESSNASNSNGNVETAQNGSNSATPKDGTSSSGNP-- 193
Query: 204 RKRRSGIRSSQPSS 217
+SG +S P+S
Sbjct: 194 --AQSGQSTSNPAS 205
>gi|340724527|ref|XP_003400633.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Bombus
terrestris]
gi|380021048|ref|XP_003694386.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 1 [Apis
florea]
Length = 380
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 11/232 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR-RTPGK 141
N+D LIS +YP D+YE +E + + + SI + + QS+ +R R
Sbjct: 101 NFDLLISKIYPSRDEYEAHQERVLAKLNKSHSQAALVNSITEGIKLQSQNRSQRSRKNAN 160
Query: 142 DTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDE---NDDNGG---KDSSSNDER 195
++ + N + A N+ +Q N+ +GG ++S++
Sbjct: 161 ESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTGPLNNSSGGTTSRNSTTPSPN 220
Query: 196 SAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWN 247
A P+ KR+ +++S+ SS+A ++ G D V E G S L+ N
Sbjct: 221 PANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLMLN 270
>gi|350425025|ref|XP_003493989.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Bombus
impatiens]
Length = 380
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 11/232 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR-RTPGK 141
N+D LIS +YP D+YE +E + + + SI + + QS+ +R R
Sbjct: 101 NFDLLISKIYPSRDEYEAHQERVLAKLNKSHSQAALVNSITEGIKLQSQNRSQRSRKNAN 160
Query: 142 DTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDE---NDDNGG---KDSSSNDER 195
++ + N + A N+ +Q N+ +GG ++S++
Sbjct: 161 ESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTGPLNNSSGGTTSRNSTTPSPN 220
Query: 196 SAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWN 247
A P+ KR+ +++S+ SS+A ++ G D V E G S L+ N
Sbjct: 221 PANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLMLN 270
>gi|380021050|ref|XP_003694387.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like isoform 2 [Apis
florea]
Length = 369
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 116/238 (48%), Gaps = 34/238 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE-ALVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AK+ + S+ ALV T G
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQER---------VLAKLNKSHSQAALVNSITEGIKL 146
Query: 144 ASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGG--------------KDS 189
S R QR+ + A+ S T + S++ N ++S
Sbjct: 147 QS--QNRSQRSRKNAN-ESENASNATSYNNSQNASAPATPNATNAANQSDSSQSTTSRNS 203
Query: 190 SSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWN 247
++ A P+ KR+ +++S+ SS+A ++ G D V E G S L+ N
Sbjct: 204 TTPSPNPANQIPKPPKRQKSLQNSENDSSSAEAETGG--GDSMVDTEGEGPSEPLMLN 259
>gi|325182454|emb|CCA16906.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 423
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ ++ CPICLG+I +T VMECLHRFC ECI K +RL ECP+CR H S+R+LR D
Sbjct: 76 DLNSNLTCPICLGLINQTMVVMECLHRFCGECIQKCLRLAIKECPSCRIHIPSKRALRRD 135
Query: 84 PNYDALISALYPDIDKYEEEELAFHEE-ERTRN 115
N+DALI+ +YP+ ++E++E E+ R+RN
Sbjct: 136 LNFDALIATIYPNRQEFEQQEAQLIEDLNRSRN 168
>gi|147899469|ref|NP_001087647.1| E3 ubiquitin-protein ligase RING2-A [Xenopus laevis]
gi|62900962|sp|Q66J69.1|RNG2A_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-A; AltName:
Full=RING finger protein 1B-A; Short=RING1b-A; AltName:
Full=RING finger protein 2-A
gi|51704098|gb|AAH81039.1| MGC81738 protein [Xenopus laevis]
Length = 344
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 123/265 (46%), Gaps = 39/265 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ + R N+Q + +SI + + Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQDRVLAKLNRLHNQQALSSSIEEGLKMQA------------ 149
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPR 202
M R QR + H S T G EDN D SN E R
Sbjct: 150 -----MHRAQRVRKHQH-----ESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPS---R 196
Query: 203 RRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNT 262
+R R S ++P S +GG D G E+ G LV+ L + G S T
Sbjct: 197 KRSRASEDSGAEPDLS---HEGGVRSPDPPGGGET-GSEIELVFRAHPLLVEKDG-YSQT 251
Query: 263 RHGSASGCNSKSSRSTRLNKLVEYL 287
R+ K++ + ++ L +YL
Sbjct: 252 RY-------VKTTANATVDHLSKYL 269
>gi|193610656|ref|XP_001946247.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
I+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 IQNELMCPICLDVLKKTMTAKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D +IS +YPD D+YE +
Sbjct: 101 NFDLIISKIYPDRDEYEAHQ 120
>gi|148222454|ref|NP_001090794.1| ring finger protein 1 [Xenopus (Silurana) tropicalis]
gi|134025969|gb|AAI35192.1| ring1 protein [Xenopus (Silurana) tropicalis]
Length = 344
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 123/265 (46%), Gaps = 39/265 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ + R N+Q + +SI + + Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQA------------ 149
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPR 202
M R QR + H S T G EDN D SN E R
Sbjct: 150 -----MHRAQRVRKHQH-----ESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAGPS---R 196
Query: 203 RRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNT 262
+R R S ++P S +GG D G E+ G LV+ L + G S T
Sbjct: 197 KRSRASEDSGAEPDLS---HEGGVRSPDPPGGGET-GSEIELVFRAHPLLVEKDG-YSQT 251
Query: 263 RHGSASGCNSKSSRSTRLNKLVEYL 287
R+ K++ + ++ L +YL
Sbjct: 252 RY-------VKTTANATVDHLSKYL 269
>gi|28422507|gb|AAH46935.1| Rnf2-b protein [Xenopus laevis]
Length = 369
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 98/213 (46%), Gaps = 42/213 (19%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 67 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 126
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ + R N+Q + +SI + + Q+
Sbjct: 127 NFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQA------------ 174
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPR 202
M R QR + H S T G EDN D SN E P
Sbjct: 175 -----MHRAQRVRKHQH-----ESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAG----PS 220
Query: 203 RRKRRS--------------GIRSSQPSSSAAN 221
R++ R+ G+RS P N
Sbjct: 221 RKRSRASEDSGAEPDLSHEGGVRSPDPPGGGEN 253
>gi|307174595|gb|EFN65017.1| E3 ubiquitin-protein ligase RING2 [Camponotus floridanus]
Length = 379
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 119/248 (47%), Gaps = 44/248 (17%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE-ALVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AK+ + S+ ALV T G
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQER---------VLAKLNKSHSQAALVNSITEGIKL 146
Query: 144 ASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSED-------NEDENDDN------------ 184
S RPQR+ + A+ S T + + + N N N
Sbjct: 147 QS--QNRPQRSRKNAN-ESENASNATSYNNTPNVSAPTTPNPSTNVANQSDSSQSATGPL 203
Query: 185 --GG---KDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRG 239
GG ++S++ A P+ KR+ ++S+ SS+A ++ G D V E G
Sbjct: 204 NSGGTTSRNSTTPSPNPANQIPKAPKRQKSFQNSENDSSSAEAETGG--GDSMVDTEGEG 261
Query: 240 ISPGLVWN 247
S L+ N
Sbjct: 262 PSEPLMLN 269
>gi|307204964|gb|EFN83503.1| E3 ubiquitin-protein ligase RING1 [Harpegnathos saltator]
Length = 399
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 97/201 (48%), Gaps = 37/201 (18%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE-ALVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AK+ + S+ ALV T G
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQER---------VLAKLNKSHSQAALVNSITEGIKL 146
Query: 144 ASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRR 203
S RPQR+ R+N+ NE EN N S +N S P
Sbjct: 147 QS--QNRPQRS--------RKNA----------NESENASNA--TSYNNTNTSGPTTPNA 184
Query: 204 RKRRSGIRSSQPSSSAANSDG 224
+ S S+ NS G
Sbjct: 185 SANAANQSDSSQSTGPLNSGG 205
>gi|195997493|ref|XP_002108615.1| hypothetical protein TRIADDRAFT_19102 [Trichoplax adhaerens]
gi|190589391|gb|EDV29413.1| hypothetical protein TRIADDRAFT_19102, partial [Trichoplax
adhaerens]
Length = 152
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V + L + ++ CPICL I+K T T ECLHRFC ECI ++R GN ECP CR SR
Sbjct: 21 VTISLRSLHSELMCPICLDILKSTMTTKECLHRFCAECITTALRSGNKECPTCRKKLVSR 80
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP+ ++YE ++
Sbjct: 81 RSLRPDPNFDALISKIYPNREEYEAQQ 107
>gi|156408748|ref|XP_001642018.1| predicted protein [Nematostella vectensis]
gi|156229159|gb|EDO49955.1| predicted protein [Nematostella vectensis]
Length = 326
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 99/183 (54%), Gaps = 6/183 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC+ECI ++R GN ECP CR S+RSLR DP
Sbjct: 44 LHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNKECPTCRKKLVSKRSLRPDP 103
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALI+ +YPD ++YE +E + N+Q + +SI + + Q+ V++R+
Sbjct: 104 NFDALIAKIYPDREEYEAHQEKVLQRLSKHHNQQALTSSIEEGLKLQAMNRAQRVRKRSS 163
Query: 140 GKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEV 199
+ +P + + T R+R+ + E SE+ D + + S + E
Sbjct: 164 EEQGHAPIAATAEGS-TTPTNRKRQKANSDESDASENTFDSTGEASNEASENVSEIELVF 222
Query: 200 RPR 202
+P
Sbjct: 223 KPH 225
>gi|90101656|sp|Q7ZWM8.2|RNG2B_XENLA RecName: Full=E3 ubiquitin-protein ligase RING2-B; AltName:
Full=RING finger protein 1B-B; Short=RING1b-B; AltName:
Full=RING finger protein 2-B
Length = 343
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 98/213 (46%), Gaps = 42/213 (19%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ + R N+Q + +SI + + Q+
Sbjct: 101 NFDALISKIYPSRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQA------------ 148
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPR 202
M R QR + H S T G EDN D SN E P
Sbjct: 149 -----MHRAQRVRKHQH-----ESDNTTFSGGEDNCDSRSHVSNPSVHSNQEAG----PS 194
Query: 203 RRKRRS--------------GIRSSQPSSSAAN 221
R++ R+ G+RS P N
Sbjct: 195 RKRSRASEDSGAEPDLSHEGGVRSPDPPGGGEN 227
>gi|332021896|gb|EGI62232.1| E3 ubiquitin-protein ligase RING2 [Acromyrmex echinatior]
Length = 379
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 17/136 (12%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE-ALVKRRTPGKDT 143
N+D LIS +YP D+YE H+E +AK+ + S+ ALV T G
Sbjct: 101 NFDLLISKIYPSRDEYEA-----HQER---------VLAKLNKSHSQAALVNSITEGIKL 146
Query: 144 ASPFMTRPQRNPRTAH 159
S RPQR+ + A+
Sbjct: 147 QS--QNRPQRSRKNAN 160
>gi|397611881|gb|EJK61509.1| hypothetical protein THAOC_17988 [Thalassiosira oceanica]
Length = 581
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ +I QCPICLG IK RTVMECLHRFC +CI+K +RLG ECP CR SRRS
Sbjct: 50 LDINDINAAFQCPICLGYIKNCRTVMECLHRFCEDCIEKYIRLGKKECPQCRKPVPSRRS 109
Query: 80 LRDDPNYDALISALYPDID---KYEEEELA 106
LR D ++DAL+ +++ D+D KY+EE++
Sbjct: 110 LRTDKSFDALMRSIHGDVDEIEKYQEEKIV 139
>gi|198427593|ref|XP_002130931.1| PREDICTED: similar to ring finger protein 2 [Ciona intestinalis]
Length = 372
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL +++ T T ECLHRFC ECI ++R GN ECP CR SRRSLR DP
Sbjct: 44 LHSELMCPICLDMLRNTMTTKECLHRFCSECITTALRSGNKECPTCRKKLVSRRSLRPDP 103
Query: 85 NYDALISALYPDIDKYE 101
N+DALI+ +YP D+YE
Sbjct: 104 NFDALIAKIYPSRDEYE 120
>gi|332372788|gb|AEE61536.1| unknown [Dendroctonus ponderosae]
Length = 382
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC ECI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSECIITALRSGNKECPTCRKKLVSKRSLRADP 100
Query: 85 NYDALISALYPDIDKYE---EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR-RTPG 140
N+D LI+ +YP D+YE E+ +A E +R +Q SI + + QS+ R R P
Sbjct: 101 NFDLLIAKIYPSRDEYEAHQEKVMAKLNEFHSREAFVQ-SINEGIKLQSQNRAPRGRKPN 159
Query: 141 KDTAS 145
+ S
Sbjct: 160 ETVTS 164
>gi|443685943|gb|ELT89389.1| hypothetical protein CAPTEDRAFT_219532 [Capitella teleta]
Length = 337
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC+ECI ++R GN ECP CR S+RSLR DP
Sbjct: 39 LHSELMCPICLDMLKNTMTTKECLHRFCQECIITALRSGNKECPTCRKKLVSKRSLRPDP 98
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP D+Y+ ++
Sbjct: 99 NFDALISKIYPSRDEYDAQQ 118
>gi|328707142|ref|XP_001949156.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAK 124
N+D LIS +YP+ D+YE + E+ N QA++ +
Sbjct: 101 NFDLLISKIYPNRDEYEAHQTRVL--EKLNNSHSQANLVQ 138
>gi|47215614|emb|CAG11645.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 47 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 106
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE +E + N+Q + SI + + Q+ +KR D
Sbjct: 107 NFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMTSIKRTKTSDD 166
Query: 143 TA 144
+
Sbjct: 167 SG 168
>gi|391326829|ref|XP_003737913.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Metaseiulus
occidentalis]
Length = 336
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 3/118 (2%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL I+K T T ECLHRFC++CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDILKTTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRADP 100
Query: 85 NYDALISALYPDIDKYEE-EELAFHEEERTRNKQIQASIAKIFQRQ--SEALVKRRTP 139
N+DALI+ +YP D+YE +E + +T + +SI + + Q S + R+ P
Sbjct: 101 NFDALIAKIYPSRDEYEHYQERVLAKLNKTCGQAFASSIEEGLKAQALSRKMTNRKRP 158
>gi|440793647|gb|ELR14825.1| E3 ubiquitin-protein ligase RING2, putative [Acanthamoeba
castellanii str. Neff]
Length = 271
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 19/179 (10%)
Query: 43 TVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKY-- 100
T+MECLHRFC ECI K +R+G ECP CR HC+SRR LR DP +DALI+++YP++D+Y
Sbjct: 2 TLMECLHRFCAECISKCLRVGKRECPTCRVHCSSRRQLRPDPEFDALIASVYPNLDEYEA 61
Query: 101 -EEEELAFHEEERTRNKQIQASIAKIFQRQ----SEALVKRRTPGKDTASPFMTRPQRNP 155
EEE +A ++ + + S+ K RQ S A ++R K +A+ F+ +P
Sbjct: 62 QEEEFIADLNKKMSCQSHLTESVQKGILRQRSATSAAATRKR---KASAATFIAKPA--- 115
Query: 156 RTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSS-----SNDERSAEVRPRRRKRRSG 209
H + H GS + D+ G + + + D S + PR RR+
Sbjct: 116 -IFHHLYFTITPSQRHHGSIEPSDQKTTRPGTEQAESLLNTEDLVSFLLLPRPDMRRTA 173
>gi|405966171|gb|EKC31483.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC++CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYE 101
N+DALIS +YP D+YE
Sbjct: 101 NFDALISKIYPSRDEYE 117
>gi|405976877|gb|EKC41356.1| E3 ubiquitin-protein ligase RING2-A [Crassostrea gigas]
Length = 332
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC++CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYE 101
N+DALIS +YP D+YE
Sbjct: 101 NFDALISKIYPSRDEYE 117
>gi|410924147|ref|XP_003975543.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Takifugu
rubripes]
Length = 342
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 104/206 (50%), Gaps = 29/206 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 104
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTA 144
N+DALIS +YP D+YE H+E ++ A I+K +AL G
Sbjct: 105 NFDALISKIYPSRDEYEA-----HQE------RVLARISK--HNNQQALSHSIEEGLKIQ 151
Query: 145 SPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRR 204
+ MTR QR +R G+ G+EDN D S+++ + E P +
Sbjct: 152 A--MTRLQRG------KRHTVENGS---GAEDNGD-----SSHCSNASVHSNQEAGPSIK 195
Query: 205 KRRSGIRSSQPSSSAANSDGGCIEND 230
+ ++ S +AA + GG ND
Sbjct: 196 RTKTSDDSGLDMDNAAENGGGDSVND 221
>gi|289741557|gb|ADD19526.1| putative E3 ubiquitin ligase [Glossina morsitans morsitans]
Length = 415
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 90/174 (51%), Gaps = 22/174 (12%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC++CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSA 197
S RP R RT + RG H S + N+ N + S N + A
Sbjct: 146 QS--QNRPLRF-RT----KGAGGRGGNHNSSHIHNVSNESNTNGNESDNRDSGA 192
>gi|170047129|ref|XP_001851087.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
gi|167869650|gb|EDS33033.1| E3 ubiquitin-protein ligase RING1 [Culex quinquefasciatus]
Length = 418
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 99
Query: 85 NYDALISALYPDIDKYE 101
N+D LIS +YP D+YE
Sbjct: 100 NFDLLISKIYPSRDEYE 116
>gi|157167823|ref|XP_001655936.1| ring finger protein [Aedes aegypti]
gi|108871414|gb|EAT35639.1| AAEL012209-PA [Aedes aegypti]
Length = 395
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 99
Query: 85 NYDALISALYPDIDKYE 101
N+D LIS +YP D+YE
Sbjct: 100 NFDLLISKIYPSRDEYE 116
>gi|355746097|gb|EHH50722.1| hypothetical protein EGM_01592 [Macaca fascicularis]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP D+YE +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ 124
>gi|2239142|emb|CAA73380.1| polycomb-M33 interacting protein Ring1B [Mus musculus]
Length = 339
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP D+YE +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ 124
>gi|163914471|ref|NP_001106320.1| ring finger protein 2 [Xenopus laevis]
gi|160773127|gb|AAI55052.1| LOC100127274 protein [Xenopus laevis]
gi|213625992|gb|AAI69620.1| Hypothetical protein LOC100127274 [Xenopus laevis]
gi|213626554|gb|AAI69622.1| Hypothetical protein LOC100127274 [Xenopus laevis]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|224056986|ref|XP_002190866.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Taeniopygia guttata]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|348543967|ref|XP_003459453.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oreochromis
niloticus]
Length = 342
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 103/210 (49%), Gaps = 28/210 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 104
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTA 144
N+DALIS +YP D+YE H+E ++ A I+K +AL G
Sbjct: 105 NFDALISKIYPSRDEYEA-----HQE------RVLARISK--HNNQQALSHSIEEGLKIQ 151
Query: 145 SPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRR 204
+ MTR QR +R G+ G+EDN D + + SN E ++ +
Sbjct: 152 A--MTRLQRG------KRHTVENGS---GAEDNGDSSHCSNAS-VHSNQEAGPSIKRTKT 199
Query: 205 KRRSGIRSSQPSSSAANS---DGGCIENDL 231
SG+ + + DGG E +L
Sbjct: 200 SDDSGLDMDNAAENGGGDSVIDGGASEIEL 229
>gi|444729309|gb|ELW69733.1| E3 ubiquitin-protein ligase RING2 [Tupaia chinensis]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|387019653|gb|AFJ51944.1| e3 ubiquitin-protein ligase RING2-like [Crotalus adamanteus]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|417399162|gb|JAA46609.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|148707518|gb|EDL39465.1| ring finger protein 2, isoform CRA_a [Mus musculus]
Length = 337
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 39 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 98
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 99 RSLRPDPNFDALISKIYPSRDEYE 122
>gi|6005747|ref|NP_009143.1| E3 ubiquitin-protein ligase RING2 [Homo sapiens]
gi|332230654|ref|XP_003264507.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Nomascus
leucogenys]
gi|332811387|ref|XP_514057.3| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
troglodytes]
gi|397489263|ref|XP_003815650.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
paniscus]
gi|402857835|ref|XP_003893444.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Papio
anubis]
gi|426333040|ref|XP_004028095.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Gorilla
gorilla gorilla]
gi|62901044|sp|Q99496.1|RING2_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING2; AltName:
Full=Huntingtin-interacting protein 2-interacting
protein 3; Short=HIP2-interacting protein 3; AltName:
Full=Protein DinG; AltName: Full=RING finger protein 1B;
Short=RING1b; AltName: Full=RING finger protein 2;
AltName: Full=RING finger protein BAP-1
gi|4769008|gb|AAD29717.1|AF141327_1 ring finger protein BAP-1 [Homo sapiens]
gi|1785643|emb|CAA71596.1| dinG [Homo sapiens]
gi|15214887|gb|AAH12583.1| Ring finger protein 2 [Homo sapiens]
gi|119611594|gb|EAW91188.1| ring finger protein 2, isoform CRA_b [Homo sapiens]
gi|123988874|gb|ABM83858.1| ring finger protein 2 [synthetic construct]
gi|123999200|gb|ABM87180.1| ring finger protein 2 [synthetic construct]
gi|189054551|dbj|BAG37324.1| unnamed protein product [Homo sapiens]
gi|208967348|dbj|BAG73688.1| ring finger protein 2 [synthetic construct]
gi|380815346|gb|AFE79547.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|383412967|gb|AFH29697.1| E3 ubiquitin-protein ligase RING2 [Macaca mulatta]
gi|410221702|gb|JAA08070.1| ring finger protein 2 [Pan troglodytes]
gi|410263314|gb|JAA19623.1| ring finger protein 2 [Pan troglodytes]
gi|410305956|gb|JAA31578.1| ring finger protein 2 [Pan troglodytes]
gi|410331985|gb|JAA34939.1| ring finger protein 2 [Pan troglodytes]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|301770957|ref|XP_002920895.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Ailuropoda
melanoleuca]
Length = 356
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP D+YE +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ 124
>gi|449277702|gb|EMC85785.1| E3 ubiquitin-protein ligase RING2 [Columba livia]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|326924674|ref|XP_003208550.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Meleagris
gallopavo]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|281353876|gb|EFB29460.1| hypothetical protein PANDA_009706 [Ailuropoda melanoleuca]
Length = 333
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|155372127|ref|NP_001094673.1| E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|57088937|ref|XP_537164.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Canis lupus
familiaris]
gi|194210405|ref|XP_001490057.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Equus caballus]
gi|354477357|ref|XP_003500887.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|410986000|ref|XP_004001389.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING2
[Felis catus]
gi|426240030|ref|XP_004013918.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Ovis aries]
gi|151554874|gb|AAI48045.1| RNF2 protein [Bos taurus]
gi|296478860|tpg|DAA20975.1| TPA: E3 ubiquitin-protein ligase RING2 [Bos taurus]
gi|344238862|gb|EGV94965.1| E3 ubiquitin-protein ligase RING2 [Cricetulus griseus]
gi|351705546|gb|EHB08465.1| E3 ubiquitin-protein ligase RING2 [Heterocephalus glaber]
gi|440908241|gb|ELR58285.1| E3 ubiquitin-protein ligase RING2 [Bos grunniens mutus]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|126306334|ref|XP_001366901.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Monodelphis
domestica]
gi|149636359|ref|XP_001516692.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Ornithorhynchus
anatinus]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|47497988|ref|NP_998872.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|171847227|gb|AAI61443.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624130|gb|AAI70688.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
gi|213624607|gb|AAI71333.1| ring finger protein 2 [Xenopus (Silurana) tropicalis]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|335295881|ref|XP_003357628.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 2 [Sus
scrofa]
Length = 347
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 49 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 108
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 109 RSLRPDPNFDALISKIYPSRDEYE 132
>gi|118094209|ref|XP_422295.2| PREDICTED: E3 ubiquitin-protein ligase RING2 [Gallus gallus]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|197097984|ref|NP_001127433.1| E3 ubiquitin-protein ligase RING2 [Pongo abelii]
gi|62900923|sp|Q5R9J5.1|RING2_PONAB RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|55729672|emb|CAH91565.1| hypothetical protein [Pongo abelii]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|33563274|ref|NP_035407.1| E3 ubiquitin-protein ligase RING2 [Mus musculus]
gi|296229541|ref|XP_002760304.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Callithrix
jacchus]
gi|403266315|ref|XP_003925335.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Saimiri
boliviensis boliviensis]
gi|62901047|sp|Q9CQJ4.1|RING2_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|12849049|dbj|BAB28186.1| unnamed protein product [Mus musculus]
gi|12850291|dbj|BAB28663.1| unnamed protein product [Mus musculus]
gi|18043367|gb|AAH20122.1| Ring finger protein 2 [Mus musculus]
gi|26326309|dbj|BAC26898.1| unnamed protein product [Mus musculus]
gi|71059923|emb|CAJ18505.1| Rnf2 [Mus musculus]
gi|74217079|dbj|BAE26638.1| unnamed protein product [Mus musculus]
gi|148707519|gb|EDL39466.1| ring finger protein 2, isoform CRA_b [Mus musculus]
gi|149058413|gb|EDM09570.1| ring finger protein 2 [Rattus norvegicus]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|395530972|ref|XP_003767558.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Sarcophilus harrisii]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|327277423|ref|XP_003223464.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Anolis
carolinensis]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|291412444|ref|XP_002722489.1| PREDICTED: ring finger protein 2 [Oryctolagus cuniculus]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|431915925|gb|ELK16179.1| E3 ubiquitin-protein ligase RING2 [Pteropus alecto]
Length = 336
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|355716862|gb|AES05749.1| ring finger protein 2 [Mustela putorius furo]
Length = 334
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 37 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 96
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 97 RSLRPDPNFDALISKIYPSRDEYE 120
>gi|148362153|gb|ABQ59676.1| RING1 [Salmo salar]
Length = 395
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 105/234 (44%), Gaps = 33/234 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR SRRSLR D
Sbjct: 49 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDS 108
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ R NKQ + +SI + + Q+
Sbjct: 109 NFDALISKIYPSRDEYEAHQDRVLERLNRLHNKQALSSSIEEGLRMQA------------ 156
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSN-----DERSA 197
+ R QR + A + S T G EDN D + S+ +
Sbjct: 157 -----LHRAQRVRKPA-----QESDNTTFSGGEDNGDARSHLSHDSAPSHAPLPPSHTPS 206
Query: 198 EVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEML 251
E P R +R + S DGG L +E G LV+ P L
Sbjct: 207 EAGPSRNPKRPRVS----DESGPEVDGGSPTAPLRHHKEGPGSEIELVFRPHPL 256
>gi|71043690|ref|NP_001020838.1| E3 ubiquitin-protein ligase RING2 [Rattus norvegicus]
gi|90101447|sp|Q4KLY4.1|RING2_RAT RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|68533722|gb|AAH98941.1| Ring finger protein 2 [Rattus norvegicus]
Length = 308
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP D+YE +
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYEAHQ 124
>gi|26354897|dbj|BAC41075.1| unnamed protein product [Mus musculus]
Length = 336
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|260182163|gb|ACX35592.1| RING1 [Salmo salar]
Length = 388
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 105/234 (44%), Gaps = 33/234 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR SRRSLR D
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDS 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ R NKQ + +SI + + Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQDRVLERLNRLHNKQALSSSIEEGLRMQA------------ 149
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSN-----DERSA 197
+ R QR + A + S T G EDN D + S+ +
Sbjct: 150 -----LHRAQRVRKPA-----QESDNTTFSGGEDNGDARSHLSHDSAPSHAPLPPSHTPS 199
Query: 198 EVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEML 251
E P R +R + S DGG L +E G LV+ P L
Sbjct: 200 EAGPSRNPKRPRVS----DESGPEVDGGSPTAPLRHHKEGPGSEIELVFRPHPL 249
>gi|260789153|ref|XP_002589612.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
gi|229274792|gb|EEN45623.1| hypothetical protein BRAFLDRAFT_122927 [Branchiostoma floridae]
Length = 350
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC++CI ++R GN ECP CR S+RSLR DP
Sbjct: 47 LHSELMCPICLDMLKNTMTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDP 106
Query: 85 NYDALISALYPDIDKYE 101
N+DALIS +YP D+YE
Sbjct: 107 NFDALISKIYPSRDEYE 123
>gi|311264978|ref|XP_003130427.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like isoform 1 [Sus
scrofa]
Length = 336
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|327290713|ref|XP_003230066.1| PREDICTED: e3 ubiquitin-protein ligase RING2-A-like [Anolis
carolinensis]
Length = 331
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKHTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP D+YE +
Sbjct: 102 NFDALISKIYPSRDEYEAHQ 121
>gi|390348740|ref|XP_792718.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 269
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC++CI ++R GN ECP CR S+RSLR DP
Sbjct: 44 LHSELMCPICLDMLKNTYTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDP 103
Query: 85 NYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTP 139
N+DALIS +YP D+YE +E + +R + SI + + Q+ +R P
Sbjct: 104 NFDALISKIYPSRDEYEAHQERVMAKLNKRHNTAALSTSIEEGLKVQALNRAQRVPP 160
>gi|34996481|ref|NP_571288.1| E3 ubiquitin-protein ligase RING2 [Danio rerio]
gi|62901019|sp|Q803I4.1|RING2_DANRE RecName: Full=E3 ubiquitin-protein ligase RING2; AltName: Full=RING
finger protein 1B; Short=RING1b; AltName: Full=RING
finger protein 2
gi|27881923|gb|AAH44472.1| Ring finger protein 2 [Danio rerio]
gi|182890358|gb|AAI64137.1| Rnf2 protein [Danio rerio]
Length = 336
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 104
Query: 85 NYDALISALYPDIDKYE 101
N+DALIS +YP D+YE
Sbjct: 105 NFDALISKIYPSRDEYE 121
>gi|229366298|gb|ACQ58129.1| E3 ubiquitin-protein ligase RING2 [Anoplopoma fimbria]
Length = 344
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 102/201 (50%), Gaps = 29/201 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 47 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 106
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTA 144
N+DALIS +YP D+YE H+E ++ A I+K +AL G
Sbjct: 107 NFDALISKIYPSRDEYEA-----HQE------RVLARISK--HNNQQALSHSIEEGLKIQ 153
Query: 145 SPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRR 204
+ MTR QR +R G+ G+EDN D S+++ + E P +
Sbjct: 154 A--MTRLQRG------KRHTVENGS---GAEDNGD-----SAHCSNASVHSNQEAGPSIK 197
Query: 205 KRRSGIRSSQPSSSAANSDGG 225
+ ++ S +AA + GG
Sbjct: 198 RTKTSDDSGLDMDNAAENGGG 218
>gi|312376122|gb|EFR23307.1| hypothetical protein AND_13125 [Anopheles darlingi]
Length = 449
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 99
Query: 85 NYDALISALYPDIDKYE 101
N+D LIS +YP D+YE
Sbjct: 100 NFDLLISKIYPSRDEYE 116
>gi|296474544|tpg|DAA16659.1| TPA: ring finger protein 1 [Bos taurus]
Length = 382
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|193700165|ref|XP_001946738.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 338
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D LIS +YP D+YE +
Sbjct: 101 NFDLLISKIYPSRDEYEAHQ 120
>gi|432089360|gb|ELK23311.1| E3 ubiquitin-protein ligase RING2 [Myotis davidii]
Length = 397
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 99 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 158
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP D+YE +
Sbjct: 159 RSLRPDPNFDALISKIYPSRDEYEAHQ 185
>gi|226958428|ref|NP_033092.3| E3 ubiquitin-protein ligase RING1 [Mus musculus]
gi|92090635|sp|O35730.2|RING1_MOUSE RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Transcription repressor
Ring1A
gi|74192043|dbj|BAE32956.1| unnamed protein product [Mus musculus]
Length = 406
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|432911762|ref|XP_004078710.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Oryzias latipes]
Length = 342
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 104
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP D+YE +
Sbjct: 105 NFDALISKIYPSRDEYEAHQ 124
>gi|440909609|gb|ELR59498.1| hypothetical protein M91_02566, partial [Bos grunniens mutus]
Length = 379
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 66 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 125
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 126 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 185
Query: 140 GKD 142
G D
Sbjct: 186 GSD 188
>gi|355558944|gb|EHH15724.1| hypothetical protein EGK_01854 [Macaca mulatta]
Length = 246
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 97
Query: 78 RSLRDDPNYDALISALYPDIDKYE 101
RSLR DPN+DALIS +YP D+YE
Sbjct: 98 RSLRPDPNFDALISKIYPSRDEYE 121
>gi|74207028|dbj|BAE33300.1| unnamed protein product [Mus musculus]
Length = 406
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|354487574|ref|XP_003505947.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cricetulus
griseus]
gi|344252993|gb|EGW09097.1| E3 ubiquitin-protein ligase RING1 [Cricetulus griseus]
Length = 408
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|351703542|gb|EHB06461.1| E3 ubiquitin-protein ligase RING1 [Heterocephalus glaber]
Length = 376
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|242019424|ref|XP_002430161.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
gi|212515252|gb|EEB17423.1| ubiquitin ligase protein RING2-A, putative [Pediculus humanus
corporis]
Length = 352
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 43 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 102
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D LIS +YP D+YE +
Sbjct: 103 NFDLLISKIYPSRDEYEAHQ 122
>gi|118793629|ref|XP_320974.3| AGAP002073-PA [Anopheles gambiae str. PEST]
gi|116115902|gb|EAA01047.3| AGAP002073-PA [Anopheles gambiae str. PEST]
Length = 423
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 99
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D LIS +YP D+YE +
Sbjct: 100 NFDLLISKIYPSRDEYEAHQ 119
>gi|348578003|ref|XP_003474773.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Cavia porcellus]
Length = 291
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 104
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP D+YE +
Sbjct: 105 NFDALISKIYPSRDEYEAHQ 124
>gi|426250134|ref|XP_004018793.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Ovis aries]
Length = 392
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|395832135|ref|XP_003789131.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Otolemur garnettii]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|157280011|ref|NP_001098521.1| E3 ubiquitin-protein ligase RING1 [Bos taurus]
gi|154426104|gb|AAI51292.1| RING1 protein [Bos taurus]
Length = 407
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|51479192|ref|NP_002922.2| E3 ubiquitin-protein ligase RING1 [Homo sapiens]
gi|90110053|sp|Q06587.2|RING1_HUMAN RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=Really interesting new
gene 1 protein
gi|30354168|gb|AAH51866.1| Ring finger protein 1 [Homo sapiens]
gi|33877354|gb|AAH02922.2| Ring finger protein 1 [Homo sapiens]
gi|66347232|emb|CAI95620.1| ring finger protein 1 [Homo sapiens]
gi|158259733|dbj|BAF82044.1| unnamed protein product [Homo sapiens]
gi|208967344|dbj|BAG73686.1| ring finger protein 1 [synthetic construct]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|397474342|ref|XP_003808641.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1
[Pan paniscus]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|355561586|gb|EHH18218.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|332245586|ref|XP_003271939.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Nomascus
leucogenys]
gi|402866635|ref|XP_003897484.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Papio anubis]
gi|426352705|ref|XP_004043850.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Gorilla gorilla
gorilla]
gi|387542564|gb|AFJ71909.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|410207298|gb|JAA00868.1| ring finger protein 1 [Pan troglodytes]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|260182172|gb|ACX35600.1| RING1 [Salmo salar]
Length = 387
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR SRRSLR D
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDS 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ R NKQ + +SI + + Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQDRVLERLNRLHNKQALSSSIEEGLRMQA------------ 149
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPR 202
+ R QR + A + S T G EDN D + S+ P
Sbjct: 150 -----LHRAQRVRKPA-----QESDNTTFSGGEDNGDTRSHLSHDSAPSHAPLPPSHTPS 199
Query: 203 RRKR-RSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEML 251
R+ R + S DGG + +ES G LV+ P L
Sbjct: 200 EAGHTRNPKRPRESDGSVPEVDGGSPTPPVRRHKESPGSEIELVFRPHPL 249
>gi|291190270|ref|NP_001167351.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
gi|223649380|gb|ACN11448.1| E3 ubiquitin-protein ligase RING2-A [Salmo salar]
Length = 388
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 104/230 (45%), Gaps = 25/230 (10%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR SRRSLR D
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDS 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE ++ R NKQ + +SI + + Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQDRVLERLNRLHNKQALSSSIEEGLRMQA------------ 149
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPR 202
+ R QR + A + S T G EDN D + S+ P
Sbjct: 150 -----LHRAQRVRKPA-----QESDNTTFSGGEDNGDTRSHLSHDSAPSHAPLPPSHTPS 199
Query: 203 RRKR-RSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEML 251
R+ R + S DGG + +ES G LV+ P L
Sbjct: 200 EAGHTRNPKRPRESDGSVPEVDGGSPTPPVRRHKESPGSEIELVFRPHPL 249
>gi|390335932|ref|XP_788976.3| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like
[Strongylocentrotus purpuratus]
Length = 303
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC++CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKNTYTTKECLHRFCQDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTP 139
N+DALIS +YP D+YE +E + +R + SI + + Q+ +R P
Sbjct: 101 NFDALISKIYPSRDEYEAHQERVMAKLNKRHNTAALSTSIEEGLKVQALNRAQRVPP 157
>gi|380793389|gb|AFE68570.1| E3 ubiquitin-protein ligase RING1, partial [Macaca mulatta]
Length = 213
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|348576400|ref|XP_003473975.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cavia porcellus]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|296197865|ref|XP_002746470.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Callithrix
jacchus]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|297661281|ref|XP_002809193.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Pongo
abelii]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|91095245|ref|XP_970564.1| PREDICTED: similar to ring finger protein 1 [Tribolium castaneum]
gi|270017230|gb|EFA13676.1| hypothetical protein TcasGA2_TC001392 [Tribolium castaneum]
Length = 369
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D LIS +YP D+YE +
Sbjct: 101 NFDLLISKIYPSRDEYEAHQ 120
>gi|340375342|ref|XP_003386195.1| PREDICTED: gamma-aminobutyric acid type B receptor subunit 1-like
[Amphimedon queenslandica]
Length = 935
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K +T ECLHRFC+ECI ++R GN ECP CR AS+RSLR DP
Sbjct: 42 LHSELMCPICLDLMKNAQTTKECLHRFCQECIITALRSGNKECPTCRKKLASKRSLRSDP 101
Query: 85 NYDALISALYPDIDKYEEEE----LAFHEEER---TRNKQIQASIAKIFQRQSEALVKRR 137
N+DALI+ +YP+ D+ +++ L FH+ + TR +++ + S A + R
Sbjct: 102 NFDALIAKIYPNRDELLQQQDKPRLTFHQSLQYLSTRKVRLEFQLRPHPSDDSVASLDIR 161
Query: 138 ----TPGKDTASPFMT 149
+PG PF++
Sbjct: 162 NLATSPGATATGPFLS 177
>gi|193643594|ref|XP_001942602.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Acyrthosiphon
pisum]
Length = 335
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D LIS +YP D+YE +
Sbjct: 101 NFDLLISKIYPSRDEYEAHQ 120
>gi|402766203|ref|NP_997714.2| E3 ubiquitin-protein ligase RING1 [Rattus norvegicus]
gi|90110054|sp|Q6MGB6.2|RING1_RAT RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|149043381|gb|EDL96832.1| ring finger protein 1 [Rattus norvegicus]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|417400362|gb|JAA47134.1| Putative e3 ubiquitin ligase [Desmodus rotundus]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|410958904|ref|XP_003986053.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Felis catus]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|321459285|gb|EFX70340.1| hypothetical protein DAPPUDRAFT_202413 [Daphnia pulex]
Length = 347
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 41 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDP 100
Query: 85 NYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQSE---ALVKRRTP 139
N+D LI+ +YP D+YE +E + + + + SI + + QS+ +++ P
Sbjct: 101 NFDMLIAKIYPSRDEYEAHQERVLANLSKSHSQSALLNSIEEGMKIQSQNRATRIRKNAP 160
Query: 140 GKDTASPFMTRP 151
+TA+ T P
Sbjct: 161 ENETANSITTTP 172
>gi|255078100|ref|XP_002502630.1| predicted protein [Micromonas sp. RCC299]
gi|226517895|gb|ACO63888.1| predicted protein [Micromonas sp. RCC299]
Length = 364
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V+L +R D +C IC G +KK + V CLHRFC+ CI++ +R N+ CP CR H SRR+
Sbjct: 3 VKLGSVRADTRCAICWGTLKKVKVVSPCLHRFCQGCIEEHLRKLNHHCPTCRLHVPSRRA 62
Query: 80 LRDDPNYDALISALYPDIDKYEEEELAF 107
LRDDP +DA++ ALY ++ Y+ +E A+
Sbjct: 63 LRDDPGFDAIVHALYANVPDYDLQENAY 90
>gi|403261548|ref|XP_003923180.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Saimiri boliviensis
boliviensis]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|344298828|ref|XP_003421093.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Loxodonta
africana]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|46403229|gb|AAS92634.1| ring finger protein 2 [Danio rerio]
Length = 338
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 55/77 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 47 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 106
Query: 85 NYDALISALYPDIDKYE 101
N+DALIS +YP D+YE
Sbjct: 107 NFDALISKIYPSRDEYE 123
>gi|301757099|ref|XP_002914380.1| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Ailuropoda
melanoleuca]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|194223403|ref|XP_001493432.2| PREDICTED: e3 ubiquitin-protein ligase RING1-like [Equus caballus]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|298160989|ref|NP_001177164.1| E3 ubiquitin-protein ligase RING1 [Sus scrofa]
gi|147223291|emb|CAN13293.1| ring finger protein 1 [Sus scrofa]
Length = 406
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|281338470|gb|EFB14054.1| hypothetical protein PANDA_002277 [Ailuropoda melanoleuca]
Length = 404
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|432094621|gb|ELK26127.1| E3 ubiquitin-protein ligase RING1 [Myotis davidii]
Length = 406
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|431916878|gb|ELK16638.1| E3 ubiquitin-protein ligase RING1 [Pteropus alecto]
Length = 406
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|2239144|emb|CAA73381.1| transcription repressor Ring1A [Mus musculus]
gi|3811385|gb|AAC69901.1| RING1 [Mus musculus]
gi|148678290|gb|EDL10237.1| mCG23002 [Mus musculus]
Length = 377
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|326437022|gb|EGD82592.1| hypothetical protein PTSG_11982 [Salpingoeca sp. ATCC 50818]
Length = 267
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
R V V + ++V+CPICLG+I+ T T M CLHRFC ECI K +RLG ECP CR A
Sbjct: 28 RSVSVPIHIFNEEVRCPICLGLIENTYTAMSCLHRFCAECIQKCLRLGKKECPTCRAPLA 87
Query: 76 SRRSLRDDPNYDALISALYPDIDKYEEEELAF 107
SRR LR D +D +IS +YP D Y+E++ A
Sbjct: 88 SRRRLRRDDMFDQIISTVYPSRDIYDEQQSAL 119
>gi|344278451|ref|XP_003411007.1| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Loxodonta
africana]
Length = 384
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 86 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 145
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP D+YE +
Sbjct: 146 RSLRPDPNFDALISKIYPSRDEYEAHQ 172
>gi|114326401|ref|NP_001041593.1| E3 ubiquitin-protein ligase RING1 [Canis lupus familiaris]
gi|90110052|sp|Q5TJF3.2|RING1_CANFA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1; AltName: Full=RING1a
gi|55956947|emb|CAI11434.1| ring finger protein 1 [Canis lupus familiaris]
Length = 406
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|46237549|emb|CAE83930.1| ring finger protein 1 [Rattus norvegicus]
gi|133777213|gb|AAH98635.2| Ring finger protein 1 [Rattus norvegicus]
gi|336454745|dbj|BAK40272.1| ring finger protein 1 [Rattus norvegicus]
Length = 377
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|358338769|dbj|GAA31345.2| E3 ubiquitin-protein ligase RNF1/2 [Clonorchis sinensis]
Length = 388
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 57/80 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
++ ++ CPICL I+K T T ECLHRFC ECI ++R GN ECP CR S+RSLR DP
Sbjct: 37 LKSELMCPICLDILKGTMTTKECLHRFCAECIVTALRSGNKECPTCRKKLVSKRSLRRDP 96
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALI+ +YP ++YE +
Sbjct: 97 NFDALIAKIYPSREEYEAHQ 116
>gi|256080096|ref|XP_002576319.1| polycomb-m33 interacting protein ring1b [Schistosoma mansoni]
gi|350646016|emb|CCD59293.1| polycomb-m33 interacting protein ring1b,putative [Schistosoma
mansoni]
Length = 460
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
++ ++ CPICL I+K T T ECLHRFC ECI ++R GN ECP CR S+RSLR DP
Sbjct: 38 LKSELMCPICLDILKVTMTTKECLHRFCSECIITALRNGNKECPTCRKKLVSKRSLRRDP 97
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP +YE +
Sbjct: 98 NFDALISKIYPSRQEYEAHQ 117
>gi|125490343|ref|NP_001074951.1| E3 ubiquitin-protein ligase RING1 [Pan troglodytes]
gi|169234988|ref|NP_001108431.1| E3 ubiquitin-protein ligase RING1 [Macaca mulatta]
gi|73914062|sp|Q8WMN5.1|RING1_MACMU RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325684|sp|A1YFY1.1|RING1_PANPA RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|146325685|sp|A2T6X5.1|RING1_PANTR RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|17826764|emb|CAD18905.1| ring finger protein 1 [Macaca mulatta]
gi|121483824|gb|ABM54206.1| RING1 [Pan paniscus]
gi|124111107|gb|ABM91930.1| RING1 [Pan troglodytes]
Length = 377
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|146325683|sp|A1YER5.1|RING1_GORGO RecName: Full=E3 ubiquitin-protein ligase RING1; AltName:
Full=Polycomb complex protein RING1; AltName: Full=RING
finger protein 1
gi|120974081|gb|ABM46633.1| RING1 [Gorilla gorilla]
Length = 377
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|296064|emb|CAA78389.1| RING1 [Homo sapiens]
gi|3820982|emb|CAA20235.1| ring finger protein 1 [Homo sapiens]
gi|30583543|gb|AAP36016.1| ring finger protein 1 [Homo sapiens]
gi|60655933|gb|AAX32530.1| ring finger protein 1 [synthetic construct]
gi|60655935|gb|AAX32531.1| ring finger protein 1 [synthetic construct]
gi|119624088|gb|EAX03683.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|119624089|gb|EAX03684.1| ring finger protein 1, isoform CRA_a [Homo sapiens]
gi|123989503|gb|ABM83883.1| ring finger protein 1 [synthetic construct]
gi|123999249|gb|ABM87203.1| ring finger protein 1 [synthetic construct]
Length = 377
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|444729120|gb|ELW69548.1| E3 ubiquitin-protein ligase RING1 [Tupaia chinensis]
Length = 403
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|432881043|ref|XP_004073777.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oryzias
latipes]
Length = 388
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR SR
Sbjct: 35 VAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSR 94
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEELAFHEE-ERTRNKQ-IQASIAKIFQRQS 130
RSLR D N+DALIS +YP D+YE + + E R NK+ + +SI + ++Q+
Sbjct: 95 RSLRRDSNFDALISKIYPSRDEYEAHQRSVLERLNRLHNKEALSSSIEEGLRQQA 149
>gi|6572993|gb|AAF17506.1|AF196346_1 Ring finger protein 1b [Danio rerio]
Length = 259
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 45 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 104
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP D+YE +
Sbjct: 105 NFDALISKIYPSRDEYEAHQ 124
>gi|355716581|gb|AES05657.1| ring finger protein 1 [Mustela putorius furo]
Length = 348
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 17 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 76
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 77 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 136
Query: 140 GKD 142
G D
Sbjct: 137 GSD 139
>gi|55956948|emb|CAI11435.1| ring finger protein 1 [Canis lupus familiaris]
Length = 377
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|194375029|dbj|BAG62627.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 102 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 161
Query: 140 GKD 142
G D
Sbjct: 162 GSD 164
>gi|226469290|emb|CAX70124.1| ring finger protein 2 [Schistosoma japonicum]
gi|226486844|emb|CAX74499.1| ring finger protein 2 [Schistosoma japonicum]
Length = 472
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
++ ++ CPICL I+K T T ECLHRFC ECI ++R GN ECP CR S+RSLR DP
Sbjct: 39 LKSELMCPICLDILKVTMTTKECLHRFCSECIITALRSGNKECPTCRKKLVSKRSLRRDP 98
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALI+ +YP +YE +
Sbjct: 99 NFDALIAKIYPSRQEYEAHQ 118
>gi|198450246|ref|XP_001357898.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
gi|198130953|gb|EAL27034.2| GA18995 [Drosophila pseudoobscura pseudoobscura]
Length = 439
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQR 153
S RPQR
Sbjct: 146 QS--QNRPQR 153
>gi|195158327|ref|XP_002020043.1| GL13768 [Drosophila persimilis]
gi|194116812|gb|EDW38855.1| GL13768 [Drosophila persimilis]
Length = 439
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQR 153
S RPQR
Sbjct: 146 QS--QNRPQR 153
>gi|195444500|ref|XP_002069895.1| GK11322 [Drosophila willistoni]
gi|194165980|gb|EDW80881.1| GK11322 [Drosophila willistoni]
Length = 421
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
N+D LIS +YP ++YE A E+ + Q Q+ A +
Sbjct: 100 NFDLLISKIYPSREEYE----ALQEKVMAKFNQTQSQQALV 136
>gi|194745676|ref|XP_001955313.1| GF18697 [Drosophila ananassae]
gi|190628350|gb|EDV43874.1| GF18697 [Drosophila ananassae]
Length = 432
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
N+D LIS +YP ++YE A E+ + Q Q+ A +
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQALV 136
>gi|401409546|ref|XP_003884221.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
gi|325118639|emb|CBZ54190.1| hypothetical protein NCLIV_046220 [Neospora caninum Liverpool]
Length = 1330
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 57/80 (71%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
E+R D+ CPIC+GI + V +CLHRFC +CI+K +R G ECP CR H ASRR+LR D
Sbjct: 704 ELRCDLSCPICMGIFQNVVVVKDCLHRFCADCIEKCVRTGLRECPQCRIHVASRRALRPD 763
Query: 84 PNYDALISALYPDIDKYEEE 103
P ++ +++ L+PD+ +E +
Sbjct: 764 PTFERILNKLFPDVRAFEAK 783
>gi|195054989|ref|XP_001994405.1| GH17005 [Drosophila grimshawi]
gi|193892168|gb|EDV91034.1| GH17005 [Drosophila grimshawi]
Length = 437
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----ALQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQR 153
S RPQR
Sbjct: 146 QS--QNRPQR 153
>gi|109157342|pdb|2CKL|B Chain B, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 165
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 58/87 (66%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+
Sbjct: 44 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSK 103
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RSLR DPN+DALIS +YP D+YE +
Sbjct: 104 RSLRPDPNFDALISKIYPSRDEYEAHQ 130
>gi|307147576|gb|ADN37676.1| RING1.B [Oncorhynchus mykiss]
Length = 381
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 107/236 (45%), Gaps = 37/236 (15%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR SRRSLR D
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDS 101
Query: 85 NYDALISALYPDIDKYEEEELAFHE--EERTRNKQIQASIAKIFQRQSEALVKRRTPGKD 142
N+DALIS +YP D+YE + E ++ N+ + +SI + + Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQDRALERLNQQHNNRILSSSIEEGLRMQA------------ 149
Query: 143 TASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEV--- 199
+ R QR + A + S T G EDN D + S+D A V
Sbjct: 150 -----LHRAQRVRKPA-----QESDNTTFSGGEDNGD------TRSHLSHDSAPAHVLLP 193
Query: 200 ----RPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEML 251
P R+ R + S DGG + +ES G LV+ P L
Sbjct: 194 PSHPPPEAGHTRNPKRPRESDGSVPEVDGGSPAPPVRRHKESPGSEIELVFRPHPL 249
>gi|76157474|gb|AAX28386.2| SJCHGC04391 protein [Schistosoma japonicum]
Length = 169
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
++ ++ CPICL I+K T T ECLHRFC ECI ++R GN ECP CR S+RSLR DP
Sbjct: 39 LKSELMCPICLDILKVTMTTKECLHRFCSECIITALRSGNKECPTCRKKLVSKRSLRRDP 98
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALI+ +YP +YE +
Sbjct: 99 NFDALIAKIYPSRQEYEAHQ 118
>gi|195574396|ref|XP_002105175.1| GD18065 [Drosophila simulans]
gi|194201102|gb|EDX14678.1| GD18065 [Drosophila simulans]
Length = 436
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQR 153
S RPQR
Sbjct: 146 QS--QNRPQR 153
>gi|195352923|ref|XP_002042960.1| GM16329 [Drosophila sechellia]
gi|194127025|gb|EDW49068.1| GM16329 [Drosophila sechellia]
Length = 434
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQR 153
S RPQR
Sbjct: 146 QS--QNRPQR 153
>gi|195503706|ref|XP_002098764.1| GE10548 [Drosophila yakuba]
gi|194184865|gb|EDW98476.1| GE10548 [Drosophila yakuba]
Length = 439
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQR 153
S RPQR
Sbjct: 146 QS--QNRPQR 153
>gi|194907249|ref|XP_001981516.1| GG12099 [Drosophila erecta]
gi|190656154|gb|EDV53386.1| GG12099 [Drosophila erecta]
Length = 435
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
N+D LIS +YP ++YE A E+ + Q Q+ A +
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQALV 136
>gi|17137804|ref|NP_477509.1| Sex combs extra [Drosophila melanogaster]
gi|50401702|sp|Q9VB08.1|RING1_DROME RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=Sex
comb extra protein; AltName: Full=dRING protein;
AltName: Full=dRING1
gi|7301619|gb|AAF56737.1| Sex combs extra [Drosophila melanogaster]
gi|16197987|gb|AAL13764.1| LD23953p [Drosophila melanogaster]
gi|220944852|gb|ACL84969.1| Sce-PA [synthetic construct]
gi|220952512|gb|ACL88799.1| Sce-PA [synthetic construct]
Length = 435
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRTPGKDT 143
N+D LIS +YP ++YE A E+ +AK Q QS +ALV G
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEK----------VMAKFNQTQSQQALVNSINEGIKL 145
Query: 144 ASPFMTRPQR 153
S RPQR
Sbjct: 146 QS--QNRPQR 153
>gi|338172907|gb|AEI83222.1| ring finger protein [Dimocarpus longan]
Length = 103
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/88 (82%), Positives = 76/88 (86%), Gaps = 2/88 (2%)
Query: 107 FHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNS 166
FHEEERTRNKQIQASIA+IFQRQSEALVKRRTP KD F+TRPQRN R+A RRRR
Sbjct: 1 FHEEERTRNKQIQASIAQIFQRQSEALVKRRTPCKDNT--FVTRPQRNARSAQSRRRRIG 58
Query: 167 RGTEHQGSEDNEDENDDNGGKDSSSNDE 194
RG EH GSEDNEDENDDNGGKDSSSNDE
Sbjct: 59 RGAEHHGSEDNEDENDDNGGKDSSSNDE 86
>gi|71059767|emb|CAJ18427.1| Ring1 [Mus musculus]
Length = 377
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHR C +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDVLKNTMTTKECLHRLCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|2388783|emb|CAA04797.1| DRING protein [Drosophila melanogaster]
Length = 435
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
N+D LIS +YP ++YE A E+ + Q Q+ A +
Sbjct: 100 NFDLLISKIYPSREEYE----AIQEKVMAKFNQTQSQQALV 136
>gi|334323602|ref|XP_003340414.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING1-like [Monodelphis domestica]
Length = 408
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP ++YE +
Sbjct: 102 NFDALISKIYPSREEYEAHQ 121
>gi|237834067|ref|XP_002366331.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
gi|211963995|gb|EEA99190.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma
gondii ME49]
Length = 1440
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 57/80 (71%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
E+R D+ CPIC+GI + V +CLHRFC +CI+K +R G ECP CR H ASRR+LR D
Sbjct: 643 ELRCDLSCPICMGIFQNVVVVKDCLHRFCADCIEKCVRTGLRECPQCRIHVASRRALRPD 702
Query: 84 PNYDALISALYPDIDKYEEE 103
P ++ +++ L+PD+ +E +
Sbjct: 703 PIFERILNKLFPDVSAFEAK 722
>gi|355748462|gb|EHH52945.1| E3 ubiquitin-protein ligase RING1 [Macaca fascicularis]
Length = 401
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP ++YE +
Sbjct: 102 NFDALISKIYPSREEYEAHQ 121
>gi|195394708|ref|XP_002055984.1| GJ10686 [Drosophila virilis]
gi|194142693|gb|EDW59096.1| GJ10686 [Drosophila virilis]
Length = 443
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYEEEE 104
N+D LIS +YP ++YE +
Sbjct: 100 NFDLLISKIYPSREEYEASQ 119
>gi|395533944|ref|XP_003769009.1| PREDICTED: E3 ubiquitin-protein ligase RING1 [Sarcophilus harrisii]
Length = 481
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 115 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 174
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP ++YE +
Sbjct: 175 NFDALISKIYPSREEYEAHQ 194
>gi|14290582|gb|AAH09070.1| Ring finger protein 1 [Mus musculus]
Length = 377
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHR C +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRLCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 73 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMP 132
Query: 140 GKD 142
G D
Sbjct: 133 GSD 135
>gi|195113599|ref|XP_002001355.1| GI10743 [Drosophila mojavensis]
gi|193917949|gb|EDW16816.1| GI10743 [Drosophila mojavensis]
Length = 440
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++KKT T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 40 LHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADP 99
Query: 85 NYDALISALYPDIDKYE 101
N+D LIS +YP ++YE
Sbjct: 100 NFDLLISKIYPSREEYE 116
>gi|449682260|ref|XP_002161941.2| PREDICTED: E3 ubiquitin-protein ligase RING2-like [Hydra
magnipapillata]
Length = 325
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++ T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLTNTMTTKECLHRFCHDCIITALRAGNKECPTCRKKLISKRSLRPDP 101
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ 117
N+D+LI+ +YP+ D+YE +E A + + N+Q
Sbjct: 102 NFDSLIAKIYPNRDEYEAHQEQALEKLHQHTNQQ 135
>gi|348545246|ref|XP_003460091.1| PREDICTED: E3 ubiquitin-protein ligase RING2-A-like [Oreochromis
niloticus]
Length = 329
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR SRRSLR D
Sbjct: 42 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDS 101
Query: 85 NYDALISALYPDIDKYEEEELAFHEE-ERTRNKQ-IQASIAKIFQRQS 130
N+DALIS +YP D+YE + E R NK+ + +SI + ++Q+
Sbjct: 102 NFDALISKIYPSRDEYEAHQRRVIERLNRLHNKEALSSSIEEGLRQQA 149
>gi|345316757|ref|XP_001506883.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ornithorhynchus
anatinus]
Length = 160
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 50 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 109
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP ++YE +
Sbjct: 110 NFDALISKIYPSREEYEAHQ 129
>gi|326437562|gb|EGD83132.1| ring finger protein 1 [Salpingoeca sp. ATCC 50818]
Length = 348
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD 82
PE+ ++CPICL +I++T EC+HRFC ECI +S+R ECP CR CAS+R LR
Sbjct: 29 PELVAQMKCPICLNLIEETMAT-ECMHRFCGECIKRSLRHSKKECPTCRKPCASKRVLRR 87
Query: 83 DPNYDALISALYPDIDKYE--EEELAFHEEERTRNKQIQASIAKIFQRQS 130
DPN+D LI L+PD D E +E+L + T + + S+ + Q Q+
Sbjct: 88 DPNFDELIQTLFPDPDVVEDYQEQLMERLHQTTNMRAVAQSMQEGMQHQA 137
>gi|63169173|gb|AAY34709.1| ring finger protein 1 [Bos taurus]
gi|124054128|gb|ABM89251.1| RING1 [Pongo pygmaeus]
Length = 122
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP ++YE +
Sbjct: 73 NFDALISKIYPSREEYEAHQ 92
>gi|52350624|gb|AAH82771.1| Ring1 protein [Mus musculus]
Length = 154
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 13 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 72
Query: 85 NYDALISALYPDIDKYEEEE 104
N+DALIS +YP ++YE +
Sbjct: 73 NFDALISKIYPSREEYEAHQ 92
>gi|339243901|ref|XP_003377876.1| ATPase, AAA family [Trichinella spiralis]
gi|316973259|gb|EFV56879.1| ATPase, AAA family [Trichinella spiralis]
Length = 1151
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 30 QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDAL 89
CPICL ++K T T ECLHRFC++CI ++R GN ECP CR S+RSLR DPN+D +
Sbjct: 55 MCPICLDMLKNTMTTKECLHRFCQDCITTALRSGNKECPTCRCKLVSKRSLRPDPNFDGI 114
Query: 90 ISALYPDIDKYEEEELAFHEEERTRNKQI--QASIAKIFQRQSE 131
I+ +YP ++Y+ E ++ + + I Q SI + + QS+
Sbjct: 115 ITKIYPSREEYDAMEAEAFDKMKKHHSTISLQRSIQEGMKFQSQ 158
>gi|242039063|ref|XP_002466926.1| hypothetical protein SORBIDRAFT_01g016823 [Sorghum bicolor]
gi|241920780|gb|EER93924.1| hypothetical protein SORBIDRAFT_01g016823 [Sorghum bicolor]
Length = 143
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 258 TRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQP 317
TRS TRH S SG N + + R+ KLVE LR+ +N+ E DV L L+ D Q AP+L++
Sbjct: 1 TRSQTRHSSFSGSNGRMVKGGRMIKLVECLRNSDDNDGERDVHLCLLPLDGQTAPNLEKS 60
Query: 318 YLCCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQE 377
YLCC P+LS+KQLC++V+ QT + EEVE+ +K + N + P+ L G++
Sbjct: 61 YLCCGPTLSIKQLCQFVASQTSHKDEEVEMYALKP---SYSNPVSTNPSGLDKARLAGEQ 117
Query: 378 TLAGLRVNHTSNTDHLILAYRQK 400
L+ LR + T L L Y K
Sbjct: 118 RLSDLRSSFTFPNGVLELVYAIK 140
>gi|320162947|gb|EFW39846.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 309
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
+P +QCP+CL +I+ +ECLHRFC ECI ++R+G +CP+CR +RRSLR
Sbjct: 47 IPLTFAPLQCPVCLCLIQNAHGNIECLHRFCEECITSAVRMGPKQCPSCRGSLPTRRSLR 106
Query: 82 DDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQ 129
D N D L++A+Y D +++E+++ + E+ R KQ Q + K+ +R+
Sbjct: 107 HDSNLDQLVAAMYGDHEQFEKQQNEYSAEQ-IRRKQAQTLVLKLPRRE 153
>gi|193652565|ref|XP_001945787.1| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Acyrthosiphon
pisum]
Length = 332
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 38/222 (17%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V L I KD+ CPICL ++ KT +CLHRFC ECI ++R GN +CP CR S+R
Sbjct: 37 VPLESIHKDLMCPICLELLNKTMAT-KCLHRFCSECIVTALRAGNKKCPTCRKRLISKRC 95
Query: 80 LRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS-EALVKRRT 138
LR D N D LIS L+P+ +++ E RNK I+ + Q QS + +VK T
Sbjct: 96 LRPDHNIDLLISKLFPNREEFNEH----------RNKIIE----NLNQSQSHDNIVKSMT 141
Query: 139 PGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSE----DNEDENDDNGGKDSSSNDE 194
G + Q+ R+ + + +R++ T+ S + D+N E
Sbjct: 142 EG--------LKIQKQKRSYNTKNKRSAEQTKSSSSNMLAPSTSSQVDNNVT-------E 186
Query: 195 RSAEVRPRRRKRRSGIRSSQPSSSAANSDG---GCIENDLEV 233
+ + ++K+ +G+ S+ +S+ DG G +D+E+
Sbjct: 187 STVQTNGTKKKKITGLDSATVTSNIIECDGAFDGVSSSDMEL 228
>gi|224000760|ref|XP_002290052.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
gi|220973474|gb|EED91804.1| hypothetical protein THAPSDRAFT_268817 [Thalassiosira pseudonana
CCMP1335]
Length = 331
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG-NNECPACRTHCAS 76
V V+L + + CP+CL IK+TR V ECLHRFC ECI K +R+ ECP CR H S
Sbjct: 86 VRVQLKVLSPEFHCPVCLSYIKQTRIVKECLHRFCNECIQKCLRVSPKKECPQCRVHIPS 145
Query: 77 RRSLRDDPNYDALISALY 94
RRSLR DPN+D LI ++Y
Sbjct: 146 RRSLRPDPNFDNLIKSIY 163
>gi|343781184|pdb|3RPG|C Chain C, Bmi1RING1B-Ubch5c Complex Structure
Length = 121
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 50 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 109
Query: 85 NYDALISALYP 95
N+DALIS +YP
Sbjct: 110 NFDALISKIYP 120
>gi|167521153|ref|XP_001744915.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776529|gb|EDQ90148.1| predicted protein [Monosiga brevicollis MX1]
Length = 91
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
C +CL +++ T T+ ECLHRFC +CI+KS+RLG ECP CRT C SRRSLR D D +I
Sbjct: 1 CAVCLNLLENTMTMKECLHRFCNDCIEKSLRLGRKECPTCRTSCPSRRSLRHDARIDGII 60
Query: 91 SALYPDIDKYE 101
ALYPD +YE
Sbjct: 61 HALYPDRQEYE 71
>gi|323454311|gb|EGB10181.1| hypothetical protein AURANDRAFT_9162, partial [Aureococcus
anophagefferens]
Length = 58
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 47/58 (81%)
Query: 37 IIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALY 94
I+ KT+ VMECLHRFC ECI K +R+G NECP+CR H SRRSLR DPN+DALIS +Y
Sbjct: 1 ILHKTKIVMECLHRFCSECIQKCLRVGKNECPSCRIHVPSRRSLRPDPNFDALISKIY 58
>gi|109158141|pdb|2H0D|B Chain B, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 100
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 50/70 (71%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 31 LHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDP 90
Query: 85 NYDALISALY 94
N+DALIS +Y
Sbjct: 91 NFDALISKIY 100
>gi|429329911|gb|AFZ81670.1| hypothetical protein BEWA_010870 [Babesia equi]
Length = 301
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+R ++ C IC GI+ K + CLHRFC CI+K +R+G ECP CR H SRR L+ DP
Sbjct: 52 LRDEISCAICSGIVHKCVVIKTCLHRFCSSCIEKCVRIGLRECPKCRKHVPSRRFLKPDP 111
Query: 85 NYDALISALYPDIDKYEE 102
YD++IS L P++ +EE
Sbjct: 112 IYDSIISRLIPNVKVFEE 129
>gi|170594563|ref|XP_001902033.1| ring finger protein 1 [Brugia malayi]
gi|158590977|gb|EDP29592.1| ring finger protein 1, putative [Brugia malayi]
Length = 494
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
CPICL ++ T T ECLHRFC ECI ++ GN ECP CR S+RSLR DPN+DALI
Sbjct: 50 CPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALI 109
Query: 91 SALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS--EALVKRRTPGKDTASPFM 148
+ ++PD YE Q+Q ++F +QS EAL K G +
Sbjct: 110 NKIWPDRQIYE---------------QMQQKAMEMFHQQSNVEALQKSIEAGMKAQA--A 152
Query: 149 TRPQR-NPRTAHLRRRRNSRGTEHQGSEDNE-DENDDNGGKDSSSND 193
R QR + +R+R R H S +N D N G + ND
Sbjct: 153 NRRQRVQGSYDYEKRKRRPRSDVHDRSYNNSPDSNSPEGSGEGDEND 199
>gi|402586446|gb|EJW80384.1| hypothetical protein WUBG_08707 [Wuchereria bancrofti]
Length = 492
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
CPICL ++ T T ECLHRFC ECI ++ GN ECP CR S+RSLR DPN+DALI
Sbjct: 50 CPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALI 109
Query: 91 SALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS--EALVKRRTPGKDTASPFM 148
+ ++PD YE Q+Q ++F +QS EAL K G +
Sbjct: 110 NKIWPDRQIYE---------------QMQQKAMEMFHQQSNVEALQKSIEAGMKAQA--A 152
Query: 149 TRPQR-NPRTAHLRRRRNSRGTEHQGSEDNE-DENDDNGGKDSSSND 193
R QR + +R+R R H S +N D N G + ND
Sbjct: 153 NRRQRVQGSYDYEKRKRRPRSDLHDRSYNNSPDSNSPEGSGEGDEND 199
>gi|66359826|ref|XP_627091.1| RING finger containing protein [Cryptosporidium parvum Iowa II]
gi|46228519|gb|EAK89389.1| RING finger containing protein [Cryptosporidium parvum Iowa II]
Length = 302
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ D C IC I+++T V +CLHRFC ECI+K +R+G ECP CR H ASRRSLR+D
Sbjct: 72 DLYSDFNCLICFRILQRTMVVKDCLHRFCGECIEKCVRIGLRECPQCRLHIASRRSLRND 131
Query: 84 PNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTP 139
D L L+P+ ++E H+E N Q +Q++ ++ VK + P
Sbjct: 132 SIMDTLTLRLFPEASEFERR----HQEILISNNIKQFKNIMDYQKEPDSKVKDQEP 183
>gi|312067777|ref|XP_003136903.1| ring finger protein 1 [Loa loa]
Length = 515
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 94/199 (47%), Gaps = 30/199 (15%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
CPICL ++ T T ECLHRFC ECI ++ GN ECP CR S+RSLR DPN+DALI
Sbjct: 50 CPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALI 109
Query: 91 SALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS--EALVKRRTPGKDTASPFM 148
+ ++PD YE Q+Q ++F +QS EAL K G +
Sbjct: 110 NKIWPDRQIYE---------------QMQQKAMEMFHQQSNVEALQKSIEAGMKAQA--A 152
Query: 149 TRPQR-NPRTAHLRRRRNSRGTEHQGSEDNE-DENDDNGGKDSSSNDERSAEVRPRRRKR 206
R QR + +R+R R H S N D N G + ND + R +
Sbjct: 153 NRRQRVQGSYDYEKRKRRPRSDVHDRSYYNSPDSNSPEGSGEGDEND-----LHARHDES 207
Query: 207 RSGIRSSQPS----SSAAN 221
SG +S S SAAN
Sbjct: 208 VSGAHTSASSIVNLVSAAN 226
>gi|393912535|gb|EFO27171.2| ring finger protein 1 [Loa loa]
Length = 491
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 82/167 (49%), Gaps = 21/167 (12%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
CPICL ++ T T ECLHRFC ECI ++ GN ECP CR S+RSLR DPN+DALI
Sbjct: 50 CPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALI 109
Query: 91 SALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS--EALVKRRTPGKDTASPFM 148
+ ++PD YE Q+Q ++F +QS EAL K G +
Sbjct: 110 NKIWPDRQIYE---------------QMQQKAMEMFHQQSNVEALQKSIEAGMKAQA--A 152
Query: 149 TRPQR-NPRTAHLRRRRNSRGTEHQGSEDNE-DENDDNGGKDSSSND 193
R QR + +R+R R H S N D N G + ND
Sbjct: 153 NRRQRVQGSYDYEKRKRRPRSDVHDRSYYNSPDSNSPEGSGEGDEND 199
>gi|209876968|ref|XP_002139926.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209555532|gb|EEA05577.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 304
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ D C IC I+++T V +CLHRFC CI+K +R+G ECP CR H ASRRSLR D
Sbjct: 73 DLYSDFNCSICFKILRRTMVVKDCLHRFCNSCIEKCVRIGLRECPQCRLHIASRRSLRSD 132
Query: 84 PNYDALISALYPDIDKYEEEELAFHEEERTRN 115
D + S L+P + ++E++ HEE N
Sbjct: 133 SIMDTVASRLFPKVAEFEKQ----HEEMVIEN 160
>gi|324509377|gb|ADY43948.1| E3 ubiquitin-protein ligase RING2 [Ascaris suum]
Length = 524
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 17/107 (15%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
CPICL ++ T T ECLHRFC ECI ++ GN ECP CR S+RSLR DPN+DALI
Sbjct: 51 CPICLDLLTTTMTTKECLHRFCSECITTALLRGNKECPTCRKKLVSKRSLRPDPNFDALI 110
Query: 91 SALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQS--EALVK 135
+ ++PD YE Q+Q IF +QS EAL K
Sbjct: 111 NKIWPDRQIYE---------------QMQQKAMDIFHQQSNVEALQK 142
>gi|403223591|dbj|BAM41721.1| uncharacterized protein TOT_040000102 [Theileria orientalis strain
Shintoku]
Length = 298
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+R+++ CPIC GI+ + + CLHRFC CI K +R+G +ECP CR H S+R L+ DP
Sbjct: 52 LREEISCPICSGIVLRCVVIKTCLHRFCLNCIQKCVRIGLHECPKCRKHVPSKRFLKADP 111
Query: 85 NYDALISALYPDIDKYEEEELAF 107
YD++IS + +++ +E+ AF
Sbjct: 112 IYDSIISRIVTNVEIFEKLSDAF 134
>gi|84997477|ref|XP_953460.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304456|emb|CAI76835.1| hypothetical protein, conserved [Theileria annulata]
Length = 286
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+R+++ C IC GII K + CLHRFC CI+K +R+G CP CR H SRR R+DP
Sbjct: 52 LREELTCAICSGIISKCVVIKTCLHRFCSNCIEKCVRVGTRGCPKCRKHVPSRRFFRNDP 111
Query: 85 NYDALISALYPDIDKYEE 102
YD+LIS + +++ +EE
Sbjct: 112 IYDSLISRIISNVEVFEE 129
>gi|71029646|ref|XP_764466.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351420|gb|EAN32183.1| hypothetical protein TP04_0829 [Theileria parva]
Length = 301
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+R+++ C IC GII K + CLHRFC CI+K +R+G CP CR H SRR R DP
Sbjct: 52 LREELTCAICSGIISKCVVIKTCLHRFCSNCIEKCVRVGTRGCPKCRKHVPSRRFFRTDP 111
Query: 85 NYDALISALYPDIDKYEE 102
YD+LIS + +++ +EE
Sbjct: 112 IYDSLISRIITNVEVFEE 129
>gi|449267318|gb|EMC78279.1| E3 ubiquitin-protein ligase RING2-A, partial [Columba livia]
Length = 124
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECLHRFC +CI ++R GN ECP CR S+RSLR DP
Sbjct: 17 LHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDP 76
Query: 85 NYDAL 89
N+DAL
Sbjct: 77 NFDAL 81
>gi|313224953|emb|CBY20745.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 45/62 (72%)
Query: 43 TVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEE 102
T ECLHRFC+ECI ++R GN ECP CR SRRSLR DP +DALI+ LYP D+YE+
Sbjct: 2 TTKECLHRFCQECITTALRSGNKECPTCRKRLVSRRSLRHDPIFDALIAKLYPARDEYEK 61
Query: 103 EE 104
+
Sbjct: 62 HQ 63
>gi|148910395|gb|ABR18274.1| unknown [Picea sitchensis]
Length = 169
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 92/167 (55%), Gaps = 29/167 (17%)
Query: 263 RHGSASGCNSKSSRSTRLNKLVEYL--RSLQENNDELDVRLMLV-SADTQCAPSLQQPYL 319
R+GS SG NSK++R R+ K+V YL ++ +E+ +E D++ L+ S + + PSL+ PYL
Sbjct: 2 RYGSVSGSNSKNARGMRVAKMVNYLLSKAREEDENEFDIQFTLLPSENDENLPSLETPYL 61
Query: 320 CCQPSLSVKQLCEYVSLQTPLQAEEVEILMVKER-LDAKGNQST---------------- 362
CC P++SV LC+ ++LQ L AE++EI++ K+R L G+QS
Sbjct: 62 CCSPTVSVNHLCKLLALQLSLPAEDLEIVVEKQRNLIEPGSQSNFSHLGKPGKGKPTLGA 121
Query: 363 -----PIPTTDQ----LQILEGQETLAGLRVNHTSNTDHLILAYRQK 400
I Q ++LE + TLA + +T +L L YR+K
Sbjct: 122 SENQRVIEVLQQEATLAEVLEQEATLAEIFSYYTGCRGNLALTYRRK 168
>gi|412992642|emb|CCO18622.1| predicted protein [Bathycoccus prasinos]
Length = 666
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++R D +C IC G +K TV CLHRFC +C+ +S+R CP CR ASRR D
Sbjct: 88 DVRADTRCSICWGTVKNCVTVRVCLHRFCNDCVQESIRKNQMCCPECRAKVASRRDFVKD 147
Query: 84 PNYDALISALYP---DIDKYEEEELAFHEEERT 113
P +DA++SA+Y + Y+E+E F +E T
Sbjct: 148 PKFDAIVSAIYAAKGGAESYDEKEERFSRKEAT 180
>gi|119579142|gb|EAW58738.1| hCG1642036 [Homo sapiens]
Length = 138
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V + D+ CPICL ++K T T E LHRFC +C ++R GN EC C S+
Sbjct: 17 IVVSPRSLHSDLMCPICLDMLKNTMTTKESLHRFCADCNIIALRSGNKECLTCWKKLVSK 76
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEE 104
RS R DP +DALIS +YP D+YE +
Sbjct: 77 RSPRPDPKFDALISKIYPSRDEYEAHQ 103
>gi|302854907|ref|XP_002958957.1| hypothetical protein VOLCADRAFT_108389 [Volvox carteri f.
nagariensis]
gi|300255703|gb|EFJ39992.1| hypothetical protein VOLCADRAFT_108389 [Volvox carteri f.
nagariensis]
Length = 663
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 33 ICLGIIKKTRTVMECLHRFCRECIDKSMR---LGNNECPACRTHCASRRSLRDDPNYDAL 89
+C GI+K+T T CLHRFC CIDK + + +CP CR + SRRSLR DPN+D L
Sbjct: 178 VCCGILKETVTSTVCLHRFCAACIDKCLAGRPPQHKDCPVCRANLHSRRSLRPDPNFDRL 237
Query: 90 ISALYPDIDKYEEEE---LAFHEEERTRNKQIQASIAKIFQRQSE 131
+ ALY D+ Y ++E +A H + + +A A++ + QSE
Sbjct: 238 LRALYGDVVVYGQQEDSLVAAHNRAVAQAAR-EAQTAQLSRAQSE 281
>gi|145478225|ref|XP_001425135.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392203|emb|CAK57737.1| unnamed protein product [Paramecium tetraurelia]
Length = 273
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCASRRS 79
++ +I ++QCPICL + ++ + +C HRFC+ECI+KS+R + CP CR A+RR
Sbjct: 45 QVAKIFDELQCPICLSLFEQPVYIKDCSHRFCKECIEKSIRFQREKSCPTCRKKIATRRD 104
Query: 80 LRDDPNYDALISALYPDIDKYE-EEELAFHEE------ERTRNKQIQASIAKIFQRQS 130
LR D + +++ + PDI +Y +EEL +E ++ +N ++Q +A+ QS
Sbjct: 105 LRVDEVVNKILNTVVPDIKQYRMQEELLIQQEIKNFRQQKQKNDKLQKFVAQTNTNQS 162
>gi|297845774|ref|XP_002890768.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336610|gb|EFH67027.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 210
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 20/156 (12%)
Query: 249 EMLAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADT 308
E L WG+ G RS S + + L VE Q N+E+D++++LVS DT
Sbjct: 69 ESLKWGKRGKRS---------MRSGTCKRHMLENHVE-----QHKNNEMDIQVLLVSMDT 114
Query: 309 QCAPSLQQPYLCCQPSLSVKQLCE-YVSLQTPLQAEEVEILMVKERLDAKGNQSTPI-PT 366
P+LQ P + C+P++++K LCE YV+ Q EE+E+ +V E + +S I P
Sbjct: 115 SVIPNLQNPQVSCKPNVTMKSLCEMYVAPYVEAQVEEIEMFVVNELV----TESRVIDPH 170
Query: 367 TDQLQILEGQETLAGLRVNHTSNTDHLILAYRQKQS 402
D++QI++ ++ + GL + N H+I+ Y + S
Sbjct: 171 KDRVQIVKKEDNVGGLMRMYDFNKGHVIIGYMKTPS 206
>gi|297612063|ref|NP_001068133.2| Os11g0574200 [Oryza sativa Japonica Group]
gi|255680205|dbj|BAF28496.2| Os11g0574200 [Oryza sativa Japonica Group]
Length = 775
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 104/205 (50%), Gaps = 31/205 (15%)
Query: 64 NNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIA 123
N+ECPACRT AS SL+ DPN+DALI LYPD+ K +EEE EE+T K+IQAS
Sbjct: 14 NDECPACRT-LASSHSLKVDPNFDALILTLYPDLHK-DEEEELAFTEEKTCRKKIQASTD 71
Query: 124 KIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGT-----EHQGSEDNE 178
+ R+ EAL K+R+ K S +R Q N L R+R G G +D E
Sbjct: 72 EAPHRRKEALGKKRSAAKAIGS---SRSQGN----MLARKRGHIGFPDIVPSKVGGKDRE 124
Query: 179 DENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDLEVGRESR 238
END++G + S DE S +++ ++R RR + S P+ G I L+ +R
Sbjct: 125 -ENDNSGCDEWSLFDEYSQDIK-KKRARRCLVPRSSPA-------GHKISTTLKKDAHAR 175
Query: 239 GISPGLVWN--------PEMLAWGR 255
G +W P++ W R
Sbjct: 176 SFECGQIWALYSEVDKFPKLYGWIR 200
>gi|403335250|gb|EJY66800.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 642
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
F ++ EI + CP+CL I+K V CLH+FC CI+ RL +CP CR + SRR
Sbjct: 91 FTDIKEI---LHCPVCLDILKDPLNVKMCLHKFCAHCIENYNRLIKKQCPQCRKYIGSRR 147
Query: 79 SLRDDPNYDALISALYPDIDKYEE-EELAFHEE 110
LR D +I AL DID + + EE A EE
Sbjct: 148 LLRSDYKLAYIIKALITDIDAFNKFEEQARKEE 180
>gi|145552431|ref|XP_001461891.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429728|emb|CAK94518.1| unnamed protein product [Paramecium tetraurelia]
Length = 276
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 70/112 (62%), Gaps = 8/112 (7%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCASRRS 79
+L +I+ ++CPICL + K+ + +C HRFC+ECI+KS+R + CP CR A+RR
Sbjct: 45 QLVKIQDYLKCPICLSLFKQAVYIKDCSHRFCKECIEKSIRSQREKSCPTCRKKIATRRD 104
Query: 80 LRDDPNYDALISALYPDIDKYE-EEELAFHEE------ERTRNKQIQASIAK 124
LR D +++ + PD+++Y +E+L +E ++ +N++IQ +++
Sbjct: 105 LRVDEIVSKMLNTVVPDMEQYRIQEDLQIQQEIKNFSQQKQKNEEIQKLVSQ 156
>gi|399218630|emb|CCF75517.1| unnamed protein product [Babesia microti strain RI]
Length = 310
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+R + C IC GII+ + CLHRFC CI+K R G ECP CR H S+R L D
Sbjct: 51 LRDHLCCVICSGIIQNCVVIKTCLHRFCSTCIEKCFRSGIRECPQCRKHVPSKRFLHHDA 110
Query: 85 NYDALISALYPDIDKYEEEELAF 107
+D++I+ L+P++ K + ++ F
Sbjct: 111 IFDSIITTLFPNV-KVTDLDIIF 132
>gi|301780836|ref|XP_002925842.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
RING2-like [Ailuropoda melanoleuca]
Length = 359
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNEC--------- 67
FV V P + + CP+C+ +K T T E L FC EC ++ GN EC
Sbjct: 38 FV-VSPPSLHSEFMCPVCVDTLKNTMTAKERLRCFCAECTITALGSGNKECLGVPGWCKY 96
Query: 68 PACRTHCASRRSLRDDPNYDALISALYPDIDKYE---EEELAF 107
P C S RSLR DPN+DALIS +YP +YE E ELA
Sbjct: 97 PTCWKMLVSERSLRPDPNFDALISKIYPSCGEYEVHQERELAM 139
>gi|428181687|gb|EKX50550.1| hypothetical protein GUITHDRAFT_66750, partial [Guillardia theta
CCMP2712]
Length = 117
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
I D C IC+ II +T + +CLHRFC +CI + +R ECP+CRT AS+R L D
Sbjct: 21 IDSDFTCAICMNIISETTIITDCLHRFCADCITQCLRHSKRECPSCRTPVASQRKLVRDA 80
Query: 85 NYDALISALYPDIDKYEE------EELAFHE 109
++D +I +Y D+ + E E AF +
Sbjct: 81 DFDTMICKMYRDVSELREIQDVKAAEFAFSD 111
>gi|67594414|ref|XP_665797.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656638|gb|EAL35571.1| hypothetical protein Chro.80216, partial [Cryptosporidium hominis]
Length = 132
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ D C IC I+++T V +CLHRFC ECI+K +R+G ECP CR H ASRRSLR+D
Sbjct: 72 DLYSDFNCLICFRILQRTMVVKDCLHRFCGECIEKCVRIGLRECPQCRLHIASRRSLRND 131
>gi|384246349|gb|EIE19839.1| hypothetical protein COCSUDRAFT_58076 [Coccomyxa subellipsoidea
C-169]
Length = 263
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRR 78
++L + + +C +CLGI+K R V C+HRFC +CI+K +R+ + CP CR SRR
Sbjct: 3 IDLSSLEAETRCSVCLGIVKSCRLVSGCMHRFCADCIEKWLRVASEPSCPQCRVQMQSRR 62
Query: 79 SLRDDPNYDALISALYPDIDKYEEE 103
+ D +D L+ LY ++ YE +
Sbjct: 63 DCKRDVRFDRLLKLLYTNLRSYEAQ 87
>gi|55978743|gb|AAV68833.1| hypothetical protein AT1G28327 [Arabidopsis thaliana]
Length = 274
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 83/148 (56%), Gaps = 17/148 (11%)
Query: 251 LAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQC 310
L WG+ G RS R G+ + + L ++ + DE+D++++LVS D
Sbjct: 139 LQWGKRGKRS-MRKGTW-----------KRHILENHVGQHKNTQDEMDIQVLLVSMDASV 186
Query: 311 APSLQQPYLCCQPSLSVKQLCE-YVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQ 369
P+LQ P + C+P++++K LCE YV+ QAE++E+ +VKE + + P D+
Sbjct: 187 IPNLQNPQVSCKPNVTLKSLCEMYVAPYVEAQAEKIEMYVVKELV---AELTMIDPHRDR 243
Query: 370 LQILEGQETLAGLRVNHTSNTDHLILAY 397
++I+ ++++ GLR+ + N ++I+ Y
Sbjct: 244 VEIVNKEDSVGGLRM-YNFNNGYVIIGY 270
>gi|79354820|ref|NP_174154.2| uncharacterized protein [Arabidopsis thaliana]
gi|332192832|gb|AEE30953.1| uncharacterized protein [Arabidopsis thaliana]
Length = 274
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 83/148 (56%), Gaps = 17/148 (11%)
Query: 251 LAWGRGGTRSNTRHGSASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSADTQC 310
L WG+ G RS R G+ + + L ++ + DE+D++++LVS D
Sbjct: 139 LQWGKRGKRS-MRKGTW-----------KRHILENHVGQHKNTQDEMDIQVLLVSMDASV 186
Query: 311 APSLQQPYLCCQPSLSVKQLCE-YVSLQTPLQAEEVEILMVKERLDAKGNQSTPIPTTDQ 369
P+LQ P + C+P++++K LCE YV+ QAE++E+ +VKE + + P D+
Sbjct: 187 IPNLQNPQVSCKPNVTLKSLCEMYVAPYVEAQAEKIEMYVVKELV---AELTMIDPHRDR 243
Query: 370 LQILEGQETLAGLRVNHTSNTDHLILAY 397
++I+ ++++ GLR+ + N ++I+ Y
Sbjct: 244 VEIVNKEDSVGGLRM-YNFNNGYVIIGY 270
>gi|403347191|gb|EJY73013.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 378
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 20 VELPEIRKD-VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+EL + KD +QCP+C I + V CLH+FC CID R ECP CR SRR
Sbjct: 95 LELFNLIKDTLQCPVCFDIYQSPVIVKPCLHKFCNNCIDAYNRKIKKECPGCRHQIGSRR 154
Query: 79 SLRDDPNYDALISALYPDIDKYEEEELAFHEE 110
LR+D +IS L +ID++ + E EE
Sbjct: 155 MLRNDYKISNIISTLISNIDEFNKLEQIKREE 186
>gi|395512454|ref|XP_003760454.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
RING1-like [Sarcophilus harrisii]
Length = 438
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ V P ++ ++ PI L ++K T ECLH F CI + GN ECP R +
Sbjct: 35 IDVSPPSLQLELMFPIYLDMLKNTXDTKECLHHFSXNCIVTVLXSGNKECPTSRQKLVLK 94
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAK 124
SL +PN+DALIS +YP +E+ R N+Q +SI +
Sbjct: 95 WSLXAEPNFDALISQIYPS-----QEDCVIIGLSRLHNQQALSSIVE 136
>gi|146162240|ref|XP_001009052.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila]
gi|146146486|gb|EAR88807.2| hypothetical protein TTHERM_00263030 [Tetrahymena thermophila
SB210]
Length = 447
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTHCASRRSLRDDPNYDAL 89
CPICL I ++ V C HRFC+ECI+K++R +CP CR ++R LR D N +
Sbjct: 50 CPICLDIFQEPVYVKGCSHRFCKECIEKAIRSSKMKQCPTCRRIIGTKRLLRVDFNVQEI 109
Query: 90 ISALYPDIDKYEE 102
I+ +Y DI K+ E
Sbjct: 110 INLIYGDISKFLE 122
>gi|303289823|ref|XP_003064199.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454515|gb|EEH51821.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 71
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++L ++R D +C +C G +KK + V CLHRFC CI++ +R NN CP CR ASRR
Sbjct: 8 LKLGDVRPDTRCAVCWGTLKKVKVVSPCLHRFCGACIEEHIRKLNNHCPTCRVPVASRRV 67
Query: 80 LRDD 83
LR+D
Sbjct: 68 LRED 71
>gi|403340560|gb|EJY69568.1| Zinc finger (C3HC4 RING finger) protein, putative [Oxytricha
trifallax]
Length = 555
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDA 88
QCP+C I + CLH FC+ CI+ +R ECP C+ + ++R LR + ++
Sbjct: 80 FQCPLCKEIAADPGVIKHCLHFFCKNCIETCIRQYKKECPMCKKNMGTKRELRRNRAFEN 139
Query: 89 LISALYPDIDKYEEEELAFHEE 110
+I L DI+ Y++ + A +E
Sbjct: 140 IIKVLSKDIEIYQDNQSALFKE 161
>gi|403368698|gb|EJY84188.1| hypothetical protein OXYTRI_18072 [Oxytricha trifallax]
Length = 528
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTHCASRRSL 80
L +I +CPICL I + V EC H+FCREC +K RL C CR +RR L
Sbjct: 36 LEDILDLFRCPICLDIFEMPVKVKECGHQFCRECAEKYGRLFKPAHCALCRNQIMTRRDL 95
Query: 81 RDDPNYDALISALYPDIDKYE 101
R D +LI+ PD+ Y+
Sbjct: 96 RIDMQLISLINKFIPDVRAYK 116
>gi|403374159|gb|EJY87017.1| hypothetical protein OXYTRI_07538 [Oxytricha trifallax]
Length = 531
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTHCASRRSL 80
L +I +CPICL I + V EC H+FCREC +K RL C CR +RR L
Sbjct: 36 LEDILDLFRCPICLDIFEMPVKVKECGHQFCRECAEKYGRLFKPAHCALCRNQIMTRRDL 95
Query: 81 RDDPNYDALISALYPDIDKYE 101
R D +LI+ PD+ Y+
Sbjct: 96 RIDMQLISLINKFIPDVRAYK 116
>gi|194376320|dbj|BAG62919.1| unnamed protein product [Homo sapiens]
Length = 386
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 25/123 (20%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ ++ CPICL ++K T T ECP CR S+RSLR DP
Sbjct: 42 LHSELMCPICLDMLKNTMT--------------------TKECPTCRKKLVSKRSLRPDP 81
Query: 85 NYDALISALYPDIDKYE-EEELAFHEEERTRNKQ-IQASIAKIFQRQS---EALVKRRTP 139
N+DALIS +YP ++YE ++ R N+Q + +SI + + Q+ V+R P
Sbjct: 82 NFDALISKIYPSREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPIP 141
Query: 140 GKD 142
G D
Sbjct: 142 GSD 144
>gi|341874458|gb|EGT30393.1| hypothetical protein CAEBREN_21765 [Caenorhabditis brenneri]
Length = 2806
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++ E+ + C +C +I+ + +C HRFC +CI ++ N CPACR + AS+R
Sbjct: 198 ADMKEVIGSLSCDVCQEVIQMSVVTKKCGHRFCDQCILITLLRAGNTCPACRQNLASKRE 257
Query: 80 LRDDPNYDALISAL 93
L+ DP +D LI +
Sbjct: 258 LQQDPRFDQLIHQM 271
>gi|402593332|gb|EJW87259.1| hypothetical protein WUBG_01829 [Wuchereria bancrofti]
Length = 544
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ I K+++C IC I+ T V C+HRFC +CI + + G +CP+C +
Sbjct: 41 IHFDWISKELECGICEKTIQNTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTP 100
Query: 80 LRDDPNYDALISALY 94
L+ D N+DA+I+ ++
Sbjct: 101 LKSDANFDAIINKMW 115
>gi|393908615|gb|EJD75133.1| hypothetical protein LOAG_17668 [Loa loa]
Length = 536
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V I K+++C IC I+ T V C+HRFC +CI + + G +CP+C +
Sbjct: 41 VHFDWISKELECGICEKTIQNTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTP 100
Query: 80 LRDDPNYDALISALYPDIDK-------YEEEELAFHEEERTRNKQIQASIAKIFQRQSEA 132
L+ D N+DA+I+ +++ E L F ++ K +AK +
Sbjct: 101 LKSDANFDAIINKFTLSVERRCVKRPITESSNLCFTKKRVFDKKSPIKRLAKSDPVVPSS 160
Query: 133 LVKRRTPGKDTAS 145
+R +P AS
Sbjct: 161 SSERASPKNTKAS 173
>gi|312099279|ref|XP_003149304.1| hypothetical protein LOAG_13753 [Loa loa]
Length = 175
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V I K+++C IC I+ T V C+HRFC +CI + + G +CP+C +
Sbjct: 41 VHFDWISKELECGICEKTIQNTMVVRNCMHRFCADCILQRIHTGARKCPSCHKVLPKKTP 100
Query: 80 LRDDPNYDALISALYPDIDK-------YEEEELAFHEEERTRNKQIQASIAKIFQRQSEA 132
L+ D N+DA+I+ +++ E L F ++ K +AK +
Sbjct: 101 LKSDANFDAIINKFTLSVERRCVKRPITESSNLCFTKKRVFDKKSPIKRLAKSDPVVPSS 160
Query: 133 LVKRRTPGKDTAS 145
+R +P AS
Sbjct: 161 SSERASPKNTKAS 173
>gi|357161750|ref|XP_003579192.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 479
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTH--CASRRSLRDDPN 85
+ CP+C +++ T+ ECLH FCR+CI K + + N CP C+ CA LR D N
Sbjct: 87 ITCPLCQRYLREATTICECLHTFCRKCIYKKLAVEELNHCPVCKIDLGCAPAEKLRADHN 146
Query: 86 YDALISALYP 95
AL S L P
Sbjct: 147 LQALRSKLIP 156
>gi|325192720|emb|CCA27133.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 239
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN---NECPACRTHCASR--R 78
+I + C +C G + +T+ ECLH FC CI +S N ++CP C H +
Sbjct: 28 DINRHFICTLCNGYFRDAQTIKECLHTFCNGCI-RSYFWRNRDAHKCPTCSVHLGVKPWT 86
Query: 79 SLRDDPNYDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRR 137
L DP+ LIS ++PD + E +EEL F++ + K+I I + ++ A V +
Sbjct: 87 QLISDPSIQGLISKIFPDPTQQEKKEELKFYKHLSIKRKEI------IREAKAHAGVPIK 140
Query: 138 TPGKDTASPFMTRPQRNPR 156
F PQR+P+
Sbjct: 141 RARAVRRLQFEVHPQRSPK 159
>gi|167533065|ref|XP_001748213.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773333|gb|EDQ86974.1| predicted protein [Monosiga brevicollis MX1]
Length = 381
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC---AS 76
V++ ++ + + C IC+G I T+ ECLH FCR CI K R + CP C A
Sbjct: 158 VKMVDVNQYIVCQICMGYIVNATTISECLHSFCRSCIVKHFR-KSKICPVCNQQAHETAP 216
Query: 77 RRSLRDDPNYDALISALYPDI 97
+LR D ++I+ L PD+
Sbjct: 217 LDTLRQDRTLQSIINKLLPDV 237
>gi|268579167|ref|XP_002644566.1| C. briggsae CBR-SPAT-3 protein [Caenorhabditis briggsae]
Length = 2691
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
C +C +I+ + +C HRFC +CI S+ N CP CR + S+R L+ DP +D LI
Sbjct: 284 CDVCQEVIQHSIVNKKCGHRFCDQCILVSIMRSGNTCPTCRQNLGSKRELQQDPRFDQLI 343
Query: 91 SAL 93
+
Sbjct: 344 DQV 346
>gi|392925881|ref|NP_001024904.2| Protein SPAT-3, isoform a [Caenorhabditis elegans]
gi|351049594|emb|CCD63270.1| Protein SPAT-3, isoform a [Caenorhabditis elegans]
Length = 2476
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
C +C +I+ + +C HRFC +CI + N CP CR + S+R L+ DP +D LI
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKRELQQDPRFDQLI 221
>gi|7507801|pir||T16870 hypothetical protein T13H2.3 - Caenorhabditis elegans
Length = 2447
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
C +C +I+ + +C HRFC +CI + N CP CR + S+R L+ DP +D LI
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCRQNLGSKRELQQDPRFDQLI 221
>gi|308512539|ref|XP_003118452.1| CRE-SPAT-3 protein [Caenorhabditis remanei]
gi|308239098|gb|EFO83050.1| CRE-SPAT-3 protein [Caenorhabditis remanei]
Length = 2826
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
C +C +I+++ +C HRFC +CI + N CP CR + S+R L+ DP +D I
Sbjct: 166 CHVCQEVIQQSIVTKKCGHRFCDQCIIVAFIRSGNTCPTCRQNLGSKRELQQDPRFDQFI 225
>gi|426232409|ref|XP_004010216.1| PREDICTED: uncharacterized protein LOC101107965 [Ovis aries]
Length = 286
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 24/216 (11%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCGGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCRIVIHQSHP 64
Query: 80 LR---DDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKR 136
L+ D ++ L P E + ++ + A + Q L+
Sbjct: 65 LQYIGHDRTMQDIVYKLVP----------GLQEVKGPQSPRWDLRAAAVCQGPEPLLLGG 114
Query: 137 RTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQ--------GSEDNEDENDDNGGKD 188
D P RP + RT H R S+GT + G+ +G ++
Sbjct: 115 PEETGDQLGP--GRPAASERTVHSVRGPGSKGTTSRDLPPQPGLGARGRTQTGAGSGAEN 172
Query: 189 SSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDG 224
S+ D +S+ V R R R+ ++ +SS+A S G
Sbjct: 173 RSTGDPQSSGVPHRLRTRQQSAPETRLASSSALSRG 208
>gi|219127250|ref|XP_002183852.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404575|gb|EEC44521.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 780
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 13 FFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN----ECP 68
CR + EL + K + CP+CL + T + C H +CR C+ +++ G+ CP
Sbjct: 50 VLCRTLQKELHNMGKALSCPLCLSTYRDAVT-LPCCHAYCRSCLTQALATGSARRPPTCP 108
Query: 69 ACRTHCASRRSLRDDPNYDALISA 92
C+ A RRSL D P + L+ A
Sbjct: 109 CCQQRTAGRRSLTDAPKLNELVRA 132
>gi|328721666|ref|XP_001943283.2| PREDICTED: hypothetical protein LOC100162794 [Acyrthosiphon pisum]
Length = 1082
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V+L ++ + + C +CLG + +++ECLH FCR CI + NN CP CR + +
Sbjct: 29 VKLTDVNRQLICVLCLGYLVDATSIVECLHSFCRSCIVLHLD-KNNFCPICREDIQNSKV 87
Query: 80 LRDDPNYDALISALYPDIDKYE-EEELAFHEEERTRNKQIQ 119
L+ D ++ L P + E + F+++ R+ +Q
Sbjct: 88 LKPDKALQDIVYKLVPGLYHSEMKRRQEFYQKHPHRDMHLQ 128
>gi|307103510|gb|EFN51769.1| hypothetical protein CHLNCDRAFT_139722 [Chlorella variabilis]
Length = 597
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 48 LHRFCRECIDKSMRLG-NNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEEEELA 106
+HRFC++CI+ +R N CP CR +S+R + DP +D L+ ++ D++++E++ L
Sbjct: 1 MHRFCKDCIEAWLRTQIENNCPQCRVKFSSKRDCKPDPVFDLLLGTMFGDVEEFEKQMLD 60
Query: 107 FHEEERTRNKQIQASIAKIFQRQSEALVKRRTP 139
E + K + IA + +A +R +P
Sbjct: 61 PSLEVLQQAKAVGQQIALA---KEQAAARRPSP 90
>gi|45383782|ref|NP_989500.1| breast cancer 1, early onset [Gallus gallus]
gi|15081211|gb|AAK83825.1|AF355273_1 breast and ovarian cancer susceptibility-like protein [Gallus
gallus]
Length = 1749
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRR 78
L ++K+++CP+CL +IK+ + +C H FCR C+ K + + G +CP C+T ++R
Sbjct: 15 LSAMQKNLECPVCLDVIKEPVST-KCDHVFCRFCMFKLLSRKKKGVIQCPLCKTE-VTKR 72
Query: 79 SLRDDPNYDALISALYPDIDKYE 101
SL+++ + LI L I +E
Sbjct: 73 SLKENSRFKQLIEGLLEAISAFE 95
>gi|363746252|ref|XP_003643585.1| PREDICTED: E3 ubiquitin-protein ligase RING2-B-like, partial
[Gallus gallus]
Length = 193
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 64 NNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYE 101
N ECP CR S+RSLR DPN+DALIS +YP D+YE
Sbjct: 3 NKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYE 40
>gi|125537292|gb|EAY83780.1| hypothetical protein OsI_38996 [Oryza sativa Indica Group]
gi|125579972|gb|EAZ21118.1| hypothetical protein OsJ_36761 [Oryza sativa Japonica Group]
Length = 470
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRT 72
V V+ + + + CP+C I++ TV ECLH FCR+CI K + N+E CP C+
Sbjct: 60 VVMVKRELLARCMTCPLCRRILRDATTVSECLHTFCRKCIYKKI---NDEELEHCPVCKI 116
Query: 73 H--CASRRSLRDDPNYDALISALYPDIDK---YEEEELAFHEEERTRNKQIQASIAKIFQ 127
CA LR D N + S ++P K EE E + + + I + + +
Sbjct: 117 DLGCAPLEKLRADHNIQDVRSKIFPLKRKKVNAEEVESPIAPPAKRKERSISSLVVNTPE 176
Query: 128 RQSEALVKRRT 138
++L RRT
Sbjct: 177 ITPKSLTGRRT 187
>gi|449491308|ref|XP_002195279.2| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Taeniopygia guttata]
Length = 1803
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRR 78
L ++K+++CPICL ++++ + +C H FCR C+ K + + G ECP C+T ++R
Sbjct: 15 LSAMQKNLECPICLDVVQEPVST-KCDHTFCRFCMFKLINKKKKGVVECPLCKTE-VTKR 72
Query: 79 SLRDDPNYDALISALYPDIDKYE 101
SL+++ + LI L I +E
Sbjct: 73 SLKENSRFKQLIEGLLEAIHAFE 95
>gi|301097065|ref|XP_002897628.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106846|gb|EEY64898.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 249
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL-GNNECPACRTHC 74
R + V+L E+ + + C +C GI++ T+ +CLH FC+ CI + + G+ CP C
Sbjct: 6 RTMTVKLAELTEHLGCVLCHGILRDAHTIPDCLHSFCKSCIYRHFLVKGSCICPKCNKVL 65
Query: 75 ASR--RSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRN 115
+ R +L D A++ ++P+ ++E EL +E T N
Sbjct: 66 SPRPIATLITDQKLQAVVDRIFPE---FKEHELVLEKEFYTTN 105
>gi|403370330|gb|EJY85028.1| Zinc finger, C3HC4 type domain-containing protein [Oxytricha
trifallax]
Length = 193
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACRTHCASR--RSLRDDP 84
++CP+C G + T+ ECL FC+ CI K N+ CP C H R ++ D
Sbjct: 25 LKCPLCTGFFRDAHTINECLDTFCKSCIYKYFYEDQNKENCPKCNIHLGGRPLETIISDQ 84
Query: 85 NYDALISALYPDIDKYEEEEL 105
++ LYP K +E+ +
Sbjct: 85 TIQKIVDLLYPQFKKKDEQAI 105
>gi|432922349|ref|XP_004080308.1| PREDICTED: uncharacterized protein LOC101160694 [Oryzias latipes]
Length = 1283
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK---SMRLGNNECPACRTHCASRR 78
+ ++ + +QCPICL ++ +C H+FC+ C+ K S + CP C++ +RR
Sbjct: 13 IADLWETLQCPICLDLMA-VPVSTKCDHKFCKFCMTKLLDSSKQNGASCPVCKSKI-TRR 70
Query: 79 SLRDDPNYDALISALYPDIDKYE 101
SLR+ P++ L++ L I YE
Sbjct: 71 SLRESPSFQKLVTGLQDIIQAYE 93
>gi|449455272|ref|XP_004145377.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis
sativus]
gi|449474218|ref|XP_004154108.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis
sativus]
Length = 430
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRT 72
R V V+ I + CP+C ++K+ T+ ECLH FCR+CI S ++ + E CP C
Sbjct: 4 RVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCI--SDKISDEEIENCPVCNI 61
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
CA LR D N + L + ++P
Sbjct: 62 DLGCAPLEKLRPDHNLEDLRAKIFP 86
>gi|449530319|ref|XP_004172143.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis
sativus]
Length = 430
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRT 72
R V V+ I + CP+C ++K+ T+ ECLH FCR+CI S ++ + E CP C
Sbjct: 4 RVVKVKREAIAACITCPLCNKLLKEATTISECLHTFCRKCI--SDKISDEEIENCPVCNI 61
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
CA LR D N + L + ++P
Sbjct: 62 DLGCAPLEKLRPDHNLEDLRAKIFP 86
>gi|260809325|ref|XP_002599456.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
gi|229284735|gb|EEN55468.1| hypothetical protein BRAFLDRAFT_223875 [Branchiostoma floridae]
Length = 280
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 62/146 (42%), Gaps = 18/146 (12%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
R + + E+ + C IC G T++ECLH FC+ CI K + + CP C
Sbjct: 3 RTTHLPITELNPHLMCVICGGYFIDATTIIECLHSFCKTCIVKYLD-TSKYCPVCDVQVH 61
Query: 76 SRRSL---RDDPNYDALISALYPDIDK------------YEEEELAFHEEERTRNKQIQA 120
R L R D +L+ L P++ K Y +++LA EER + +Q
Sbjct: 62 KTRPLLNIRADKTLQSLVYKLVPNLFKDEMKRRRDFYGQYPDQDLAASSEERGEVEDLQ- 120
Query: 121 SIAKIFQRQSEALVKRRTPGKDTASP 146
I + S +L R P K SP
Sbjct: 121 -IYTPDEHISLSLEYYREPEKQDTSP 145
>gi|255073295|ref|XP_002500322.1| predicted protein [Micromonas sp. RCC299]
gi|226515584|gb|ACO61580.1| predicted protein [Micromonas sp. RCC299]
Length = 180
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG---NNECPAC 70
V++ ++ K V CPIC + TVMECLH FC ECI KS++ G NN CP C
Sbjct: 14 VDMDQLLKAVGCPICGEMFTHPVTVMECLHTFCHECIVKSVQPGRGANNVCPTC 67
>gi|327275572|ref|XP_003222547.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Anolis carolinensis]
Length = 1360
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR--LGNNECPACRTHCASRRSLRD 82
++K+++CPICL ++K+ + C H FCR C K +R G +CP C ++RSLR+
Sbjct: 18 LQKNLECPICLDVMKEPVST-NCAHIFCRFCTLKLLRQKTGVTQCPLCNAK-VTKRSLRE 75
Query: 83 DPNYDALISALYPDIDKYEEEE-LAFHEEERTRNKQIQA-SIAKIFQRQ 129
D + +I + I +E + L F +++ K +A S+A ++ Q
Sbjct: 76 DVRFKQVIKVVLDVIRAFERDTGLKFSDDQCFPKKDTEATSVADSWKEQ 124
>gi|390352349|ref|XP_783799.2| PREDICTED: polycomb group RING finger protein 2-like
[Strongylocentrotus purpuratus]
Length = 479
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ ++ K + C +C G I +++ECLH FCR CI + + + +CP C T R
Sbjct: 7 LKITDLNKHLTCSLCKGYIVDATSIIECLHSFCRSCIVRYLHT-SKQCPVCDTQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQ 129
L R D L+ L P + K E+ E + Q S+A+ R+
Sbjct: 66 LLNIRSDKTLQNLVYKLVPSMFK---GEMKRRREFYKSHPQASTSLAQTVSRE 115
>gi|348684604|gb|EGZ24419.1| hypothetical protein PHYSODRAFT_478652 [Phytophthora sojae]
Length = 251
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 15/154 (9%)
Query: 15 CRFVFVE-------LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE- 66
C +F E + +I + + C +C G ++ TV ECLH FC CI + +
Sbjct: 17 CNVMFAEARTETLRMADINEFLICKLCKGYLRDPYTVKECLHTFCHGCIRGFYLYDSTKS 76
Query: 67 --CPACRTHCASR--RSLRDDPNYDALISALYPDI-DKYEEEELAFHEEERTRNKQIQAS 121
CP C ++ + DP L L PD K EEEE F+ + + K++ A
Sbjct: 77 CSCPTCHVRLGAKPWAHIIPDPAMKELTEKLLPDYRAKEEEEESVFYAKLGIKRKRVDAP 136
Query: 122 IAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNP 155
+R R P PF PQR P
Sbjct: 137 ATP--RRSRMKTSGPRGPSPGNMIPFEIYPQRGP 168
>gi|449490725|ref|XP_004158688.1| PREDICTED: LOW QUALITY PROTEIN: protein BREAST CANCER
SUSCEPTIBILITY 1 homolog [Cucumis sativus]
Length = 1072
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ +++CPICL ++ T + + C H FC CI+KSM+ G+N CP C+ RR +R
Sbjct: 7 LEKMGIELKCPICLSLLNSTVS-LGCNHVFCNVCIEKSMKSGSN-CPVCKVP-YRRREVR 63
Query: 82 DDPNYDALIS 91
P+ D L+S
Sbjct: 64 PAPHMDNLVS 73
>gi|390346383|ref|XP_787592.3| PREDICTED: polycomb group RING finger protein 3-like
[Strongylocentrotus purpuratus]
Length = 309
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR-------- 71
V L EI +++ C +C G + T+ ECLH FC+ C+ K + NN CP CR
Sbjct: 36 VFLYEINENITCKLCRGYLIDATTITECLHTFCKSCLVKYLE-ENNTCPTCRILIHQSHP 94
Query: 72 -THCASRRSLRDDPNYDALISALYPDIDKYEE-EELAFHE 109
T+ R+++D ++ L P++ K EE E F+E
Sbjct: 95 LTYVGFDRTMQD------IVYKLVPNLLKSEERREKEFYE 128
>gi|156551978|ref|XP_001602634.1| PREDICTED: hypothetical protein LOC100118736 [Nasonia vitripennis]
Length = 1304
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC--ASRRSLR 81
E+ + CP+C G + TV+ECLH FCR CI K + N +CP C+ H ++ +++
Sbjct: 12 EVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLN-KNAQCPTCK-HLLNTAKPNIK 69
Query: 82 DDPNYDALISALYPDIDKYEEEELAFHEEERTR 114
D ++ L P + +H+E R R
Sbjct: 70 ADKALQDIVYKLVPGL---------YHKEMRKR 93
>gi|449434236|ref|XP_004134902.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
[Cucumis sativus]
Length = 1100
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYD 87
+++CPICL ++ T + + C H FC CI+KSM+ G+N CP C+ RR +R P+ D
Sbjct: 13 ELKCPICLSLLNSTVS-LGCNHVFCNVCIEKSMKSGSN-CPVCKVP-YRRREVRPAPHMD 69
Query: 88 ALIS 91
L+S
Sbjct: 70 NLVS 73
>gi|293331779|ref|NP_001168287.1| uncharacterized LOC100382051 [Zea mays]
gi|223947229|gb|ACN27698.1| unknown [Zea mays]
gi|414877923|tpg|DAA55054.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 486
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTH--CASRRSLRDDPN 85
+ CP+C ++++ T+ ECLH FCR+CI K + + + CP C+ C LR D N
Sbjct: 82 LTCPLCDHLLRQATTISECLHTFCRKCIYKKLNDEDLDHCPVCKIDLGCTPVEKLRADHN 141
Query: 86 YDALISALYPDIDK---YEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRT 138
+ S +P K EE E + + + I + + + AL RRT
Sbjct: 142 IQDVRSKFFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNTPRVTPAALTGRRT 197
>gi|348679361|gb|EGZ19177.1| hypothetical protein PHYSODRAFT_490527 [Phytophthora sojae]
Length = 253
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL-GNNECPACRTHC 74
R V V+L E+ + + C +C GI++ T+ +CLH FC+ CI + + G+ CP C
Sbjct: 6 RTVTVKLAELTEHLGCALCHGILRDAHTIPDCLHSFCKSCIYRHFLVKGSCVCPKCNKTL 65
Query: 75 ASR--RSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRN 115
+ R +L D ++ ++P+ ++E+E+ +E +N
Sbjct: 66 SPRPITTLITDQKLQEVVDRIFPE---FKEQEVILEKEFYAKN 105
>gi|383857689|ref|XP_003704336.1| PREDICTED: uncharacterized protein LOC100877547 [Megachile
rotundata]
Length = 834
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ + + CP+C G + T+MECLH FCR CI + + G CP C + A+ L D
Sbjct: 28 DLNEHIVCPLCRGYLIDATTLMECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLLPD 85
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ + P + + E E
Sbjct: 86 VKLQRLVYLVVPGLFRSELE 105
>gi|260826672|ref|XP_002608289.1| hypothetical protein BRAFLDRAFT_87969 [Branchiostoma floridae]
gi|229293640|gb|EEN64299.1| hypothetical protein BRAFLDRAFT_87969 [Branchiostoma floridae]
Length = 1122
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
EI +D +CP+CLG + RT + C H FC CID S++ ECP C+ +RR + D
Sbjct: 989 EIEEDEKCPVCLGRVGDPRT-LACRHTFCSSCIDMSIK-SKPECPVCKMPLGNRRGNQPD 1046
Query: 84 PNYDALI--SALYPDIDKYEEEELAFH 108
+ + S P ++Y + +H
Sbjct: 1047 GSMAHRVDQSVRLPGYERYGTIVIDYH 1073
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + +++ CPICL ++ + + C H FC CI KSM+ G+N CP C+ RR +R
Sbjct: 461 LERMGRELNCPICLSLLNSAVS-LTCNHVFCNSCIMKSMKSGSN-CPVCKVP-YGRREVR 517
Query: 82 DDPNYDALIS 91
P+ D+L+S
Sbjct: 518 PVPHMDSLVS 527
>gi|62638180|gb|AAX92675.1| BRCA1-like protein [Monodelphis domestica]
Length = 1844
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + C H FCR C+ K S + G ++CP C+ + ++RSLR+
Sbjct: 22 MQKILECPICLELIKEPVSTT-CDHIFCRFCMLKLLSKKKGPSQCPLCKNNI-TKRSLRE 79
Query: 83 DPNYDALISALYPDIDKYE 101
++ L+ L I +E
Sbjct: 80 STRFNQLVEGLLKTIRAFE 98
>gi|77020291|ref|NP_001029141.1| breast cancer type 1 susceptibility protein [Monodelphis domestica]
Length = 1840
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + C H FCR C+ K S + G ++CP C+ + ++RSLR+
Sbjct: 18 MQKILECPICLELIKEPVSTT-CDHIFCRFCMLKLLSKKKGPSQCPLCKNNI-TKRSLRE 75
Query: 83 DPNYDALISALYPDIDKYE 101
++ L+ L I +E
Sbjct: 76 STRFNQLVEGLLKTIRAFE 94
>gi|359483657|ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
vinifera]
Length = 1044
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + +++ CPICL ++ + + C H FC CI KSM+ G+N CP C+ RR +R
Sbjct: 7 LERMGRELNCPICLSLLN-SAVSLTCNHVFCNSCIMKSMKSGSN-CPVCKVP-YGRREVR 63
Query: 82 DDPNYDALIS 91
P+ D+L+S
Sbjct: 64 PVPHMDSLVS 73
>gi|298715142|emb|CBJ27830.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 890
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
EL E+RK ++C +C KK R + +C H FC C++KS++ N +CPAC
Sbjct: 826 AELGELRKMIKCSVCQDK-KKNRVITKCFHMFCDGCLEKSIKSRNRKCPAC 875
>gi|328777331|ref|XP_003249319.1| PREDICTED: hypothetical protein LOC100576671 [Apis mellifera]
Length = 867
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ + + CP+C G + T++ECLH FCR CI + + G CP C + A+ L D
Sbjct: 23 DLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLLPD 80
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ + P + + E E
Sbjct: 81 VKLQRLVYLMVPGLFRSELE 100
>gi|302784943|ref|XP_002974243.1| hypothetical protein SELMODRAFT_414577 [Selaginella
moellendorffii]
gi|300157841|gb|EFJ24465.1| hypothetical protein SELMODRAFT_414577 [Selaginella
moellendorffii]
Length = 946
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++++CPICL + ++ V+ C H FC+ CI S++ G CP C+ A+RR +R
Sbjct: 5 LERFGRELKCPICLSLFQQA-AVLSCTHCFCKPCILTSLK-GMPFCPVCKVP-ATRREVR 61
Query: 82 DDPNYDALISALYPDID 98
P D ++ +Y DI+
Sbjct: 62 PSPKMDNVV-GIYRDIE 77
>gi|226479778|emb|CAX73185.1| Polycomb complex protein BMI-1 [Schistosoma japonicum]
Length = 354
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT-------HCASRRSLR 81
+ C +C G + T++ECLH FCR CI ++L N CP C T HCA +R
Sbjct: 16 LTCNLCRGYLIDATTIVECLHSFCRSCILTYLKL-NTTCPVCETLLHKTKPHCA----IR 70
Query: 82 DDPNYDALISALYPDIDKYEEEELA---FHE 109
D A++ L P++ +E+E L F+E
Sbjct: 71 PDRALQAIVYKLIPNL--FEKEMLCRRKFYE 99
>gi|197111886|gb|ACH43057.1| BMI1-like protein [Schistosoma japonicum]
Length = 354
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT-------HCASRRSLR 81
+ C +C G + T++ECLH FCR CI ++L N CP C T HCA +R
Sbjct: 16 LTCNLCRGYLIDATTIVECLHSFCRSCILTYLKL-NTTCPVCETLLHKTKPHCA----IR 70
Query: 82 DDPNYDALISALYPDIDKYEEEELA---FHE 109
D A++ L P++ +E+E L F+E
Sbjct: 71 PDRALQAIVYKLIPNL--FEKEMLCRRKFYE 99
>gi|357115329|ref|XP_003559442.1| PREDICTED: E3 ubiquitin protein ligase DRIP1-like [Brachypodium
distachyon]
Length = 449
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH--CASRRSLRDDPN 85
+ CP+C G+++ EC+H FCRECI K + E CP C + A LR D N
Sbjct: 19 LTCPLCRGLLRDAHAFTECVHTFCRECIMKKIDDEEIESCPVCNIYLGIAPEEKLRPDNN 78
Query: 86 YDALISALYP 95
AL L+P
Sbjct: 79 IQALRKRLFP 88
>gi|380012177|ref|XP_003690163.1| PREDICTED: uncharacterized protein LOC100863675 [Apis florea]
Length = 846
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ + + CP+C G + T++ECLH FCR CI + + G CP C + A+ L D
Sbjct: 13 DLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLLPD 70
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ + P + + E E
Sbjct: 71 VKLQRLVYLMVPGLFRSELE 90
>gi|393009465|gb|AFN02447.1| posterior sex combs [Bombyx mori]
Length = 1096
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR-SL 80
L E+ + + CP+C G T++ECLH FCR CI K ++ + CP C S + ++
Sbjct: 29 LGEVNEHITCPLCRGYYIDATTIVECLHSFCRSCIIKHLK-AKSYCPVCEMMINSAKPNI 87
Query: 81 RDDPNYDALISALYPDIDKYEEE 103
+ D ++ L P + + E E
Sbjct: 88 KLDKALQDIVYKLVPGLFQKEME 110
>gi|391337288|ref|XP_003743002.1| PREDICTED: uncharacterized protein LOC100900541 [Metaseiulus
occidentalis]
Length = 1015
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTHCASR 77
+L ++ + CP+C G T++ECLH FCR CI K L N+ CP C+ A
Sbjct: 5 KLVDVNDHLTCPLCHGYFVDATTIVECLHSFCRTCIIK--HLSKNQFPFCPVCKFQLAGT 62
Query: 78 R---SLRDDPNYDALISALYPDIDKYE 101
+ LR D ++ L P + + E
Sbjct: 63 KLHQYLRSDSTLQDIVYKLVPSLFRNE 89
>gi|71027873|ref|XP_763580.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350533|gb|EAN31297.1| hypothetical protein TP03_0552 [Theileria parva]
Length = 735
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G RF L +I + CP+C G+ +T+ +C+H FC+ C+ S CP C
Sbjct: 256 GLDVRFNLTILIDI---LTCPLCKGLFHNAQTIRDCMHTFCKSCLILSTFENGLVCPTCF 312
Query: 72 THCAS--RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
+ S + D N ++ L+P + E++L +ER +N +I KI
Sbjct: 313 SPILSSITEGVEPDTNIQTIVDKLFPHFAQ-NEQKLIDEMKERKKNYKISLQDNKI 367
>gi|395532615|ref|XP_003768365.1| PREDICTED: polycomb group RING finger protein 2 [Sarcophilus
harrisii]
Length = 289
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 6 IPLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN 65
+PL + R +++ E+ + C +C G T++ECLH FC+ CI + + N
Sbjct: 7 LPLFYPSIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNK 65
Query: 66 ECPACRTHCASRR---SLRDDPNYDALISALYPDIDKYE 101
CP C R S+R D ++ L P + K E
Sbjct: 66 YCPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDE 104
>gi|224061053|ref|XP_002300335.1| predicted protein [Populus trichocarpa]
gi|222847593|gb|EEE85140.1| predicted protein [Populus trichocarpa]
Length = 1029
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ ++++CPICL ++ T + C H FC CI KSM+ G ++CP C+ RR +R
Sbjct: 33 LEKMGRELKCPICLSLLD-TAVSLTCNHVFCNSCIVKSMKSG-SDCPVCKVP-YRRREVR 89
Query: 82 DDPNYDALIS 91
P+ D L+S
Sbjct: 90 AAPHMDNLVS 99
>gi|302760615|ref|XP_002963730.1| hypothetical protein SELMODRAFT_438486 [Selaginella
moellendorffii]
gi|300168998|gb|EFJ35601.1| hypothetical protein SELMODRAFT_438486 [Selaginella
moellendorffii]
Length = 378
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH--CASRRSLRDDPN 85
+ CP+C ++ + T+ ECLH FCRECI + + + CP C + A LR DP
Sbjct: 15 LTCPLCSSLLDEATTICECLHSFCRECIHLKLSEDDTQSCPICDVYLGVAPLEKLRPDPQ 74
Query: 86 YDALISALY 94
D L + L+
Sbjct: 75 LDELRNKLF 83
>gi|255580467|ref|XP_002531059.1| brca1 associated ring domain, putative [Ricinus communis]
gi|223529354|gb|EEF31320.1| brca1 associated ring domain, putative [Ricinus communis]
Length = 987
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ L ++ +++CPICL ++ + + C H FC CI KSM+ G+N CP C+ RR
Sbjct: 5 IHLEKMGTELKCPICLSLLN-SAVSLTCNHIFCNSCIVKSMKSGSN-CPVCKVP-YQRRE 61
Query: 80 LRDDPNYDALIS 91
+R P+ D L++
Sbjct: 62 VRAAPHMDNLVN 73
>gi|350426395|ref|XP_003494425.1| PREDICTED: hypothetical protein LOC100748744 [Bombus impatiens]
Length = 849
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ + + CP+C G + T++ECLH FCR CI + + G CP C + A+ L D
Sbjct: 26 DLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLLPD 83
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ + P + + E E
Sbjct: 84 VKLQRLVYLVVPGLFRSELE 103
>gi|256087612|ref|XP_002579960.1| polycomb complex protein bmi-1 [Schistosoma mansoni]
gi|353229282|emb|CCD75453.1| putative polycomb complex protein bmi-1 [Schistosoma mansoni]
Length = 353
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 17/91 (18%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT-------HCASRRSLR 81
+ C +C G + T++ECLH FCR CI ++L N CP C T HCA +R
Sbjct: 16 LTCNLCRGYLIDATTIVECLHSFCRSCILTYLKL-NTTCPVCATLLHKTKPHCA----IR 70
Query: 82 DDPNYDALISALYPDIDKYEEEELA---FHE 109
D +++ L P++ +E+E L F+E
Sbjct: 71 PDRALQSIVYKLIPNL--FEKEMLCRRKFYE 99
>gi|332811389|ref|XP_003308686.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 1 [Pan
troglodytes]
gi|397489265|ref|XP_003815651.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Pan
paniscus]
gi|402857837|ref|XP_003893445.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Papio
anubis]
gi|426333042|ref|XP_004028096.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Gorilla
gorilla gorilla]
gi|441624474|ref|XP_004088993.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Nomascus
leucogenys]
gi|119611593|gb|EAW91187.1| ring finger protein 2, isoform CRA_a [Homo sapiens]
gi|193787177|dbj|BAG52383.1| unnamed protein product [Homo sapiens]
Length = 264
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 63
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|403266317|ref|XP_003925336.1| PREDICTED: E3 ubiquitin-protein ligase RING2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 264
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 63
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|340723698|ref|XP_003400226.1| PREDICTED: hypothetical protein LOC100648837 [Bombus terrestris]
Length = 843
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ + + CP+C G + T++ECLH FCR CI + + G CP C + A+ L D
Sbjct: 23 DLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--NVATSPPLLPD 80
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ + P + + E E
Sbjct: 81 VKLQRLVYLVVPGLFRSELE 100
>gi|307208978|gb|EFN86178.1| Polycomb group protein Psc [Harpegnathos saltator]
Length = 1598
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC--ASRRS 79
L E+ + CP+C G + TV+ECLH FCR CI K + + CP+C+ H ++ +
Sbjct: 10 LHEVNPHLICPLCRGYLIDATTVVECLHSFCRSCILKHLS-KSAHCPSCK-HALNKAKPN 67
Query: 80 LRDDPNYDALISALYPDIDKYEEEELAFHEEERTR 114
++ D ++ L P + +H+E R R
Sbjct: 68 IKADKALQDIVYKLVPGL---------YHKEMRKR 93
>gi|302786086|ref|XP_002974814.1| hypothetical protein SELMODRAFT_414938 [Selaginella
moellendorffii]
gi|300157709|gb|EFJ24334.1| hypothetical protein SELMODRAFT_414938 [Selaginella
moellendorffii]
Length = 400
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH--CASRRSLRDDPN 85
+ CP+C ++ + T+ ECLH FCRECI + + + CP C + A LR DP
Sbjct: 15 LTCPLCSSLLDEATTICECLHSFCRECIHLKLSEDDTQSCPICDVYLGVAPLEKLRPDPQ 74
Query: 86 YDALISALY 94
D L + L+
Sbjct: 75 LDELRNKLF 83
>gi|428175643|gb|EKX44532.1| hypothetical protein GUITHDRAFT_163578 [Guillardia theta
CCMP2712]
Length = 427
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+ E+ ++ +CPICL + RT C H FC ECI + ++ ++ECP+CRT +RR+L
Sbjct: 14 VEELIQETKCPICLDFLIDPRTA-PCQHNFCEECICEYIKDNHSECPSCRTPGTNRRTL 71
>gi|332375530|gb|AEE62906.1| unknown [Dendroctonus ponderosae]
Length = 225
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++L + + C IC G + TV ECLH FC+ C+ K + NN CP C+
Sbjct: 7 IKLKTLNNHITCKICRGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPTCKIVIHQSHP 65
Query: 80 LRD---DPNYDALISALYPDIDKYE-EEELAFHEEERTRN 115
L+ D ++ L PD+ K E E E F++ R N
Sbjct: 66 LQYISFDRTMQDIVYKLVPDLQKNEIESEREFYKARRLPN 105
>gi|395825224|ref|XP_003785839.1| PREDICTED: E3 ubiquitin-protein ligase RING2 [Otolemur garnettii]
Length = 246
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 63
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|170589401|ref|XP_001899462.1| ring finger protein 2 [Brugia malayi]
gi|158593675|gb|EDP32270.1| ring finger protein 2, putative [Brugia malayi]
Length = 541
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 11 SGFFCRFVFVELPEIRKDVQC-PICLGI-IKKTRTVMECLHRFCRECIDKSMRLGNNECP 68
S F F+F+ L K+ C P L + + + + C+HRFC +CI + + G +CP
Sbjct: 14 SEFTILFMFLSL---LKNFSCLPQLLEVMVSYSFSFQNCMHRFCADCILQRIHTGARKCP 70
Query: 69 ACRTHCASRRSLRDDPNYDALISALY 94
+C + L+ D N+DA+I+ ++
Sbjct: 71 SCHKVLPKKTPLKSDANFDAIINKMW 96
>gi|156372680|ref|XP_001629164.1| predicted protein [Nematostella vectensis]
gi|156216158|gb|EDO37101.1| predicted protein [Nematostella vectensis]
Length = 241
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT---HCAS 76
+ + ++ + + C +C G + T++ECLH FCR CI K + NN CP C H
Sbjct: 6 MSMNQVNEHITCKLCNGYLIDATTIIECLHTFCRSCIVKYLH-ENNHCPTCNVFLHHSHP 64
Query: 77 RRSLRDDPNYDALISALYPDIDKYE 101
+ D ++ L P + ++E
Sbjct: 65 MNYISADRTMQEIVFKLVPGLQEWE 89
>gi|297281250|ref|XP_001108188.2| PREDICTED: e3 ubiquitin-protein ligase RING2-like [Macaca
mulatta]
Length = 206
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG 63
+ V + ++ CPICL ++K T T ECLHRFC +CI ++R G
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSG 83
>gi|344285136|ref|XP_003414319.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Loxodonta africana]
Length = 761
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ H ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNHI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIRAFE 94
>gi|224111060|ref|XP_002315733.1| predicted protein [Populus trichocarpa]
gi|222864773|gb|EEF01904.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRT 72
+ V V+ EI + CP+C + + T+ ECLH FCR+CI K ++ + E CP C T
Sbjct: 5 QVVKVQREEIAACMTCPLCNKLFRDATTISECLHTFCRKCIYK--KITDEELDSCPVCDT 62
Query: 73 H--CASRRSLRDDPNYDALISALY-PDIDKYEEEELA--FHEEERTRNKQIQASIAKIF- 126
C+ LR D ++ L + ++ + K +E E E+ER+ + + ++ K
Sbjct: 63 ELGCSPLEKLRADHSWQDLRAKIFLSNRKKAKEPETVSLVPEDERSLSSLVVSTPKKSVK 122
Query: 127 -------------QRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRG---TE 170
+R+S L+K D ++ P+ + A +R+ +S +
Sbjct: 123 SFLTGKRSKPIARKRESPVLIKELVKKVDDYYESLSSPETLSKIAQTKRQNSSTAESPKQ 182
Query: 171 HQGSEDNED 179
H+ ++ +ED
Sbjct: 183 HKPNKVSED 191
>gi|410895639|ref|XP_003961307.1| PREDICTED: uncharacterized protein LOC101064828 [Takifugu rubripes]
Length = 1279
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRRSLRDDPN 85
+QCPICL I+ + +C H+FC+ CI K + + CP C++ ++RSL++ P
Sbjct: 20 LQCPICLDILTAPVST-KCDHQFCKFCISKLLSNTKQNKANCPVCKSKI-TKRSLQESPG 77
Query: 86 YDALISALYPDIDKYEEE 103
+ L++ L I YE +
Sbjct: 78 FQRLVTGLQGMILAYEND 95
>gi|344285134|ref|XP_003414318.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Loxodonta africana]
Length = 1853
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 8 LKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNN 65
+ FS V L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G +
Sbjct: 1 MDFSVAHIEEVQNVLNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPS 59
Query: 66 ECPACRTHCASRRSLRDDPNYDALISALYPDIDKYE 101
+CP C+ H ++RSL++ + L+ L I +E
Sbjct: 60 QCPLCKNHI-TKRSLQESTRFSQLVEELLKIIRAFE 94
>gi|340723907|ref|XP_003400328.1| PREDICTED: hypothetical protein LOC100651499 [Bombus terrestris]
Length = 1412
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACRTHC--ASRRS 79
E+ + CP+C+G + TV+ECLH FCR CI K + N E CP+C+ H ++ +
Sbjct: 12 EVNPYLICPLCIGYLIDATTVVECLHSFCRSCILKHL---NREAHCPSCK-HVLNKAKPN 67
Query: 80 LRDDPNYDALISALYPDIDKYEEEELAFHEEERTR 114
++ D ++ L P + +H+E R R
Sbjct: 68 IKADKALQDIVYKLVPGL---------YHKEMRRR 93
>gi|348508869|ref|XP_003441975.1| PREDICTED: hypothetical protein LOC100708332 [Oreochromis
niloticus]
Length = 1366
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCREC----IDKSMRLGNNECPACRTHCASRRSLRDDP 84
+QCPICL ++ + +C H+FC+ C +DKS + N CP C++ ++RSL++ P
Sbjct: 20 LQCPICLDLMTAPVST-KCDHQFCKFCMMKLLDKSKQNKAN-CPVCKS-TVTKRSLQESP 76
Query: 85 NYDALISALYPDIDKYEEE 103
+ L++ L I YE +
Sbjct: 77 GFQKLVAGLQDMIQAYEHD 95
>gi|297737160|emb|CBI26361.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 2 AKYNIPLKFSGFFCRFVFVELPEIRKD--VQCPICLGIIKKTRTVMECLHRFCRECI-DK 58
A IP F + ++P R + C IC + T+ ECLH FCR+CI DK
Sbjct: 34 ANAKIPPCFGVWMMSGPVAKVPRERLAACMTCRICNKLFDDATTISECLHTFCRKCIFDK 93
Query: 59 SMRLGNNECPACRTH--CASRRSLRDDPNYDALISALYP 95
+ CP C T+ CA LR D N L + ++P
Sbjct: 94 ITEDELDYCPVCNTNLGCAPLEKLRPDHNLQDLTAKIFP 132
>gi|170059595|ref|XP_001865431.1| posterior sex combs protein [Culex quinquefasciatus]
gi|167878320|gb|EDS41703.1| posterior sex combs protein [Culex quinquefasciatus]
Length = 1324
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
+ L + + C +C G + T++ECLH FC CI K +R CP C ++
Sbjct: 40 IHLSSVNPYITCNLCKGYLIDATTIVECLHSFCHSCIMKHLR-TEQYCPQCEMMINKAKP 98
Query: 79 SLRDDPNYDALISALYPDIDKYEEEEL---AFHEEERTRNKQIQASIAKIFQR 128
+++ D A++ L P + YE+E L AF+ R QA++A QR
Sbjct: 99 NIKPDATLQAIVYKLVPGL--YEKELLRKRAFY-----RQHPDQAALATPEQR 144
>gi|219112611|ref|XP_002178057.1| sex comb extra [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410942|gb|EEC50871.1| sex comb extra [Phaeodactylum tricornutum CCAP 1055/1]
Length = 411
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT---HCASRR 78
L + + +C ICL I+ TRTV+ECLHRFC L ++ A + S+R
Sbjct: 171 LKALNAEFRCAICLDYIRSTRTVVECLHRFCEGWYLPDTVLKDHCVWAGMSAPYAVPSKR 230
Query: 79 SLRDDPNYDALISALYPD 96
SL DP++D +++++ D
Sbjct: 231 SLAADPDFDRIVNSILGD 248
>gi|410980897|ref|XP_003996810.1| PREDICTED: polycomb group RING finger protein 2 [Felis catus]
Length = 361
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 66
P G R +++ E+ + C +C G T++ECLH FC+ CI + + N
Sbjct: 11 PAPHPGIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKY 69
Query: 67 CPACRTHCASRR---SLRDDPNYDALISALYPDIDKYE 101
CP C R S+R D ++ L P + K E
Sbjct: 70 CPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDE 107
>gi|270339500|ref|YP_003331582.1| ubiquitin E3 ligase ICP0 [Felid herpesvirus 1]
gi|2502079|gb|AAB80763.1| ubiquitin E3 ligase ICP0 [Felid herpesvirus 1]
Length = 498
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 30 QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR-RSLRDDPNYDA 88
CPICL + M CLH+FC C+ + + L NN+CP C+T S S+ DD ++
Sbjct: 7 HCPICLDPMNDLTFTMPCLHKFCYSCLSRWVGL-NNKCPLCKTSVTSLIHSIEDDKIFEE 65
Query: 89 LISALYPDIDKYEEEEL---AFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTAS 145
+ LY + EEE L F E R I S+ + S + P +
Sbjct: 66 --TKLY-SPHREEEEYLDWDPFIWTEARRWANI--SLNSVRLENSTTVDTSGRPSDGAGN 120
Query: 146 PFMTRPQ 152
P TRP+
Sbjct: 121 PTSTRPR 127
>gi|281211863|gb|EFA86025.1| hypothetical protein PPL_01258 [Polysphondylium pallidum PN500]
Length = 467
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDA 88
++CPIC ++ C H FC CI K N CP CR AS LR++ D
Sbjct: 5 LKCPICFDFFDTALMIITCSHNFCSLCIKKYFSQPNLHCPICR-KAASTSELRNNRLLDE 63
Query: 89 LISALYPDIDK 99
L++AL ++K
Sbjct: 64 LVTALKQTLEK 74
>gi|224009894|ref|XP_002293905.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970577|gb|EED88914.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 355
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 19 FVELP--EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
FV+ P +R + C +C G + TV +CLH FCR C+ +G + CP C
Sbjct: 98 FVDFPVSNLRDHLICSLCKGYFRDPYTVADCLHSFCRSCLIAQFTVGRHRCPTCDI---- 153
Query: 77 RRSLRDDPNYDAL--------ISALYPDIDKYEEEE 104
SL DP + L + ++P + EE++
Sbjct: 154 --SLEPDPFREVLADRTLQEVVEKVFPWMQTKEEQD 187
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + ++++CPICL + + + C H FC CI KSM++ + CP C+ RR +R
Sbjct: 589 LERMGRELKCPICLSLYNSAVS-LSCNHVFCNACIVKSMKM-DATCPVCKIP-YHRREIR 645
Query: 82 DDPNYDALISALYPDID 98
P+ D+L+S +Y +++
Sbjct: 646 GAPHMDSLVS-IYKNME 661
>gi|395532332|ref|XP_003768224.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Sarcophilus harrisii]
Length = 1757
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + C H FC+ C+ K + + G ++CP C+ + ++RSLR+
Sbjct: 18 MQKILECPICLELIKEPVSTT-CDHIFCKFCMLKLLGKKKGPSQCPLCKNN-VTKRSLRE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I +E
Sbjct: 76 STRFKQLVEGLLKTIRAFE 94
>gi|327277255|ref|XP_003223381.1| PREDICTED: polycomb group RING finger protein 3-like [Anolis
carolinensis]
Length = 242
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCRIVIHQSHP 64
Query: 80 LR---DDPNYDALISALYPDIDKYE 101
L+ D ++ L PD+ + E
Sbjct: 65 LQYIGHDRTMQDIVYKLVPDLQEAE 89
>gi|356533743|ref|XP_003535419.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 436
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACR--THCASRRSLRDD 83
V CP+C + T+ EC H FCREC+DK + +L CP C C+ LR D
Sbjct: 31 VTCPLCNKFFRNATTISECCHSFCRECVDKKLIDEKL--KHCPICNRDLGCSPHDKLRPD 88
Query: 84 PNYDALISALYP 95
P L ++P
Sbjct: 89 PCLQDLRDKIFP 100
>gi|160333720|ref|NP_001103855.1| uncharacterized protein LOC560122 [Danio rerio]
gi|159155619|gb|AAI54546.1| Si:ch211-106h11.4 protein [Danio rerio]
gi|169154011|emb|CAQ13701.1| novel protein [Danio rerio]
Length = 455
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTHCASRRSLRDDPN 85
++ CPIC I K V+ C H FCREC+ + R + ECP CR RRS RDDP
Sbjct: 7 ENFSCPICHEIFKDP-VVLSCSHSFCRECLQQYWRAADIQECPVCR-----RRSSRDDPP 60
Query: 86 YDALISAL 93
+ ++ L
Sbjct: 61 NNLVLKNL 68
>gi|3377941|emb|CAA17526.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1331
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + ++++CPICL + + + C H FC CI KSM++ + CP C+ RR +R
Sbjct: 372 LERMGRELKCPICLSLYNSAVS-LSCNHVFCNACIVKSMKM-DATCPVCKIP-YHRREIR 428
Query: 82 DDPNYDALISALYPDID 98
P+ D+L+S +Y +++
Sbjct: 429 GAPHMDSLVS-IYKNME 444
>gi|40747978|gb|AAR89523.1| breast cancer 1 [Tetraodon nigroviridis]
Length = 1267
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRRSLRDDPN 85
+QCPICL ++ + + +C H+FCR C+ K + + CP C++ ++RSL++ P
Sbjct: 20 LQCPICLDLMSEPVST-KCDHQFCRFCMLKLLSNTKQNKANCPVCKSKI-TKRSLQESPG 77
Query: 86 YDALISALYPDIDKYE 101
+ L+S L I YE
Sbjct: 78 FQRLVSGLQEIILAYE 93
>gi|359477378|ref|XP_002280186.2| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis
vinifera]
Length = 429
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPN 85
+ C IC + T+ ECLH FCR+CI DK + CP C T+ CA LR D N
Sbjct: 18 MTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLGCAPLEKLRPDHN 77
Query: 86 YDALISALYP 95
L + ++P
Sbjct: 78 LQDLTAKIFP 87
>gi|359320397|ref|XP_548155.4| PREDICTED: polycomb group RING finger protein 2 [Canis lupus
familiaris]
Length = 376
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 66
P+ G R +++ E+ + C +C G T++ECLH FC+ CI + + N
Sbjct: 26 PVPHPGNMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKY 84
Query: 67 CPACRTHCASRR---SLRDDPNYDALISALYPDIDKYE 101
CP C R S+R D ++ L P + K E
Sbjct: 85 CPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDE 122
>gi|113681968|ref|NP_001038474.1| uncharacterized protein LOC563088 [Danio rerio]
Length = 453
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 84
D CP+C I K T ++ C H FC+EC+ + ++ N ECP CR RRS ++DP
Sbjct: 8 DYSCPVCQDIFK-TPVILSCSHSFCKECLQQFWKIKNTQECPVCR-----RRSSKEDP 59
>gi|79480107|ref|NP_193839.4| protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Arabidopsis
thaliana]
gi|75158839|sp|Q8RXD4.1|BRCA1_ARATH RecName: Full=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog;
Short=AtBRCA1
gi|19698963|gb|AAL91217.1| unknown protein [Arabidopsis thaliana]
gi|28372474|gb|AAO39850.1| BRCA1 [Arabidopsis thaliana]
gi|34365717|gb|AAQ65170.1| At4g21070 [Arabidopsis thaliana]
gi|332658996|gb|AEE84396.1| protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Arabidopsis
thaliana]
Length = 941
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + ++++CPICL + + + C H FC CI KSM++ + CP C+ RR +R
Sbjct: 7 LERMGRELKCPICLSLYN-SAVSLSCNHVFCNACIVKSMKM-DATCPVCKIP-YHRREIR 63
Query: 82 DDPNYDALISALYPDID 98
P+ D+L+S +Y +++
Sbjct: 64 GAPHMDSLVS-IYKNME 79
>gi|357133046|ref|XP_003568139.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
[Brachypodium distachyon]
Length = 993
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ ++++CPICL +++ +V C H FC +C+ +SM+ ++ CP C+ RR +R
Sbjct: 7 LEKMGRELKCPICLSLLRSAVSVT-CNHIFCNDCLTESMKSASS-CPVCKVP-FRRREIR 63
Query: 82 DDPNYDALISAL 93
P+ D L+S L
Sbjct: 64 PAPHMDNLVSIL 75
>gi|242086134|ref|XP_002443492.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
gi|241944185|gb|EES17330.1| hypothetical protein SORBIDRAFT_08g020500 [Sorghum bicolor]
Length = 489
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTH--CASRRSLRDDPN 85
+ CP+C +++K T+ ECLH FCR+CI K + + + CP C C LR D N
Sbjct: 86 LTCPLCDRLLRKATTISECLHTFCRKCIYKKLNDEDLDHCPVCNIDLGCTPVDKLRADHN 145
Query: 86 YDALISALYP 95
+ S ++P
Sbjct: 146 IQDVRSKVFP 155
>gi|326508722|dbj|BAJ95883.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRT 72
V V+ ++ + + C +C ++++ T+ ECLH FCR+CI K + N+E CP C+
Sbjct: 73 VVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKL---NDEELDHCPVCKI 129
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
CA LR D N + S ++P
Sbjct: 130 DLGCAPVEKLRADHNKQDVRSKIFP 154
>gi|147772496|emb|CAN60778.1| hypothetical protein VITISV_032146 [Vitis vinifera]
Length = 391
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPN 85
+ C IC + T+ ECLH FCR+CI DK + CP C T+ CA LR D N
Sbjct: 17 MTCRICNKLFDDATTISECLHTFCRKCIFDKITEDELDYCPVCNTNLGCAPLEKLRPDHN 76
Query: 86 YDALISALYP 95
L + ++P
Sbjct: 77 LQDLTAKIFP 86
>gi|326520948|dbj|BAJ92837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRT 72
V V+ ++ + + C +C ++++ T+ ECLH FCR+CI K + N+E CP C+
Sbjct: 73 VVMVKREQLARCMTCKLCHRLLREATTISECLHTFCRKCIYKKL---NDEELDHCPVCKI 129
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
CA LR D N + S ++P
Sbjct: 130 DLGCAPVEKLRADHNKQDVRSKIFP 154
>gi|1699382|gb|AAB37501.1| Brca1 [Rattus norvegicus]
gi|1773281|gb|AAB40387.1| Brca1 gene product [Rattus norvegicus]
Length = 215
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 8 LHAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNE-ITKRS 65
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L+ + L+ L ID +E
Sbjct: 66 LQGSARFSQLVEELLKIIDAFE 87
>gi|417410052|gb|JAA51507.1| Putative polycomb group ring finger protein 2, partial [Desmodus
rotundus]
Length = 359
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 10 FSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPA 69
F R +++ E+ + C +C G T++ECLH FC+ CI + + N CP
Sbjct: 11 FPSIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPM 69
Query: 70 CRTHCASRR---SLRDDPNYDALISALYPDIDKYE 101
C R S+R D ++ L P + K E
Sbjct: 70 CDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDE 104
>gi|405961802|gb|EKC27547.1| ADP-ribosylation factor [Crassostrea gigas]
Length = 1098
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
+ ++E+ EI ++CPIC + + EC H FC CI + + N+CPAC H A
Sbjct: 172 WSYLEMKEIDSLLRCPICYDFMHTAMILPECSHTFCSFCIRQHLS-HTNQCPAC-NHGAC 229
Query: 77 RRSLRDDPNYDALI 90
+LR++ D LI
Sbjct: 230 ENNLRNNRLVDDLI 243
>gi|383857691|ref|XP_003704337.1| PREDICTED: uncharacterized protein LOC100877658 [Megachile
rotundata]
Length = 1539
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC--ASRRSLR 81
E+ + CP+C G + TV+ECLH FCR CI K + CP+C+ H ++ +++
Sbjct: 12 EVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNT-EAHCPSCK-HVLNKAKPNIK 69
Query: 82 DDPNYDALISALYPDIDKYEEEELAFHEEERTR 114
D ++ L P + +H+E R R
Sbjct: 70 ADKALQDIVYKLVPGL---------YHKEMRKR 93
>gi|350426618|ref|XP_003494492.1| PREDICTED: hypothetical protein LOC100746715 [Bombus impatiens]
Length = 1821
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 17/88 (19%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACRTHC--ASRRSLRDDPNY 86
CP+C+G + TV+ECLH FCR CI K + N E CP+C+ H ++ +++ D
Sbjct: 19 CPLCIGYLIDATTVVECLHSFCRSCILKHL---NREAYCPSCK-HVLNKAKPNIKADKAL 74
Query: 87 DALISALYPDIDKYEEEELAFHEEERTR 114
++ L P + +H+E R R
Sbjct: 75 QDIVYKLVPGL---------YHKEMRRR 93
>gi|165972361|ref|NP_001107055.1| uncharacterized protein LOC557841 [Danio rerio]
gi|159155816|gb|AAI54623.1| Zgc:172266 protein [Danio rerio]
Length = 447
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG-NNECPACRTHCASRRSLRDDPN 85
K++ CPIC I K + ++ C H FC+ECI + R + ECP CR RRS +DDP
Sbjct: 7 KEISCPICCEIFK-SPILLSCSHSFCKECIQQFWRTKISRECPVCR-----RRSSKDDPP 60
Query: 86 YDALISAL 93
+ ++ L
Sbjct: 61 SNLVLKNL 68
>gi|148682085|gb|EDL14032.1| mCG1030969 [Mus musculus]
Length = 257
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR--THCAS 76
+ L ++ + C IC G + T+ ECLH FC+ CI K +N CP C H A
Sbjct: 136 LIPLSQMIPYISCFICKGYLIDAATITECLHTFCKSCIVKHFE-HSNRCPKCNIIVHQAK 194
Query: 77 -RRSLRDDPNYDALISALYPDIDKYEEEE 104
++LR DP +++ L +++ E+++
Sbjct: 195 PHKNLRMDPQLQSIVYKLVAGLEENEKKQ 223
>gi|403279413|ref|XP_003931245.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 66
P G R +++ E+ + C +C G T++ECLH FC+ CI + + N
Sbjct: 21 PTPDPGIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKY 79
Query: 67 CPACRTHCASRR---SLRDDPNYDALISALYPDIDKYE 101
CP C R S+R D ++ L P + K E
Sbjct: 80 CPMCDVQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDE 117
>gi|301789367|ref|XP_002930103.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Ailuropoda melanoleuca]
Length = 763
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + R G ++CP C+ + ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKNNI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|168036151|ref|XP_001770571.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678092|gb|EDQ64554.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCAS--RRSLRDDPN 85
+ CP+C +I++ T+ ECLH FC+ CI + G +E CP C + LR D
Sbjct: 25 LTCPLCNYLIREATTISECLHTFCKACITAELSNGESECCPMCHVGLGTLPLEKLRADHQ 84
Query: 86 YDALISALYPDIDKYEEEELAF 107
+ L L+P K + LA
Sbjct: 85 LNDLKEKLFPSNVKKRKLGLAI 106
>gi|444729340|gb|ELW69763.1| Polycomb group RING finger protein 3 [Tupaia chinensis]
Length = 345
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|6978573|ref|NP_036646.1| breast cancer type 1 susceptibility protein homolog [Rattus
norvegicus]
gi|41688427|sp|O54952.1|BRCA1_RAT RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|2695691|gb|AAC36493.1| BRCA1 [Rattus norvegicus]
Length = 1817
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPVST-QCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L+ + L+ L ID +E
Sbjct: 73 LQGSARFSQLVEELLKIIDAFE 94
>gi|317419423|emb|CBN81460.1| Breast cancer type 1 susceptibility protein homolog [Dicentrarchus
labrax]
Length = 1418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN------ECPACRTHCASRRSLRD 82
+QCPICL ++ + +C H+FC+ C+ M+L +N CP C+ ++RSL++
Sbjct: 20 LQCPICLDLMTAPVST-KCDHQFCKFCM---MKLLDNTKQNRANCPVCKAKI-TKRSLQE 74
Query: 83 DPNYDALISALYPDIDKYEEE 103
P + L++ L I YE +
Sbjct: 75 SPGFQRLVAGLQDMIQAYEHD 95
>gi|224082740|ref|XP_002306821.1| predicted protein [Populus trichocarpa]
gi|222856270|gb|EEE93817.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR-LGNNECPACRTH- 73
R V V I + CP+C +++ T+ ECLH FCR+CI + + G + CP C +
Sbjct: 9 RVVKVRRETIEACMTCPLCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNINL 68
Query: 74 -CASRRSLRDDPNYDALISALYP 95
C LR D N + S ++P
Sbjct: 69 GCIPLEKLRPDHNLQDVRSKIFP 91
>gi|344249173|gb|EGW05277.1| Polycomb group RING finger protein 2 [Cricetulus griseus]
Length = 398
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G R +++ E+ + C +C G T++ECLH FC+ CI + + N CP C
Sbjct: 28 GIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCD 86
Query: 72 THCASRR---SLRDDPNYDALISALYPDIDK 99
R S+R D ++ L P + K
Sbjct: 87 VQVHKTRPLLSIRSDKTLQDIVYKLVPGLFK 117
>gi|431897351|gb|ELK06613.1| Polycomb group RING finger protein 3 [Pteropus alecto]
Length = 226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|428671775|gb|EKX72690.1| hypothetical protein BEWA_012490 [Babesia equi]
Length = 458
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G RFV L +I + C +C G+ TV EC+H FC+ C+ S CP C
Sbjct: 175 GLDIRFVLGILTDI---LSCRLCKGLFYNAHTVRECMHTFCKSCLILSTIECGLMCPTCF 231
Query: 72 THCAS--RRSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQ 129
T + + D N L+ ++P ++ E E+ +E + +A F RQ
Sbjct: 232 TPIPADILEGIEYDHNIQGLVDKIFPKFNEIESEQKKILDEIMGVSSTESTPMAS-FPRQ 290
Query: 130 S 130
S
Sbjct: 291 S 291
>gi|395328658|gb|EJF61049.1| hypothetical protein DICSQDRAFT_61475 [Dichomitus squalens LYAD-421
SS1]
Length = 705
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 30 QCPICLGIIKKTRTV--MECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
+C ICL + M C H F R+C+DK +++G N CPACRT S+ S+R
Sbjct: 647 RCLICLDDYSPEEDLRLMTCKHVFHRDCVDKWLQVGRNNCPACRTKVRSQSSIR 700
>gi|21425584|emb|CAD33944.1| BMI1-like protein [Mus musculus]
gi|187955404|gb|AAI47683.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
gi|187956799|gb|AAI47696.1| Predicted gene, ENSMUSG00000043661 [Mus musculus]
Length = 194
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR--THCAS 76
+ L ++ + C IC G + T+ ECLH FC+ CI K +N CP C H A
Sbjct: 73 LIPLSQMIPYISCFICKGYLIDAATITECLHSFCKSCIVKHFE-HSNRCPKCNLIVHQAK 131
Query: 77 -RRSLRDDPNYDALISALYPDIDKYEEEE 104
++LR DP +++ L +++ E+++
Sbjct: 132 PHKNLRMDPQLQSIVYKLVAGLEENEKKQ 160
>gi|307173961|gb|EFN64691.1| Polycomb complex protein BMI-1 [Camponotus floridanus]
Length = 1468
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V L ++ + + C +C G T++ECLH FCR CI K + N CP C R
Sbjct: 10 VRLAKLNEQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSRP 68
Query: 80 L---RDDPNYDALISALYP 95
L R D ++ L P
Sbjct: 69 LLNIRPDHTLQDIVYKLVP 87
>gi|346468437|gb|AEO34063.1| hypothetical protein [Amblyomma maculatum]
Length = 552
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+L E+ + + C +C G T++ECLH FC+ CI K + + + CP C R L
Sbjct: 8 KLIELNEHLTCVLCGGYFVDATTIIECLHSFCKTCIVKYLEV-HKMCPVCDVQVHKTRPL 66
Query: 81 ---RDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIA 123
R D ++ L P ++ E R +Q AS+A
Sbjct: 67 QNIRSDQTLQDIVYKLVP----------GLYKNEMRRRRQYYASLA 102
>gi|149054320|gb|EDM06137.1| rCG34321, isoform CRA_a [Rattus norvegicus]
Length = 1817
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L+ + L+ L ID +E
Sbjct: 73 LQGSARFSQLVEELLKIIDAFE 94
>gi|405973239|gb|EKC37963.1| Sedoheptulokinase [Crassostrea gigas]
Length = 1470
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
K C IC G IKK +T+ +C H FC ECI+K R +CP C T
Sbjct: 897 KTTFCKICHGKIKKAKTLNKCNHTFCTECIEKQFRKFGPKCPQCGT 942
>gi|444713977|gb|ELW54865.1| Polycomb group RING finger protein 2 [Tupaia chinensis]
Length = 318
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G R +++ E+ + C +C G T++ECLH FC+ CI + + N CP C
Sbjct: 16 GTMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCD 74
Query: 72 THCASRR---SLRDDPNYDALISALYPDIDKYE 101
R S+R D ++ L P + K E
Sbjct: 75 VQVHKTRPLLSIRSDKTLQDIVYKLVPGLFKDE 107
>gi|348529700|ref|XP_003452351.1| PREDICTED: polycomb group RING finger protein 6-like [Oreochromis
niloticus]
Length = 256
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 8/129 (6%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL---RDDPN 85
++C +C G + T+ ECLH FC+ CI K +N+CP C + L R D
Sbjct: 37 IRCALCCGFLIDATTITECLHTFCKSCIVKHF-FYSNKCPTCSIIVHQTQPLYNIRPDRQ 95
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTAS 145
++ + P +++ E E++ +ER + I A++KR+ S
Sbjct: 96 LQDIVYKMVPFLEELEREQMCNFYKERG----LDVPKPVIVSPPCPAVIKRQKKDNVPQS 151
Query: 146 PFMTRPQRN 154
F P+ +
Sbjct: 152 VFTVPPELD 160
>gi|38086587|ref|XP_142049.3| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
gi|83002894|ref|XP_913741.1| PREDICTED: polycomb group RING finger protein 6-like [Mus musculus]
Length = 230
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR--THCAS 76
+ L ++ + C IC G + T+ ECLH FC+ CI K +N CP C H A
Sbjct: 109 LIPLSQMIPYISCFICKGYLIDAATITECLHTFCKSCIVKHFE-HSNRCPKCNIIVHQAK 167
Query: 77 -RRSLRDDPNYDALISALYPDIDKYE 101
++LR DP +++ L +++ E
Sbjct: 168 PHKNLRMDPQLQSIVYKLVAGLEENE 193
>gi|327266650|ref|XP_003218117.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 697
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+++ CPICLG KK ++ C H FC+ C+D+ CP CR
Sbjct: 12 EELACPICLGYFKKPVMIISCGHNFCQSCLDQCWEGKEASCPQCR 56
>gi|149054321|gb|EDM06138.1| rCG34321, isoform CRA_b [Rattus norvegicus]
Length = 1550
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L+ + L+ L ID +E
Sbjct: 73 LQGSARFSQLVEELLKIIDAFE 94
>gi|344279068|ref|XP_003411313.1| PREDICTED: polycomb group RING finger protein 3-like [Loxodonta
africana]
Length = 242
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|428183799|gb|EKX52656.1| hypothetical protein GUITHDRAFT_57781, partial [Guillardia theta
CCMP2712]
Length = 67
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 30 QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
QCP+C+ ++ V+ C HRFC C+ + G + CP CR C L DD
Sbjct: 3 QCPVCMHVLNNP-LVLSCGHRFCNSCVSAAAYFGQHSCPVCRKECV----LNDD 51
>gi|412993404|emb|CCO16937.1| predicted protein [Bathycoccus prasinos]
Length = 139
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG-NNECPACRTHCASRRSLRDD 83
+R + C +C I+++ TV ECLH FC +CI M +G +N CPAC + S SL +
Sbjct: 26 LRASLTCEMCKNILREANTVTECLHSFCFQCISSKMIVGQSNYCPACGS---SDSSLGVN 82
Query: 84 PNYDALI 90
P D I
Sbjct: 83 PFLDKKI 89
>gi|119580931|gb|EAW60527.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
gi|119580934|gb|EAW60530.1| polycomb group ring finger 2, isoform CRA_a [Homo sapiens]
Length = 257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|417408991|gb|JAA51023.1| Putative polycomb group ring finger protein 3, partial [Desmodus
rotundus]
Length = 246
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 10 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 60
>gi|226532512|ref|NP_001151476.1| LOC100285109 [Zea mays]
gi|195647044|gb|ACG42990.1| protein binding protein [Zea mays]
Length = 464
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 20/222 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH--CASRRSLRDDPN 85
+ CP+C G++++ + CLH FCR+CI + + + + CP C C LR D N
Sbjct: 19 MTCPLCRGLLREATAIALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLRPDHN 78
Query: 86 YDALISALYPDIDKYEEEE------LAFHEEERTRNKQIQASIAKIFQRQS----EALVK 135
+ + ++P I K + L ++R+ + + + + +R K
Sbjct: 79 LQDIRNKVFP-IKKINADSPKSLTTLPAKRKQRSLSSLVVDTPRSVVKRTGLTGKRTKAK 137
Query: 136 RRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQ----GSEDNEDENDD--NGGKDS 189
R+T ASP + P R ++ + Q S N+ EN D K S
Sbjct: 138 RKTVASSAASPINNGTMQLPTKFENRDQKTDKSCASQSTNVASAANKTENQDLKKTRKTS 197
Query: 190 SSNDERSAEVRPRRRKRRSGIRSSQPSSSAANSDGGCIENDL 231
+ R+A R+++ SS+PSS N+ +++L
Sbjct: 198 AKQSTRAATSANRKQQNTDVDVSSKPSSENRNNGTTADKDEL 239
>gi|212274729|ref|NP_001130541.1| uncharacterized protein LOC100191640 [Zea mays]
gi|194689428|gb|ACF78798.1| unknown [Zea mays]
gi|223949863|gb|ACN29015.1| unknown [Zea mays]
gi|414868842|tpg|DAA47399.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 476
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTH--CASRRSLRDDPN 85
+ CP+C +++K T+ ECLH FCR CI + + + CP C+ C LR D N
Sbjct: 80 LTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVCKIDLGCTPVDKLRADHN 139
Query: 86 YDALISALYPDIDK---YEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRT 138
+ S ++P K EE E + + + I + + + A RRT
Sbjct: 140 IQDVRSKVFPFKRKKVNAEEAESPIMLPVKVKERSISSLVVNTPRVTPAASTGRRT 195
>gi|392355796|ref|XP_003752135.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 209
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR--THCAS 76
FV L ++ + C IC G + + ECLH FC+ CI K +N CP C H A
Sbjct: 88 FVPLSQLAPFISCSICKGYLIDATAITECLHTFCKSCIVKHFE-HSNRCPKCNIIVHDAK 146
Query: 77 -RRSLRDDPNYDALISALYPDIDKYE-EEELAFHEEER 112
+LR DP ++ L +++ E ++ F++E R
Sbjct: 147 PHNNLRMDPQLQNIVYKLVEGLEEKETKQRREFYKENR 184
>gi|66364871|gb|AAH95926.1| LOC733241 protein [Xenopus laevis]
Length = 344
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
E PE ++ QCPICLG I+ +T+ +C H FC +CI +++++ CP C
Sbjct: 151 EDPEDDRENQCPICLGEIQNIKTLEKCQHSFCEDCITRALQV-KKACPMC 199
>gi|328777335|ref|XP_393893.4| PREDICTED: hypothetical protein LOC410413 [Apis mellifera]
Length = 1024
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC--ASRRS 79
L E+ + CP+C G + TV+ECLH FCR CI K + CP+C+ H ++ +
Sbjct: 10 LREVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNT-EAHCPSCK-HVLNKAKPN 67
Query: 80 LRDDPNYDALISALYPDIDKYEEEELAFHEEERTR 114
++ D ++ L P + +H+E R R
Sbjct: 68 IKADKALQDIVYKLVPGL---------YHKEMRKR 93
>gi|307189311|gb|EFN73742.1| Polycomb complex protein BMI-1-B [Camponotus floridanus]
Length = 371
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ + + CP+C G + T++ECLH FCR CI + + G CP C A+ L D
Sbjct: 143 DLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVCNV--AASPPLLPD 200
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ P + + E E
Sbjct: 201 TRLQRLVYLAVPGLFRSELE 220
>gi|432091208|gb|ELK24417.1| Polycomb group RING finger protein 3 [Myotis davidii]
Length = 298
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 62 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 112
>gi|332019598|gb|EGI60076.1| Polycomb group RING finger protein 2 [Acromyrmex echinatior]
Length = 847
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
++ + + CP+C G + T++ECLH FCR CI + + G CP C A+ L D
Sbjct: 13 DLNEHIVCPLCRGYLIDATTLVECLHSFCRGCIVRRLSSGARACPVC--SVATSPPLLPD 70
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ P + + E E
Sbjct: 71 MRLQRLVYLAVPGLFRSELE 90
>gi|410917430|ref|XP_003972189.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2-like [Takifugu rubripes]
Length = 362
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC---AS 76
+++ ++ ++ CP+C G + T++ECLH FC+ CI + N CP C
Sbjct: 30 IKITDLNPNLTCPLCAGYLIDATTIVECLHSFCKTCIVAFLE-TNKFCPRCDVQVHKTCP 88
Query: 77 RRSLRDDPNYDALISALYPDIDKYE 101
+ S+R D ++ L P + K E
Sbjct: 89 QLSIRADKTLQDIVYKLVPGLFKDE 113
>gi|350587274|ref|XP_003356878.2| PREDICTED: polycomb group RING finger protein 3-like [Sus scrofa]
Length = 202
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|380012175|ref|XP_003690162.1| PREDICTED: uncharacterized protein LOC100863555 [Apis florea]
Length = 1019
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 13/95 (13%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC--ASRRS 79
L E+ + CP+C G + TV+ECLH FCR CI K + CP+C+ H ++ +
Sbjct: 10 LREVNPYLICPLCRGYLIDATTVVECLHSFCRSCILKHLNT-EAHCPSCK-HVLNKAKPN 67
Query: 80 LRDDPNYDALISALYPDIDKYEEEELAFHEEERTR 114
++ D ++ L P + +H+E R R
Sbjct: 68 IKADKALQDIVYKLVPGL---------YHKEMRKR 93
>gi|194209404|ref|XP_001488220.2| PREDICTED: polycomb group RING finger protein 3-like [Equus
caballus]
Length = 242
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|26329299|dbj|BAC28388.1| unnamed protein product [Mus musculus]
gi|148688162|gb|EDL20109.1| polycomb group ring finger 3, isoform CRA_a [Mus musculus]
Length = 178
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|31742478|ref|NP_006306.2| polycomb group RING finger protein 3 [Homo sapiens]
gi|384475911|ref|NP_001245100.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|332263104|ref|XP_003280595.1| PREDICTED: polycomb group RING finger protein 3 isoform 1
[Nomascus leucogenys]
gi|397480144|ref|XP_003811352.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Pan
paniscus]
gi|402852538|ref|XP_003890977.1| PREDICTED: polycomb group RING finger protein 3 isoform 1 [Papio
anubis]
gi|402852540|ref|XP_003890978.1| PREDICTED: polycomb group RING finger protein 3 isoform 2 [Papio
anubis]
gi|426343538|ref|XP_004038353.1| PREDICTED: polycomb group RING finger protein 3 isoform 1
[Gorilla gorilla gorilla]
gi|121942537|sp|Q3KNV8.1|PCGF3_HUMAN RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|76825323|gb|AAI07062.1| Polycomb group ring finger 3 [Homo sapiens]
gi|119603058|gb|EAW82652.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603059|gb|EAW82653.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|119603062|gb|EAW82656.1| polycomb group ring finger 3, isoform CRA_a [Homo sapiens]
gi|343960921|dbj|BAK62050.1| RING finger protein 3 [Pan troglodytes]
gi|355557419|gb|EHH14199.1| RING finger protein 3A [Macaca mulatta]
gi|355744818|gb|EHH49443.1| RING finger protein 3A [Macaca fascicularis]
gi|380784337|gb|AFE64044.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|383413781|gb|AFH30104.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|384940124|gb|AFI33667.1| polycomb group RING finger protein 3 [Macaca mulatta]
gi|410218840|gb|JAA06639.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410250096|gb|JAA13015.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410300194|gb|JAA28697.1| polycomb group ring finger 3 [Pan troglodytes]
gi|410339339|gb|JAA38616.1| polycomb group ring finger 3 [Pan troglodytes]
Length = 242
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|291415352|ref|XP_002723916.1| PREDICTED: ring finger protein 3 [Oryctolagus cuniculus]
Length = 242
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|118367192|ref|XP_001016811.1| DNA-binding protein Mel-18, RING finger protein [Tetrahymena
thermophila]
gi|89298578|gb|EAR96566.1| DNA-binding protein Mel-18, RING finger protein [Tetrahymena
thermophila SB210]
Length = 447
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-----ECPACR----THCASRRSLR 81
C IC G + T+ EC H FC+ CI + N +CP+C+ H + +S+R
Sbjct: 35 CGICDGYFRFAHTITECGHTFCKICIHDYISKNQNTKNKRKCPSCKGELEIHLS--KSIR 92
Query: 82 DDPNYDALISALYPDIDKYEE 102
DP ++ LYP K E+
Sbjct: 93 KDPYKQQMVDFLYPQFAKQEQ 113
>gi|395749268|ref|XP_003778916.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Pongo abelii]
Length = 385
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|53370662|gb|AAU89157.1| Zinc finger, C3HC4 type (RING finger) containing protein [Oryza
sativa Japonica Group]
Length = 537
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRTH 73
V V+ + + + CP+C +++ TV ECLH FCR+CI + + N+E CP C+
Sbjct: 97 VMVKRELLARCMTCPLCGRLLRDATTVSECLHTFCRKCIYEKL---NDEEVESCPVCKID 153
Query: 74 --CASRRSLRDDPNYDALISALYP 95
C LR D N + S ++P
Sbjct: 154 LGCTPVEKLRADHNLQDVRSKIFP 177
>gi|327275580|ref|XP_003222551.1| PREDICTED: polycomb group RING finger protein 2-like [Anolis
carolinensis]
Length = 337
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|149028673|gb|EDL84014.1| ring finger protein 3 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 203
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|157818223|ref|NP_001100405.1| uncharacterized protein LOC302366 [Rattus norvegicus]
gi|149055522|gb|EDM07106.1| rCG38166 [Rattus norvegicus]
Length = 232
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT---HCA 75
+ L E+ + C IC G + T+ ECLH FC+ CI K +N CP C
Sbjct: 111 LLPLSEMIPYISCSICKGYLIDAATITECLHTFCKSCIVKHFEH-SNRCPKCNIIVHEAK 169
Query: 76 SRRSLRDDPNYDALISALYPDIDKYEEEE-LAFHEEERTRNKQIQA 120
+LR DP ++ L +++ E+++ F++E R + + A
Sbjct: 170 PHNNLRMDPQLQNIVYKLVSGLEEKEKKQRREFYKENRGQTPKPAA 215
>gi|414868841|tpg|DAA47398.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 450
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTH--CASRRSLRDDPN 85
+ CP+C +++K T+ ECLH FCR CI + + + CP C+ C LR D N
Sbjct: 80 LTCPLCDRLLRKATTISECLHTFCRNCIYNKINDEDLDHCPVCKIDLGCTPVDKLRADHN 139
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALV---KRRTPGKD 142
+ S ++P ++ +++ E E I + K+ +R +LV R TP
Sbjct: 140 IQDVRSKVFP----FKRKKVNAEEAE----SPIMLPV-KVKERSISSLVVNTPRVTPAAS 190
Query: 143 TA--SPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVR 200
T + +TR + A LR + DN ++ DN SS D S +
Sbjct: 191 TGRRTRVVTR-----KAAALRGLGPIIVDPLKKDNDNSNKQTDN----SSLLDSLSKIPQ 241
Query: 201 PRRRKRRSGIRSSQPS 216
RR+ +G SS PS
Sbjct: 242 TRRQLLSNGDTSSHPS 257
>gi|392566469|gb|EIW59645.1| hypothetical protein TRAVEDRAFT_71634 [Trametes versicolor FP-101664
SS1]
Length = 1103
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 31 CPICLGIIKKTRTV--MECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
C ICL + V M C H F +EC+DK M++G N CPACRT S
Sbjct: 1049 CLICLDDYQPEDDVRLMHCRHAFHQECVDKWMQVGRNNCPACRTKGVS 1096
>gi|31044444|ref|NP_766304.2| polycomb group RING finger protein 3 [Mus musculus]
gi|325974486|ref|NP_001100715.2| polycomb group RING finger protein 3 [Rattus norvegicus]
gi|81897475|sp|Q8BTQ0.1|PCGF3_MOUSE RecName: Full=Polycomb group RING finger protein 3; AltName:
Full=RING finger protein 3A
gi|26354234|dbj|BAC40745.1| unnamed protein product [Mus musculus]
gi|29165843|gb|AAH49266.1| Pcgf3 protein [Mus musculus]
gi|187469279|gb|AAI67000.1| Pcgf3 protein [Rattus norvegicus]
Length = 241
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|2440074|emb|CAA04477.1| ring finger protein [Homo sapiens]
Length = 247
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 11 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 61
>gi|413933115|gb|AFW67666.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 457
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 20/208 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH--CASRRSLRDDPN 85
+ CP+C G++++ V CLH FCR+CI + + + + CP C C LR D N
Sbjct: 19 MTCPLCRGLLREATAVALCLHTFCRDCIVEKINDDDADCCPVCNIDLGCDPEEKLRPDHN 78
Query: 86 YDALISALYPDIDKYEEEE------LAFHEEERTRNKQIQASIAKIFQRQS----EALVK 135
+ + ++P I K + L ++R+ + + + + +R K
Sbjct: 79 LQDIRNKVFP-IKKINADSPKSLTTLPAKRKQRSLSSLVVDTPRSVVKRTGLTGKRTKAK 137
Query: 136 RRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQ----GSEDNEDENDD--NGGKDS 189
R+T ASP + P R ++ + Q S N+ EN D K S
Sbjct: 138 RKTVASSAASPINNGTMQLPTKFENRDQKTDKSCASQSTNVASAANKTENQDLKKTRKTS 197
Query: 190 SSNDERSAEVRPRRRKRRSGIRSSQPSS 217
+ R+A R+++ SS+PSS
Sbjct: 198 AKQSTRAATSANRKQQNTDVDVSSKPSS 225
>gi|403286806|ref|XP_003934663.1| PREDICTED: polycomb group RING finger protein 3 [Saimiri
boliviensis boliviensis]
Length = 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 39 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 89
>gi|348558585|ref|XP_003465098.1| PREDICTED: polycomb group RING finger protein 3-like [Cavia
porcellus]
Length = 241
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|345798510|ref|XP_855151.2| PREDICTED: polycomb group RING finger protein 3 [Canis lupus
familiaris]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|354480425|ref|XP_003502408.1| PREDICTED: polycomb group RING finger protein 3-like [Cricetulus
griseus]
gi|344251876|gb|EGW07980.1| Polycomb group RING finger protein 3 [Cricetulus griseus]
gi|351704099|gb|EHB07018.1| Polycomb group RING finger protein 3 [Heterocephalus glaber]
Length = 241
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|114052975|ref|NP_001040032.1| polycomb group RING finger protein 3 [Bos taurus]
gi|122136146|sp|Q2KJ29.1|PCGF3_BOVIN RecName: Full=Polycomb group RING finger protein 3
gi|86822076|gb|AAI05551.1| Polycomb group ring finger 3 [Bos taurus]
gi|440911090|gb|ELR60815.1| Polycomb group RING finger protein 3 [Bos grunniens mutus]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|395543302|ref|XP_003773558.1| PREDICTED: polycomb group RING finger protein 3 [Sarcophilus
harrisii]
Length = 259
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 23 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 73
>gi|148688165|gb|EDL20112.1| polycomb group ring finger 3, isoform CRA_d [Mus musculus]
Length = 249
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|410958096|ref|XP_003985657.1| PREDICTED: polycomb group RING finger protein 3 [Felis catus]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|403223896|dbj|BAM42026.1| uncharacterized protein TOT_040000402 [Theileria orientalis
strain Shintoku]
Length = 406
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
I K+ +CPICL ++ K T C H FC++CIDK++ + N CP C+ + S
Sbjct: 3 IPKEFECPICLNLLFKPVTT-SCGHNFCKQCIDKTLLVTQN-CPICKLQLTNDYS 55
>gi|301778068|ref|XP_002924449.1| PREDICTED: polycomb group RING finger protein 3-like [Ailuropoda
melanoleuca]
gi|281343092|gb|EFB18676.1| hypothetical protein PANDA_013795 [Ailuropoda melanoleuca]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|125545675|gb|EAY91814.1| hypothetical protein OsI_13455 [Oryza sativa Indica Group]
Length = 439
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPN 85
+ CP+C G++++ + ECLH FC+ECI +K + CP C C LR D N
Sbjct: 20 MTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKLRPDHN 79
Query: 86 YDALISALYP 95
+ + ++P
Sbjct: 80 VQDIRNKVFP 89
>gi|40539033|gb|AAR87290.1| expressed protein [Oryza sativa Japonica Group]
gi|108711005|gb|ABF98800.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|125587873|gb|EAZ28537.1| hypothetical protein OsJ_12518 [Oryza sativa Japonica Group]
Length = 439
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTH--CASRRSLRDDPN 85
+ CP+C G++++ + ECLH FC+ECI +K + CP C C LR D N
Sbjct: 20 MTCPLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKLRPDHN 79
Query: 86 YDALISALYP 95
+ + ++P
Sbjct: 80 VQDIRNKVFP 89
>gi|47223969|emb|CAG06146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 347
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC---AS 76
+++ ++ ++ CP+C G + T++ECLH FC+ CI + N CP C
Sbjct: 6 IQITDLNPNLTCPLCAGYLIDATTIVECLHSFCKTCIVAFLET-NKFCPRCDVQVHKTCP 64
Query: 77 RRSLRDDPNYDALISALYPDIDKYE 101
+ S+R D ++ L P + K E
Sbjct: 65 QLSIRADKTLQDIVYKLVPGLFKDE 89
>gi|126332046|ref|XP_001366269.1| PREDICTED: polycomb group RING finger protein 3-like [Monodelphis
domestica]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|61740517|ref|NP_001013434.1| breast cancer type 1 susceptibility protein homolog [Canis lupus
familiaris]
gi|2501720|sp|Q95153.1|BRCA1_CANFA RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|1620568|gb|AAC48663.1| similar to the human breast and ovarian cancer susceptibility gene
BRCA1 product [Canis lupus familiaris]
Length = 1878
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|168051407|ref|XP_001778146.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670468|gb|EDQ57036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCAS--RRSLRDDPN 85
+ CP+C +I + T+ ECLH FC++CI + G +E CP C + LR D
Sbjct: 25 LTCPLCNYLIWEATTISECLHTFCKDCIAAELTNGESECCPVCHVGLGTLPLEKLRADHQ 84
Query: 86 YDALISALYPDIDKYEEEELAFHEEE 111
+ L L+P K + L E
Sbjct: 85 LNDLKEKLFPSNVKKRKLGLVLGSPE 110
>gi|355568454|gb|EHH24735.1| DNA-binding protein Mel-18 [Macaca mulatta]
Length = 341
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|345330019|ref|XP_001514398.2| PREDICTED: polycomb group RING finger protein 3-like
[Ornithorhynchus anatinus]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|148688164|gb|EDL20111.1| polycomb group ring finger 3, isoform CRA_c [Mus musculus]
Length = 253
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 18 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 68
>gi|449274339|gb|EMC83581.1| Polycomb group RING finger protein 3 [Columba livia]
Length = 250
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 14 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 64
>gi|327266646|ref|XP_003218115.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 476
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+++ CPICLG KK ++ C H FC+ C+D+ CP CR
Sbjct: 12 EELACPICLGYFKKPVMIISCGHNFCQSCLDQCWEGKEASCPQCR 56
>gi|255559945|ref|XP_002520991.1| ring finger protein, putative [Ricinus communis]
gi|223539828|gb|EEF41408.1| ring finger protein, putative [Ricinus communis]
Length = 520
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMR-LGNNECPACRTH--CASRRSLRDDPN 85
+ CP+C ++K T+ ECLH FCR+CI K + G CP C C LR D N
Sbjct: 17 MTCPLCDMLLKDATTISECLHTFCRKCIYKKISDEGVECCPICNIDLGCVPLEKLRPDHN 76
Query: 86 YDALISALYP 95
+ + ++P
Sbjct: 77 LQDVRAKIFP 86
>gi|118104286|ref|XP_424870.2| PREDICTED: polycomb group RING finger protein 3 [Gallus gallus]
Length = 242
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|410981213|ref|XP_003996967.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Felis catus]
Length = 765
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLNIIHAFE 94
>gi|355709612|gb|AES03650.1| polycomb group ring finger 3 [Mustela putorius furo]
Length = 245
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 9 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 59
>gi|390461119|ref|XP_002746106.2| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Callithrix jacchus]
Length = 323
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 87 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 137
>gi|183986701|ref|NP_001116939.1| deltex homolog 3 [Xenopus (Silurana) tropicalis]
gi|170284624|gb|AAI61216.1| dtx3 protein [Xenopus (Silurana) tropicalis]
Length = 353
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
E PE ++ QCPICLG I+ +T+ +C H FC +CI +++++ CP C
Sbjct: 160 EDPEDDRENQCPICLGEIQNIKTLEKCQHSFCEDCITRALQV-KKACPMC 208
>gi|115464839|ref|NP_001056019.1| Os05g0512000 [Oryza sativa Japonica Group]
gi|113579570|dbj|BAF17933.1| Os05g0512000 [Oryza sativa Japonica Group]
gi|222632199|gb|EEE64331.1| hypothetical protein OsJ_19171 [Oryza sativa Japonica Group]
Length = 987
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ ++++CPICL ++ ++ C H FC +C+ +SM+ + CP C+ RR +R
Sbjct: 7 LEKMGRELKCPICLSLLSSAVSI-SCNHVFCNDCLTESMK-STSSCPVCKVP-FRRREMR 63
Query: 82 DDPNYDALISAL 93
P+ D L+S
Sbjct: 64 PAPHMDNLVSIF 75
>gi|410981211|ref|XP_003996966.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Felis catus]
Length = 1873
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLNIIHAFE 94
>gi|15078834|ref|NP_149584.1| 121R [Invertebrate iridescent virus 6]
gi|82046829|sp|O55735.1|121R_IIV6 RecName: Full=Putative RING finger protein 121R
gi|2738419|gb|AAB94446.1| 121R [Invertebrate iridescent virus 6]
Length = 89
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+E+ ++K+V CPICL I K TV+EC H C C+ K N CP CR
Sbjct: 34 IEIENVKKNVLCPICL--IAKVNTVLECTHVLCSNCVKKI-----NVCPICR 78
>gi|149028672|gb|EDL84013.1| ring finger protein 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 159
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|324507449|gb|ADY43157.1| Polycomb group RING finger protein 3 [Ascaris suum]
Length = 250
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC-----RTHCASRRSLRDD 83
+ CPIC G + TV+ECLH FC+ C+ K +N CP C ++H + S D
Sbjct: 33 ITCPICKGYFIEATTVIECLHTFCKSCLLKHFENESNCCPKCSGLIHQSHPSHYVSF--D 90
Query: 84 PNYDALISALYPDIDKYEEE 103
L+ L P + EEE
Sbjct: 91 RTMQELVYKLVPGLQAREEE 110
>gi|108709971|gb|ABF97766.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|222625413|gb|EEE59545.1| hypothetical protein OsJ_11819 [Oryza sativa Japonica Group]
Length = 510
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRTH--CASRRSLRD 82
+ CP+C +++ TV ECLH FCR+CI + + N+E CP C+ C LR
Sbjct: 108 MTCPLCGRLLRDATTVSECLHTFCRKCIYEKL---NDEEVESCPVCKIDLGCTPVEKLRA 164
Query: 83 DPNYDALISALYP 95
D N + S ++P
Sbjct: 165 DHNLQDVRSKIFP 177
>gi|402899970|ref|XP_003912956.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Papio
anubis]
gi|402899972|ref|XP_003912957.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Papio
anubis]
gi|402899974|ref|XP_003912958.1| PREDICTED: polycomb group RING finger protein 2 isoform 3 [Papio
anubis]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|117644306|emb|CAL37647.1| hypothetical protein [synthetic construct]
gi|208967072|dbj|BAG73550.1| polycomb group ring finger 2 [synthetic construct]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|449513766|ref|XP_002187550.2| PREDICTED: polycomb group RING finger protein 3-like [Taeniopygia
guttata]
Length = 242
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|62857441|ref|NP_001016847.1| polycomb group RING finger protein 3 [Xenopus (Silurana)
tropicalis]
gi|123884065|sp|Q07G17.1|PCGF3_XENTR RecName: Full=Polycomb group RING finger protein 3
gi|115530807|emb|CAL49402.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
gi|197246226|gb|AAI68795.1| polycomb group ring finger 3 [Xenopus (Silurana) tropicalis]
Length = 242
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|395734650|ref|XP_003776452.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pongo abelii]
Length = 323
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 87 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 137
>gi|426348519|ref|XP_004041881.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426348521|ref|XP_004041882.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|30584759|gb|AAP36632.1| Homo sapiens zinc finger protein 144 (Mel-18) [synthetic construct]
gi|60652807|gb|AAX29098.1| ring finger protein 110 [synthetic construct]
Length = 345
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|114667779|ref|XP_511440.2| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
troglodytes]
gi|397477039|ref|XP_003809893.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Pan
paniscus]
gi|397477041|ref|XP_003809894.1| PREDICTED: polycomb group RING finger protein 2 isoform 2 [Pan
paniscus]
gi|410051474|ref|XP_003953100.1| PREDICTED: polycomb group RING finger protein 2 [Pan troglodytes]
gi|410210824|gb|JAA02631.1| polycomb group ring finger 2 [Pan troglodytes]
gi|410293958|gb|JAA25579.1| polycomb group ring finger 2 [Pan troglodytes]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|388454613|ref|NP_001252868.1| polycomb group RING finger protein 2 [Macaca mulatta]
gi|387542154|gb|AFJ71704.1| polycomb group RING finger protein 2 [Macaca mulatta]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|344285955|ref|XP_003414725.1| PREDICTED: polycomb group RING finger protein 2 [Loxodonta
africana]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|6005964|ref|NP_009075.1| polycomb group RING finger protein 2 [Homo sapiens]
gi|462585|sp|P35227.1|PCGF2_HUMAN RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=RING
finger protein 110; AltName: Full=Zinc finger protein
144
gi|285933|dbj|BAA03074.1| Mel-18 protein [Homo sapiens]
gi|13436062|gb|AAH04858.1| Polycomb group ring finger 2 [Homo sapiens]
gi|18999362|gb|AAH24255.1| Polycomb group ring finger 2 [Homo sapiens]
gi|119580932|gb|EAW60528.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
gi|119580933|gb|EAW60529.1| polycomb group ring finger 2, isoform CRA_b [Homo sapiens]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|355754087|gb|EHH58052.1| DNA-binding protein Mel-18 [Macaca fascicularis]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|218197089|gb|EEC79516.1| hypothetical protein OsI_20595 [Oryza sativa Indica Group]
Length = 987
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ ++++CPICL ++ ++ C H FC +C+ +SM+ + CP C+ RR +R
Sbjct: 7 LEKMGRELKCPICLSLLSSAVSI-SCNHVFCNDCLTESMK-STSSCPVCKVP-FRRREMR 63
Query: 82 DDPNYDALISAL 93
P+ D L+S
Sbjct: 64 PAPHMDNLVSIF 75
>gi|194390576|dbj|BAG62047.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 88 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 138
>gi|157423392|gb|AAI53806.1| LOC100126653 protein [Xenopus laevis]
Length = 278
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
E PE ++ QCPICLG I+ +T+ +C H FC +CI +++++ CP C
Sbjct: 85 EDPEDDRENQCPICLGEIQNIKTLEKCQHSFCEDCITRALQV-KKACPMC 133
>gi|410981215|ref|XP_003996968.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 3 [Felis catus]
Length = 698
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + R G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQRKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLNIIHAFE 94
>gi|198426367|ref|XP_002131146.1| PREDICTED: similar to ring finger protein isoform 1 [Ciona
intestinalis]
Length = 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT---HCAS 76
+ L + + + C +C G + T+ ECLH FC+ CI + G NECP C H
Sbjct: 22 IRLRNLNEHITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNECPKCEAVIHHSYP 81
Query: 77 RRSLRDDPNYDALISALYPDIDKYE 101
+ L D ++ L P + + E
Sbjct: 82 LQYLAYDRTMQDIVEKLVPKLKQSE 106
>gi|395826556|ref|XP_003786483.1| PREDICTED: polycomb group RING finger protein 2 [Otolemur
garnettii]
Length = 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|326665654|ref|XP_002661098.2| PREDICTED: zinc-binding protein A33-like [Danio rerio]
Length = 434
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL-GNNECPACRTHCASRRSLRDDPN 85
+D+ C +C I K V+ C H FCREC+ + R G EC CR RRS RDDP
Sbjct: 9 EDISCSVCCEIFKDP-VVLSCSHSFCRECLQQFWRTKGTQECVVCR-----RRSSRDDPP 62
Query: 86 YDALISAL 93
+ ++ L
Sbjct: 63 NNLVLRNL 70
>gi|149723900|ref|XP_001501632.1| PREDICTED: polycomb group RING finger protein 2 [Equus caballus]
Length = 344
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|426237855|ref|XP_004012873.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Ovis aries]
Length = 324
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|344299166|ref|XP_003421258.1| PREDICTED: E3 ubiquitin-protein ligase TRIM11-like [Loxodonta
africana]
Length = 600
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACRTHCASRRSLR 81
+++ + CPICL + + + + C H FCR C+D+S +G+ CP CR CA+ RSLR
Sbjct: 9 DLQDEATCPICLDLFSEPVS-LGCGHNFCRACVDRSRGVGDAPFLCPECRKPCAT-RSLR 66
Query: 82 DDPNYDALISAL 93
+ + +AL
Sbjct: 67 PNRPLGRVATAL 78
>gi|126323137|ref|XP_001365790.1| PREDICTED: e3 ubiquitin-protein ligase UHRF1 [Monodelphis
domestica]
Length = 794
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G C F F L ++ + C C ++ + T M C H C++C+D+S R CPACR
Sbjct: 708 GMECFFKF--LNKVEETFLCICCQEVVFRPITTM-CQHNVCKDCLDRSFRAEVYSCPACR 764
Query: 72 THCASRRSLRDDPNYDALISALYP 95
S++ + ++S L+P
Sbjct: 765 YELGKSYSMQVNQTLQTILSQLFP 788
>gi|296486315|tpg|DAA28428.1| TPA: polycomb group RING finger protein 3 [Bos taurus]
Length = 179
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|242037795|ref|XP_002466292.1| hypothetical protein SORBIDRAFT_01g005090 [Sorghum bicolor]
gi|241920146|gb|EER93290.1| hypothetical protein SORBIDRAFT_01g005090 [Sorghum bicolor]
Length = 383
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C + + T+ ECLH FCR+CI S N E CP C H CA LR D
Sbjct: 43 LTCPLCGRLFRDAATITECLHTFCRKCI--SEEFINKEVCCCPICSIHLGCAPLEKLRID 100
Query: 84 PNYDALISALYP 95
+ + S ++P
Sbjct: 101 HSLQYVRSKVFP 112
>gi|348542744|ref|XP_003458844.1| PREDICTED: zinc-binding protein A33-like [Oreochromis niloticus]
Length = 485
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+++D+ CP+C GI + ++ C H FCREC+ K+ N +CP CR C +++
Sbjct: 13 LQQDLTCPVCQGIFRDP-MLLPCTHSFCRECLVKNWEY-NKKCPVCREVCEEDKAI 66
>gi|156551976|ref|XP_001602601.1| PREDICTED: hypothetical protein LOC100118694 [Nasonia
vitripennis]
Length = 761
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ CP+C G + T++ECLH FCR CI + + G CP C
Sbjct: 29 IVCPLCRGYLIDATTLVECLHSFCRGCILRRLHNGPKTCPVC 70
>gi|402593600|gb|EJW87527.1| hypothetical protein WUBG_01563 [Wuchereria bancrofti]
Length = 186
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC-----RTHC 74
+ L + + CP+C G + TV +CLH FC+ C+ K NN CP C ++H
Sbjct: 14 ILLKTLNPHITCPLCKGYFIEATTVTDCLHTFCKSCLLKHFENVNNCCPKCSNLIHQSHP 73
Query: 75 ASRRSLRDDPNYDALISALYPDIDKYEEE 103
+ S D L+ L P + EEE
Sbjct: 74 SHYVSF--DRTMQELVYKLVPGVQIREEE 100
>gi|332818893|ref|XP_003339483.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Pan troglodytes]
Length = 329
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 93 IKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 143
>gi|326523247|dbj|BAJ88664.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 18/176 (10%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH- 73
V V+ + + + CP+C +++ T+ ECLH FCR+CI K + E CP C
Sbjct: 31 VMVKRAALVERLTCPLCRRLLRDAATITECLHTFCRKCISKEFI--DKEICYCPTCNIDL 88
Query: 74 -CASRRSLRDDPNYDALISALYPDIDK--YEEEELAFHEEERTRNKQIQASIAKIFQRQS 130
CA LR D + + S ++P + ++E ++ R ++ +S+ R S
Sbjct: 89 GCAPEEKLRVDHSLQYVRSKIFPSKRRKVVDQEAISPFASPAKRKERSLSSLTVHGPRVS 148
Query: 131 --EALVKRRTPGKDTASPFMTRPQRN-------PRTAHLRRRRNSRGTEHQGSEDN 177
+ L KRRT S + P +H+R +N + + EDN
Sbjct: 149 IQKCLTKRRTKASCLRSLSLGSKDATKKVGGWKPLASHIRVGKNKKSLKSGSEEDN 204
>gi|441660761|ref|XP_004093035.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
2 [Nomascus leucogenys]
Length = 286
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|348562307|ref|XP_003466952.1| PREDICTED: polycomb group RING finger protein 2-like [Cavia
porcellus]
Length = 344
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|71029014|ref|XP_764150.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351104|gb|EAN31867.1| hypothetical protein TP04_0515 [Theileria parva]
Length = 309
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ KD +CPIC I+ K T C H FC+ CID+++ N CP CR +S+ S
Sbjct: 3 VPKDFECPICFNILYKPVTT-SCGHNFCKFCIDQAIHSSPN-CPLCRIPLSSQYS 55
>gi|296202674|ref|XP_002748549.1| PREDICTED: polycomb group RING finger protein 2 [Callithrix
jacchus]
Length = 344
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|403279411|ref|XP_003931244.1| PREDICTED: polycomb group RING finger protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|354474807|ref|XP_003499621.1| PREDICTED: polycomb group RING finger protein 2-like [Cricetulus
griseus]
Length = 342
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|198414702|ref|XP_002129324.1| PREDICTED: similar to Polycomb complex protein BMI-1 (Polycomb
group RING finger protein 4) (RING finger protein 51)
[Ciona intestinalis]
Length = 1188
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
R V + + ++ V C +C G T++ECLH FCR CI + + CP CR
Sbjct: 3 RSVKLRVRDLHPHVTCHLCNGYFIDATTIIECLHSFCRTCIVRYLE-NRRSCPVCRVQVH 61
Query: 76 SRRSL---RDDPNYDALISALYPDI 97
R L R D ++ L P +
Sbjct: 62 KTRPLLNIRSDQTLQDIVYKLVPGL 86
>gi|29647951|gb|AAO92398.1|AF479648_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11 [Bos taurus]
Length = 715
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|29647953|gb|AAO92399.1|AF479649_1 breast and ovarian cancer susceptibility protein variant
BRCA1-delta 11b [Bos taurus]
Length = 752
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|307107127|gb|EFN55371.1| hypothetical protein CHLNCDRAFT_134421 [Chlorella variabilis]
Length = 976
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ +++ C ICL ++ + C H FC CI +S+R +CP C+ RR + D
Sbjct: 8 LARELSCSICLCVMSPPVARLPCCHYFCMGCIQQSVRH-KAQCPVCKCK-VGRRDISSDD 65
Query: 85 NYDALISALYPDIDKYEEE 103
D ++ A + D+D ++EE
Sbjct: 66 TMDRVVLA-FADLDAHKEE 83
>gi|302822410|ref|XP_002992863.1| hypothetical protein SELMODRAFT_448935 [Selaginella
moellendorffii]
gi|300139311|gb|EFJ06054.1| hypothetical protein SELMODRAFT_448935 [Selaginella
moellendorffii]
Length = 554
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTHCAS--RRSLRDDPN 85
+ CP+C + ++ T+ ECLH FC++CI D+ N CP C + LR DP
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHDRFSDEETNSCPMCNVDLGTVPLEKLRADPQ 83
Query: 86 YDALISALY 94
D + + ++
Sbjct: 84 LDDVQAKIF 92
>gi|126308194|ref|XP_001366744.1| PREDICTED: polycomb group RING finger protein 2 [Monodelphis
domestica]
Length = 347
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|158295814|ref|XP_001237808.2| AGAP006403-PA [Anopheles gambiae str. PEST]
gi|157016217|gb|EAU76594.2| AGAP006403-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
V+L + + C +C G + T++ECLH FC CI K +R CP C ++
Sbjct: 88 VKLGSVHPCITCHLCKGYLIDATTIVECLHSFCHSCIMKHLRT-EQYCPQCEMMINKAKP 146
Query: 79 SLRDDPNYDALISALYPDIDKYEEE 103
+++ D A++ L P + YE E
Sbjct: 147 NIKPDATLQAIVYKLVPRL--YENE 169
>gi|221139865|ref|NP_001137520.1| similar to Tripartite motif-containing protein 35 (Hemopoietic
lineage switch protein 5) [Danio rerio]
Length = 452
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 26 RKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 84
+ D CP+C I K T ++ C H FC+EC+ + R N ECP CRT R S+ D P
Sbjct: 6 KDDYTCPVCQDIFK-TPVILSCGHSFCQECLQQCWRSENTQECPVCRT----RSSIADPP 60
Query: 85 NYDAL 89
AL
Sbjct: 61 VNLAL 65
>gi|355709609|gb|AES03649.1| Polycomb group RING finger protein 2 [Mustela putorius furo]
Length = 344
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|328354104|emb|CCA40501.1| DNA repair protein RAD5 [Komagataella pastoris CBS 7435]
Length = 432
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 25 IRKDVQCPICLGIIKKT---RTVMECLHRFCRECIDKSMRLGNNECPACR 71
++ D CPICL K R +++C H+F RECID+ + G N CP CR
Sbjct: 374 VQHDDSCPICLINYKNGDYGRALVDCKHQFHRECIDQWLIQGENVCPLCR 423
>gi|291406195|ref|XP_002719221.1| PREDICTED: breast cancer 1, early onset [Oryctolagus cuniculus]
Length = 761
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 8 LKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNN 65
+ SG V L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G +
Sbjct: 1 MDLSGVRVEEVQNVLNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPS 59
Query: 66 ECPACRTHCASRRSLRDDPNYDALISALYPDIDKYE 101
+CP C+ ++RSL++ + L+ L I +E
Sbjct: 60 QCPLCKNDI-TKRSLQESTRFSQLVEELLKMIQAFE 94
>gi|51011013|ref|NP_001003462.1| uncharacterized protein LOC445068 [Danio rerio]
gi|50418106|gb|AAH77164.1| Zgc:91888 [Danio rerio]
Length = 450
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 84
D+ CP+C I K T ++ C H FC+EC+ + R N ECP CR RRS +D P
Sbjct: 8 DLTCPVCQDIFK-TPVILSCSHSFCKECLQQFWRNKNTQECPVCR-----RRSSKDRP 59
>gi|313232453|emb|CBY24121.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPA--CR--T 72
+V V L I + CPIC G + + ECLH FCR C+ + ++ ECP CR
Sbjct: 34 YVGVSLSPISNLLACPICNGYLVNATAITECLHVFCRSCLIRKLQ-QTQECPLPHCREKV 92
Query: 73 HCASRRSLRDDPNYDALISALYPDIDKYE 101
++ +LR D LI L P + + E
Sbjct: 93 IVSAEGALRYDRTLQDLIHLLVPRVLQVE 121
>gi|260817655|ref|XP_002603701.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
gi|229289023|gb|EEN59712.1| hypothetical protein BRAFLDRAFT_126892 [Branchiostoma floridae]
Length = 628
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+FV V++ +I + C +C G TV ECLH FC+ CI K ++ + CP C
Sbjct: 409 KFVMVKICDINPHIVCILCAGYFIDATTVTECLHTFCKSCIVKYLQ-TSKFCPMC 462
>gi|296476316|tpg|DAA18431.1| TPA: breast cancer type 1 susceptibility protein homolog [Bos
taurus]
Length = 1849
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|30466260|ref|NP_848668.1| breast cancer type 1 susceptibility protein homolog [Bos taurus]
gi|55976506|sp|Q864U1.1|BRCA1_BOVIN RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|29640734|gb|AAL76094.1| breast and ovarian cancer susceptibility protein [Bos taurus]
Length = 1849
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|325179777|emb|CCA14180.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 844
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 14 FCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
F +EL +++K V C +C +K+ + +C H FC++CID +++ N +CP+C+
Sbjct: 774 FSELERLELKDLQKIVNCSVCQDR-RKSVIISKCYHMFCKDCIDSNLKARNRKCPSCK 830
>gi|426238123|ref|XP_004013007.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Ovis aries]
Length = 763
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|254573934|ref|XP_002494076.1| hypothetical protein [Komagataella pastoris GS115]
gi|238033875|emb|CAY71897.1| Hypothetical protein PAS_chr4_0637 [Komagataella pastoris GS115]
Length = 438
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 25 IRKDVQCPICLGIIKKT---RTVMECLHRFCRECIDKSMRLGNNECPACR 71
++ D CPICL K R +++C H+F RECID+ + G N CP CR
Sbjct: 380 VQHDDSCPICLINYKNGDYGRALVDCKHQFHRECIDQWLIQGENVCPLCR 429
>gi|440904221|gb|ELR54760.1| Polycomb group RING finger protein 2 [Bos grunniens mutus]
Length = 353
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|195120011|ref|XP_002004522.1| GI19979 [Drosophila mojavensis]
gi|193909590|gb|EDW08457.1| GI19979 [Drosophila mojavensis]
Length = 1449
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA---SR 77
+L + + C IC G + TV C H +CR CI K + L + CP C++ S
Sbjct: 21 QLSQFNEQFTCHICRGYMIDPTTVDNCYHTYCRSCILKHL-LRDVYCPQCKSSGGKHISE 79
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEELAFHEEE 111
+LR D ALI L P + + E E LA +E+
Sbjct: 80 DNLRSDDTLRALIYKLVPGLYQRECERLAEFKEQ 113
>gi|221136916|ref|NP_001137578.1| polycomb group RING finger protein 2 [Bos taurus]
gi|296476466|tpg|DAA18581.1| TPA: polycomb group ring finger 2 [Bos taurus]
Length = 344
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|312096492|ref|XP_003148686.1| hypothetical protein LOAG_13128 [Loa loa]
gi|307756150|gb|EFO15384.1| hypothetical protein LOAG_13128 [Loa loa]
Length = 244
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC-----RTHC 74
+ L + + CP+C G + TV +CLH FC+ C+ K NN CP C ++H
Sbjct: 14 ILLKTLNPHITCPLCKGYFVEATTVTDCLHTFCKSCLLKHFENVNNCCPKCSNLIHQSHP 73
Query: 75 ASRRSLRDDPNYDALISALYPDIDKYEEE 103
+ S D L+ L P + EEE
Sbjct: 74 SHYVSF--DRTMQELVYKLVPGVQIREEE 100
>gi|198426369|ref|XP_002131159.1| PREDICTED: similar to ring finger protein isoform 2 [Ciona
intestinalis]
Length = 226
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT---HCAS 76
+ L + + + C +C G + T+ ECLH FC+ CI + G NECP C H
Sbjct: 5 IRLRNLNEHITCYLCHGYLIDATTITECLHTFCKSCIVSHVEDGRNECPKCEAVIHHSYP 64
Query: 77 RRSLRDDPNYDALISALYPDIDKYE 101
+ L D ++ L P + + E
Sbjct: 65 LQYLAYDRTMQDIVEKLVPKLKQSE 89
>gi|440893907|gb|ELR46515.1| Breast cancer type 1 susceptibility protein-like protein [Bos
grunniens mutus]
Length = 1838
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|358255849|dbj|GAA57479.1| polycomb group RING finger protein 4 [Clonorchis sinensis]
Length = 112
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR---SLRDDPN 85
+ C +C G + T++ECLH FCR CI ++L + CP C T R ++R D
Sbjct: 16 LTCKLCNGYLIDATTIVECLHSFCRSCILSYLKL-HTTCPICDTLLHKTRPHYAIRPDRA 74
Query: 86 YDALISALYPDIDKYEEE 103
A++ L P++ +E+E
Sbjct: 75 LQAMVYKLIPNL--FEKE 90
>gi|85001059|ref|XP_955248.1| hypothetical protein [Theileria annulata]
gi|65303394|emb|CAI75772.1| hypothetical protein TA05190 [Theileria annulata]
Length = 1375
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 82/213 (38%), Gaps = 49/213 (23%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCREC-------------IDKSMRLGNNE--------- 66
+ C +C G++ T+ +C+H FC+ C ID S++L
Sbjct: 243 LTCYLCKGLLYNAHTIKDCMHTFCKSCLILSTFESFFYSLIDSSIQLYIVIYIVIMVIMM 302
Query: 67 ------CPACRT--HCASRRSLRDDPNYDALISALYPDIDKYE-------EEELAFHEEE 111
CP C T H + + D N ++ L+P+ ++E E ++ ++ E
Sbjct: 303 IVDGLVCPMCFTPIHTSIAEGVESDTNIQTIVDKLFPEFAEHERKQKEEMERQIKLYKTE 362
Query: 112 RTRNKQIQAS------IAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLRRRRN 165
T N I +S + +++ + + ++ R++ D+ + F+ + L
Sbjct: 363 NT-NTSINSSDSGKSEVKELYFEEQKDIIDRKSKLSDSTATFLNELNKCKDINKLFDNVL 421
Query: 166 SRGTEHQGSED-----NEDENDDNGGKDSSSND 193
H+ N+ ND KDSS +D
Sbjct: 422 CLALVHESDNQINSIFNDINNDKEDSKDSSYSD 454
>gi|297848954|ref|XP_002892358.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338200|gb|EFH68617.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCA 75
+ V+ +R CP+C I++ T+ ECLH FCR+CI + + E CP C
Sbjct: 3 MIKVKKETMRACFSCPLCDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLG 62
Query: 76 SR--RSLRDDPNYDALISALYP 95
LR D N L + ++P
Sbjct: 63 GTPLEKLRPDHNLQDLRAKIFP 84
>gi|296201526|ref|XP_002748065.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Callithrix jacchus]
Length = 1857
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|157786680|ref|NP_001099306.1| polycomb group RING finger protein 2 [Rattus norvegicus]
gi|149054053|gb|EDM05870.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054054|gb|EDM05871.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054055|gb|EDM05872.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149054056|gb|EDM05873.1| polycomb group ring finger 2 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|187469317|gb|AAI67059.1| Pcgf2 protein [Rattus norvegicus]
Length = 342
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|156547031|ref|XP_001601096.1| PREDICTED: hypothetical protein LOC100116657 [Nasonia vitripennis]
Length = 1468
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ L + + + C +C G T++ECLH FC+ CI K + N CP C +
Sbjct: 9 LHLSTLNEQLTCKLCGGYFIDATTIIECLHSFCKSCIVKYLE-SNKFCPVCDAQVHKNKP 67
Query: 80 L---RDDPNYDALISALYPDIDKYE----EEELAFHEEER 112
L R D ++ L P + E +E A H EE+
Sbjct: 68 LSNIRPDQTLQDIVYKLVPGCYQNEMRCRKEFYAKHPEEK 107
>gi|146741282|dbj|BAF62296.1| breast cancer type 1 susceptibility protein homolog [Sus scrofa]
Length = 1863
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 13 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 70
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 71 LQESTRFSQLVEELLKIIHAFE 92
>gi|335297605|ref|XP_003358077.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Sus scrofa]
Length = 1865
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|426238121|ref|XP_004013006.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Ovis aries]
Length = 1862
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|22331268|ref|NP_188946.2| putative E3 ubiquitin protein ligase DRIPH [Arabidopsis thaliana]
gi|75311516|sp|Q9LS86.1|DRIPH_ARATH RecName: Full=Probable E3 ubiquitin protein ligase DRIPH;
AltName: Full=DREB2A-interacting protein homolog
gi|9294195|dbj|BAB02097.1| unnamed protein product [Arabidopsis thaliana]
gi|20466758|gb|AAM20696.1| RING zinc finger protein, putative [Arabidopsis thaliana]
gi|30387603|gb|AAP31967.1| At3g23060 [Arabidopsis thaliana]
gi|332643190|gb|AEE76711.1| putative E3 ubiquitin protein ligase DRIPH [Arabidopsis thaliana]
Length = 480
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTHCA--SRRSL 80
E++ + CPIC K T+ ECLH FCR CI +K + N CP C + L
Sbjct: 9 EVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKL 68
Query: 81 RDDPNYDALISALY 94
R D + L +Y
Sbjct: 69 RSDCTWQDLKLKIY 82
>gi|6678635|ref|NP_033571.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028181|ref|NP_001156779.1| polycomb group RING finger protein 2 [Mus musculus]
gi|254028183|ref|NP_001156780.1| polycomb group RING finger protein 2 [Mus musculus]
gi|126937|sp|P23798.2|PCGF2_MOUSE RecName: Full=Polycomb group RING finger protein 2; AltName:
Full=DNA-binding protein Mel-18; AltName: Full=Melanoma
nuclear protein 18; AltName: Full=RING finger protein
110; AltName: Full=Zinc finger protein 144;
Short=Zfp-144
gi|220477|dbj|BAA14122.1| Mel-18 [Mus musculus]
gi|16741134|gb|AAH16419.1| Pcgf2 protein [Mus musculus]
gi|19548758|gb|AAL90776.1| mel-18 protein [Mus musculus]
gi|19548760|gb|AAL90777.1| mel-18 protein [Mus musculus]
gi|148684140|gb|EDL16087.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684141|gb|EDL16088.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684142|gb|EDL16089.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
gi|148684143|gb|EDL16090.1| polycomb group ring finger 2, isoform CRA_a [Mus musculus]
Length = 342
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|410900956|ref|XP_003963962.1| PREDICTED: polycomb group RING finger protein 6-like [Takifugu
rubripes]
Length = 255
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ L + ++C +C G + T+ ECLH FC+ CI K +N CP C +
Sbjct: 28 IPLNQFYPYIRCGLCCGFLIDASTITECLHTFCKSCIVKHF-FYSNRCPTCSIVVHETQP 86
Query: 80 L---RDDPNYDALISALYPDIDKYEEEEL 105
L R D ++ + P ++++E E++
Sbjct: 87 LYNIRPDRQLQDIVYKMVPFLEEFEREQM 115
>gi|296201528|ref|XP_002748066.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Callithrix jacchus]
Length = 1880
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|326500362|dbj|BAK06270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 985
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + ++++CPICL +++ +V C H FC +C+ +SM+ ++ CP C+ RR +R
Sbjct: 7 LERMGRELKCPICLSLLRSAVSVT-CNHIFCSDCLMESMK-SSSSCPVCKVP-FRRREIR 63
Query: 82 DDPNYDALISAL 93
P+ D L+ L
Sbjct: 64 PAPHMDNLVGIL 75
>gi|344251236|gb|EGW07340.1| Tripartite motif-containing protein 6 [Cricetulus griseus]
Length = 488
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECI----DKSM--RLGNNECPACRT 72
L +IR +V CPICL ++ + ++ +C H FC++CI DKS+ + G N CP CRT
Sbjct: 6 LVDIRDEVTCPICLELLTEPLSI-DCGHSFCQDCITGSSDKSVPNQEGKNRCPVCRT 61
>gi|335297607|ref|XP_003358078.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Sus scrofa]
Length = 759
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLKIIHAFE 94
>gi|157128543|ref|XP_001661477.1| ring finger protein [Aedes aegypti]
gi|108872542|gb|EAT36767.1| AAEL011179-PA [Aedes aegypti]
Length = 276
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH---CASR 77
++ + + C +C G + + T+ +CLH FCR CI + + GN CP C+++ +
Sbjct: 39 KVKDFNDSITCSLCNGYLIEATTINDCLHTFCRSCIVRHLE-GNKYCPKCKSYNNKTITV 97
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEELA 106
+LR D +L+ L P + + E + A
Sbjct: 98 ANLRPDRILRSLVYKLVPGLHRSENQRAA 126
>gi|157128545|ref|XP_001661478.1| posterior sex combs protein [Aedes aegypti]
gi|108872543|gb|EAT36768.1| AAEL011178-PA [Aedes aegypti]
Length = 1348
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
V L + + C +C G + T++ECLH FC CI K +R CP C ++
Sbjct: 41 VLLSSVNPYITCNLCKGYLIDATTIVECLHSFCHSCIMKHLR-TEQYCPQCEMMINKAKP 99
Query: 79 SLRDDPNYDALISALYPDIDKYEEEEL---AFH 108
+++ D +++ L P + YE+E L AF+
Sbjct: 100 NIKPDATLQSIVYKLVPGL--YEKELLRKRAFY 130
>gi|302771287|ref|XP_002969062.1| hypothetical protein SELMODRAFT_440578 [Selaginella
moellendorffii]
gi|300163567|gb|EFJ30178.1| hypothetical protein SELMODRAFT_440578 [Selaginella
moellendorffii]
Length = 394
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECI-DKSMRLGNNECPACRTHCAS--RRSLRDDPN 85
+ CP+C + ++ T+ ECLH FC++CI D+ N CP C + LR DP
Sbjct: 24 LTCPLCGNLFREATTISECLHTFCKDCIHDRFSDEETNSCPMCNVDLGTVPLEKLRADPQ 83
Query: 86 YDALISALY 94
D + + ++
Sbjct: 84 LDDVQAKIF 92
>gi|431890708|gb|ELK01587.1| Polycomb group RING finger protein 2 [Pteropus alecto]
Length = 144
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|148227230|ref|NP_001084248.1| breast cancer 1, early onset [Xenopus laevis]
gi|15991720|gb|AAL13037.1|AF416868_1 breast and ovarian cancer susceptibility protein [Xenopus laevis]
Length = 1579
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRRSLR 81
++K+++CPICL ++K+ +C H FC+ C+ + + + G CP C+T +RRSL+
Sbjct: 18 MQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRRSLQ 75
Query: 82 DDPNYDALISALYPDIDKYEEEE--LAFHEEERTRNKQIQASIAKIFQRQSEALV 134
+ + L+ I +E + F +E T K + ++I + ++ +++V
Sbjct: 76 ESHRFKLLVEGQLKIIKAFEFDSGYKFFPSQEHT--KGLDSTIEDVLVKEDQSIV 128
>gi|291405919|ref|XP_002719174.1| PREDICTED: ring finger protein 110 [Oryctolagus cuniculus]
Length = 314
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLE-TNKYCPMCDVQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDIDKYE 101
S+R D ++ L P + K E
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGLFKDE 90
>gi|213626803|gb|AAI70141.1| Breast and ovarian cancer susceptibility protein [Xenopus laevis]
Length = 1579
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRRSLR 81
++K+++CPICL ++K+ +C H FC+ C+ + + + G CP C+T +RRSL+
Sbjct: 18 MQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKGTVPCPLCKTE-VTRRSLQ 75
Query: 82 DDPNYDALISALYPDIDKYEEEE--LAFHEEERTRNKQIQASIAKIFQRQSEALV 134
+ + L+ I +E + F +E T K + ++I + ++ +++V
Sbjct: 76 ESHRFKLLVEGQLKIIKAFEFDSGYKFFPSQEHT--KGLDSTIEDVLVKEDQSIV 128
>gi|348562775|ref|XP_003467184.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cavia porcellus]
Length = 1748
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C++ ++RSL++
Sbjct: 17 MQKVLECPICLELIKEPVST-KCDHIFCKFCMLKFLDQKKGLSQCPLCKSSI-TKRSLQE 74
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I +E
Sbjct: 75 STRFGQLVEELQKTIHAFE 93
>gi|402900432|ref|XP_003913179.1| PREDICTED: LOW QUALITY PROTEIN: breast cancer type 1 susceptibility
protein homolog [Papio anubis]
Length = 1873
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FCR C+ K + + G ++CP C+ ++RSL++
Sbjct: 4 MQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 61
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I ++
Sbjct: 62 STRFSQLVEELLKIIHAFQ 80
>gi|354502459|ref|XP_003513303.1| PREDICTED: tripartite motif-containing protein 6-like [Cricetulus
griseus]
Length = 690
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECI----DKSM--RLGNNECPACRT 72
L +IR +V CPICL ++ + ++ +C H FC++CI DKS+ + G N CP CRT
Sbjct: 208 LVDIRDEVTCPICLELLTEPLSI-DCGHSFCQDCITGSSDKSVPNQEGKNRCPVCRT 263
>gi|395857624|ref|XP_003804043.1| PREDICTED: LOW QUALITY PROTEIN: polycomb group RING finger protein
3 [Otolemur garnettii]
Length = 291
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
V L +I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 55 VRLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 105
>gi|383421039|gb|AFH33733.1| breast cancer type 1 susceptibility protein isoform 1 [Macaca
mulatta]
Length = 1863
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FCR C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I ++
Sbjct: 76 STRFSQLVEELLKIIHAFQ 94
>gi|169234602|ref|NP_001108421.1| breast cancer type 1 susceptibility protein homolog [Macaca
mulatta]
gi|55976415|sp|Q6J6I9.1|BRCA1_MACMU RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479018|gb|AAT44833.1| breast cancer type 1 [Macaca mulatta]
Length = 1863
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FCR C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I ++
Sbjct: 76 STRFSQLVEELLKIIHAFQ 94
>gi|355754208|gb|EHH58173.1| hypothetical protein EGM_07963 [Macaca fascicularis]
Length = 1863
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FCR C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCRFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I ++
Sbjct: 76 STRFSQLVEELLKIIHAFQ 94
>gi|348511775|ref|XP_003443419.1| PREDICTED: polycomb group RING finger protein 3-like [Oreochromis
niloticus]
Length = 241
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 6 IKLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 56
>gi|225437241|ref|XP_002275598.1| PREDICTED: E3 ubiquitin protein ligase DRIP2 [Vitis vinifera]
gi|297735508|emb|CBI17948.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C +++ T+ ECLH FCR+CI ++ + E CP C T C LR D
Sbjct: 17 MTCPLCNKLLRDATTISECLHTFCRKCIYN--KISDEELECCPICNTDLGCVPLEKLRPD 74
Query: 84 PNYDALISALYP 95
N + + ++P
Sbjct: 75 HNLQDVRAKIFP 86
>gi|340369220|ref|XP_003383146.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Amphimedon queenslandica]
Length = 150
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN----ECPACRTHCASRRSL 80
IR+ +QCPICL +K + +CLH+FCRECI + +CP C+ +R L
Sbjct: 27 IRQTLQCPICLEQLKNP-CLTQCLHQFCRECIQTVISTTTAANKPKCPLCKEQ-ICKRGL 84
Query: 81 RDDPNYDALISAL 93
D + +ISA+
Sbjct: 85 TDSSRMEEVISAM 97
>gi|392343333|ref|XP_003754856.1| PREDICTED: polycomb group RING finger protein 6-like [Rattus
norvegicus]
Length = 144
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR--THCAS 76
FV L ++ + C IC G + + ECLH FC+ CI K +N CP C H A
Sbjct: 23 FVPLSQLAPFISCSICKGYLIDATAITECLHTFCKSCIVKHFE-HSNRCPKCNIIVHDAK 81
Query: 77 -RRSLRDDPNYDALISALYPDIDKYEEEE-LAFHEEER 112
+LR DP ++ L +++ E ++ F++E R
Sbjct: 82 PHNNLRMDPQLQNIVYKLVEGLEEKETKQRREFYKENR 119
>gi|448122095|ref|XP_004204364.1| Piso0_000205 [Millerozyma farinosa CBS 7064]
gi|358349903|emb|CCE73182.1| Piso0_000205 [Millerozyma farinosa CBS 7064]
Length = 481
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR--SLRDDPN 85
D CPIC+ I K +EC HRFC C+ K +CP CR CA + SL D
Sbjct: 386 DYSCPICMSIAFKP-IKLECGHRFCVRCLVKLKHQDKTDCPFCRHQCAVAKADSLNLDVK 444
Query: 86 YDALISALYP 95
L+ +P
Sbjct: 445 AMKLMQLYFP 454
>gi|157954462|ref|NP_001103307.1| uncharacterized protein LOC100126109 [Danio rerio]
gi|156230200|gb|AAI52518.1| Zgc:171260 protein [Danio rerio]
Length = 452
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDPNY 86
D+ CP+C I K T ++ C H FC+EC+ + R N ECP CR RRS +D P
Sbjct: 8 DLTCPVCQDIFK-TPVLLSCSHSFCKECLQQFWRSKNTQECPVCR-----RRSSKDYPPI 61
Query: 87 DALISAL 93
+ + L
Sbjct: 62 NLALKNL 68
>gi|348536470|ref|XP_003455719.1| PREDICTED: hypothetical protein LOC100707220 [Oreochromis
niloticus]
Length = 491
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS---LRDDPN 85
+ C +C G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 262 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFE-ESNDCPKCGIQVHETNPLEMLRLDNT 320
Query: 86 YDALISALYPDIDKYEE-EELAF 107
+ +I L P + + EE +EL F
Sbjct: 321 LEEIIFKLVPGLRENEEQQELEF 343
>gi|344251973|gb|EGW08077.1| Breast cancer type 1 susceptibility protein-like [Cricetulus
griseus]
Length = 1790
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPIST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L+ + L+ L D +E
Sbjct: 73 LQGSTRFSQLVEELLKITDAFE 94
>gi|324518232|gb|ADY47043.1| Polycomb group RING finger protein 3 [Ascaris suum]
Length = 151
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC-----RTHC 74
+ L + + CPIC G + TV+ECLH FC+ C+ K +N CP C ++H
Sbjct: 24 ILLRTLNPHITCPICKGYFIEATTVIECLHTFCKSCLLKHFENESNCCPKCSGLIHQSHP 83
Query: 75 ASRRSLRDDPNYDALISALYPDIDKYEEE 103
+ S D L+ L P + EEE
Sbjct: 84 SHYVSF--DRTMQELVYKLVPGLQAREEE 110
>gi|345567439|gb|EGX50371.1| hypothetical protein AOL_s00076g135 [Arthrobotrys oligospora ATCC
24927]
Length = 577
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
++V+L +++ C IC + K T++ CLH FC CI R N+ CP+CR A
Sbjct: 89 IYVKL---ERELTCSICCELFKDPITLLNCLHNFCGSCIVPWGR-NNSSCPSCR---AEI 141
Query: 78 RSLRDDPNYDALISALYPDIDKY--EEEELAFHEEE 111
+ RD AL P ID E+ EL+F +E+
Sbjct: 142 KGCRD-------AFALKPLIDMLVKEKPELSFSKED 170
>gi|327266658|ref|XP_003218121.1| PREDICTED: zinc finger protein RFP-like [Anolis carolinensis]
Length = 475
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
E+R+++ CPICL KK ++ C H FC+ C+D+ + CP CR + L++D
Sbjct: 9 ELREELACPICLEFFKKPVSIA-CGHNFCQSCLDQYRKEKEASCPQCR-----KEVLKED 62
Query: 84 --PNYDAL 89
PN+ +
Sbjct: 63 IRPNWQLM 70
>gi|452824146|gb|EME31151.1| hypothetical protein Gasu_16460 [Galdieria sulphuraria]
Length = 475
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNY 86
++ CPICL ++ K + C HRFC +CI +++ L + CP CR +S L +
Sbjct: 354 EEYHCPICLSLLYKP-MALPCGHRFCGKCISRAILL-DFHCPVCRHDYSSGVRLERKKSL 411
Query: 87 DALISALYPDIDKYEEEELAFHEEERTR 114
+ + +PD + +EE+ E++R R
Sbjct: 412 ERFLRESFPDAWQKRKEEVLQDEKDRER 439
>gi|195015254|ref|XP_001984167.1| GH15153 [Drosophila grimshawi]
gi|193897649|gb|EDV96515.1| GH15153 [Drosophila grimshawi]
Length = 1285
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 8 LKFSGFFCRFVFVE-LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM----RL 62
L F+ FFCR +++ L E D CPIC + +M C H C++C++K R
Sbjct: 1027 LNFTRFFCRLKYLKHLKEDVDDTPCPICQTQDDERYVMMSCGHFLCQQCLEKMKKQLGRE 1086
Query: 63 GNNECPACRTH 73
G ++CP CR +
Sbjct: 1087 GTSKCPMCRQY 1097
>gi|167560893|ref|NP_001107963.1| breast cancer 1, early onset [Xenopus (Silurana) tropicalis]
gi|166796759|gb|AAI59160.1| brca1 protein [Xenopus (Silurana) tropicalis]
Length = 1592
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRRSLR 81
++K+++CPICL ++K+ +C H FC+ C+ + + + N CP C+T +RRSL+
Sbjct: 13 MQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKENVPCPLCKTE-VTRRSLQ 70
Query: 82 DDPNYDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKIFQRQSEALV 134
+ + L+ L I +E + F + +++I + ++ + +V
Sbjct: 71 ESHRFKLLVEGLLKIIKAFELDSGCKFFPSQENTVSGFESTIKDVLIKEDQPVV 124
>gi|301614743|ref|XP_002936851.1| PREDICTED: polycomb group RING finger protein 6-like [Xenopus
(Silurana) tropicalis]
Length = 296
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L ++ + C IC G + T+ ECLH FC+ CI K N CP C +
Sbjct: 68 MINLTDLNPYILCSICKGYLIDATTITECLHTFCKSCIVKHFYY-TNRCPKCNIVVHQTQ 126
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEEL-AFHEE 110
L R D ++ L D+++ E+ ++ AF++E
Sbjct: 127 PLYNIRLDRQLQDIVFKLVVDLEQREKNQMYAFYKE 162
>gi|363746044|ref|XP_003643507.1| PREDICTED: polycomb group RING finger protein 1-like, partial
[Gallus gallus]
Length = 249
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C T
Sbjct: 23 VKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNTKIHET 81
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + + EE+ + + R ++ Q S
Sbjct: 82 QPLLNLKLDRVMQDIVYKLVPGLQESEEKRIREFYQSRGLDRVTQPS 128
>gi|395826993|ref|XP_003786695.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Otolemur garnettii]
Length = 1803
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I +E
Sbjct: 76 STRFSQLVEELLKIIHAFE 94
>gi|431838990|gb|ELK00919.1| Putative E3 ubiquitin-protein ligase HECTD2 [Pteropus alecto]
Length = 951
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|410926339|ref|XP_003976636.1| PREDICTED: polycomb group RING finger protein 5-A-like [Takifugu
rubripes]
Length = 244
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C +C G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 17 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFE-DSNDCPKCGIQVHETNPLEMLRLDNT 75
Query: 86 YDALISALYPDI-DKYEEEELAF 107
+ +I L P + +K E++EL F
Sbjct: 76 LEEIIFKLVPGLREKEEQDELDF 98
>gi|354484980|ref|XP_003504663.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Cricetulus griseus]
Length = 1805
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LHAMQKILECPICLELIKEPIST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNEI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L+ + L+ L D +E
Sbjct: 73 LQGSTRFSQLVEELLKITDAFE 94
>gi|291228049|ref|XP_002733998.1| PREDICTED: lethal (3) 73Ah-like [Saccoglossus kowalevskii]
Length = 321
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC--RTH-CA 75
+V+L +I + + C +C G + T+ ECLH FC+ CI K + + CP C + H
Sbjct: 58 YVKLIDINQYITCQLCGGYLVDATTITECLHTFCKSCIVKYLE-TSILCPTCDVKIHETW 116
Query: 76 SRRSLRDDPNYDALISALYPDIDKYEEEELAFHEEER 112
S+R D ++ L P +K E+ +ER
Sbjct: 117 PYYSIRLDRTMQDIVHKLLPQTEKEEKRRQGIFYKER 153
>gi|307189309|gb|EFN73740.1| Polycomb group protein Psc [Camponotus floridanus]
Length = 1377
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC--ASRRSLR 81
+I + + C +C G + T++ECLH FCR CI K++ +CP+C+ H ++ +++
Sbjct: 12 DINQHLVCLLCRGYLIDATTIVECLHSFCRSCILKALSTS-AQCPSCK-HALNKAKPNIK 69
Query: 82 DDPNYDALISALYPDIDKYEEEEL 105
D ++ L P + Y E L
Sbjct: 70 ADKALQEIVYKLVPGL--YHREML 91
>gi|340375861|ref|XP_003386452.1| PREDICTED: polycomb group RING finger protein 1-like [Amphimedon
queenslandica]
Length = 238
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
+I + + C +C G + T++ECLH FC+ CI K ++ N CP C T
Sbjct: 4 DINQHITCSLCAGYLIDATTIIECLHTFCKTCIVKYLQ-NCNSCPVCNT 51
>gi|157114431|ref|XP_001652268.1| ring finger protein [Aedes aegypti]
gi|108877312|gb|EAT41537.1| AAEL006839-PA [Aedes aegypti]
Length = 194
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L + K + C IC G TV ECLH FC+ C+ K + NN CP C+
Sbjct: 5 IKLKTLNKHITCEICKGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTCQ 55
>gi|449019079|dbj|BAM82481.1| probable DNA repair protein RAD5 [Cyanidioschyzon merolae strain
10D]
Length = 1126
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDK---SMRLGNNECPACRTHCA 75
CPICL I + C H FCR+CI S R GN +CP CR C+
Sbjct: 848 CPICLESIDDAVALRNCAHVFCRDCILTLLLSNRHGNAQCPVCRKGCS 895
>gi|383858055|ref|XP_003704518.1| PREDICTED: uncharacterized protein LOC100879416 [Megachile
rotundata]
Length = 1378
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL- 80
L ++ + C +C G T++ECLH FCR CI K + N CP C + L
Sbjct: 12 LSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLL 70
Query: 81 --RDDPNYDALISALYP 95
R D ++ L P
Sbjct: 71 NIRPDHTLQDIVYKLVP 87
>gi|145516643|ref|XP_001444210.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411621|emb|CAK76813.1| unnamed protein product [Paramecium tetraurelia]
Length = 432
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
F + E+ +V CPIC II R EC FC CI+K + N +CP CR
Sbjct: 65 FNYAEVKVFLDEVICPICCQIIVNPRVCKECDQSFCGRCIEKWFQNSNQQCPCCR 119
>gi|414872711|tpg|DAA51268.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 458
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRTH--CASRRSLRD 82
+ CP+C G++++ + CLH FCRECI + + N+E CP C C LR
Sbjct: 19 MTCPLCRGLLREATAITVCLHTFCRECILEKI---NDEEIDCCPVCNIDLGCDPEEKLRP 75
Query: 83 DPNYDALISALYP 95
D N + + ++P
Sbjct: 76 DHNLQDIRNKVFP 88
>gi|328793199|ref|XP_397419.4| PREDICTED: hypothetical protein LOC413984 [Apis mellifera]
Length = 1395
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL- 80
L ++ + C +C G T++ECLH FCR CI K + N CP C + L
Sbjct: 12 LSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLL 70
Query: 81 --RDDPNYDALISALYP 95
R D ++ L P
Sbjct: 71 NIRPDHTLQDIVYKLVP 87
>gi|338711847|ref|XP_001492115.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Equus caballus]
Length = 1856
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLRIIHAFE 94
>gi|391336808|ref|XP_003742770.1| PREDICTED: polycomb group RING finger protein 3-like [Metaseiulus
occidentalis]
Length = 250
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 16/91 (17%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT------- 72
++L + + C IC G + TV ECLH FC+ C+ K + N CP C T
Sbjct: 5 IKLKTLNVHITCRICKGYLIDATTVTECLHTFCKSCLVKHLE-EKNTCPQCETLIHQSHP 63
Query: 73 --HCASRRSLRDDPNYDALISALYPDIDKYE 101
+ A R+++D ++ L PD+ K E
Sbjct: 64 LNYVAYDRTMQD------VVYRLVPDLQKKE 88
>gi|170068277|ref|XP_001868804.1| polycomb group RING finger protein 3 [Culex quinquefasciatus]
gi|167864343|gb|EDS27726.1| polycomb group RING finger protein 3 [Culex quinquefasciatus]
Length = 223
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
++L + K + C IC G TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNKHITCEICSGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|157114429|ref|XP_001652267.1| ring finger protein [Aedes aegypti]
gi|108877311|gb|EAT41536.1| AAEL006839-PB [Aedes aegypti]
Length = 223
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L + K + C IC G TV ECLH FC+ C+ K + NN CP C+
Sbjct: 5 IKLKTLNKHITCEICKGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTCQ 55
>gi|432880346|ref|XP_004073652.1| PREDICTED: polycomb group RING finger protein 3-like [Oryzias
latipes]
Length = 249
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+ L I + C +C G + TV ECLH FCR C+ K + NN CP CR
Sbjct: 14 INLCHINAHITCRLCEGYLIDATTVTECLHTFCRSCLVKYLE-ENNTCPTCR 64
>gi|338711849|ref|XP_001492138.3| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Equus caballus]
Length = 755
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRS 79
L ++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RS
Sbjct: 15 LNAMQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRS 72
Query: 80 LRDDPNYDALISALYPDIDKYE 101
L++ + L+ L I +E
Sbjct: 73 LQESTRFSQLVEELLRIIHAFE 94
>gi|350422954|ref|XP_003493340.1| PREDICTED: hypothetical protein LOC100746991 [Bombus impatiens]
Length = 1391
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL- 80
L ++ + C +C G T++ECLH FCR CI K + N CP C + L
Sbjct: 12 LSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLL 70
Query: 81 --RDDPNYDALISALYP 95
R D ++ L P
Sbjct: 71 NIRPDHTLQDIVYKLVP 87
>gi|198422095|ref|XP_002129149.1| PREDICTED: similar to polycomb group ring finger 1 [Ciona
intestinalis]
Length = 321
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS--- 76
++L ++ + C IC G + T+ ECLH FC+ CI K + + CP C +
Sbjct: 118 IKLADLNIHISCKICCGYLVDATTITECLHSFCKSCITKHLAVYLT-CPICDVKLQNANI 176
Query: 77 RRSLRDDPNYDALISALYPDIDKYEEEE-LAFHE 109
S++ D ++ L P I E L FH+
Sbjct: 177 YSSVKADIVLQDIVDKLLPGIQTMENRNFLEFHK 210
>gi|380028079|ref|XP_003697739.1| PREDICTED: uncharacterized protein LOC100867025 [Apis florea]
Length = 1744
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA-SRRSL 80
+ ++K +QC ICL II C HRFCR CI ++ N CP C +CA RRS+
Sbjct: 15 IKNMQKCLQCTICLQIISDP-VKTHCGHRFCRICIQPVIQNKNALCPLC--NCAIQRRSI 71
Query: 81 RDDPNYDALISALYPDID 98
D N I L ID
Sbjct: 72 SKDENTAIYIKKLQNIID 89
>gi|380027905|ref|XP_003697655.1| PREDICTED: uncharacterized protein LOC100865279 [Apis florea]
Length = 1303
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL- 80
L ++ + C +C G T++ECLH FCR CI K + N CP C + L
Sbjct: 12 LSKLNDQLTCKLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLL 70
Query: 81 --RDDPNYDALISALYP 95
R D ++ L P
Sbjct: 71 NIRPDYTLQDIVYKLVP 87
>gi|225718860|gb|ACO15276.1| Polycomb group RING finger protein 3 [Caligus clemensi]
Length = 230
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+EL +I + + C IC G + TV ECLH FC+ CI K + +N CP C
Sbjct: 8 IELRDINEMITCKICQGYLIDATTVTECLHTFCKSCIVKHLE-DSNTCPEC 57
>gi|326678847|ref|XP_001342383.3| PREDICTED: tripartite motif-containing protein 35-like [Danio
rerio]
Length = 452
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDD 83
D CP+C I K T ++ C H FC+EC+ + R N ECP CR RRS + D
Sbjct: 8 DYSCPVCHDIFK-TPVILSCTHSFCKECLQQFWRSKNTQECPVCR-----RRSSKKD 58
>gi|156372722|ref|XP_001629185.1| predicted protein [Nematostella vectensis]
gi|156216179|gb|EDO37122.1| predicted protein [Nematostella vectensis]
Length = 174
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 19/132 (14%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN-NECPACRTHCASR- 77
++L E+ + C +C G + K T+ ECLH FCR CI + G N CP C
Sbjct: 4 LQLRELNPHITCGLCRGYLIKPTTITECLHTFCRSCIILRFQDGEVNLCPTCNILIHETN 63
Query: 78 --RSLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIA-----KIFQRQS 130
LR D + +I L P E+E R K+ S + K+ + +
Sbjct: 64 PLEMLRSDKTLEDIIYKLVP----------GLQEDEIRRTKEFYESYSLSPPCKVIKTEG 113
Query: 131 EALVKRRTPGKD 142
+ R P KD
Sbjct: 114 DTSALHRKPVKD 125
>gi|91084985|ref|XP_972531.1| PREDICTED: similar to B lymphoma Mo-MLV insertion region (mouse)
[Tribolium castaneum]
gi|270008538|gb|EFA04986.1| hypothetical protein TcasGA2_TC015065 [Tribolium castaneum]
Length = 328
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
++ ++ + + C +C G T++ECLH FCR CI K + N CP C + L
Sbjct: 8 QITDLNQHLICKLCKGYFVDATTIIECLHSFCRSCIVKYL-AANKYCPVCDVQVHKSKPL 66
Query: 81 ---RDDPNYDALISALYP 95
R D ++ L P
Sbjct: 67 LNIRQDRTLQDIVYKLVP 84
>gi|241707385|ref|XP_002413296.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
gi|215507110|gb|EEC16604.1| DNA-binding protein mel-18, putative [Ixodes scapularis]
Length = 1230
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 13 FFCRFVFVELPEIRKDV-------QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN 65
+ C F+ P R V CP+C G + T+++CLH FC+ CI K + G++
Sbjct: 21 YPCIAAFMRPPWERPPVASLNSCLSCPLCRGYLVDAVTLVKCLHSFCKSCILKHLETGSS 80
Query: 66 ECPAC 70
CP C
Sbjct: 81 -CPVC 84
>gi|55925211|ref|NP_001007348.1| uncharacterized protein LOC492475 [Danio rerio]
gi|55250096|gb|AAH85530.1| Zgc:103481 [Danio rerio]
Length = 381
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDPNYDAL 89
CP+C I K V+ C H FC+EC+ K N ECP CR RRS RDDP + +
Sbjct: 14 CPVCCKIYKDP-VVLSCSHSFCQECLQKFWITCNTLECPVCR-----RRSSRDDPPCNLV 67
Query: 90 ISAL 93
+ L
Sbjct: 68 LKNL 71
>gi|256077316|ref|XP_002574952.1| ring finger protein 151 [Schistosoma mansoni]
gi|353233298|emb|CCD80653.1| putative ring finger protein 151 [Schistosoma mansoni]
Length = 204
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
I++ C IC ++ TR ++ C H+FCREC+ ++ N CP C R
Sbjct: 66 IKQTFLCSICHNLLVNTRLLL-CGHQFCRECLYYWFKIS-NTCPLC----------RKSI 113
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNKQIQ 119
NY +ISA+ +ID + +E + + +N++IQ
Sbjct: 114 NYHYIISAI--NIDNFLDELINNGCNDLLKNQRIQ 146
>gi|224131246|ref|XP_002328491.1| predicted protein [Populus trichocarpa]
gi|222838206|gb|EEE76571.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C ++K+ T+ CLH FCR+CI + +L + E CP C + C LR D
Sbjct: 17 MTCPLCNKLLKEATTIFSCLHTFCRKCIYE--KLSDEEVDCCPVCNMNLGCLPVDKLRAD 74
Query: 84 PNYDALISALYP 95
N + + ++P
Sbjct: 75 HNLQDIRAKIFP 86
>gi|194754545|ref|XP_001959555.1| GF11991 [Drosophila ananassae]
gi|190620853|gb|EDV36377.1| GF11991 [Drosophila ananassae]
Length = 1606
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
V L + + C +C G + T++ECLH FC C+ +R CP C+ +++
Sbjct: 234 VLLTAVNPHIICHLCTGYLVDATTIVECLHSFCHSCLINHLR-KERFCPRCKMVINSAKP 292
Query: 79 SLRDDPNYDALISALYPDIDKYEEEEL---AFHEE 110
+++ D A++ L P + YE E + AF+++
Sbjct: 293 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKD 325
>gi|118386059|ref|XP_001026151.1| zinc finger protein [Tetrahymena thermophila]
gi|89307918|gb|EAS05906.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 1075
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 40 KTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
K + +CLH FCRECIDK +RL CP CRT
Sbjct: 1029 KDTILQKCLHPFCRECIDKQIRLRQRTCPKCRT 1061
>gi|326497399|dbj|BAK05789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH--CASRRSLRDDPN 85
V CP+C G ++ EC H FCRECI K + E CP C LR D +
Sbjct: 19 VTCPLCRGYFREASAFSECGHTFCRECIMKKIDEEEIEACPVCDVALGITPEEKLRADIS 78
Query: 86 YDALISALYP---DIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRT 138
A+ + L+P ++D E + + + R+ I K+ + + L RRT
Sbjct: 79 IQAIRNNLFPPKSEVDAVEAPTITLPAKRKERSISSLVEIPKVATQST--LTGRRT 132
>gi|320170327|gb|EFW47226.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 413
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
CPIC ++ T + C HR+C+ CID+ + + CP C T L+ D YDAL+
Sbjct: 8 CPICCSLLSNTTITIPCGHRYCKSCIDECLN-RKSVCPCCNTRLNGGVVLQRDHQYDALL 66
Query: 91 SAL 93
+
Sbjct: 67 EMI 69
>gi|192455614|ref|NP_001122184.1| polycomb group RING finger protein 5-A [Danio rerio]
gi|306755928|sp|B3DK16.1|PCF5A_DANRE RecName: Full=Polycomb group RING finger protein 5-A
gi|190338518|gb|AAI63687.1| Zgc:194668 [Danio rerio]
gi|190338958|gb|AAI63702.1| Zgc:194668 [Danio rerio]
Length = 234
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K V ECLH FC+ CI + +NECP C LR D
Sbjct: 16 ITCSICRGYLIKPTAVTECLHTFCKSCIVQHFE-ESNECPECGIQVHETNPLEMLRLDKT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +I L P + + EE + E E R +I+++
Sbjct: 75 LEEIIFKLVPGLREKEEHQ----ESEFWRKHKIKSN 106
>gi|350409751|ref|XP_003488833.1| PREDICTED: hypothetical protein LOC100740095 [Bombus impatiens]
Length = 1794
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
E+ I+K +QC ICL I + + C HRFCR+CI ++ N CP C RRS+
Sbjct: 15 EIRNIQKCLQCTICLNTISEPVKTL-CGHRFCRQCIQTLLQNKNALCPLC-NRAIQRRSI 72
Query: 81 RDDPNYDALISAL 93
D + I L
Sbjct: 73 SKDEHMILYIDGL 85
>gi|354474513|ref|XP_003499475.1| PREDICTED: polycomb complex protein BMI-1-like [Cricetulus griseus]
Length = 523
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 206 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 264
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 265 LLNIRSDKTLQDIVYKLVPGLFKNE 289
>gi|414871833|tpg|DAA50390.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 526
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTH--CASRRSLRDDPN 85
+ CP+C +++ T+ ECLH FCR+CI + E CP C+ C LR D +
Sbjct: 111 MTCPLCRRLLRDATTISECLHTFCRKCIYQKFDDEEVECCPVCKIDLGCTPTEKLRADHS 170
Query: 86 YDALISALYP 95
+ S L+P
Sbjct: 171 LQDVRSKLFP 180
>gi|195426447|ref|XP_002061346.1| GK20772 [Drosophila willistoni]
gi|194157431|gb|EDW72332.1| GK20772 [Drosophila willistoni]
Length = 1381
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS---LRDDPN 85
+ C IC G + TV C H +CR CI K + L + CP C++ + S LR D
Sbjct: 19 ITCNICQGYMIDPTTVDYCYHTYCRSCILKHL-LRDAYCPECKSSGGKQISEDNLRPDNT 77
Query: 86 YDALISALYPDIDKYEEEELAFHEEER 112
+LI L P + + E +LA EE++
Sbjct: 78 KRSLIYKLVPGLYQRECNQLAEFEEQQ 104
>gi|113678782|ref|NP_001038429.1| nuclear factor 7, brain-like [Danio rerio]
Length = 451
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDPN 85
+D+ CP+C I K V+ C H FC+EC+ + R ECP CR+ S RDDP
Sbjct: 9 EDLSCPVCCEIFKNP-VVLSCSHSFCKECLQQFWRTKKTQECPVCRS------SSRDDPP 61
Query: 86 YDALISAL 93
+ ++ L
Sbjct: 62 NNLILKNL 69
>gi|403413916|emb|CCM00616.1| predicted protein [Fibroporia radiculosa]
Length = 1012
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 31 CPICL---GIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS 76
C ICL G + R +M C H F ++C+DK +++G N CPACRT S
Sbjct: 958 CLICLDEYGAEDEVR-LMSCRHGFHKDCVDKWLQVGRNNCPACRTKGVS 1005
>gi|255551951|ref|XP_002517020.1| ring finger protein, putative [Ricinus communis]
gi|223543655|gb|EEF45183.1| ring finger protein, putative [Ricinus communis]
Length = 434
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRT 72
+ V VE ++ + CP+C + + T+ ECLH FCR+CI + ++ + E CP C
Sbjct: 6 QVVKVEREKLETCMTCPLCNKLFRDATTISECLHTFCRKCIYR--KITDEEFDNCPVCNI 63
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
C+ LR D + + L + +P
Sbjct: 64 DLGCSPLEKLRADHSLEDLKTKFFP 88
>gi|449283268|gb|EMC89948.1| Polycomb group RING finger protein 1, partial [Columba livia]
Length = 230
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C T
Sbjct: 4 VKVKMKELNEHIVCCLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNTKIHET 62
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + + EE+ + + R ++ Q S
Sbjct: 63 QPLLNLKLDRVMQDIVYKLVPGLQESEEKRIREFYQSRGLDRVTQPS 109
>gi|355566817|gb|EHH23196.1| E3 ubiquitin-protein ligase TRIM21 [Macaca mulatta]
gi|355752415|gb|EHH56535.1| E3 ubiquitin-protein ligase TRIM21 [Macaca fascicularis]
Length = 479
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
L + ++V CPICL + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQH 57
>gi|221110617|ref|XP_002163397.1| PREDICTED: polycomb group RING finger protein 3-like [Hydra
magnipapillata]
Length = 245
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL-GNNECPACRTHCASRR 78
+ + E+ ++ C IC G + + + ECLH FCR CI K + +CP C T
Sbjct: 5 ITVKELNQNFICAICNGYLIRPVAITECLHYFCRSCIVKYLETAAEYKCPNCSTLIHETN 64
Query: 79 ---SLRDDPNYDALISALYPDIDKYE 101
LR+D + L+ L P++ + E
Sbjct: 65 PWDMLREDKKLEFLVYKLVPNLAQNE 90
>gi|326507272|dbj|BAJ95713.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 521
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRT 72
V V+ + + + CP+C +++ TV ECLH FCR+CI K N+E CP C
Sbjct: 103 LVMVKRELLARCMTCPLCNRLLRDATTVSECLHTFCRKCIYKKF---NDEEVESCPVCNI 159
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
C LR D + + S ++P
Sbjct: 160 DLGCTPVEKLRADHSLHDVRSKIFP 184
>gi|67593286|ref|XP_665709.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656518|gb|EAL35482.1| hypothetical protein Chro.10374, partial [Cryptosporidium
hominis]
Length = 278
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
CPIC G + T+ ECLH FC+ CI + + ECP C
Sbjct: 47 CPICEGFFRGATTIRECLHTFCKACIIEHIESKGAECPKC 86
>gi|402894471|ref|XP_003910381.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Papio anubis]
Length = 468
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
L + ++V CPICL + ++ EC H FC+ECI + + G + CP CR H R
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQHFLLR 61
>gi|219518728|gb|AAI45592.1| Pcgf5 protein [Mus musculus]
Length = 255
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
+ +I L P + + + EL F ++ + + Q I+K+
Sbjct: 75 LEEIIFKLVPGLREQLQRELEFWKKNKPQENG-QDDISKV 113
>gi|167963460|ref|NP_001108175.1| uncharacterized protein LOC100137106 [Danio rerio]
gi|159155554|gb|AAI54569.1| Zgc:172170 protein [Danio rerio]
Length = 453
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 84
D+ CP+C I K T ++ C H FC+EC+ + R N ECP CR R+S +D P
Sbjct: 8 DLICPVCHEIFK-TPVILSCSHSFCQECLQQFWRSKNTRECPVCR-----RKSSKDHP 59
>gi|452820378|gb|EME27421.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 381
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR--LGNNECPACRTHCASRRSLRDDP 84
++ CPICL + + T + C H FCR CI +++ L N CP CR+ L +P
Sbjct: 159 ENFTCPICLYVFYEPIT-LRCSHTFCRSCISQAVYGPLNMNSCPVCRSE------LGLEP 211
Query: 85 N---YDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQ 129
++L++++ D E EER + + AS+ K +R+
Sbjct: 212 YEFALNSLLTSIIEDAFPLHAELSKRMHEERASDLSLDASVQKALRRR 259
>gi|395539960|ref|XP_003771930.1| PREDICTED: uncharacterized protein LOC100928474 [Sarcophilus
harrisii]
Length = 802
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 483 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 541
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 542 LLNIRSDKTLQDIVYKLVPGLFKNE 566
>gi|432901995|ref|XP_004076982.1| PREDICTED: polycomb group RING finger protein 6-like [Oryzias
latipes]
Length = 256
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL---RDDPN 85
++C +C G + T+ ECLH FC+ CI + +N CP C + L R D
Sbjct: 37 IRCGLCCGFLIDATTITECLHTFCKSCIVRHF-FHSNRCPTCTIVVHQTQPLYNIRPDRQ 95
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTAS 145
++ + P ++ E +++ +ER + + Q +VKR+ S
Sbjct: 96 LQDIVYKMVPFLEGLERQQICSFYKERG----LPVPKPVVLSPQGPGVVKRQKRDSFPLS 151
Query: 146 PFMTRPQRN 154
F P+ +
Sbjct: 152 VFTIPPELD 160
>gi|426240771|ref|XP_004014267.1| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Ovis
aries]
Length = 469
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|340718230|ref|XP_003397574.1| PREDICTED: hypothetical protein LOC100649216 [Bombus terrestris]
Length = 1792
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
E+ I+K +QC ICL I + + C HRFCR+CI ++ N CP C RRS+
Sbjct: 15 EIRNIQKCLQCTICLQTISEPVKTL-CGHRFCRQCIQTLLQSKNALCPLC-NRAIQRRSI 72
Query: 81 RDDPNYDALISAL 93
D + I L
Sbjct: 73 SKDEHMILYIDGL 85
>gi|384475583|ref|NP_001244974.1| tripartite motif containing 21 [Macaca mulatta]
gi|383421057|gb|AFH33742.1| E3 ubiquitin-protein ligase TRIM21 [Macaca mulatta]
Length = 475
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
L + ++V CPICL + ++ EC H FC+ECI + + G + CP CR H R
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKDGGSVCPVCRQHFLLR 61
>gi|195380027|ref|XP_002048772.1| GJ21231 [Drosophila virilis]
gi|194143569|gb|EDW59965.1| GJ21231 [Drosophila virilis]
Length = 1440
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA---SR 77
EL + + + C IC G + + TV C H +CR CI K + L + CP C++ S
Sbjct: 22 ELNQFNELLTCRICQGYMIEPTTVDACYHTYCRSCILKHL-LRDVYCPQCKSSGGKHISE 80
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEELA-FHEEER 112
+LR D ALI L P + + E + LA F E+ +
Sbjct: 81 DNLRSDETLRALIYKLVPGLYQRECKRLAEFREQHQ 116
>gi|356535179|ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 450
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRT 72
+ V V+ +R + CP+C K T+ CLH FCR+CI + +L + E CP C
Sbjct: 5 QLVKVKRDTLRPCMTCPLCHNFFKDATTISTCLHTFCRKCIYE--KLSDEETDCCPVCNI 62
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
C LR D N + + ++P
Sbjct: 63 DLGCLPVEKLRPDHNLHDIRAKIFP 87
>gi|392901078|ref|NP_001255620.1| Protein MIG-32, isoform a [Caenorhabditis elegans]
gi|295982010|emb|CAA92594.4| Protein MIG-32, isoform a [Caenorhabditis elegans]
Length = 549
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 1 MAKYNIPLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM 60
+A+ +P + F V + + + C IC G I T+++C+H FC+ C+
Sbjct: 299 LAEDGVPKVMNNFRRATVKYNMEVLNPFITCGICDGYIVDATTIIDCMHTFCKSCLLTYF 358
Query: 61 RLGNNECPACRT 72
NN CP C T
Sbjct: 359 ESDNNTCPTCGT 370
>gi|66362364|ref|XP_628146.1| ring domain protein [Cryptosporidium parvum Iowa II]
gi|46227384|gb|EAK88319.1| ring domain protein [Cryptosporidium parvum Iowa II]
Length = 284
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
CPIC G + T+ ECLH FC+ CI + + ECP C
Sbjct: 47 CPICEGFFRGATTIRECLHTFCKACIIEHIESKGAECPKC 86
>gi|297266344|ref|XP_001105519.2| PREDICTED: polycomb group RING finger protein 1-like [Macaca
mulatta]
Length = 394
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 34 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKIHET 92
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + EE+ + + R ++ Q S
Sbjct: 93 QPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQPS 139
>gi|242033011|ref|XP_002463900.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
gi|241917754|gb|EER90898.1| hypothetical protein SORBIDRAFT_01g008520 [Sorghum bicolor]
Length = 336
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRTH--CASRRSLRD 82
+ CP+C G+++ + CLH FCRECI M N+E CP C C LR
Sbjct: 19 MTCPLCRGLLRAATAITLCLHTFCRECI---MEKINDEEVDCCPVCDIDLGCDPEEKLRP 75
Query: 83 DPNYDALISALYP 95
D N + + ++P
Sbjct: 76 DHNLQDIRNKVFP 88
>gi|89271831|emb|CAJ82238.1| novel protein similar to brca1 [Xenopus (Silurana) tropicalis]
Length = 548
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM---RLGNNECPACRTHCASRRSLR 81
++K+++CPICL ++K+ +C H FC+ C+ + + + N CP C+T +RRSL+
Sbjct: 13 MQKNLECPICLELMKEP-VATKCDHIFCKFCMLQLLSKKKKENVPCPLCKTE-VTRRSLQ 70
Query: 82 DDPNYDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKIFQRQSEALV 134
+ + L+ L I +E + F + +++I + ++ + +V
Sbjct: 71 ESHRFKLLVEGLLKIIKAFELDSGCKFFPSQENTVSGFESTIKDVLIKEDQPVV 124
>gi|395827235|ref|XP_003786810.1| PREDICTED: polycomb complex protein BMI-1 [Otolemur garnettii]
Length = 469
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|387017720|gb|AFJ50978.1| Polycomb complex protein BMI-1-like [Crotalus adamanteus]
Length = 327
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
R +++ E+ + C IC G T++ECLH FC+ CI + + CP C
Sbjct: 3 RTTCIKITELNPHLMCVICGGYFIDATTIIECLHSFCKTCIVHYLE-SSKYCPICDVQVH 61
Query: 76 SRRSL---RDDPNYDALISALYPDIDKYE 101
R L R D ++ L P + K E
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|403278207|ref|XP_003945245.1| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
[Saimiri boliviensis boliviensis]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|348556239|ref|XP_003463930.1| PREDICTED: polycomb complex protein BMI-1-like [Cavia porcellus]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|402879774|ref|XP_003903504.1| PREDICTED: polycomb complex protein BMI-1 [Papio anubis]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|47223482|emb|CAF97969.1| unnamed protein product [Tetraodon nigroviridis]
Length = 300
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C +
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLE-TNKYCPICDVQVHKTKP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|350589578|ref|XP_003130828.2| PREDICTED: polycomb complex protein BMI-1-like [Sus scrofa]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|196002751|ref|XP_002111243.1| hypothetical protein TRIADDRAFT_54995 [Trichoplax adhaerens]
gi|190587194|gb|EDV27247.1| hypothetical protein TRIADDRAFT_54995 [Trichoplax adhaerens]
Length = 169
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECI----DKSMRLGNNECPACRTHCA 75
V++ +I V C +C G + T+ ECLH FCR CI DKS+ CP C
Sbjct: 7 VKVQQINPHVICYLCQGYLIDATTITECLHSFCRSCIVKHFDKSLL-----CPLCNLRVH 61
Query: 76 SRR---SLRDDPNYDALISALYPDIDK 99
R ++R D ++ L P + K
Sbjct: 62 ETRPHLNIRSDTTLQEIVYGLVPGLLK 88
>gi|403159874|ref|XP_003890670.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168278|gb|EHS63609.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 282
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
C +CLG++ ++C H F RECID +R G CP+CR +S + D
Sbjct: 141 CAVCLGLLDSDLRSLKCKHVFHRECIDGWLRGGRPTCPSCRAEISSGHKIVAD 193
>gi|147906248|ref|NP_001084738.1| uncharacterized protein LOC414708 [Xenopus laevis]
gi|46329615|gb|AAH68930.1| MGC83173 protein [Xenopus laevis]
Length = 317
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
R + +++ E+ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 3 RTMRIKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLE-AHKFCPMCDSQVH 61
Query: 76 SRR---SLRDDPNYDALISALYPDIDKYE 101
R S+R D ++ L P + + E
Sbjct: 62 KGRPLLSIRSDKTLQDIVYKLVPGLFRGE 90
>gi|397501528|ref|XP_003821435.1| PREDICTED: polycomb complex protein BMI-1 [Pan paniscus]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|322794453|gb|EFZ17525.1| hypothetical protein SINV_11876 [Solenopsis invicta]
Length = 1378
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA--SRRS 79
L ++ + C +C G + TV+ECLH FCR CI K + + CP+C+ H ++ +
Sbjct: 7 LRDVNPHLICLLCRGYLIDATTVVECLHSFCRSCILKYLSTAAH-CPSCK-HAINKAKPN 64
Query: 80 LRDDPNYDALISALYPDIDKYEEEEL 105
++ D ++ L P + Y +E L
Sbjct: 65 IKADKTLQEIVYKLVPGL--YHKEML 88
>gi|441625691|ref|XP_003257751.2| PREDICTED: LOW QUALITY PROTEIN: polycomb complex protein BMI-1
isoform 2 [Nomascus leucogenys]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|224131692|ref|XP_002321154.1| predicted protein [Populus trichocarpa]
gi|222861927|gb|EEE99469.1| predicted protein [Populus trichocarpa]
Length = 672
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
E E+ KD CPIC+ IIK + C H FC CI +R N+CP C + + +
Sbjct: 39 EEAELEKDFLCPICMQIIKDAFLTV-CGHSFCYMCITTHLR-NKNDCPCCSHYLTTNQLF 96
Query: 81 RDDPNY 86
PN+
Sbjct: 97 ---PNF 99
>gi|194227110|ref|XP_001496144.2| PREDICTED: COMM domain-containing protein 3-like isoform 1 [Equus
caballus]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|291402220|ref|XP_002717444.1| PREDICTED: BMI1 polycomb ring finger oncogene [Oryctolagus
cuniculus]
Length = 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|357509293|ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger, RING-type; ATP-requiring DNA helicase
RecQ [Medicago truncatula]
gi|355499950|gb|AES81153.1| DNA repair protein RAD5 [Medicago truncatula]
Length = 844
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 27 KDVQCPICLGIIKKTRTVMEC-LHRFCRECIDKSMRLGNNECPACR 71
+D CPICL T V+ C H FCRECI K+++ N+ CP CR
Sbjct: 591 EDFDCPICLS--PPTDIVITCCAHIFCRECILKTLQRSNSSCPLCR 634
>gi|444731073|gb|ELW71439.1| Polycomb complex protein BMI-1 [Tupaia chinensis]
Length = 383
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 97 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 155
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 156 LLNIRSDKTLQDIVYKLVPGLFKNE 180
>gi|56119143|ref|NP_001007989.1| polycomb complex protein BMI-1 [Gallus gallus]
gi|82196525|sp|Q5SDR3.1|BMI1_CHICK RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|52078091|gb|AAU25821.1| BMI1 [Gallus gallus]
Length = 326
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|323276616|ref|NP_001190991.1| COMMD3-BMI1 read-through protein [Homo sapiens]
Length = 469
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|414873396|tpg|DAA51953.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 387
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C +++ T+ ECLH FCR+CI S N E CP C CA LR D
Sbjct: 42 LTCPLCGRLLRDAATITECLHTFCRKCI--SEEFVNKEVCCCPVCSIDLGCAPLEKLRID 99
Query: 84 PNYDALISALYPDIDKYEEE 103
+ + S ++P + E+
Sbjct: 100 HSLQYVRSKVFPSKKRKVED 119
>gi|348512208|ref|XP_003443635.1| PREDICTED: polycomb complex protein BMI-1-like [Oreochromis
niloticus]
Length = 567
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 236 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-SKYCPICDVQVHKTKP 294
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 295 LLNIRSDKTLQDIVYKLVPGLFKNE 319
>gi|226507070|ref|NP_001150954.1| protein binding protein [Zea mays]
gi|195643190|gb|ACG41063.1| protein binding protein [Zea mays]
Length = 387
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C +++ T+ ECLH FCR+CI S N E CP C CA LR D
Sbjct: 42 LTCPLCGRLLRDAATITECLHTFCRKCI--SEEFVNKEVCCCPVCSIDLGCAPLEKLRID 99
Query: 84 PNYDALISALYPDIDKYEEE 103
+ + S ++P + E+
Sbjct: 100 HSLQYVRSKVFPSKKRKVED 119
>gi|84996901|ref|XP_953172.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304168|emb|CAI76547.1| hypothetical protein, conserved [Theileria annulata]
Length = 359
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ KD +CPIC I+ K T C H FC+ CID+++ N CP CR ++ S
Sbjct: 3 VPKDFECPICFNILYKPVTT-SCGHNFCKFCIDQAIDSSPN-CPLCRVPLTTQYS 55
>gi|297823085|ref|XP_002879425.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
gi|297325264|gb|EFH55684.1| hypothetical protein ARALYDRAFT_902362 [Arabidopsis lyrata subsp.
lyrata]
Length = 675
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
P++ KD+ CPIC+ IIK + C H FC CI +R ++CP C H
Sbjct: 44 PDLDKDLLCPICMQIIKDA-FLTACGHSFCYMCIITHLR-NKSDCPCCSQH 92
>gi|326678845|ref|XP_001342327.4| PREDICTED: tripartite motif-containing protein 35-like [Danio
rerio]
Length = 459
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDPNY 86
D CP+C I K T ++ C H FC+EC+ + ++ N ECP CR R S+ D P
Sbjct: 8 DYICPVCQDIFK-TPVILSCGHSFCKECLQEFWKIKNTQECPVCR-----RPSMADPPVN 61
Query: 87 DAL 89
AL
Sbjct: 62 LAL 64
>gi|148224664|ref|NP_001084523.1| polycomb group ring finger 2 [Xenopus laevis]
gi|46250310|gb|AAH68725.1| MGC81178 protein [Xenopus laevis]
Length = 317
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C + R
Sbjct: 7 IKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLE-AHKFCPMCDSQVHKGRP 65
Query: 79 --SLRDDPNYDALISALYPDI 97
S+R D ++ L P +
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGL 86
>gi|403159876|ref|XP_003320432.2| hypothetical protein PGTG_01344 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168279|gb|EFP76013.2| hypothetical protein PGTG_01344 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 316
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
C +CLG++ ++C H F RECID +R G CP+CR +S + D
Sbjct: 175 CAVCLGLLDSDLRSLKCKHVFHRECIDGWLRGGRPTCPSCRAEISSGHKIVAD 227
>gi|354497382|ref|XP_003510799.1| PREDICTED: polycomb group RING finger protein 6-like [Cricetulus
griseus]
gi|344247413|gb|EGW03517.1| Polycomb group RING finger protein 6 [Cricetulus griseus]
Length = 213
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V L ++ + C IC G + T+ ECLH FC+ CI K +N CP C R
Sbjct: 93 VPLSQLTPYISCSICKGYLIDATTITECLHSFCKSCIVKHFD-HSNRCPKCSIVVHQSRP 151
Query: 80 ---LRDDPNYDALISALYPDIDKYEEEE 104
LR DP+ ++ + +++ E+++
Sbjct: 152 HSKLRLDPHLQNIVYKVVAGLEEKEKKQ 179
>gi|431895476|gb|ELK04992.1| Cytosolic purine 5'-nucleotidase [Pteropus alecto]
Length = 897
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 123 LINLSELTQYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 173
>gi|74211363|dbj|BAE26436.1| unnamed protein product [Mus musculus]
Length = 324
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKNRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|47224771|emb|CAG00365.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ L + ++C +C G + T+ ECLH FC+ CI K +N CP C +
Sbjct: 1 IPLNQFYPYIRCGLCCGFLIDASTITECLHTFCKSCIVKHF-FYSNRCPTCSIVVHETQP 59
Query: 80 L---RDDPNYDALISALYPDIDKYEEEEL 105
L R D ++ + P +++ E E++
Sbjct: 60 LYNIRPDRQLQDIVYKMIPFLEELEREQM 88
>gi|344306128|ref|XP_003421741.1| PREDICTED: E3 ubiquitin-protein ligase UHRF1 [Loxodonta africana]
Length = 878
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 66
P+ +GF + L + + QC C ++ + T M C H C++C+D+S R
Sbjct: 790 PVSGAGFK-----LFLSTVEETFQCICCQELVFRPVTTM-CQHNVCKDCLDRSFRAQVFS 843
Query: 67 CPACRTHCASRRSLRDDPNYDALISALYP 95
CPACR +++ + A++S L+P
Sbjct: 844 CPACRCDLGRNYAMQINQPLQAVLSQLFP 872
>gi|148676158|gb|EDL08105.1| mCG9550, isoform CRA_b [Mus musculus]
Length = 334
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 17 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 75
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 76 LLNIRSDKTLQDIVYKLVPGLFKNE 100
>gi|387018154|gb|AFJ51195.1| Polycomb group RING finger protein 5-like [Crotalus adamanteus]
Length = 256
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCCICKGYLIKPTTVTECLHTFCKSCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQIQ 119
+ +I L P + E+EL E +NK I+
Sbjct: 75 LEEIIFKLVPGL---REKELHREAEFWKKNKPIE 105
>gi|402685|gb|AAA32772.1| regulatory protein [Arabidopsis thaliana]
Length = 675
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
P++ KD+ CPIC+ IIK + C H FC CI +R ++CP C H
Sbjct: 44 PDLDKDLLCPICMQIIKDA-FLTACGHSFCYMCIITHLR-NKSDCPCCSQH 92
>gi|15225760|ref|NP_180854.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
gi|20141387|sp|P43254.2|COP1_ARATH RecName: Full=E3 ubiquitin-protein ligase COP1; AltName:
Full=Constitutive photomorphogenesis protein 1
gi|2702280|gb|AAB91983.1| COP1 regulatory protein [Arabidopsis thaliana]
gi|95147316|gb|ABF57293.1| At2g32950 [Arabidopsis thaliana]
gi|330253672|gb|AEC08766.1| E3 ubiquitin-protein ligase COP1 [Arabidopsis thaliana]
Length = 675
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
P++ KD+ CPIC+ IIK + C H FC CI +R ++CP C H
Sbjct: 44 PDLDKDLLCPICMQIIKDA-FLTACGHSFCYMCIITHLR-NKSDCPCCSQH 92
>gi|302792356|ref|XP_002977944.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii]
gi|300154647|gb|EFJ21282.1| hypothetical protein SELMODRAFT_408 [Selaginella moellendorffii]
Length = 835
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L I D CPICL T + C H FCR CI+K++ +CP CR
Sbjct: 601 LAMIGDDFDCPICLSP-PVTAIITRCAHVFCRRCIEKTLERDKRQCPMCR 649
>gi|147844369|emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
Length = 662
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C ++K+ T+ CLH FCR+CI + +L + E CP C C LR D
Sbjct: 17 MTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDEEVDCCPVCNIDLGCVPVDKLRPD 74
Query: 84 PNYDALISALYP 95
N + + ++P
Sbjct: 75 HNLQDIRAKIFP 86
>gi|344249026|gb|EGW05130.1| Polycomb complex protein BMI-1 [Cricetulus griseus]
Length = 324
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|193643640|ref|XP_001947143.1| PREDICTED: polycomb group RING finger protein 3-like
[Acyrthosiphon pisum]
Length = 224
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
++L + + C IC G + TV ECLH FC+ C+ K + NN CP C+
Sbjct: 4 LIKLKTLNCHITCKICRGYLVDATTVTECLHTFCKSCLVKHLE-ENNSCPTCQ 55
>gi|71896207|ref|NP_001025573.1| polycomb group ring finger 2 [Xenopus (Silurana) tropicalis]
gi|60552364|gb|AAH91007.1| pcgf2 protein [Xenopus (Silurana) tropicalis]
Length = 317
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C + R
Sbjct: 7 IKMTELNPHLMCALCGGYFIDAATIVECLHSFCKTCILRYLE-AHKFCPMCDSQVHKGRP 65
Query: 79 --SLRDDPNYDALISALYPDI 97
S+R D ++ L P +
Sbjct: 66 LLSIRSDKTLQDIVYKLVPGL 86
>gi|9795625|gb|AAF98443.1|AC021044_22 Hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 102/265 (38%), Gaps = 58/265 (21%)
Query: 102 EEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTRPQRNPRTAHLR 161
++EL E E+ +Q QAS + +RQ++ GK ++ F+ R R+P +
Sbjct: 360 QDELILSETEQINIQQGQASYMQTLKRQAKV-----DSGKRMSTNFVIR--RDPTGQCIF 412
Query: 162 RRRNSRGTEHQGSEDNEDENDDNGGKDSSSND---------------ERSAEVRPRRRKR 206
R +G ++DE G K E +R R K
Sbjct: 413 RPIPFKGMRKVRKHVDDDEGWSGGSKKVKVRGLTSSSGDGDSLSYPFENETTIR-NREKD 471
Query: 207 RSGIRSSQPSSSAANSDGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGS 266
R + P S+ + + G E +E S LV L WG+ G RS R G+
Sbjct: 472 RLMLEIFGPESTDDSDESGTEEEFMETNLMS------LV----SLQWGKRGKRS-MRKGT 520
Query: 267 -------------------ASGCNSKSSRSTRLNKLVEYLRSLQENNDELDVRLMLVSAD 307
C + + L+ + +Q +D++++LVS D
Sbjct: 521 WKRHILENHVGQHKNTQDEVKNCLYCETLVHSFSILIGVVSMMQ-----MDIQVLLVSMD 575
Query: 308 TQCAPSLQQPYLCCQPSLSVKQLCE 332
P+LQ P + C+P++++K LCE
Sbjct: 576 ASVIPNLQNPQVSCKPNVTLKSLCE 600
>gi|54695768|gb|AAV38256.1| B lymphoma Mo-MLV insertion region (mouse) [synthetic construct]
gi|61366456|gb|AAX42862.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|327274703|ref|XP_003222116.1| PREDICTED: polycomb complex protein BMI-1-like [Anolis
carolinensis]
Length = 473
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C IC G T++ECLH FC+ CI + + CP C R
Sbjct: 157 LKITELNPHLMCVICGGYFIDATTIIECLHSFCKTCIVHYLE-TSKYCPICDVQVHKTRP 215
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 216 LLNIRSDKTLQDIVYKLVPGLFKNE 240
>gi|417409780|gb|JAA51381.1| Putative locus-specific chromosome binding protein, partial
[Desmodus rotundus]
Length = 332
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 13 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 71
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 72 LLNIRSDKTLQDIVYKLVPGLFKNE 96
>gi|363743503|ref|XP_003642857.1| PREDICTED: polycomb group RING finger protein 2-like [Gallus
gallus]
Length = 321
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR- 78
+++ E+ + C +C G T++ECLH FC+ CI + + N CP C R
Sbjct: 7 IKITELNPHLMCALCGGYFIDAATIVECLHSFCKTCIVRYLE-ANKYCPMCDAQVHKTRP 65
Query: 79 --SLRDDPNYDALISALYPDI 97
S+R D ++ L P +
Sbjct: 66 LLSIRSDRTLQDVVYKLVPGL 86
>gi|332862823|ref|XP_001147119.2| PREDICTED: polycomb complex protein BMI-1 isoform 2, partial [Pan
troglodytes]
Length = 332
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 13 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 71
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 72 LLNIRSDKTLQDIVYKLVPGLFKNE 96
>gi|157819305|ref|NP_001100838.1| BMI1 polycomb ring finger oncogene [Rattus norvegicus]
gi|149021165|gb|EDL78772.1| polycomb group ring finger 4 (predicted) [Rattus norvegicus]
gi|195540247|gb|AAI68209.1| Bmi1 protein [Rattus norvegicus]
Length = 324
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|351709698|gb|EHB12617.1| Polycomb complex protein BMI-1 [Heterocephalus glaber]
Length = 326
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|432108191|gb|ELK33111.1| Polycomb complex protein BMI-1 [Myotis davidii]
Length = 326
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|302810562|ref|XP_002986972.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii]
gi|300145377|gb|EFJ12054.1| hypothetical protein SELMODRAFT_40849 [Selaginella moellendorffii]
Length = 849
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L I D CPICL T + C H FCR CI+K++ +CP CR
Sbjct: 596 LAMIGDDFDCPICLSP-PVTAIITRCAHVFCRRCIEKTLERDKRQCPMCR 644
>gi|209881694|ref|XP_002142285.1| zinc finger, C3HC4 type domain-containing protein
[Cryptosporidium muris RN66]
gi|209557891|gb|EEA07936.1| zinc finger, C3HC4 type domain-containing protein
[Cryptosporidium muris RN66]
Length = 279
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
++CP+C G + T+ ECLH FC CI + G CP C
Sbjct: 45 LECPLCKGFFRNATTIKECLHTFCNVCIINYIESGKESCPKC 86
>gi|54695770|gb|AAV38257.1| B lymphoma Mo-MLV insertion region (mouse) [Homo sapiens]
Length = 326
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|84000133|ref|NP_001033161.1| polycomb complex protein BMI-1 [Bos taurus]
gi|122138672|sp|Q32KX7.1|BMI1_BOVIN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|81674800|gb|AAI09872.1| BMI1 polycomb ring finger oncogene [Bos taurus]
gi|296481449|tpg|DAA23564.1| TPA: polycomb complex protein BMI-1 [Bos taurus]
gi|440901143|gb|ELR52137.1| Polycomb complex protein BMI-1 [Bos grunniens mutus]
Length = 326
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|332027981|gb|EGI68032.1| Polycomb complex protein BMI-1 [Acromyrmex echinatior]
Length = 1426
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + + + C +C G T++ECLH FC+ CI K + N CP C R L
Sbjct: 12 LTRLNEHLTCKLCGGYFIDATTIIECLHSFCKSCIVKYLE-NNKYCPICEVQVHKSRPLL 70
Query: 82 DD-PNY 86
+ P+Y
Sbjct: 71 NIRPDY 76
>gi|60654235|gb|AAX29810.1| B lymphoma Mo-MLV insertion region [synthetic construct]
Length = 327
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|46559391|ref|NP_031578.2| polycomb complex protein BMI-1 [Mus musculus]
gi|115066|sp|P25916.1|BMI1_MOUSE RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|192201|gb|AAA37299.1| zinc finger protein [Mus musculus]
gi|192203|gb|AAA37300.1| bmi-1 [Mus musculus]
gi|31565373|gb|AAH53708.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|38614119|gb|AAH56384.1| Bmi1 polycomb ring finger oncogene [Mus musculus]
gi|84872481|gb|ABC67286.1| PCGF4 [Mus musculus]
gi|148676156|gb|EDL08103.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676157|gb|EDL08104.1| mCG9550, isoform CRA_a [Mus musculus]
gi|148676159|gb|EDL08106.1| mCG9550, isoform CRA_a [Mus musculus]
Length = 324
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|48145939|emb|CAG33192.1| COMMD3 [Homo sapiens]
Length = 326
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|118399223|ref|XP_001031937.1| zinc finger protein [Tetrahymena thermophila]
gi|89286273|gb|EAR84274.1| zinc finger protein [Tetrahymena thermophila SB210]
Length = 307
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG---NNECPACRTHCASRR 78
I D+ C ICL ++ +++ CLH FC +C+++ + NN CP CR A +
Sbjct: 181 IENDLNCAICLELMHNPVSIIGCLHNFCGDCLNRFIYYNGTINNLCPTCRQPIADVK 237
>gi|307207694|gb|EFN85331.1| Polycomb complex protein BMI-1 [Harpegnathos saltator]
Length = 1474
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL- 80
L ++ + + C +C G T++ECLH FCR CI K + N CP C + L
Sbjct: 12 LSKLNEQLTCRLCGGYFIDATTIIECLHSFCRSCIVKYLE-NNKYCPICEVQVHKSKPLL 70
Query: 81 --RDDPNYDALISALYP 95
R D ++ L P
Sbjct: 71 NIRPDHTLQDIVYKLVP 87
>gi|224066301|ref|XP_002302072.1| predicted protein [Populus trichocarpa]
gi|222843798|gb|EEE81345.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSM-RLGNNECPACRTH--CASRRSLRDDPN 85
+ C +C +++ T+ ECLH FCR+CI + + G + CP C + C LR D N
Sbjct: 24 MTCLLCNKLLRDATTISECLHTFCRKCIYRRISNEGLDSCPICNINLGCVPLEKLRPDHN 83
Query: 86 YDALISALYP 95
+ S ++P
Sbjct: 84 LQDVRSKIFP 93
>gi|291873|gb|AAA19873.1| putative [Homo sapiens]
gi|371929009|gb|AEX59150.1| polycomb ring finger protein [Sus scrofa]
Length = 326
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|334348830|ref|XP_001367832.2| PREDICTED: polycomb complex protein BMI-1-like [Monodelphis
domestica]
Length = 589
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 270 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 328
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 329 LLNIRSDKTLQDIVYKLVPGLFKNE 353
>gi|27883842|ref|NP_005171.4| polycomb complex protein BMI-1 [Homo sapiens]
gi|197098134|ref|NP_001126098.1| polycomb complex protein BMI-1 [Pongo abelii]
gi|114692354|ref|XP_001136082.1| PREDICTED: polycomb complex protein BMI-1 isoform 2 [Pan
troglodytes]
gi|426364177|ref|XP_004049196.1| PREDICTED: polycomb complex protein BMI-1 [Gorilla gorilla gorilla]
gi|22258801|sp|P35226.2|BMI1_HUMAN RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4; AltName:
Full=RING finger protein 51
gi|75061773|sp|Q5R8L2.1|BMI1_PONAB RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|15341688|gb|AAH11652.1| BMI1 polycomb ring finger oncogene [Homo sapiens]
gi|55730352|emb|CAH91898.1| hypothetical protein [Pongo abelii]
gi|60814344|gb|AAX36297.1| B lymphoma Mo-MLV insertion region [synthetic construct]
gi|119606554|gb|EAW86148.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606556|gb|EAW86150.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606557|gb|EAW86151.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|119606560|gb|EAW86154.1| hCG2017627, isoform CRA_a [Homo sapiens]
gi|189053794|dbj|BAG36046.1| unnamed protein product [Homo sapiens]
gi|208965886|dbj|BAG72957.1| BMI1 polycomb ring finger oncogene [synthetic construct]
gi|355782688|gb|EHH64609.1| Polycomb group RING finger protein 4 [Macaca fascicularis]
gi|431917704|gb|ELK16969.1| Polycomb complex protein BMI-1 [Pteropus alecto]
Length = 326
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|195027950|ref|XP_001986845.1| GH20310 [Drosophila grimshawi]
gi|193902845|gb|EDW01712.1| GH20310 [Drosophila grimshawi]
Length = 1536
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA---SR 77
E+ E + C IC G + + TV C H +CR CI K + L + CP C+ S
Sbjct: 27 EMREFNDLMTCRICQGYMIEPTTVDYCYHTYCRSCILKHL-LRDVYCPQCKGSGGKQISE 85
Query: 78 RSLRDDPNYDALISALYPDIDKYEEEELAFHEEE 111
+LR D ALI L P + + E + L EE+
Sbjct: 86 DNLRSDDTMRALIYKLVPGLYQRECQRLVEFEEQ 119
>gi|328781291|ref|XP_003249954.1| PREDICTED: hypothetical protein LOC100576640 [Apis mellifera]
Length = 1727
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 22 LPEIRKDVQCPICLGIIKK-TRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA-SRRS 79
+ I+K +QC ICL I +TV C HRFCR CI ++ N CP C +CA RR+
Sbjct: 15 IKNIQKCLQCTICLQTISDPVKTV--CGHRFCRICIQTVIQNKNALCPLC--NCAIQRRN 70
Query: 80 LRDDPNYDALISAL 93
+ D N I+ L
Sbjct: 71 ISKDKNTAIYITQL 84
>gi|242021573|ref|XP_002431219.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
gi|212516468|gb|EEB18481.1| Polycomb group RING finger protein, putative [Pediculus humanus
corporis]
Length = 221
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
++L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|91094599|ref|XP_966675.1| PREDICTED: similar to posterior sex combs protein [Tribolium
castaneum]
Length = 798
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
++L EI + C +C G + T+ ECLH FCR CI K ++ N CP C ++
Sbjct: 10 IKLVEINSYLTCYLCKGYLIDATTISECLHSFCRSCIIKFLQ-KNCYCPVCEVIINKAKP 68
Query: 79 SLRDDPNYDALISALYPDI 97
L+ D ++ L P +
Sbjct: 69 CLKLDKTLQDIVYKLVPGL 87
>gi|68163489|ref|NP_001020133.1| polycomb complex protein BMI-1 [Felis catus]
gi|22256724|sp|Q9TST0.1|BMI1_FELCA RecName: Full=Polycomb complex protein BMI-1; AltName:
Full=Polycomb group RING finger protein 4
gi|6012977|emb|CAB57313.1| Bmi-1 protein [Felis catus]
Length = 326
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|356546514|ref|XP_003541671.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
[Glycine max]
Length = 979
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+L + +++CPIC ++ + + C H FC CI KSM+ + CP C+ +RR +
Sbjct: 3 DLERMAIELKCPICWSLLD-SAVSLTCNHLFCNSCIFKSMK-SASACPVCKIP-FTRREV 59
Query: 81 RDDPNYDALIS 91
R P+ D L+S
Sbjct: 60 RPAPHMDNLVS 70
>gi|355562340|gb|EHH18934.1| Polycomb group RING finger protein 4 [Macaca mulatta]
Length = 290
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|73948737|ref|XP_858578.1| PREDICTED: polycomb complex protein BMI-1 isoform 3 [Canis lupus
familiaris]
gi|301754703|ref|XP_002913196.1| PREDICTED: polycomb complex protein BMI-1-like [Ailuropoda
melanoleuca]
gi|281350791|gb|EFB26375.1| hypothetical protein PANDA_000973 [Ailuropoda melanoleuca]
Length = 326
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|431898266|gb|ELK06961.1| Tripartite motif-containing protein 4 [Pteropus alecto]
Length = 475
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACRTHCASR 77
+E ++++++ CPICL K ++ EC H FCR C+ ++ LG CP CR +S
Sbjct: 1 MEAEDLQEELTCPICLDYFKDPVSI-ECGHNFCRGCLKQNWALGGGSFPCPECR-QLSSS 58
Query: 78 RSLRDDPNY 86
SLR PN+
Sbjct: 59 ASLR--PNW 65
>gi|270016418|gb|EFA12864.1| hypothetical protein TcasGA2_TC004246 [Tribolium castaneum]
Length = 838
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
++L EI + C +C G + T+ ECLH FCR CI K ++ N CP C ++
Sbjct: 10 IKLVEINSYLTCYLCKGYLIDATTISECLHSFCRSCIIKFLQ-KNCYCPVCEVIINKAKP 68
Query: 79 SLRDDPNYDALISALYPDI 97
L+ D ++ L P +
Sbjct: 69 CLKLDKTLQDIVYKLVPGL 87
>gi|149412168|ref|XP_001511592.1| PREDICTED: polycomb complex protein BMI-1-like [Ornithorhynchus
anatinus]
Length = 326
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|314905008|gb|ADT61619.1| recombination activating protein 1, partial [Coleonyx brevis]
Length = 346
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 20 VELP-EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
V+ P + K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 240 VDYPADFVKSISCQICEHILADP-VEATCKHLFCRLCILKCLKVIGSYCPACRYPCFPTD 298
Query: 79 SLRDDPNYDALISALY---PDIDKYEEEELAFHEEERTRNK 116
+ ++ +++SAL P D YEE L + + +K
Sbjct: 299 LVNPVKSFQSILSALAVRCPVKDCYEEVTLGKYSHHLSSHK 339
>gi|224118164|ref|XP_002331573.1| predicted protein [Populus trichocarpa]
gi|222873797|gb|EEF10928.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
E+ KD+ CPIC+ IIK + C H FC CI +R N+CP C + +
Sbjct: 29 ELDKDILCPICMQIIKDA-FLTSCGHSFCYLCITTHLR-NKNDCPCCSHYLTNNHIF--- 83
Query: 84 PNY 86
PN+
Sbjct: 84 PNF 86
>gi|242088441|ref|XP_002440053.1| hypothetical protein SORBIDRAFT_09g025150 [Sorghum bicolor]
gi|241945338|gb|EES18483.1| hypothetical protein SORBIDRAFT_09g025150 [Sorghum bicolor]
Length = 996
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + ++++CPICL + ++ C H FC C+ +SM+ + CP C+ RR +R
Sbjct: 7 LERMGRELKCPICLSLFTSAVSIT-CNHIFCNACLTESMKSASC-CPVCKVP-FHRREIR 63
Query: 82 DDPNYDALISAL 93
P+ D L+S
Sbjct: 64 PAPHMDNLVSVF 75
>gi|387593728|gb|EIJ88752.1| hypothetical protein NEQG_01442 [Nematocida parisii ERTm3]
Length = 205
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 20 VELPEIRKDV---QCPICLGIIKKTRTV--MECLHRFCRECIDKSMRLGNNECPACR 71
E+PE++ + +CPICL I+K T+ + C H F EC+ + + +NECP CR
Sbjct: 136 AEIPEVKAEGGEGECPICLQNIEKEETIRKLICHHTFHSECVSEWLTSYSNECPMCR 192
>gi|291230597|ref|XP_002735252.1| PREDICTED: ring finger protein 110-like [Saccoglossus kowalevskii]
Length = 345
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FCR CI + + + CP C T R
Sbjct: 57 LKMTELNPHLMCVLCGGYFIDATTIIECLHSFCRTCIIRYLE-SSKYCPVCDTQVHKTRP 115
Query: 80 L---RDDPNYDALISALYPDI 97
L R D ++ L P +
Sbjct: 116 LQYIRPDRTLQNIVYKLVPGL 136
>gi|290987890|ref|XP_002676655.1| predicted protein [Naegleria gruberi]
gi|284090258|gb|EFC43911.1| predicted protein [Naegleria gruberi]
Length = 543
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN--------ECPACRTHCAS 76
+ ++ CPIC GI + +V+ CLH FC C+ + NN CP CR A+
Sbjct: 186 MANELTCPICSGIFYRPVSVIPCLHNFCSSCLSSWLNPSNNNSYFGQNMNCPTCR---AT 242
Query: 77 RRSLRDDPNYDAL 89
+ +R +P + L
Sbjct: 243 IQEVRKNPTLNNL 255
>gi|56422923|gb|AAV90776.1| recombination activating gene 1, partial [Leiocephalus carinatus]
Length = 945
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 16 RFVFVELP-EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 74
+ + V+ P + K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 246 KILAVDYPVDFVKSISCQICEHILADPVETT-CKHLFCRTCILKCLKVMGSYCPACRYPC 304
Query: 75 ASRRSLRDDPNYDALISAL---YPDIDKYEEEELAFHEEERTRNKQIQ 119
+ ++ ++++ L P ID EE L + +R+K+++
Sbjct: 305 FPTDLVSPVKSFLSILNGLPVRCPVIDCQEEFCLGKYHHHLSRHKEVE 352
>gi|387597389|gb|EIJ95009.1| hypothetical protein NEPG_00534 [Nematocida parisii ERTm1]
Length = 278
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 20 VELPEIRKDV---QCPICLGIIKKTRTV--MECLHRFCRECIDKSMRLGNNECPACR 71
E+PE++ + +CPICL I+K T+ + C H F EC+ + + +NECP CR
Sbjct: 209 AEIPEVKAEGGEGECPICLQNIEKEETIRKLICHHTFHSECVSEWLTSYSNECPMCR 265
>gi|148709823|gb|EDL41769.1| polycomb group ring finger 5, isoform CRA_b [Mus musculus]
Length = 238
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 18 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 76
Query: 86 YDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKI 125
+ +I L P + + E + EL F ++ + + Q I+K+
Sbjct: 77 LEEIIFKLVPGLREQELQRELEFWKKNKPQENG-QDDISKV 116
>gi|410908881|ref|XP_003967919.1| PREDICTED: polycomb complex protein BMI-1-like [Takifugu rubripes]
Length = 529
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 211 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLE-TSKYCPICDVQVHKTKP 269
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 270 LLNIRSDKTLQDIVYKLVPGLFKNE 294
>gi|146163961|ref|XP_001012744.2| hypothetical protein TTHERM_00086960 [Tetrahymena thermophila]
gi|146145853|gb|EAR92499.2| hypothetical protein TTHERM_00086960 [Tetrahymena thermophila
SB210]
Length = 536
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM-RLGNNECPACR 71
EL D++CPIC+ II+ +T + C FC +CI + + G +CP CR
Sbjct: 47 ELKNFLDDLKCPICINIIEDPKTCINCEANFCAQCIQQWVSHQGEKQCPCCR 98
>gi|357111109|ref|XP_003557357.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 390
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C +++ T+ ECLH FCR+CI S N E CP C CA LR D
Sbjct: 47 LTCPLCRRLLRDAATITECLHTFCRKCI--SEEFINKEVCRCPTCNIDLGCAPEEKLRVD 104
Query: 84 PNYDALISALYP 95
+ + S ++P
Sbjct: 105 HSLLYVRSKIFP 116
>gi|449442949|ref|XP_004139243.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis
sativus]
gi|449483021|ref|XP_004156472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis
sativus]
Length = 451
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C ++K+ T+ CLH FCR+CI + +L ++E CP C C LR D
Sbjct: 17 MTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDDEVDCCPVCDIDLGCLPVEKLRPD 74
Query: 84 PNYDALISALYP 95
N + + ++P
Sbjct: 75 HNLQDIRAKIFP 86
>gi|21313116|ref|NP_083784.1| polycomb group RING finger protein 5 [Mus musculus]
gi|12857499|dbj|BAB31023.1| unnamed protein product [Mus musculus]
gi|187954253|gb|AAI39259.1| Polycomb group ring finger 5 [Mus musculus]
gi|223461108|gb|AAI39260.1| Polycomb group ring finger 5 [Mus musculus]
Length = 236
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKI 125
+ +I L P + + E + EL F ++ + + Q I+K+
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNKPQENG-QDDISKV 114
>gi|427781769|gb|JAA56336.1| Putative polycomb group ring finger protein 3 [Rhipicephalus
pulchellus]
Length = 238
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 17 IRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLE-DNNTCPTC 66
>gi|354477533|ref|XP_003500974.1| PREDICTED: E3 ubiquitin-protein ligase TRIM50 [Cricetulus
griseus]
Length = 484
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACR 71
V +PE+ +QCPICL + K+ +++C H +C+ C+D + ++E CP CR
Sbjct: 5 VTVPELHDQLQCPICLEVFKEP-LMLQCGHSYCKGCLDSLSQHLDSELRCPVCR 57
>gi|55250220|gb|AAH85615.1| BRCA1 protein, partial [Homo sapiens]
Length = 624
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|363730755|ref|XP_419180.3| PREDICTED: E3 ubiquitin-protein ligase RNF138 [Gallus gallus]
Length = 246
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+D CPIC + K M C H FCR+C +MR CP CR
Sbjct: 13 EDFYCPICQEVFKTPVRTMNCQHVFCRKCFLTAMRESGTHCPLCR 57
>gi|354473588|ref|XP_003499016.1| PREDICTED: polycomb group RING finger protein 5-like [Cricetulus
griseus]
Length = 329
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKI 125
+ +I L P + + E + EL F ++ + + Q I+K+
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNKPQENG-QDDISKV 114
>gi|330802610|ref|XP_003289308.1| hypothetical protein DICPUDRAFT_98314 [Dictyostelium purpureum]
gi|325080606|gb|EGC34154.1| hypothetical protein DICPUDRAFT_98314 [Dictyostelium purpureum]
Length = 713
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL----GNNECPAC 70
++ K ++CP+C+GIIK+ + + C HR C ECI +++ +CP C
Sbjct: 3 KLMKAIKCPVCVGIIKQPQKIKPCKHRVCLECIQSAIKHSLDPSATKCPVC 53
>gi|120538363|gb|AAI30023.1| Tripartite motif-containing 50 [Mus musculus]
Length = 484
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACR 71
+ +PE++ +QCPICL + K+ +++C H +C++C+D + ++E CP CR
Sbjct: 5 LTVPELQDQLQCPICLEVFKEP-LMLQCGHSYCKDCLDNLSQHLDSELCCPVCR 57
>gi|110742039|dbj|BAE98955.1| photomorphogenesis repressor [Arabidopsis thaliana]
Length = 391
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
P++ KD+ CPIC+ IIK + C H FC CI +R ++CP C H
Sbjct: 44 PDLDKDLLCPICMQIIKDA-FLTACGHSFCYMCIITHLR-NKSDCPCCSQH 92
>gi|344277626|ref|XP_003410601.1| PREDICTED: COMM domain-containing protein 3-like isoform 1
[Loxodonta africana]
Length = 469
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + CP C R
Sbjct: 150 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVHYLE-TSKYCPICDVQVHKTRP 208
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 209 LLNIRSDKTLQDIVYKLVPGLFKNE 233
>gi|241998176|ref|XP_002433731.1| conserved hypothetical protein [Ixodes scapularis]
gi|215495490|gb|EEC05131.1| conserved hypothetical protein [Ixodes scapularis]
Length = 206
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS--RRSLRDDPNYDA 88
CP+CLG+ + + C H C C ++S+ L N ECP CR +S RR+ R+ D
Sbjct: 1 CPVCLGV-RAEPVTLPCGHGVCLTCFEQSLHLANKECPLCRLRISSWARRAAREGTLVDE 59
Query: 89 LISA 92
+ A
Sbjct: 60 ALRA 63
>gi|219881566|gb|ACL51942.1| recombination activating protein 1 [Leiocephalus raviceps]
Length = 963
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 16 RFVFVELP-EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 74
+ + V+ P + K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 246 KILAVDYPVDFVKSISCQICEHILADP-VETTCKHLFCRTCILKCLKVMGSYCPACRYPC 304
Query: 75 ASRRSLRDDPNYDALISAL---YPDIDKYEEEELAFHEEERTRNKQIQ 119
+ ++ ++++ L P ID EE L + +R+K+++
Sbjct: 305 FPTDLVSPVKSFLSILNGLPVRCPVIDCQEEFCLGKYHHHLSRHKEVE 352
>gi|407916974|gb|EKG10301.1| Zinc finger RING-type protein [Macrophomina phaseolina MS6]
Length = 723
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 21 ELPEIRKDVQCPICLGIIKK---TRTVMECLHRFCRECIDKSMRLGNNECPACR 71
E+ I D +C +CL ++ R +++C H F RECID+ + G N CP CR
Sbjct: 641 EMIAIPSDQRCLVCLSEYQRDEEARKLIKCGHLFHRECIDQWLTTGRNSCPLCR 694
>gi|332656170|gb|AEE81754.1| constitutively photomorphogenic 1 [Brassica rapa subsp. rapa]
Length = 677
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
P++ KD+ CPIC+ +IK + C H FC CI +R ++CP C H
Sbjct: 45 PDLDKDLLCPICMQVIKDA-FLTACGHSFCYMCIITHLR-NKSDCPCCSQH 93
>gi|12275860|gb|AAG50165.1|AF230386_1 tripartite motif protein TRIM31 alpha [Homo sapiens]
Length = 425
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECPACRTHCASRRSLR 81
+++++V CPICL I++K T+ +C H FC +CI + G +CP C+T S R R
Sbjct: 9 KLQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLCKT---SVR--R 62
Query: 82 DDPNYDALISALYPDIDKYEEEELAFHEEERT 113
D +++L+ L I + E+ +E T
Sbjct: 63 DAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|432113021|gb|ELK35599.1| Polycomb group RING finger protein 6 [Myotis davidii]
Length = 351
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 123 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 181
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L D+++ E++++ +ER
Sbjct: 182 PLYNIRLDRQLQDIVYKLVIDLEEREKKQMHDFYKER 218
>gi|417397603|gb|JAA45835.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 236
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELQRESEFWKKNK 102
>gi|91076158|ref|XP_971006.1| PREDICTED: similar to ring finger protein [Tribolium castaneum]
Length = 224
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNSHITCKICRGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPTCNIVIHQSHP 63
Query: 80 LRD---DPNYDALISALYPDIDKYE 101
L+ D ++ L P++ K E
Sbjct: 64 LQYISFDRTMQDIVYKLVPELQKNE 88
>gi|119581338|gb|EAW60934.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
gi|119581345|gb|EAW60941.1| breast cancer 1, early onset, isoform CRA_j [Homo sapiens]
Length = 1822
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|119581326|gb|EAW60922.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
gi|119581330|gb|EAW60926.1| breast cancer 1, early onset, isoform CRA_a [Homo sapiens]
Length = 719
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|75875129|gb|ABA29229.1| breast cancer 1 early onset [Homo sapiens]
gi|94315232|gb|ABF14462.1| early onset breast cancer 1 [Homo sapiens]
Length = 1822
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|326917562|ref|XP_003205066.1| PREDICTED: e3 ubiquitin-protein ligase RNF138-like [Meleagris
gallopavo]
Length = 246
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+D CPIC + K M C H FCR+C +MR CP CR
Sbjct: 13 EDFYCPICQEVFKTPVRTMNCQHVFCRKCFLTAMRESGTHCPLCR 57
>gi|119581327|gb|EAW60923.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
gi|119581342|gb|EAW60938.1| breast cancer 1, early onset, isoform CRA_b [Homo sapiens]
Length = 721
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I ++
Sbjct: 76 STRFSQLVEELLKIICAFQ 94
>gi|119581343|gb|EAW60939.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
gi|119581346|gb|EAW60942.1| breast cancer 1, early onset, isoform CRA_l [Homo sapiens]
Length = 680
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I ++
Sbjct: 76 STRFSQLVEELLKIICAFQ 94
>gi|297701026|ref|XP_002827527.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Pongo abelii]
gi|297701028|ref|XP_002827528.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 3 [Pongo abelii]
Length = 1884
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|12832332|dbj|BAB22061.1| unnamed protein product [Mus musculus]
Length = 233
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKI 125
+ +I L P + + E + EL F ++ + + Q I+K+
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNKPQENG-QDDISKV 114
>gi|449506830|ref|XP_002189161.2| PREDICTED: E3 ubiquitin-protein ligase DTX3L [Taeniopygia guttata]
Length = 295
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
E ++D +CPIC I+ + C H FC+ CID++M CP C T C
Sbjct: 109 EEKEDDECPICRDTIENKEILERCKHAFCKICIDRAMTY-KQACPVCNTVCG 159
>gi|61365365|gb|AAX42696.1| breast cancer 1 early onset [synthetic construct]
Length = 1864
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|30142677|ref|NP_839971.1| E3 ubiquitin-protein ligase TRIM50 [Mus musculus]
gi|56404870|sp|Q810I2.1|TRI50_MOUSE RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465646|gb|AAL91070.1| tripartite motif protein 50 [Mus musculus]
gi|148687424|gb|EDL19371.1| tripartite motif protein 50, isoform CRA_d [Mus musculus]
Length = 483
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACR 71
+ +PE++ +QCPICL + K+ +++C H +C++C+D + ++E CP CR
Sbjct: 5 LTVPELQDQLQCPICLEVFKEP-LMLQCGHSYCKDCLDNLSQHLDSELCCPVCR 57
>gi|343962543|dbj|BAK62859.1| polycomb group RING finger protein 4 [Pan troglodytes]
Length = 326
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVRVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|442749919|gb|JAA67119.1| Putative polycomb group ring finger protein 3 [Ixodes ricinus]
Length = 226
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLE-DNNTCPTC 54
>gi|442749917|gb|JAA67118.1| Putative polycomb group ring finger protein 3 [Ixodes ricinus]
Length = 228
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLE-DNNTCPTC 54
>gi|119581333|gb|EAW60929.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581337|gb|EAW60933.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
gi|119581339|gb|EAW60935.1| breast cancer 1, early onset, isoform CRA_g [Homo sapiens]
Length = 1863
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|75874794|gb|ABA29217.1| breast cancer 1 early onset [Homo sapiens]
Length = 1863
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|61355355|gb|AAX41131.1| breast cancer 1 early onset [synthetic construct]
Length = 1863
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|410266754|gb|JAA21343.1| breast cancer 1, early onset [Pan troglodytes]
Length = 760
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|353441749|gb|AEQ98814.1| breast and ovarian cancer sususceptibility protein 1 [Homo
sapiens]
Length = 1863
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|332260951|ref|XP_003279544.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 1 [Nomascus leucogenys]
gi|441677725|ref|XP_004092761.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1863
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|302633366|gb|ADL59932.1| constitutively photomorphogenic 1 [Brassica napus]
Length = 677
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
P++ KD+ CPIC+ +IK + C H FC CI +R ++CP C H
Sbjct: 45 PDLDKDLLCPICMQVIKDA-FLTACGHSFCYMCIITHLR-NKSDCPCCSQH 93
>gi|296087924|emb|CBI35207.3| unnamed protein product [Vitis vinifera]
Length = 425
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C ++K+ T+ CLH FCR+CI + +L + E CP C C LR D
Sbjct: 17 MTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDEEVDCCPVCNIDLGCVPVDKLRPD 74
Query: 84 PNYDALISALYP 95
N + + ++P
Sbjct: 75 HNLQDIRAKIFP 86
>gi|119581341|gb|EAW60937.1| breast cancer 1, early onset, isoform CRA_k [Homo sapiens]
Length = 1496
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|53794093|gb|AAU93634.1| breast and ovarian cancer susceptibility protein [Homo sapiens]
Length = 1841
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|62858263|ref|NP_001015995.1| BMI1 polycomb ring finger oncogene [Xenopus (Silurana) tropicalis]
gi|163916023|gb|AAI57201.1| hypothetical protein LOC548749 [Xenopus (Silurana) tropicalis]
Length = 325
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRADKTLQDIVYKLVPGLFKGE 90
>gi|6552299|ref|NP_009225.1| breast cancer type 1 susceptibility protein isoform 1 [Homo
sapiens]
gi|728984|sp|P38398.2|BRCA1_HUMAN RecName: Full=Breast cancer type 1 susceptibility protein;
AltName: Full=RING finger protein 53
gi|555932|gb|AAA73985.1| breast and ovarian cancer susceptibility [Homo sapiens]
gi|1698399|gb|AAC37594.1| BRCA1 [Homo sapiens]
gi|30039659|gb|AAP12647.1| breast cancer 1, early onset [Homo sapiens]
gi|75874527|gb|ABA29208.1| breast cancer 1 early onset [Homo sapiens]
gi|75874617|gb|ABA29211.1| breast cancer 1 early onset [Homo sapiens]
gi|75874675|gb|ABA29214.1| breast cancer 1 early onset [Homo sapiens]
gi|75874871|gb|ABA29220.1| breast cancer 1 early onset [Homo sapiens]
gi|75874961|gb|ABA29223.1| breast cancer 1 early onset [Homo sapiens]
gi|75875069|gb|ABA29226.1| breast cancer 1 early onset [Homo sapiens]
gi|168278014|dbj|BAG10985.1| breast cancer type 1 susceptibility protein [synthetic construct]
Length = 1863
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|356557797|ref|XP_003547197.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog
[Glycine max]
Length = 985
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+L + +++ CPIC ++ + + C H FC C+ KSM+ + CP C+ +RR +
Sbjct: 3 DLERMARELICPICWSLLD-SAVSLTCNHLFCNSCVFKSMK-SASACPVCKIP-FTRREV 59
Query: 81 RDDPNYDALISALYPDID 98
R P+ D L+S +Y +++
Sbjct: 60 RPAPHMDNLVS-IYKNME 76
>gi|395749084|ref|XP_003778880.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Pongo abelii]
Length = 1863
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|85701941|ref|NP_001028601.1| tripartite motif-containing protein 75 [Mus musculus]
gi|123788675|sp|Q3UWZ0.1|TRI75_MOUSE RecName: Full=Tripartite motif-containing protein 75
gi|74193642|dbj|BAE22774.1| unnamed protein product [Mus musculus]
gi|148696737|gb|EDL28684.1| mCG59146 [Mus musculus]
gi|187952177|gb|AAI39220.1| Tripartite motif-containing 75 [Mus musculus]
gi|187953157|gb|AAI39222.1| Tripartite motif-containing 75 [Mus musculus]
Length = 467
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG---NNECPACRTHCASRR 78
L ++K+ +CPICL + TV EC H FCR CI K G + CP CR C R
Sbjct: 7 LARLQKETKCPICLDDLTDPVTV-ECGHNFCRSCI-KDFWAGQQATSSCPVCRHQC-QHR 63
Query: 79 SLRDDPNYDALI 90
+LR + +I
Sbjct: 64 NLRSNAQLGNMI 75
>gi|113865841|ref|NP_001038958.1| breast cancer type 1 susceptibility protein homolog [Pan
troglodytes]
gi|37953275|gb|AAR04849.1| BRCA1 [Pan troglodytes]
Length = 1863
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|55976416|sp|Q6J6J0.1|BRCA1_PONPY RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479020|gb|AAT44834.1| breast cancer type 1 [Pongo pygmaeus]
Length = 1863
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|390603078|gb|EIN12470.1| hypothetical protein PUNSTDRAFT_141167 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1053
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 30 QCPICLGIIKKTRTV--MECLHRFCRECIDKSMRLGNNECPACR 71
+C ICL +T + M C H F ++C+DK M+ G N CPACR
Sbjct: 993 RCLICLDDYAETDELRLMTCRHTFHKDCVDKWMQTGRNNCPACR 1036
>gi|348543951|ref|XP_003459445.1| PREDICTED: hypothetical protein LOC100700250 [Oreochromis
niloticus]
Length = 914
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG-NNECPACRTHCASRRSLRDDP 84
+D++CP+CL I + ++ C H FC++C+ + R +ECP C +RRS +D+P
Sbjct: 457 EDLRCPVCLNIFRDP-VILSCSHNFCKQCLKRWWRKKCTHECPFC-----NRRSSKDEP 509
>gi|237681123|ref|NP_009229.2| breast cancer type 1 susceptibility protein isoform 4 [Homo
sapiens]
gi|119581329|gb|EAW60925.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
gi|119581336|gb|EAW60932.1| breast cancer 1, early onset, isoform CRA_d [Homo sapiens]
Length = 759
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|410266746|gb|JAA21339.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266748|gb|JAA21340.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266750|gb|JAA21341.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266752|gb|JAA21342.1| breast cancer 1, early onset [Pan troglodytes]
gi|410266756|gb|JAA21344.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|378755319|gb|EHY65346.1| hypothetical protein NERG_01792 [Nematocida sp. 1 ERTm2]
Length = 275
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 22 LPEIRKDV---QCPICLGIIKKTRTV--MECLHRFCRECIDKSMRLGNNECPACR 71
+PE+ D +CPICL I+K + + C+H F EC+ + + +NECP CR
Sbjct: 208 IPEVSADGSEGECPICLVDIEKEEIIRKLHCMHTFHSECVSEWLTNYSNECPMCR 262
>gi|344283744|ref|XP_003413631.1| PREDICTED: polycomb group RING finger protein 1-like [Loxodonta
africana]
Length = 447
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 222 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQT-SKYCPMCNIKIHET 280
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + EE+ + + R ++ Q S
Sbjct: 281 QPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQPS 327
>gi|340382911|ref|XP_003389961.1| PREDICTED: hypothetical protein LOC100633652 [Amphimedon
queenslandica]
Length = 1138
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+ +P +++CP+CL I+ V C H FC CI++ ++ N CP C+
Sbjct: 177 IAVPHGHVEIECPVCLNILTDPHIVSCCGHNFCGSCIER-VKASNGSCPMCK 227
>gi|313667084|gb|ADR72985.1| COP1 protein [Brassica rapa var. purpuraria]
gi|338224822|gb|AEI89703.1| COP1 protein [Brassica rapa subsp. chinensis]
Length = 676
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD 82
P++ KD+ CPIC+ +IK + C H FC CI ++ ++CP C H +++
Sbjct: 45 PDLDKDLLCPICMQVIKDA-FLTACGHSFCYMCIITHLK-NKSDCPCCSQHLTNKQLY-- 100
Query: 83 DPNY 86
PN+
Sbjct: 101 -PNF 103
>gi|281345779|gb|EFB21363.1| hypothetical protein PANDA_019595 [Ailuropoda melanoleuca]
Length = 796
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G F +F L ++ + QC C ++ + T + C H C++C+D+S R CPACR
Sbjct: 712 GPFQKF----LSKVEEAFQCICCQELVFRPITTV-CQHNVCKDCLDRSFRAQVFSCPACR 766
Query: 72 THCASRRSLRDDPNYDALISALYP 95
+++ + A++S L+P
Sbjct: 767 YDLGRSYAMQVNQRLQAILSQLFP 790
>gi|12003222|gb|AAG43492.1|AF207822_1 BRCA1 [Pan troglodytes]
Length = 1863
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|1498737|gb|AAC00049.1| Brca1-delta11b [Homo sapiens]
Length = 759
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|410210842|gb|JAA02640.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|332260953|ref|XP_003279545.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 2 [Nomascus leucogenys]
gi|441677731|ref|XP_004092762.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Nomascus leucogenys]
Length = 1884
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|109158140|pdb|2H0D|A Chain A, Structure Of A Bmi-1-Ring1b Polycomb Group Ubiquitin
Ligase Complex
Length = 97
Score = 46.2 bits (108), Expect = 0.026, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 3 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 61
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 62 LLNIRSDKTLQDIVYKLVPGLFKNE 86
>gi|74208829|dbj|BAE21174.1| unnamed protein product [Mus musculus]
Length = 281
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 125 LINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 183
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E+E++ +ER
Sbjct: 184 PLYNIRLDRQLQDIVYKLVINLEEREKEQMHDFYKER 220
>gi|38503185|sp|Q9GKK8.2|BRCA1_PANTR RecName: Full=Breast cancer type 1 susceptibility protein homolog
Length = 1863
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|410358541|gb|JAA44608.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|237681119|ref|NP_009231.2| breast cancer type 1 susceptibility protein isoform 2 [Homo
sapiens]
Length = 1884
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|410293720|gb|JAA25460.1| breast cancer 1, early onset [Pan troglodytes]
Length = 1863
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|291245192|ref|XP_002742475.1| PREDICTED: deltex 3-like, partial [Saccoglossus kowalevskii]
Length = 167
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
+D CPIC+ +T + C HRFC+ECID + ++ CP C+
Sbjct: 6 EDNNCPICIDTFTNPKT-LPCKHRFCKECIDHAEKIRGPSCPVCK 49
>gi|242000102|ref|XP_002434694.1| Locus-specific chromosome binding protein, putative [Ixodes
scapularis]
gi|215498024|gb|EEC07518.1| Locus-specific chromosome binding protein, putative [Ixodes
scapularis]
Length = 225
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLE-DNNTCPTC 54
>gi|397485727|ref|XP_003813992.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Pan paniscus]
Length = 1849
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|225453016|ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis
vinifera]
Length = 449
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C ++K+ T+ CLH FCR+CI + +L + E CP C C LR D
Sbjct: 17 MTCPLCNKLLKEATTISLCLHTFCRKCIYE--KLSDEEVDCCPVCNIDLGCVPVDKLRPD 74
Query: 84 PNYDALISALYP 95
N + + ++P
Sbjct: 75 HNLQDIRAKIFP 86
>gi|321455745|gb|EFX66870.1| hypothetical protein DAPPUDRAFT_302409 [Daphnia pulex]
Length = 919
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ ++ + C +C G + T++ECLH FC+ CI + + N CP C +
Sbjct: 7 LQITKLNPHLTCLLCGGYYIEATTIIECLHSFCKSCIVRYLET-NKFCPVCEVQVHKTKP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + ++E
Sbjct: 66 LLNIRSDQTLQDIVYKLVPGLFQHE 90
>gi|119581334|gb|EAW60930.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
gi|119581344|gb|EAW60940.1| breast cancer 1, early onset, isoform CRA_h [Homo sapiens]
Length = 1624
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|432091651|gb|ELK24672.1| Tripartite motif-containing protein 60 [Myotis davidii]
Length = 457
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMR--LGNNECPACRTHCASRRS 79
L E++ + CPICL ++ T+ EC H FC CI + G CPAC HC +
Sbjct: 7 LAELQAEASCPICLDYLRDPVTI-ECGHTFCHSCIHQRWEDLPGTFPCPACLYHCPDKNL 65
Query: 80 LRD 82
R+
Sbjct: 66 KRN 68
>gi|327267492|ref|XP_003218535.1| PREDICTED: polycomb group RING finger protein 6-like [Anolis
carolinensis]
Length = 228
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ L E+ + C IC G T+ ECLH FC+ C+ + +N CP C +
Sbjct: 2 INLSELTPYIMCSICKGYFIDATTITECLHTFCKSCLVRHFYY-SNRCPKCNIVVHQTQP 60
Query: 80 L---RDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQI 118
L R D ++ L +++K E++++ H+ R R +I
Sbjct: 61 LYNIRLDRQLQDIVYKLVLNLEKREKKQM--HDFYRERGLEI 100
>gi|346472247|gb|AEO35968.1| hypothetical protein [Amblyomma maculatum]
Length = 263
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L + + C IC G + TV ECLH FC+ C+ K + NN CP C
Sbjct: 17 IRLKTLNNHIICKICKGYLIDATTVTECLHTFCKSCLVKHLE-DNNTCPTC 66
>gi|242009130|ref|XP_002425345.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
gi|212509130|gb|EEB12607.1| polycomb complex protein bmi-1, putative [Pediculus humanus
corporis]
Length = 886
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 13/100 (13%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++L ++ + C +C G T++ECLH FCR CI K + + CP C +
Sbjct: 10 LKLLDLNPHLMCVLCGGYYIDATTIVECLHSFCRSCIVKHLE-SSKYCPICEVQVHKTKP 68
Query: 80 L---RDDPNYDALISALYPDIDKYEEEELAFHEEERTRNK 116
L R D ++ L P + F E R+R K
Sbjct: 69 LLNIRPDKTLQNIVYKLVPGL---------FANEMRSRRK 99
>gi|196009498|ref|XP_002114614.1| hypothetical protein TRIADDRAFT_28240 [Trichoplax adhaerens]
gi|190582676|gb|EDV22748.1| hypothetical protein TRIADDRAFT_28240 [Trichoplax adhaerens]
Length = 232
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C +C G + TV+ECLH FC+ CI K + NN CP C
Sbjct: 5 LALKELNPCLTCSLCDGYLVNATTVVECLHTFCKSCIVKHLEDSNN-CPKC 54
>gi|119581328|gb|EAW60924.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
gi|119581340|gb|EAW60936.1| breast cancer 1, early onset, isoform CRA_c [Homo sapiens]
Length = 1598
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|296220747|ref|XP_002756439.1| PREDICTED: polycomb group RING finger protein 5 isoform 2
[Callithrix jacchus]
Length = 253
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|37537746|gb|AAQ92977.1| IRIS [Homo sapiens]
Length = 1399
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|356576708|ref|XP_003556472.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
Length = 433
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRT 72
+ V V+ +R + CP+C K T+ CLH FCR+CI + +L + E CP C
Sbjct: 6 QVVKVKRDTLRPCMTCPLCHKFFKDATTISLCLHTFCRKCIYE--KLSDEEMDCCPVCHI 63
Query: 73 H--CASRRSLRDDPNYDALISALYP 95
C LR D N + + ++P
Sbjct: 64 DLGCLPVEKLRPDHNLHDIRAKIFP 88
>gi|348553186|ref|XP_003462408.1| PREDICTED: polycomb group RING finger protein 5-like [Cavia
porcellus]
Length = 255
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|383847579|ref|XP_003699430.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Megachile
rotundata]
Length = 481
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCAS-RRSLRDDPNYDAL 89
C IC + + T + C+H FC CI+ ++ NECP CRT S RSL D D++
Sbjct: 389 CSICSELFVQA-TTLSCMHTFCHHCINSWIK-KRNECPVCRTPVTSMNRSLVLDNFIDSI 446
Query: 90 ISAL 93
I L
Sbjct: 447 IENL 450
>gi|164429832|gb|ABY55292.1| early protein 0 [Suid herpesvirus 1]
Length = 409
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT-------HCASRRSLR 81
+ CPICL + + C+H+FC +CI + L + CP C+T H S S
Sbjct: 44 MDCPICLDVAATEAQTLPCMHKFCLDCIQR-WTLTSTACPLCKTRVTSILHHVDSDASFV 102
Query: 82 DDPNYDALISALYPDIDKYEEEELA 106
+ P A D+D E+E +
Sbjct: 103 ETPVEGAT------DVDGEEDEPVG 121
>gi|403259945|ref|XP_003922452.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403259947|ref|XP_003922453.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 253
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|426348156|ref|XP_004041705.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
[Gorilla gorilla gorilla]
Length = 1399
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|301763803|ref|XP_002917339.1| PREDICTED: polycomb group RING finger protein 5-like [Ailuropoda
melanoleuca]
gi|410975675|ref|XP_003994256.1| PREDICTED: polycomb group RING finger protein 5 [Felis catus]
Length = 256
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|73997984|ref|XP_543923.2| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Canis
lupus familiaris]
Length = 256
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGIQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|351710204|gb|EHB13123.1| Polycomb group RING finger protein 5 [Heterocephalus glaber]
Length = 255
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|322791296|gb|EFZ15813.1| hypothetical protein SINV_04327 [Solenopsis invicta]
Length = 1427
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
L ++ + + C +C G T++ECLH FC+ CI K + N CP C R L
Sbjct: 12 LAKLNEQLICKLCGGYFIDATTIIECLHSFCKSCIVKYLE-NNKYCPICDVQIHKSRPL 69
>gi|260827951|ref|XP_002608927.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
gi|229294281|gb|EEN64937.1| hypothetical protein BRAFLDRAFT_85508 [Branchiostoma floridae]
Length = 217
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+ L ++ + C +C G + T+ ECLH FC+ CI + + NN+CP C+
Sbjct: 6 IRLLDVNPHITCMLCKGYLVDATTITECLHTFCKSCIVQYLE-ENNDCPTCKQVIHQSHP 64
Query: 80 LR---DDPNYDALISALYPDIDKYEEEE 104
L D ++ L P + K EE+
Sbjct: 65 LNYISHDRTMQDIVYKLVPGLQKDGEED 92
>gi|443925001|gb|ELU43935.1| zf-C3HC4 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 560
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
I ++ C ICLG+++ TV+ CLH F ++C+ + N+ CP C+T S R
Sbjct: 40 IDDEISCGICLGVLESPYTVIPCLHTFDKDCLLGWWQR-NDTCPLCKTRATSGR 92
>gi|335773371|gb|AEH58370.1| polycomb group RING finger protein 5-like protein [Equus caballus]
Length = 256
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|114631765|ref|XP_001144756.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
troglodytes]
gi|332834619|ref|XP_003312724.1| PREDICTED: polycomb group RING finger protein 5 [Pan troglodytes]
Length = 256
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|58383116|ref|XP_312405.2| AGAP002533-PA [Anopheles gambiae str. PEST]
gi|55242232|gb|EAA07500.2| AGAP002533-PA [Anopheles gambiae str. PEST]
Length = 222
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
++L + + + C IC G TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNEHITCEICRGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|440897766|gb|ELR49390.1| Polycomb group RING finger protein 5 [Bos grunniens mutus]
Length = 256
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|353336374|gb|AEQ93727.1| recombination activating protein 1, partial [Norops cupreus]
Length = 912
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 16 RFVFVELPE-IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 74
+ + V+ P K + C IC I+ M C H FCR CI K +++ + CPACR C
Sbjct: 242 KILAVDYPSNFVKSISCQICEHILADPVETM-CKHLFCRACIFKCLKVMGSYCPACRYPC 300
Query: 75 ASRRSLRDDPNYDALISAL---YPDIDKYEEEELAFHEEERTRNKQIQ 119
+ ++ +++++L P D EE L + +R+K+I+
Sbjct: 301 FPTDLVSPVKSFLSIMNSLPVICPIKDCQEEVCLGKYSHHLSRHKEIK 348
>gi|348688912|gb|EGZ28726.1| hypothetical protein PHYSODRAFT_322360 [Phytophthora sojae]
Length = 811
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 11 SGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+G EL +++K V C +C +K + +C H FC+ECI+ +++ N +CP C
Sbjct: 738 TGELTDLERFELRDLQKLVNCSVCQDR-RKDVIISKCFHMFCKECIENNLKSRNRKCPTC 796
Query: 71 R 71
+
Sbjct: 797 K 797
>gi|326923721|ref|XP_003208083.1| PREDICTED: polycomb group RING finger protein 5-like [Meleagris
gallopavo]
Length = 326
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 86 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 144
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 145 LEEIIFKLVPGL---REQELQREIEFWKKNK 172
>gi|149757062|ref|XP_001496466.1| PREDICTED: polycomb group RING finger protein 5-like [Equus
caballus]
Length = 256
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|55976414|sp|Q6J6I8.1|BRCA1_GORGO RecName: Full=Breast cancer type 1 susceptibility protein homolog
gi|48479022|gb|AAT44835.1| breast cancer type 1 [Gorilla gorilla]
Length = 1863
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|344274969|ref|XP_003409287.1| PREDICTED: polycomb group RING finger protein 5-like [Loxodonta
africana]
Length = 256
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|42561762|ref|NP_172162.3| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
gi|302595925|sp|Q9M9Y4.2|DRIP1_ARATH RecName: Full=E3 ubiquitin protein ligase DRIP1; AltName:
Full=DREB2A-interacting protein 1
gi|332189912|gb|AEE28033.1| E3 ubiquitin protein ligase DRIP1 [Arabidopsis thaliana]
Length = 421
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 17 FVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCA 75
+ V+ +R + C IC I++ T+ ECLH FCR+CI + + E CP C
Sbjct: 2 MIKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLG 61
Query: 76 SR--RSLRDDPNYDALISALY 94
S LR D N L + ++
Sbjct: 62 STPLEKLRPDHNLQDLRAKIF 82
>gi|417397932|gb|JAA45999.1| Putative polycomb group ring finger protein 5 [Desmodus rotundus]
Length = 256
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELQRESEFWKKNK 102
>gi|348521376|ref|XP_003448202.1| PREDICTED: protein deltex-3-like [Oreochromis niloticus]
Length = 290
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
C IC+G I + T+ +C H FCR C+D++ ++ CP CR + + + P ++I
Sbjct: 107 CSICMGDIVEKTTLEKCGHSFCRSCLDQAFKV-KKACPVCRL--VYGQLIGNQPANGSMI 163
Query: 91 SALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTR 150
PD+ EL HE I S Q R PG D +
Sbjct: 164 VERDPDL------ELPGHEGYGCIC--IIYSFPPGLQSPEHPNPGVRYPGTDRVAYLPDS 215
Query: 151 PQRNPRTAHLRRRRNSR 167
P+ N LRR R
Sbjct: 216 PEGNRVLGLLRRAFEQR 232
>gi|332260959|ref|XP_003279548.1| PREDICTED: breast cancer type 1 susceptibility protein homolog
isoform 5 [Nomascus leucogenys]
Length = 699
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISAL 93
+ L+ L
Sbjct: 76 STRFSQLVEEL 86
>gi|217039772|gb|ACJ76976.1| early protein 0 [Suid herpesvirus 1]
Length = 409
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT-------HCASRRSLR 81
+ CPICL + + C+H+FC +CI + L + CP C+T H S S
Sbjct: 44 MDCPICLDVAATEAQTLPCMHKFCLDCIQR-WTLTSTACPLCKTRVTSILHHVDSDASFV 102
Query: 82 DDPNYDALISALYPDIDKYEEEEL 105
+ P A D+D E+E +
Sbjct: 103 ETPVEGAT------DVDGEEDEPV 120
>gi|159484118|ref|XP_001700107.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272603|gb|EDO98401.1| predicted protein [Chlamydomonas reinhardtii]
Length = 410
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL-GNNECPACRTHCASRRSLRD 82
E+ K ++CPICL I+ + + CLH FC CI +++ G CP CR RS R
Sbjct: 14 ELGKTLRCPICLNIMDQPAR-LPCLHYFCWGCITHNVKPRGEVVCPVCRA-----RSNRR 67
Query: 83 DPNYDALISALYPDIDKYEEEELAF 107
D D+L++ +Y + E A
Sbjct: 68 DIQEDSLLATF---TQRYGQIEAAL 89
>gi|311271618|ref|XP_003133191.1| PREDICTED: polycomb group RING finger protein 5-like [Sus scrofa]
Length = 256
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|193788616|ref|NP_001123354.1| polycomb group RING finger protein 5 [Rattus norvegicus]
gi|187469199|gb|AAI67067.1| Pcgf5 protein [Rattus norvegicus]
Length = 236
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE-EEELAFHEEER 112
+ +I L P + + E + EL F ++ +
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNK 102
>gi|426252775|ref|XP_004020078.1| PREDICTED: polycomb group RING finger protein 5 [Ovis aries]
Length = 256
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|402880924|ref|XP_003904036.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Papio
anubis]
gi|402880926|ref|XP_003904037.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Papio
anubis]
gi|355782955|gb|EHH64876.1| hypothetical protein EGM_18205 [Macaca fascicularis]
gi|380784417|gb|AFE64084.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784419|gb|AFE64085.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784421|gb|AFE64086.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|380784423|gb|AFE64087.1| polycomb group RING finger protein 5 [Macaca mulatta]
gi|383413563|gb|AFH29995.1| polycomb group RING finger protein 5 [Macaca mulatta]
Length = 256
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|431919132|gb|ELK17884.1| 52 kDa Ro protein [Pteropus alecto]
Length = 471
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L + ++V CPICL + ++ EC H FC ECI + + G N CP CR
Sbjct: 7 LAMMWEEVTCPICLDPTVEPVSI-ECGHSFCHECISQVGKDGGNYCPVCR 55
>gi|33300663|ref|NP_115749.2| polycomb group RING finger protein 5 [Homo sapiens]
gi|375065846|ref|NP_001243478.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|380036033|ref|NP_001244030.1| polycomb group RING finger protein 5 [Homo sapiens]
gi|297686995|ref|XP_002821014.1| PREDICTED: polycomb group RING finger protein 5 [Pongo abelii]
gi|332212309|ref|XP_003255263.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Nomascus
leucogenys]
gi|426365544|ref|XP_004049831.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Gorilla
gorilla gorilla]
gi|426365546|ref|XP_004049832.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Gorilla
gorilla gorilla]
gi|441600613|ref|XP_004087624.1| PREDICTED: polycomb group RING finger protein 5 [Nomascus
leucogenys]
gi|74750353|sp|Q86SE9.1|PCGF5_HUMAN RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|30353997|gb|AAH51845.1| PCGF5 protein [Homo sapiens]
gi|30722356|emb|CAD91165.1| hypothetical protein [Homo sapiens]
gi|117646070|emb|CAL38502.1| hypothetical protein [synthetic construct]
gi|119570497|gb|EAW50112.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|119570498|gb|EAW50113.1| polycomb group ring finger 5, isoform CRA_a [Homo sapiens]
gi|221044402|dbj|BAH13878.1| unnamed protein product [Homo sapiens]
gi|261859692|dbj|BAI46368.1| polycomb group ring finger 5 [synthetic construct]
Length = 256
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|301788009|ref|XP_002929418.1| PREDICTED: e3 ubiquitin-protein ligase UHRF1-like [Ailuropoda
melanoleuca]
Length = 791
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ + QC C ++ + T + C H C++C+D+S R CPACR +++
Sbjct: 713 LSKVEEAFQCICCQELVFRPITTV-CQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQ 771
Query: 82 DDPNYDALISALYP 95
+ A++S L+P
Sbjct: 772 VNQRLQAILSQLFP 785
>gi|440795518|gb|ELR16638.1| zinc finger, C3HC4 type (RING finger) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 914
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
E+ +RK ++CP+C +K T + C H FC C+ ++L N +CP C
Sbjct: 842 EVSTLRKMLRCPVCNDNMKDT-VITRCFHVFCNPCVKSRLQLRNRKCPGC 890
>gi|10444421|gb|AAG17904.1|AF298586_1 early protein EPO [Pseudorabies virus Ea]
Length = 409
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT-------HCASRRSLR 81
+ CPICL + + C+H+FC +CI + L + CP C+T H S S
Sbjct: 44 MDCPICLDVAATEAQTLPCMHKFCLDCIQR-WTLTSTACPLCKTRVTSILHHVDSDASFV 102
Query: 82 DDPNYDALISALYPDIDKYEEEELA 106
+ P A D+D E+E +
Sbjct: 103 ETPVEGAT------DVDGEEDEPVG 121
>gi|224123440|ref|XP_002319079.1| predicted protein [Populus trichocarpa]
gi|222857455|gb|EEE95002.1| predicted protein [Populus trichocarpa]
Length = 430
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE---CPACRTH--CASRRSLRDD 83
+ CP+C ++K+ T+ CLH FCR+CI + +L + E CP C C LR D
Sbjct: 17 MTCPLCNKLLKEATTISLCLHSFCRKCIYE--KLSDEEVDCCPVCNIDLGCLPVEKLRPD 74
Query: 84 PNYDALISALYP 95
N + + ++P
Sbjct: 75 HNLQDIRAKVFP 86
>gi|123794666|sp|Q3UK78.1|PCGF5_MOUSE RecName: Full=Polycomb group RING finger protein 5; AltName:
Full=RING finger protein 159
gi|74222234|dbj|BAE26924.1| unnamed protein product [Mus musculus]
gi|219519442|gb|AAI45591.1| Pcgf5 protein [Mus musculus]
Length = 256
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKI 125
+ +I L P + + E + EL F ++ + + Q I+K+
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNKPQENG-QDDISKV 114
>gi|397510020|ref|XP_003825403.1| PREDICTED: polycomb group RING finger protein 5 isoform 1 [Pan
paniscus]
gi|397510022|ref|XP_003825404.1| PREDICTED: polycomb group RING finger protein 5 isoform 2 [Pan
paniscus]
gi|410226392|gb|JAA10415.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258158|gb|JAA17046.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258160|gb|JAA17047.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258162|gb|JAA17048.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258164|gb|JAA17049.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258166|gb|JAA17050.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410258168|gb|JAA17051.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410304080|gb|JAA30640.1| polycomb group ring finger 5 [Pan troglodytes]
gi|410338739|gb|JAA38316.1| polycomb group ring finger 5 [Pan troglodytes]
Length = 256
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|126272969|ref|XP_001367374.1| PREDICTED: polycomb group RING finger protein 5-like [Monodelphis
domestica]
Length = 255
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERETEFWKKNK 102
>gi|432904422|ref|XP_004077323.1| PREDICTED: polycomb group RING finger protein 5-A-like [Oryzias
latipes]
Length = 247
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C +C G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 17 ITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFE-ESNDCPKCGIQVHETNPLEMLRLDNT 75
Query: 86 YDALISALYPDIDKYEEEE 104
+ +I L P + + EE++
Sbjct: 76 LEEIIFKLVPGLRENEEKQ 94
>gi|148225863|ref|NP_001088007.1| polycomb complex protein BMI-1-B [Xenopus laevis]
gi|82198007|sp|Q640D5.1|BMI1B_XENLA RecName: Full=Polycomb complex protein BMI-1-B; AltName:
Full=Polycomb group RING finger protein 4-B
gi|52138943|gb|AAH82694.1| LOC494698 protein [Xenopus laevis]
Length = 323
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDAATIIECLHSFCKTCIVRYLET-SKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRADKTLQDIVYKLVPGLFKGE 90
>gi|355709615|gb|AES03651.1| polycomb group ring finger 5 [Mustela putorius furo]
Length = 108
Score = 45.8 bits (107), Expect = 0.034, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS---LRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|341877844|gb|EGT33779.1| hypothetical protein CAEBREN_12747 [Caenorhabditis brenneri]
Length = 385
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRD-D 83
+ + V+C IC+ ++ + CLH FC CI K N +CP CR S++D
Sbjct: 23 LARHVECCICMAVLHNAASCTPCLHTFCIGCIAKWNETNNGKCPMCRV------SVKDVS 76
Query: 84 PNY---DALISALY--PDIDKYEEEE 104
PN+ D + S L P + + EEE+
Sbjct: 77 PNWVMRDLVNSYLQMKPALQRTEEEK 102
>gi|281338533|gb|EFB14117.1| hypothetical protein PANDA_005532 [Ailuropoda melanoleuca]
Length = 224
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|344244641|gb|EGW00745.1| Polycomb group RING finger protein 5 [Cricetulus griseus]
Length = 256
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE-EEELAFHEEERTRNKQIQASIAKI 125
+ +I L P + + E + EL F ++ + + Q I+K+
Sbjct: 75 LEEIIFKLVPGLREQELQRELEFWKKNKPQENG-QDDISKV 114
>gi|237681125|ref|NP_009230.2| breast cancer type 1 susceptibility protein isoform 5 [Homo
sapiens]
gi|47939870|gb|AAH72418.1| BRCA1 protein [Homo sapiens]
Length = 699
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQE 75
Query: 83 DPNYDALISALYPDIDKYE 101
+ L+ L I ++
Sbjct: 76 STRFSQLVEELLKIICAFQ 94
>gi|343781183|pdb|3RPG|B Chain B, Bmi1RING1B-Ubch5c Complex Structure
Length = 117
Score = 45.8 bits (107), Expect = 0.035, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
R +++ E+ + C +C G T++ECLH FC+ CI + + + CP C
Sbjct: 3 RTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 76 SRRSL---RDDPNYDALISALYPDIDKYE 101
R L R D ++ L P + K E
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|291404424|ref|XP_002718426.1| PREDICTED: polycomb group ring finger 5 [Oryctolagus cuniculus]
Length = 278
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELERESEFWKKNK 102
>gi|47206993|emb|CAF92401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 172
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
+ CPICL + K ++ C H FC EC+ +++ + CP CR
Sbjct: 38 VESQFSCPICLEVYHKPVSIASCAHTFCGECLQPCLQVTSPLCPLCRV 85
>gi|357116250|ref|XP_003559895.1| PREDICTED: putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 3-like 1-like [Brachypodium distachyon]
Length = 828
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
D CPICL KT + C H +C+ CI K ++ ++ CP CR H S+ L P
Sbjct: 571 DFDCPICLSPPSKT-VITSCTHIYCQTCILKILKSSSSRCPICR-HALSKEDLFIAP 625
>gi|317419829|emb|CBN81865.1| Polycomb complex protein BMI-1-A [Dicentrarchus labrax]
Length = 333
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLET-SKYCPICDVQVHKTKP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|126273453|ref|XP_001378665.1| PREDICTED: polycomb group RING finger protein 6-like [Monodelphis
domestica]
Length = 425
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 197 MISLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 255
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 256 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 292
>gi|28558788|gb|AAO45759.1| RING zinc finger protein-like protein [Cucumis melo subsp. melo]
Length = 210
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECI---------DKSMRLGNNECPACRTHCASRRSLR 81
CPICLG I ++ + +C H FC CI +S RL + +CP C+ + ++ L+
Sbjct: 16 CPICLGPINQSSYLDKCFHNFCYNCIVQWTKVVSGKRSCRLSSIKCPLCKRYWKLQKYLQ 75
Query: 82 DDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGK 141
+ + + + + E+ ++ H N + + K +Q ++ L ++R
Sbjct: 76 ANQWLEVWLKRELQALIQEEDVDIIMHHFVGLINSFFRRNEPK-YQTETPELKRKRFSQT 134
Query: 142 --DTASPFMT 149
D A PF++
Sbjct: 135 ILDAAKPFLS 144
>gi|341884152|gb|EGT40087.1| hypothetical protein CAEBREN_01001 [Caenorhabditis brenneri]
Length = 561
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS---LRDDPN 85
+ C IC G I T+++C+H FC+ C+ N CP C T + D
Sbjct: 339 ITCSICDGYIVDATTIIDCMHTFCKSCLLSYFDNDNRTCPTCGTFIHGSHPTHYVTYDRA 398
Query: 86 YDALISALYPDIDKYEEE 103
+ L++ P ++K E E
Sbjct: 399 VNELVNQFVPKLEKKEME 416
>gi|118151048|ref|NP_001071448.1| polycomb group RING finger protein 5 [Bos taurus]
gi|126253669|sp|A0JN86.1|PCGF5_BOVIN RecName: Full=Polycomb group RING finger protein 5
gi|117306237|gb|AAI26566.1| Polycomb group ring finger 5 [Bos taurus]
gi|296472843|tpg|DAA14958.1| TPA: polycomb group RING finger protein 5 [Bos taurus]
Length = 255
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEER 112
+ +I L P + + E E F ++ +
Sbjct: 75 LEEIIFKLVPGLREQLERESEFWKKNK 101
>gi|444723342|gb|ELW63999.1| Polycomb group RING finger protein 1 [Tupaia chinensis]
Length = 456
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNIKIHET 80
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + EE+ + + R ++ Q S
Sbjct: 81 QPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQPS 127
>gi|176866361|ref|NP_001116534.1| uncharacterized protein LOC100144568 [Danio rerio]
Length = 441
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 27 KDVQCPICLGIIK--KTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
KD CPICL IK ++ + +C HRFC++C+D + +L CP C
Sbjct: 255 KDETCPICLETIKMPESTVLTKCQHRFCKDCLDTAFQL-KPACPIC 299
>gi|109157341|pdb|2CKL|A Chain A, Ring1b-Bmi1 E3 Catalytic Domain Structure
Length = 108
Score = 45.8 bits (107), Expect = 0.036, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 16 RFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
R +++ E+ + C +C G T++ECLH FC+ CI + + + CP C
Sbjct: 3 RTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET-SKYCPICDVQVH 61
Query: 76 SRRSL---RDDPNYDALISALYPDIDKYE 101
R L R D ++ L P + K E
Sbjct: 62 KTRPLLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|328697154|ref|XP_003240251.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like isoform 2
[Acyrthosiphon pisum]
Length = 326
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
I D+QC +C I K TV+ C H FC CI + N +CP CR H S+
Sbjct: 128 IDNDLQCNVCFEIFIKP-TVLNCSHTFCESCIHVWTK-RNKKCPICRVHIKSK 178
>gi|321455673|gb|EFX66800.1| hypothetical protein DAPPUDRAFT_218894 [Daphnia pulex]
Length = 225
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
++L + + C IC G + TV ECLH FC+ C+ K + NN CP+C
Sbjct: 5 IKLRSLNSHIICKICGGYLIDATTVTECLHTFCKSCLVKHLE-ENNTCPSCNIMIHQSHP 63
Query: 80 LRD---DPNYDALISALYPDIDKYE---EEELAF 107
L+ D ++ L PD+ E E++ F
Sbjct: 64 LQYISFDRTMQDIVYKLVPDLQDNETKREKDFYF 97
>gi|302688461|ref|XP_003033910.1| hypothetical protein SCHCODRAFT_81737 [Schizophyllum commune H4-8]
gi|300107605|gb|EFI99007.1| hypothetical protein SCHCODRAFT_81737 [Schizophyllum commune H4-8]
Length = 482
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
E+ D+QC C ++ V+ C H FC C+ + ++ G CPACR+ S R
Sbjct: 68 ELALDLQCGCCSDLVINPVIVLPCQHFFCGSCVVQWIKNGGTNCPACRSVSTSVAPFR-- 125
Query: 84 PNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDT 143
A++ L L E+ +++Q + A I+++ S R P T
Sbjct: 126 -TMSAVVDTL-----------LRIAPEKARPEREVQQADA-IYRKGS----NLRIPVPRT 168
Query: 144 ASPFMTRPQRNPRTAHLR 161
ASP P NP T R
Sbjct: 169 ASP---EPNLNPSTDFAR 183
>gi|357115770|ref|XP_003559659.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Brachypodium
distachyon]
Length = 502
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE----CPACRTH--CASRRSLRD 82
+ CP+C +++ T+ ECLH FCR CI + N+E CP C+ C LR
Sbjct: 98 MTCPLCNRLLRDATTISECLHTFCRRCIYQKF---NDEEVESCPVCKIDLGCTPVEKLRA 154
Query: 83 DPNYDALISALYP-DIDKYEEEELA--FHEEERTRNKQIQASIAKIFQRQSEALVKRRT 138
D + + S ++P K + E++A + + + I + + + L RRT
Sbjct: 155 DHSLHDVRSKIFPFKRKKIKAEDVATPISLPSKRKERSISSLVVPTPKLAPTGLTGRRT 213
>gi|354477523|ref|XP_003500969.1| PREDICTED: E3 ubiquitin-protein ligase RFWD2-like [Cricetulus
griseus]
Length = 812
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
D CPIC +I++ + +C H FC +CI +S+ NN CP C
Sbjct: 213 DFVCPICFDMIEEAY-MTKCGHSFCYKCIHQSLEDNNNRCPKC 254
>gi|341893341|gb|EGT49276.1| hypothetical protein CAEBREN_01245 [Caenorhabditis brenneri]
Length = 562
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS---LRDDPN 85
+ C IC G I T+++C+H FC+ C+ N CP C T + D
Sbjct: 340 ITCSICDGYIVDATTIIDCMHTFCKSCLLSYFDNDNRTCPTCGTFIHGSHPTHYVTYDRA 399
Query: 86 YDALISALYPDIDKYEEE 103
+ L++ P ++K E E
Sbjct: 400 VNELVNQFVPKLEKKEME 417
>gi|297687308|ref|XP_002821159.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Pongo
abelii]
Length = 350
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 180
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 217
>gi|403262120|ref|XP_003923443.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Saimiri
boliviensis boliviensis]
Length = 475
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L + ++V CPICL + ++ EC H FC+ECI + R G CP CR
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISEVGRNGGGVCPVCR 55
>gi|328697152|ref|XP_001946078.2| PREDICTED: e3 ubiquitin-protein ligase RNF8-like isoform 3
[Acyrthosiphon pisum]
Length = 378
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
I D+QC +C I K TV+ C H FC CI + N +CP CR H S+
Sbjct: 180 IDNDLQCNVCFEIFIKP-TVLNCSHTFCESCIHVWTK-RNKKCPICRVHIKSK 230
>gi|118401967|ref|XP_001033303.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila]
gi|89287651|gb|EAR85640.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila SB210]
Length = 1040
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCA 75
C +CL IK ++ CLH FC C+++S++ N++CP CR H +
Sbjct: 760 CSVCLEDIK-YHSISSCLHVFCSSCLEQSIQ-TNHKCPLCRKHLS 802
>gi|193652775|ref|XP_001943872.1| PREDICTED: hypothetical protein LOC100159350 [Acyrthosiphon pisum]
Length = 354
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDP 84
+ D+QC IC + K TV+ C H FC ECI+ R N+ CP CR + ++
Sbjct: 160 LESDLQCNICYEMFIKP-TVLNCSHTFCHECIESWTRRVNH-CPTCRVYVKNKSYCLTLD 217
Query: 85 NYDALISALYPDIDKYEEEELAFHEEERTRNK 116
Y I+ PD K E L ER N+
Sbjct: 218 TYLDKIADCLPDEIKTRRETLKV---ERNNNR 246
>gi|260827817|ref|XP_002608860.1| hypothetical protein BRAFLDRAFT_241590 [Branchiostoma floridae]
gi|229294214|gb|EEN64870.1| hypothetical protein BRAFLDRAFT_241590 [Branchiostoma floridae]
Length = 198
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
+D C ICL K +T+ +C H+FC +C+D++++ ++CP C+T
Sbjct: 13 QDETCAICLDDFKFPKTLPQCKHKFCGDCLDRALKAA-SQCPICKT 57
>gi|344255690|gb|EGW11794.1| Polycomb group RING finger protein 1 [Cricetulus griseus]
Length = 512
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 22 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNIKIHET 80
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + EE+ + + R ++ Q S
Sbjct: 81 QPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQPS 127
>gi|357624741|gb|EHJ75399.1| hypothetical protein KGM_03599 [Danaus plexippus]
Length = 310
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
++L + + C IC G TV ECLH FC+ C+ K + NN CP C
Sbjct: 5 IKLKTLNSHITCKICRGYFIDATTVTECLHTFCKSCLVKHLE-ENNTCPTC 54
>gi|238493187|ref|XP_002377830.1| RING finger protein [Aspergillus flavus NRRL3357]
gi|220696324|gb|EED52666.1| RING finger protein [Aspergillus flavus NRRL3357]
Length = 835
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 24 EIRKDVQCPICLG---IIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+I +C ICLG ++ R + +C H F R+CID+ + G N CP CR + S
Sbjct: 765 QIPNGDRCLICLGDYEAAEELRQLTKCAHVFHRDCIDQWLTTGRNSCPLCRGQGVAETSN 824
Query: 81 RD 82
D
Sbjct: 825 AD 826
>gi|390371119|dbj|GAB65000.1| hypothetical protein PCYB_042020 [Plasmodium cynomolgi strain B]
Length = 296
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM-RLGNNECPACRTHCA-SRRSL 80
P + CPICL +I T+ C H FC C+ ++ + + CP+CRT R S
Sbjct: 164 PVTSEKYTCPICLCLIHDPVTLNSCFHSFCWNCLATAIQKYSIDNCPSCRTKIVYDRDSF 223
Query: 81 RDDP--NYDALISALYPDIDKYEEEELA 106
+ D +D ++ L IDK E E++
Sbjct: 224 KIDGILYFDDYLTVL-NSIDKNEMEDMG 250
>gi|354500950|ref|XP_003512559.1| PREDICTED: E3 ubiquitin-protein ligase DTX3L-like [Cricetulus
griseus]
Length = 681
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
C IC+ +I R + +C H FC CI K+M L CP C+T +R + D
Sbjct: 552 CVICMNVISNKRVLSKCKHEFCTSCITKAMSL-KPVCPVCQTSYGIQRGNQPD 603
>gi|317157009|ref|XP_001826162.2| RING finger protein [Aspergillus oryzae RIB40]
gi|391864927|gb|EIT74219.1| putative E3 ubiquitin ligase [Aspergillus oryzae 3.042]
Length = 835
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 24 EIRKDVQCPICLG---IIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+I +C ICLG ++ R + +C H F R+CID+ + G N CP CR + S
Sbjct: 765 QIPNGDRCLICLGDYEAAEELRQLTKCAHVFHRDCIDQWLTTGRNSCPLCRGQGVAETSN 824
Query: 81 RD 82
D
Sbjct: 825 AD 826
>gi|392566331|gb|EIW59507.1| hypothetical protein TRAVEDRAFT_58308 [Trametes versicolor
FP-101664 SS1]
Length = 526
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
+ +++QC C I+ + V C H FC C+ +R G CPACRT
Sbjct: 83 LEEELQCGCCSAIVYRPVVVAPCQHFFCGSCVILWIRNGGTSCPACRT 130
>gi|148226666|ref|NP_001081790.1| polycomb complex protein BMI-1-A [Xenopus laevis]
gi|49115061|gb|AAH72892.1| Xbmi-1 protein [Xenopus laevis]
Length = 326
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRADKTLQDIVYKLVPGLFKGE 90
>gi|335310264|ref|XP_003361952.1| PREDICTED: polycomb group RING finger protein 1-like [Sus scrofa]
Length = 262
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 12 GFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
G F V V++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 63 GDFQEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMCN 121
Query: 72 THCASRR---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + EE+ + + R ++ Q S
Sbjct: 122 IKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRITQPS 174
>gi|13537206|dbj|BAB40779.1| hMBLR [Homo sapiens]
gi|16307386|gb|AAH10235.1| Polycomb group ring finger 6 [Homo sapiens]
gi|167773431|gb|ABZ92150.1| polycomb group ring finger 6 [synthetic construct]
gi|167774201|gb|ABZ92535.1| polycomb group ring finger 6 [synthetic construct]
Length = 352
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 124 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 182
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 183 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 219
>gi|58761530|ref|NP_001011663.1| polycomb group RING finger protein 6 isoform a [Homo sapiens]
gi|116242703|sp|Q9BYE7.2|PCGF6_HUMAN RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|119570033|gb|EAW49648.1| polycomb group ring finger 6, isoform CRA_b [Homo sapiens]
gi|306921473|dbj|BAJ17816.1| polycomb group ring finger 6 [synthetic construct]
Length = 350
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 180
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 217
>gi|390338415|ref|XP_003724773.1| PREDICTED: uncharacterized protein LOC100891735, partial
[Strongylocentrotus purpuratus]
Length = 627
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 23 PEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-----CPACR--THCA 75
P K++ CP+CLGI + + C H FCR+C+ K+ L + + CP CR T +
Sbjct: 11 PSSSKNLTCPLCLGIFDEATILTSCGHTFCRKCL-KNYDLSHQDLDHMICPLCRKITKLS 69
Query: 76 SRRSLRDDPNYDALISALYPD 96
++R DD + ++AL D
Sbjct: 70 AKRV--DDFLTNVTVNALVDD 88
>gi|114632654|ref|XP_508012.2| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Pan
troglodytes]
gi|410212244|gb|JAA03341.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410259878|gb|JAA17905.1| polycomb group ring finger 6 [Pan troglodytes]
gi|410331781|gb|JAA34837.1| polycomb group ring finger 6 [Pan troglodytes]
Length = 350
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 180
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 217
>gi|66822167|ref|XP_644438.1| hypothetical protein DDB_G0273643 [Dictyostelium discoideum AX4]
gi|66822915|ref|XP_644812.1| hypothetical protein DDB_G0273381 [Dictyostelium discoideum AX4]
gi|60472561|gb|EAL70512.1| hypothetical protein DDB_G0273643 [Dictyostelium discoideum AX4]
gi|60472959|gb|EAL70908.1| hypothetical protein DDB_G0273381 [Dictyostelium discoideum AX4]
Length = 1364
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 20 VELPEIRKDV-QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E +D+ +C ICL K R C FC ECID+ + + N CPACR S
Sbjct: 18 ISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWI-ISNPTCPACRDTLTS-- 74
Query: 79 SLRDDPNYDALISALYPDIDKYEEEELA------FHEEER 112
D+ N + ++S + ++ K E+EE +H ER
Sbjct: 75 ---DNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYER 111
>gi|50749508|ref|XP_421668.1| PREDICTED: polycomb group RING finger protein 5 [Gallus gallus]
Length = 256
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELQREIEFWKKNK 102
>gi|158254794|dbj|BAF83368.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 180
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 217
>gi|410900398|ref|XP_003963683.1| PREDICTED: RING finger protein 166-like [Takifugu rubripes]
Length = 250
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
I CPICL + K ++ C H FC EC+ +++ + CP CR
Sbjct: 40 IESQFSCPICLEVYHKPVSIASCAHTFCGECLQPCLQVTSPLCPLCRV 87
>gi|345321591|ref|XP_001521257.2| PREDICTED: zinc-binding protein A33-like [Ornithorhynchus anatinus]
Length = 422
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGN--NECPACRTHCASRRSLRD 82
+R+++ C IC + + ++ECLH FC+ECI + CP CR SR R
Sbjct: 10 LREELTCAICCDLFTEP-VMLECLHHFCKECIQRYWASCPRVTSCPQCRRELPSRAFRR- 67
Query: 83 DPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRR 137
D L+S + + K E E +R KQ++ ++ + QR+ E +K +
Sbjct: 68 ----DLLVSGVVEKVKKCSVE-----ERKRESQKQLEEAL-QFHQREKENCLKMK 112
>gi|311269921|ref|XP_003132689.1| PREDICTED: E3 ubiquitin-protein ligase DTX3L-like [Sus scrofa]
Length = 613
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 27 KDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNY 86
KD+ C IC+ I+ + + +C H FC CI+K++ CP C+T ++ + P+
Sbjct: 431 KDI-CSICMDIMSNKKVLSKCKHEFCSPCINKALSY-KPVCPVCQTSYGVQKG--NQPDG 486
Query: 87 DALISALYPDIDKYE 101
D ++ L + YE
Sbjct: 487 DMYVTVLRDSLPGYE 501
>gi|326678855|ref|XP_003201191.1| PREDICTED: tripartite motif-containing protein 35-like [Danio
rerio]
Length = 450
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 84
D+ CP+C I K T ++ C H FC+EC+ + N ECP CR RRS +D P
Sbjct: 8 DLTCPVCQDIFK-TPVLLSCSHSFCKECLQQFWISKNTQECPVCR-----RRSSKDYP 59
>gi|192758094|gb|ACF04974.1| recombination activating protein 1 [Enyalioides heterolepis]
Length = 358
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 16 RFVFVELP-EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 74
+ + V+ P + K + C IC I+ M C H FCR CI K +++ + CPACR C
Sbjct: 193 KILAVDYPVDFVKSISCQICEHILADPVETM-CKHLFCRACILKCLKVMGSYCPACRYPC 251
Query: 75 ASRRSLRDDPNYDALISAL---YPDIDKYEEEELAFHEEERTRNKQIQASIAKIF 126
+ ++ +++++L P D EE L + +R+K+++ +F
Sbjct: 252 FPTDLVSPVKSFLSILNSLPVRCPVKDCQEEVCLGKYCHHLSRHKEVEDKEGYVF 306
>gi|116283824|gb|AAH30969.1| BRCA1 protein [Homo sapiens]
Length = 657
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI-TKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|296217197|ref|XP_002754899.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Callithrix
jacchus]
Length = 475
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L + ++V CPICL + ++ EC H FC+ECI + R G CP CR
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISEVGRNGGGVCPVCR 55
>gi|148232784|ref|NP_001082838.1| polycomb group RING finger protein 6 [Danio rerio]
gi|141796360|gb|AAI39555.1| Si:ch211-67n3.7 protein [Danio rerio]
Length = 277
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL---RDDPN 85
++C +C G T+ ECLH FC+ CI K +N CP C + L R D
Sbjct: 58 IRCALCNGFFIDATTITECLHTFCKSCIVKHF-FYSNRCPNCSIVVHQTQPLYCIRPDRQ 116
Query: 86 YDALISALYPDIDKYEEEEL-AFHEEERTRNKQIQASIA-------KIFQRQSEALV 134
++ + P +++ E + AF+ R R ++ +A K+ QRQ + LV
Sbjct: 117 LQDIVFKMVPYLEEDERSRICAFY---RLRGLEVPKPVASPAAYPVKLPQRQKKDLV 170
>gi|301786406|ref|XP_002928629.1| PREDICTED: 52 kDa Ro protein-like [Ailuropoda melanoleuca]
Length = 469
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + ++V CPICL + + ++ +C H FC ECI + + G + CP C+ H R+LR
Sbjct: 7 LAMMWEEVTCPICLDPMVEPMSI-DCGHSFCHECISEVGKDGGSVCPVCK-HNFLLRNLR 64
Query: 82 DDPNY 86
PN+
Sbjct: 65 --PNW 67
>gi|113675578|ref|NP_001038700.1| polycomb group RING finger protein 5-B [Danio rerio]
gi|123887311|sp|Q1JPS1.1|PCF5B_DANRE RecName: Full=Polycomb group RING finger protein 5-B
gi|94574392|gb|AAI16620.1| Zgc:136815 [Danio rerio]
Length = 232
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C +C G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFE-DSNDCPKCGIQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQ 117
+ +I L P + + E+++ E+E R K+
Sbjct: 75 LEEVIFKLVPGLREKEQQQ----EDEFWRRKE 102
>gi|432104724|gb|ELK31277.1| E3 ubiquitin-protein ligase TRIM21 [Myotis davidii]
Length = 529
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L + ++V CPICL + ++ EC H FC ECI + + G CP CR
Sbjct: 66 LAMMWEEVTCPICLDPTVEPVSI-ECGHSFCHECISQVAKAGGGTCPVCR 114
>gi|30842804|ref|NP_851594.1| E3 ubiquitin-protein ligase TRIM50 [Rattus norvegicus]
gi|56404685|sp|Q810I1.1|TRI50_RAT RecName: Full=E3 ubiquitin-protein ligase TRIM50; AltName:
Full=Tripartite motif-containing protein 50
gi|29465652|gb|AAL91073.1| tripartite motif protein 50 [Rattus norvegicus]
gi|149063050|gb|EDM13373.1| tripartite motif protein 50, isoform CRA_b [Rattus norvegicus]
Length = 483
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACR 71
+ +PE++ +QCPICL + K+ +++C H +C+ C+D ++E CP CR
Sbjct: 5 LTVPELQDQLQCPICLEVFKEP-LMLQCGHSYCKNCLDSLSEHLDSELRCPVCR 57
>gi|414887861|tpg|DAA63875.1| TPA: hypothetical protein ZEAMMB73_072475 [Zea mays]
Length = 824
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYD 87
D CPICL KT + C H +C+ CI K ++ ++ CP C RR+L + +
Sbjct: 573 DFDCPICLSPPTKT-VITSCTHIYCQTCILKILKSSSSRCPIC------RRTLSKEDLF- 624
Query: 88 ALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSE 131
L P++ +E+ E +R + ++QA + + Q+E
Sbjct: 625 -----LAPEVKHPDEDGSGNLESDRPLSSKVQALLKLLTASQNE 663
>gi|405970129|gb|EKC35061.1| Polycomb complex protein BMI-1-B [Crassostrea gigas]
Length = 239
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+ ++L E+ + C +C G + + T+ EC+H FC+ CI + CP C T
Sbjct: 53 IVLQLRELNPYITCALCGGYLYEASTITECMHTFCKTCIVRYTERSLT-CPTCDTPIHPT 111
Query: 78 ---RSLRDDPNYDALISALYPDIDKYEEE-ELAFHE 109
+R D ++ L P + + E++ E+ F+E
Sbjct: 112 DPFVHIRHDSTLQDIVYRLLPKVAEVEQKREIEFYE 147
>gi|281343983|gb|EFB19567.1| hypothetical protein PANDA_018608 [Ailuropoda melanoleuca]
Length = 473
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L + ++V CPICL + + ++ +C H FC ECI + + G + CP C+ H R+LR
Sbjct: 7 LAMMWEEVTCPICLDPMVEPMSI-DCGHSFCHECISEVGKDGGSVCPVCK-HNFLLRNLR 64
Query: 82 DDPNY 86
PN+
Sbjct: 65 --PNW 67
>gi|260792728|ref|XP_002591366.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
gi|229276571|gb|EEN47377.1| hypothetical protein BRAFLDRAFT_227411 [Branchiostoma floridae]
Length = 678
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDK-SMRLGNNECPACRTHCASRRSLRDDPNYDAL 89
CP+C+ + R V+ CLH FCREC+ + + + ECP CRT + DP D L
Sbjct: 18 CPVCMLHFRDPR-VLPCLHTFCRECLQEWASKQQPLECPTCRTQVS-----LPDPGVDGL 71
Query: 90 ISALYP----DIDKYEEEELAFHEE 110
+ Y D +EE L E+
Sbjct: 72 RTNFYVNNLLDFAAVKEENLEASED 96
>gi|56422971|gb|AAV90800.1| recombination activating gene 1, partial [Eublepharis turcmenicus]
Length = 962
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 16 RFVFVELP-EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 74
+ + V+ P + K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 235 KMLTVDYPADFVKSISCQICEHILADPVETT-CKHLFCRLCILKCLKVIGSYCPACRYPC 293
Query: 75 ASRRSLRDDPNYDALISALY---PDIDKYEEEELAFHEEERTRNKQ 117
+ ++ +++S L P D YEE L + + +KQ
Sbjct: 294 FPTDLVNPVRSFLSILSTLAVRCPVKDCYEEVSLGKYNHHLSTHKQ 339
>gi|55249660|gb|AAH85684.1| Tripartite motif-containing 50 [Rattus norvegicus]
Length = 484
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE--CPACR 71
+ +PE++ +QCPICL + K+ +++C H +C+ C+D ++E CP CR
Sbjct: 5 LTVPELQDQLQCPICLEVFKEP-LMLQCGHSYCKNCLDSLSEHLDSELRCPVCR 57
>gi|32880219|ref|NP_872596.1| E3 ubiquitin-protein ligase TRIM21 [Bos taurus]
gi|75064284|sp|Q7YRV4.1|RO52_BOVIN RecName: Full=E3 ubiquitin-protein ligase TRIM21; AltName:
Full=52 kDa Ro protein; AltName: Full=52 kDa
ribonucleoprotein autoantigen Ro/SS-A; AltName:
Full=Ro(SS-A); AltName: Full=Sjoegren syndrome type A
antigen; Short=SS-A; AltName: Full=Tripartite
motif-containing protein 21
gi|32307867|gb|AAP79314.1| Ro52/SS-A autoantigen [Bos taurus]
gi|61555596|gb|AAX46732.1| 52kD Ro/SSA autoantigen [Bos taurus]
gi|133778349|gb|AAI23701.1| Tripartite motif-containing 21 [Bos taurus]
gi|296479868|tpg|DAA21983.1| TPA: 52 kDa Ro protein [Bos taurus]
Length = 469
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
V L + ++V C ICL + + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 5 VPLTMMWEEVTCSICLDPMVEPMSI-ECGHSFCQECISEVGKEGGSVCPVCRRH 57
>gi|384248823|gb|EIE22306.1| hypothetical protein COCSUDRAFT_66556 [Coccomyxa subellipsoidea
C-169]
Length = 1770
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
CPICL + ++ RTV C H FC +CI +S+ ECP CR
Sbjct: 1518 CPICLDVCER-RTVTSCGHHFCSDCIHESVH-NRAECPICRA 1557
>gi|345315312|ref|XP_001511244.2| PREDICTED: E3 ubiquitin-protein ligase RNF8-like, partial
[Ornithorhynchus anatinus]
Length = 567
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR-RSLRDD 83
+ ++QC IC + T + C H FC CI + M+ ECP CR S+ RSL D
Sbjct: 403 LENELQCTICSDYFIEAVT-LNCAHSFCSFCISEWMKR-KEECPICRQLIQSKSRSLVLD 460
Query: 84 PNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQ 127
++ +L ++ +E A H +ER +Q++ + A+ Q
Sbjct: 461 NTIGRMVESLSAEV----KERWAAHVKERRAQRQLEQTSAEPLQ 500
>gi|130496620|ref|NP_001076355.1| novel zinc finger protein [Danio rerio]
Length = 450
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDP 84
D+ CP+C I K T ++ C H FC+EC+ + N ECP CR RRS +D P
Sbjct: 8 DLTCPVCQDIFK-TPVLLSCSHSFCKECLQQFWISKNTQECPVCR-----RRSSKDYP 59
>gi|449450966|ref|XP_004143233.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis sativus]
Length = 675
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
VF ++ KD CPIC+ II+ + C H FC CI +R ++CP C H S
Sbjct: 38 VFEASAQLDKDFLCPICMQIIRDA-FLTACGHSFCYMCIITHLR-NKSDCPCCAQHLTSD 95
Query: 78 RSLRDDPNY 86
+ PN+
Sbjct: 96 QLF---PNF 101
>gi|444726159|gb|ELW66699.1| putative E3 ubiquitin-protein ligase HECTD2 [Tupaia chinensis]
Length = 653
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE 101
+ +I L P + +++
Sbjct: 75 LEEIIFKLVPGLREHD 90
>gi|357510115|ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago truncatula]
gi|355500361|gb|AES81564.1| PHD finger protein 11-like protein [Medicago truncatula]
Length = 687
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ ++ +++CP+CL + KK ++ C H FC C+ S + +EC C T C S++
Sbjct: 20 MLHFQKLALELKCPLCLNLFKKP-VLLPCNHLFCSSCLADSTSI-RSECALCNTKC-SQK 76
Query: 79 SLRDDPNYDALISALYPDID 98
+R P +++++ +Y +D
Sbjct: 77 DIRHLPFVESIVT-IYKSLD 95
>gi|55742258|ref|NP_001007159.1| polycomb group RING finger protein 1 [Danio rerio]
gi|82209850|sp|Q7ZYZ7.1|PCGF1_DANRE RecName: Full=Polycomb group RING finger protein 1
gi|126631863|gb|AAI34013.1| Polycomb group ring finger 1 [Danio rerio]
Length = 261
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V +++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 32 VKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNIKIHET 90
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + + E++ + + R + IQ S
Sbjct: 91 QPLLNLKLDRVMQDIVYKLVPGLQESEDKRIKEFYQSRGLERIIQPS 137
>gi|432116843|gb|ELK37430.1| E3 ubiquitin-protein ligase UHRF1 [Myotis davidii]
Length = 835
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ + QC C ++ + T + C H C+ C+D+S R CPACR S++
Sbjct: 757 LNKVEETFQCICCQELVFRPITTV-CQHNVCKNCLDRSFRAQVFSCPACRGELGRNYSMK 815
Query: 82 DDPNYDALISALYP 95
+ A+++ L+P
Sbjct: 816 VNQPLQAILTQLFP 829
>gi|82217516|sp|Q91648.1|BMI1A_XENLA RecName: Full=Polycomb complex protein BMI-1-A; AltName:
Full=Polycomb group RING finger protein 4-A
gi|1086577|gb|AAC59729.1| xbmi-1 [Xenopus laevis]
Length = 326
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRADKTLQDIVYKLVPGLFKGE 90
>gi|14043225|gb|AAH07602.1| Polycomb group ring finger 6 [Homo sapiens]
Length = 277
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 124 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 174
>gi|37655165|ref|NP_115530.2| polycomb group RING finger protein 6 isoform b [Homo sapiens]
gi|119570035|gb|EAW49650.1| polycomb group ring finger 6, isoform CRA_d [Homo sapiens]
Length = 275
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|355689986|gb|AER99010.1| RAC/CDC42 exchange factor isoform 1 [Mustela putorius furo]
Length = 686
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
CPICLG I+ +T+ +C H FC CI +++++ CP C
Sbjct: 9 CPICLGEIQNAKTLEKCRHSFCEGCITRALQV-KKACPMC 47
>gi|114632656|ref|XP_001135053.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Pan
troglodytes]
Length = 275
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|363735319|ref|XP_001234043.2| PREDICTED: polycomb group RING finger protein 6 [Gallus gallus]
Length = 413
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G T+ ECLH FC+ CI + +N CP C +
Sbjct: 185 MINLAELTPYILCSICKGYFIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 243
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 244 PLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFYKER 280
>gi|125851164|ref|XP_001342275.1| PREDICTED: tripartite motif-containing protein 35 [Danio rerio]
Length = 459
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN-ECPACRTHCASRRSLRDDPNY 86
D CP+C I K T ++ C H FC+EC+ + R N ECP CR RRS + P
Sbjct: 8 DYICPVCQDIFK-TPVILSCSHSFCQECLQQFWRSKNTQECPVCR-----RRSSKGHPPV 61
Query: 87 DALISAL 93
+ + L
Sbjct: 62 NLALKNL 68
>gi|302564245|ref|NP_001181540.1| polycomb group RING finger protein 6 [Macaca mulatta]
gi|402881389|ref|XP_003904256.1| PREDICTED: polycomb group RING finger protein 6 [Papio anubis]
Length = 350
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 180
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 217
>gi|12275862|gb|AAG50166.1|AF230387_1 tripartite motif protein TRIM31 beta [Homo sapiens]
Length = 267
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDK--SMRLGNNECPACRTHCASRRSLR 81
+++++V CPICL I++K T+ +C H FC +CI + G +CP C+T S R R
Sbjct: 9 KLQEEVICPICLDILQKPVTI-DCGHNFCPQCITQIGETSCGFFKCPLCKT---SVR--R 62
Query: 82 DDPNYDALISALYPDIDKYEEEELAFHEEERT 113
D +++L+ L I + E+ +E T
Sbjct: 63 DAIRFNSLLRNLVEKIQALQASEVQSKRKEAT 94
>gi|291238522|ref|XP_002739177.1| PREDICTED: polycomb group ring finger 5-like [Saccoglossus
kowalevskii]
Length = 252
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR---SL 80
E + C IC G + K T+ ECLH FC+ CI + N CP C L
Sbjct: 9 EFNHFITCSICGGYLIKPSTIAECLHTFCKSCIVRHFEESKN-CPRCGIQVHETHPCEML 67
Query: 81 RDDPNYDALISALYPDIDKYEEE 103
R D + ++ L P I + E++
Sbjct: 68 RMDKTMEDIVFKLVPGIQEREKQ 90
>gi|390340056|ref|XP_780401.3| PREDICTED: polycomb group RING finger protein 6-like
[Strongylocentrotus purpuratus]
Length = 214
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
+++ L E+ + + C +C G + T+ ECLH FC+ C+ ++ N CP C
Sbjct: 13 IYIRLTEVNQYITCHLCGGYLIDATTLTECLHTFCKSCLIMYIK-KNELCPTCDVLIHPS 71
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEE-ELAFHEEERTRNKQ 117
SL+ D ++ L P I + E+ E+ F +E Q
Sbjct: 72 NPVLSLKLDRTIQEIVYKLLPYIQEDEKAREVRFWKERNLEQPQ 115
>gi|296221130|ref|XP_002756615.1| PREDICTED: polycomb group RING finger protein 6 isoform 1
[Callithrix jacchus]
Length = 350
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 180
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 217
>gi|260942169|ref|XP_002615383.1| hypothetical protein CLUG_04265 [Clavispora lusitaniae ATCC 42720]
gi|238850673|gb|EEQ40137.1| hypothetical protein CLUG_04265 [Clavispora lusitaniae ATCC 42720]
Length = 461
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 28 DVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYD 87
D CPIC+ I K +EC H FC C+ K + G +CP CR A ++ D N D
Sbjct: 365 DYSCPICMSIAYKP-IRLECGHIFCVRCLVKMKKRGKTDCPLCRCQEAILKA--DSSNLD 421
Query: 88 A----LISALYP 95
LI +P
Sbjct: 422 LEIMDLIQRFFP 433
>gi|195150625|ref|XP_002016251.1| GL10594 [Drosophila persimilis]
gi|194110098|gb|EDW32141.1| GL10594 [Drosophila persimilis]
Length = 1624
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
V L + + C +C G + T++ECLH FC C+ +R + CP C ++
Sbjct: 272 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KDRFCPRCEMVINNAKP 330
Query: 79 SLRDDPNYDALISALYPDIDKYEEEEL---AFHEE 110
+++ D A++ L P + YE E + AF+++
Sbjct: 331 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKD 363
>gi|431922333|gb|ELK19424.1| E3 ubiquitin-protein ligase UHRF1 [Pteropus alecto]
Length = 651
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ + QC C ++ + T + C H C++C+D+S R CPACR +++
Sbjct: 573 LSKVEETFQCICCQELVFRPVTTV-CQHNVCKDCLDRSFRAQVFSCPACRYDLGRNYAMQ 631
Query: 82 DDPNYDALISALYP 95
+ A++S L+P
Sbjct: 632 VNQPLQAVLSQLFP 645
>gi|198457431|ref|XP_001360669.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
gi|198135975|gb|EAL25244.2| GA17752 [Drosophila pseudoobscura pseudoobscura]
Length = 1591
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC-ASRR 78
V L + + C +C G + T++ECLH FC C+ +R + CP C ++
Sbjct: 238 VLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLR-KDRFCPRCEMVINNAKP 296
Query: 79 SLRDDPNYDALISALYPDIDKYEEEEL---AFHEE 110
+++ D A++ L P + YE E + AF+++
Sbjct: 297 NIKSDTTLQAIVYKLVPGL--YERELMRKRAFYKD 329
>gi|426245019|ref|XP_004016313.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Ovis aries]
Length = 465
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
V L + ++V C ICL + + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 5 VPLTMMWEEVTCSICLDPMVEPMSI-ECGHSFCQECISEVGKEGGSVCPVCRRH 57
>gi|78070589|gb|AAI06746.1| BRCA1 protein [Homo sapiens]
Length = 473
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRRSLRD 82
++K ++CPICL +IK+ + +C H FC+ C+ K + + G ++CP C+ ++RSL++
Sbjct: 18 MQKILECPICLELIKEPVST-KCDHIFCKFCMLKLLNQKKGPSQCPLCKND-ITKRSLQE 75
Query: 83 DPNYDALISALYPDI 97
+ L+ L I
Sbjct: 76 STRFSQLVEELLKII 90
>gi|35902786|ref|NP_919347.1| polycomb complex protein BMI-1-A [Danio rerio]
gi|21668469|dbj|BAC01266.1| psc1 [Danio rerio]
Length = 322
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 9 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLE-TSKYCPICDVQVHKTKP 67
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 68 LLNIRSDKTLQDIVYKLVPGLFKNE 92
>gi|326432942|gb|EGD78512.1| hypothetical protein PTSG_09210 [Salpingoeca sp. ATCC 50818]
Length = 569
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT---HCASRRSLRDDPN 85
+ C +C G + T+ ECLH FC+ CI NN CP C T +LR D
Sbjct: 335 LMCRLCDGYLIDATTLSECLHTFCKSCIVNFFE-SNNSCPVCGTLAHEINPHDTLRQDRT 393
Query: 86 YDALISALYPDI 97
++ L P +
Sbjct: 394 MQTIVYKLVPGL 405
>gi|149588816|ref|XP_001517507.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21-like
[Ornithorhynchus anatinus]
Length = 342
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ I K++ CPICL + ++ +C H FC CI K R G++ CP CR +
Sbjct: 5 MQVERIGKEMTCPICLEFSGEPMSI-KCGHSFCHRCISKLWREGHSSCPECRAS-FQQED 62
Query: 80 LRDDPNYDALISALYPDI 97
+R + L+ +L P +
Sbjct: 63 IRPNRQLGNLVESLKPVV 80
>gi|73998781|ref|XP_852021.1| PREDICTED: polycomb group RING finger protein 6 isoform 2 [Canis
lupus familiaris]
Length = 349
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 121 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 179
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 180 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 216
>gi|307110903|gb|EFN59138.1| hypothetical protein CHLNCDRAFT_137960 [Chlorella variabilis]
Length = 1904
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
CPICL + TRT+ C H +C CI + + G CP CRT
Sbjct: 1648 CPICLDDLS-TRTITSCGHHYCPPCIREVLAQGTRLCPICRT 1688
>gi|432952637|ref|XP_004085172.1| PREDICTED: probable E3 ubiquitin-protein ligase DTX3-like [Oryzias
latipes]
Length = 365
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI 90
C IC+G I + T+ +C H FCR C+D++ ++ CP CR + + + P ++I
Sbjct: 182 CSICMGDIVEKTTLEKCGHSFCRFCLDQAFKV-KKACPVCRL--VYGQLVGNQPANGSMI 238
Query: 91 SALYPDIDKYEEEELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTASPFMTR 150
PD+ EL HE I S Q R PG D +
Sbjct: 239 VERDPDL------ELPGHEGYGCIC--IIYSFPPGLQSIEHPNPGVRYPGTDRVAYLPDS 290
Query: 151 PQRNPRTAHLRRRRNSR 167
P+ N LRR R
Sbjct: 291 PEGNRVLGLLRRAFEQR 307
>gi|348535115|ref|XP_003455047.1| PREDICTED: RING finger protein 166-like [Oreochromis niloticus]
Length = 245
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 25 IRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRT 72
I CPICL + K ++ C H FC EC+ +++ + CP CR
Sbjct: 35 IESQFSCPICLEVYHKPVSIASCAHTFCGECLQPCLQVTSPLCPLCRV 82
>gi|297689565|ref|XP_002822205.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Pongo abelii]
Length = 475
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L + ++V CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 7 LTMMWEEVTCPICLDPFMEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|291228047|ref|XP_002733991.1| PREDICTED: lethal (3) 73Ah-like [Saccoglossus kowalevskii]
Length = 220
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G T+ ECLH FC+ CI + + +N CP C
Sbjct: 5 IRLVEVNAHITCRICHGYFIDATTITECLHTFCKSCIVRYLE-EHNTCPTC 54
>gi|169642395|gb|AAI60628.1| Si:dkey-3h3.3 protein [Danio rerio]
Length = 208
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 27 KDVQCPICLGIIK--KTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
KD CPICL IK ++ + +C HRFC++C+D + +L CP C
Sbjct: 22 KDETCPICLETIKMPESTVLTKCQHRFCKDCLDTAFQL-KPACPIC 66
>gi|192205|gb|AAA37301.1| zinc finger protein [Mus musculus]
Length = 249
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C R
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE-TSKYCPICDVQVHKTRP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|405957197|gb|EKC23426.1| Polycomb complex protein BMI-1, partial [Crassostrea gigas]
Length = 855
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSL 80
E+ + C +C G + T++ECLH FCR CI + N CP C + ++L
Sbjct: 16 ELNPYLTCVLCGGYLIDATTIIECLHSFCRTCIVHYLHTS-NYCPVCECLVHKKHPHQNL 74
Query: 81 RDDPNYDALISALYPDI 97
R D ++ L P +
Sbjct: 75 RSDKTLQDVVYKLVPGL 91
>gi|354506347|ref|XP_003515225.1| PREDICTED: polycomb group RING finger protein 6-like [Cricetulus
griseus]
Length = 260
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 32 LLNLAELTPYIMCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCSIVVHQTQ 90
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 91 PLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFYKER 127
>gi|449282985|gb|EMC89699.1| Polycomb group RING finger protein 5 [Columba livia]
Length = 256
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELQREIEFWKKNK 102
>gi|328713971|ref|XP_001946307.2| PREDICTED: hypothetical protein LOC100161947 [Acyrthosiphon pisum]
Length = 608
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL---RDDPNYD 87
C +C G TV+ECLH FCR CI K + N CP C + L R D
Sbjct: 17 CVLCGGYFVDATTVIECLHSFCRSCIVKYLE-RNKYCPICDVLVHKSKPLSNIRPDHTLQ 75
Query: 88 ALISALYPDIDKYEEEELAFHEEERTRNK 116
++ L P + ++E+ + RNK
Sbjct: 76 NIVYKLVPHL---FQKEMVMRRDFYNRNK 101
>gi|224052561|ref|XP_002188526.1| PREDICTED: polycomb group RING finger protein 5 [Taeniopygia
guttata]
Length = 256
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I L P + E+EL E +NK
Sbjct: 75 LEEIIFKLVPGL---REQELQREIEFWKKNK 102
>gi|260786248|ref|XP_002588170.1| hypothetical protein BRAFLDRAFT_118878 [Branchiostoma floridae]
gi|229273329|gb|EEN44181.1| hypothetical protein BRAFLDRAFT_118878 [Branchiostoma floridae]
Length = 256
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
V L ++ + C +C G + T+ ECLH FC C+ K + +N CP C
Sbjct: 20 VRLIDLNPYIVCRLCGGYLIDATTITECLHPFCHSCLLKHLDF-SNRCPTCNVIIHETNP 78
Query: 80 L---RDDPNYDALISALYPDIDKYEEE-ELAFHEE 110
L R D +I L P +++ E++ E F+EE
Sbjct: 79 LYNIRPDRTLQDIIYKLLPALEEDEKKREKTFYEE 113
>gi|156067740|gb|ABU43507.1| recombination activating protein 1, partial [Eublepharis
macularius]
Length = 346
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 16 RFVFVELP-EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHC 74
+ + V+ P + K + C IC I+ C H FCR CI K +++ + CPACR C
Sbjct: 236 KMLTVDYPADFVKSISCQICEHILADP-VETTCKHLFCRLCILKCLKVIGSYCPACRYPC 294
Query: 75 ASRRSLRDDPNYDALISALY---PDIDKYEEEELAFHEEERTRNKQ 117
+ ++ +++S L P D YEE L + + +KQ
Sbjct: 295 FPTDLVNPVRSFLSILSTLAVRCPVKDCYEEVSLGKYNHHLSTHKQ 340
>gi|109090466|ref|XP_001113708.1| PREDICTED: polycomb group RING finger protein 6-like isoform 1
[Macaca mulatta]
Length = 275
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 172
>gi|409040140|gb|EKM49628.1| hypothetical protein PHACADRAFT_166995 [Phanerochaete carnosa
HHB-10118-sp]
Length = 680
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 44 VMECLHRFCRECIDKSMRLGNNECPACRT 72
+M C H F ++C+DK +++G N CPACRT
Sbjct: 633 LMTCRHAFHKDCVDKWLQIGRNNCPACRT 661
>gi|338722384|ref|XP_001915866.2| PREDICTED: LOW QUALITY PROTEIN: tripartite motif-containing
protein 75 [Equus caballus]
Length = 470
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSM--RLGNNECPACRTHCASRR 78
L ++ + CPICL ++ T+ EC H FCR CI +S R CP CR C R
Sbjct: 7 LAGLQAEANCPICLDYLRDPVTI-ECGHNFCRSCIQQSWEDRWDMFPCPVCRHPCQQRH 64
>gi|321476884|gb|EFX87844.1| hypothetical protein DAPPUDRAFT_37015 [Daphnia pulex]
Length = 89
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 12/93 (12%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR---SLRDDPN 85
+ C IC G + T+ EC+H FC+ C+ + + G CP C R L+ D
Sbjct: 1 LTCSICQGYLIDATTITECMHTFCKSCLLQRVESGRTFCPRCGVQLQRSRLGEQLKLDHA 60
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNKQI 118
ALI P + +HEE+R R +
Sbjct: 61 VQALIYTAVPGL---------WHEEQRRRKHFV 84
>gi|158563842|sp|Q8JIR0.2|BMI1A_DANRE RecName: Full=Polycomb complex protein BMI-1-A; AltName:
Full=Polycomb group RING finger protein 4-A
gi|29436448|gb|AAH49423.1| Bmi1 protein [Danio rerio]
Length = 320
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 7 IKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLE-TSKYCPICDVQVHKTKP 65
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 66 LLNIRSDKTLQDIVYKLVPGLFKNE 90
>gi|118496046|dbj|BAF37539.1| DNA repair and recombination protein RAD5B [Neurospora crassa]
Length = 950
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 30 QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDAL 89
+CPIC+ + + C H FCR CIDK + + +CP CR + + L P + A
Sbjct: 708 ECPICIDPLSNP-IITHCKHVFCRGCIDKVIEV-QQKCPMCRAPLSEDKLLEPAPEHSA- 764
Query: 90 ISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
+EEEL E T++ + +A +A +
Sbjct: 765 ---------TQDEEEL----ESETKSSKTEAVLALV 787
>gi|355783070|gb|EHH64991.1| hypothetical protein EGM_18328 [Macaca fascicularis]
Length = 350
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 122 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 180
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 181 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 217
>gi|440893076|gb|ELR45987.1| E3 ubiquitin-protein ligase TRIM21, partial [Bos grunniens mutus]
Length = 481
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
V L + ++V C ICL + + ++ EC H FC+ECI + + G + CP CR H
Sbjct: 17 VPLTMMWEEVTCSICLDPMVEPMSI-ECGHSFCQECISEVGKEGGSVCPVCRRH 69
>gi|432929897|ref|XP_004081281.1| PREDICTED: polycomb complex protein BMI-1-like [Oryzias latipes]
Length = 584
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 20 VELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRS 79
+++ E+ + C +C G T++ECLH FC+ CI + + + CP C +
Sbjct: 259 IKITELNPHLICVLCGGYFIDATTIIECLHSFCKMCIVRYLE-TSKYCPICDVQVHKTKP 317
Query: 80 L---RDDPNYDALISALYPDIDKYE 101
L R D ++ L P + K E
Sbjct: 318 LLNIRSDKTLQDIVYKLVPGLFKNE 342
>gi|351706754|gb|EHB09673.1| Polycomb group RING finger protein 2 [Heterocephalus glaber]
Length = 452
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 7 PLKFSGFFCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE 66
P R +++ E+ + C +C G T++ECLH FC+ CI + + N
Sbjct: 120 PPPHPSIMHRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYLET-NKY 178
Query: 67 CPACRT---HCASRRSLRDDPNYDALISALYPDIDKYE 101
CP C C S D ++ L P + K E
Sbjct: 179 CPMCDVPVLACGLGESRGSDKTLQDIVYKLVPGLFKDE 216
>gi|345792753|ref|XP_003433662.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Canis
lupus familiaris]
Length = 274
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 121 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 171
>gi|308803629|ref|XP_003079127.1| Transcription factor TCF20 (ISS) [Ostreococcus tauri]
gi|116057582|emb|CAL53785.1| Transcription factor TCF20 (ISS) [Ostreococcus tauri]
Length = 599
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 20/179 (11%)
Query: 14 FCRFVFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTH 73
F V L E+ + C +CL + KT + C H C EC + + CP CRT
Sbjct: 10 FREHVTTSLKELGDHLACAVCLSL-PKTPIKLGCSHYLCDECAKRVFGNKKSTCPTCRTP 68
Query: 74 CASRRSLRDD---------PNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQASIAK 124
C R S D+ N A +S + D EL F + ++ ++A+
Sbjct: 69 CTKRESRMDERMKSIVDSFTNVLAAVSGAMGECD-----ELPFGSQIPKEQLELHGAVAQ 123
Query: 125 IFQRQSEALVK---RRTPGKDTASPFMTRPQRNPRTAHLRRRRNSRGTEHQGSEDNEDE 180
+R S +LVK PG+ T + + T + R R + Q E + E
Sbjct: 124 --RRTSMSLVKGLRAGMPGESTLRRAVEMIWEDKETERTQGRTKERASTSQACETADAE 180
>gi|28076973|ref|NP_081930.1| polycomb group RING finger protein 6 [Mus musculus]
gi|77416553|sp|Q99NA9.1|PCGF6_MOUSE RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=Mel18 and Bmi1-like RING finger; AltName: Full=RING
finger protein 134
gi|13537208|dbj|BAB40780.1| mMBLR [Mus musculus]
gi|16740622|gb|AAH16195.1| Polycomb group ring finger 6 [Mus musculus]
gi|58476686|gb|AAH89460.1| Polycomb group ring finger 6 [Mus musculus]
gi|148710077|gb|EDL42023.1| polycomb group ring finger 6 [Mus musculus]
Length = 353
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 125 LINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 175
>gi|344252189|gb|EGW08293.1| Protein deltex-3-like [Cricetulus griseus]
Length = 872
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 31 CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDD 83
C IC+ +I R + +C H FC CI K+M L CP C+T +R + D
Sbjct: 552 CVICMNVISNKRVLSKCKHEFCTSCITKAMSL-KPVCPVCQTSYGIQRGNQPD 603
>gi|189441945|gb|AAI67306.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 249
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 22 VKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 73
>gi|344274773|ref|XP_003409189.1| PREDICTED: polycomb group RING finger protein 6-like isoform 2
[Loxodonta africana]
Length = 271
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C
Sbjct: 118 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKC 168
>gi|399216056|emb|CCF72744.1| unnamed protein product [Babesia microti strain RI]
Length = 428
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYD- 87
+ C +C G+ T+ CLH FC+ CI L +CP C H +L + YD
Sbjct: 186 LTCKLCKGLFFNAYTIKNCLHTFCKSCIITYAILVGQQCPVC--HQNINTNLEESIEYDN 243
Query: 88 ---ALISALYP 95
+++ L+P
Sbjct: 244 CIQSMVDKLFP 254
>gi|296237067|ref|XP_002763595.1| PREDICTED: tripartite motif-containing protein 60-like
[Callithrix jacchus]
Length = 460
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN--ECPACRTHC 74
V L E++ + CPICLG +K T C H FCR CI + + CP C HC
Sbjct: 3 VTASLAELQAEASCPICLGYLKDPVTT-HCGHNFCRSCIHQCWEDLQDIFPCPVCLHHC 60
>gi|291228890|ref|XP_002734409.1| PREDICTED: tumor necrosis factor receptor-associated factor
6-like [Saccoglossus kowalevskii]
Length = 555
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECP 68
+P + +CPICL +++ T +C HRFCR CI +SMR ++CP
Sbjct: 15 VPPLESKYECPICLMALREP-TQTQCGHRFCRSCICQSMRETGSKCP 60
>gi|410914467|ref|XP_003970709.1| PREDICTED: polycomb group RING finger protein 1-like [Takifugu
rubripes]
Length = 261
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V +++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 32 VKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNIKIHET 90
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + + E++ + + R + +Q S
Sbjct: 91 QPLLNLKLDRVMQDIVYKLVPGLQESEDKRIKEFYQSRGLERVVQPS 137
>gi|344274771|ref|XP_003409188.1| PREDICTED: polycomb group RING finger protein 6-like isoform 1
[Loxodonta africana]
Length = 346
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 118 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 176
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 177 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 213
>gi|302838865|ref|XP_002950990.1| hypothetical protein VOLCADRAFT_91533 [Volvox carteri f.
nagariensis]
gi|300263685|gb|EFJ47884.1| hypothetical protein VOLCADRAFT_91533 [Volvox carteri f.
nagariensis]
Length = 875
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRL-GNNECPACRTHCASRRSLRDDPNYD 87
+ CPICL +++K + CLH FC CI ++R G CP CR +RR ++ D
Sbjct: 19 IACPICLAVMEKP-ARLPCLHYFCWACITHNVRPRGEVICPVCRGK-TNRREIQADAKM- 75
Query: 88 ALISALY 94
IS LY
Sbjct: 76 TTISHLY 82
>gi|350529342|ref|NP_001089498.2| polycomb group RING finger protein 1 [Xenopus laevis]
gi|223590126|sp|Q4QR06.2|PCGF1_XENLA RecName: Full=Polycomb group RING finger protein 1
Length = 259
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 32 VKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 83
>gi|311248412|ref|XP_003123127.1| PREDICTED: E3 ubiquitin-protein ligase UHRF1 [Sus scrofa]
Length = 798
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ + QC C ++ + T + C H C++C+D+S + CPACR + +++
Sbjct: 720 LSKVEETFQCICCQELVFRPITTV-CQHNVCKDCLDRSFKAQVFSCPACRYNLGRHSTMQ 778
Query: 82 DDPNYDALISALYP 95
+ A++S L+P
Sbjct: 779 VNQPLQAVLSQLFP 792
>gi|350529343|ref|NP_001016417.2| polycomb group RING finger protein 1 [Xenopus (Silurana)
tropicalis]
gi|123893179|sp|Q28H21.1|PCGF1_XENTR RecName: Full=Polycomb group RING finger protein 1
gi|89273860|emb|CAJ81866.1| polycomb group ring finger 1 [Xenopus (Silurana) tropicalis]
Length = 259
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 32 VKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 83
>gi|397465878|ref|XP_003804705.1| PREDICTED: E3 ubiquitin-protein ligase TRIM21 [Pan paniscus]
Length = 475
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L + ++V CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|67678255|gb|AAH97736.1| MGC115420 protein [Xenopus laevis]
Length = 249
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPAC 70
V V++ E+ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 22 VKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQ-TSKYCPLC 73
>gi|15208660|ref|NP_003132.2| E3 ubiquitin-protein ligase TRIM21 [Homo sapiens]
gi|114635781|ref|XP_508239.2| PREDICTED: E3 ubiquitin-protein ligase TRIM21 isoform 2 [Pan
troglodytes]
gi|133250|sp|P19474.1|RO52_HUMAN RecName: Full=E3 ubiquitin-protein ligase TRIM21; AltName:
Full=52 kDa Ro protein; AltName: Full=52 kDa
ribonucleoprotein autoantigen Ro/SS-A; AltName:
Full=RING finger protein 81; AltName: Full=Ro(SS-A);
AltName: Full=Sjoegren syndrome type A antigen;
Short=SS-A; AltName: Full=Tripartite motif-containing
protein 21
gi|337485|gb|AAA36581.1| 52-kD Ro/SSA ribonucleoprotein [Homo sapiens]
gi|665918|gb|AAB87094.1| 52 kda component of SS-A/Ro autoantigen [Homo sapiens]
gi|747927|gb|AAA79867.1| RO52 [Homo sapiens]
gi|14790039|gb|AAH10861.1| Tripartite motif-containing 21 [Homo sapiens]
gi|119589251|gb|EAW68845.1| tripartite motif-containing 21 [Homo sapiens]
gi|167773601|gb|ABZ92235.1| tripartite motif-containing 21 [synthetic construct]
gi|261858824|dbj|BAI45934.1| tripartite motif-containing 21 [synthetic construct]
gi|410219268|gb|JAA06853.1| tripartite motif containing 21 [Pan troglodytes]
gi|410257202|gb|JAA16568.1| tripartite motif containing 21 [Pan troglodytes]
gi|410295476|gb|JAA26338.1| tripartite motif containing 21 [Pan troglodytes]
gi|410341117|gb|JAA39505.1| tripartite motif containing 21 [Pan troglodytes]
Length = 475
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACR 71
L + ++V CPICL + ++ EC H FC+ECI + + G + CP CR
Sbjct: 7 LTMMWEEVTCPICLDPFVEPVSI-ECGHSFCQECISQVGKGGGSVCPVCR 55
>gi|82705370|ref|XP_726942.1| processed variable antigen [Plasmodium yoelii yoelii 17XNL]
gi|23482557|gb|EAA18507.1| processed variable antigen-related [Plasmodium yoelii yoelii]
Length = 623
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 24 EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSL 80
+I D++C IC+ ++ T+ C H FCR+C++K+ + N+ CP CR++ ++++
Sbjct: 160 QISSDLECVICMKLLIMPVTI-PCGHNFCRDCLEKA-KEYNDTCPLCRSYMGDKQNV 214
>gi|431920375|gb|ELK18407.1| Polycomb group RING finger protein 1 [Pteropus alecto]
Length = 272
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
V V++ ++ + + C +C G T+ ECLH FC+ CI K ++ + CP C
Sbjct: 47 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQ-TSKYCPMCNIKIHET 105
Query: 78 R---SLRDDPNYDALISALYPDIDKYEEEELAFHEEERTRNKQIQAS 121
+ +L+ D ++ L P + EE+ + + R ++ Q S
Sbjct: 106 QPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQPS 152
>gi|426253029|ref|XP_004020204.1| PREDICTED: polycomb group RING finger protein 6 isoform 1 [Ovis
aries]
Length = 352
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 124 LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 182
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 183 PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKER 219
>gi|393225670|gb|EJD33602.1| hypothetical protein AURDEDRAFT_177316 [Auricularia delicata
TFB-10046 SS5]
Length = 258
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 21 ELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR 77
++ ++RK V+C ICL + K + +C H FC+ C+ ECP CR R
Sbjct: 159 KMADLRKQVECEICLETLWKPWALTDCGHTFCQTCLVSLFDRQKFECPTCRARVTHR 215
>gi|301621695|ref|XP_002940183.1| PREDICTED: e3 ubiquitin-protein ligase UHRF1-like [Xenopus
(Silurana) tropicalis]
gi|410591703|sp|F6UA42.2|UHRF1_XENTR RecName: Full=E3 ubiquitin-protein ligase UHRF1; AltName:
Full=Ubiquitin-like PHD and RING finger
domain-containing protein 1; AltName:
Full=Ubiquitin-like-containing PHD and RING finger
domains protein 1
Length = 775
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 22 LPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLR 81
L ++ + C C ++ + T EC H C+ C+D+S + + CPACR SL
Sbjct: 697 LSKVEETFLCICCQEVVYEPITT-ECHHNICKGCLDRSFKALVHNCPACRHDLGKNYSLN 755
Query: 82 DDPNYDALISALYPDIDK 99
+ A++S L+P ++
Sbjct: 756 VNKPLQAILSQLFPGYER 773
>gi|164423632|ref|XP_962645.2| hypothetical protein NCU07975 [Neurospora crassa OR74A]
gi|157070175|gb|EAA33409.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 898
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Query: 30 QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDAL 89
+CPIC+ + + C H FCR CIDK + + +CP CR + + L P + A
Sbjct: 656 ECPICIDPLSNP-IITHCKHVFCRGCIDKVIEV-QQKCPMCRAPLSEDKLLEPAPEHSA- 712
Query: 90 ISALYPDIDKYEEEELAFHEEERTRNKQIQASIAKI 125
+EEEL E T++ + +A +A +
Sbjct: 713 ---------TQDEEEL----ESETKSSKTEAVLALV 735
>gi|149062761|gb|EDM13184.1| rCG48011 [Rattus norvegicus]
Length = 203
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYE 101
+ +I L P + ++E
Sbjct: 75 LEEIIFKLVPGLREHE 90
>gi|147776031|emb|CAN67364.1| hypothetical protein VITISV_033303 [Vitis vinifera]
Length = 110
Score = 45.1 bits (105), Expect = 0.063, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 28 DVQCPICLGIIKKTRTVME---CLHRFCRECIDKSMRLGNNECPACRT 72
D QC +CL II + V E C H F +ECID M G CP CR+
Sbjct: 24 DSQCAVCLNIIGEXHEVRELGNCCHVFHKECIDAWMDQGQATCPLCRS 71
>gi|296195257|ref|XP_002745312.1| PREDICTED: tripartite motif-containing protein 60-like
[Callithrix jacchus]
Length = 460
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 18 VFVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNN--ECPACRTHC 74
V L E++ + CPICLG +K T C H FCR CI + + CP C HC
Sbjct: 3 VAASLAELQAEASCPICLGYLKDPVTT-HCGHNFCRSCIHQCWEDLQDIFPCPVCLHHC 60
>gi|449433281|ref|XP_004134426.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis
sativus]
gi|449504181|ref|XP_004162275.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Cucumis
sativus]
Length = 329
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 20 VELP--EIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNE-CPACRTHCAS 76
V+LP ++ + CP+C + T+ ECLH FCR+CI + + E CP C T+
Sbjct: 8 VKLPTEKLMGCLTCPLCHNLFTNATTISECLHTFCRDCIYEKIAEEELEGCPVCNTNLGG 67
Query: 77 --RRSLRDDPNYDALISALY 94
LR D D L ++
Sbjct: 68 VPLEKLRADHTMDDLREKIF 87
>gi|61557118|ref|NP_001013172.1| polycomb group RING finger protein 6 [Rattus norvegicus]
gi|77416554|sp|Q5XI70.1|PCGF6_RAT RecName: Full=Polycomb group RING finger protein 6; AltName:
Full=RING finger protein 134
gi|53733579|gb|AAH83820.1| Polycomb group ring finger 6 [Rattus norvegicus]
Length = 351
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 19 FVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR 78
+ L E+ + C IC G + T+ ECLH FC+ CI + +N CP C +
Sbjct: 123 LINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY-SNRCPKCNIVVHQTQ 181
Query: 79 SL---RDDPNYDALISALYPDIDKYEEEELAFHEEER 112
L R D ++ L ++++ E++++ +ER
Sbjct: 182 PLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFYKER 218
>gi|339522219|gb|AEJ84274.1| polycomb group RING finger protein 5 [Capra hircus]
Length = 236
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASR---RSLRDDPN 85
+ C IC G + K TV ECLH FC+ CI + +N+CP C LR D
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHFE-DSNDCPRCGNQVHETNPLEMLRLDNT 74
Query: 86 YDALISALYPDIDKYEEEELAFHEEERTRNK 116
+ +I P + E+EL E +NK
Sbjct: 75 LEEIIFKFVPGL---REQELERESEFWKKNK 102
>gi|156372728|ref|XP_001629188.1| predicted protein [Nematostella vectensis]
gi|156216182|gb|EDO37125.1| predicted protein [Nematostella vectensis]
Length = 92
Score = 45.1 bits (105), Expect = 0.065, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 29 VQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLG-NNECPACRTHCASRRS---LRDDP 84
+ C +C G + K T+ ECLH FC+ CI ++ +N CP+C T LR D
Sbjct: 6 ITCGLCEGYLIKPTTITECLHTFCKSCIVTYLQDSEDNTCPSCNTVIHETNPFDLLRSDQ 65
Query: 85 NYDALISALYPDIDK 99
+ ++ L P + +
Sbjct: 66 TLEDIVFKLVPGLQQ 80
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,202,288,372
Number of Sequences: 23463169
Number of extensions: 257237688
Number of successful extensions: 1418722
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 8288
Number of HSP's that attempted gapping in prelim test: 1403897
Number of HSP's gapped (non-prelim): 18419
length of query: 403
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 258
effective length of database: 8,957,035,862
effective search space: 2310915252396
effective search space used: 2310915252396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)