Query 015680
Match_columns 403
No_of_seqs 240 out of 4263
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 16:49:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015680.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015680hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 8.9E-39 3.1E-43 289.5 20.9 210 184-394 3-265 (282)
2 2xai_A ASB-9, ankyrin repeat a 100.0 4.2E-38 1.4E-42 282.3 23.6 203 189-393 2-205 (261)
3 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-38 4.5E-43 284.2 20.0 194 186-379 53-249 (253)
4 2f8y_A Notch homolog 1, transl 100.0 9.5E-38 3.3E-42 273.0 24.3 197 186-382 21-220 (223)
5 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-37 4E-42 275.6 24.2 215 185-399 4-237 (241)
6 3aji_A 26S proteasome non-ATPa 100.0 3E-38 1E-42 277.7 19.7 194 185-378 35-230 (231)
7 3d9h_A CDNA FLJ77766, highly s 100.0 1.1E-37 3.6E-42 283.2 23.6 198 184-382 53-251 (285)
8 1yyh_A HN1;, notch 1, ankyrin 100.0 8.3E-38 2.8E-42 279.0 22.2 215 185-399 5-244 (253)
9 3b7b_A Euchromatic histone-lys 100.0 1.8E-37 6E-42 273.9 23.8 211 183-394 4-217 (237)
10 2rfa_A Transient receptor pote 100.0 8.3E-38 2.8E-42 275.1 21.6 194 189-382 2-226 (232)
11 3utm_A Tankyrase-1; tankyrase, 100.0 3.2E-37 1.1E-41 287.9 24.9 236 156-393 25-319 (351)
12 4b93_B Ankyrin repeat domain-c 100.0 8.2E-38 2.8E-42 281.1 16.5 231 141-377 9-243 (269)
13 3kea_A K1L; tropism, ANK repea 100.0 9.7E-38 3.3E-42 283.4 16.4 214 184-400 25-243 (285)
14 1wdy_A 2-5A-dependent ribonucl 100.0 2.5E-36 8.7E-41 273.4 25.4 214 187-400 36-275 (285)
15 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-37 4.5E-42 275.3 15.7 223 155-377 9-240 (241)
16 3hra_A Ankyrin repeat family p 100.0 1.7E-36 5.8E-41 260.7 22.1 188 189-376 4-201 (201)
17 2dzn_A Probable 26S proteasome 100.0 2.5E-36 8.7E-41 264.8 23.5 204 190-394 2-215 (228)
18 3ljn_A Hypothetical protein; a 100.0 7E-37 2.4E-41 287.7 21.2 221 155-379 20-270 (364)
19 4b93_B Ankyrin repeat domain-c 100.0 6.5E-37 2.2E-41 275.2 19.7 197 186-382 7-214 (269)
20 3aji_A 26S proteasome non-ATPa 100.0 3.9E-36 1.3E-40 264.2 23.8 204 190-394 6-212 (231)
21 1ikn_D Protein (I-kappa-B-alph 100.0 5.4E-38 1.9E-42 277.2 10.5 196 186-381 4-212 (236)
22 2etb_A Transient receptor pote 100.0 2.7E-37 9.3E-42 276.1 14.8 193 190-382 2-250 (256)
23 1wdy_A 2-5A-dependent ribonucl 100.0 9.7E-36 3.3E-40 269.6 24.5 223 158-382 42-282 (285)
24 2fo1_E LIN-12 protein; beta-ba 100.0 1.5E-36 5E-41 286.3 19.4 226 154-379 124-372 (373)
25 4gpm_A Engineered protein OR26 100.0 1E-35 3.5E-40 247.9 20.4 156 193-379 7-162 (169)
26 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-35 3.8E-40 286.4 23.6 246 153-400 12-267 (437)
27 2xai_A ASB-9, ankyrin repeat a 100.0 5E-36 1.7E-40 268.7 19.6 193 183-379 29-223 (261)
28 3b7b_A Euchromatic histone-lys 100.0 8.6E-36 2.9E-40 263.1 20.5 190 185-374 39-231 (237)
29 3d9h_A CDNA FLJ77766, highly s 100.0 6.2E-36 2.1E-40 271.6 19.6 193 184-380 86-281 (285)
30 1n11_A Ankyrin; clathrin, BAND 100.0 2.3E-35 8E-40 284.1 23.1 223 158-382 149-373 (437)
31 4gpm_A Engineered protein OR26 100.0 4.1E-35 1.4E-39 244.2 20.4 160 154-347 4-163 (169)
32 1s70_B 130 kDa myosin-binding 100.0 4E-35 1.4E-39 267.9 22.2 197 186-382 36-261 (299)
33 1oy3_D Transcription factor in 100.0 8.3E-36 2.8E-40 269.9 17.4 183 184-366 39-271 (282)
34 4g8k_A 2-5A-dependent ribonucl 100.0 6.6E-35 2.3E-39 271.3 23.2 241 159-400 29-323 (337)
35 3eu9_A Huntingtin-interacting 100.0 8.8E-35 3E-39 256.6 22.6 219 158-378 12-235 (240)
36 2pnn_A Transient receptor pote 100.0 3.5E-36 1.2E-40 271.5 13.8 197 185-381 8-262 (273)
37 3eu9_A Huntingtin-interacting 100.0 5.8E-35 2E-39 257.8 21.3 215 185-399 4-231 (240)
38 2fo1_E LIN-12 protein; beta-ba 100.0 6.3E-36 2.2E-40 282.0 15.8 213 188-400 123-368 (373)
39 2f8y_A Notch homolog 1, transl 100.0 2.4E-35 8.3E-40 257.7 18.3 201 201-401 2-214 (223)
40 2dzn_A Probable 26S proteasome 100.0 2.4E-35 8.3E-40 258.5 18.2 187 186-375 32-227 (228)
41 3utm_A Tankyrase-1; tankyrase, 100.0 2.5E-34 8.6E-39 268.3 24.4 217 185-401 19-303 (351)
42 3jxi_A Vanilloid receptor-rela 100.0 7.9E-36 2.7E-40 267.2 13.0 194 189-382 4-254 (260)
43 3kea_A K1L; tropism, ANK repea 100.0 3E-35 1E-39 267.0 11.8 215 156-381 32-249 (285)
44 4g8k_A 2-5A-dependent ribonucl 100.0 2.4E-33 8.3E-38 260.7 24.9 215 186-400 21-295 (337)
45 1s70_B 130 kDa myosin-binding 100.0 3.1E-34 1.1E-38 262.0 15.4 193 184-377 67-288 (299)
46 4hbd_A KN motif and ankyrin re 100.0 8.7E-34 3E-38 256.1 15.0 190 188-377 74-274 (276)
47 2rfm_A Putative ankyrin repeat 100.0 4.9E-33 1.7E-37 237.4 18.1 161 216-376 28-190 (192)
48 3v31_A Ankyrin repeat family A 100.0 2.2E-32 7.4E-37 227.9 18.3 161 222-382 2-164 (167)
49 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.6E-32 8.9E-37 226.2 17.1 155 223-378 5-162 (162)
50 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.1E-32 2.1E-36 225.7 19.2 154 223-376 14-169 (169)
51 3v30_A DNA-binding protein rfx 100.0 3.4E-32 1.2E-36 227.9 16.4 158 192-380 4-162 (172)
52 3ljn_A Hypothetical protein; a 100.0 5.9E-33 2E-37 260.9 13.1 193 188-380 82-316 (364)
53 1ikn_D Protein (I-kappa-B-alph 100.0 6.2E-33 2.1E-37 244.7 12.0 210 154-363 7-229 (236)
54 2rfa_A Transient receptor pote 100.0 3E-31 1E-35 233.2 21.0 178 222-399 2-218 (232)
55 3v30_A DNA-binding protein rfx 100.0 1.3E-31 4.6E-36 224.3 17.6 142 258-399 4-156 (172)
56 2y1l_E Darpin-8.4; hydrolase-i 100.0 7.5E-31 2.6E-35 219.1 20.0 158 186-343 10-169 (169)
57 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.9E-31 9.8E-36 219.9 16.5 155 190-345 5-162 (162)
58 3v31_A Ankyrin repeat family A 100.0 4.2E-31 1.4E-35 220.1 16.6 158 189-346 2-161 (167)
59 1awc_B Protein (GA binding pro 100.0 1.5E-30 5.1E-35 213.6 19.0 147 225-372 4-152 (153)
60 3twr_A Tankyrase-2; ankyrin re 100.0 3.9E-31 1.3E-35 219.8 14.7 156 221-377 6-164 (165)
61 2rfm_A Putative ankyrin repeat 100.0 4.8E-31 1.6E-35 225.0 15.5 161 183-343 28-190 (192)
62 3hra_A Ankyrin repeat family p 100.0 4.5E-30 1.5E-34 220.4 20.8 181 220-400 2-200 (201)
63 2etb_A Transient receptor pote 100.0 3.8E-31 1.3E-35 236.1 14.6 178 222-399 1-242 (256)
64 3f6q_A Integrin-linked protein 100.0 1.4E-30 4.9E-35 219.5 17.0 159 190-379 5-164 (179)
65 3f6q_A Integrin-linked protein 100.0 1.1E-30 3.8E-35 220.2 16.1 127 256-382 5-134 (179)
66 1sw6_A Regulatory protein SWI6 100.0 1.1E-31 3.7E-36 248.4 10.7 194 192-394 99-323 (327)
67 1sw6_A Regulatory protein SWI6 100.0 4.6E-31 1.6E-35 244.2 13.2 175 182-364 122-327 (327)
68 1awc_B Protein (GA binding pro 100.0 7.6E-30 2.6E-34 209.3 18.9 149 190-339 2-152 (153)
69 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.2E-30 1.4E-34 211.5 17.1 150 224-375 3-155 (156)
70 2vge_A RELA-associated inhibit 100.0 1.2E-33 4.1E-38 247.9 -4.6 190 185-377 16-213 (229)
71 2pnn_A Transient receptor pote 100.0 5.2E-31 1.8E-35 237.6 11.4 205 154-358 12-272 (273)
72 3twr_A Tankyrase-2; ankyrin re 100.0 6.2E-30 2.1E-34 212.6 16.0 157 187-344 5-164 (165)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.3E-29 2.2E-33 204.4 17.8 151 190-342 2-155 (156)
74 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.8E-30 6.2E-35 229.4 6.8 188 188-378 3-204 (239)
75 3jxi_A Vanilloid receptor-rela 100.0 7.3E-30 2.5E-34 228.3 10.6 161 187-347 43-252 (260)
76 4hbd_A KN motif and ankyrin re 100.0 8.5E-29 2.9E-33 223.4 15.9 161 183-343 104-273 (276)
77 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.3E-29 4.4E-34 223.9 9.6 160 220-380 2-166 (239)
78 1d9s_A Cyclin-dependent kinase 100.0 1.7E-28 5.8E-33 197.1 13.3 131 247-378 3-136 (136)
79 1d9s_A Cyclin-dependent kinase 100.0 5.5E-28 1.9E-32 194.1 12.8 132 213-345 2-136 (136)
80 1bi7_B P16INK4A, MTS1, multipl 100.0 3.1E-28 1.1E-32 200.3 10.7 143 217-360 6-151 (156)
81 3t8k_A Uncharacterized protein 100.0 3E-28 1E-32 206.1 10.8 161 190-377 6-178 (186)
82 2vge_A RELA-associated inhibit 99.9 6.9E-29 2.4E-33 217.5 3.2 170 206-378 1-178 (229)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.7E-26 2E-30 179.3 16.2 125 223-378 2-126 (126)
84 2aja_A Ankyrin repeat family p 99.9 5.2E-29 1.8E-33 233.1 -2.0 204 188-399 90-370 (376)
85 2jab_A H10-2-G3; HER2, darpin, 99.9 4.5E-26 1.5E-30 182.9 14.0 125 221-376 12-136 (136)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 7.5E-27 2.6E-31 192.1 8.8 142 185-327 7-151 (156)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.7E-25 5.7E-30 176.6 16.2 125 190-345 2-126 (126)
88 2aja_A Ankyrin repeat family p 99.9 2.3E-28 7.9E-33 228.7 -1.6 175 190-379 65-251 (376)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-25 6E-30 179.4 14.5 128 185-343 9-136 (136)
90 3c5r_A BARD-1, BRCA1-associate 99.9 1.9E-26 6.6E-31 185.2 8.8 133 214-378 2-134 (137)
91 3deo_A Signal recognition part 99.9 4.2E-27 1.4E-31 199.0 4.9 137 221-375 42-181 (183)
92 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-25 3.7E-30 180.8 10.0 128 186-344 6-133 (137)
93 3ui2_A Signal recognition part 99.9 3.1E-25 1.1E-29 196.3 12.2 140 221-378 43-185 (244)
94 3ui2_A Signal recognition part 99.9 3.5E-24 1.2E-28 189.5 13.0 141 187-345 42-185 (244)
95 2b0o_E UPLC1; arfgap, structur 99.9 2.8E-24 9.6E-29 195.8 11.9 138 223-366 151-299 (301)
96 3deo_A Signal recognition part 99.9 8.2E-24 2.8E-28 178.7 13.7 138 187-342 41-181 (183)
97 3aaa_C Myotrophin, protein V-1 99.9 3.5E-24 1.2E-28 168.6 10.0 115 221-366 5-119 (123)
98 3ehr_A Osteoclast-stimulating 99.9 1.8E-24 6.3E-29 188.5 7.8 130 220-349 70-202 (222)
99 2b0o_E UPLC1; arfgap, structur 99.9 7.9E-24 2.7E-28 192.9 11.2 138 190-333 151-299 (301)
100 3t8k_A Uncharacterized protein 99.9 4.2E-24 1.4E-28 180.5 8.6 136 188-349 36-183 (186)
101 3aaa_C Myotrophin, protein V-1 99.9 1.4E-23 4.8E-28 165.1 10.6 97 187-283 4-100 (123)
102 1dcq_A PYK2-associated protein 99.9 4.6E-22 1.6E-26 179.1 21.1 127 256-382 130-267 (278)
103 3ehr_A Osteoclast-stimulating 99.9 6.6E-24 2.3E-28 185.0 8.5 130 252-381 69-201 (222)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.4E-22 4.7E-27 151.1 12.3 93 286-378 1-93 (93)
105 3lvq_E ARF-GAP with SH3 domain 99.9 5.7E-22 2E-26 193.4 15.2 126 224-349 133-269 (497)
106 3jue_A Arfgap with coiled-coil 99.9 6E-22 2E-26 184.6 13.9 126 254-379 197-327 (368)
107 3jue_A Arfgap with coiled-coil 99.9 5.6E-22 1.9E-26 184.8 13.3 143 222-364 198-348 (368)
108 3lvq_E ARF-GAP with SH3 domain 99.9 1E-21 3.4E-26 191.7 14.8 132 192-329 134-276 (497)
109 1dcq_A PYK2-associated protein 99.9 3E-21 1E-25 173.8 16.8 123 224-346 131-264 (278)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.9 5.1E-21 1.7E-25 142.5 11.3 92 190-281 2-93 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.8 4.4E-21 1.5E-25 148.8 9.3 105 253-357 6-112 (115)
112 3idb_B CAMP-dependent protein 99.8 1.1E-20 3.8E-25 155.9 11.3 158 2-160 2-159 (161)
113 2ptm_A Hyperpolarization-activ 99.8 1.4E-20 4.7E-25 160.9 11.3 150 12-165 45-194 (198)
114 4f8a_A Potassium voltage-gated 99.8 7.6E-20 2.6E-24 150.6 13.6 144 14-162 3-148 (160)
115 2l6b_A NR1C; ankyrin, consensu 99.8 1.3E-20 4.5E-25 146.1 7.9 106 218-323 4-111 (115)
116 3gyd_A CNMP-BD protein, cyclic 99.8 3.8E-19 1.3E-23 150.4 13.3 138 27-164 28-165 (187)
117 3bpz_A Potassium/sodium hyperp 99.8 7.8E-20 2.7E-24 156.7 8.9 148 12-164 46-193 (202)
118 3mdp_A Cyclic nucleotide-bindi 99.8 1.9E-19 6.4E-24 145.0 10.5 129 37-165 5-136 (142)
119 3ukn_A Novel protein similar t 99.8 1.7E-19 5.9E-24 155.8 9.9 149 14-168 52-202 (212)
120 2pqq_A Putative transcriptiona 99.8 8.7E-19 3E-23 142.3 13.2 129 37-165 4-132 (149)
121 2z69_A DNR protein; beta barre 99.8 1.2E-18 4.3E-23 142.2 12.4 131 35-165 9-140 (154)
122 2zgd_A 3 repeat synthetic anky 99.8 9.9E-19 3.4E-23 134.4 10.6 87 286-372 23-109 (110)
123 3ocp_A PRKG1 protein; serine/t 99.8 1.7E-18 5.9E-23 138.9 11.7 131 22-157 7-137 (139)
124 3dn7_A Cyclic nucleotide bindi 99.8 2.5E-18 8.7E-23 146.2 11.6 128 37-164 6-134 (194)
125 2zgd_A 3 repeat synthetic anky 99.8 6.3E-18 2.1E-22 129.8 11.0 94 182-275 16-109 (110)
126 3e97_A Transcriptional regulat 99.7 5.2E-18 1.8E-22 148.5 11.8 129 37-165 5-133 (231)
127 4ev0_A Transcription regulator 99.7 5.7E-18 1.9E-22 146.6 11.4 126 40-165 1-126 (216)
128 3dv8_A Transcriptional regulat 99.7 1E-17 3.5E-22 145.4 12.7 128 38-165 3-132 (220)
129 3fx3_A Cyclic nucleotide-bindi 99.7 4.4E-18 1.5E-22 149.5 10.0 132 34-165 7-138 (237)
130 3pna_A CAMP-dependent protein 99.7 1.3E-17 4.6E-22 136.2 12.1 128 25-157 25-152 (154)
131 1zyb_A Transcription regulator 99.7 1.5E-17 5.1E-22 145.6 12.0 131 35-165 15-148 (232)
132 3tnp_B CAMP-dependent protein 99.7 8.2E-18 2.8E-22 159.8 11.0 150 7-157 114-263 (416)
133 3d0s_A Transcriptional regulat 99.7 4.3E-18 1.5E-22 148.5 8.4 129 37-165 5-133 (227)
134 3iwz_A CAP-like, catabolite ac 99.7 3.1E-17 1.1E-21 143.3 12.8 129 37-165 10-144 (230)
135 3dkw_A DNR protein; CRP-FNR, H 99.7 6.3E-18 2.1E-22 147.5 8.0 130 36-165 7-137 (227)
136 1wgp_A Probable cyclic nucleot 99.7 1.6E-17 5.3E-22 132.9 8.6 118 38-156 6-134 (137)
137 3shr_A CGMP-dependent protein 99.7 1.6E-16 5.6E-21 144.6 15.4 146 14-164 15-160 (299)
138 1vp6_A CNBD, cyclic-nucleotide 99.7 4.4E-17 1.5E-21 130.4 10.0 124 36-166 9-132 (138)
139 2gau_A Transcriptional regulat 99.7 3.3E-17 1.1E-21 143.4 9.4 124 42-165 14-137 (232)
140 4ava_A Lysine acetyltransferas 99.7 9.5E-17 3.2E-21 148.4 12.2 128 37-166 12-139 (333)
141 3ryp_A Catabolite gene activat 99.7 1.4E-16 4.9E-21 137.0 12.3 122 44-165 2-124 (210)
142 2oz6_A Virulence factor regula 99.7 4.2E-16 1.4E-20 133.8 13.1 117 49-165 1-121 (207)
143 2d93_A RAP guanine nucleotide 99.7 7.2E-17 2.5E-21 128.5 6.5 116 33-153 11-128 (134)
144 2qcs_B CAMP-dependent protein 99.7 3.8E-16 1.3E-20 141.5 11.8 136 24-164 25-160 (291)
145 1o7f_A CAMP-dependent RAP1 gua 99.7 7.8E-16 2.7E-20 149.1 13.9 142 23-165 27-170 (469)
146 4din_B CAMP-dependent protein 99.6 4.9E-16 1.7E-20 146.0 11.7 137 24-165 116-252 (381)
147 3shr_A CGMP-dependent protein 99.6 2.7E-16 9.2E-21 143.1 9.2 134 33-166 152-286 (299)
148 1o5l_A Transcriptional regulat 99.6 3E-16 1E-20 135.4 8.8 124 42-165 3-127 (213)
149 3kcc_A Catabolite gene activat 99.6 9.1E-16 3.1E-20 136.6 12.0 121 45-165 53-174 (260)
150 2qcs_B CAMP-dependent protein 99.6 6.7E-15 2.3E-19 133.3 14.5 132 33-164 152-284 (291)
151 2fmy_A COOA, carbon monoxide o 99.6 4.2E-16 1.4E-20 135.2 6.1 120 38-165 4-123 (220)
152 3e6c_C CPRK, cyclic nucleotide 99.6 1.3E-15 4.4E-20 134.9 9.2 124 39-165 10-133 (250)
153 1ft9_A Carbon monoxide oxidati 99.6 4.6E-16 1.6E-20 135.2 5.2 119 39-165 1-119 (222)
154 3of1_A CAMP-dependent protein 99.6 1.6E-15 5.5E-20 133.7 8.1 123 36-163 5-127 (246)
155 2bgc_A PRFA; bacterial infecti 99.6 1.6E-14 5.4E-19 126.8 12.1 117 48-165 3-124 (238)
156 4din_B CAMP-dependent protein 99.6 6E-15 2E-19 138.6 9.9 132 32-163 242-374 (381)
157 3tnp_B CAMP-dependent protein 99.6 8.2E-15 2.8E-19 139.1 10.5 129 36-164 265-399 (416)
158 3of1_A CAMP-dependent protein 99.5 1.5E-14 5.2E-19 127.4 9.6 119 32-154 119-237 (246)
159 3la7_A Global nitrogen regulat 99.5 2E-14 6.9E-19 126.5 10.1 115 51-165 30-149 (243)
160 1o7f_A CAMP-dependent RAP1 gua 99.5 3E-13 1E-17 130.9 14.0 121 35-159 334-456 (469)
161 3cf6_E RAP guanine nucleotide 99.5 4.4E-14 1.5E-18 141.7 7.6 143 12-158 6-150 (694)
162 4f7z_A RAP guanine nucleotide 99.5 2.9E-13 9.8E-18 142.6 13.9 142 14-156 16-161 (999)
163 3b02_A Transcriptional regulat 99.4 3.2E-13 1.1E-17 114.6 9.4 94 64-164 2-95 (195)
164 3beh_A MLL3241 protein; transm 99.4 3.5E-14 1.2E-18 132.2 0.0 123 36-165 226-348 (355)
165 2zcw_A TTHA1359, transcription 99.3 1.2E-12 4E-17 111.7 7.0 99 58-164 2-102 (202)
166 4f7z_A RAP guanine nucleotide 99.2 3.4E-11 1.1E-15 126.9 11.8 117 34-154 333-451 (999)
167 3rns_A Cupin 2 conserved barre 79.2 7.5 0.00026 32.6 8.1 71 60-141 38-108 (227)
168 3fjs_A Uncharacterized protein 75.2 15 0.0005 26.8 7.9 66 61-137 38-103 (114)
169 2ozj_A Cupin 2, conserved barr 70.7 13 0.00044 26.9 6.7 67 62-139 41-107 (114)
170 1yhf_A Hypothetical protein SP 68.8 24 0.00084 25.2 7.9 67 62-139 43-109 (115)
171 4g26_A Pentatricopeptide repea 66.7 16 0.00053 34.9 7.9 141 192-339 31-197 (501)
172 3lwc_A Uncharacterized protein 65.9 14 0.0005 27.2 6.0 45 62-113 43-87 (119)
173 3kvp_A Uncharacterized protein 64.3 10 0.00036 24.6 4.0 26 80-105 30-55 (72)
174 2xp1_A SPT6; transcription, IW 64.1 25 0.00087 28.1 7.4 40 38-84 10-49 (178)
175 2pfw_A Cupin 2, conserved barr 62.0 36 0.0012 24.4 7.6 68 61-139 36-103 (116)
176 3rns_A Cupin 2 conserved barre 54.0 36 0.0012 28.3 7.1 66 62-138 156-222 (227)
177 4e2g_A Cupin 2 conserved barre 52.1 25 0.00085 25.8 5.3 47 61-113 43-89 (126)
178 4g26_A Pentatricopeptide repea 50.9 35 0.0012 32.4 7.3 101 203-307 90-198 (501)
179 1fxz_A Glycinin G1; proglycini 50.7 27 0.00094 32.9 6.3 52 62-113 341-393 (476)
180 1dgw_A Canavalin; duplicated s 49.6 21 0.00073 28.4 4.8 51 61-113 43-93 (178)
181 2vqa_A SLL1358 protein, MNCA; 49.3 31 0.0011 31.0 6.4 51 62-113 55-106 (361)
182 1o5u_A Novel thermotoga mariti 49.1 40 0.0014 23.9 5.7 45 62-113 34-78 (101)
183 2d5f_A Glycinin A3B4 subunit; 48.9 32 0.0011 32.6 6.5 55 59-113 367-422 (493)
184 2fqp_A Hypothetical protein BP 48.9 20 0.00069 25.0 4.1 47 63-113 22-69 (97)
185 1fi2_A Oxalate oxidase, germin 48.7 42 0.0014 27.2 6.6 52 62-113 75-129 (201)
186 3c3v_A Arachin ARAH3 isoform; 48.2 29 0.00099 33.0 6.0 54 60-113 373-427 (510)
187 2gu9_A Tetracenomycin polyketi 46.5 32 0.0011 24.3 5.0 46 62-113 24-72 (113)
188 1j58_A YVRK protein; cupin, de 45.7 36 0.0012 30.9 6.3 51 62-113 82-132 (385)
189 2vqa_A SLL1358 protein, MNCA; 43.7 47 0.0016 29.7 6.7 51 62-113 237-288 (361)
190 2qjv_A Uncharacterized IOLB-li 43.0 1.2E+02 0.0041 26.0 8.5 76 60-139 30-108 (270)
191 3fz3_A Prunin; TREE NUT allerg 42.7 48 0.0016 31.6 6.5 54 60-113 395-449 (531)
192 3ibm_A Cupin 2, conserved barr 42.4 32 0.0011 27.0 4.7 46 62-113 59-104 (167)
193 1v70_A Probable antibiotics sy 41.7 50 0.0017 22.7 5.4 46 62-113 31-77 (105)
194 1gp8_A Protein (scaffolding pr 40.3 20 0.00068 20.3 2.1 17 227-243 17-33 (40)
195 2pyt_A Ethanolamine utilizatio 38.9 78 0.0027 23.7 6.2 43 63-113 61-103 (133)
196 2oa2_A BH2720 protein; 1017534 36.3 67 0.0023 24.3 5.6 51 63-113 47-98 (148)
197 3es4_A Uncharacterized protein 36.2 36 0.0012 25.0 3.7 44 64-113 47-90 (116)
198 3bcw_A Uncharacterized protein 35.9 34 0.0012 25.4 3.6 44 64-113 54-97 (123)
199 3zrh_A Ubiquitin thioesterase 35.8 86 0.0029 28.6 6.7 66 292-376 27-92 (454)
200 3h7j_A Bacilysin biosynthesis 35.5 73 0.0025 26.7 6.2 46 63-114 149-195 (243)
201 1j58_A YVRK protein; cupin, de 34.4 61 0.0021 29.3 5.9 52 62-114 260-312 (385)
202 3es1_A Cupin 2, conserved barr 33.1 42 0.0014 26.6 3.9 47 62-113 82-128 (172)
203 2f4p_A Hypothetical protein TM 33.0 58 0.002 24.8 4.7 47 62-113 51-97 (147)
204 3h8u_A Uncharacterized conserv 32.9 42 0.0014 24.4 3.8 48 61-113 41-89 (125)
205 2e9q_A 11S globulin subunit be 32.6 85 0.0029 29.4 6.5 54 60-113 323-377 (459)
206 4b29_A Dimethylsulfoniopropion 32.5 77 0.0026 26.2 5.5 74 35-113 88-181 (217)
207 3kgz_A Cupin 2 conserved barre 32.2 34 0.0012 26.6 3.3 45 63-113 48-92 (156)
208 2bnm_A Epoxidase; oxidoreducta 32.0 1.2E+02 0.0041 24.1 6.8 49 63-113 121-172 (198)
209 2b8m_A Hypothetical protein MJ 32.0 41 0.0014 24.2 3.6 46 63-113 31-76 (117)
210 1vj2_A Novel manganese-contain 31.9 52 0.0018 24.1 4.2 46 62-113 51-96 (126)
211 1sfn_A Conserved hypothetical 31.7 1.6E+02 0.0054 24.6 7.7 44 62-113 53-96 (246)
212 1o4t_A Putative oxalate decarb 31.1 64 0.0022 23.9 4.6 46 62-113 60-106 (133)
213 3d0j_A Uncharacterized protein 31.0 55 0.0019 24.9 4.0 63 75-142 46-110 (140)
214 3d82_A Cupin 2, conserved barr 30.9 88 0.003 21.4 5.2 50 80-140 51-100 (102)
215 1y9q_A Transcriptional regulat 30.7 78 0.0027 25.1 5.4 44 64-113 109-154 (192)
216 3jzv_A Uncharacterized protein 30.7 35 0.0012 26.8 3.1 45 63-113 57-101 (166)
217 1sfn_A Conserved hypothetical 30.7 51 0.0017 27.8 4.4 48 60-113 166-214 (246)
218 2cav_A Protein (canavalin); vi 30.0 47 0.0016 31.0 4.3 50 62-113 89-138 (445)
219 4e2q_A Ureidoglycine aminohydr 30.0 83 0.0029 26.9 5.6 70 62-142 73-143 (266)
220 2vpv_A Protein MIF2, MIF2P; nu 29.6 70 0.0024 25.2 4.6 30 79-114 110-139 (166)
221 1yfu_A 3-hydroxyanthranilate-3 29.5 63 0.0021 25.6 4.3 36 78-115 54-89 (174)
222 3h7j_A Bacilysin biosynthesis 29.0 76 0.0026 26.5 5.2 47 61-113 36-82 (243)
223 1zvf_A 3-hydroxyanthranilate 3 28.7 74 0.0025 25.2 4.5 59 77-141 52-113 (176)
224 3nw4_A Gentisate 1,2-dioxygena 28.6 1E+02 0.0034 27.9 6.0 74 64-148 284-357 (368)
225 1lr5_A Auxin binding protein 1 28.4 54 0.0019 25.3 3.9 52 62-113 44-98 (163)
226 3kgl_A Cruciferin; 11S SEED gl 28.3 69 0.0024 30.0 5.1 52 62-113 326-378 (466)
227 2q1z_B Anti-sigma factor CHRR, 28.3 90 0.0031 25.2 5.3 45 60-114 126-170 (195)
228 3ksc_A LEGA class, prolegumin; 27.3 73 0.0025 30.1 5.1 53 61-113 360-413 (496)
229 3qac_A 11S globulin SEED stora 27.3 79 0.0027 29.6 5.3 52 62-113 326-378 (465)
230 2e9q_A 11S globulin subunit be 27.3 74 0.0025 29.8 5.1 62 52-113 56-137 (459)
231 2i45_A Hypothetical protein; n 27.2 1.1E+02 0.0036 21.4 5.1 54 80-144 49-103 (107)
232 4axo_A EUTQ, ethanolamine util 27.1 1.4E+02 0.0049 22.9 6.0 29 79-113 84-112 (151)
233 1uij_A Beta subunit of beta co 25.9 58 0.002 30.0 4.1 51 61-113 51-101 (416)
234 3mkq_B Coatomer subunit alpha; 25.8 1.6E+02 0.0053 23.4 6.1 105 191-309 9-115 (177)
235 4i4a_A Similar to unknown prot 25.7 71 0.0024 23.2 4.0 80 62-152 37-120 (128)
236 2phl_A Phaseolin; plant SEED s 25.5 64 0.0022 29.6 4.2 50 61-112 54-103 (397)
237 3or8_A Transcription elongatio 25.4 88 0.003 25.4 4.6 36 43-83 8-44 (197)
238 2o1q_A Putative acetyl/propion 25.1 41 0.0014 25.7 2.6 51 61-115 46-96 (145)
239 3bu7_A Gentisate 1,2-dioxygena 24.4 59 0.002 29.7 3.8 75 62-147 297-374 (394)
240 2d40_A Z3393, putative gentisa 24.2 1.9E+02 0.0066 25.8 7.2 73 63-146 272-344 (354)
241 2ea7_A 7S globulin-1; beta bar 24.1 70 0.0024 29.7 4.3 51 61-113 63-113 (434)
242 3l2h_A Putative sugar phosphat 24.0 65 0.0022 24.8 3.6 46 62-113 49-96 (162)
243 1sq4_A GLXB, glyoxylate-induce 23.9 82 0.0028 27.1 4.5 49 59-113 191-240 (278)
244 2q30_A Uncharacterized protein 23.7 1.1E+02 0.0038 21.2 4.6 47 62-113 36-84 (110)
245 1sef_A Conserved hypothetical 23.7 79 0.0027 27.1 4.4 46 62-113 185-231 (274)
246 2opk_A Hypothetical protein; p 23.2 71 0.0024 22.9 3.4 32 78-113 52-83 (112)
247 3i7d_A Sugar phosphate isomera 23.0 69 0.0024 24.9 3.5 46 62-113 46-93 (163)
248 1fxz_A Glycinin G1; proglycini 22.8 1E+02 0.0035 29.0 5.2 70 44-114 34-124 (476)
249 3lag_A Uncharacterized protein 22.2 34 0.0012 24.1 1.4 49 62-113 20-69 (98)
250 3zrh_A Ubiquitin thioesterase 21.5 1.8E+02 0.0061 26.6 6.1 63 262-341 28-90 (454)
251 3cew_A Uncharacterized cupin p 20.9 93 0.0032 22.5 3.8 45 63-113 30-76 (125)
252 2qnk_A 3-hydroxyanthranilate 3 20.7 1.9E+02 0.0064 24.9 5.8 67 68-142 38-107 (286)
253 3mkq_B Coatomer subunit alpha; 20.6 3.2E+02 0.011 21.6 7.2 129 225-375 10-140 (177)
254 3bb6_A Uncharacterized protein 20.5 1.8E+02 0.0062 21.6 5.1 52 81-137 41-94 (127)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.9e-39 Score=289.48 Aligned_cols=210 Identities=24% Similarity=0.245 Sum_probs=186.1
Q ss_pred CcchhhHhhhHHHhhccCCHHHHHHHHHcCCC---ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHH
Q 015680 184 GKHEAELALRFNSAAYHGDLYQLKGLIRAGAD---LNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPL 260 (403)
Q Consensus 184 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 260 (403)
+..+..|.||||+|+..|+.+++++|++.|++ ++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL 82 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTAL 82 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 34567889999999999999999999999988 788899999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHcCCC-----------------------------------------------ccc--cCCCchH
Q 015680 261 LEAIKCGHDGVTSLLVKEGAS-----------------------------------------------LNV--DDAGSFL 291 (403)
Q Consensus 261 ~~A~~~~~~~~v~~L~~~~~~-----------------------------------------------~~~--~~~~~~l 291 (403)
|+|+..|+.+++++|++++++ ++. ..|.|||
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 162 (282)
T 1oy3_D 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPL 162 (282)
T ss_dssp HHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHH
T ss_pred HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHH
Confidence 999999999999999998765 222 2477999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCC-CChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHH
Q 015680 292 CIAVARGDSDLLKRVLSNGVDPNSRDYD-HRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIK 370 (403)
Q Consensus 292 ~~a~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~ 370 (403)
|+|+..|+.+++++|+++|++++..+.. |+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.++++
T Consensus 163 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~ 242 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR 242 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHH
Confidence 9999999999999999999999999854 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccccccccccccccchhhhh
Q 015680 371 LLEDAKCTQLSEFHYCSQGMIGIA 394 (403)
Q Consensus 371 ~Ll~~~~~~~~~~~~~~~~~~~~~ 394 (403)
+|+++|++..... ..+.+++.++
T Consensus 243 ~Ll~~ga~~~~~~-~~g~tpl~~a 265 (282)
T 1oy3_D 243 LLRAHGAPEPEDG-GDKLSPCSSS 265 (282)
T ss_dssp HHHHTTCCCCCCC-----------
T ss_pred HHHHcCCCcCcCC-Cccccccccc
Confidence 9999999866543 4445555554
No 2
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=282.25 Aligned_cols=203 Identities=25% Similarity=0.273 Sum_probs=182.3
Q ss_pred hHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCC
Q 015680 189 ELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 268 (403)
Q Consensus 189 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~ 268 (403)
.|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 81 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCccccC-CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcc
Q 015680 269 DGVTSLLVKEGASLNVDD-AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF 347 (403)
Q Consensus 269 ~~~v~~L~~~~~~~~~~~-~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~ 347 (403)
.+++++|+++|++++..+ +.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 82 WDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 999999999999887543 7799999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccccccchhhh
Q 015680 348 TKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHYCSQGMIGI 393 (403)
Q Consensus 348 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 393 (403)
. +..|.||||+|+.+++.+++++|+++|++.-... ..+.+++.+
T Consensus 162 ~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~tpl~~ 205 (261)
T 2xai_A 162 Q-GKGQDSPLHAVARTASEELACLLMDFGADTQAKN-AEGKRPVEL 205 (261)
T ss_dssp C-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCGGGG
T ss_pred C-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcC-CCCCChhhh
Confidence 5 8889999999999999999999999999865443 333444443
No 3
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.3e-38 Score=284.16 Aligned_cols=194 Identities=28% Similarity=0.336 Sum_probs=150.1
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCC-CCCcCCCCCCcHHHHHH
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGV-DINIKDKFGNTPLLEAI 264 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~A~ 264 (403)
.+..+.||||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|++.+. +++.++..|.||||+|+
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 132 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 132 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHH
Confidence 35567778888888888888888888888887777778888888888888888888887776 77777777888888888
Q ss_pred HcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHc
Q 015680 265 KCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEA 342 (403)
Q Consensus 265 ~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 342 (403)
..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++
T Consensus 133 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 212 (253)
T 1yyh_A 133 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212 (253)
T ss_dssp HHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 8888888888888877777655 56788888888888888888888888888787888888888888888888888888
Q ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 343 GASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 343 g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
|++++.+|..|.||+|+|+.+|+.+|+++|.+....+
T Consensus 213 ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~ 249 (253)
T 1yyh_A 213 FANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249 (253)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-----
T ss_pred CCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Confidence 8888888888888888888888888888877665543
No 4
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=9.5e-38 Score=272.98 Aligned_cols=197 Identities=28% Similarity=0.339 Sum_probs=188.1
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCC-CCCcCCCCCCcHHHHHH
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGV-DINIKDKFGNTPLLEAI 264 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~A~ 264 (403)
.+..+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~ 100 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA 100 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH
Confidence 36678999999999999999999999999999999999999999999999999999999987 89999999999999999
Q ss_pred HcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHc
Q 015680 265 KCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEA 342 (403)
Q Consensus 265 ~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 342 (403)
..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++
T Consensus 101 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 180 (223)
T 2f8y_A 101 RLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 180 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999998766 77999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 343 GASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 343 g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
|++++.+|..|.||+|+|+.+++.+++++|+++|+....+
T Consensus 181 ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 181 FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC-
T ss_pred CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcccc
Confidence 9999999999999999999999999999999999975543
No 5
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.2e-37 Score=275.61 Aligned_cols=215 Identities=22% Similarity=0.257 Sum_probs=192.2
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHH----cCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIR----AGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPL 260 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~----~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l 260 (403)
..+.+|.||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.|||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 83 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAA 83 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 457788999999999999999999997 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHcCC----Ccccc--CCCchHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHHHHcCcH
Q 015680 261 LEAIKCGHDGVTSLLVKEGA----SLNVD--DAGSFLCIAVARGDSDLLKRVLSNGVDPNSRD-YDHRTPLHVAASEGLY 333 (403)
Q Consensus 261 ~~A~~~~~~~~v~~L~~~~~----~~~~~--~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~Lh~A~~~~~~ 333 (403)
|+|+..|+.+++++|++++. +++.. ++.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCH
Confidence 99999999999999999987 55554 47799999999999999999999999999998 7899999999999999
Q ss_pred HHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc--------cccchhhhhhhhcc
Q 015680 334 LMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHY--------CSQGMIGIAENLLL 399 (403)
Q Consensus 334 ~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~~~~l~~ 399 (403)
+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|++....... ...+..++++.|+.
T Consensus 164 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 164 SMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp HHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999986543322 44556677776654
No 6
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3e-38 Score=277.72 Aligned_cols=194 Identities=27% Similarity=0.385 Sum_probs=168.5
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAI 264 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 264 (403)
..+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 114 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAA 114 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 34566788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHc
Q 015680 265 KCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEA 342 (403)
Q Consensus 265 ~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 342 (403)
..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 115 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 194 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ 194 (231)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC
Confidence 8888888888888888887755 66888888888888888888888888888888888888888888888888888888
Q ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 015680 343 GASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCT 378 (403)
Q Consensus 343 g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 378 (403)
|++++.+|..|.||+|+|+..++.+++++|+++|++
T Consensus 195 ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 195 GASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 888888888888888888888888888888888764
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=283.23 Aligned_cols=198 Identities=26% Similarity=0.278 Sum_probs=188.6
Q ss_pred CcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q 015680 184 GKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 263 (403)
Q Consensus 184 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A 263 (403)
...+..+.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A 132 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA 132 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHcCCCccccC-CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHc
Q 015680 264 IKCGHDGVTSLLVKEGASLNVDD-AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEA 342 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~~~~~~~~~-~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 342 (403)
+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 212 (285)
T 3d9h_A 133 CVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 212 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC
Confidence 99999999999999999987544 78999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 343 GASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 343 g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
|++++. +..|.||||+|+.+++.+++++|+++|++.-..
T Consensus 213 ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 251 (285)
T 3d9h_A 213 GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAK 251 (285)
T ss_dssp TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 999984 889999999999999999999999999986544
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.3e-38 Score=279.00 Aligned_cols=215 Identities=26% Similarity=0.281 Sum_probs=165.6
Q ss_pred cchhhHhhhHHHhhccC-------------CHHHHHHHHHcCCCccc-cCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCC
Q 015680 185 KHEAELALRFNSAAYHG-------------DLYQLKGLIRAGADLNK-TDYDGRSPLHLATSRGYEDITLFLIQKGVDIN 250 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~-------------~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~ 250 (403)
..+.+|.||||+|+..| +.+++++|++.|++++. .+..|+||||+|+..|+.+++++|++.|++++
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 84 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADAN 84 (253)
T ss_dssp -----------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 34678999999999987 99999999999999865 58999999999999999999999999999999
Q ss_pred cCCCCCCcHHHHHHHcCChHHHHHHHHcCC-Ccccc--CCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q 015680 251 IKDKFGNTPLLEAIKCGHDGVTSLLVKEGA-SLNVD--DAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVA 327 (403)
Q Consensus 251 ~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~-~~~~~--~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A 327 (403)
.+|..|+||||+|+..|+.+++++|++++. +++.. +|.||||+|+..|+.+++++|++.|++++..|..|+||||+|
T Consensus 85 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 85 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWA 164 (253)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 999999999999999999999999999986 66664 478999999999999999999999999999999999999999
Q ss_pred HHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc--------cccchhhhhhhhcc
Q 015680 328 ASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHY--------CSQGMIGIAENLLL 399 (403)
Q Consensus 328 ~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~~~~l~~ 399 (403)
+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|++.-..... ...+..+++++|..
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986544322 44556666666654
No 9
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.8e-37 Score=273.89 Aligned_cols=211 Identities=26% Similarity=0.281 Sum_probs=194.4
Q ss_pred cCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHH
Q 015680 183 IGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE 262 (403)
Q Consensus 183 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 262 (403)
+...+..+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHL 83 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Confidence 34556678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHcC-CCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHH
Q 015680 263 AIKCGHDGVTSLLVKEG-ASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLL 339 (403)
Q Consensus 263 A~~~~~~~~v~~L~~~~-~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~L 339 (403)
|+..|+.+++++|++++ .+++..+ |.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 163 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999998 6776654 77999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccccccchhhhh
Q 015680 340 LEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHYCSQGMIGIA 394 (403)
Q Consensus 340 l~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 394 (403)
+++|++++.+|..|.||||+|+.+++.+++++|+++|++..... ..+.+++.++
T Consensus 164 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d-~~g~t~l~~A 217 (237)
T 3b7b_A 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKN-KEGETPLQCA 217 (237)
T ss_dssp HTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-TTSCCHHHHS
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccC-CCCCCHHHHH
Confidence 99999999999999999999999999999999999999865543 3445555443
No 10
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=8.3e-38 Score=275.14 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=181.5
Q ss_pred hHhhhHHHhhccCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCC-----CcCCCCCCcHHHH
Q 015680 189 ELALRFNSAAYHGDLYQLKGLIRA-GADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDI-----NIKDKFGNTPLLE 262 (403)
Q Consensus 189 ~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~-----~~~~~~g~t~l~~ 262 (403)
.|.||||.|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|++.|+++ +..|..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 367899999999999999999998 8999999999999999999999999999999999886 6678899999999
Q ss_pred HHHcCChHHHHHHHHcCCCcccc---------------CCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q 015680 263 AIKCGHDGVTSLLVKEGASLNVD---------------DAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVA 327 (403)
Q Consensus 263 A~~~~~~~~v~~L~~~~~~~~~~---------------~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A 327 (403)
|+..|+.+++++|+++|++++.. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 99999999999999999998875 478999999999999999999999999999999999999999
Q ss_pred HHcCcHHHH----HHHHHcCCCc------ccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 328 ASEGLYLMA----KLLLEAGASV------FTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 328 ~~~~~~~~~----~~Ll~~g~d~------~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
+..|+.+++ ++|+++|+++ +.+|..|.||||+|+.+|+.+++++|+++|++...+
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhh
Confidence 999999988 9999999988 589999999999999999999999999999876544
No 11
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.2e-37 Score=287.90 Aligned_cols=236 Identities=24% Similarity=0.272 Sum_probs=203.0
Q ss_pred hHHHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCc
Q 015680 156 RKVLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGY 235 (403)
Q Consensus 156 ~~ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~ 235 (403)
...+..+...+..+....++.. ........+..+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~ 103 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTP-LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGH 103 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCT-TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHcCCHHHHHHHHHh-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCC
Confidence 3344444444444433333321 223344556778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCcccc------------------------------
Q 015680 236 EDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD------------------------------ 285 (403)
Q Consensus 236 ~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~------------------------------ 285 (403)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 104 ~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~ 183 (351)
T 3utm_A 104 YEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLL 183 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHH
Confidence 99999999999999999999999999999999999999999999887642
Q ss_pred --------------------------CCCchHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHH
Q 015680 286 --------------------------DAGSFLCIAVAR---GDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMA 336 (403)
Q Consensus 286 --------------------------~~~~~l~~a~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~ 336 (403)
.+.||+|+|+.. ++.+++++|++.|++++.+|..|.||||+|+..|+.+++
T Consensus 184 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v 263 (351)
T 3utm_A 184 QAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263 (351)
T ss_dssp HHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHH
Confidence 356999999999 558999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccccccchhhh
Q 015680 337 KLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHYCSQGMIGI 393 (403)
Q Consensus 337 ~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 393 (403)
++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|+++-... ..+.+++.+
T Consensus 264 ~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~-~~g~tal~~ 319 (351)
T 3utm_A 264 EVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIIS-LQGFTAAQM 319 (351)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-TTSCCHHHH
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC-CCCCChhhh
Confidence 99999999999999999999999999999999999999999866554 334455444
No 12
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-38 Score=281.11 Aligned_cols=231 Identities=24% Similarity=0.309 Sum_probs=170.8
Q ss_pred hHhHHHHHHHHhhcchHHHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHH-HHHHHHHcCCCcccc
Q 015680 141 KQSFTSILEIYFCDGRKVLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLY-QLKGLIRAGADLNKT 219 (403)
Q Consensus 141 ~~~~~~l~~~~~~~~~~ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~ll~~~~~~~~~ 219 (403)
.+...+++.+.......+++.+++.+..... +........+..+.+||+.|+..++.+ +++.|++.|+++|..
T Consensus 9 ~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~------~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~ 82 (269)
T 4b93_B 9 YREVEKLLRAVADGDLEMVRYLLEWTEEDLE------DAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVT 82 (269)
T ss_dssp CHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------------CCCCTTCC
T ss_pred ccchhHHHHHHHcCCHHHHHHHHHCCCcccc------cccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCc
Confidence 3456677776666666777777765543211 111223445677889999999988764 789999999999999
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHc
Q 015680 220 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVAR 297 (403)
Q Consensus 220 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~ 297 (403)
|..|+||||+|+..|+.+++++|++.|++++.++..|.||+|+|+..++.+++++|+++|++++..+ |.||||+|+..
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 9999999999999999999999999999999999999999999999999999999999999999865 77999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCC-HHHHHHHHHcc
Q 015680 298 GDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN-KNLIKLLEDAK 376 (403)
Q Consensus 298 ~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~-~~~v~~Ll~~~ 376 (403)
|+.+++++|++.|++++.++..|+||||+|+..|+.++|++|+++|+|++.+|.+|.||||+|+.+++ .+++++|.+.+
T Consensus 163 g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~ 242 (269)
T 4b93_B 163 GHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCV 242 (269)
T ss_dssp TCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC-----
T ss_pred CCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999998886 35666666655
Q ss_pred c
Q 015680 377 C 377 (403)
Q Consensus 377 ~ 377 (403)
+
T Consensus 243 ~ 243 (269)
T 4b93_B 243 A 243 (269)
T ss_dssp -
T ss_pred h
Confidence 5
No 13
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=9.7e-38 Score=283.44 Aligned_cols=214 Identities=21% Similarity=0.116 Sum_probs=196.3
Q ss_pred CcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q 015680 184 GKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 263 (403)
Q Consensus 184 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A 263 (403)
...+..|.||||+|+..|+.+++++|++.|++++..+ |+||||+|+..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Confidence 4557788999999999999999999999999998774 89999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHcCCCccccC--C-CchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHH
Q 015680 264 IKCGHDGVTSLLVKEGASLNVDD--A-GSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLL 340 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~~~~~~~~~--~-~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll 340 (403)
+..|+.+++++|+++|++++..+ | .||||+|+..|+.+++++|+++|++.... ..|.||||+|+..|+.+++++|+
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHH
Confidence 99999999999999999999876 4 69999999999999999999999877332 28999999999999999999999
Q ss_pred HcCCCcccCCCCCCCH-HHHHHHcCCHHHHHHHHHccccccccc-cccccchhhhhhhhccc
Q 015680 341 EAGASVFTKDRWGNTP-LDEGRMCGNKNLIKLLEDAKCTQLSEF-HYCSQGMIGIAENLLLL 400 (403)
Q Consensus 341 ~~g~d~~~~~~~g~t~-l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~l~~~ 400 (403)
++|++++.+|..|.|| ||+|+.+|+.+++++|+++|++.-... .....+..++++.|+.-
T Consensus 182 ~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~a~~~~~~~iv~~Ll~~ 243 (285)
T 3kea_A 182 DYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANLENVLLDDAEIAKMIIEK 243 (285)
T ss_dssp HHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTGGGGTTTCHHHHHHHHHH
T ss_pred HcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCChhhhhcCCHHHHHHHHHc
Confidence 9999999999999998 999999999999999999999866543 34667889999998753
No 14
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-36 Score=273.39 Aligned_cols=214 Identities=26% Similarity=0.268 Sum_probs=182.8
Q ss_pred hhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHc
Q 015680 187 EAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKC 266 (403)
Q Consensus 187 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~ 266 (403)
+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence 45577899999999999999999999999988888999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHcCCCcccc------------CCCchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHHHHcCc-
Q 015680 267 GHDGVTSLLVKEGASLNVD------------DAGSFLCIAVARGDSDLLKRVLSN-GVDPNSRDYDHRTPLHVAASEGL- 332 (403)
Q Consensus 267 ~~~~~v~~L~~~~~~~~~~------------~~~~~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~Lh~A~~~~~- 332 (403)
|+.+++++|+++|++++.. .+.||||+|+..|+.+++++|++. |++++..|..|.||||+|+..++
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~ 195 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD 195 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT
T ss_pred CCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc
Confidence 9999999999998888754 366899999999999999999987 89999999999999999999888
Q ss_pred ---HHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-ccccccccccc--------cccchhhhhhhhccc
Q 015680 333 ---YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED-AKCTQLSEFHY--------CSQGMIGIAENLLLL 400 (403)
Q Consensus 333 ---~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~--------~~~~~~~~~~~l~~~ 400 (403)
.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|++ +|++.-..... ...+..+++++|+..
T Consensus 196 ~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~ 275 (285)
T 1wdy_A 196 SDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275 (285)
T ss_dssp TTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHc
Confidence 889999999999999999999999999999999999999998 67654433211 344566777777653
No 15
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.3e-37 Score=275.28 Aligned_cols=223 Identities=20% Similarity=0.211 Sum_probs=191.5
Q ss_pred chHHHHHhhhccccchhhhhccc--ceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHH
Q 015680 155 GRKVLTNLLEGKESNLRLKQVES--DITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATS 232 (403)
Q Consensus 155 ~~~ll~~ll~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~ 232 (403)
+...++.+...+..++...+++. .........+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 88 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 34444444444444333333220 1122334456778999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHhcCC----CCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC---CCchHHHHHHcCCHHHHHH
Q 015680 233 RGYEDITLFLIQKGV----DINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---AGSFLCIAVARGDSDLLKR 305 (403)
Q Consensus 233 ~~~~~~~~~Ll~~~~----~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~---~~~~l~~a~~~~~~~~v~~ 305 (403)
.|+.+++++|++.++ +++..+..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++
T Consensus 89 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 168 (241)
T 1k1a_A 89 HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQL 168 (241)
T ss_dssp TTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHH
Confidence 999999999999987 889999999999999999999999999999999998755 7899999999999999999
Q ss_pred HHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 015680 306 VLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKC 377 (403)
Q Consensus 306 Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 377 (403)
|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.++++.|.+.++
T Consensus 169 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 169 LLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240 (241)
T ss_dssp HHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998765
No 16
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.7e-36 Score=260.66 Aligned_cols=188 Identities=26% Similarity=0.339 Sum_probs=178.3
Q ss_pred hHhhhHHHhhccCCHHHHHHHHHcCC-CccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcC
Q 015680 189 ELALRFNSAAYHGDLYQLKGLIRAGA-DLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 267 (403)
Q Consensus 189 ~~~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~ 267 (403)
.+.++||.|+..|+.+.++.++..+. +++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 83 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQG 83 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 35689999999999999999999885 89999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHH-HcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCChHHHHHHHcCc-----HHHHHH
Q 015680 268 HDGVTSLLV-KEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNG-VDPNSRDYDHRTPLHVAASEGL-----YLMAKL 338 (403)
Q Consensus 268 ~~~~v~~L~-~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~Lh~A~~~~~-----~~~~~~ 338 (403)
+.+++++|+ ..+.+++..+ +.||||+|+..|+.+++++|++.| ++++..|..|.||||+|+..++ .+++++
T Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~ 163 (201)
T 3hra_A 84 RTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKL 163 (201)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHH
T ss_pred CHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHH
Confidence 999999999 4566777655 679999999999999999999999 9999999999999999999987 999999
Q ss_pred HHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 015680 339 LLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAK 376 (403)
Q Consensus 339 Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 376 (403)
|+++|++++.+|..|.||||+|+.+|+.+++++|+++|
T Consensus 164 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 164 LMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999999999999999999886
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.5e-36 Score=264.77 Aligned_cols=204 Identities=26% Similarity=0.283 Sum_probs=184.2
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCCcc-ccCCCCCcHHHHHHHcCcHHHHHHHHhcC--CCCCc-CCCCCCcHHHHHHH
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGADLN-KTDYDGRSPLHLATSRGYEDITLFLIQKG--VDINI-KDKFGNTPLLEAIK 265 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~--~~~~~-~~~~g~t~l~~A~~ 265 (403)
|.||||.|+..|+.+++++|++.++++. ..+..|.||||+|+..|+.+++++|++.| ++++. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 4689999999999999999999998765 47899999999999999999999999999 55665 78899999999999
Q ss_pred cCChHHHHHHHHcC--CCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHH
Q 015680 266 CGHDGVTSLLVKEG--ASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLE 341 (403)
Q Consensus 266 ~~~~~~v~~L~~~~--~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 341 (403)
.|+.+++++|+++| ++++..+ |.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 161 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG 161 (228)
T ss_dssp HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999998 7777654 7799999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCcccCCCCCCCHHHHHHHcCCHHHHHHHH-Hccccccccccccccchhhhh
Q 015680 342 AG-ASVFTKDRWGNTPLDEGRMCGNKNLIKLLE-DAKCTQLSEFHYCSQGMIGIA 394 (403)
Q Consensus 342 ~g-~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~~~~~~ 394 (403)
+| ++++.+|..|.||||+|+..|+.+++++|+ ++|++..... ..+.++++++
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~-~~g~t~l~~A 215 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVA 215 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC-TTSCBGGGGC
T ss_pred cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccC-CCCCcHHHHH
Confidence 99 999999999999999999999999999999 8899866543 3344555443
No 18
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7e-37 Score=287.71 Aligned_cols=221 Identities=19% Similarity=0.128 Sum_probs=165.1
Q ss_pred chHHHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcC
Q 015680 155 GRKVLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRG 234 (403)
Q Consensus 155 ~~~ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~ 234 (403)
+...++.+...+..++...+++...+ .+..+..+.||||+|+..|+.+++++|++.|++++. ..|.||||+|+..|
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcC
Confidence 45555666666665555555554332 334455566677777777777777777777664432 35667777777777
Q ss_pred cHHHHHHHHhc----CCCCCc-----------------CCCCCCcHHHHHHHcC--ChHHHHHHHHcCCCccccC--CCc
Q 015680 235 YEDITLFLIQK----GVDINI-----------------KDKFGNTPLLEAIKCG--HDGVTSLLVKEGASLNVDD--AGS 289 (403)
Q Consensus 235 ~~~~~~~Ll~~----~~~~~~-----------------~~~~g~t~l~~A~~~~--~~~~v~~L~~~~~~~~~~~--~~~ 289 (403)
+.+++++|++. |++++. .|..|.||||+|+..| +.+++++|+++|++++..+ |.|
T Consensus 96 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t 175 (364)
T 3ljn_A 96 KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADET 175 (364)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCC
Confidence 77777777766 555555 7777888888888888 8888888888888877765 568
Q ss_pred hHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcC
Q 015680 290 FLCIAVARGDSDLLKRVLSNGVD-----PNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG 364 (403)
Q Consensus 290 ~l~~a~~~~~~~~v~~Ll~~~~~-----~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~ 364 (403)
|||+|+..|+.+++++|++.|++ ++..|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..|
T Consensus 176 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 176 PLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence 88888888888888888888877 8888888888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHccccc
Q 015680 365 NKNLIKLLEDAKCTQ 379 (403)
Q Consensus 365 ~~~~v~~Ll~~~~~~ 379 (403)
+.+++++|+++|++.
T Consensus 256 ~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 256 MVLLTKELLQKTDVF 270 (364)
T ss_dssp CHHHHHHHHHHSCHH
T ss_pred hHHHHHHHHHcCCch
Confidence 888888888887653
No 19
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-37 Score=275.23 Aligned_cols=197 Identities=24% Similarity=0.293 Sum_probs=158.0
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCCC--------ccccCCCCCcHHHHHHHcCcH-HHHHHHHhcCCCCCcCCCCC
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGAD--------LNKTDYDGRSPLHLATSRGYE-DITLFLIQKGVDINIKDKFG 256 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~--------~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~~~~~~~~~~~g 256 (403)
.+..+.++|+.|+..|+.++|++|++.+++ ++..+..+.||||.|+..+.. .++++|++.|+++|.+|..|
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G 86 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDG 86 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTS
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCC
Confidence 455678899999999999999999998865 455677899999999988765 58899999999999999999
Q ss_pred CcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHH
Q 015680 257 NTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYL 334 (403)
Q Consensus 257 ~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 334 (403)
+||||+|+..|+.+++++|++++++++..+ |.||+|+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~ 166 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHE 166 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGG
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 999999999999999999999999988765 679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 335 MAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 335 ~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
++++|+++|+|++.++..|.||||+|+.+|+.++|++|+++|++.-..
T Consensus 167 ~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~ 214 (269)
T 4b93_B 167 LVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVL 214 (269)
T ss_dssp GHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred HHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 999999999999999999999999999999999999999999986544
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.9e-36 Score=264.19 Aligned_cols=204 Identities=30% Similarity=0.363 Sum_probs=187.7
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCC
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGAD-LNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 268 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~ 268 (403)
+.++|+.|+..|+.+.++++++.+.. ++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 85 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGX 85 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCH
Confidence 45789999999999999999998754 67788999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCc
Q 015680 269 DGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASV 346 (403)
Q Consensus 269 ~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~ 346 (403)
.+++++|+++|++++..+ |.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|+++
T Consensus 86 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 165 (231)
T 3aji_A 86 DEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165 (231)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Confidence 999999999999998765 679999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccccccchhhhh
Q 015680 347 FTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHYCSQGMIGIA 394 (403)
Q Consensus 347 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 394 (403)
+.+|..|.||||+|+..|+.+++++|+++|++..... ..+.+++.++
T Consensus 166 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~-~~g~t~l~~A 212 (231)
T 3aji_A 166 NIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIEN-KEEKTPLQVA 212 (231)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCC-TTSCCHHHHS
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHH
Confidence 9999999999999999999999999999999865443 3334444443
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=5.4e-38 Score=277.16 Aligned_cols=196 Identities=23% Similarity=0.231 Sum_probs=180.6
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCC----CccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHH
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGA----DLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLL 261 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 261 (403)
.+.+|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH 83 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 46678899999999999999999998764 68999999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHHHHcCCCc------cc--cCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCChHHHHHHHcCc
Q 015680 262 EAIKCGHDGVTSLLVKEGASL------NV--DDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDY-DHRTPLHVAASEGL 332 (403)
Q Consensus 262 ~A~~~~~~~~v~~L~~~~~~~------~~--~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~-~g~t~Lh~A~~~~~ 332 (403)
+|+..|+.+++++|++++.+. +. ..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~ 163 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN 163 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 999999999999999998753 22 3478999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccc
Q 015680 333 YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLS 381 (403)
Q Consensus 333 ~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~ 381 (403)
.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|+++..
T Consensus 164 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 212 (236)
T 1ikn_D 164 PDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQ 212 (236)
T ss_dssp HHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGS
T ss_pred HHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhh
Confidence 9999999999999999999999999999999999999999999998763
No 22
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.7e-37 Score=276.08 Aligned_cols=193 Identities=21% Similarity=0.153 Sum_probs=179.4
Q ss_pred HhhhHHHhhccCCHH----HHHHHHHcCCCccc----cCCCCCcHHHHHHHc---CcHHHHHHHHhcCCCCCcC------
Q 015680 190 LALRFNSAAYHGDLY----QLKGLIRAGADLNK----TDYDGRSPLHLATSR---GYEDITLFLIQKGVDINIK------ 252 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~----~~~~ll~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~~------ 252 (403)
|.||||.|+..|+.+ +++++++.|++++. .+..|+||||+|+.. |+.+++++|++.|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 578999999999997 66777789999998 899999999999999 9999999999998876633
Q ss_pred -----CCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC---------------CCchHHHHHHcCCHHHHHHHHH---C
Q 015680 253 -----DKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---------------AGSFLCIAVARGDSDLLKRVLS---N 309 (403)
Q Consensus 253 -----~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~---------------~~~~l~~a~~~~~~~~v~~Ll~---~ 309 (403)
|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++ .
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 3679999999999999999999999999998876 7799999999999999999999 9
Q ss_pred CCCCCCCCCCCChHHHHHHH--cCcHH-------HHHHHHHcCCCc-------ccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 015680 310 GVDPNSRDYDHRTPLHVAAS--EGLYL-------MAKLLLEAGASV-------FTKDRWGNTPLDEGRMCGNKNLIKLLE 373 (403)
Q Consensus 310 ~~~~~~~~~~g~t~Lh~A~~--~~~~~-------~~~~Ll~~g~d~-------~~~~~~g~t~l~~A~~~~~~~~v~~Ll 373 (403)
|++++.+|..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||+|+.+|+.+++++|+
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll 241 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL 241 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 99999999999999999999 78888 999999999999 899999999999999999999999999
Q ss_pred Hcccccccc
Q 015680 374 DAKCTQLSE 382 (403)
Q Consensus 374 ~~~~~~~~~ 382 (403)
++|++...+
T Consensus 242 ~~g~~~~~~ 250 (256)
T 2etb_A 242 QREFSGAAA 250 (256)
T ss_dssp HHHHHHHHH
T ss_pred hCCCCCCCc
Confidence 999976543
No 23
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.7e-36 Score=269.57 Aligned_cols=223 Identities=26% Similarity=0.285 Sum_probs=197.4
Q ss_pred HHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHH
Q 015680 158 VLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYED 237 (403)
Q Consensus 158 ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~ 237 (403)
.++.+...+..++...+++...+ ....+..+.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus 42 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 119 (285)
T 1wdy_A 42 PLHNAVQMSREDIVELLLRHGAD--PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 119 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHH
Confidence 33444444444444444433322 2334567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcC----------CCCCCcHHHHHHHcCChHHHHHHHHc-CCCccccC--CCchHHHHHHcCC----H
Q 015680 238 ITLFLIQKGVDINIK----------DKFGNTPLLEAIKCGHDGVTSLLVKE-GASLNVDD--AGSFLCIAVARGD----S 300 (403)
Q Consensus 238 ~~~~Ll~~~~~~~~~----------~~~g~t~l~~A~~~~~~~~v~~L~~~-~~~~~~~~--~~~~l~~a~~~~~----~ 300 (403)
++++|++.|++++.. +..|.||||+|+..|+.+++++|+++ |.+++..+ |.||+|+|+..++ .
T Consensus 120 ~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 199 (285)
T 1wdy_A 120 ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVE 199 (285)
T ss_dssp HHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHH
T ss_pred HHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHH
Confidence 999999999999887 77899999999999999999999998 99888765 7799999999999 9
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHH-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 301 DLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLE-AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 301 ~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~-~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
+++++|++.|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.+|+.+++++|+++|++.
T Consensus 200 ~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999999999 89999999999999999999999999999999999986
Q ss_pred ccc
Q 015680 380 LSE 382 (403)
Q Consensus 380 ~~~ 382 (403)
-..
T Consensus 280 ~~~ 282 (285)
T 1wdy_A 280 DCG 282 (285)
T ss_dssp CCS
T ss_pred Ccc
Confidence 544
No 24
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-36 Score=286.33 Aligned_cols=226 Identities=19% Similarity=0.245 Sum_probs=195.3
Q ss_pred cchHHHHHhhhccccchhhhhccc------ceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHH
Q 015680 154 DGRKVLTNLLEGKESNLRLKQVES------DITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPL 227 (403)
Q Consensus 154 ~~~~ll~~ll~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L 227 (403)
.+...++.+...+..++...++.. +.....+..+..+.||||+|+..|+.+++++|++.|++++..+..|.|||
T Consensus 124 ~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L 203 (373)
T 2fo1_E 124 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 203 (373)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHH
Confidence 345555555555554443333210 12233455677889999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhcC---CCCCcCCCCCCcHHHHHHHcC---ChHHHHHHHHcCCCccc----------cCCCchH
Q 015680 228 HLATSRGYEDITLFLIQKG---VDINIKDKFGNTPLLEAIKCG---HDGVTSLLVKEGASLNV----------DDAGSFL 291 (403)
Q Consensus 228 ~~A~~~~~~~~~~~Ll~~~---~~~~~~~~~g~t~l~~A~~~~---~~~~v~~L~~~~~~~~~----------~~~~~~l 291 (403)
|+|+..|+.+++++|++.+ ++++..|..|.||||+|+..+ +.+++++|+++|++++. ..|.|||
T Consensus 204 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~L 283 (373)
T 2fo1_E 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTAL 283 (373)
T ss_dssp HHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTH
T ss_pred HHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHH
Confidence 9999999999999999987 799999999999999999998 79999999999999875 2478999
Q ss_pred HHHHHcCCHHHHHHHHHCC-CCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHH
Q 015680 292 CIAVARGDSDLLKRVLSNG-VDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIK 370 (403)
Q Consensus 292 ~~a~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~ 370 (403)
|+|+..|+.+++++|++.+ ++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.++++
T Consensus 284 h~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 284 HYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVD 363 (373)
T ss_dssp HHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999876 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHccccc
Q 015680 371 LLEDAKCTQ 379 (403)
Q Consensus 371 ~Ll~~~~~~ 379 (403)
+|++++++.
T Consensus 364 ~Ll~~~a~~ 372 (373)
T 2fo1_E 364 IFDRCRPER 372 (373)
T ss_dssp HHHTTC---
T ss_pred HHHhcCccc
Confidence 999999864
No 25
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1e-35 Score=247.87 Aligned_cols=156 Identities=46% Similarity=0.651 Sum_probs=103.8
Q ss_pred hHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHH
Q 015680 193 RFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVT 272 (403)
Q Consensus 193 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v 272 (403)
+|+.||..|+.++|++|++.|+++|.+|..|+||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~- 85 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV- 85 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH-
Confidence 4666666666666666666666666666666666666666666666666666666666666666666666665555554
Q ss_pred HHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCC
Q 015680 273 SLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRW 352 (403)
Q Consensus 273 ~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~ 352 (403)
+++|++.|++++.+|.+|+||||+|+..|+.+++++|+++|+|++.+|.+
T Consensus 86 ------------------------------v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~ 135 (169)
T 4gpm_A 86 ------------------------------VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSD 135 (169)
T ss_dssp ------------------------------HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ------------------------------HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCC
Confidence 45555555666666777777777777777777777777777777777777
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 353 GNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 353 g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
|.||||+|+.+|+.+++++|+++|++.
T Consensus 136 G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 136 GRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 777777777777777777777777753
No 26
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-35 Score=286.35 Aligned_cols=246 Identities=22% Similarity=0.215 Sum_probs=191.5
Q ss_pred hcchHHHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHH
Q 015680 153 CDGRKVLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATS 232 (403)
Q Consensus 153 ~~~~~ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~ 232 (403)
..+...++.+...+..++...+++...+.+ ..+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 12 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~--~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 12 ESGLTPLHVASFMGHLPIVKNLLQRGASPN--VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAAR 89 (437)
T ss_dssp ---CCHHHHHHHHTCHHHHHHHHHTTCCSC--CSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCC--CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 345666777777777777766666544433 344556788888888888888888888888888888888888888888
Q ss_pred cCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCC
Q 015680 233 RGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNG 310 (403)
Q Consensus 233 ~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~ 310 (403)
.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++++.+..+ +.||||+|+..|+.+++++|++.|
T Consensus 90 ~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 169 (437)
T 1n11_A 90 IGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 169 (437)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 888888888888888888888888888888888888888888888887766543 668888888888888888888888
Q ss_pred CCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc-----
Q 015680 311 VDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHY----- 385 (403)
Q Consensus 311 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~----- 385 (403)
++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.+|+.+++++|+++|++.-.....
T Consensus 170 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 249 (437)
T 1n11_A 170 AHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPL 249 (437)
T ss_dssp CCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 888888888888888888888888888888888888888888888888888888888888888888764433222
Q ss_pred ---cccchhhhhhhhccc
Q 015680 386 ---CSQGMIGIAENLLLL 400 (403)
Q Consensus 386 ---~~~~~~~~~~~l~~~ 400 (403)
+..+..++++.|+..
T Consensus 250 ~~A~~~g~~~~v~~Ll~~ 267 (437)
T 1n11_A 250 HLAAQEGHAEMVALLLSK 267 (437)
T ss_dssp HHHHHTTCHHHHHHHHTT
T ss_pred HHHHHCCCHHHHHHHHhc
Confidence 334567777777653
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5e-36 Score=268.73 Aligned_cols=193 Identities=24% Similarity=0.318 Sum_probs=178.8
Q ss_pred cCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHH
Q 015680 183 IGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE 262 (403)
Q Consensus 183 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 262 (403)
.+..+..+.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++.|++++. +..|.||||+
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~ 107 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHE 107 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHH
Confidence 344566789999999999999999999999999999999999999999999999999999999999985 4569999999
Q ss_pred HHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHH
Q 015680 263 AIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLL 340 (403)
Q Consensus 263 A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll 340 (403)
|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|+
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll 186 (261)
T 2xai_A 108 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLM 186 (261)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHH
Confidence 999999999999999999998765 67999999999999999999999999995 889999999999999999999999
Q ss_pred HcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 341 EAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 341 ~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
++|+|++.+|..|.||+|+|+.++ +++++|++++..+
T Consensus 187 ~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~ 223 (261)
T 2xai_A 187 DFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPP 223 (261)
T ss_dssp HTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCC
T ss_pred HcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCc
Confidence 999999999999999999999665 5899999987754
No 28
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.6e-36 Score=263.05 Aligned_cols=190 Identities=27% Similarity=0.389 Sum_probs=180.4
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcC-CCCCcCCCCCCcHHHHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKG-VDINIKDKFGNTPLLEA 263 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~A 263 (403)
..+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.| .+++..+..|.||||+|
T Consensus 39 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A 118 (237)
T 3b7b_A 39 TCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWA 118 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHH
T ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Confidence 44566889999999999999999999999999999999999999999999999999999998 89999999999999999
Q ss_pred HHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHH
Q 015680 264 IKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLE 341 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 341 (403)
+..|+.+++++|+++|++++..+ +.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++
T Consensus 119 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (237)
T 3b7b_A 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLS 198 (237)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHH
Confidence 99999999999999999988765 7799999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 015680 342 AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED 374 (403)
Q Consensus 342 ~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 374 (403)
+|+|++.+|..|.||||+|+.+++.+.+..|++
T Consensus 199 ~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 199 RDSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred cCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999977766654
No 29
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-36 Score=271.59 Aligned_cols=193 Identities=24% Similarity=0.311 Sum_probs=177.1
Q ss_pred CcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q 015680 184 GKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 263 (403)
Q Consensus 184 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A 263 (403)
+..+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+ .|.||||+|
T Consensus 86 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A 164 (285)
T 3d9h_A 86 NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEA 164 (285)
T ss_dssp CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHH
T ss_pred CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHH
Confidence 3456678999999999999999999999999999999999999999999999999999999999998654 599999999
Q ss_pred HHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHH
Q 015680 264 IKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLE 341 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 341 (403)
+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++.|++++. +..|+||||+|+..|+.+++++|++
T Consensus 165 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 165 ARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999988765 77999999999999999999999999995 8899999999999999999999999
Q ss_pred cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-ccccc
Q 015680 342 AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA-KCTQL 380 (403)
Q Consensus 342 ~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~-~~~~~ 380 (403)
+|+|++.+|..|.||||+|+ ++.+++++|+++ |++..
T Consensus 244 ~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 244 FGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLP 281 (285)
T ss_dssp TTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred CCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence 99999999999999999999 567999999999 66543
No 30
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-35 Score=284.13 Aligned_cols=223 Identities=23% Similarity=0.293 Sum_probs=188.1
Q ss_pred HHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHH
Q 015680 158 VLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYED 237 (403)
Q Consensus 158 ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~ 237 (403)
.++.+...+..++...+++.... .+..+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+
T Consensus 149 ~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 226 (437)
T 1n11_A 149 PLHVAAKYGKVRVAELLLERDAH--PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVE 226 (437)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC--TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 33344444444444444433322 2334556788999999999999999999999988888888999999999999999
Q ss_pred HHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCC
Q 015680 238 ITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNS 315 (403)
Q Consensus 238 ~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~ 315 (403)
++++|++.|++++..+..|.||||+|+..|+.+++++|++++++++..+ |.||||+|+..|+.+++++|+++|++++.
T Consensus 227 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 306 (437)
T 1n11_A 227 VARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA 306 (437)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC
Confidence 9999999999999999999999999999999999999999988887655 67899999999999999999999999999
Q ss_pred CCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 316 RDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 316 ~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
.|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.++|++|+++|+++-..
T Consensus 307 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~ 373 (437)
T 1n11_A 307 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEV 373 (437)
T ss_dssp CCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCC
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986554
No 31
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.1e-35 Score=244.24 Aligned_cols=160 Identities=34% Similarity=0.501 Sum_probs=127.1
Q ss_pred cchHHHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHc
Q 015680 154 DGRKVLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSR 233 (403)
Q Consensus 154 ~~~~ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~ 233 (403)
.+..++ .+.+.+..++...+++...+ .+..+.+|.||||+|+..++.+++++|++.|++++.++..|+||||+|+..
T Consensus 4 lg~~L~-~Aa~~G~~~~v~~Ll~~Gad--vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 4 LGKRLI-EAAENGNKDRVKDLIENGAD--VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHH-HHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHH-HHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHc
Confidence 344544 45556666666667766544 455677899999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCC
Q 015680 234 GYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDP 313 (403)
Q Consensus 234 ~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~ 313 (403)
|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++ |+++
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-------------------------------gad~ 129 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-------------------------------GADV 129 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------------------------------TCCT
T ss_pred CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------------------------------CCCc
Confidence 999999999999999999999999999999988877666666555 4556
Q ss_pred CCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcc
Q 015680 314 NSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF 347 (403)
Q Consensus 314 ~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~ 347 (403)
+.+|.+|+||||+|+..|+.+++++|+++|+++.
T Consensus 130 ~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 130 NTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 6666777777777777777777777777777764
No 32
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4e-35 Score=267.95 Aligned_cols=197 Identities=30% Similarity=0.403 Sum_probs=181.0
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHH
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 265 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~ 265 (403)
.+..+.++|+.||..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHC-CCC--------------------------CCCC
Q 015680 266 CGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSN-GVD--------------------------PNSR 316 (403)
Q Consensus 266 ~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~-~~~--------------------------~~~~ 316 (403)
.|+.+++++|+++|++++..+ |.||+|+|+..++.++++.++.. +.+ ....
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 999999999999999988765 77999999999999999887742 332 2345
Q ss_pred CCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 317 DYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 317 ~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|++.-..
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~ 261 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV 261 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCc
Confidence 678999999999999999999999999999999999999999999999999999999999986543
No 33
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.3e-36 Score=269.93 Aligned_cols=183 Identities=25% Similarity=0.282 Sum_probs=159.0
Q ss_pred CcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCC---------------
Q 015680 184 GKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVD--------------- 248 (403)
Q Consensus 184 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~--------------- 248 (403)
+..+..+.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|++.|++
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 118 (282)
T 1oy3_D 39 DLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQD 118 (282)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccc
Confidence 34567789999999999999999999999999999999999999999999999999999998755
Q ss_pred --------------------------------CCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC---CCchHHH
Q 015680 249 --------------------------------INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---AGSFLCI 293 (403)
Q Consensus 249 --------------------------------~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~---~~~~l~~ 293 (403)
++.++..|.||||+|+..|+.+++++|+++|++++..+ |.||||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 198 (282)
T 1oy3_D 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHL 198 (282)
T ss_dssp -------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred cCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHH
Confidence 67788899999999999999999999999999999865 7899999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCH
Q 015680 294 AVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 366 (403)
Q Consensus 294 a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~ 366 (403)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|....+.
T Consensus 199 A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 199 AVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC----------------
T ss_pred HHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999887644
No 34
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.6e-35 Score=271.30 Aligned_cols=241 Identities=23% Similarity=0.246 Sum_probs=193.2
Q ss_pred HHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCc----------------------
Q 015680 159 LTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADL---------------------- 216 (403)
Q Consensus 159 l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~---------------------- 216 (403)
+..+.+.+..++...+++.+.+.+. ..+..|.||||+|+..|+.+++++|+++|+++
T Consensus 29 L~~Av~~g~~~~V~~LL~~Gadvn~-~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~ 107 (337)
T 4g8k_A 29 LIKAVQNEDVDLVQQLLEGGANVNF-QEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKL 107 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchh
Confidence 3334444444444444433332222 11234789999999999999999999988764
Q ss_pred -----------cccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcC----------CCCCCcHHHHHHHcCChHHHHHH
Q 015680 217 -----------NKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIK----------DKFGNTPLLEAIKCGHDGVTSLL 275 (403)
Q Consensus 217 -----------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~----------~~~g~t~l~~A~~~~~~~~v~~L 275 (403)
+..+..|.||||+|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.++|++|
T Consensus 108 ~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~L 187 (337)
T 4g8k_A 108 LKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 187 (337)
T ss_dssp HHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHH
T ss_pred hHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHH
Confidence 445677889999999999999999999999887654 34688999999999999999999
Q ss_pred HH-cCCCccccC--CCchHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHc-CCCcc
Q 015680 276 VK-EGASLNVDD--AGSFLCIAVARGD----SDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEA-GASVF 347 (403)
Q Consensus 276 ~~-~~~~~~~~~--~~~~l~~a~~~~~----~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~-g~d~~ 347 (403)
++ .|++++..+ +.+++++++..++ ..++++|+++|++++.+|..|+||||+|+..|+.+++++|+.. |++++
T Consensus 188 L~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn 267 (337)
T 4g8k_A 188 LDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 267 (337)
T ss_dssp HHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT
T ss_pred HhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCccc
Confidence 96 588888765 6688888776654 3588999999999999999999999999999999999999985 89999
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccccc---ccccchhhhhhhhccc
Q 015680 348 TKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFH---YCSQGMIGIAENLLLL 400 (403)
Q Consensus 348 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~---~~~~~~~~~~~~l~~~ 400 (403)
.+|.+|.||||+|+.+|+.++|++|+++|++.-.... .+..+..++++.||.-
T Consensus 268 ~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv~~Ll~~ 323 (337)
T 4g8k_A 268 DTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLLSH 323 (337)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 9999999999999999999999999999998654332 2567788999999864
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=256.60 Aligned_cols=219 Identities=25% Similarity=0.262 Sum_probs=133.6
Q ss_pred HHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccC-CCCCcHHHHHHHcCcH
Q 015680 158 VLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTD-YDGRSPLHLATSRGYE 236 (403)
Q Consensus 158 ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~ 236 (403)
.+..++..+..++...+++...+ ....+..+.+|||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.
T Consensus 12 ~l~~A~~~g~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~ 89 (240)
T 3eu9_A 12 DIVKATQYGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHL 89 (240)
T ss_dssp CHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCH
T ss_pred HHHHHHHcCChHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCH
Confidence 34444455544444444444333 23334455666666666666666666666666655333 3366666666666666
Q ss_pred HHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCC-HHHHHHHHHCCCCC
Q 015680 237 DITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGD-SDLLKRVLSNGVDP 313 (403)
Q Consensus 237 ~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~-~~~v~~Ll~~~~~~ 313 (403)
+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+ |.||+|+|+..++ .+++++|++.|+++
T Consensus 90 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 90 SMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCc
Confidence 66666666666666666666666666666666666666666666665543 4466666665554 56666666666666
Q ss_pred CCCCC-CCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 015680 314 NSRDY-DHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCT 378 (403)
Q Consensus 314 ~~~~~-~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 378 (403)
+..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 170 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 170 NLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp TCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 66664 566666666666666666666666666666666666666666666666666666666654
No 36
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3.5e-36 Score=271.54 Aligned_cols=197 Identities=21% Similarity=0.196 Sum_probs=173.9
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHH----cCCCcc----ccCCCCCcHHHHHHHc---CcHHHHHHHHhcCCCC----
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIR----AGADLN----KTDYDGRSPLHLATSR---GYEDITLFLIQKGVDI---- 249 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~----~~~~~~----~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~~~~---- 249 (403)
..+..+.++||.|+..|+.++++.|++ .+++++ ..+..|+||||+|+.. |+.+++++|++.|+++
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~ 87 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK 87 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh
Confidence 456678999999999999999998887 456655 3578999999999987 9999999999987652
Q ss_pred ---C----cCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC----------------CCchHHHHHHcCCHHHHHHH
Q 015680 250 ---N----IKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD----------------AGSFLCIAVARGDSDLLKRV 306 (403)
Q Consensus 250 ---~----~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~----------------~~~~l~~a~~~~~~~~v~~L 306 (403)
+ ..|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|
T Consensus 88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 2 256789999999999999999999999999998764 77999999999999999999
Q ss_pred HH---CCCCCCCCCCCCChHHHHHHHcCc---------HHHHHHHHHcCCCcc-------cCCCCCCCHHHHHHHcCCHH
Q 015680 307 LS---NGVDPNSRDYDHRTPLHVAASEGL---------YLMAKLLLEAGASVF-------TKDRWGNTPLDEGRMCGNKN 367 (403)
Q Consensus 307 l~---~~~~~~~~~~~g~t~Lh~A~~~~~---------~~~~~~Ll~~g~d~~-------~~~~~g~t~l~~A~~~~~~~ 367 (403)
++ .|++++.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|.||||+|+.+|+.+
T Consensus 168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 99 999999999999999999999988 899999999999996 48999999999999999999
Q ss_pred HHHHHHHccc-cccc
Q 015680 368 LIKLLEDAKC-TQLS 381 (403)
Q Consensus 368 ~v~~Ll~~~~-~~~~ 381 (403)
++++|+++|+ |+..
T Consensus 248 iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 248 VLAYILQREIHEPEC 262 (273)
T ss_dssp HHHHHHHHHTC----
T ss_pred HHHHHHHCCCCCchh
Confidence 9999999999 4443
No 37
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=257.76 Aligned_cols=215 Identities=24% Similarity=0.257 Sum_probs=194.4
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCC-CCCCcHHHHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKD-KFGNTPLLEA 263 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~A 263 (403)
..+..+.++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 446678899999999999999999999999999999999999999999999999999999999987555 4599999999
Q ss_pred HHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCc-HHHHHHHH
Q 015680 264 IKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGL-YLMAKLLL 340 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~-~~~~~~Ll 340 (403)
+..|+.+++++|+++|++++..+ +.||+|+|+..|+.+++++|++.|++++..+..|.||||+|+..++ .+++++|+
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~ 163 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHH
Confidence 99999999999999999998765 6799999999999999999999999999999999999999997765 89999999
Q ss_pred HcCCCcccCCC-CCCCHHHHHHHcCCHHHHHHHHHccccccccccc--------cccchhhhhhhhcc
Q 015680 341 EAGASVFTKDR-WGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHY--------CSQGMIGIAENLLL 399 (403)
Q Consensus 341 ~~g~d~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~~~~l~~ 399 (403)
+.|++++..+. .|.||||+|+.+|+.+++++|+++|++....... ...+..+++++|+.
T Consensus 164 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~ 231 (240)
T 3eu9_A 164 TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQE 231 (240)
T ss_dssp HTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred hcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999987 8999999999999999999999999986543322 44556777777764
No 38
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.3e-36 Score=281.99 Aligned_cols=213 Identities=20% Similarity=0.197 Sum_probs=192.6
Q ss_pred hhHhhhHHHhhccCCHHHHHHHH--------HcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcH
Q 015680 188 AELALRFNSAAYHGDLYQLKGLI--------RAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTP 259 (403)
Q Consensus 188 ~~~~~~l~~a~~~~~~~~~~~ll--------~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 259 (403)
..|.||||+|+..|+.+++++|+ +.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 57899999999999998888876 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCChHHHHHHHHcC---CCcccc--CCCchHHHHHHcC---CHHHHHHHHHCCCCCCC--------CCCCCChH
Q 015680 260 LLEAIKCGHDGVTSLLVKEG---ASLNVD--DAGSFLCIAVARG---DSDLLKRVLSNGVDPNS--------RDYDHRTP 323 (403)
Q Consensus 260 l~~A~~~~~~~~v~~L~~~~---~~~~~~--~~~~~l~~a~~~~---~~~~v~~Ll~~~~~~~~--------~~~~g~t~ 323 (403)
||+|+..|+.+++++|++++ .+++.. +|.||||+|+..+ +.+++++|++.|++++. .|..|.||
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~ 282 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCH
Confidence 99999999999999999987 667664 4789999999998 89999999999999876 57789999
Q ss_pred HHHHHHcCcHHHHHHHHHcC-CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc--------cccchhhhh
Q 015680 324 LHVAASEGLYLMAKLLLEAG-ASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHY--------CSQGMIGIA 394 (403)
Q Consensus 324 Lh~A~~~~~~~~~~~Ll~~g-~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~~ 394 (403)
||+|+..|+.+++++|+++| ++++.+|..|.||||+|+.+|+.++|++|+++|++.-..... ...+..+++
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999875 999999999999999999999999999999999986543322 455677788
Q ss_pred hhhccc
Q 015680 395 ENLLLL 400 (403)
Q Consensus 395 ~~l~~~ 400 (403)
++|+..
T Consensus 363 ~~Ll~~ 368 (373)
T 2fo1_E 363 DIFDRC 368 (373)
T ss_dssp HHHHTT
T ss_pred HHHHhc
Confidence 877653
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.4e-35 Score=257.66 Aligned_cols=201 Identities=26% Similarity=0.284 Sum_probs=181.4
Q ss_pred CCHHHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcC
Q 015680 201 GDLYQLKGLIRAGADLNKT-DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEG 279 (403)
Q Consensus 201 ~~~~~~~~ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 279 (403)
|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 6788899999999998765 789999999999999999999999999999999999999999999999999999999998
Q ss_pred C-Ccccc--CCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCH
Q 015680 280 A-SLNVD--DAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTP 356 (403)
Q Consensus 280 ~-~~~~~--~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~ 356 (403)
. +++.. ++.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 161 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 161 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCH
Confidence 6 66654 47799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHccccccccccc--------cccchhhhhhhhcccc
Q 015680 357 LDEGRMCGNKNLIKLLEDAKCTQLSEFHY--------CSQGMIGIAENLLLLP 401 (403)
Q Consensus 357 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~ 401 (403)
||+|+.+|+.+++++|+++|++....... ...+..+++++|+..+
T Consensus 162 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 162 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 99999999999999999999976543222 4566778888887654
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.4e-35 Score=258.51 Aligned_cols=187 Identities=24% Similarity=0.213 Sum_probs=174.4
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcC--CCccc-cCCCCCcHHHHHHHcCcHHHHHHHHhcC--CCCCcCCCCCCcHH
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAG--ADLNK-TDYDGRSPLHLATSRGYEDITLFLIQKG--VDINIKDKFGNTPL 260 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~--~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~~--~~~~~~~~~g~t~l 260 (403)
.+..+.||||+|+..|+.+++++|++.| ++++. .+..|.||||+|+..|+.+++++|++.| ++++.++..|.|||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L 111 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCL 111 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHH
Confidence 4667899999999999999999999999 66666 7889999999999999999999999998 88999999999999
Q ss_pred HHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCChHHHHHHHcCcHHHHH
Q 015680 261 LEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNG-VDPNSRDYDHRTPLHVAASEGLYLMAK 337 (403)
Q Consensus 261 ~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~Lh~A~~~~~~~~~~ 337 (403)
|+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++.| ++++..|..|+||||+|+..|+.++++
T Consensus 112 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~ 191 (228)
T 2dzn_A 112 HLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191 (228)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999999998765 779999999999999999999999 999999999999999999999999999
Q ss_pred HHH-HcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 015680 338 LLL-EAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA 375 (403)
Q Consensus 338 ~Ll-~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 375 (403)
+|+ ++|+|++.+|..|.||+|+|+.. +++++|+++
T Consensus 192 ~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 192 LLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp HHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred HHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 999 89999999999999999999765 566777653
No 41
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.5e-34 Score=268.29 Aligned_cols=217 Identities=28% Similarity=0.320 Sum_probs=195.9
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIRA-GADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 263 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A 263 (403)
..+..+.++|+.|+..|+.+.++.++.. +.+++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus 19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 98 (351)
T 3utm_A 19 LTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNA 98 (351)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred eeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH
Confidence 3456778999999999999999999975 788999999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCC------------------------
Q 015680 264 IKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRD------------------------ 317 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~------------------------ 317 (403)
+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|++++..+
T Consensus 99 ~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 99 CSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 99999999999999999998866 6799999999999999999999999887654
Q ss_pred ------------------------------CCCChHHHHHHHc---CcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcC
Q 015680 318 ------------------------------YDHRTPLHVAASE---GLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG 364 (403)
Q Consensus 318 ------------------------------~~g~t~Lh~A~~~---~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~ 364 (403)
..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+.+|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 258 (351)
T 3utm_A 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA 258 (351)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred ccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcC
Confidence 4567999999999 6689999999999999999999999999999999
Q ss_pred CHHHHHHHHHccccccccccc--------cccchhhhhhhhcccc
Q 015680 365 NKNLIKLLEDAKCTQLSEFHY--------CSQGMIGIAENLLLLP 401 (403)
Q Consensus 365 ~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~ 401 (403)
+.+++++|+++|++.-..... +..+..++++.|+..+
T Consensus 259 ~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 303 (351)
T 3utm_A 259 HNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYG 303 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 999999999999976543322 4566788888887653
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=7.9e-36 Score=267.17 Aligned_cols=194 Identities=20% Similarity=0.170 Sum_probs=174.4
Q ss_pred hHhhhHHHhhccCCHHHHHHHH----HcCCCccccC----CCCCcHHHHHH---HcCcHHHHHHHHhcCCC---------
Q 015680 189 ELALRFNSAAYHGDLYQLKGLI----RAGADLNKTD----YDGRSPLHLAT---SRGYEDITLFLIQKGVD--------- 248 (403)
Q Consensus 189 ~~~~~l~~a~~~~~~~~~~~ll----~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~~~~Ll~~~~~--------- 248 (403)
.+.++||.|+..|+.+.++.|+ +.+++++..+ ..|+||||+|+ ..|+.+++++|++.|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 3578999999999999655544 5899988665 67999999999 67999999999998743
Q ss_pred --CCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC----------------CCchHHHHHHcCCHHHHHHHHH--
Q 015680 249 --INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD----------------AGSFLCIAVARGDSDLLKRVLS-- 308 (403)
Q Consensus 249 --~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~----------------~~~~l~~a~~~~~~~~v~~Ll~-- 308 (403)
++..|..|+||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 45556689999999999999999999999999999876 7899999999999999999999
Q ss_pred -CCCCCCCCCCCCChHHHHHHHcCc---------HHHHHHHHHcCCCc-------ccCCCCCCCHHHHHHHcCCHHHHHH
Q 015680 309 -NGVDPNSRDYDHRTPLHVAASEGL---------YLMAKLLLEAGASV-------FTKDRWGNTPLDEGRMCGNKNLIKL 371 (403)
Q Consensus 309 -~~~~~~~~~~~g~t~Lh~A~~~~~---------~~~~~~Ll~~g~d~-------~~~~~~g~t~l~~A~~~~~~~~v~~ 371 (403)
.|++++.+|..|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+.+|+.+++++
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~ 243 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQH 243 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999999998887 79999999999999 6799999999999999999999999
Q ss_pred HHHcccccccc
Q 015680 372 LEDAKCTQLSE 382 (403)
Q Consensus 372 Ll~~~~~~~~~ 382 (403)
|+++|+++...
T Consensus 244 Ll~~g~~~~~~ 254 (260)
T 3jxi_A 244 IIRREIADAAA 254 (260)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHhCCCcccc
Confidence 99999976543
No 43
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=3e-35 Score=267.04 Aligned_cols=215 Identities=16% Similarity=0.162 Sum_probs=189.4
Q ss_pred hHHHHHhhhccccchhhhhcccceeeecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCc
Q 015680 156 RKVLTNLLEGKESNLRLKQVESDITFHIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGY 235 (403)
Q Consensus 156 ~~ll~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~ 235 (403)
...++.+...+..++...++....+.+.. +|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGN 107 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCC
Confidence 34455555555555555555444333332 37899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcCCCCC-CcHHHHHHHcCChHHHHHHHHcCCCcccc-CCCchHHHHHHcCCHHHHHHHHHCCCCC
Q 015680 236 EDITLFLIQKGVDINIKDKFG-NTPLLEAIKCGHDGVTSLLVKEGASLNVD-DAGSFLCIAVARGDSDLLKRVLSNGVDP 313 (403)
Q Consensus 236 ~~~~~~Ll~~~~~~~~~~~~g-~t~l~~A~~~~~~~~v~~L~~~~~~~~~~-~~~~~l~~a~~~~~~~~v~~Ll~~~~~~ 313 (403)
.+++++|+++|++++.++..| .||||+|+..|+.+++++|+++|++.... +|.||||+|+..|+.+++++|+++|+++
T Consensus 108 ~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 187 (285)
T 3kea_A 108 MQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTST 187 (285)
T ss_dssp HHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCC
Confidence 999999999999999999999 79999999999999999999999888655 6789999999999999999999999999
Q ss_pred CCCCCCCChH-HHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccc
Q 015680 314 NSRDYDHRTP-LHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLS 381 (403)
Q Consensus 314 ~~~~~~g~t~-Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~ 381 (403)
+..|..|+|| ||+|+..|+.+++++|+++|+|++.+|. .|+..|+.+++++|+++|++.-.
T Consensus 188 n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~~~~ 249 (285)
T 3kea_A 188 NTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIEKHVEYKS 249 (285)
T ss_dssp CTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHHcCCCCCC
Confidence 9999999998 9999999999999999999999988873 56889999999999999997443
No 44
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2.4e-33 Score=260.72 Aligned_cols=215 Identities=27% Similarity=0.290 Sum_probs=187.7
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCC-CCCcHHHHHHHcCcHHHHHHHHhcCCCC---------------
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDY-DGRSPLHLATSRGYEDITLFLIQKGVDI--------------- 249 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~-~g~t~L~~A~~~~~~~~~~~Ll~~~~~~--------------- 249 (403)
...++.|+|+.|+..|++++|++||++|+++|.++. .|+||||+|+..|+.++|++|+++|+++
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 456788999999999999999999999999998875 5999999999999999999999988765
Q ss_pred ------------------CcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCcccc------------CCCchHHHHHHcCC
Q 015680 250 ------------------NIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD------------DAGSFLCIAVARGD 299 (403)
Q Consensus 250 ------------------~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~------------~~~~~l~~a~~~~~ 299 (403)
+..|..|.||+|+|+..|+.+++++|+++|++++.. .|.||||+|+..|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 445678999999999999999999999999988753 35799999999999
Q ss_pred HHHHHHHHH-CCCCCCCCCCCCChHHHHHHHcCc----HHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 015680 300 SDLLKRVLS-NGVDPNSRDYDHRTPLHVAASEGL----YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLED 374 (403)
Q Consensus 300 ~~~v~~Ll~-~~~~~~~~~~~g~t~Lh~A~~~~~----~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 374 (403)
.+++++|++ .|++++..|..|.||+|.++..+. ..++++|+++|+|++.+|..|.||||+|+..|+.+++++|++
T Consensus 181 ~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 181 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 999999995 699999999999999998887653 468999999999999999999999999999999999999998
Q ss_pred c-ccccccccc--------ccccchhhhhhhhccc
Q 015680 375 A-KCTQLSEFH--------YCSQGMIGIAENLLLL 400 (403)
Q Consensus 375 ~-~~~~~~~~~--------~~~~~~~~~~~~l~~~ 400 (403)
. |++.-.... .+..+..++++.||.-
T Consensus 261 ~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 261 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp STTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred hcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 6 554322221 2566788999998864
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-34 Score=262.03 Aligned_cols=193 Identities=27% Similarity=0.383 Sum_probs=173.7
Q ss_pred CcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q 015680 184 GKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEA 263 (403)
Q Consensus 184 ~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A 263 (403)
+..+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 146 (299)
T 1s70_B 67 NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIA 146 (299)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 34556788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHc-CCCccc----------------------------cCCCchHHHHHHcCCHHHHHHHHHCCCCCC
Q 015680 264 IKCGHDGVTSLLVKE-GASLNV----------------------------DDAGSFLCIAVARGDSDLLKRVLSNGVDPN 314 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~-~~~~~~----------------------------~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~ 314 (403)
+..++.+++++++.. +.+++. ..|.||||+|+..|+.+++++|++.|++++
T Consensus 147 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226 (299)
T ss_dssp CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 999999999877753 444432 357899999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 015680 315 SRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKC 377 (403)
Q Consensus 315 ~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 377 (403)
..|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+.. ..++++.+++...
T Consensus 227 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~~~ 288 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED-ILGYLEELQKKQN 288 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHHTT
T ss_pred CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999764 4555555555443
No 46
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=8.7e-34 Score=256.11 Aligned_cols=190 Identities=22% Similarity=0.266 Sum_probs=178.1
Q ss_pred hhHhhhHHHhhccCCHHHHHHHHHcCCC--ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCC-CCCcCCCCCCcHHHHHH
Q 015680 188 AELALRFNSAAYHGDLYQLKGLIRAGAD--LNKTDYDGRSPLHLATSRGYEDITLFLIQKGV-DINIKDKFGNTPLLEAI 264 (403)
Q Consensus 188 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~A~ 264 (403)
....+++|.|+..|+.+.++.+++.+.+ +|..|..|+||||+|+..|+.+++++|++.|+ +++..|..|.||||+|+
T Consensus 74 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 74 LACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 3455678999999999999999988766 88899999999999999999999999999998 99999999999999999
Q ss_pred -----HcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHH
Q 015680 265 -----KCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAK 337 (403)
Q Consensus 265 -----~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~ 337 (403)
..++.+++++|++.|...+..+ |.||||+|+..|+.+++++|++.|++++.+|.+|+||||+|+..|+.++++
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 5678999999999998777654 789999999999999999999999999999999999999999999999999
Q ss_pred HHHH-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 015680 338 LLLE-AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKC 377 (403)
Q Consensus 338 ~Ll~-~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 377 (403)
+|++ .|+|++.+|..|.||||+|+.+|+.+++++|++++.
T Consensus 234 ~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 234 LLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9999 899999999999999999999999999999998864
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=4.9e-33 Score=237.37 Aligned_cols=161 Identities=29% Similarity=0.387 Sum_probs=154.5
Q ss_pred ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHH
Q 015680 216 LNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCI 293 (403)
Q Consensus 216 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~ 293 (403)
++.+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..+ |.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999988766 7799999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 015680 294 AVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLE 373 (403)
Q Consensus 294 a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 373 (403)
|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hcc
Q 015680 374 DAK 376 (403)
Q Consensus 374 ~~~ 376 (403)
++|
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 876
No 48
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.2e-32 Score=227.94 Aligned_cols=161 Identities=27% Similarity=0.323 Sum_probs=139.1
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCC
Q 015680 222 DGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGD 299 (403)
Q Consensus 222 ~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~ 299 (403)
.|.||||.|+..|+.+++++|++.+.+++.+|..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46788888888888888888888888888888888888888888888888888888877777654 5678888888888
Q ss_pred HHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 300 SDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 300 ~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred ccc
Q 015680 380 LSE 382 (403)
Q Consensus 380 ~~~ 382 (403)
...
T Consensus 162 ~~~ 164 (167)
T 3v31_A 162 LQN 164 (167)
T ss_dssp CSS
T ss_pred HHH
Confidence 543
No 49
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=2.6e-32 Score=226.16 Aligned_cols=155 Identities=27% Similarity=0.360 Sum_probs=126.2
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCH
Q 015680 223 GRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDS 300 (403)
Q Consensus 223 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~ 300 (403)
..||||.|+..|+.+++++|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++..+ |.||||+|+..|+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4567777777777777777777777777777777777777777 77777777777777766544 56777777777788
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCC-cccCCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 015680 301 DLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS-VFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCT 378 (403)
Q Consensus 301 ~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 378 (403)
+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+.+|+.+++++|+++|+|
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 888888888888888999999999999999999999999999998 588999999999999999999999999999985
No 50
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=6.1e-32 Score=225.71 Aligned_cols=154 Identities=33% Similarity=0.465 Sum_probs=109.1
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCH
Q 015680 223 GRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDS 300 (403)
Q Consensus 223 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~ 300 (403)
+.|+||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 93 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHL 93 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 3445555555555555555555555555555555555555555555555555555555554433 44556666666666
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 015680 301 DLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAK 376 (403)
Q Consensus 301 ~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 376 (403)
+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|
T Consensus 94 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 94 EIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 6667777777788888888999999999999999999999999999999999999999999999999999998875
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=3.4e-32 Score=227.89 Aligned_cols=158 Identities=30% Similarity=0.377 Sum_probs=92.0
Q ss_pred hhHHHhhccCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChH
Q 015680 192 LRFNSAAYHGDLYQLKGLIRAGAD-LNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDG 270 (403)
Q Consensus 192 ~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~ 270 (403)
+|||.|+..|+.+++++|++.+.+ ++..+..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-- 81 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY-- 81 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC--
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC--
Confidence 455555555555555555555544 44455555555555555555555555555555555555555555555555554
Q ss_pred HHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCC
Q 015680 271 VTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKD 350 (403)
Q Consensus 271 ~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~ 350 (403)
.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 82 -----------------------------~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 132 (172)
T 3v30_A 82 -----------------------------TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEA 132 (172)
T ss_dssp -----------------------------HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred -----------------------------HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccC
Confidence 455555555555555566666666666666666666666666666666666
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 015680 351 RWGNTPLDEGRMCGNKNLIKLLEDAKCTQL 380 (403)
Q Consensus 351 ~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 380 (403)
..|.||||+|+.+|+.+++++|++++++..
T Consensus 133 ~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 133 DSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 666666666666666666666666666543
No 52
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.9e-33 Score=260.89 Aligned_cols=193 Identities=22% Similarity=0.269 Sum_probs=178.2
Q ss_pred hhHhhhHHHhhccCCHHHHHHHHHc----CCCccc-----------------cCCCCCcHHHHHHHcC--cHHHHHHHHh
Q 015680 188 AELALRFNSAAYHGDLYQLKGLIRA----GADLNK-----------------TDYDGRSPLHLATSRG--YEDITLFLIQ 244 (403)
Q Consensus 188 ~~~~~~l~~a~~~~~~~~~~~ll~~----~~~~~~-----------------~~~~g~t~L~~A~~~~--~~~~~~~Ll~ 244 (403)
.++.||||+|+..|+.+++++|++. +.+++. .+..|.||||+|+..| +.+++++|++
T Consensus 82 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 82 WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH
Confidence 4678999999999999999999998 888776 7889999999999999 9999999999
Q ss_pred cCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCC-----ccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 015680 245 KGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGAS-----LNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRD 317 (403)
Q Consensus 245 ~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~-----~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~ 317 (403)
.|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..+ |.||||+|+..|+.+++++|+++|++++..|
T Consensus 162 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d 241 (364)
T 3ljn_A 162 LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMED 241 (364)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCC
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999999999999999999988 77654 7799999999999999999999999999999
Q ss_pred CCCChHHHHHHHcCcHHHHHHHHHcCCCccc------------CCCCCCCHHHHHHHcCCHHHHHHHHHcccccc
Q 015680 318 YDHRTPLHVAASEGLYLMAKLLLEAGASVFT------------KDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQL 380 (403)
Q Consensus 318 ~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~------------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 380 (403)
..|.||||+|+..|+.+++++|+++|++++. .+..+.||++.|+..++.+.+..|++.+.+..
T Consensus 242 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~~ 316 (364)
T 3ljn_A 242 NEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEV 316 (364)
T ss_dssp TTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999877643 45678999999999999999998888877643
No 53
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.2e-33 Score=244.68 Aligned_cols=210 Identities=21% Similarity=0.233 Sum_probs=180.8
Q ss_pred cchHHHHHhhhccccchhhhhcccceee--ecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHH
Q 015680 154 DGRKVLTNLLEGKESNLRLKQVESDITF--HIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLAT 231 (403)
Q Consensus 154 ~~~~ll~~ll~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~ 231 (403)
.+...++.++..+..++...++...... ..+..+..+.||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC 86 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 3455566666666666555555443322 45566778899999999999999999999999999999999999999999
Q ss_pred HcCcHHHHHHHHhcCCC------CCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCcccc---CCCchHHHHHHcCCHHH
Q 015680 232 SRGYEDITLFLIQKGVD------INIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVD---DAGSFLCIAVARGDSDL 302 (403)
Q Consensus 232 ~~~~~~~~~~Ll~~~~~------~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~---~~~~~l~~a~~~~~~~~ 302 (403)
..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++.. .|.||||+|+..|+.++
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~ 166 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999876 4677888999999999999999999999999999876 46799999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcc--cCCCCCCCHHHHHHHc
Q 015680 303 LKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF--TKDRWGNTPLDEGRMC 363 (403)
Q Consensus 303 v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~--~~~~~g~t~l~~A~~~ 363 (403)
+++|+++|++++..|..|.||||+|+..|+.+++++|+++|++.. .++..|.||.+.+...
T Consensus 167 v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 167 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccc
Confidence 999999999999999999999999999999999999999999886 7888899998766544
No 54
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.98 E-value=3e-31 Score=233.17 Aligned_cols=178 Identities=24% Similarity=0.257 Sum_probs=159.5
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCcc-----c--cCCCchHHH
Q 015680 222 DGRSPLHLATSRGYEDITLFLIQK-GVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLN-----V--DDAGSFLCI 293 (403)
Q Consensus 222 ~g~t~L~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~-----~--~~~~~~l~~ 293 (403)
.|+||||+|+..|+.+++++|++. |++++.+|..|+||||+|+..|+.+++++|+++++++. . .+|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 589999999999999999999997 99999999999999999999999999999999998763 2 257899999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCC-------------CCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHH
Q 015680 294 AVARGDSDLLKRVLSNGVDPNSRDY-------------DHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEG 360 (403)
Q Consensus 294 a~~~~~~~~v~~Ll~~~~~~~~~~~-------------~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A 360 (403)
|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999988765 799999999999999999999999999999999999999999
Q ss_pred HHcCCHHHH----HHHHHcccccc-----ccccc---------cccchhhhhhhhcc
Q 015680 361 RMCGNKNLI----KLLEDAKCTQL-----SEFHY---------CSQGMIGIAENLLL 399 (403)
Q Consensus 361 ~~~~~~~~v----~~Ll~~~~~~~-----~~~~~---------~~~~~~~~~~~l~~ 399 (403)
+.+++.+++ ++|+++|++.. ..... +..+..++++.|+.
T Consensus 162 ~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 162 ILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp HTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999988 99999999753 11112 44556777777764
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=1.3e-31 Score=224.25 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=103.3
Q ss_pred cHHHHHHHcCChHHHHHHHHcCCC-cccc--CCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHH
Q 015680 258 TPLLEAIKCGHDGVTSLLVKEGAS-LNVD--DAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYL 334 (403)
Q Consensus 258 t~l~~A~~~~~~~~v~~L~~~~~~-~~~~--~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 334 (403)
||||.|+..|+.+++++|++.+.+ ++.. .|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 444444444444444444444433 2222 2345555555555566666666667777888889999999999999999
Q ss_pred HHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccc--------cccchhhhhhhhcc
Q 015680 335 MAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHY--------CSQGMIGIAENLLL 399 (403)
Q Consensus 335 ~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--------~~~~~~~~~~~l~~ 399 (403)
++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|++....... ...+..++++.|+.
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 84 IVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999986544322 34456666666654
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=7.5e-31 Score=219.08 Aligned_cols=158 Identities=32% Similarity=0.464 Sum_probs=149.3
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHH
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 265 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~ 265 (403)
....+.++|+.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 34556789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcC
Q 015680 266 CGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAG 343 (403)
Q Consensus 266 ~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g 343 (403)
.|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999998765 779999999999999999999999999999999999999999999999999999876
No 57
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=2.9e-31 Score=219.87 Aligned_cols=155 Identities=23% Similarity=0.323 Sum_probs=147.5
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCCh
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 269 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~ 269 (403)
..++|+.|+..|+.+++++|+++|++++..+..|+||||+|+. |+.+++++|++.|++++.+|..|.||||+|+..|+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4689999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCC
Q 015680 270 GVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVD-PNSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 345 (403)
Q Consensus 270 ~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d 345 (403)
+++++|+++|++++..+ |.||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|+++|+|
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999988765 77999999999999999999999998 699999999999999999999999999999986
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=4.2e-31 Score=220.11 Aligned_cols=158 Identities=23% Similarity=0.305 Sum_probs=151.8
Q ss_pred hHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCC
Q 015680 189 ELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 268 (403)
Q Consensus 189 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~ 268 (403)
.+.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCc
Q 015680 269 DGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASV 346 (403)
Q Consensus 269 ~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~ 346 (403)
.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|++++++.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999999999998765 779999999999999999999999999999999999999999999999999999987665
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-30 Score=213.57 Aligned_cols=147 Identities=28% Similarity=0.425 Sum_probs=98.5
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHH
Q 015680 225 SPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDL 302 (403)
Q Consensus 225 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~ 302 (403)
|+||.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.++
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 82 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI 82 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHH
Confidence 44444444444444444444444443 24444455555555445555555554444444332 3455555555556666
Q ss_pred HHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHH
Q 015680 303 LKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLL 372 (403)
Q Consensus 303 v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~L 372 (403)
+++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|
T Consensus 83 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 83 VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 6666666777788888899999999999999999999999999998889999999999999999998887
No 60
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=3.9e-31 Score=219.81 Aligned_cols=156 Identities=29% Similarity=0.329 Sum_probs=105.0
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHh-cCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHc
Q 015680 221 YDGRSPLHLATSRGYEDITLFLIQ-KGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVAR 297 (403)
Q Consensus 221 ~~g~t~L~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~ 297 (403)
..+.||||.|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHc
Confidence 334455555555555555555554 233444444455555555555555555555555555554433 34555555556
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 015680 298 GDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKC 377 (403)
Q Consensus 298 ~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 377 (403)
|+.+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. ++.+++++|+++|+
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 86 GHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 66666667777777788888888999999999999999999999999999899999999998766 88899999988876
No 61
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=4.8e-31 Score=225.03 Aligned_cols=161 Identities=25% Similarity=0.290 Sum_probs=153.8
Q ss_pred cCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHH
Q 015680 183 IGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLE 262 (403)
Q Consensus 183 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 262 (403)
.+..+..+.||||+|+..|+.+++++|++.+++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 34567778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHH
Q 015680 263 AIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLL 340 (403)
Q Consensus 263 A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll 340 (403)
|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 999999999999999999998866 779999999999999999999999999999999999999999999999999999
Q ss_pred HcC
Q 015680 341 EAG 343 (403)
Q Consensus 341 ~~g 343 (403)
++|
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 864
No 62
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=4.5e-30 Score=220.44 Aligned_cols=181 Identities=24% Similarity=0.245 Sum_probs=163.3
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCC-CCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHH
Q 015680 220 DYDGRSPLHLATSRGYEDITLFLIQKGV-DINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVA 296 (403)
Q Consensus 220 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~ 296 (403)
+..+.||||.|+..|+.+.++.|++.+. +++..|..|+||||+|+..|+.+++++|+++|++++..+ +.||||+|+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 3568899999999999999999999876 999999999999999999999999999999999998766 6799999999
Q ss_pred cCCHHHHHHHH-HCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcC-CCcccCCCCCCCHHHHHHHcCC-----HHHH
Q 015680 297 RGDSDLLKRVL-SNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAG-ASVFTKDRWGNTPLDEGRMCGN-----KNLI 369 (403)
Q Consensus 297 ~~~~~~v~~Ll-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g-~d~~~~~~~g~t~l~~A~~~~~-----~~~v 369 (403)
.|+.+++++|+ ..+++++..|..|.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..++ .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 99999999999 677899999999999999999999999999999999 9999999999999999999998 9999
Q ss_pred HHHHHccccccccccc--------cccchhhhhhhhccc
Q 015680 370 KLLEDAKCTQLSEFHY--------CSQGMIGIAENLLLL 400 (403)
Q Consensus 370 ~~Ll~~~~~~~~~~~~--------~~~~~~~~~~~l~~~ 400 (403)
++|+++|++.-..... ...+..++++.|+..
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 9999999986544322 345567777777653
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3.8e-31 Score=236.15 Aligned_cols=178 Identities=24% Similarity=0.233 Sum_probs=157.6
Q ss_pred CCCcHHHHHHHcCcHH----HHHHHHhcCCCCCc----CCCCCCcHHHHHHHc---CChHHHHHHHHcCCCccc------
Q 015680 222 DGRSPLHLATSRGYED----ITLFLIQKGVDINI----KDKFGNTPLLEAIKC---GHDGVTSLLVKEGASLNV------ 284 (403)
Q Consensus 222 ~g~t~L~~A~~~~~~~----~~~~Ll~~~~~~~~----~~~~g~t~l~~A~~~---~~~~~v~~L~~~~~~~~~------ 284 (403)
.|+||||.|+..|+.+ ++++|++.|++++. +|..|+||||+|+.. |+.+++++|+++|++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 4789999999999997 66777789999998 899999999999999 999999999999877653
Q ss_pred -------cCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CChHHHHHHHcCcHHHHHHHHH---
Q 015680 285 -------DDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYD-------------HRTPLHVAASEGLYLMAKLLLE--- 341 (403)
Q Consensus 285 -------~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~-------------g~t~Lh~A~~~~~~~~~~~Ll~--- 341 (403)
.+|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 34889999999999999999999999999999886 9999999999999999999999
Q ss_pred cCCCcccCCCCCCCHHHHHHH--cCCHH-------HHHHHHHccccc-------cccccc--------cccchhhhhhhh
Q 015680 342 AGASVFTKDRWGNTPLDEGRM--CGNKN-------LIKLLEDAKCTQ-------LSEFHY--------CSQGMIGIAENL 397 (403)
Q Consensus 342 ~g~d~~~~~~~g~t~l~~A~~--~~~~~-------~v~~Ll~~~~~~-------~~~~~~--------~~~~~~~~~~~l 397 (403)
+|++++.+|..|.||||+|+. +++.+ ++++|+++|++. -..... +..+..++++.|
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L 240 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI 240 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHH
Confidence 999999999999999999999 88998 999999999987 222211 445566777777
Q ss_pred cc
Q 015680 398 LL 399 (403)
Q Consensus 398 ~~ 399 (403)
+.
T Consensus 241 l~ 242 (256)
T 2etb_A 241 LQ 242 (256)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.4e-30 Score=219.50 Aligned_cols=159 Identities=26% Similarity=0.333 Sum_probs=92.0
Q ss_pred HhhhHHHhhccCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCC
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRA-GADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 268 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~ 268 (403)
+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 34455555555555555555555 34455555555555555555555555555555555555555555555555555555
Q ss_pred hHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCccc
Q 015680 269 DGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFT 348 (403)
Q Consensus 269 ~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~ 348 (403)
.++++ +|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 85 ~~~v~-------------------------------~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 85 RDIVQ-------------------------------KLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHH-------------------------------HHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHH-------------------------------HHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 55554 55555555555555666666666666666666666666666666
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 349 KDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 349 ~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
+|..|.||||+|+..++.+++++|+++|++.
T Consensus 134 ~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 134 CNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp CCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred hccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 6666666666666666666666666666553
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.1e-30 Score=220.20 Aligned_cols=127 Identities=23% Similarity=0.238 Sum_probs=94.2
Q ss_pred CCcHHHHHHHcCChHHHHHHHHc-CCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCc
Q 015680 256 GNTPLLEAIKCGHDGVTSLLVKE-GASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGL 332 (403)
Q Consensus 256 g~t~l~~A~~~~~~~~v~~L~~~-~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~ 332 (403)
+.+|||.|+..|+.+++++|++. +.+++..+ |.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGH 84 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 34444444444444444444444 22233222 3345555555555666666667777888888999999999999999
Q ss_pred HHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 333 YLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 333 ~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++....
T Consensus 85 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 134 (179)
T 3f6q_A 85 RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC 134 (179)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh
Confidence 99999999999999999999999999999999999999999999986543
No 66
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=1.1e-31 Score=248.39 Aligned_cols=194 Identities=19% Similarity=0.197 Sum_probs=149.7
Q ss_pred hhHHHhhccCCHHHHHHHHHcCCCccc-cCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCC--
Q 015680 192 LRFNSAAYHGDLYQLKGLIRAGADLNK-TDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH-- 268 (403)
Q Consensus 192 ~~l~~a~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~-- 268 (403)
..+|.|+..+..++++.|++.|++++. .+..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~ 178 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNY 178 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccc
Confidence 346778888888899999999999998 78999999999999999999999999999999999999999999999888
Q ss_pred -hHHHHHHHHcC-CCccccC--CCchHHHHHH----cCCHHHHHHHHHC--------------------CCCCCCCCCCC
Q 015680 269 -DGVTSLLVKEG-ASLNVDD--AGSFLCIAVA----RGDSDLLKRVLSN--------------------GVDPNSRDYDH 320 (403)
Q Consensus 269 -~~~v~~L~~~~-~~~~~~~--~~~~l~~a~~----~~~~~~v~~Ll~~--------------------~~~~~~~~~~g 320 (403)
.++++.|++.+ ++++..+ |.||||+|+. .|+.+++++|++. |++++..+..|
T Consensus 179 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g 258 (327)
T 1sw6_A 179 DSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258 (327)
T ss_dssp HTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred cHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence 67777777775 5566544 7799999998 8899999999876 88888899999
Q ss_pred ChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccccccccccchhhhh
Q 015680 321 RTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSEFHYCSQGMIGIA 394 (403)
Q Consensus 321 ~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 394 (403)
.||||.|+. +++|+++ +++.+|..|.||||+|+.+|+.++|++|+++|++.-... ..+.+++.++
T Consensus 259 ~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d-~~G~TpL~~A 323 (327)
T 1sw6_A 259 KDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN-KSGLRPVDFG 323 (327)
T ss_dssp -CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCC-TTSCCGGGGT
T ss_pred CChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCCCHHHHH
Confidence 999999985 8888888 577788999999999999999999999999999865553 4456666554
No 67
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=4.6e-31 Score=244.17 Aligned_cols=175 Identities=20% Similarity=0.173 Sum_probs=152.1
Q ss_pred ecCc-chhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCc---HHHHHHHHhcC-CCCCcCCCCC
Q 015680 182 HIGK-HEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGY---EDITLFLIQKG-VDINIKDKFG 256 (403)
Q Consensus 182 ~~~~-~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~---~~~~~~Ll~~~-~~~~~~~~~g 256 (403)
.++. .+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+ .++++.|++.+ ++++.+|..|
T Consensus 122 dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g 201 (327)
T 1sw6_A 122 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN 201 (327)
T ss_dssp CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTC
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCC
Confidence 3444 67789999999999999999999999999999999999999999999998 68888888876 7799999999
Q ss_pred CcHHHHHHH----cCChHHHHHHHHc--------------------CCCccccC--CCchHHHHHHcCCHHHHHHHHHCC
Q 015680 257 NTPLLEAIK----CGHDGVTSLLVKE--------------------GASLNVDD--AGSFLCIAVARGDSDLLKRVLSNG 310 (403)
Q Consensus 257 ~t~l~~A~~----~~~~~~v~~L~~~--------------------~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~ 310 (403)
+||||+|+. .|+.+++++|++. |++++..+ |.||||+|+. +++|++.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~- 274 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN- 274 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH-
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh-
Confidence 999999999 8999999999987 77777655 6799999996 8999988
Q ss_pred CCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcC
Q 015680 311 VDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCG 364 (403)
Q Consensus 311 ~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~ 364 (403)
+++.+|..|+||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+.+|
T Consensus 275 -~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 275 -MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred -CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 68889999999999999999999999999999999999999999999998765
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=7.6e-30 Score=209.31 Aligned_cols=149 Identities=28% Similarity=0.410 Sum_probs=143.0
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCCh
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 269 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~ 269 (403)
..++|+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 4689999999999999999999999886 588899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHH
Q 015680 270 GVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLL 339 (403)
Q Consensus 270 ~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~L 339 (403)
+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999998876 77999999999999999999999999999999999999999999999999987
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=4.2e-30 Score=211.50 Aligned_cols=150 Identities=29% Similarity=0.373 Sum_probs=108.7
Q ss_pred CcHHHHHHHcCcHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCH
Q 015680 224 RSPLHLATSRGYEDITLFLIQK-GVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDS 300 (403)
Q Consensus 224 ~t~L~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~ 300 (403)
.||||.|+..|+.+++++|++. +.+++..|..|.||||+ +..|+.+++++|+++|++++..+ |.||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 81 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL 81 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH
Confidence 3555555555555555555554 22555555555566655 55555555665555555555443 44666666666666
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 015680 301 DLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA 375 (403)
Q Consensus 301 ~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 375 (403)
+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+.+|+.+++++|+++
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 82 DTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 777777777778888888899999999999999999999988 89999999999999999999999999999865
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.2e-33 Score=247.86 Aligned_cols=190 Identities=20% Similarity=0.188 Sum_probs=173.2
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAI 264 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 264 (403)
..+..+.++||.|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~ 95 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA 95 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHcCCCcccc---CCCchHHHH--HHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHH
Q 015680 265 KCGHDGVTSLLVKEGASLNVD---DAGSFLCIA--VARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLL 339 (403)
Q Consensus 265 ~~~~~~~v~~L~~~~~~~~~~---~~~~~l~~a--~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~L 339 (403)
..|+.+++++|+++|++++.. +|.||||+| +..|+.+++++|++.|++++..|..|.||+|.++..+. .++|
T Consensus 96 ~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~l 172 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DELS 172 (229)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBCC
T ss_pred HcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---cccC
Confidence 999999999999999999875 578999999 99999999999999999999999999999997665543 3677
Q ss_pred HHcCCC--cccCCCCCCCHHHHHHHcCCHHHHHH-HHHccc
Q 015680 340 LEAGAS--VFTKDRWGNTPLDEGRMCGNKNLIKL-LEDAKC 377 (403)
Q Consensus 340 l~~g~d--~~~~~~~g~t~l~~A~~~~~~~~v~~-Ll~~~~ 377 (403)
++.|++ ++.+|..|.||||+|+.+|+.++|+. +++..+
T Consensus 173 l~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l~~~p 213 (229)
T 2vge_A 173 FREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFP 213 (229)
T ss_dssp BCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGEESSC
T ss_pred ccccccccccccCCCcccHHHHHHHcCCcceeehhhhhhCC
Confidence 888998 67889999999999999999999984 444443
No 71
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=5.2e-31 Score=237.58 Aligned_cols=205 Identities=18% Similarity=0.221 Sum_probs=159.5
Q ss_pred cchHHHHHhhhccccchhhhhcccc--eeeecC----cchhhHhhhHHHhhcc---CCHHHHHHHHHcCCCc-------c
Q 015680 154 DGRKVLTNLLEGKESNLRLKQVESD--ITFHIG----KHEAELALRFNSAAYH---GDLYQLKGLIRAGADL-------N 217 (403)
Q Consensus 154 ~~~~ll~~ll~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~l~~a~~~---~~~~~~~~ll~~~~~~-------~ 217 (403)
.+...+..++..+..++...++... ...... ..+..+.||||+|+.. |+.+++++|++.|+++ +
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 3445555555555555444443321 111111 2367889999999986 9999999999987542 2
Q ss_pred c----cCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCC--------------CCCcHHHHHHHcCChHHHHHHHH--
Q 015680 218 K----TDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDK--------------FGNTPLLEAIKCGHDGVTSLLVK-- 277 (403)
Q Consensus 218 ~----~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~--------------~g~t~l~~A~~~~~~~~v~~L~~-- 277 (403)
. .+..|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|++
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2 566899999999999999999999999999999987 79999999999999999999999
Q ss_pred -cCCCccccC--CCchHHHHHHcCC---------HHHHHHHHHCCCCCC-------CCCCCCChHHHHHHHcCcHHHHHH
Q 015680 278 -EGASLNVDD--AGSFLCIAVARGD---------SDLLKRVLSNGVDPN-------SRDYDHRTPLHVAASEGLYLMAKL 338 (403)
Q Consensus 278 -~~~~~~~~~--~~~~l~~a~~~~~---------~~~v~~Ll~~~~~~~-------~~~~~g~t~Lh~A~~~~~~~~~~~ 338 (403)
+|++++..+ |.||||+|+..|+ .+++++|++.|++++ .+|..|+||||+|+..|+.+++++
T Consensus 172 ~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~ 251 (273)
T 2pnn_A 172 WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAY 251 (273)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHH
Confidence 899998765 7799999999998 899999999999986 489999999999999999999999
Q ss_pred HHHcCC-CcccCCCCCCCHHH
Q 015680 339 LLEAGA-SVFTKDRWGNTPLD 358 (403)
Q Consensus 339 Ll~~g~-d~~~~~~~g~t~l~ 358 (403)
|+++|+ |+......+.+|-+
T Consensus 252 Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 252 ILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHTC--------------
T ss_pred HHHCCCCCchhhhhhhhhccC
Confidence 999999 88877777776644
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=6.2e-30 Score=212.55 Aligned_cols=157 Identities=32% Similarity=0.443 Sum_probs=146.2
Q ss_pred hhhHhhhHHHhhccCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHH
Q 015680 187 EAELALRFNSAAYHGDLYQLKGLIRA-GADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 265 (403)
Q Consensus 187 ~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~ 265 (403)
+.++.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 55788999999999999999999985 46777888899999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcC
Q 015680 266 CGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAG 343 (403)
Q Consensus 266 ~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g 343 (403)
.|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+. |+.+++++|+++|
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhcc
Confidence 999999999999999998766 6799999999999999999999999999999999999999877 8999999999988
Q ss_pred C
Q 015680 344 A 344 (403)
Q Consensus 344 ~ 344 (403)
+
T Consensus 164 A 164 (165)
T 3twr_A 164 A 164 (165)
T ss_dssp -
T ss_pred c
Confidence 6
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=6.3e-29 Score=204.41 Aligned_cols=151 Identities=25% Similarity=0.379 Sum_probs=143.8
Q ss_pred HhhhHHHhhccCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCC
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRA-GADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGH 268 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~ 268 (403)
+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 46899999999999999999998 35899999999999999 99999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHc
Q 015680 269 DGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEA 342 (403)
Q Consensus 269 ~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 342 (403)
.+++++|+++|++++..+ |.||||+|+..|+.+++++|++. ++++..|..|.||||+|+..|+.+++++|+++
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999998765 77999999999999999999999 99999999999999999999999999999874
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.8e-30 Score=229.37 Aligned_cols=188 Identities=15% Similarity=0.097 Sum_probs=131.7
Q ss_pred hhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcC
Q 015680 188 AELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCG 267 (403)
Q Consensus 188 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~ 267 (403)
..|.||||.|+..++.+.++.++++|++++.. ..|.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 35788999999999999999999999888754 67889999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-hHHHHH--HHcCcHHHHHHHHHc
Q 015680 268 HDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHR-TPLHVA--ASEGLYLMAKLLLEA 342 (403)
Q Consensus 268 ~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~-t~Lh~A--~~~~~~~~~~~Ll~~ 342 (403)
+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|++++..+..|. ||||+| +..|+.+++++|+++
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 9999999999999888765 67999999999999999999999999998887776 999998 778889999999998
Q ss_pred CCCcccC---------CCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 015680 343 GASVFTK---------DRWGNTPLDEGRMCGNKNLIKLLEDAKCT 378 (403)
Q Consensus 343 g~d~~~~---------~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 378 (403)
|++++.. +..+.+++++|...|. +++.|.+.+.+
T Consensus 162 ~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~ 204 (239)
T 1ycs_B 162 QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDED 204 (239)
T ss_dssp HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTS
T ss_pred hhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCC
Confidence 8887655 5568888888888886 44555544443
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=7.3e-30 Score=228.32 Aligned_cols=161 Identities=20% Similarity=0.261 Sum_probs=146.9
Q ss_pred hhhHhhhHHHhh---ccCCHHHHHHHHHcCCC-----------ccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcC
Q 015680 187 EAELALRFNSAA---YHGDLYQLKGLIRAGAD-----------LNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIK 252 (403)
Q Consensus 187 ~~~~~~~l~~a~---~~~~~~~~~~ll~~~~~-----------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~ 252 (403)
+..|.||||+|+ ..|+.+++++|++.|++ ++..+..|+||||+|+..|+.+++++|+++|++++.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 366899999999 78999999999998743 3444558999999999999999999999999999999
Q ss_pred C--------------CCCCcHHHHHHHcCChHHHHHHHH---cCCCccccC--CCchHHHHHHcCC---------HHHHH
Q 015680 253 D--------------KFGNTPLLEAIKCGHDGVTSLLVK---EGASLNVDD--AGSFLCIAVARGD---------SDLLK 304 (403)
Q Consensus 253 ~--------------~~g~t~l~~A~~~~~~~~v~~L~~---~~~~~~~~~--~~~~l~~a~~~~~---------~~~v~ 304 (403)
+ ..|.||||+|+..|+.+++++|++ +|++++..+ |.||||+|+..++ .++++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~ 202 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYD 202 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHH
Confidence 8 689999999999999999999999 899998865 7799999999888 79999
Q ss_pred HHHHCCCCC-------CCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcc
Q 015680 305 RVLSNGVDP-------NSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVF 347 (403)
Q Consensus 305 ~Ll~~~~~~-------~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~ 347 (403)
+|++.|+++ +..|..|+||||+|+..|+.+++++|+++|++..
T Consensus 203 ~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 203 LLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 999999988 6799999999999999999999999999988764
No 76
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=8.5e-29 Score=223.37 Aligned_cols=161 Identities=22% Similarity=0.293 Sum_probs=152.7
Q ss_pred cCcchhhHhhhHHHhhccCCHHHHHHHHHcCC-CccccCCCCCcHHHHHH-----HcCcHHHHHHHHhcCCCCCcCCCCC
Q 015680 183 IGKHEAELALRFNSAAYHGDLYQLKGLIRAGA-DLNKTDYDGRSPLHLAT-----SRGYEDITLFLIQKGVDINIKDKFG 256 (403)
Q Consensus 183 ~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~-----~~~~~~~~~~Ll~~~~~~~~~~~~g 256 (403)
.+..+..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+ ..++.+++++|++.|.+++..+..|
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 45667889999999999999999999999998 89999999999999999 6789999999999999999999999
Q ss_pred CcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCChHHHHHHHcCcH
Q 015680 257 NTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLS-NGVDPNSRDYDHRTPLHVAASEGLY 333 (403)
Q Consensus 257 ~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~Lh~A~~~~~~ 333 (403)
+||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..|+.
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQS 263 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCH
Confidence 999999999999999999999999998765 7799999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 015680 334 LMAKLLLEAG 343 (403)
Q Consensus 334 ~~~~~Ll~~g 343 (403)
+++++|++++
T Consensus 264 ~iv~~Ll~~~ 273 (276)
T 4hbd_A 264 EIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcc
Confidence 9999999864
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.3e-29 Score=223.86 Aligned_cols=160 Identities=23% Similarity=0.238 Sum_probs=119.4
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHc
Q 015680 220 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVAR 297 (403)
Q Consensus 220 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~ 297 (403)
+..|.||||.|+..++.++++.|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 346899999999999999999999999999854 778999999999999999999999999988765 77999999999
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCC-CHHHHH--HHcCCHHHHHHHHH
Q 015680 298 GDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGN-TPLDEG--RMCGNKNLIKLLED 374 (403)
Q Consensus 298 ~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~-t~l~~A--~~~~~~~~v~~Ll~ 374 (403)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|. ||||+| +.+|+.+++++|++
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998887 999999 88999999999999
Q ss_pred cccccc
Q 015680 375 AKCTQL 380 (403)
Q Consensus 375 ~~~~~~ 380 (403)
+|++.-
T Consensus 161 ~~a~~~ 166 (239)
T 1ycs_B 161 VQEKMG 166 (239)
T ss_dssp HHHHTT
T ss_pred hhhccc
Confidence 998754
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.7e-28 Score=197.07 Aligned_cols=131 Identities=24% Similarity=0.357 Sum_probs=91.3
Q ss_pred CCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CChH
Q 015680 247 VDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYD-HRTP 323 (403)
Q Consensus 247 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~ 323 (403)
++++.++..|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+. |+.+++++|++.|++++.+|.. |+||
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRP 81 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCH
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCH
Confidence 3444444445555555555555555555555444444332 3455555555 5555666666666677777777 8889
Q ss_pred HHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 015680 324 LHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCT 378 (403)
Q Consensus 324 Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 378 (403)
||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+++.+++++|+++|+|
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999988889999999988888888888889999999999999999999888875
No 79
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=5.5e-28 Score=194.07 Aligned_cols=132 Identities=24% Similarity=0.281 Sum_probs=126.0
Q ss_pred CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC---CCc
Q 015680 213 GADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---AGS 289 (403)
Q Consensus 213 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~---~~~ 289 (403)
+++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++..+ |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 46788899999999999999999999999999999999999999999999999 99999999999999988765 679
Q ss_pred hHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCC
Q 015680 290 FLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 345 (403)
Q Consensus 290 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d 345 (403)
|||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|+|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999986
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=3.1e-28 Score=200.34 Aligned_cols=143 Identities=22% Similarity=0.211 Sum_probs=110.5
Q ss_pred cccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCc-hHHH
Q 015680 217 NKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGS-FLCI 293 (403)
Q Consensus 217 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~-~l~~ 293 (403)
+..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+ .|+.+++++|+++|++++..+ |.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 345677889999999999999999999999999999999999999985 888999999999988888765 566 9999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHH
Q 015680 294 AVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEG 360 (403)
Q Consensus 294 a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A 360 (403)
|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||.+-+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999987744
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=3e-28 Score=206.06 Aligned_cols=161 Identities=23% Similarity=0.317 Sum_probs=135.2
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCCccccC-CCCCcHHHHHHHcCcH----HHHHHHHhcCCCCCcCCCCCCcHHHHHH
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGADLNKTD-YDGRSPLHLATSRGYE----DITLFLIQKGVDINIKDKFGNTPLLEAI 264 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~----~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 264 (403)
+.++|+.|+..|+.+.++.++..+.+ ..+ ..|+||||+|+..|+. +++++|++.|+++|.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 44678899999999999888887643 344 6688999999988864 5899999999999999999999999998
Q ss_pred HcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-hHHHHHHHcC-----cHHHHHH
Q 015680 265 KCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHR-TPLHVAASEG-----LYLMAKL 338 (403)
Q Consensus 265 ~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~-t~Lh~A~~~~-----~~~~~~~ 338 (403)
..|+.++.+ ..+++++|+++|++++.+|..|+ ||||+|+..+ +.+++++
T Consensus 84 ~~~~~~~~~-------------------------~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~ 138 (186)
T 3t8k_A 84 QGGGNDITG-------------------------TTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKL 138 (186)
T ss_dssp HHCTTCHHH-------------------------HHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHH
T ss_pred HcCCcchhh-------------------------HHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHH
Confidence 887654432 24788899999999999999999 9999999844 4679999
Q ss_pred HHH-cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 015680 339 LLE-AGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKC 377 (403)
Q Consensus 339 Ll~-~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 377 (403)
|++ +|+|++.+|..|.||||+|+..|+.++|++|+++..
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 999 999999999999999999999999999999987754
No 82
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=6.9e-29 Score=217.49 Aligned_cols=170 Identities=17% Similarity=0.102 Sum_probs=146.6
Q ss_pred HHHHHHcCCCccccC---CCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCc
Q 015680 206 LKGLIRAGADLNKTD---YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASL 282 (403)
Q Consensus 206 ~~~ll~~~~~~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 282 (403)
++.|+++|++++..+ ..+.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 456888888876544 45668899999999999999999999999999999999999999999999999999999999
Q ss_pred cccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCC-CCCChHHHHH--HHcCcHHHHHHHHHcCCCcccCCCCCCCHH
Q 015680 283 NVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRD-YDHRTPLHVA--ASEGLYLMAKLLLEAGASVFTKDRWGNTPL 357 (403)
Q Consensus 283 ~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~-~~g~t~Lh~A--~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l 357 (403)
+..+ |.||||+|+..|+.+++++|++.|++++..+ ..|+||||+| +..|+.+++++|+++|++++.+|..|.||+
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 8765 7799999999999999999999999999987 6999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcccc
Q 015680 358 DEGRMCGNKNLIKLLEDAKCT 378 (403)
Q Consensus 358 ~~A~~~~~~~~v~~Ll~~~~~ 378 (403)
+.++..+.. ++|++.|++
T Consensus 161 ~~~~~~~~~---~~ll~~ga~ 178 (229)
T 2vge_A 161 WDYSAEFGD---ELSFREGES 178 (229)
T ss_dssp SCBCCSSTT---BCCBCTTCE
T ss_pred HHHhhcccc---ccCcccccc
Confidence 966655533 677888886
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=5.7e-26 Score=179.29 Aligned_cols=125 Identities=44% Similarity=0.660 Sum_probs=90.5
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHH
Q 015680 223 GRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDL 302 (403)
Q Consensus 223 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~ 302 (403)
|+||||+|+..|+.+++++|++.|++++..+..|.||||+|+.. ++.++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~-------------------------------~~~~~ 50 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN-------------------------------GHLEV 50 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH-------------------------------TCHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc-------------------------------CcHHH
Confidence 45555555555555555555555555555555555555555554 45555
Q ss_pred HHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccc
Q 015680 303 LKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCT 378 (403)
Q Consensus 303 v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~ 378 (403)
+++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 51 ~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 51 VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 5556666667777778888888888888888888888888888888888888888888888888888888888875
No 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=5.2e-29 Score=233.10 Aligned_cols=204 Identities=15% Similarity=0.010 Sum_probs=141.1
Q ss_pred hhHhhhHHHhhccCCHHHHHHHHHcCCCc---cccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCC---CcCCCCCCcHHH
Q 015680 188 AELALRFNSAAYHGDLYQLKGLIRAGADL---NKTDYDGRSPLHLATSRGYEDITLFLIQKGVDI---NIKDKFGNTPLL 261 (403)
Q Consensus 188 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~g~t~l~ 261 (403)
.++.||||+|+..|+.+++++|+++|+.. +..+..|.||||+|+..|+.++|++|+++|+++ +..+.. .||||
T Consensus 90 ~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh 168 (376)
T 2aja_A 90 IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFR 168 (376)
T ss_dssp CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHH
T ss_pred CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHH
Confidence 34568999999999999999999888622 233456778999999999999999999988752 222223 88999
Q ss_pred HHHHcCChHHHHHHHHcCCCccc--cC--CCchHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHH
Q 015680 262 EAIKCGHDGVTSLLVKEGASLNV--DD--AGSFLCIAV-ARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMA 336 (403)
Q Consensus 262 ~A~~~~~~~~v~~L~~~~~~~~~--~~--~~~~l~~a~-~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~ 336 (403)
+|+..|+.++|++|+++|++++. .+ |.||||+|+ ..|+.+++++|++.|+ .|.||||+|+..|+.+++
T Consensus 169 ~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 169 LAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp HHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHH
T ss_pred HHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHH
Confidence 99999999999999999888654 33 678999999 9999999999988764 378999999999988888
Q ss_pred HHHHHcCCCcc-------------------------------------------------------------cCCCCCCC
Q 015680 337 KLLLEAGASVF-------------------------------------------------------------TKDRWGNT 355 (403)
Q Consensus 337 ~~Ll~~g~d~~-------------------------------------------------------------~~~~~g~t 355 (403)
++|+++|++++ .....+.|
T Consensus 242 ~lL~~~ga~~~~~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~ 321 (376)
T 2aja_A 242 PFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANE 321 (376)
T ss_dssp HHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCH
T ss_pred HHHHhcCcccccccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccH
Confidence 88887654321 11234568
Q ss_pred HHHHHHHcCCHHHHHHHHHcccccc-----ccccccccchhhhhhhhcc
Q 015680 356 PLDEGRMCGNKNLIKLLEDAKCTQL-----SEFHYCSQGMIGIAENLLL 399 (403)
Q Consensus 356 ~l~~A~~~~~~~~v~~Ll~~~~~~~-----~~~~~~~~~~~~~~~~l~~ 399 (403)
|||+|+.+|+.+++++|+++|.... .......++.+++.+.-+.
T Consensus 322 ~L~~A~~~g~~e~v~lLl~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (376)
T 2aja_A 322 LLRLALRLGNQGACALLLSIPSVLALTKANNYYINETGGRLDLRAVALE 370 (376)
T ss_dssp HHHHHHHHTCTTHHHHHTTSHHHHHSCC---------------------
T ss_pred HHHHHHHcCcHHHHHHHHcChHHHHHHHHhccccccccccccHHHHHHH
Confidence 8999999999999999998865211 1122244556666554443
No 85
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=4.5e-26 Score=182.86 Aligned_cols=125 Identities=36% Similarity=0.502 Sum_probs=91.0
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCH
Q 015680 221 YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDS 300 (403)
Q Consensus 221 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~ 300 (403)
..+.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~------------------------------- 60 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHL------------------------------- 60 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-------------------------------
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-------------------------------
Confidence 3355666666666666666666666666666666666666666655554
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcc
Q 015680 301 DLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAK 376 (403)
Q Consensus 301 ~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 376 (403)
+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|
T Consensus 61 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 61 EIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 5555555556667777778888888888888888888888888888888888888888888888888888888775
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=7.5e-27 Score=192.07 Aligned_cols=142 Identities=21% Similarity=0.269 Sum_probs=117.3
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCc-HHHHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNT-PLLEA 263 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t-~l~~A 263 (403)
..+..+.++||+|+..|+.+++++|+++|++++..+..|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 44566789999999999999999999999999999999999999995 89999999999999999999999999 99999
Q ss_pred HHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHH
Q 015680 264 IKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVA 327 (403)
Q Consensus 264 ~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A 327 (403)
+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|+++|++++..+..|.||.+-+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 99999999999999999998765 77999999999999999999999999999999999998754
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.7e-25 Score=176.61 Aligned_cols=125 Identities=46% Similarity=0.648 Sum_probs=107.8
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCCh
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 269 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~ 269 (403)
|.||||.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999998887776
Q ss_pred HHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCC
Q 015680 270 GVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGAS 345 (403)
Q Consensus 270 ~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d 345 (403)
+++++|+++ |++++..|..|.||||+|+..|+.+++++|+++|+|
T Consensus 82 ~~~~~Ll~~-------------------------------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 82 EVVKLLLEA-------------------------------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHT-------------------------------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHc-------------------------------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 666666555 445556667777777777777777777777777765
No 88
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=2.3e-28 Score=228.74 Aligned_cols=175 Identities=13% Similarity=0.047 Sum_probs=151.3
Q ss_pred HhhhHHHhhc-cCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCC---CcCCCCCCcHHHHHHH
Q 015680 190 LALRFNSAAY-HGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDI---NIKDKFGNTPLLEAIK 265 (403)
Q Consensus 190 ~~~~l~~a~~-~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~g~t~l~~A~~ 265 (403)
+.+.+++|.. .++.+++++++++|.+. .||||+|+..|+.+++++|++.|+.. +..+..|.||||+|+.
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHH
Confidence 4567888777 57889999999987654 49999999999999999999998732 2344568899999999
Q ss_pred cCChHHHHHHHHcCCC-----ccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCChHHHHHH-HcCcHHHHH
Q 015680 266 CGHDGVTSLLVKEGAS-----LNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNS--RDYDHRTPLHVAA-SEGLYLMAK 337 (403)
Q Consensus 266 ~~~~~~v~~L~~~~~~-----~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~--~~~~g~t~Lh~A~-~~~~~~~~~ 337 (403)
.|+.++|++|+++|++ ++..+ .||||+|+..|+.+++++|+++|++++. .|..|.||||+|+ ..|+.++++
T Consensus 138 ~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred cCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 9999999999999975 33444 7999999999999999999999999877 8888999999999 999999999
Q ss_pred HHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 338 LLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 338 ~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
+|++.|+ .|.||||+|+.+|+.+++++|+++|++.
T Consensus 217 ~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 217 FLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp HHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred HHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 9999874 2889999999999999999999999854
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.8e-25 Score=179.39 Aligned_cols=128 Identities=33% Similarity=0.453 Sum_probs=105.4
Q ss_pred cchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHH
Q 015680 185 KHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAI 264 (403)
Q Consensus 185 ~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~ 264 (403)
.....+.++||.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcC
Q 015680 265 KCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAG 343 (403)
Q Consensus 265 ~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g 343 (403)
..|+.+++++|+++|+ +++..|..|.||||+|+..|+.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~~g~-------------------------------~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGA-------------------------------DVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTC-------------------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCC-------------------------------CCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8887777776666555 44555556666666666666666666666654
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.9e-26 Score=185.22 Aligned_cols=133 Identities=35% Similarity=0.426 Sum_probs=85.2
Q ss_pred CCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccCCCchHHH
Q 015680 214 ADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCI 293 (403)
Q Consensus 214 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~ 293 (403)
+|+ .++..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~--------------------- 59 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV--------------------- 59 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH---------------------
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHH---------------------
Confidence 444 4556666666666666666666666666666666666666666666655555555
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 015680 294 AVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLE 373 (403)
Q Consensus 294 a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 373 (403)
++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|.
T Consensus 60 ----------~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 60 ----------ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp ----------HHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred ----------HHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 5555555566666777777777777777777777777777777777777777777777777777777776
Q ss_pred Hcccc
Q 015680 374 DAKCT 378 (403)
Q Consensus 374 ~~~~~ 378 (403)
+++..
T Consensus 130 ~~~~s 134 (137)
T 3c5r_A 130 KNESS 134 (137)
T ss_dssp -----
T ss_pred ccccC
Confidence 65543
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=4.2e-27 Score=198.96 Aligned_cols=137 Identities=24% Similarity=0.280 Sum_probs=109.3
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC---CCchHHHHHHc
Q 015680 221 YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---AGSFLCIAVAR 297 (403)
Q Consensus 221 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~---~~~~l~~a~~~ 297 (403)
..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+ |.||||+|+..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhc
Confidence 456777777777777777777777 77777777777778877777777777777777777776544 56788888888
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 015680 298 GDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA 375 (403)
Q Consensus 298 ~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 375 (403)
|+.+++++|+++|++++.+|..|+||||+|+..++. ..+.+||++|+..|+.+++++|.++
T Consensus 121 ~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 121 VRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 888888888888888888999999999999875432 4567899999999999999998765
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.1e-25 Score=180.84 Aligned_cols=128 Identities=23% Similarity=0.313 Sum_probs=105.6
Q ss_pred chhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHH
Q 015680 186 HEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIK 265 (403)
Q Consensus 186 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~ 265 (403)
.+..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 85 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAK 85 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHH
Confidence 46678999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCC
Q 015680 266 CGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGA 344 (403)
Q Consensus 266 ~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~ 344 (403)
.|+.+++++|+++ |++++..|..|.||||+|+..+..+++++|.+++.
T Consensus 86 ~~~~~~v~~Ll~~-------------------------------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 86 NGHVDIVKLLLSY-------------------------------GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp TTCHHHHHHHHHT-------------------------------TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred cCCHHHHHHHHHc-------------------------------CCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 8776666666555 45556666777777777777777777766665543
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=3.1e-25 Score=196.26 Aligned_cols=140 Identities=24% Similarity=0.285 Sum_probs=101.8
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC---CCchHHHHHHc
Q 015680 221 YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD---AGSFLCIAVAR 297 (403)
Q Consensus 221 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~---~~~~l~~a~~~ 297 (403)
..|.||||+|+..|+.+++++|++ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+ |.||||+|+..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 345566666666666666666666 66666666666666666666666666666666666665543 55777777777
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccc
Q 015680 298 GDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKC 377 (403)
Q Consensus 298 ~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 377 (403)
|+.+++++|+++|++++.+|..|+||||+|+..+ .+..+.||||+|+..|+.+++++|++++.
T Consensus 122 g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-----------------~~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 122 VRPEVVEALVELGADIEVEDERGLTALELAREIL-----------------KTTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-----------------TTCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-----------------hccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 7777778888888888888899999999998522 22567899999999999999999998755
Q ss_pred c
Q 015680 378 T 378 (403)
Q Consensus 378 ~ 378 (403)
+
T Consensus 185 ~ 185 (244)
T 3ui2_A 185 E 185 (244)
T ss_dssp E
T ss_pred c
Confidence 4
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=3.5e-24 Score=189.52 Aligned_cols=141 Identities=23% Similarity=0.268 Sum_probs=129.5
Q ss_pred hhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHH
Q 015680 187 EAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKD-KFGNTPLLEAIK 265 (403)
Q Consensus 187 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~A~~ 265 (403)
+.++.||||+|+..|+.+++++|++ |++++.++..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4578999999999999999999999 99999999999999999999999999999999999999998 789999999999
Q ss_pred cCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcC
Q 015680 266 CGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAG 343 (403)
Q Consensus 266 ~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g 343 (403)
.|+.+++++|+++|++++..+ |.||||+|+..++ ...+.||||+|+..|+.+++++|++++
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 999999999999999998765 7799999986433 245899999999999999999999865
Q ss_pred CC
Q 015680 344 AS 345 (403)
Q Consensus 344 ~d 345 (403)
.+
T Consensus 184 ~~ 185 (244)
T 3ui2_A 184 FE 185 (244)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=2.8e-24 Score=195.82 Aligned_cols=138 Identities=18% Similarity=0.089 Sum_probs=105.0
Q ss_pred CCcHHHHHHHcCcHHHHHHHHhcCCCCCc------CCCCCCcHHHHHHHc---CChHHHHHHHHcCCCccccC--CCchH
Q 015680 223 GRSPLHLATSRGYEDITLFLIQKGVDINI------KDKFGNTPLLEAIKC---GHDGVTSLLVKEGASLNVDD--AGSFL 291 (403)
Q Consensus 223 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~------~~~~g~t~l~~A~~~---~~~~~v~~L~~~~~~~~~~~--~~~~l 291 (403)
..++|+.|+..|+.+.++.|++.|++++. .+..|+||||+|+.. |+.+++++|+++|++++..+ |.|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 44678888888888888888888888876 577788888888876 77888888888888777654 66888
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCH
Q 015680 292 CIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 366 (403)
Q Consensus 292 ~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~ 366 (403)
|+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+|+.+|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 888888888888888888888888888888888888888888888888887765 577888888887764
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=8.2e-24 Score=178.66 Aligned_cols=138 Identities=24% Similarity=0.290 Sum_probs=127.7
Q ss_pred hhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHH
Q 015680 187 EAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKD-KFGNTPLLEAIK 265 (403)
Q Consensus 187 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~A~~ 265 (403)
+.++.||||+|+..|+.+++++|++ +++++..+..|+||||+|+..|+.+++++|+++|++++.++ ..|+||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 5678999999999999999999999 99999999999999999999999999999999999999998 889999999999
Q ss_pred cCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHc
Q 015680 266 CGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEA 342 (403)
Q Consensus 266 ~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~ 342 (403)
.|+.+++++|+++|++++..+ |.||+|+|+..++. ..+.+||++|+..|+.+++++|.++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999999999998765 77999999986542 3468999999999999999999764
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=3.5e-24 Score=168.63 Aligned_cols=115 Identities=31% Similarity=0.311 Sum_probs=77.2
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCH
Q 015680 221 YDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDS 300 (403)
Q Consensus 221 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~ 300 (403)
..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..| +.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~-------------------------------~~ 53 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCG-------------------------------QL 53 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTT-------------------------------CH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcC-------------------------------CH
Confidence 34455666666666666666666655555555555555555555554 45
Q ss_pred HHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCH
Q 015680 301 DLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNK 366 (403)
Q Consensus 301 ~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~ 366 (403)
+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|...+..
T Consensus 54 ~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 119 (123)
T 3aaa_C 54 EILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIK 119 (123)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHH
Confidence 555555556667777777888888888888888888888888888888888888888888443333
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=1.8e-24 Score=188.52 Aligned_cols=130 Identities=22% Similarity=0.272 Sum_probs=75.2
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHc-CCCccccC--CCchHHHHHH
Q 015680 220 DYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKE-GASLNVDD--AGSFLCIAVA 296 (403)
Q Consensus 220 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~-~~~~~~~~--~~~~l~~a~~ 296 (403)
+..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++ |++++..+ |.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 55677888888888888888888888888888888888888888887777777777665 55444332 3344444444
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccC
Q 015680 297 RGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTK 349 (403)
Q Consensus 297 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~ 349 (403)
.|+.+++++|+++|++++.+|..|.||||+|+..++.++++.|+..|++....
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC------------
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhcc
Confidence 44444444444444444445555555555555555555555555554444333
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=7.9e-24 Score=192.86 Aligned_cols=138 Identities=23% Similarity=0.209 Sum_probs=122.4
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCCccc------cCCCCCcHHHHHHHc---CcHHHHHHHHhcCCCCCcCCCCCCcHH
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGADLNK------TDYDGRSPLHLATSR---GYEDITLFLIQKGVDINIKDKFGNTPL 260 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~~~~~g~t~l 260 (403)
..++|+.|+..|+.+.++.+++.|++++. .+..|.||||+|+.. |+.+++++|+++|++++.+|..|+|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 34679999999999999999999999987 588999999999997 899999999999999999999999999
Q ss_pred HHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcH
Q 015680 261 LEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLY 333 (403)
Q Consensus 261 ~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~ 333 (403)
|+|+..|+.+++++|+++|++++..| |.||||+|+..|+.+++++|++.|++ .|.||||+|+..|+.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999998876 77999999999999999999999876 589999999998863
No 100
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=4.2e-24 Score=180.54 Aligned_cols=136 Identities=16% Similarity=0.065 Sum_probs=118.2
Q ss_pred hhHhhhHHHhhccCCH----HHHHHHHHcCCCccccCCCCCcHHHHHHHcCc------HHHHHHHHhcCCCCCcCCCCCC
Q 015680 188 AELALRFNSAAYHGDL----YQLKGLIRAGADLNKTDYDGRSPLHLATSRGY------EDITLFLIQKGVDINIKDKFGN 257 (403)
Q Consensus 188 ~~~~~~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~------~~~~~~Ll~~~~~~~~~~~~g~ 257 (403)
..|.||||+|+.+|+. +++++|+++|++++.++..|+||||+|+..++ .+++++|+++|+++|.+|..|+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ 115 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYK 115 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGT
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcC
Confidence 6789999999999975 59999999999999999999999999999886 6889999999999999999999
Q ss_pred -cHHHHHHHcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCChHHHHHHHcCcHHH
Q 015680 258 -TPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLS-NGVDPNSRDYDHRTPLHVAASEGLYLM 335 (403)
Q Consensus 258 -t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~-~~~~~~~~~~~g~t~Lh~A~~~~~~~~ 335 (403)
||||+|+..+..+ .++.+++++|++ .|++++.+|..|.||||+|+..|+.++
T Consensus 116 ttpLh~A~~~~~~~--------------------------~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~ 169 (186)
T 3t8k_A 116 IVVFKNIFNYFVDE--------------------------NEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIA 169 (186)
T ss_dssp BCTTGGGGGCCSCH--------------------------HHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHH
T ss_pred chHHHHHHHcCCCh--------------------------hhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHH
Confidence 9999999855421 123467888888 899999999999999999999999999
Q ss_pred HHHHHHcCCCcccC
Q 015680 336 AKLLLEAGASVFTK 349 (403)
Q Consensus 336 ~~~Ll~~g~d~~~~ 349 (403)
+++|..+..+.+.+
T Consensus 170 v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 170 LKMMEDYIKKYNLK 183 (186)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhcc
Confidence 99998875544443
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=1.4e-23 Score=165.12 Aligned_cols=97 Identities=39% Similarity=0.527 Sum_probs=85.1
Q ss_pred hhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHc
Q 015680 187 EAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKC 266 (403)
Q Consensus 187 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~ 266 (403)
...+.++||+|+..|+.+++++|++.|++++..+..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CChHHHHHHHHcCCCcc
Q 015680 267 GHDGVTSLLVKEGASLN 283 (403)
Q Consensus 267 ~~~~~v~~L~~~~~~~~ 283 (403)
|+.+++++|+++|++++
T Consensus 84 ~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKT 100 (123)
T ss_dssp TCHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHcCCCCC
Confidence 87777766666554433
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=4.6e-22 Score=179.11 Aligned_cols=127 Identities=21% Similarity=0.183 Sum_probs=118.9
Q ss_pred CCcHHHHHHHcCChHHHHHHHHcCCCccc--------cCCCchHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCChHH
Q 015680 256 GNTPLLEAIKCGHDGVTSLLVKEGASLNV--------DDAGSFLCIAVAR---GDSDLLKRVLSNGVDPNSRDYDHRTPL 324 (403)
Q Consensus 256 g~t~l~~A~~~~~~~~v~~L~~~~~~~~~--------~~~~~~l~~a~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~L 324 (403)
..++|+.|+..|+.+.++.+++.|.+++. .+|.||||+|+.. |+.+++++|+++|++++.+|..|+|||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHH
Confidence 44789999999999999999999998653 3478999999999 899999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcccccccc
Q 015680 325 HVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLSE 382 (403)
Q Consensus 325 h~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 382 (403)
|+|+..|+.+++++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|++....
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 267 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNS 267 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCCS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999986554
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=6.6e-24 Score=184.97 Aligned_cols=130 Identities=21% Similarity=0.219 Sum_probs=114.3
Q ss_pred CCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCChHHHHHH
Q 015680 252 KDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSN-GVDPNSRDYDHRTPLHVAA 328 (403)
Q Consensus 252 ~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~Lh~A~ 328 (403)
.+..|.||||+|+..|+.+++++|++.|++++..+ |.||||+|+..|+.+++++|++. |++++.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 35678999999999999999999999999998655 77999999999999999999998 9999999999999999999
Q ss_pred HcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccccc
Q 015680 329 SEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQLS 381 (403)
Q Consensus 329 ~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~ 381 (403)
..|+.+++++|+++|++++.+|..|.||||+|+..++.++++.|+++++....
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 99999999999999999999999999999999999999999999999997653
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.4e-22 Score=151.07 Aligned_cols=93 Identities=40% Similarity=0.565 Sum_probs=87.0
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCC
Q 015680 286 DAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN 365 (403)
Q Consensus 286 ~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~ 365 (403)
+|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcccc
Q 015680 366 KNLIKLLEDAKCT 378 (403)
Q Consensus 366 ~~~v~~Ll~~~~~ 378 (403)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999975
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=5.7e-22 Score=193.42 Aligned_cols=126 Identities=19% Similarity=0.133 Sum_probs=94.5
Q ss_pred CcHHHHHHHcCcHHHHHHHHhcCCCCCcC------CCCCCcHHHHHHH---cCChHHHHHHHHcCCCccccC--CCchHH
Q 015680 224 RSPLHLATSRGYEDITLFLIQKGVDINIK------DKFGNTPLLEAIK---CGHDGVTSLLVKEGASLNVDD--AGSFLC 292 (403)
Q Consensus 224 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~------~~~g~t~l~~A~~---~~~~~~v~~L~~~~~~~~~~~--~~~~l~ 292 (403)
.+.||.|+..|+.++++.|++.|+++|.+ |..|.||||+|+. .|+.+++++|+++|++++..| |.||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 35677788888888888877777777766 6677788888755 777777777777777777655 567777
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccC
Q 015680 293 IAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTK 349 (403)
Q Consensus 293 ~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~ 349 (403)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 777788888888888888888888888888888888888888888888888877653
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=6e-22 Score=184.58 Aligned_cols=126 Identities=26% Similarity=0.237 Sum_probs=101.2
Q ss_pred CCCCcHHHHHHHc-CChHHHHHHHHcCCCccccC----CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHH
Q 015680 254 KFGNTPLLEAIKC-GHDGVTSLLVKEGASLNVDD----AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAA 328 (403)
Q Consensus 254 ~~g~t~l~~A~~~-~~~~~v~~L~~~~~~~~~~~----~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~ 328 (403)
..+.|+||.|+.. |+.++++.|+++|++++..+ +.||||+|+..|+.+++++|+++|++++..|..|+||||+|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHAT 276 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3456788888887 88888888888888777654 568888888888888888888888888888888888888888
Q ss_pred HcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHccccc
Q 015680 329 SEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDAKCTQ 379 (403)
Q Consensus 329 ~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~ 379 (403)
..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++++...
T Consensus 277 ~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~ 327 (368)
T 3jue_A 277 ILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMRE 327 (368)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred HcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc
Confidence 888888888888888888888888888888888888888888888877543
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=5.6e-22 Score=184.80 Aligned_cols=143 Identities=24% Similarity=0.211 Sum_probs=101.3
Q ss_pred CCCcHHHHHHHc-CcHHHHHHHHhcCCCCCcCC--CCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHH
Q 015680 222 DGRSPLHLATSR-GYEDITLFLIQKGVDINIKD--KFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVA 296 (403)
Q Consensus 222 ~g~t~L~~A~~~-~~~~~~~~Ll~~~~~~~~~~--~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~ 296 (403)
.+.|+||.|+.. |+++++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 445788888887 88888888888888888777 678888888888888888888888888777655 5688888888
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcC---CCcccCCCCCCCHHHHHHHcC
Q 015680 297 RGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAG---ASVFTKDRWGNTPLDEGRMCG 364 (403)
Q Consensus 297 ~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g---~d~~~~~~~g~t~l~~A~~~~ 364 (403)
.|+.+++++|+++|++++..|.+|.||||+|+..|+.+++++|+..+ ++....+..+.|+++++....
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 88888888888888899999999999999999999999999998765 334455566788888777654
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=1e-21 Score=191.69 Aligned_cols=132 Identities=24% Similarity=0.246 Sum_probs=115.1
Q ss_pred hhHHHhhccCCHHHHHHHHHcCCCcccc------CCCCCcHHHHHHH---cCcHHHHHHHHhcCCCCCcCCCCCCcHHHH
Q 015680 192 LRFNSAAYHGDLYQLKGLIRAGADLNKT------DYDGRSPLHLATS---RGYEDITLFLIQKGVDINIKDKFGNTPLLE 262 (403)
Q Consensus 192 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~------~~~g~t~L~~A~~---~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~ 262 (403)
..||.|+..|+.+.++.|++.|++++.. +..|.||||+|+. .|+.+++++|+++|+++|.+|..|+||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 5799999999999999999999999877 8899999999976 899999999999999999999999999999
Q ss_pred HHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHH
Q 015680 263 AIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAAS 329 (403)
Q Consensus 263 A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~ 329 (403)
|+..|+.+++++|+++|++++..| |.||||+|+..|+.+++++|++.|++++. ||+|.+..
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------------------
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 999999999999999999999876 67999999999999999999999999876 46666654
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=3e-21 Score=173.79 Aligned_cols=123 Identities=19% Similarity=0.132 Sum_probs=89.1
Q ss_pred CcHHHHHHHcCcHHHHHHHHhcCCCC------CcCCCCCCcHHHHHHHc---CChHHHHHHHHcCCCccccC--CCchHH
Q 015680 224 RSPLHLATSRGYEDITLFLIQKGVDI------NIKDKFGNTPLLEAIKC---GHDGVTSLLVKEGASLNVDD--AGSFLC 292 (403)
Q Consensus 224 ~t~L~~A~~~~~~~~~~~Ll~~~~~~------~~~~~~g~t~l~~A~~~---~~~~~v~~L~~~~~~~~~~~--~~~~l~ 292 (403)
.++|+.|+..|+.+.++.+++.|+++ +..|..|.||||+|+.. |+.+++++|+++|++++..+ |.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 35666666666666666666666663 33356666677766666 56666666666666666544 556777
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCc
Q 015680 293 IAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASV 346 (403)
Q Consensus 293 ~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~ 346 (403)
+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 777777777777778888888888888999999999999999999999888754
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=5.1e-21 Score=142.49 Aligned_cols=92 Identities=42% Similarity=0.600 Sum_probs=69.8
Q ss_pred HhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCCh
Q 015680 190 LALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 269 (403)
Q Consensus 190 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~ 269 (403)
|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 56777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHcCCC
Q 015680 270 GVTSLLVKEGAS 281 (403)
Q Consensus 270 ~~v~~L~~~~~~ 281 (403)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 777777777653
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=4.4e-21 Score=148.81 Aligned_cols=105 Identities=33% Similarity=0.448 Sum_probs=63.6
Q ss_pred CCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHc
Q 015680 253 DKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASE 330 (403)
Q Consensus 253 ~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~ 330 (403)
|..|+||||+|+..|+.+++++|+++|++++..+ |.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKN 85 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHC
Confidence 3334444444444444444444444443333322 33444444444555555556666667777788888888888888
Q ss_pred CcHHHHHHHHHcCCCcccCCCCCCCHH
Q 015680 331 GLYLMAKLLLEAGASVFTKDRWGNTPL 357 (403)
Q Consensus 331 ~~~~~~~~Ll~~g~d~~~~~~~g~t~l 357 (403)
|+.+++++|+++|++++.++..|.||-
T Consensus 86 ~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 86 GHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCHHHHHHHHHcCCCCCcCCccccccc
Confidence 888888888888888888888888774
No 112
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=99.84 E-value=1.1e-20 Score=155.89 Aligned_cols=158 Identities=22% Similarity=0.311 Sum_probs=135.4
Q ss_pred CCchhhHhhhccccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCe
Q 015680 2 RPGPAVARACGRKEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQ 81 (403)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ 81 (403)
|.+-.-|+...+....+.....+..++.+.....+.+++++.++|..++++++..+...+..+.|++|++|+++|++.+.
T Consensus 2 rr~~v~ae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~ 81 (161)
T 3idb_B 2 RRASVCAEAYNPDEEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDN 81 (161)
T ss_dssp CCCCEECCCCCTTC--------CCCCCCHHHHHHHHHHHTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCE
T ss_pred CceeEEeccCCccchhcccCCcccCCCCHHHHHHHHHHHhCCHhhhcCCHHHHHHHHHhcceeEeCCCCEEEeCCCCCcE
Confidence 45555666776666655555556777777777788899999999999999999999999999999999999999999999
Q ss_pred EEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHH
Q 015680 82 LYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLT 160 (403)
Q Consensus 82 ~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~ 160 (403)
+|+|++|.|+++. ..+|++.++..+.+|++||+.+++.+.++.++++|.++|+++.++++.|..++..+|...+.++.
T Consensus 82 ~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~ 159 (161)
T 3idb_B 82 FYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIVKNNAKKRKMYE 159 (161)
T ss_dssp EEEEEESEEEEEE-EETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHTSCCC--
T ss_pred EEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEEeHHHHHHHHHHCHHHHHHHHh
Confidence 9999999999998 88999999999999999999999999999999999999999999999999999999988766543
No 113
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=99.83 E-value=1.4e-20 Score=160.90 Aligned_cols=150 Identities=19% Similarity=0.342 Sum_probs=139.7
Q ss_pred ccccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEE
Q 015680 12 GRKEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLE 91 (403)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~ 91 (403)
...+|.++|+.||..++.++....+.++++++|+|..++++++..+...+..+.|++|++|+++|++.+.+|||.+|.|+
T Consensus 45 ~~~~e~~il~~l~~~Lr~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~ 124 (198)
T 2ptm_A 45 KMFDERHIFREVSESIRQDVANYNCRDLVASVPFFVGADSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVD 124 (198)
T ss_dssp CCCCSHHHHHHSCHHHHHHHHHHHTHHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCSEEEEEEECCEE
T ss_pred cCCCHHHHHHHcCHHHHHHHHHHHHHHHHhcCcchhcCCHHHHHHHHHhccceeeCCCCEEEECCCcCcEEEEEEeCEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 92 EVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
++. .+|+ ++..+.+|++||+.+++.+.++.++++|.++|+++.++++.|..++..+|.....++..+..+
T Consensus 125 ~~~--~~g~--~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~r 194 (198)
T 2ptm_A 125 IIM--SDGV--IATSLSDGSYFGEICLLTRERRVASVKCETYCTLFSLSVQHFNQVLDEFPAMRKTMEEIAVRR 194 (198)
T ss_dssp EEC--TTSC--EEEEECTTCEESCHHHHHSSCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHTC
T ss_pred EEe--cCCe--EEEEecCCCEechHHHcCCCccceEEEEeeEEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 986 4565 788999999999999999999999999999999999999999999999999988877766553
No 114
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=99.83 E-value=7.6e-20 Score=150.57 Aligned_cols=144 Identities=22% Similarity=0.282 Sum_probs=125.4
Q ss_pred ccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEE
Q 015680 14 KEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEV 93 (403)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~ 93 (403)
..++++|+.+|..++.++...++.+.+++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|+++
T Consensus 3 ~~~~~il~~lp~~l~~~i~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~ 82 (160)
T 4f8a_A 3 HMTEKVLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVI 82 (160)
T ss_dssp ------------CCHHHHHHHHTHHHHTTCGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEE
T ss_pred CchHHHHHHCCHHHHHHHHHHHHHHHHHhCHhhhhCCHHHHHHHHHhceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEE
Confidence 45667999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCeeEeeeecCCCcccccccccC--CCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHh
Q 015680 94 GVGEDGSEETVSQLQPNSSFGEVSILCN--IPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNL 162 (403)
Q Consensus 94 ~~~~~g~~~~~~~~~~G~~~g~~~ll~~--~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~l 162 (403)
. ++.++..+.+|++||+.+++.+ .++.++++|.++|+++.++++.|.+++..+|.....++..+
T Consensus 83 ~-----~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l 148 (160)
T 4f8a_A 83 Q-----DDEVVAILGKGDVFGDVFWKEATLAQSCANVRALTYCDLHVIKRDALQKVLEFYTAFSHSFSRNL 148 (160)
T ss_dssp E-----TTEEEEEEETTCEEECCTTTCSSCCBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHC
T ss_pred E-----CCEEEEEecCCCEeCcHHHhcCcccceEEEEEECCceEEEEEcHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 3468899999999999999888 68999999999999999999999999999999988887776
No 115
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.3e-20 Score=146.11 Aligned_cols=106 Identities=32% Similarity=0.478 Sum_probs=84.0
Q ss_pred ccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCChHHHHHHHHcCCCccccC--CCchHHHHH
Q 015680 218 KTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHDGVTSLLVKEGASLNVDD--AGSFLCIAV 295 (403)
Q Consensus 218 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~--~~~~l~~a~ 295 (403)
.+|..|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+ |.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 456778888888888888888888888888888888888888888888888888888888888777654 568888888
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCChH
Q 015680 296 ARGDSDLLKRVLSNGVDPNSRDYDHRTP 323 (403)
Q Consensus 296 ~~~~~~~v~~Ll~~~~~~~~~~~~g~t~ 323 (403)
..|+.+++++|+++|++++..+..|.||
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 8888888888888888888777777776
No 116
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=99.80 E-value=3.8e-19 Score=150.39 Aligned_cols=138 Identities=15% Similarity=0.181 Sum_probs=127.4
Q ss_pred hhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeee
Q 015680 27 PVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQ 106 (403)
Q Consensus 27 ~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~ 106 (403)
++.+.......+.+++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|+++..+.+|++.++..
T Consensus 28 ~~~~~~~~~~~~~L~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~ 107 (187)
T 3gyd_A 28 GGADKYFEEILEIVNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAK 107 (187)
T ss_dssp EEGGGGHHHHHHHHTTCCSSCCCCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEE
T ss_pred CccHHHHHHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEE
Confidence 33455666778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 107 LQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 107 ~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
+.+|++||+.+++.+.++.++++|.++|+++.++.+.|..++..+|.....++..+.+
T Consensus 108 ~~~G~~fGe~~~l~~~~~~~~v~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~ 165 (187)
T 3gyd_A 108 VGAGAIIGEMSMIDGMPRSASCVASLPTDFAVLSRDALYQLLANMPKLGNKVLIRLLQ 165 (187)
T ss_dssp EETTCEESHHHHHHCCCCSSEEEEEEEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ccCCCeeeeHHHhCCCCeeEEEEECCCeEEEEEcHHHHHHHHHHChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998877744433
No 117
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=99.80 E-value=7.8e-20 Score=156.68 Aligned_cols=148 Identities=24% Similarity=0.369 Sum_probs=136.4
Q ss_pred ccccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEE
Q 015680 12 GRKEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLE 91 (403)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~ 91 (403)
...+|.++|..||..++.++....+.++++++|+|..++++++..+...+..+.|++|++|+++|++++.+|||.+|.|+
T Consensus 46 ~~~~e~~il~~l~~~L~~~i~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~ 125 (202)
T 3bpz_A 46 KMFDEDSILGELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVS 125 (202)
T ss_dssp CCCCHHHHHHHSCHHHHHHHHHHHTHHHHHTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECEEE
T ss_pred cCCCHHHHHHHcCHHHHHHHHHHHHHHHHhcCCchhcCCHHHHHHHHHhCCceEECCCCEEEECCCcCCeEEEEeccEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 92 EVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 92 ~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
++. .+|++. .+.+|++||+.+++.+.++.++++|.++|+++.++++.|..++..+|.....+...+..
T Consensus 126 v~~--~~g~~~---~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~~~~ 193 (202)
T 3bpz_A 126 VLT--KGNKEM---KLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID 193 (202)
T ss_dssp EEC--TTSCCE---EEETTCEECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHHHSGGGHHHHHHHHHH
T ss_pred EEE--CCCeEE---EEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 974 566654 57999999999999999999999999999999999999999999999988877766654
No 118
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=99.80 E-value=1.9e-19 Score=145.02 Aligned_cols=129 Identities=18% Similarity=0.261 Sum_probs=114.6
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeE---eeeecCCCcc
Q 015680 37 MPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEET---VSQLQPNSSF 113 (403)
Q Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~---~~~~~~G~~~ 113 (403)
.+.+++.|+|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|++++.+.+|++.+ +..+.+|++|
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~f 84 (142)
T 3mdp_A 5 PERLRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIF 84 (142)
T ss_dssp TTGGGGSHHHHTSCHHHHHHHHHTEEEEEECTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEE
T ss_pred HHHHhhCchhccCCHHHHHHHHHhhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEe
Confidence 3578899999999999999999999999999999999999999999999999999999889999998 9999999999
Q ss_pred cccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 114 GEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 114 g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
|+.+++.+.++.++++|.++|+++.++.+.|..++..+|.....++..+.+.
T Consensus 85 G~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 136 (142)
T 3mdp_A 85 GVSSLIKPYHYTSSARATKPVRVVDINGARLREMSENNQALGQVLMNNVAAA 136 (142)
T ss_dssp CGGGSSTTCBCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chHHHcCCCCceEEEEECCcEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887777653
No 119
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=99.79 E-value=1.7e-19 Score=155.78 Aligned_cols=149 Identities=19% Similarity=0.312 Sum_probs=137.1
Q ss_pred ccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEE
Q 015680 14 KEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEV 93 (403)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~ 93 (403)
.++.++|+.||..++.++...++...+ ++|+|..++++++..+...+..+.|+||++|+++|++.+.+|||.+|.|+++
T Consensus 52 ~~~~~il~~Lp~~L~~~i~~~~~~~l~-~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~ 130 (212)
T 3ukn_A 52 IDVSELLKDFPDELRADIAMHLNKELL-QLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVL 130 (212)
T ss_dssp CCCCCTTTTSCHHHHHHHHTTCCCGGG-GSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEE
T ss_pred CCHHHHHHHcCHHHHHHHHHHHHHHHH-hcHHhhcCCHHHHHHHHHHhheEEeCCCCEEEECCCcccEEEEEEecEEEEE
Confidence 457889999999999999988887766 7999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCeeEeeeecCCCcccccccccCC--CcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhcccc
Q 015680 94 GVGEDGSEETVSQLQPNSSFGEVSILCNI--PQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEGKES 168 (403)
Q Consensus 94 ~~~~~g~~~~~~~~~~G~~~g~~~ll~~~--~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~~~~ 168 (403)
. +| .++..+.+|++||+.+++.+. ++.++++|.++|+++.++++.|.+++..+|.....++..+...-..
T Consensus 131 ~---~~--~~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~~l~~ 202 (212)
T 3ukn_A 131 K---DN--TVLAILGKGDLIGSDSLTKEQVIKTNANVKALTYCDLQYISLKGLREVLRLYPEYAQKFVSEIQHDLTY 202 (212)
T ss_dssp S---SS--CEEEEECTTCEEECSCCSSSSCCBBCSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHEEE
T ss_pred E---CC--eEEEEecCCCCcCcHHhccCCCCCcceEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHhhcc
Confidence 6 33 678999999999999999988 8999999999999999999999999999999999988888765443
No 120
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=99.79 E-value=8.7e-19 Score=142.27 Aligned_cols=129 Identities=19% Similarity=0.271 Sum_probs=121.7
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccc
Q 015680 37 MPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 116 (403)
Q Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~ 116 (403)
.+.+++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|++++.+.+|++.++..+.+|++||+.
T Consensus 4 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 83 (149)
T 2pqq_A 4 DDVLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGEL 83 (149)
T ss_dssp GGGGTSSTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGG
T ss_pred HHHhhhChhhhcCCHHHHHHHHHhceEEEeCCCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechH
Confidence 45789999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred ccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 117 SILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 117 ~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+++.+.++..+++|.++|+++.++.+.|..++..+|.....++..+..+
T Consensus 84 ~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~~ 132 (149)
T 2pqq_A 84 SLFDPGPRTATGTALTEVKLLALGHGDLQPWLNVRPEVATALLRAVARR 132 (149)
T ss_dssp GGTSCEECSSEEEESSCEEEEEEEGGGHHHHHHHCTHHHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEEccceEEEEEeHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999889999999999999999999999999999999888877776653
No 121
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=99.78 E-value=1.2e-18 Score=142.23 Aligned_cols=131 Identities=15% Similarity=0.239 Sum_probs=118.7
Q ss_pred HhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccc
Q 015680 35 LYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 114 (403)
Q Consensus 35 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g 114 (403)
...+.+++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|++++.+.+|++.++..+.+|++||
T Consensus 9 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G 88 (154)
T 2z69_A 9 VHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFA 88 (154)
T ss_dssp HHHHHHTTSTTTTTSCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEES
T ss_pred hHHHHhhcChhhcCCCHHHHHHHHhhCcEEEecCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeec
Confidence 34568899999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred ccccccCCC-cceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 115 EVSILCNIP-QPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 115 ~~~ll~~~~-~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+.+++.+.+ +..+++|.++|+++.++.+.|..++..+|.....++..+..+
T Consensus 89 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~l~~~~~~r 140 (154)
T 2z69_A 89 EAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTR 140 (154)
T ss_dssp GGGGGSSCSBCSSEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHhhccCCCCCceEEEEccceEEEEECHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 999999988 999999999999999999999999999999988888877664
No 122
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=9.9e-19 Score=134.35 Aligned_cols=87 Identities=39% Similarity=0.601 Sum_probs=80.1
Q ss_pred CCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCC
Q 015680 286 DAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGN 365 (403)
Q Consensus 286 ~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~ 365 (403)
++.|+||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 102 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGN 102 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCC
Confidence 45688888888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 015680 366 KNLIKLL 372 (403)
Q Consensus 366 ~~~v~~L 372 (403)
.+++++|
T Consensus 103 ~~~~~~L 109 (110)
T 2zgd_A 103 EDLAEIL 109 (110)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999987
No 123
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=99.77 E-value=1.7e-18 Score=138.92 Aligned_cols=131 Identities=24% Similarity=0.298 Sum_probs=117.0
Q ss_pred eeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCe
Q 015680 22 WIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSE 101 (403)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~ 101 (403)
.+|..++++.....+.+++++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|++++ +|
T Consensus 7 ~~p~~~k~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~---~g-- 81 (139)
T 3ocp_A 7 TLPFYPKSPQSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTK---EG-- 81 (139)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHCTTTTTSCHHHHHHHHHHCEEEEECSSCEEECTTSCCCEEEEEEECCEEEEE---TT--
T ss_pred cCCCCCCCHHHHHHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEEE---CC--
Confidence 5778888888888889999999999999999999999999999999999999999999999999999999976 44
Q ss_pred eEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchH
Q 015680 102 ETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRK 157 (403)
Q Consensus 102 ~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ 157 (403)
.++..+.+|++||+.+++.+.++.++++|.++|+++.++++.|.+++..++...+.
T Consensus 82 ~~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~r~ 137 (139)
T 3ocp_A 82 VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHT 137 (139)
T ss_dssp EEEEEECTTCEESCHHHHHCCCCSSEEEESSCEEEEEEEHHHHHHHHTC-------
T ss_pred EEEEEeCCCCEeccHHHHCCCCcceEEEECcceEEEEEcHHHHHHHHhhChHhhhh
Confidence 47899999999999999999999999999999999999999999999988876544
No 124
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=99.76 E-value=2.5e-18 Score=146.19 Aligned_cols=128 Identities=17% Similarity=0.161 Sum_probs=119.2
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccc
Q 015680 37 MPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 116 (403)
Q Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~ 116 (403)
..+++.+++|..|++++++.+......+.|++|++|+.+|++++.+|+|.+|.|++++.+.+|++.++.++.+|++||+.
T Consensus 6 ~~l~~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~ 85 (194)
T 3dn7_A 6 TALINHIRKFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDY 85 (194)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHhCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeeh
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred -ccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 117 -SILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 117 -~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
+++.+.++.++++|.++|+++.++.+.|.+++..+|.....+...+..
T Consensus 86 ~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~ 134 (194)
T 3dn7_A 86 MAFQKQQPADFYIQSVENCELLSITYTEQENLFERIPALERYFRLVYQK 134 (194)
T ss_dssp HHHHHTCBCSSEEEESSCEEEEEEEHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred HHHhcCCCCceEEEEECCEEEEEEeHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 678888999999999999999999999999999999988777666554
No 125
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=6.3e-18 Score=129.82 Aligned_cols=94 Identities=29% Similarity=0.498 Sum_probs=81.5
Q ss_pred ecCcchhhHhhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHH
Q 015680 182 HIGKHEAELALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFLIQKGVDINIKDKFGNTPLL 261 (403)
Q Consensus 182 ~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 261 (403)
.....+.++.++||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 33455677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCChHHHHHH
Q 015680 262 EAIKCGHDGVTSLL 275 (403)
Q Consensus 262 ~A~~~~~~~~v~~L 275 (403)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999998876
No 126
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=99.75 E-value=5.2e-18 Score=148.47 Aligned_cols=129 Identities=20% Similarity=0.279 Sum_probs=120.9
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccc
Q 015680 37 MPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 116 (403)
Q Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~ 116 (403)
.+++++.|+|..++++++..+...+..+.|++|++|+.+|++.+.+|+|++|.|++++.+.+|++.++.++.+|++||+.
T Consensus 5 ~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~ 84 (231)
T 3e97_A 5 LDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGET 84 (231)
T ss_dssp HHHHHTSGGGTTCCHHHHHHHHHTEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTT
T ss_pred HHHHhcChhhccCCHHHHHHHHHhcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 117 SILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 117 ~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+++.+.++..+++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 85 ~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 133 (231)
T 3e97_A 85 AVLAHQERSASVRALTPVRTLMLHREHFELILRRHPRVLWNLAEMLARR 133 (231)
T ss_dssp TTTCCCCCCEEEEESSCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHhCCCCceEEEEECCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888887777664
No 127
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=99.75 E-value=5.7e-18 Score=146.56 Aligned_cols=126 Identities=21% Similarity=0.325 Sum_probs=117.6
Q ss_pred hhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccc
Q 015680 40 IEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSIL 119 (403)
Q Consensus 40 l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll 119 (403)
++++|+|..++++++..+...++.+.|++|++|+.+|++.+.+|+|.+|.|+++..+.+|++.++..+.+|++||+.+++
T Consensus 1 L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~ 80 (216)
T 4ev0_A 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLL 80 (216)
T ss_dssp ---CGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHH
T ss_pred CCCChhhcCCCHHHHHHHHHhheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 120 CNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 120 ~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
.+.++.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 81 ~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 126 (216)
T 4ev0_A 81 DEGERSASAVAVEDTELLALFREDYLALIRRLPLVAHNLAALLARR 126 (216)
T ss_dssp HCCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEEcCCEEEEEEcHHHHHHHHHHCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888877777664
No 128
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=99.74 E-value=1e-17 Score=145.40 Aligned_cols=128 Identities=15% Similarity=0.111 Sum_probs=119.8
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCc--ccc
Q 015680 38 PYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS--FGE 115 (403)
Q Consensus 38 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~--~g~ 115 (403)
++++++|+|..+++++++.+...+..+.|++|++|+.+|++.+.+|+|++|.|++++.+.+|++.++..+.+|++ ||+
T Consensus 3 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~ 82 (220)
T 3dv8_A 3 SFENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSA 82 (220)
T ss_dssp --CCSCGGGGTSCHHHHHHHHTTCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGG
T ss_pred chHHhChhhhcCCHHHHHHHHhhCceEEeCCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred cccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 116 VSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 116 ~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
.+++.+.++..+++|.++|+++.++.+.|.+++..+|.....++..+...
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 132 (220)
T 3dv8_A 83 SCIMRSIQFEVTIEAEKDTDLWIIPAEIYKGIMKDSAPVANYTNELMATR 132 (220)
T ss_dssp GGGCTTCCCCCEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCceEEEEeeeeEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888877666653
No 129
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=99.74 E-value=4.4e-18 Score=149.55 Aligned_cols=132 Identities=17% Similarity=0.210 Sum_probs=124.5
Q ss_pred HHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 34 TLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 34 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++++.++|..++++++..+...+..+.|++|++|+.+|++.+.+|+|++|.|+++..+.+|++.++.++.+|++|
T Consensus 7 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 7 EAQKAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp HHHHHHHTTSHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred HHHHHHHhCCHhhccCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 114 GEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 114 g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
|+.+++.+.++.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 87 G~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 138 (237)
T 3fx3_A 87 GEAVALRNTPYPVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGH 138 (237)
T ss_dssp CHHHHHHTCCCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCCCceEEECCceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888887777664
No 130
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=99.74 E-value=1.3e-17 Score=136.21 Aligned_cols=128 Identities=24% Similarity=0.339 Sum_probs=114.7
Q ss_pred cChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEe
Q 015680 25 LYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETV 104 (403)
Q Consensus 25 ~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~ 104 (403)
..++.........+++++.++|..++++++..+...+..+.|++|++|+.+|++.+.+|+|++|.|+++. +| ..+
T Consensus 25 ~~~k~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~~--~~~ 99 (154)
T 3pna_A 25 VIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NN--EWA 99 (154)
T ss_dssp CCCCCHHHHHHHHHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEEE---TT--EEE
T ss_pred cCCCCHHHHHHHHHHHHhChhhhhCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEEE---CC--EEE
Confidence 4455555566778899999999999999999999999999999999999999999999999999999997 33 367
Q ss_pred eeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchH
Q 015680 105 SQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRK 157 (403)
Q Consensus 105 ~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ 157 (403)
..+.+|++||+.+++.+.++.++++|.++|+++.++.+.|..++..++.....
T Consensus 100 ~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~~~~~~ll~~~~~~~~~ 152 (154)
T 3pna_A 100 TSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRK 152 (154)
T ss_dssp EEECTTCEECCHHHHHCCCCSSEEEESSCEEEEEEEHHHHHHHTHHHHHHC--
T ss_pred EEecCCCEeeehHhhcCCCcceEEEECcceEEEEEeHHHHHHHHHhChHHHhh
Confidence 88999999999999999999999999999999999999999999988776544
No 131
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=99.73 E-value=1.5e-17 Score=145.64 Aligned_cols=131 Identities=18% Similarity=0.138 Sum_probs=122.5
Q ss_pred HhHHhhhccCCCCCCCHHHHHHHHHH--hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCc
Q 015680 35 LYMPYIEKVSLFKGCSSEFINQIVIR--LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 112 (403)
Q Consensus 35 ~~~~~l~~~~~f~~l~~~~~~~l~~~--~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~ 112 (403)
.....+++.++|..++++++..+... ...+.|++|++|+++|++.+.+|+|++|.|++++.+.+|++.++..+.+|++
T Consensus 15 ~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~ 94 (232)
T 1zyb_A 15 TMFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYL 94 (232)
T ss_dssp HHHTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEE
T ss_pred HHHHHHhcCccccCCCHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCe
Confidence 34568899999999999999999998 9999999999999999999999999999999999899999999999999999
Q ss_pred ccccccccCCC-cceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 113 FGEVSILCNIP-QPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 113 ~g~~~ll~~~~-~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
||+.+++.+.+ +.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 95 fG~~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 148 (232)
T 1zyb_A 95 IEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLFRYDIFRLNYMNIVSNR 148 (232)
T ss_dssp ECGGGGSSSCCBCSSEEEESSCEEEEEEEHHHHHHTGGGSHHHHHHHHHHHHHH
T ss_pred eeehHHhCCCCCCceEEEEccceEEEEEEHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999999887 899999999999999999999999999998888877776664
No 132
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.73 E-value=8.2e-18 Score=159.78 Aligned_cols=150 Identities=23% Similarity=0.313 Sum_probs=128.4
Q ss_pred hHhhhccccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEe
Q 015680 7 VARACGRKEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVC 86 (403)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~ 86 (403)
-|+..+|....+.-...+..+|++-......+.+++.++|..|+++++..+...+..+.|++|++|+++|+.++.+|+|+
T Consensus 114 ~ae~~~~~~~~~~~~~~~~~~ks~~~~~~i~~~L~~~~lF~~L~~~~l~~l~~~~~~~~~~~Ge~I~~qGd~~d~~YiI~ 193 (416)
T 3tnp_B 114 CAEAYNPDEEEDDAESRIIHPKTDDQRNRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVID 193 (416)
T ss_dssp ECCCCCCC--------CCCCCCCHHHHHHHHHHHTTSHHHHTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEE
T ss_pred eccccCCcccccccccccCCCCCHHHHHHHHHHHhCCHhHhcCCHHHHHHHHHhcEEEEeCCCCEEEeCCCCCceEEEEE
Confidence 34444554443333344566777777778889999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchH
Q 015680 87 HGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRK 157 (403)
Q Consensus 87 ~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ 157 (403)
+|.|++++ ..+|++.++..+.+|++||+.+++.+.++.++++|.++|++|.++++.|..++...+.....
T Consensus 194 sG~v~v~~-~~~G~~~~v~~l~~G~~fGe~all~~~pr~atv~A~~d~~l~~i~r~~f~~ll~~~~~~~~~ 263 (416)
T 3tnp_B 194 RGTFDIYV-KCDGVGRCVGNYDNRGSFGELALMYNTPKAATITATSPGALWGLDRVTFRRIIVKNNAKKRK 263 (416)
T ss_dssp ECEEEEEE-ECSSCEEEEEEEESCCEECGGGGTSCCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHHSS
T ss_pred eeEEEEEE-ecCCCEEEEEEecCCCEEeeHHHhcCCCcccEEEEccCeEEEEEeehhhhhhhhcchhHHHH
Confidence 99999998 77899999999999999999999999999999999999999999999999999988776544
No 133
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=99.73 E-value=4.3e-18 Score=148.53 Aligned_cols=129 Identities=20% Similarity=0.314 Sum_probs=121.6
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccc
Q 015680 37 MPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 116 (403)
Q Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~ 116 (403)
.+++++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|++++.+.+|++.++..+.+|++||+.
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~ 84 (227)
T 3d0s_A 5 DEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGEL 84 (227)
T ss_dssp HHHHTTSSTTSSCCSSTTHHHHTTSCEEEECTTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCH
T ss_pred HHHHhcChhhcCCCHHHHHHHHhhCeEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 117 SILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 117 ~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+++.+.++.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 85 ~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 133 (227)
T 3d0s_A 85 SIFDPGPRTSSATTITEVRAVSMDRDALRSWIADRPEISEQLLRVLARR 133 (227)
T ss_dssp HHHSCSCCSSEEEESSCEEEEEEEHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred HHcCCCCceeEEEEcccEEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988888777766653
No 134
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=99.72 E-value=3.1e-17 Score=143.29 Aligned_cols=129 Identities=12% Similarity=0.159 Sum_probs=110.0
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccc
Q 015680 37 MPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 116 (403)
Q Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~ 116 (403)
...++..++|..|++++++.+...+..+.|++|++|+.+|++.+.+|+|++|.|++++.+.+|++.++.++.+|++||+.
T Consensus 10 ~~~lr~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~ 89 (230)
T 3iwz_A 10 TTTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEM 89 (230)
T ss_dssp ------------CCHHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCG
T ss_pred hhhhhhcchhccCCHHHHHHHHHhCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEeh
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC-CcceeEEEeccceeeeechHhHHHHHHHH-----hhcchHHHHHhhhc
Q 015680 117 SILCNI-PQPYTVRICELSRLLRIDKQSFTSILEIY-----FCDGRKVLTNLLEG 165 (403)
Q Consensus 117 ~ll~~~-~~~~~~~a~~~~~~~~i~~~~~~~l~~~~-----~~~~~~ll~~ll~~ 165 (403)
+++.+. ++.++++|.++|+++.++.+.|.+++..+ |.....++..+...
T Consensus 90 ~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~~~~~~p~~~~~~~~~l~~~ 144 (230)
T 3iwz_A 90 GLFIESDTREVILRTRTQCELAEISYERLQQLFQTSLSPDAPRILYAIGVQLSKR 144 (230)
T ss_dssp GGTSCCSBCCSEEEESSCEEEEEEEHHHHHHHHHTTTGGGHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCceeEEEEcCcEEEEEEeHHHHHHHHHHhcccCCcHHHHHHHHHHHHH
Confidence 998875 78899999999999999999999999999 88877777766653
No 135
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=99.72 E-value=6.3e-18 Score=147.47 Aligned_cols=130 Identities=15% Similarity=0.237 Sum_probs=122.4
Q ss_pred hHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccc
Q 015680 36 YMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 115 (403)
Q Consensus 36 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~ 115 (403)
..+++++.++|..++++++..+...+..+.|++|++|+.+|++++.+|+|++|.|+++..+.+|++.++..+.+|++||+
T Consensus 7 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 7 HQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAE 86 (227)
T ss_dssp SHHHHTTSTTTSSSCHHHHHHHHTSCEEEECCTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESC
T ss_pred HHHHHhcChhhcCCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeee
Confidence 35688999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred cccccCCC-cceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 116 VSILCNIP-QPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 116 ~~ll~~~~-~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
.+++.+.+ +.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 87 ~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 137 (227)
T 3dkw_A 87 AMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQDNTPLALALLAKLSTR 137 (227)
T ss_dssp TTTTTTCSBCSSCEEESSCCEEEEEESHHHHHHHSSCTHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999998 999999999999999999999999999998888777776664
No 136
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=99.71 E-value=1.6e-17 Score=132.90 Aligned_cols=118 Identities=17% Similarity=0.300 Sum_probs=107.6
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEee--eecCCCcccc
Q 015680 38 PYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVS--QLQPNSSFGE 115 (403)
Q Consensus 38 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~--~~~~G~~~g~ 115 (403)
+++++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|+++ ...+|++.++. .+.+|++||+
T Consensus 6 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~fGe 84 (137)
T 1wgp_A 6 SGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFCGD 84 (137)
T ss_dssp CSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBSST
T ss_pred HHHHcCcchhhCCHHHHHHHHHHheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEecH
Confidence 46889999999999999999999999999999999999999999999999999965 57788988887 9999999999
Q ss_pred ccc---ccCCC------cceeEEEeccceeeeechHhHHHHHHHHhhcch
Q 015680 116 VSI---LCNIP------QPYTVRICELSRLLRIDKQSFTSILEIYFCDGR 156 (403)
Q Consensus 116 ~~l---l~~~~------~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~ 156 (403)
.++ +.+.+ +.++++|.++|+++.++.+.|.+++..+|....
T Consensus 85 ~~l~~~~~~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~ 134 (137)
T 1wgp_A 85 ELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRSGP 134 (137)
T ss_dssp HHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHHHHCCCTT
T ss_pred HHHHHHhccccccccccceeEEEEeEEEEEEEECHHHHHHHHHHCHhhHh
Confidence 985 77664 578999999999999999999999999887654
No 137
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.71 E-value=1.6e-16 Score=144.56 Aligned_cols=146 Identities=22% Similarity=0.253 Sum_probs=126.5
Q ss_pred ccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEE
Q 015680 14 KEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEV 93 (403)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~ 93 (403)
++-......+|..+|++.......+.+++.++|..|+++++..+...+..+.|++|++|+++|++++.+|+|++|.|+++
T Consensus 15 ~~~~~~~~~~p~~~rs~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~ 94 (299)
T 3shr_A 15 IEGRGSMQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT 94 (299)
T ss_dssp -------CCCCCCCCCHHHHHHHHHHHHTCTTTTTSCHHHHHHHHHHCEEEEECTTCEEECTTCBCCCEEEEEESCEEEE
T ss_pred cccccccCCCCCcCCCHHHHHHHHHHHhhCHHHHcCCHHHHHHHHHhcCeEEECCCCEEEcCCCcCceEEEEEEEEEEEE
Confidence 33444566789999999888899999999999999999999999999999999999999999999999999999999997
Q ss_pred eecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 94 GVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 94 ~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
+ +| ..+..+.+|++||+.+++.+.++.++++|.++|+++.++++.|..++...+.........++.
T Consensus 95 ~---~g--~~~~~~~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~~~~i~~~~~~~~~~~~~~~l~ 160 (299)
T 3shr_A 95 K---EG--VKLCTMGPGKVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMMRTGLIKHTEYMEFLK 160 (299)
T ss_dssp E---TT--EEEEEECTTCEESCSGGGTTTBCCSEEEESSCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred E---CC--EEEEEeCCCCeeeHhHHhcCCCCCcEEEEcCCeEEEEEcHHHHHHHhhHhHHHHHHHHHHHHh
Confidence 6 33 578899999999999999999999999999999999999999999999987665554444443
No 138
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=99.70 E-value=4.4e-17 Score=130.40 Aligned_cols=124 Identities=22% Similarity=0.309 Sum_probs=114.3
Q ss_pred hHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccc
Q 015680 36 YMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 115 (403)
Q Consensus 36 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~ 115 (403)
..+++++.++|..++++++..+...+..+.|++|++|+++|++.+.+|+|++|.|+++..+ ...+.+|++||+
T Consensus 9 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~-------~~~~~~G~~~G~ 81 (138)
T 1vp6_A 9 NWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN-------PVELGPGAFFGE 81 (138)
T ss_dssp HHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEECSSS-------CEEECTTCEECH
T ss_pred HHHHHHhChhhhcCCHHHHHHHHHhhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEEeCC-------cceECCCCEeee
Confidence 4578999999999999999999999999999999999999999999999999999998643 247899999999
Q ss_pred cccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhcc
Q 015680 116 VSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEGK 166 (403)
Q Consensus 116 ~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~~ 166 (403)
.+++.+.++..+++|.++|+++.++.+.|..++..+|.....++..+.++.
T Consensus 82 ~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~p~~~~~~~~~~~~r~ 132 (138)
T 1vp6_A 82 MALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALERR 132 (138)
T ss_dssp HHHHHCCCCSSCEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred hHhccCCCceeEEEECCCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999888888777653
No 139
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=99.70 E-value=3.3e-17 Score=143.40 Aligned_cols=124 Identities=15% Similarity=0.164 Sum_probs=113.2
Q ss_pred ccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccC
Q 015680 42 KVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCN 121 (403)
Q Consensus 42 ~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~ 121 (403)
..|+|..++++++..+......+.|++|++|+++|++.+.+|+|.+|.|++++.+.+|++.++..+.+|++||+.+++.+
T Consensus 14 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~ 93 (232)
T 2gau_A 14 LRDVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAE 93 (232)
T ss_dssp SHHHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHT
T ss_pred ccHhhhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCC
Confidence 57899999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 122 IPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 122 ~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
.++.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 94 ~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 137 (232)
T 2gau_A 94 ETCSSTAIAVENSKVLAIPVEAIEALLKGNTSFCRYFLKALAKE 137 (232)
T ss_dssp SCCSSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcceEEEEecceEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999988887777664
No 140
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=99.69 E-value=9.5e-17 Score=148.43 Aligned_cols=128 Identities=20% Similarity=0.328 Sum_probs=120.4
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccc
Q 015680 37 MPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV 116 (403)
Q Consensus 37 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~ 116 (403)
.+.++++|+|..|+++++..+...++.+.|++|++|+++|++++.+|+|++|.|++++.+.+|++ ++..+.+|++||+.
T Consensus 12 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~-~~~~~~~G~~fGe~ 90 (333)
T 4ava_A 12 VEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVA-IIARALPGMIVGEI 90 (333)
T ss_dssp HHHHTTSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCE-EEEEECTTCEESHH
T ss_pred HHHHhCCHhHhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcE-EEEEecCCCEeeHH
Confidence 47889999999999999999999999999999999999999999999999999999998888887 89999999999999
Q ss_pred ccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhcc
Q 015680 117 SILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEGK 166 (403)
Q Consensus 117 ~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~~ 166 (403)
+++.+.++.++++|.++|+++.++++.|..++ .+|.....++..+...-
T Consensus 91 ~l~~~~~~~~~v~A~~~~~~~~i~~~~~~~l~-~~p~~~~~~~~~~~~~~ 139 (333)
T 4ava_A 91 ALLRDSPRSATVTTIEPLTGWTGGRGAFATMV-HIPGVGERLLRTARQRL 139 (333)
T ss_dssp HHHHTCBCSSEEEESSCEEEEEECHHHHHHHH-HSTTHHHHHHHHHHHHH
T ss_pred HhcCCCCceEEEEEecCEEEEEEcHHHHHHHH-hChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 89998888877776643
No 141
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=99.69 E-value=1.4e-16 Score=137.01 Aligned_cols=122 Identities=16% Similarity=0.211 Sum_probs=111.1
Q ss_pred CCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCC-
Q 015680 44 SLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNI- 122 (403)
Q Consensus 44 ~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~- 122 (403)
++++.++++++..+...+..+.|++|++|+.+|++.+.+|+|++|.|++++.+.+|++.++.++.+|++||+.+++.+.
T Consensus 2 ~l~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~ 81 (210)
T 3ryp_A 2 VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQ 81 (210)
T ss_dssp -----CCCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTC
T ss_pred cCCCcCCHHHHHHHHHhcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCC
Confidence 4667899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 123 PQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 123 ~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
++.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 82 ~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 124 (210)
T 3ryp_A 82 ERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 124 (210)
T ss_dssp BCSSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred CceEEEEECCcEEEEEEcHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999888877776664
No 142
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=99.67 E-value=4.2e-16 Score=133.77 Aligned_cols=117 Identities=15% Similarity=0.217 Sum_probs=108.6
Q ss_pred CCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCC----Cc
Q 015680 49 CSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNI----PQ 124 (403)
Q Consensus 49 l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~----~~ 124 (403)
|++++++.+...+..+.|++|++|+.+|++.+.+|+|.+|.|++++.+.+|++.++.++.+|++||+.+++.+. ++
T Consensus 1 l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~ 80 (207)
T 2oz6_A 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQER 80 (207)
T ss_dssp CCHHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBC
T ss_pred CCHHHHHHHHhhcceEEECCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999888 89
Q ss_pred ceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 125 PYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 125 ~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 81 ~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 121 (207)
T 2oz6_A 81 SAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADR 121 (207)
T ss_dssp CSEEEESSCEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ceEEEECCcEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888777766654
No 143
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=99.66 E-value=7.2e-17 Score=128.53 Aligned_cols=116 Identities=19% Similarity=0.255 Sum_probs=104.0
Q ss_pred HHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeC-CCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCC
Q 015680 33 QTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFL-PGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNS 111 (403)
Q Consensus 33 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~-~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~ 111 (403)
.....+++++.++|..++++++..+...+..+.|+ +|++|+++|++.+.+|+|++|.|+++. .+|++ ..+.+|+
T Consensus 11 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~--~~g~~---~~l~~G~ 85 (134)
T 2d93_A 11 IEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEISH--PDGKV---ENLFMGN 85 (134)
T ss_dssp HHHHHHHHHHSSTTTSSCHHHHHHHTTTEEEEEECSSSCEEECTTCEECEEEECCBSCEEEEC--SSSCE---EEECTTC
T ss_pred HHHHHHHHhCCcchhhCCHHHHHHHHHhheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEEc--CCCcE---EEecCCC
Confidence 33556789999999999999999999999999999 999999999999999999999999985 56665 4578999
Q ss_pred cccccccccCCCcceeE-EEeccceeeeechHhHHHHHHHHhh
Q 015680 112 SFGEVSILCNIPQPYTV-RICELSRLLRIDKQSFTSILEIYFC 153 (403)
Q Consensus 112 ~~g~~~ll~~~~~~~~~-~a~~~~~~~~i~~~~~~~l~~~~~~ 153 (403)
+||+.+++.+.++.+++ +|.++|+++.++.+.|..++.....
T Consensus 86 ~fG~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~ 128 (134)
T 2d93_A 86 SFGITPTLDKQYMHGIVRTKVDDCQFVCIAQQDYWRILNHVEK 128 (134)
T ss_dssp EESCCSSSCCEECCSEEEESSSSEEEEEEEHHHHHHHSSCCSS
T ss_pred ccChhHhcCCCcceeEEEEEecceEEEEEeHHHHHHHHHHHHh
Confidence 99999999998888888 9999999999999999998765543
No 144
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.66 E-value=3.8e-16 Score=141.51 Aligned_cols=136 Identities=24% Similarity=0.347 Sum_probs=123.4
Q ss_pred ecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeE
Q 015680 24 RLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEET 103 (403)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~ 103 (403)
+..+|+.-......+++++.++|..|+++++..+...+..+.|++|++|+++|++++.+|+|++|.|+++. +| ..
T Consensus 25 ~~~~ks~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~---~g--~~ 99 (291)
T 2qcs_B 25 KVIPKDYKTMAALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVYV---NN--EW 99 (291)
T ss_dssp CCCCCCHHHHHHHHHHTTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEEE---TT--EE
T ss_pred CCCCCCHHHHHHHHHHHhcChhhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCceEEEEeeeEEEEEE---CC--eE
Confidence 46667666666778899999999999999999999999999999999999999999999999999999997 44 56
Q ss_pred eeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 104 VSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 104 ~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
+..+.+|++||+.+++.+.++.++++|.++|+++.++++.|..++..++.....++..++.
T Consensus 100 ~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 160 (291)
T 2qcs_B 100 ATSVGEGGSFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILMGSTLRKRKMYEEFLS 160 (291)
T ss_dssp EEEECTTCEECGGGGTCCCBCSSEEEESSCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCccchHHHhcCCCCceEEEECCCEEEEEEEhHHHHHHHhhhHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999998887776666555
No 145
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.65 E-value=7.8e-16 Score=149.10 Aligned_cols=142 Identities=23% Similarity=0.248 Sum_probs=129.4
Q ss_pred eecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCC--
Q 015680 23 IRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGS-- 100 (403)
Q Consensus 23 ~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~-- 100 (403)
.++.+|++.......+.+++.++|..|+++++..+...+..+.|++|++|+++|++.+.+|+|++|.|++++.+.+|+
T Consensus 27 ~~~~~rt~~~~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~ 106 (469)
T 1o7f_A 27 KRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQD 106 (469)
T ss_dssp SCSTTCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGG
T ss_pred CChhhCCHHHHHHHHHHHhCCHhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCc
Confidence 356677777777888999999999999999999999999999999999999999999999999999999999888885
Q ss_pred eeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 101 EETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 101 ~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+.++..+.+|++||+.+ +.+.++.++++|.++|+++.++++.|..++..++.....++..+...
T Consensus 107 ~~~~~~~~~G~~fGe~~-l~~~~~~~tv~A~~~~~l~~i~~~~~~~l~~~~p~~~~~l~~~~~~~ 170 (469)
T 1o7f_A 107 AVTICTLGIGTAFGESI-LDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQYMAGLLAPPYGV 170 (469)
T ss_dssp CEEEEEECTTCEECGGG-GGTCBCSSEEEESSSEEEEEEEHHHHHHHHHHHGGGTTTTSCTTTSC
T ss_pred ceEEEEccCCCCcchhh-hCCCCccceEEEccceeEEEEcHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 48899999999999999 99999999999999999999999999999999999877776555543
No 146
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.65 E-value=4.9e-16 Score=146.04 Aligned_cols=137 Identities=26% Similarity=0.348 Sum_probs=123.1
Q ss_pred ecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeE
Q 015680 24 RLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEET 103 (403)
Q Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~ 103 (403)
+..+|+.-......+++++.++|..|+++++..+...+..+.|++|++|+++|++++.+|+|++|.|++++ +| ..
T Consensus 116 ~~~~ks~~~~~~i~~~l~~~~lF~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~---~~--~~ 190 (381)
T 4din_B 116 KVIPKDYKTMTALAKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVYV---NG--EW 190 (381)
T ss_dssp CCCCCCHHHHHHHHHHHTTCTTSSSCCHHHHHHHHHHCEEEECCTTCBSSCTTSBCCEEEECSSSEEEEEE---TT--EE
T ss_pred CCCCCCHHHHHHHHHHHhCChhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEEE---CC--eE
Confidence 35666666666778899999999999999999999999999999999999999999999999999999997 33 36
Q ss_pred eeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 104 VSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 104 ~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+..+.+|++||+.+++.+.++.++++|.++|++|.++++.|..++...+.....++..++..
T Consensus 191 v~~l~~G~~fGe~all~~~~r~atv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~~~~~~L~~ 252 (381)
T 4din_B 191 VTNISEGGSFGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILMGSTLRKRKMYEEFLSK 252 (381)
T ss_dssp EEEEESSCCBCGGGGTSCCBCSSEEEESSSCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeCCCCCEEEchHHhcCCCcceEEEECCCEEEEEEchHHHHHhhhhhhHHHHHHHHHHhhh
Confidence 78899999999999999999999999999999999999999999999988877766655553
No 147
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.65 E-value=2.7e-16 Score=143.11 Aligned_cols=134 Identities=20% Similarity=0.275 Sum_probs=125.7
Q ss_pred HHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeec-CCCCeeEeeeecCCC
Q 015680 33 QTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVG-EDGSEETVSQLQPNS 111 (403)
Q Consensus 33 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~-~~g~~~~~~~~~~G~ 111 (403)
...+..++++.++|..++++++..+...+..+.|++|++|+++|++++.+|+|.+|.|++++.. .+|++.++..+.+|+
T Consensus 152 ~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~ 231 (299)
T 3shr_A 152 HTEYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGD 231 (299)
T ss_dssp HHHHHHHHTTSHHHHHSCHHHHHHHTTTCEEEEECTTCEEECTTCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTC
T ss_pred HHHHHHHHhhCHHhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCC
Confidence 3456778999999999999999999999999999999999999999999999999999999877 689999999999999
Q ss_pred cccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhcc
Q 015680 112 SFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEGK 166 (403)
Q Consensus 112 ~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~~ 166 (403)
+||+.+++.+.++.++++|.++|+++.++++.|..++..+|.....++..+.++.
T Consensus 232 ~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~f~~ll~~~p~~~~~~~~~l~~r~ 286 (299)
T 3shr_A 232 WFGEKALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIGGLDDVSNKAYEDAEAKA 286 (299)
T ss_dssp EECGGGGSSSEECSSEEEESSSEEEEEEEHHHHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred EeChHHHhCCCCcceEEEECCCEEEEEEeHHHHHHHHccHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999888887753
No 148
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=99.64 E-value=3e-16 Score=135.38 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=108.1
Q ss_pred ccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccC
Q 015680 42 KVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCN 121 (403)
Q Consensus 42 ~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~ 121 (403)
.-|+|+..+++++..+......+.|++|++|+.+|++.+.+|+|.+|.|++++.+.+|++.++.++.+|++||+.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~ 82 (213)
T 1o5l_A 3 SDKIHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSS 82 (213)
T ss_dssp ----------CCGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSS
T ss_pred ccccchhhccCCHHHHhcccEEEEECCCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcC
Confidence 35788899999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred C-CcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 122 I-PQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 122 ~-~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
. ++..+++|.++|+++.++.+.|..++..+|.....++..+..+
T Consensus 83 ~~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 127 (213)
T 1o5l_A 83 EPRFPVNVVAGENSKILSIPKEVFLDLLMKDRELLLFFLKDVSEH 127 (213)
T ss_dssp SCBCSSEEEESSSEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEccceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 6 8999999999999999999999999999999988887777664
No 149
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=99.64 E-value=9.1e-16 Score=136.62 Aligned_cols=121 Identities=16% Similarity=0.216 Sum_probs=109.1
Q ss_pred CCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCC-C
Q 015680 45 LFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNI-P 123 (403)
Q Consensus 45 ~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~-~ 123 (403)
+...++++++..+...+..+.|++|++|+.+|++++.+|+|++|.|++++.+.+|++.++.++.+|++||+.+++.+. +
T Consensus 53 ~~~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~ 132 (260)
T 3kcc_A 53 LGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQE 132 (260)
T ss_dssp ------CHHHHHHHTTSEEEEECTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCB
T ss_pred HcCCCCHHHHHHHHhhCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCC
Confidence 345689999999999999999999999999999999999999999999999999999999999999999999999888 8
Q ss_pred cceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 124 QPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 124 ~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+.++++|.++|+++.++.+.|.+++..+|.....++..+...
T Consensus 133 ~~~~~~A~~~~~l~~i~~~~~~~l~~~~p~l~~~l~~~l~~~ 174 (260)
T 3kcc_A 133 RSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARR 174 (260)
T ss_dssp CCSEEEESSCEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred CceEEEECCCeEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888777766654
No 150
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.61 E-value=6.7e-15 Score=133.25 Aligned_cols=132 Identities=20% Similarity=0.282 Sum_probs=119.6
Q ss_pred HHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCC-CeeEeeeecCCC
Q 015680 33 QTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDG-SEETVSQLQPNS 111 (403)
Q Consensus 33 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g-~~~~~~~~~~G~ 111 (403)
......++.+.++|..++.+++..+...+..+.|++|++|+++|++.+.+|+|.+|.|++++...+| ++..+..+.+|+
T Consensus 152 ~~~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~ 231 (291)
T 2qcs_B 152 RKMYEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSD 231 (291)
T ss_dssp HHHHHHHHHTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTC
T ss_pred HHHHHHHHhhchHhhhCCHHHHHHHHhhcEEEEECCCCEEEeCCccCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCC
Confidence 4455677889999999999999999999999999999999999999999999999999999876655 567899999999
Q ss_pred cccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 112 SFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 112 ~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
+||+.+++.+.++.++++|.++|+++.++++.|..++..+|......+..+..
T Consensus 232 ~fGe~~ll~~~~~~~tv~a~~~~~~~~i~~~~f~~~l~~~p~~~~~~~~~~~~ 284 (291)
T 2qcs_B 232 YFGEIALLMNRPKAATVVARGPLKCVKLDRPRFERVLGPCSDILKRNIQQYNS 284 (291)
T ss_dssp EECSGGGTCCCCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHHHTTSHHHHHH
T ss_pred EecHHHHcCCCCcceEEEECCcEEEEEEcHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998877776665544
No 151
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=99.61 E-value=4.2e-16 Score=135.22 Aligned_cols=120 Identities=13% Similarity=0.158 Sum_probs=112.0
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccc
Q 015680 38 PYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVS 117 (403)
Q Consensus 38 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ 117 (403)
.++++.|+|..++++++..+...+..+.|++|++|+.+|++.+.+|+|.+|.|+++ .+.+|++.++.++.+|++||+
T Consensus 4 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~~G~-- 80 (220)
T 2fmy_A 4 MRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVY-LAYEDKEFTLAILEAGDIFCT-- 80 (220)
T ss_dssp TCSCSSCHHHHTTSGGGTTTGGGSEEEEECTTCEEECTTCSSCEEEEEEESEEEEE-EECSSCEEEEEEEETTCEEES--
T ss_pred hhhhcChhhhcCCHHHHHHHHHhhheeEeCCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEeCC--
Confidence 46788999999999999999999999999999999999999999999999999995 788999999999999999998
Q ss_pred cccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 118 ILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 118 ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
++.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 81 -----~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~~~~~ 123 (220)
T 2fmy_A 81 -----HTRAFIQAMEDTTILYTDIRNFQNIVVEFPAFSLNMVKVLGDL 123 (220)
T ss_dssp -----CSSSEEEESSSEEEEEEEHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred -----ccceEEEEcCcEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999888877776654
No 152
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=99.61 E-value=1.3e-15 Score=134.87 Aligned_cols=124 Identities=16% Similarity=0.108 Sum_probs=113.6
Q ss_pred hhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccccc
Q 015680 39 YIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSI 118 (403)
Q Consensus 39 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~l 118 (403)
++.....+..++++++..+...+..+.|++|++|+.+|++++.+|+|.+|.|++++.+.+|++.++.++.+|++||+ +
T Consensus 10 ~~~~~~p~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~--~ 87 (250)
T 3e6c_C 10 FCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGK--L 87 (250)
T ss_dssp CCCCSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECC--C
T ss_pred hhhhccchhhCCHHHHHHHHhhCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEee--e
Confidence 34445556899999999999999999999999999999999999999999999999999999999999999999999 7
Q ss_pred ccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 119 LCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 119 l~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
+.+. +.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 88 l~~~-~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 133 (250)
T 3e6c_C 88 YPTG-NNIYATAMEPTRTCWFSEKSLRTVFRTDEDMIFEIFKNYLTK 133 (250)
T ss_dssp SCCS-CCEEEEESSSEEEEEECHHHHHHHHHHCTHHHHHHHHHHHHH
T ss_pred cCCC-CceEEEEcccEEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 7777 999999999999999999999999999999888877777664
No 153
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=99.60 E-value=4.6e-16 Score=135.17 Aligned_cols=119 Identities=12% Similarity=0.080 Sum_probs=110.6
Q ss_pred hhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccccc
Q 015680 39 YIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSI 118 (403)
Q Consensus 39 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~l 118 (403)
++++.++|..++++++..+...+..+.|++|++|+.+|++.+.+|+|.+|.|+++ .+.+|++.++..+.+|++||
T Consensus 1 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG---- 75 (222)
T 1ft9_A 1 MPPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC---- 75 (222)
T ss_dssp -CCCCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE----
T ss_pred CcccchhhhcCCHHHHHHHHhhCcEEEECCCCEEECCCCCCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec----
Confidence 3678999999999999999999999999999999999999999999999999997 78899999999999999999
Q ss_pred ccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 119 LCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 119 l~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
.++.++++|.++|+++.++.+.|..++..+|.....++..+...
T Consensus 76 ---~~~~~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 119 (222)
T 1ft9_A 76 ---MHSGCLVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRA 119 (222)
T ss_dssp ---SCSSCEEEESSCEEEEEECHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred ---CCCCEEEEEccceEEEEEeHHHHHHHHHHChHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999988887777664
No 154
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.59 E-value=1.6e-15 Score=133.74 Aligned_cols=123 Identities=27% Similarity=0.333 Sum_probs=109.7
Q ss_pred hHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccc
Q 015680 36 YMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 115 (403)
Q Consensus 36 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~ 115 (403)
..+.+++.++|..++++++..+...+..+.|++|++|+++|++++.+|+|++|.|+++. +|+ .+..+.+|++||+
T Consensus 5 i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~~---~~~--~~~~~~~g~~fGe 79 (246)
T 3of1_A 5 LEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFYV---NDN--KVNSSGPGSSFGE 79 (246)
T ss_dssp HHHHHHTCTTTTTSCHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEES---TTS--CCEEECTTCEECH
T ss_pred HHHHHhcCHhhHhCCHHHHHHHHHhhceEEECCCCEEEecCCCCCEEEEEEeeEEEEEE---CCE--EEEecCCCCeeeh
Confidence 45788999999999999999999999999999999999999999999999999999986 343 3689999999999
Q ss_pred cccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhh
Q 015680 116 VSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLL 163 (403)
Q Consensus 116 ~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll 163 (403)
.+++.+.++.++++|.++|+++.++++.|..++...+.........++
T Consensus 80 ~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l 127 (246)
T 3of1_A 80 LALMYNSPRAATVVATSDCLLWALDRLTFRKILLGSSFKKRLMYDDLL 127 (246)
T ss_dssp HHHHHTCCCSSEEEESSCEEEEEEEHHHHHHTTTTTTSHHHHHSHHHH
T ss_pred hHHhcCCCCCcEEEECCCeEEEEEEhHHHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887765554444333
No 155
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=99.57 E-value=1.6e-14 Score=126.81 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHH--HhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCc-
Q 015680 48 GCSSEFINQIVI--RLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQ- 124 (403)
Q Consensus 48 ~l~~~~~~~l~~--~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~- 124 (403)
+++++++..+.. ....++|++|++|+.+|++.+.+|+|++|.|++++.+.+|++.++.++ +|++||+.+++.+.+.
T Consensus 3 ~l~~~~l~~ll~~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~ 81 (238)
T 2bgc_A 3 NAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSV 81 (238)
T ss_dssp -CHHHHHHHHHHHTTCCCEEEETTCEEECTTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBS
T ss_pred CCCHHHHHHHHHhCCceEEEECCCCEEEeCCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcC
Confidence 578899999885 479999999999999999999999999999999999999999999999 9999999999988764
Q ss_pred -ceeEEEe-ccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 125 -PYTVRIC-ELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 125 -~~~~~a~-~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
..++.|. ++|+++.++.+.|..++..+|.....++..+...
T Consensus 82 ~~~~~~a~~~~~~v~~i~~~~~~~l~~~~p~~~~~~~~~l~~~ 124 (238)
T 2bgc_A 82 GYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQ 124 (238)
T ss_dssp CCCEEEECSSEEEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cceeEEEEEcceEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 6778888 5999999999999999999999888887777654
No 156
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.57 E-value=6e-15 Score=138.61 Aligned_cols=132 Identities=21% Similarity=0.288 Sum_probs=118.6
Q ss_pred HHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCC-eeEeeeecCC
Q 015680 32 SQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGS-EETVSQLQPN 110 (403)
Q Consensus 32 ~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~-~~~~~~~~~G 110 (403)
.+..+..++.+.++|..++++++..+...+..+.|++|++|+++|++++.+|+|.+|.|++++...+|+ +..+..+.+|
T Consensus 242 ~~~~~~~~L~~v~~f~~Ls~~el~~l~~~~~~~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~G 321 (381)
T 4din_B 242 KRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPS 321 (381)
T ss_dssp HHHHHHHHHHHCSTTTTCCTTHHHHHHTTCBCCCBCSSCBSSCTTSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTT
T ss_pred HHHHHHHHhhhhHHHHhccHHHHHHHHHhhhhccCCCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCC
Confidence 344566788999999999999999999999999999999999999999999999999999998766554 5679999999
Q ss_pred CcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhh
Q 015680 111 SSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLL 163 (403)
Q Consensus 111 ~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll 163 (403)
++||+.+++.+.++.++++|.++|+++.++++.|..++..++....+.+..+-
T Consensus 322 d~fGe~all~~~~r~~tv~A~~~~~ll~i~~~~f~~ll~~~~~i~~~~~~~~~ 374 (381)
T 4din_B 322 DYFGEIALLLNRPRAATVVARGPLKCVKLDRPRFERVLGPCSEILKRNIQRYN 374 (381)
T ss_dssp CEECTTGGGSCCBCSSEEEESSCBEEEEEEHHHHHHHHCCHHHHHHTTHHHHH
T ss_pred CEechHHHhCCCCceeEEEEcCCEEEEEEeHHHHHHHHhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988877666655443
No 157
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.56 E-value=8.2e-15 Score=139.10 Aligned_cols=129 Identities=19% Similarity=0.301 Sum_probs=110.0
Q ss_pred hHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCC------CCeeEeeeecC
Q 015680 36 YMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGED------GSEETVSQLQP 109 (403)
Q Consensus 36 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~------g~~~~~~~~~~ 109 (403)
+..++.++++|..++++++..+...+..+.|++|++|+++|++++.+|+|.+|.|++++...+ |++.++..+.+
T Consensus 265 ~~~~L~~v~lf~~Ls~~el~~L~~~l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~ 344 (416)
T 3tnp_B 265 YESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFR 344 (416)
T ss_dssp SSSSGGGCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEECC------------CEEEEECT
T ss_pred HHHHHhhchHhhcCCHHHHHHHHhhceEEEECCCCEEEeCCCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCC
Confidence 345678899999999999999999999999999999999999999999999999999987665 88999999999
Q ss_pred CCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 110 NSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 110 G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
|++||+.+++.+.++.++++|.++|+++.|+++.|..++..++......+..+.+
T Consensus 345 G~~fGE~all~~~~r~~tv~A~~~~~ll~I~~~~f~~ll~~~p~i~~~~~~~~~~ 399 (416)
T 3tnp_B 345 GQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLGPCMEIMKRNIATYEE 399 (416)
T ss_dssp TCEESGGGGTCCSCCSSEEEEEEEEEEEEEEHHHHHHHHCCHHHHHTCC------
T ss_pred CCEecHHHHhCCCCceeEEEEcCCeEEEEEEHHHHHHHhcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999888776665554443
No 158
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.54 E-value=1.5e-14 Score=127.42 Aligned_cols=119 Identities=19% Similarity=0.404 Sum_probs=108.5
Q ss_pred HHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCC
Q 015680 32 SQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNS 111 (403)
Q Consensus 32 ~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~ 111 (403)
.+..+..++++.++|..++++++..+...+..+.|++|++|+++|++++.+|+|.+|.|++++...+ .+..+.+|+
T Consensus 119 ~~~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~~~~~~----~~~~l~~g~ 194 (246)
T 3of1_A 119 KRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVSKKGQG----VINKLKDHD 194 (246)
T ss_dssp HHHHSHHHHHHCGGGTTCCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEECEEEEEETTTE----EEEEEETTC
T ss_pred HHHHHHHHHhhChhhhcCCHHHHHHHHHhhheEEeCCCCEEEeCCCcCCEEEEEEecEEEEEEcCCc----eEEEcCCCC
Confidence 3445667889999999999999999999999999999999999999999999999999999974322 789999999
Q ss_pred cccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhc
Q 015680 112 SFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCD 154 (403)
Q Consensus 112 ~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~ 154 (403)
+||+.+++.+.++.++++|.++|+++.++++.|..++...++.
T Consensus 195 ~fGe~~~~~~~~~~~~v~a~~~~~~~~i~~~~f~~ll~~~~~~ 237 (246)
T 3of1_A 195 YFGEVALLNDLPRQATVTATKRTKVATLGKSGFQRLLGPAVDV 237 (246)
T ss_dssp EECHHHHHHTCBCSSEEEESSCEEEEEEEHHHHHHHCTTHHHH
T ss_pred cccHHHHhCCCCcccEEEECCCEEEEEEeHHHHHHHhccHHHH
Confidence 9999999999999999999999999999999999998877654
No 159
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=99.54 E-value=2e-14 Score=126.55 Aligned_cols=115 Identities=23% Similarity=0.251 Sum_probs=104.5
Q ss_pred HHHHHHHHHHhh---eeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCc--c
Q 015680 51 SEFINQIVIRLH---EEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQ--P 125 (403)
Q Consensus 51 ~~~~~~l~~~~~---~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~--~ 125 (403)
++.++.+..... .+.|++|++|+.+|++.+.+|+|++|.|++++.+.+|++.++.++.+|++||+.+++.+.+. .
T Consensus 30 ~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~ 109 (243)
T 3la7_A 30 ANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRF 109 (243)
T ss_dssp HHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCC
T ss_pred HHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcce
Confidence 666777777777 99999999999999999999999999999999999999999999999999999999988764 4
Q ss_pred eeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 126 YTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 126 ~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
++++|.++|+++.++.+.|.+++..+|.....++..+...
T Consensus 110 ~~~~A~~~~~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~ 149 (243)
T 3la7_A 110 YHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSR 149 (243)
T ss_dssp EEEEESSSEEEEEEEHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred EEEEEccceEEEEEcHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999888877766653
No 160
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.48 E-value=3e-13 Score=130.90 Aligned_cols=121 Identities=19% Similarity=0.299 Sum_probs=106.8
Q ss_pred HhHHhhhccCCCCCCCHHHHHHHHHHhhe-eeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 35 LYMPYIEKVSLFKGCSSEFINQIVIRLHE-EFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 35 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~-~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+.+++.++|..++++++..+...+.. +.|++|++|+++|++++.+|||++|.|++++. |+ .++..+.+|++|
T Consensus 334 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~~~---~~-~~~~~l~~G~~f 409 (469)
T 1o7f_A 334 IIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVIY---GK-GVVCTLHEGDDF 409 (469)
T ss_dssp HHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEEET---TT-EEEEEEETTCEE
T ss_pred HHHHHHhcCHhhhhCCHHHHHHHHHHhheeeEecCCCEEEeCCCcCCeEEEEEEeEEEEEEc---CC-eeEEEecCCCEE
Confidence 45678999999999999999999999974 59999999999999999999999999999972 33 378999999999
Q ss_pred cccccccCCCcceeEEEec-cceeeeechHhHHHHHHHHhhcchHHH
Q 015680 114 GEVSILCNIPQPYTVRICE-LSRLLRIDKQSFTSILEIYFCDGRKVL 159 (403)
Q Consensus 114 g~~~ll~~~~~~~~~~a~~-~~~~~~i~~~~~~~l~~~~~~~~~~ll 159 (403)
|+.+++.+.++.++++|.+ +|+++.++++.|..++..++.....+.
T Consensus 410 Ge~~ll~~~~~~~tv~a~~~~~~~~~i~~~~f~~ll~~~p~~~~~l~ 456 (469)
T 1o7f_A 410 GKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLK 456 (469)
T ss_dssp CGGGGTCCSCCSSEEEESSSSEEEEEEEHHHHHHHHHHTTCC-----
T ss_pred EEehhhcCCCceEEEEEecCCEEEEEEcHHHHHHHHHHChHHHHHHH
Confidence 9999999999999999998 799999999999999999988766643
No 161
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=99.47 E-value=4.4e-14 Score=141.66 Aligned_cols=143 Identities=18% Similarity=0.247 Sum_probs=118.1
Q ss_pred ccccceeeeeeeecChhhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhh-eeeeCCCCeEEecCCccCeEEEEeeeEE
Q 015680 12 GRKEEVRYLLWIRLYPVRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLH-EEFFLPGEVIMEQGNVIDQLYFVCHGVL 90 (403)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~-~~~~~~ge~i~~~g~~~~~~~~v~~G~v 90 (403)
+|.+.-+-+-..++..+.........+.+++.++|..++++++..+...+. .+.|++|++|+++||+++.+|+|++|.|
T Consensus 6 ~p~~~~r~iL~k~p~~r~~~d~~~l~~~L~~~~lF~~Ls~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V 85 (694)
T 3cf6_E 6 FPDAHMRMILRKPPGQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSV 85 (694)
T ss_dssp -----CHHHHHSCGGGCCHHHHHHHHHHHTTCGGGTTSCHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEE
T ss_pred CcHHHHHHHHcCChhhCCHHHHHHHHHHHHcChhhccCCHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEE
Confidence 333333333333444454444445678899999999999999999999997 7899999999999999999999999999
Q ss_pred EEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEec-cceeeeechHhHHHHHHHHhhcchHH
Q 015680 91 EEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICE-LSRLLRIDKQSFTSILEIYFCDGRKV 158 (403)
Q Consensus 91 ~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~-~~~~~~i~~~~~~~l~~~~~~~~~~l 158 (403)
++++. |+ .++.++.+|++||+.+++.+.++.++++|.+ +|+++.++++.|..++..++.....+
T Consensus 86 ~v~~~---g~-~il~~l~~Gd~fGe~al~~~~~~~~tv~A~edd~~ll~I~~~~f~~ll~~~p~l~~~l 150 (694)
T 3cf6_E 86 NVVIY---GK-GVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRL 150 (694)
T ss_dssp EEEET---TT-EEEEEEETTCEECHHHHHHTCBCSSEEEECSSSEEEEEEEHHHHHHHTTTTCCCCEEE
T ss_pred EEEEe---CC-EEEEEeCCCCEeehHHHhCCCCceEEEEEeeCceEEEEEeHHHHHHHHHHCHHHHHHH
Confidence 99973 34 6899999999999999999999999999999 59999999999999999988876554
No 162
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.47 E-value=2.9e-13 Score=142.61 Aligned_cols=142 Identities=23% Similarity=0.303 Sum_probs=122.2
Q ss_pred ccceeeeeeeecCh--hhHHHHHHhHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEE
Q 015680 14 KEEVRYLLWIRLYP--VRKISQTLYMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLE 91 (403)
Q Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~ 91 (403)
.++++.+..|...| |++--.+..+..|+.+.+|+.+++.++..++..+....|++|++||++||.++.+|+|++|.|.
T Consensus 16 ~~~~~~i~~L~K~p~~Rt~edl~~I~~~Lk~~~~f~~l~~~~l~~l~~~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~ 95 (999)
T 4f7z_A 16 QSSAEWIACLDKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLD 95 (999)
T ss_dssp CCSCCHHHHHHSCSSSCCHHHHHHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEE
T ss_pred hhhHHHHHHhcCCcccCCHHHHHHHHHHHhCCHhhhcCCHHHHHHHHhheEEEEECCCCEEEcCCCcCCEEEEEEeeEEE
Confidence 44556666666554 3344445667789999999999999999999999999999999999999999999999999999
Q ss_pred EEeecC--CCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcch
Q 015680 92 EVGVGE--DGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGR 156 (403)
Q Consensus 92 ~~~~~~--~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~ 156 (403)
|+.... ++.+..+..+.+|+.||+ +++++.++.++++|.++|++|++++..|+.++..+++...
T Consensus 96 V~i~~~~~~~~~~~v~~l~~G~sFGE-all~n~pRtaTv~a~~~s~l~~l~r~~F~~i~~~~~e~~~ 161 (999)
T 4f7z_A 96 VKVSETSSHQDAVTICTLGIGTAFGE-SILDNTPRHATIVTRESSELLRIEQEDFKALWEKYRQYMA 161 (999)
T ss_dssp EEECSSSCTTSCEEEEEEETTCEECG-GGGGTCCCSSEEEESSSEEEEEEEHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCCCceeEEEecCCcchhh-hhccCCCcceEEEeccceEEEEEEHHHHHHHHHhChHHHH
Confidence 997543 456778899999999999 8899999999999999999999999999999988876543
No 163
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=99.43 E-value=3.2e-13 Score=114.62 Aligned_cols=94 Identities=22% Similarity=0.277 Sum_probs=84.7
Q ss_pred eeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHh
Q 015680 64 EFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQS 143 (403)
Q Consensus 64 ~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~ 143 (403)
++|++|++|+++|++.+.+|+|++|.|++++.+.+|++.++..+.+|++||+ +++.+.++.++++|.++|+++.++.+.
T Consensus 2 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge-~~~~~~~~~~~~~A~~~~~v~~i~~~~ 80 (195)
T 3b02_A 2 KRFARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE-EALEGKAYRYTAEAMTEAVVQGLEPRA 80 (195)
T ss_dssp EEECTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG-GGGTCSBCSSEEEESSSEEEEEECGGG
T ss_pred eEcCCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech-hhhCCCCceeEEEECCcEEEEEEcHHH
Confidence 6899999999999999999999999999999899999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhhcchHHHHHhhh
Q 015680 144 FTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 144 ~~~l~~~~~~~~~~ll~~ll~ 164 (403)
|. |.....++..+..
T Consensus 81 ~~------p~~~~~~~~~l~~ 95 (195)
T 3b02_A 81 MD------HEALHRVARNLAR 95 (195)
T ss_dssp CC------HHHHHHHHHHHHH
T ss_pred cC------HHHHHHHHHHHHH
Confidence 97 4554555444443
No 164
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.38 E-value=3.5e-14 Score=132.17 Aligned_cols=123 Identities=22% Similarity=0.304 Sum_probs=1.5
Q ss_pred hHHhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccc
Q 015680 36 YMPYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 115 (403)
Q Consensus 36 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~ 115 (403)
..+.+++.++|+.+++++++.+....+.+.|+|||+|+++||+.+.+|+|.+|.++++..+ ...+.+|++||+
T Consensus 226 ~~~~l~~~~lf~~ls~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~-------~~~l~~G~~fGe 298 (355)
T 3beh_A 226 NWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPN-------PVELGPGAFFGE 298 (355)
T ss_dssp HHC-----------------------------------------------------------------------------
T ss_pred cchhhhcccccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeeEEEEEECC-------eeEECCCCEEee
Confidence 3467889999999999999999999999999999999999999999999999999999743 257899999999
Q ss_pred cccccCCCcceeEEEeccceeeeechHhHHHHHHHHhhcchHHHHHhhhc
Q 015680 116 VSILCNIPQPYTVRICELSRLLRIDKQSFTSILEIYFCDGRKVLTNLLEG 165 (403)
Q Consensus 116 ~~ll~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~~~~~~~~~ll~~ll~~ 165 (403)
.+++.+.++.++++|.++|+++.++++.+.++++++|+....+.+.+.++
T Consensus 299 ~~~l~~~~~~~~~~A~~~~~l~~i~~~~f~~ll~~~p~~~~~l~~~l~~r 348 (355)
T 3beh_A 299 MALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSPEIAEIFRKTALER 348 (355)
T ss_dssp --------------------------------------------------
T ss_pred hHHhCCCCcceEEEECccEEEEEEeHHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988877766654
No 165
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=99.34 E-value=1.2e-12 Score=111.73 Aligned_cols=99 Identities=22% Similarity=0.239 Sum_probs=84.1
Q ss_pred HHHhheeeeCCCCeEEecCCcc--CeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccce
Q 015680 58 VIRLHEEFFLPGEVIMEQGNVI--DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSR 135 (403)
Q Consensus 58 ~~~~~~~~~~~ge~i~~~g~~~--~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~ 135 (403)
.+.+..+.|++|++|+.+|++. +.+|+|++|.|+++..+.+|++.++.++.+|++||+ +++.+.++..+++|.++|+
T Consensus 2 ~~~~~~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~-~~l~~~~~~~~~~A~~~~~ 80 (202)
T 2zcw_A 2 TQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGE-EALFGQERIYFAEAATDVR 80 (202)
T ss_dssp ----CCEEECTTCEEECSBSCCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECT-HHHHTCCBCSEEEESSCEE
T ss_pred CccceEEEECCCCEEECCCCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeee-hhcCCCCcceEEEEcccEE
Confidence 4567889999999999999999 999999999999999999999999999999999999 8888889999999999999
Q ss_pred eeeechHhHHHHHHHHhhcchHHHHHhhh
Q 015680 136 LLRIDKQSFTSILEIYFCDGRKVLTNLLE 164 (403)
Q Consensus 136 ~~~i~~~~~~~l~~~~~~~~~~ll~~ll~ 164 (403)
++.+ .+.|. |.....++..+..
T Consensus 81 v~~i-~~~~~------p~~~~~~~~~l~~ 102 (202)
T 2zcw_A 81 LEPL-PENPD------PELLKDLAQHLSQ 102 (202)
T ss_dssp EEEC-CSSCC------HHHHHHHHHHHHH
T ss_pred EEEE-hHhcC------HHHHHHHHHHHHH
Confidence 9999 88775 4444444444433
No 166
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.22 E-value=3.4e-11 Score=126.91 Aligned_cols=117 Identities=19% Similarity=0.271 Sum_probs=102.7
Q ss_pred HHhHHhhhccCCCCCCCHHHHHHHHHHhhe-eeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCc
Q 015680 34 TLYMPYIEKVSLFKGCSSEFINQIVIRLHE-EFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 112 (403)
Q Consensus 34 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~-~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~ 112 (403)
+...+.+.+++.|..|+...+..+...+.. ..+++|++|+++||..+.+|||++|.|.|++ .+ +..+..+.+|++
T Consensus 333 e~l~e~L~~i~~f~~Ls~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~~---~~-~~~v~~L~~Gd~ 408 (999)
T 4f7z_A 333 EIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVVI---YG-KGVVCTLHEGDD 408 (999)
T ss_dssp HHHHHHHTTCGGGTTSCHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEEE---TT-TEEEEEEETTCE
T ss_pred HHHHHHHHhhHHHhcCCHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEEE---cC-CcceEEecCCCc
Confidence 355678999999999999999999988875 4557899999999999999999999999986 22 235788999999
Q ss_pred ccccccccCCCcceeEEEecc-ceeeeechHhHHHHHHHHhhc
Q 015680 113 FGEVSILCNIPQPYTVRICEL-SRLLRIDKQSFTSILEIYFCD 154 (403)
Q Consensus 113 ~g~~~ll~~~~~~~~~~a~~~-~~~~~i~~~~~~~l~~~~~~~ 154 (403)
||+.+++++.|+.++++|.++ |++++++++.|..++......
T Consensus 409 FGElALL~~~PR~aTV~a~~d~c~fl~i~k~df~~il~~~e~~ 451 (999)
T 4f7z_A 409 FGKLALVNDAPRAASIVLREDNCHFLRVDKEDGNRILRDVEAN 451 (999)
T ss_dssp ECGGGGTCSCBCSSEEEESSSSEEEEEEEHHHHHHHHHHHHHS
T ss_pred ccchhhccCCCeeEEEEEecCceEEEEeeHHHHHHHHhHHHHh
Confidence 999999999999999999985 999999999999999876443
No 167
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=79.22 E-value=7.5 Score=32.60 Aligned_cols=71 Identities=11% Similarity=0.158 Sum_probs=52.8
Q ss_pred HhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeee
Q 015680 60 RLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRI 139 (403)
Q Consensus 60 ~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i 139 (403)
.+....+++|+.+-..-.+.+.+++|++|.+++.. +|+. ..+.+|+++-- ....+..+.+.+++.++.+
T Consensus 38 ~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i---~~~~---~~l~~Gd~~~~-----p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 38 YISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFI---ENNK---KTISNGDFLEI-----TANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp EEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEE---SSCE---EEEETTEEEEE-----CSSCCEEEEESSSEEEEEE
T ss_pred EEEEEEECCCCccCccccCCCEEEEEEeCEEEEEE---CCEE---EEECCCCEEEE-----CCCCCEEEEECCCcEEEEE
Confidence 34677899999998888889999999999999986 3443 57788885522 1223567778888888866
Q ss_pred ch
Q 015680 140 DK 141 (403)
Q Consensus 140 ~~ 141 (403)
..
T Consensus 107 ~~ 108 (227)
T 3rns_A 107 GE 108 (227)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 168
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=75.23 E-value=15 Score=26.79 Aligned_cols=66 Identities=14% Similarity=0.033 Sum_probs=44.3
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceee
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLL 137 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~ 137 (403)
+....+++|..+-..-.+...+++|++|.+++.. +|+ ...+.+|+.+--. ...+..+.+.+++.++
T Consensus 38 v~~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i~ip-----~~~~H~~~~~~~~~~~ 103 (114)
T 3fjs_A 38 VMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGV---DGA---QRRLHQGDLLYLG-----AGAAHDVNAITNTSLL 103 (114)
T ss_dssp EEEEEECTTCEEEEECCSSCEEEEEEESCEEEEE---TTE---EEEECTTEEEEEC-----TTCCEEEEESSSEEEE
T ss_pred EEEEEECCCCccCceeCCCcEEEEEEECEEEEEE---CCE---EEEECCCCEEEEC-----CCCcEEEEeCCCcEEE
Confidence 3466788998887766677899999999999986 333 3678888855321 1223455566665543
No 169
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=70.69 E-value=13 Score=26.85 Aligned_cols=67 Identities=19% Similarity=0.139 Sum_probs=40.4
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeee
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRI 139 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i 139 (403)
....+++|..+-....+...+++|++|.+.+.. +|+ ...+.+|+++--. .+. +..+.+.+++.++.+
T Consensus 41 ~~~~~~~g~~~~~H~h~~~e~~~vl~G~~~~~i---~~~---~~~l~~Gd~i~i~---~~~--~H~~~~~~~~~~~~i 107 (114)
T 2ozj_A 41 SLFSFADGESVSEEEYFGDTLYLILQGEAVITF---DDQ---KIDLVPEDVLMVP---AHK--IHAIAGKGRFKMLQI 107 (114)
T ss_dssp EEEEEETTSSCCCBCCSSCEEEEEEEEEEEEEE---TTE---EEEECTTCEEEEC---TTC--CBEEEEEEEEEEEEE
T ss_pred EEEEECCCCccccEECCCCeEEEEEeCEEEEEE---CCE---EEEecCCCEEEEC---CCC--cEEEEeCCCcEEEEE
Confidence 344566776654445566789999999999875 333 3578899865221 122 234444456655543
No 170
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=68.84 E-value=24 Score=25.25 Aligned_cols=67 Identities=13% Similarity=0.078 Sum_probs=41.3
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeee
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRI 139 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i 139 (403)
....+++|..+-..-.....+++|++|.+.+.. +|+ ...+.+|+++-..+ + .+..+.+..+++++.+
T Consensus 43 ~~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~~ip~---~--~~H~~~~~~~~~~~~v 109 (115)
T 1yhf_A 43 TVFSLDKGQEIGRHSSPGDAMVTILSGLAEITI---DQE---TYRVAEGQTIVMPA---G--IPHALYAVEAFQMLLV 109 (115)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEESEEEEEE---TTE---EEEEETTCEEEECT---T--SCEEEEESSCEEEEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeCEEEEEE---CCE---EEEECCCCEEEECC---C--CCEEEEECCCceEEEE
Confidence 456778888765544556789999999999875 333 25788888652211 1 2234445555555443
No 171
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=66.67 E-value=16 Score=34.86 Aligned_cols=141 Identities=17% Similarity=0.101 Sum_probs=68.4
Q ss_pred hhHHHhhccCCHHHHHHHH----HcCCCccccCCCCCcHHHHHHHcC-c-------------HHHHHHHHhcCCCCCcCC
Q 015680 192 LRFNSAAYHGDLYQLKGLI----RAGADLNKTDYDGRSPLHLATSRG-Y-------------EDITLFLIQKGVDINIKD 253 (403)
Q Consensus 192 ~~l~~a~~~~~~~~~~~ll----~~~~~~~~~~~~g~t~L~~A~~~~-~-------------~~~~~~Ll~~~~~~~~~~ 253 (403)
..|...+..|+.+-+..++ +.|..++... ++.|..|+... . .++++.+.+.|..+|...
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t---yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~t 107 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQYH---YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT 107 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH---HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH---HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHH
Confidence 3455566667665544433 3455444321 23444444321 1 234444555665554321
Q ss_pred CCCCcHHHHHHHcCChH----HHHHHHHcCCCccccCCCchHHHHHHcCCHHH----HHHHHHCCCCCCCCCCCCChHHH
Q 015680 254 KFGNTPLLEAIKCGHDG----VTSLLVKEGASLNVDDAGSFLCIAVARGDSDL----LKRVLSNGVDPNSRDYDHRTPLH 325 (403)
Q Consensus 254 ~~g~t~l~~A~~~~~~~----~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~----v~~Ll~~~~~~~~~~~~g~t~Lh 325 (403)
-++.+...+..|+.+ +++.+.+.|..++....++.+...+..|+.+- .+.+.+.|..++.... .+-+.
T Consensus 108 --yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty--~~Li~ 183 (501)
T 4g26_A 108 --FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPEL--AALLK 183 (501)
T ss_dssp --HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHH
T ss_pred --HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHH--HHHHH
Confidence 234455555666644 34444455666655544555666677777643 3344455655543321 23444
Q ss_pred HHHHcCcHHHHHHH
Q 015680 326 VAASEGLYLMAKLL 339 (403)
Q Consensus 326 ~A~~~~~~~~~~~L 339 (403)
..+..|+.+-+.-+
T Consensus 184 ~~~~~g~~d~A~~l 197 (501)
T 4g26_A 184 VSMDTKNADKVYKT 197 (501)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHhhCCCHHHHHHH
Confidence 55555665443333
No 172
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=65.89 E-value=14 Score=27.20 Aligned_cols=45 Identities=22% Similarity=0.354 Sum_probs=32.6
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+.+|..+-.. ...+.+++|++|.+.+.. +|+ ...+++||++
T Consensus 43 ~~~~~~pG~~~~~H-~~~~E~~~Vl~G~~~~~~---~g~---~~~l~~GD~v 87 (119)
T 3lwc_A 43 GYGRYAPGQSLTET-MAVDDVMIVLEGRLSVST---DGE---TVTAGPGEIV 87 (119)
T ss_dssp EEEEECTTCEEEEE-CSSEEEEEEEEEEEEEEE---TTE---EEEECTTCEE
T ss_pred EEEEECCCCCcCcc-CCCCEEEEEEeCEEEEEE---CCE---EEEECCCCEE
Confidence 34567788765544 367889999999999976 343 3568899866
No 173
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=64.29 E-value=10 Score=24.57 Aligned_cols=26 Identities=12% Similarity=0.161 Sum_probs=21.4
Q ss_pred CeEEEEeeeEEEEEeecCCCCeeEee
Q 015680 80 DQLYFVCHGVLEEVGVGEDGSEETVS 105 (403)
Q Consensus 80 ~~~~~v~~G~v~~~~~~~~g~~~~~~ 105 (403)
+.|.++-+|.++||+.+++..++.+.
T Consensus 30 nhFgv~e~g~iKIykyde~tNeI~Lk 55 (72)
T 3kvp_A 30 NHFGVMEDGYIKIYEYNESRNEVKLK 55 (72)
T ss_dssp TEEEEEETTEEEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCEEEEEEeCCCCCeEEEE
Confidence 57888899999999999887776543
No 174
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=64.15 E-value=25 Score=28.11 Aligned_cols=40 Identities=10% Similarity=0.171 Sum_probs=31.5
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEE
Q 015680 38 PYIEKVSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYF 84 (403)
Q Consensus 38 ~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~ 84 (403)
+.+. .|.|.+++..+..+++.. ..|++|+++.+.++++-+
T Consensus 10 R~I~-HP~F~n~s~~qAe~~L~~------~~G~~liRPSsk~~~lti 49 (178)
T 2xp1_A 10 RFYK-HPLFKNFNVTESENYLRS------STDDFLIRKGSRHGYCVL 49 (178)
T ss_dssp GGGG-STTEECCCHHHHHHHHHH------SSCCEEEEECSSTTEEEE
T ss_pred eecc-CCCcCCCCHHHHHHHHhc------CCCCEEEeecCCCCcEEE
Confidence 3445 499999999998888776 259999999998776433
No 175
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=62.02 E-value=36 Score=24.35 Aligned_cols=68 Identities=16% Similarity=0.084 Sum_probs=41.6
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeee
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRI 139 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i 139 (403)
.....+++|..+-..-.....+++|++|.+.+.. +|+ ...+.+|+++-..+ + .+..+.+..++.++.+
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~~ip~---~--~~H~~~~~~~~~~l~v 103 (116)
T 2pfw_A 36 AVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV---DGV---IKVLTAGDSFFVPP---H--VDHGAVCPTGGILIDT 103 (116)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEEECEEEEE---TTE---EEEECTTCEEEECT---T--CCEEEEESSCEEEEEE
T ss_pred EEEEEECCCCcCCcEECCcceEEEEEeeEEEEEE---CCE---EEEeCCCCEEEECc---C--CceeeEeCCCcEEEEE
Confidence 3456778887754444456789999999999875 333 35688888652211 1 2234444445555544
No 176
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=54.02 E-value=36 Score=28.29 Aligned_cols=66 Identities=23% Similarity=0.096 Sum_probs=44.5
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEE-eccceeee
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRI-CELSRLLR 138 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a-~~~~~~~~ 138 (403)
....+++|..+-..-.+.+.+++|++|.+.+.. +|+ ...+.+|+++--.+ + .+..+.+ .+++.++.
T Consensus 156 ~~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~i---~g~---~~~l~~Gd~i~ip~---~--~~H~~~~~~~~~~~ll 222 (227)
T 3rns_A 156 TIMSFWKGESLDPHKAPGDALVTVLDGEGKYYV---DGK---PFIVKKGESAVLPA---N--IPHAVEAETENFKMLL 222 (227)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEEEEEEEEE---TTE---EEEEETTEEEEECT---T--SCEEEECCSSCEEEEE
T ss_pred EEEEECCCCccCCEECCCcEEEEEEeEEEEEEE---CCE---EEEECCCCEEEECC---C--CcEEEEeCCCCEEEEE
Confidence 567889999877666667789999999999975 333 35778888652211 2 2345555 66665543
No 177
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=52.12 E-value=25 Score=25.76 Aligned_cols=47 Identities=17% Similarity=0.155 Sum_probs=34.7
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
+....+++|..+-..-.....+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 43 ~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~ 89 (126)
T 4e2g_A 43 LNWVRIEPNTEMPAHEHPHEQAGVMLEGTLELTI---GEE---TRVLRPGMAY 89 (126)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEECEEEEE---TTE---EEEECTTEEE
T ss_pred EEEEEECCCCcCCCccCCCceEEEEEEeEEEEEE---CCE---EEEeCCCCEE
Confidence 3566788888776655666789999999999976 332 3577888855
No 178
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=50.90 E-value=35 Score=32.36 Aligned_cols=101 Identities=13% Similarity=0.211 Sum_probs=64.3
Q ss_pred HHHHHHHHHcCCCccccCCCCCcHHHHHHHcCcHHHHHHH----HhcCCCCCcCCCCCCcHHHHHHHcCChH----HHHH
Q 015680 203 LYQLKGLIRAGADLNKTDYDGRSPLHLATSRGYEDITLFL----IQKGVDINIKDKFGNTPLLEAIKCGHDG----VTSL 274 (403)
Q Consensus 203 ~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L----l~~~~~~~~~~~~g~t~l~~A~~~~~~~----~v~~ 274 (403)
.++++.|.+.|..+|.... .+.+...+..|..+-+..+ .+.|..++... .++.+...++.|..+ +.+.
T Consensus 90 ~~lf~~M~~~G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 90 FDIFKQMIVDKVVPNEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHTTCCCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHH
Confidence 3566677778877654422 2456667778887644443 44566665432 334555666788754 5566
Q ss_pred HHHcCCCccccCCCchHHHHHHcCCHHHHHHHH
Q 015680 275 LVKEGASLNVDDAGSFLCIAVARGDSDLLKRVL 307 (403)
Q Consensus 275 L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll 307 (403)
+.+.|..++...-.+.+...+..|+.+-+..++
T Consensus 166 M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 166 MVESEVVPEEPELAALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHH
Confidence 667788777766667788888999886555554
No 179
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=50.73 E-value=27 Score=32.87 Aligned_cols=52 Identities=12% Similarity=0.088 Sum_probs=39.7
Q ss_pred heeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|-.+-.-=.+ .+.+++|++|..++...+.+|.......+.+|+++
T Consensus 341 ~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~ 393 (476)
T 1fxz_A 341 EFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVL 393 (476)
T ss_dssp EEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred EEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEE
Confidence 56677888765443334 57889999999999887777777666789999976
No 180
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=49.59 E-value=21 Score=28.44 Aligned_cols=51 Identities=22% Similarity=0.250 Sum_probs=36.3
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
+....+++|......-...+.+++|++|.+++...+.+|.+ ...+++||++
T Consensus 43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~--~~~l~~GDv~ 93 (178)
T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRD--TYKLDQGDAI 93 (178)
T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEE--EEEEETTEEE
T ss_pred EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcE--EEEECCCCEE
Confidence 34567888876544423347889999999999876555433 5689999966
No 181
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=49.28 E-value=31 Score=30.96 Aligned_cols=51 Identities=12% Similarity=0.140 Sum_probs=36.7
Q ss_pred heeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+.+|...-..-.. .+.+++|++|.+++...+.+|+.. ...+++||++
T Consensus 55 ~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~-~~~l~~GD~~ 106 (361)
T 2vqa_A 55 VYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE-IADVDKGGLW 106 (361)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE-EEEEETTEEE
T ss_pred EEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE-EEEEcCCCEE
Confidence 35567788765433344 779999999999999877666533 3688999865
No 182
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=49.12 E-value=40 Score=23.88 Aligned_cols=45 Identities=13% Similarity=0.010 Sum_probs=31.5
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..-.. .....+++|++|.+.+.. .+|+ ...+.+||.+
T Consensus 34 ~~~~~~pg~~~~h--H~~~E~~~Vl~G~~~~~i--~~g~---~~~l~~GD~i 78 (101)
T 1o5u_A 34 PIWEKEVSEFDWY--YDTNETCYILEGKVEVTT--EDGK---KYVIEKGDLV 78 (101)
T ss_dssp CEEEECSEEEEEE--CSSCEEEEEEEEEEEEEE--TTCC---EEEEETTCEE
T ss_pred EEEEeCCCccccc--CCceEEEEEEeCEEEEEE--CCCC---EEEECCCCEE
Confidence 3567788875444 446788999999999975 1133 3578899865
No 183
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=48.95 E-value=32 Score=32.56 Aligned_cols=55 Identities=11% Similarity=0.120 Sum_probs=40.7
Q ss_pred HHhheeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 59 IRLHEEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 59 ~~~~~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
-.+....+++|-.+-.-=.+ .+.+++|++|.+++...+.+|.......+.+|+++
T Consensus 367 ls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~ 422 (493)
T 2d5f_A 367 LSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLL 422 (493)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred eEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEE
Confidence 34466778888765443333 57889999999999887777776655779999976
No 184
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=48.93 E-value=20 Score=24.98 Aligned_cols=47 Identities=28% Similarity=0.240 Sum_probs=29.7
Q ss_pred eeeeCCCCeEEecCCccC-eEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIMEQGNVID-QLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~~~g~~~~-~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+++|...-..-.... .+++|++|.+.+.. .+|. ....+.+|+.+
T Consensus 22 ~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~g~--~~~~l~~Gd~~ 69 (97)
T 2fqp_A 22 EWRFPPGGETGWHRHSMDYVVVPMTTGPLLLET--PEGS--VTSQLTRGVSY 69 (97)
T ss_dssp EEEECTTCBCCSEECCSCEEEEESSCEEEEEEE--TTEE--EEEEECTTCCE
T ss_pred EEEECCCCCCCCEECCCCcEEEEEeecEEEEEe--CCCC--EEEEEcCCCEE
Confidence 456677765422233344 48999999999875 2221 24578899866
No 185
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=48.67 E-value=42 Score=27.23 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=35.5
Q ss_pred heeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCC--CCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGED--GSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~--g~~~~~~~~~~G~~~ 113 (403)
....+++|...-..-.+ ...+++|++|.+.+...+.+ |.+.....+.+|+++
T Consensus 75 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~ 129 (201)
T 1fi2_A 75 NRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETF 129 (201)
T ss_dssp EEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEE
T ss_pred EEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEE
Confidence 45678888765444344 46899999999998764432 234346778999866
No 186
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=48.16 E-value=29 Score=32.97 Aligned_cols=54 Identities=11% Similarity=0.116 Sum_probs=40.7
Q ss_pred HhheeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 60 RLHEEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 60 ~~~~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
.+....+++|-.+-.-=.+ .+.+++|++|.+.+...+.+|.......+.+|+++
T Consensus 373 s~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~ 427 (510)
T 3c3v_A 373 SAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVL 427 (510)
T ss_dssp EEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred EEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEE
Confidence 3456778888765443333 57889999999999887777776666789999976
No 187
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=46.51 E-value=32 Score=24.33 Aligned_cols=46 Identities=30% Similarity=0.354 Sum_probs=32.3
Q ss_pred heeeeCCCCeEEec--CCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQ--GNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~--g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-.. -.. ...+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 24 ~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~~---~~~l~~Gd~~ 72 (113)
T 2gu9_A 24 AEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DGH---TQALQAGSLI 72 (113)
T ss_dssp EEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TTE---EEEECTTEEE
T ss_pred EEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEE
Confidence 45577888876544 444 6788999999999875 332 3567888855
No 188
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=45.73 E-value=36 Score=30.91 Aligned_cols=51 Identities=12% Similarity=0.104 Sum_probs=36.9
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+.+|..+-..-.....+++|++|.+++...+.+|+.. ...+.+|+++
T Consensus 82 ~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~-~~~l~~GD~~ 132 (385)
T 1j58_A 82 VNMRLKPGAIRELHWHKEAEWAYMIYGSARVTIVDEKGRSF-IDDVGEGDLW 132 (385)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEEEEEEEEEECTTSCEE-EEEEETTEEE
T ss_pred EEEEECCCCCCCCccCChheEEEEEeeeEEEEEEeCCCcEE-EEEeCCCCEE
Confidence 45677888866444444778999999999998766666643 3478899865
No 189
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=43.75 E-value=47 Score=29.73 Aligned_cols=51 Identities=20% Similarity=0.209 Sum_probs=36.8
Q ss_pred heeeeCCCCeEEecCCcc-CeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVI-DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~-~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-..-.+. +.+++|++|.+.+...+.+|+ .....+++|+++
T Consensus 237 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~-~~~~~l~~GD~~ 288 (361)
T 2vqa_A 237 ALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFASEGK-ASVSRLQQGDVG 288 (361)
T ss_dssp EEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECSTTC-EEEEEECTTCEE
T ss_pred EEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcCCCc-EEEEEECCCCEE
Confidence 466778887765443444 789999999999987665665 234678899966
No 190
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=43.04 E-value=1.2e+02 Score=26.01 Aligned_cols=76 Identities=14% Similarity=-0.008 Sum_probs=50.7
Q ss_pred HhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccccc---ccccCCCcceeEEEecccee
Q 015680 60 RLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEV---SILCNIPQPYTVRICELSRL 136 (403)
Q Consensus 60 ~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~---~ll~~~~~~~~~~a~~~~~~ 136 (403)
.+....+++|+.+-.+-+..+...++++|.+++.. +|... ...-...++|... ++--.....++++|.+++++
T Consensus 30 ~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~---~g~~~-~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~~~~ 105 (270)
T 2qjv_A 30 GFDVWQLXAGESITLPSDERERCLVLVAGLASVXA---ADSFF-YRIGQRMSPFERIPAYSVYLPHHTEAXVTAETDLEL 105 (270)
T ss_dssp EEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEE---TTEEE-EEECCCSSGGGCSCCCEEEECSSCCEEEEESSSEEE
T ss_pred EEEEEEecCCCEEEecCCCcEEEEEEecceEEEEE---CCEEE-eccccccccccCCCCcEEEECCCCEEEEEecCCceE
Confidence 34678889999998888878888999999999986 33321 1112345666654 22223333677888888777
Q ss_pred eee
Q 015680 137 LRI 139 (403)
Q Consensus 137 ~~i 139 (403)
...
T Consensus 106 ~v~ 108 (270)
T 2qjv_A 106 AVC 108 (270)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 191
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=42.71 E-value=48 Score=31.56 Aligned_cols=54 Identities=20% Similarity=0.268 Sum_probs=42.1
Q ss_pred HhheeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 60 RLHEEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 60 ~~~~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
.+....+.+|-++-.-=.+ .+.+.+|++|.+++...+.+|+......+.+|+++
T Consensus 395 S~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~ 449 (531)
T 3fz3_A 395 SAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLF 449 (531)
T ss_dssp EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred eEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEE
Confidence 3467788888766443222 57889999999999988888887778899999977
No 192
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=42.40 E-value=32 Score=27.01 Aligned_cols=46 Identities=22% Similarity=0.164 Sum_probs=32.4
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-..-.....+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 59 ~~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i 104 (167)
T 3ibm_A 59 RYFEVEPGGYTTLERHEHTHVVMVVRGHAEVVL---DDR---VEPLTPLDCV 104 (167)
T ss_dssp EEEEECTTCBCCCBBCSSCEEEEEEESEEEEEE---TTE---EEEECTTCEE
T ss_pred EEEEECCCCCCCCccCCCcEEEEEEeCEEEEEE---CCE---EEEECCCCEE
Confidence 345677777654444557789999999999875 333 4577888865
No 193
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=41.67 E-value=50 Score=22.67 Aligned_cols=46 Identities=17% Similarity=0.188 Sum_probs=31.4
Q ss_pred heeeeCCCCeEEecCCcc-CeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVI-DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~-~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-..-... +.+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 31 ~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~---~~~l~~Gd~~ 77 (105)
T 1v70_A 31 DLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GEE---EALLAPGMAA 77 (105)
T ss_dssp EEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TTE---EEEECTTCEE
T ss_pred EEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEE
Confidence 455778888765444343 468999999999875 232 3577888865
No 194
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=40.30 E-value=20 Score=20.32 Aligned_cols=17 Identities=24% Similarity=0.167 Sum_probs=11.5
Q ss_pred HHHHHHcCcHHHHHHHH
Q 015680 227 LHLATSRGYEDITLFLI 243 (403)
Q Consensus 227 L~~A~~~~~~~~~~~Ll 243 (403)
+..||+.|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677777777777663
No 195
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=38.93 E-value=78 Score=23.66 Aligned_cols=43 Identities=12% Similarity=-0.000 Sum_probs=28.8
Q ss_pred eeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+.+|..-.. ...+.+++|++|.+.+.. +|+. ..+.+||.+
T Consensus 61 ~~~~~pG~~~~h--~~~~E~~~VLeG~~~l~~---~g~~---~~l~~GD~i 103 (133)
T 2pyt_A 61 FMQWDNAFFPWT--LNYDEIDMVLEGELHVRH---EGET---MIAKAGDVM 103 (133)
T ss_dssp EEEEEEEEEEEE--CSSEEEEEEEEEEEEEEE---TTEE---EEEETTCEE
T ss_pred EEEECCCCcccc--CCCCEEEEEEECEEEEEE---CCEE---EEECCCcEE
Confidence 456677742222 235688999999999986 3433 378899866
No 196
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=36.28 E-value=67 Score=24.33 Aligned_cols=51 Identities=14% Similarity=-0.087 Sum_probs=30.6
Q ss_pred eeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+++|..+-..-.. .+.+++|++|.+.+..-...+.......+.+|+++
T Consensus 47 ~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i 98 (148)
T 2oa2_A 47 LMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAI 98 (148)
T ss_dssp EEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEE
T ss_pred EEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEE
Confidence 4466777654332233 34889999999999863222111123577888855
No 197
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=36.18 E-value=36 Score=25.00 Aligned_cols=44 Identities=16% Similarity=0.166 Sum_probs=29.5
Q ss_pred eeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 64 EFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 64 ~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
-.+.+|..-+... ..+-+++|++|.+.+.- .+|.. ..+++||.+
T Consensus 47 We~tPG~~~~~~~-~~~E~~~iLeG~~~lt~--ddG~~---~~l~aGD~~ 90 (116)
T 3es4_A 47 WMAEPGIYNYAGR-DLEETFVVVEGEALYSQ--ADADP---VKIGPGSIV 90 (116)
T ss_dssp EEECSEEEEECCC-SEEEEEEEEECCEEEEE--TTCCC---EEECTTEEE
T ss_pred EecCCceeECeeC-CCcEEEEEEEeEEEEEe--CCCeE---EEECCCCEE
Confidence 3566776555543 23468899999999964 44543 477888866
No 198
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=35.87 E-value=34 Score=25.39 Aligned_cols=44 Identities=14% Similarity=0.139 Sum_probs=28.9
Q ss_pred eeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 64 EFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 64 ~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
-.+.+|..-....+ .+.+++|++|.+.+.. ++|+. ..+++||.+
T Consensus 54 w~~~pG~~~~~~~~-~~E~~~Vl~G~~~l~~--~~g~~---~~l~~GD~~ 97 (123)
T 3bcw_A 54 WESTSGSFQSNTTG-YIEYCHIIEGEARLVD--PDGTV---HAVKAGDAF 97 (123)
T ss_dssp EEEEEEEEECCCTT-EEEEEEEEEEEEEEEC--TTCCE---EEEETTCEE
T ss_pred EEECCCceeeEcCC-CcEEEEEEEEEEEEEE--CCCeE---EEECCCCEE
Confidence 34556665543322 2788999999999974 34443 467899866
No 199
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=35.80 E-value=86 Score=28.62 Aligned_cols=66 Identities=23% Similarity=0.257 Sum_probs=41.5
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHH
Q 015680 292 CIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKL 371 (403)
Q Consensus 292 ~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~ 371 (403)
++.+.-|+...|+..+..|-+.+.+ -|+.-.+ |+.. .+. -.-|.|.+|+|++..+.+++..
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~----lt~~e~~-----------lln~-~~a---f~~g~tlvhlair~~r~~~l~~ 87 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQ----LTADEVR-----------LLNR-PSA---FDVGYTLVHLAIRFQRQDMLAI 87 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCC----CCHHHHH-----------HHCC-TTT---CCTTCCHHHHHHHTTCHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcc----cCHHHHH-----------HhCC-Ccc---cccCchhhhhhhhhhhhhHHHH
Confidence 4566677777777777776665443 1221111 1111 111 2468999999999999999999
Q ss_pred HHHcc
Q 015680 372 LEDAK 376 (403)
Q Consensus 372 Ll~~~ 376 (403)
|+..+
T Consensus 88 ll~~~ 92 (454)
T 3zrh_A 88 LLTEV 92 (454)
T ss_dssp HHHHH
T ss_pred hhhcc
Confidence 98743
No 200
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=35.54 E-value=73 Score=26.67 Aligned_cols=46 Identities=9% Similarity=0.035 Sum_probs=33.2
Q ss_pred eeeeCC-CCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccc
Q 015680 63 EEFFLP-GEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 114 (403)
Q Consensus 63 ~~~~~~-ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g 114 (403)
...+++ |..+-..-.+...+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 149 ~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i~ 195 (243)
T 3h7j_A 149 LAKIPGNGGEMPFHKHRNEQIGICIGGGYDMTV---EGC---TVEMKFGTAYF 195 (243)
T ss_dssp EEEECTTTEEEEEECCSSEEEEEECSSCEEEEE---TTE---EEEECTTCEEE
T ss_pred EEEECCCCCcCCCEeCCCcEEEEEEECEEEEEE---CCE---EEEECCCCEEE
Confidence 445888 87766555566789999999999875 333 34588998653
No 201
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=34.40 E-value=61 Score=29.32 Aligned_cols=52 Identities=12% Similarity=-0.020 Sum_probs=34.9
Q ss_pred heeeeCCCCeEEecCCcc-CeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccc
Q 015680 62 HEEFFLPGEVIMEQGNVI-DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 114 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~-~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g 114 (403)
....+++|...-..-... +.+++|++|.+++..-..+|+. ....+.+|+++-
T Consensus 260 ~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~-~~~~l~~GD~~~ 312 (385)
T 1j58_A 260 ALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHA-RTFNYQAGDVGY 312 (385)
T ss_dssp EEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETTEE-EEEEEESSCEEE
T ss_pred EEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCCcE-EEEEEcCCCEEE
Confidence 345677777664443444 7899999999998865455532 245788998663
No 202
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=33.07 E-value=42 Score=26.64 Aligned_cols=47 Identities=17% Similarity=0.120 Sum_probs=29.8
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|...-..-.....+++|++|.+.+.. .+|+ ...+++|+.+
T Consensus 82 ~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~l--d~ge---~~~L~~GDsi 128 (172)
T 3es1_A 82 RVVDMLPGKESPMHRTNSIDYGIVLEGEIELEL--DDGA---KRTVRQGGII 128 (172)
T ss_dssp EEEEECTTCBCCCBCCSEEEEEEEEESCEEEEC--GGGC---EEEECTTCEE
T ss_pred EEEEECCCCCCCCeecCceEEEEEEeCEEEEEE--CCCe---EEEECCCCEE
Confidence 345666765433333334467899999999975 1133 3568899976
No 203
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=33.01 E-value=58 Score=24.76 Aligned_cols=47 Identities=17% Similarity=0.115 Sum_probs=31.4
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-..-.....+++|++|.+.+.. +|+. ...+.+|+++
T Consensus 51 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~---~~~~--~~~l~~Gd~i 97 (147)
T 2f4p_A 51 YDVVFEPGARTHWHSHPGGQILIVTRGKGFYQE---RGKP--ARILKKGDVV 97 (147)
T ss_dssp EEEEECTTCEECSEECTTCEEEEEEEEEEEEEE---TTSC--CEEEETTCEE
T ss_pred EEEEECCCCccCceECCCceEEEEEeCEEEEEE---CCEE--EEEECCCCEE
Confidence 355677777654333445689999999999875 3332 2467788865
No 204
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=32.87 E-value=42 Score=24.43 Aligned_cols=48 Identities=17% Similarity=0.123 Sum_probs=31.8
Q ss_pred hheeeeCCCCeEEecCCcc-CeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 61 LHEEFFLPGEVIMEQGNVI-DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~-~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
+....+++|..+-..-... ..+++|++|.+.+.. .+|+. ..+.+|+++
T Consensus 41 ~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~--~~~~~---~~l~~Gd~~ 89 (125)
T 3h8u_A 41 VVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ--GNGIV---THLKAGDIA 89 (125)
T ss_dssp EEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC--STTCE---EEEETTEEE
T ss_pred EEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE--CCCeE---EEeCCCCEE
Confidence 3456788888765554553 577889999999863 13333 467788855
No 205
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=32.56 E-value=85 Score=29.36 Aligned_cols=54 Identities=6% Similarity=0.061 Sum_probs=39.7
Q ss_pred HhheeeeCCCCeEEecCC-ccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 60 RLHEEFFLPGEVIMEQGN-VIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 60 ~~~~~~~~~ge~i~~~g~-~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
.+....+.+|-+....=. ....+++|++|..++...+.+|...+-..+.+|++|
T Consensus 323 S~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~ 377 (459)
T 2e9q_A 323 SAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVL 377 (459)
T ss_dssp EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred ceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEE
Confidence 335667777765543222 256889999999999988888876666789999977
No 206
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=32.48 E-value=77 Score=26.16 Aligned_cols=74 Identities=15% Similarity=0.060 Sum_probs=41.2
Q ss_pred HhHHhhhccCCCCCCCHHHHHH-HHHH-hheeee------------------CCCCeEEecCCccCeEEEEeeeEEEEEe
Q 015680 35 LYMPYIEKVSLFKGCSSEFINQ-IVIR-LHEEFF------------------LPGEVIMEQGNVIDQLYFVCHGVLEEVG 94 (403)
Q Consensus 35 ~~~~~l~~~~~f~~l~~~~~~~-l~~~-~~~~~~------------------~~ge~i~~~g~~~~~~~~v~~G~v~~~~ 94 (403)
......-...|-...+...... +.+. ....-+ ++|..+=.--.+.+.+|+|++|.+.+..
T Consensus 88 al~~~~~~L~Wr~~y~~~~~~~~f~~~~a~~elvGP~g~~~s~~l~lG~v~l~PG~~yP~HsHp~EEiy~VLsG~~e~~v 167 (217)
T 4b29_A 88 ALVAAAPHVEWRHSYTEAEVGRDFLNRFGWFELAGPSGHFLTQSLRVTVGYWGPGLDYGWHEHLPEELYSVVSGRALFHL 167 (217)
T ss_dssp HHHHHGGGSBCBCCSCHHHHCHHHHHHEEEEEEEETTSSEECSSCEEEEEEECSSCEEEEEECSSEEEEEEEEECEEEEE
T ss_pred HHHHhCCCCeEeeccCCCCcChhHHhCceEEEEECCCCCCCCCeEEEEEEEECCCCcCCCCCCCCceEEEEEeCCEEEEE
Confidence 3345566677777777754222 3322 233333 3333322223456789999999998876
Q ss_pred ecCCCCeeEeeeecCCCcc
Q 015680 95 VGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 95 ~~~~g~~~~~~~~~~G~~~ 113 (403)
.+|+ ...+.+|+++
T Consensus 168 --~~g~---~~~l~pGd~v 181 (217)
T 4b29_A 168 --RNAP---DLMLEPGQTR 181 (217)
T ss_dssp --TTSC---CEEECTTCEE
T ss_pred --CCCC---EEecCCCCEE
Confidence 1232 2467788755
No 207
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=32.21 E-value=34 Score=26.55 Aligned_cols=45 Identities=7% Similarity=-0.078 Sum_probs=29.8
Q ss_pred eeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+++|..+-..-.....+++|++|.+++.. +|+ ...+.+|+++
T Consensus 48 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~v---~g~---~~~l~~Gd~i 92 (156)
T 3kgz_A 48 YFEVDEGGYSTLERHAHVHAVMIHRGHGQCLV---GET---ISDVAQGDLV 92 (156)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEEEEEEEE---TTE---EEEEETTCEE
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEE
Confidence 34556666544444455678999999999985 333 3567788855
No 208
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=32.01 E-value=1.2e+02 Score=24.07 Aligned_cols=49 Identities=18% Similarity=0.178 Sum_probs=30.5
Q ss_pred eeeeCCCCeEE---ecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIM---EQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~---~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+++|...- ..-.....+++|++|.+.+.. . ++.......+.+|+++
T Consensus 121 ~~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~~-~-~~~~~~~~~l~~GD~~ 172 (198)
T 2bnm_A 121 VVDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMKW-G-DKENPKEALLPTGASM 172 (198)
T ss_dssp EEEECCCCGGGCCCCCCCSSCEEEEEEESCEEEEE-S-CTTSCEEEEECTTCEE
T ss_pred EEEEcCCCCCcccccccCCCeEEEEEEeeeEEEEE-C-CcCCcccEEECCCCEE
Confidence 34566776433 122334678999999999986 2 1111234688999866
No 209
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=31.95 E-value=41 Score=24.16 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=28.4
Q ss_pred eeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+++|..+-..-.....+++|++|.+.+.. +|+.. ..+.+|+++
T Consensus 31 ~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~~~--~~l~~Gd~i 76 (117)
T 2b8m_A 31 HIVLPRGEQMPKHYSNSYVHLIIIKGEMTLTL---EDQEP--HNYKEGNIV 76 (117)
T ss_dssp EEEEETTCBCCCEECSSCEEEEEEESEEEEEE---TTSCC--EEEETTCEE
T ss_pred EEEECCCCcCCCEeCCCcEEEEEEeCEEEEEE---CCEEE--EEeCCCCEE
Confidence 34556665542223345678999999999875 33322 267788855
No 210
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=31.89 E-value=52 Score=24.12 Aligned_cols=46 Identities=17% Similarity=0.204 Sum_probs=30.5
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|...-..-.....+++|++|.+.+.. +|+. ..+.+|+++
T Consensus 51 ~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~i---~~~~---~~l~~Gd~i 96 (126)
T 1vj2_A 51 RLFTVEPGGLIDRHSHPWEHEIFVLKGKLTVLK---EQGE---ETVEEGFYI 96 (126)
T ss_dssp EEEEEEEEEEEEEECCSSCEEEEEEESEEEEEC---SSCE---EEEETTEEE
T ss_pred EEEEECCCCcCCceeCCCcEEEEEEEeEEEEEE---CCEE---EEECCCCEE
Confidence 345566666554444446788999999999875 3332 467788755
No 211
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=31.73 E-value=1.6e+02 Score=24.61 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=31.3
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|...-..- .+.+++|++|.+.+.. +|++ ..+.+|+.+
T Consensus 53 ~~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~~---~~~~---~~l~~Gd~~ 96 (246)
T 1sfn_A 53 FTAEMPAGAQATESV--YQRFAFVLSGEVDVAV---GGET---RTLREYDYV 96 (246)
T ss_dssp EEEEECTTCEEECCS--SEEEEEEEEEEEEEEC---SSCE---EEECTTEEE
T ss_pred EEEEECCCCcCCCCc--eeEEEEEEECEEEEEE---CCEE---EEECCCCEE
Confidence 356778887654442 6788899999999975 4443 578899865
No 212
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=31.11 E-value=64 Score=23.92 Aligned_cols=46 Identities=11% Similarity=0.108 Sum_probs=31.0
Q ss_pred heeeeCCCCeEEecCCc-cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNV-IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~-~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-..-.. ...+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 60 ~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~~~---~~~l~~Gd~i 106 (133)
T 1o4t_A 60 ARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---NGK---DVPIKAGDVC 106 (133)
T ss_dssp EEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---TTE---EEEEETTEEE
T ss_pred EEEEECCCCccCceECCCccEEEEEEeCEEEEEE---CCE---EEEeCCCcEE
Confidence 35577888765433333 3678999999999875 332 3567888865
No 213
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=31.01 E-value=55 Score=24.89 Aligned_cols=63 Identities=5% Similarity=0.080 Sum_probs=38.1
Q ss_pred cCCccCeEEEEeeeEEEEEeecC--CCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechH
Q 015680 75 QGNVIDQLYFVCHGVLEEVGVGE--DGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQ 142 (403)
Q Consensus 75 ~g~~~~~~~~v~~G~v~~~~~~~--~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~ 142 (403)
.-+..+-+|+|++|.+.+...+. ++...-.-.+.+|+++-... .-...-.|..+|.++.|...
T Consensus 46 ~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPk-----GveH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 46 IHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPA-----ECWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp EESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECT-----TCEEEEEECTTCEEEEEEES
T ss_pred cCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCC-----CccCcccCCCceEEEEEEeC
Confidence 34557889999999999986432 11112345778988773311 11233455667777766554
No 214
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=30.88 E-value=88 Score=21.36 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=30.2
Q ss_pred CeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeec
Q 015680 80 DQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRID 140 (403)
Q Consensus 80 ~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~ 140 (403)
..+++|++|.+.+.. +|+ ...+.+|+++--. .+. .....+..++.++.++
T Consensus 51 ~e~~~v~~G~~~~~~---~~~---~~~l~~Gd~~~ip---~~~--~H~~~~~~~~~~l~i~ 100 (102)
T 3d82_A 51 DEVFIVMEGTLQIAF---RDQ---NITLQAGEMYVIP---KGV--EHKPMAKEECKIMIIE 100 (102)
T ss_dssp CEEEEEEESEEEEEC---SSC---EEEEETTEEEEEC---TTC--CBEEEEEEEEEEEEEE
T ss_pred cEEEEEEeCEEEEEE---CCE---EEEEcCCCEEEEC---CCC--eEeeEcCCCCEEEEEE
Confidence 688999999999875 333 3466788755211 122 2334444566666654
No 215
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=30.73 E-value=78 Score=25.15 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=28.4
Q ss_pred eeeCCCCeEEe--cCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 64 EFFLPGEVIME--QGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 64 ~~~~~ge~i~~--~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
..+++|..... -......+++|++|.+.+.. +|+ ...+.+||++
T Consensus 109 ~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~~---~~~---~~~l~~GD~i 154 (192)
T 1y9q_A 109 ITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFF---DEQ---WHELQQGEHI 154 (192)
T ss_dssp EEECTTCEEEECCCSTTCEEEEEEEESCEEEEE---TTE---EEEECTTCEE
T ss_pred EEECCCCCccCCCCCCCCEEEEEEEEeEEEEEE---CCE---EEEeCCCCEE
Confidence 35566665432 22334588999999999876 333 3478899865
No 216
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=30.70 E-value=35 Score=26.84 Aligned_cols=45 Identities=13% Similarity=-0.000 Sum_probs=30.2
Q ss_pred eeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+++|..+-..-.....+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 57 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~v---~g~---~~~l~~GD~i 101 (166)
T 3jzv_A 57 YFEVGPGGHSTLERHQHAHGVMILKGRGHAMV---GRA---VSAVAPYDLV 101 (166)
T ss_dssp EEEEEEEEECCCBBCSSCEEEEEEEECEEEEE---TTE---EEEECTTCEE
T ss_pred EEEECCCCccCceeCCCcEEEEEEeCEEEEEE---CCE---EEEeCCCCEE
Confidence 34556666554444455678999999999875 333 3577888865
No 217
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=30.68 E-value=51 Score=27.77 Aligned_cols=48 Identities=8% Similarity=0.027 Sum_probs=35.1
Q ss_pred HhheeeeCCCCeEEe-cCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 60 RLHEEFFLPGEVIME-QGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 60 ~~~~~~~~~ge~i~~-~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
.+...+++||..+-. +-...+..++|++|++.+.. +|+. ..+++||++
T Consensus 166 ~~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~~---~~~~---~~l~~GD~~ 214 (246)
T 1sfn_A 166 MVSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYKL---EENY---YPVTAGDII 214 (246)
T ss_dssp EEEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEEE---TTEE---EEEETTCEE
T ss_pred EEEEEEECCCCccCcccCCCceEEEEEEECEEEEEE---CCEE---EEcCCCCEE
Confidence 346778899987653 44556789999999999875 4443 478899865
No 218
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=30.04 E-value=47 Score=31.00 Aligned_cols=50 Identities=22% Similarity=0.225 Sum_probs=37.0
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....++||..+-..-...+.+++|++|+..+...++++. ....+++||++
T Consensus 89 ~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~--~~~~l~~GDv~ 138 (445)
T 2cav_A 89 LEYCSKPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGR--DTYKLDQGDAI 138 (445)
T ss_dssp EEEEECSSEEEEEEEESSEEEEEEEESEEEEEEEETTEE--EEEEEETTEEE
T ss_pred EEEEECCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCC--EEEEecCCCEE
Confidence 456788887665554446789999999999987655543 46788999976
No 219
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=30.02 E-value=83 Score=26.93 Aligned_cols=70 Identities=16% Similarity=0.091 Sum_probs=41.3
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCC-CCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeec
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGED-GSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRID 140 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~-g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~ 140 (403)
...++++|...-......+.+.+|++|.+.+.. + |++ ..+++|+.+-..+ +. ..+++..++++++.+.
T Consensus 73 ~lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~l---~~g~~---~~L~~Gds~y~p~---~~--~H~~~N~~~Ar~l~V~ 141 (266)
T 4e2q_A 73 YLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTN---TSSSS---KKLTVDSYAYLPP---NF--HHSLDCVESATLVVFE 141 (266)
T ss_dssp EEEEECSSEECCCCCTTEEEEEEEEEECEEEEC-----CCC---EEECTTEEEEECT---TC--CCEEEESSCEEEEEEE
T ss_pred EEEEECcCCcCCCCCCCCeEEEEEEEEEEEEEE---CCCcE---EEEcCCCEEEECC---CC--CEEEEeCCCEEEEEEE
Confidence 356677776532223445789999999999975 3 443 4678888653222 11 2233334567777665
Q ss_pred hH
Q 015680 141 KQ 142 (403)
Q Consensus 141 ~~ 142 (403)
+.
T Consensus 142 k~ 143 (266)
T 4e2q_A 142 RR 143 (266)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 220
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=29.61 E-value=70 Score=25.19 Aligned_cols=30 Identities=17% Similarity=0.093 Sum_probs=22.5
Q ss_pred cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccc
Q 015680 79 IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 114 (403)
Q Consensus 79 ~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g 114 (403)
.+.+++|++|.+.+.. +|+ ...+.+|+.+-
T Consensus 110 gEE~~yVLeG~v~vtl---~g~---~~~L~~Gds~~ 139 (166)
T 2vpv_A 110 TYITFHVIQGIVEVTV---CKN---KFLSVKGSTFQ 139 (166)
T ss_dssp EEEEEEEEESEEEEEE---TTE---EEEEETTCEEE
T ss_pred ceEEEEEEEeEEEEEE---CCE---EEEEcCCCEEE
Confidence 4568999999999986 332 35788998663
No 221
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=29.53 E-value=63 Score=25.62 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=26.5
Q ss_pred ccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccc
Q 015680 78 VIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 115 (403)
Q Consensus 78 ~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~ 115 (403)
+.+-+|++++|.+.+...+ +|+ .....+++|++|-.
T Consensus 54 ~~dE~FyvlkG~m~i~v~d-~g~-~~~v~l~eGE~f~l 89 (174)
T 1yfu_A 54 PLEEFFYQLRGNAYLNLWV-DGR-RERADLKEGDIFLL 89 (174)
T ss_dssp SSCEEEEEEESCEEEEEEE-TTE-EEEEEECTTCEEEE
T ss_pred CCceEEEEEeeEEEEEEEc-CCc-eeeEEECCCCEEEe
Confidence 4678899999999998654 343 33468889998743
No 222
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=29.01 E-value=76 Score=26.54 Aligned_cols=47 Identities=13% Similarity=0.059 Sum_probs=35.0
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
+....+++|..+-..-.+...+++|++|.+.+.. +|+ ...+.+|+.+
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~---~~~---~~~l~~Gd~i 82 (243)
T 3h7j_A 36 VLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTV---GDV---TRKMTALESA 82 (243)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEESEEEEEE---TTE---EEEEETTTCE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEEeEEEEEE---CCE---EEEECCCCEE
Confidence 4455689998877666667889999999999986 333 3577888843
No 223
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=28.70 E-value=74 Score=25.22 Aligned_cols=59 Identities=10% Similarity=0.060 Sum_probs=35.3
Q ss_pred CccCeEEEEeeeEEEEEeecCCC---CeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeech
Q 015680 77 NVIDQLYFVCHGVLEEVGVGEDG---SEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDK 141 (403)
Q Consensus 77 ~~~~~~~~v~~G~v~~~~~~~~g---~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~ 141 (403)
++.+-+|++++|.+.+...+ +| .......+.+|++|-... +.+ .+-.+..++..+.+.+
T Consensus 52 ~~~eE~Fy~lkG~m~l~v~d-~g~~~~~~~dv~i~eGdmfllP~---gvp--HsP~r~~e~v~lviEr 113 (176)
T 1zvf_A 52 NPTPEWFYQKKGSMLLKVVD-ETDAEPKFIDIIINEGDSYLLPG---NVP--HSPVRFADTVGIVVEQ 113 (176)
T ss_dssp CSSCEEEEEEESCEEEEEEE-CSSSSCEEEEEEECTTEEEEECT---TCC--EEEEECTTCEEEEEEE
T ss_pred CCCceEEEEEeCEEEEEEEc-CCCcccceeeEEECCCCEEEcCC---CCC--cCCcccCCcEEEEEEe
Confidence 34568899999999999755 33 223346788999874322 222 2222334555555444
No 224
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=28.62 E-value=1e+02 Score=27.90 Aligned_cols=74 Identities=18% Similarity=0.229 Sum_probs=49.4
Q ss_pred eeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHh
Q 015680 64 EFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQS 143 (403)
Q Consensus 64 ~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~ 143 (403)
..+++|+..-..-.....+|.|++|.-.... +|+ ....++||+|-.-+. ......+.+++.++.++-..
T Consensus 284 ~~L~pG~~t~~hRht~s~Vy~V~eG~G~~~I---~~~---~~~w~~gD~fvvP~w-----~~h~~~n~~~a~Lf~~~D~P 352 (368)
T 3nw4_A 284 HRLRAGTETATRNEVGSTVFQVFEGAGAVVM---NGE---TTKLEKGDMFVVPSW-----VPWSLQAETQFDLFRFSDAP 352 (368)
T ss_dssp EEECTTCBCCCEEESSCEEEEEEESCEEEEE---TTE---EEEECTTCEEEECTT-----CCEEEEESSSEEEEEEESHH
T ss_pred EEECCCCccCCeeccccEEEEEEeCcEEEEE---CCE---EEEecCCCEEEECCC-----CcEEEEeCCCEEEEEEeCHH
Confidence 3445555544444666788999999988876 332 356789998854432 23555667888888888877
Q ss_pred HHHHH
Q 015680 144 FTSIL 148 (403)
Q Consensus 144 ~~~l~ 148 (403)
+.+.+
T Consensus 353 l~~~L 357 (368)
T 3nw4_A 353 IMEAL 357 (368)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 66543
No 225
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=28.45 E-value=54 Score=25.32 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=31.3
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCC---CeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDG---SEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g---~~~~~~~~~~G~~~ 113 (403)
....+++|..+-..-.....+++|++|.+.+..-..++ .+.....+.+|+++
T Consensus 44 ~~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i 98 (163)
T 1lr5_A 44 WLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTF 98 (163)
T ss_dssp EEEEECTTCBCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEE
T ss_pred EEEEECCCCcCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEE
Confidence 34567777654322233557899999999988622111 11134578888865
No 226
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=28.30 E-value=69 Score=29.99 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=37.8
Q ss_pred heeeeCCCCeEEecC-CccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQG-NVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g-~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+.+|-+.-.-= -....+.+|++|.+++...+.+|+......+.+|++|
T Consensus 326 a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~ 378 (466)
T 3kgl_A 326 LRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLL 378 (466)
T ss_dssp EEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred EEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEE
Confidence 455566665432211 2356789999999999988888887777889999976
No 227
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=28.29 E-value=90 Score=25.18 Aligned_cols=45 Identities=13% Similarity=0.136 Sum_probs=33.3
Q ss_pred HhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCccc
Q 015680 60 RLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFG 114 (403)
Q Consensus 60 ~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g 114 (403)
.....+|++|..+-........+.+|++|... +.. ..+.+|+++-
T Consensus 126 ~v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~----de~------~~~~~Gd~~~ 170 (195)
T 2q1z_B 126 IARLLWIPGGQAVPDHGHRGLELTLVLQGAFR----DET------DRFGAGDIEI 170 (195)
T ss_dssp EEEEEEECTTCBCCCCCCSSCEEEEEEESEEE----CSS------SEEETTCEEE
T ss_pred EEEEEEECCCCCCCCcCCCCeEEEEEEEEEEE----CCc------EEECCCeEEE
Confidence 34577889999888888888899999999864 221 3577888653
No 228
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=27.28 E-value=73 Score=30.11 Aligned_cols=53 Identities=8% Similarity=0.069 Sum_probs=38.9
Q ss_pred hheeeeCCCCeEEecC-CccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 61 LHEEFFLPGEVIMEQG-NVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g-~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
+....+.+|-+.-..= -....+.+|++|.+++...+.+|+..+-..+.+|++|
T Consensus 360 ~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~ 413 (496)
T 3ksc_A 360 AEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRAL 413 (496)
T ss_dssp EEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred EEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEE
Confidence 3556667776543221 2356889999999999988888887666789999976
No 229
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=27.28 E-value=79 Score=29.60 Aligned_cols=52 Identities=8% Similarity=0.052 Sum_probs=38.1
Q ss_pred heeeeCCCCeEEecC-CccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQG-NVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g-~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+.+|-+.-.-= -....+.+|++|.+++...+.+|+..+-..+.+|++|
T Consensus 326 a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVf 378 (465)
T 3qac_A 326 AKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLV 378 (465)
T ss_dssp EEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEE
T ss_pred EEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEE
Confidence 456667766543211 2256788999999999988888887767789999977
No 230
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=27.25 E-value=74 Score=29.75 Aligned_cols=62 Identities=10% Similarity=0.069 Sum_probs=42.1
Q ss_pred HHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCee--------------------EeeeecCCC
Q 015680 52 EFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEE--------------------TVSQLQPNS 111 (403)
Q Consensus 52 ~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~--------------------~~~~~~~G~ 111 (403)
.++...--.+....+.+|-.+...=.....+++|++|...+....+++.+. .+..+++||
T Consensus 56 ~~l~~~gvs~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GD 135 (459)
T 2e9q_A 56 DEFQCAGVNMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGD 135 (459)
T ss_dssp HHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTE
T ss_pred hhhccCceEEEEEEEcCCCEecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCC
Confidence 344433334456788888877554445779999999999998765554322 256889999
Q ss_pred cc
Q 015680 112 SF 113 (403)
Q Consensus 112 ~~ 113 (403)
++
T Consensus 136 v~ 137 (459)
T 2e9q_A 136 LL 137 (459)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 231
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=27.16 E-value=1.1e+02 Score=21.38 Aligned_cols=54 Identities=11% Similarity=0.017 Sum_probs=32.4
Q ss_pred CeEEEEeeeEEEEEeecCCC-CeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechHhH
Q 015680 80 DQLYFVCHGVLEEVGVGEDG-SEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQSF 144 (403)
Q Consensus 80 ~~~~~v~~G~v~~~~~~~~g-~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~~~ 144 (403)
..+++|++|.+.+.. +| + ...+.+|+++--. .+.+ ....+.+++.++.+.....
T Consensus 49 ~E~~~Vl~G~~~~~~---~~~~---~~~l~~Gd~~~ip---~~~~--H~~~~~~~~~~l~i~~~~~ 103 (107)
T 2i45_A 49 DKVLFAVEGDMAVDF---ADGG---SMTIREGEMAVVP---KSVS--HRPRSENGCSLVLIELSDP 103 (107)
T ss_dssp CEEEEESSSCEEEEE---TTSC---EEEECTTEEEEEC---TTCC--EEEEEEEEEEEEEEECC--
T ss_pred CEEEEEEeCEEEEEE---CCCc---EEEECCCCEEEEC---CCCc--EeeEeCCCeEEEEEECCCc
Confidence 788999999999875 22 3 3578888865221 2222 3333345667776665443
No 232
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=27.07 E-value=1.4e+02 Score=22.90 Aligned_cols=29 Identities=21% Similarity=0.349 Sum_probs=22.1
Q ss_pred cCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 79 IDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 79 ~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
.+.+++|++|.+.+.. +|+ ...+.+||.+
T Consensus 84 ~eE~~yVLeG~~~l~i---~g~---~~~l~~GD~i 112 (151)
T 4axo_A 84 YDEIDYVIDGTLDIII---DGR---KVSASSGELI 112 (151)
T ss_dssp SEEEEEEEEEEEEEEE---TTE---EEEEETTCEE
T ss_pred CcEEEEEEEeEEEEEE---CCE---EEEEcCCCEE
Confidence 5577889999999985 443 3578899865
No 233
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=25.90 E-value=58 Score=30.04 Aligned_cols=51 Identities=20% Similarity=0.208 Sum_probs=36.8
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
+....++||..+-..-...+.+++|++|...+...+.+ +. ....+++||++
T Consensus 51 ~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~-~~-~~~~l~~GDv~ 101 (416)
T 1uij_A 51 IVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNND-DR-DSYNLHPGDAQ 101 (416)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESCEEEEEECSS-CE-EEEEECTTEEE
T ss_pred EEEEEeccCcCcccccCCCceEEEEEeeEEEEEEEECC-CC-eEEEecCCCEE
Confidence 34677888886655544567899999999999876553 32 25688999976
No 234
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=25.83 E-value=1.6e+02 Score=23.44 Aligned_cols=105 Identities=15% Similarity=0.103 Sum_probs=55.2
Q ss_pred hhhHHHhhccCCHHHHHHHHHcCCCccccCCCCCcHH-HHHHHcCcHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCCh
Q 015680 191 ALRFNSAAYHGDLYQLKGLIRAGADLNKTDYDGRSPL-HLATSRGYEDITLFLIQKGVDINIKDKFGNTPLLEAIKCGHD 269 (403)
Q Consensus 191 ~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L-~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~A~~~~~~ 269 (403)
.+.|-.|...|+++.+.-+.+.- .+..-+.-| ..|...|++++++...++--|.. ..+.+....|+.
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-------~L~~Ly~~tg~~ 76 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFD-------KLSFLYLVTGDV 76 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHHHTCH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-------HHHHHHHHhCCH
Confidence 34577888889888887776542 111122223 45667788888888777643332 244444556666
Q ss_pred HHHHHHHHcCCCccccCCCchHHHHHHcCCH-HHHHHHHHC
Q 015680 270 GVTSLLVKEGASLNVDDAGSFLCIAVARGDS-DLLKRVLSN 309 (403)
Q Consensus 270 ~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~-~~v~~Ll~~ 309 (403)
+-++.|.+.-. ...+.+...+.+-..|++ +++++|.+.
T Consensus 77 e~L~kla~iA~--~~g~~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 77 NKLSKMQNIAQ--TREDFGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHHHH--HTTCHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHH--HCccHHHHHHHHHHcCCHHHHHHHHHHC
Confidence 65555533200 001112334455555554 345555443
No 235
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=25.65 E-value=71 Score=23.22 Aligned_cols=80 Identities=13% Similarity=-0.075 Sum_probs=44.5
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEe--ccce--ee
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRIC--ELSR--LL 137 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~--~~~~--~~ 137 (403)
....+++|...-..-.....+++|++|.+.+.. +|+ ...+.+|+++--.+ +.+ ...... ++++ ++
T Consensus 37 ~~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~i---~~~---~~~l~~Gd~~~i~~---~~~--H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 37 AWCIVRPETKSFRHSHNEYELFIVIQGNAIIRI---NDE---DFPVTKGDLIIIPL---DSE--HHVINNNQEDFHFYTI 105 (128)
T ss_dssp EEEEECTTEECCCBCCSSEEEEEEEESEEEEEE---TTE---EEEEETTCEEEECT---TCC--EEEEECSSSCEEEEEE
T ss_pred EEEEECCCCccCCEecCCeEEEEEEeCEEEEEE---CCE---EEEECCCcEEEECC---CCc--EEeEeCCCCCEEEEEE
Confidence 345666776443333445688999999999886 333 35778888652211 222 223332 2333 34
Q ss_pred eechHhHHHHHHHHh
Q 015680 138 RIDKQSFTSILEIYF 152 (403)
Q Consensus 138 ~i~~~~~~~l~~~~~ 152 (403)
.++.+.+..++....
T Consensus 106 ~f~~~~~~~~~~~~~ 120 (128)
T 4i4a_A 106 WWDKESTLNFLTRLE 120 (128)
T ss_dssp EECHHHHHHHHHHHH
T ss_pred EECHHHHHHHHHhcc
Confidence 566666666555443
No 236
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=25.47 E-value=64 Score=29.55 Aligned_cols=50 Identities=20% Similarity=0.084 Sum_probs=38.5
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCc
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSS 112 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~ 112 (403)
+....+++|-.+...-...+.+++|++|+..+...+.++++ ...+++||+
T Consensus 54 ~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~--~~~l~~GDv 103 (397)
T 2phl_A 54 LVEFRSKPETLLLPQQADAELLLVVRSGSAILVLVKPDDRR--EYFFLTSDN 103 (397)
T ss_dssp EEEEEECSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEE--EEEEEESSC
T ss_pred EEEEEECCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcE--EEEECCCCc
Confidence 34667788877655445677899999999999987766554 578999998
No 237
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES; 1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A 2l3t_A 3gxw_A 3gxx_A
Probab=25.42 E-value=88 Score=25.40 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=29.1
Q ss_pred cCCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCcc-CeEE
Q 015680 43 VSLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVI-DQLY 83 (403)
Q Consensus 43 ~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~-~~~~ 83 (403)
.|.|.+++..+..++++. -+.||+|+++...+ +++.
T Consensus 8 HP~F~n~~~~qAe~~L~~-----~~~Ge~iIRPSSkg~dhLt 44 (197)
T 3or8_A 8 HPYYFPFNGKQAEDYLRS-----KERGDFVIRQSSRGDDHLA 44 (197)
T ss_dssp CTTEECCCHHHHHHHHTT-----SCTTCEEEEECSSCTTEEE
T ss_pred CCCcCCCCHHHHHHHHhc-----CCCCCEEEeeCCCCCCcEE
Confidence 599999999998887764 36899999999985 4543
No 238
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=25.10 E-value=41 Score=25.65 Aligned_cols=51 Identities=14% Similarity=-0.005 Sum_probs=35.3
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccc
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGE 115 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~ 115 (403)
+...++++|..+-....+....++|++|..... .|....-..+++|+++-.
T Consensus 46 ~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~----~g~~~~~~~~~~Gd~~~~ 96 (145)
T 2o1q_A 46 TAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVR----GGKAAGGDTAIAPGYGYE 96 (145)
T ss_dssp EEEEEECTTEEECCEEESSCEEEEEEEEEEEET----TCGGGTSEEEESSEEEEE
T ss_pred EEEEEECCCCCCCccCCCCCEEEEEEEeEEEEc----CCCEecceEeCCCEEEEE
Confidence 567889999988777777778899999999842 333221245567775543
No 239
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=24.38 E-value=59 Score=29.70 Aligned_cols=75 Identities=12% Similarity=0.047 Sum_probs=45.2
Q ss_pred heeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEE---eccceeee
Q 015680 62 HEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRI---CELSRLLR 138 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a---~~~~~~~~ 138 (403)
....+++|+..-..-.....+|+|++|...+.. +|+ ...+++||+|-.-.- . ...... .+++.++.
T Consensus 297 ~~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~V---~ge---~~~~~~GD~~~iP~g---~--~H~~~N~g~~e~~~ll~ 365 (394)
T 3bu7_A 297 SMQMLRPGEHTKAHRHTGNVIYNVAKGQGYSIV---GGK---RFDWSEHDIFCVPAW---T--WHEHCNTQERDDACLFS 365 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECCEEEEE---TTE---EEEECTTCEEEECTT---C--CEEEEECCSSCCEEEEE
T ss_pred EEEEECCCCcCCCcccCCcEEEEEEeCeEEEEE---CCE---EEEEeCCCEEEECCC---C--eEEeEeCCCCCCeEEEE
Confidence 345667777665555566679999999986654 443 357789987743221 1 122222 24566777
Q ss_pred echHhHHHH
Q 015680 139 IDKQSFTSI 147 (403)
Q Consensus 139 i~~~~~~~l 147 (403)
+....+.+.
T Consensus 366 i~D~Pl~~~ 374 (394)
T 3bu7_A 366 FNDFPVMEK 374 (394)
T ss_dssp EESHHHHHH
T ss_pred eeCHHHHHH
Confidence 766655543
No 240
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=24.18 E-value=1.9e+02 Score=25.77 Aligned_cols=73 Identities=10% Similarity=0.072 Sum_probs=43.9
Q ss_pred eeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechH
Q 015680 63 EEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQ 142 (403)
Q Consensus 63 ~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~ 142 (403)
...+++|...-..-.+...+|+|++|..++.. +| ....+.+||+|-.-.. ....+.+.++..++++...
T Consensus 272 ~~~l~pG~~~~~H~h~~~ev~~v~~G~g~~~v---~~---~~~~~~~GD~~~vP~~-----~~H~~~n~e~~~l~~~~d~ 340 (354)
T 2d40_A 272 LQLLPKGFASRVARTTDSTIYHVVEGSGQVII---GN---ETFSFSAKDIFVVPTW-----HGVSFQTTQDSVLFSFSDR 340 (354)
T ss_dssp EEEECTTCBCCCBEESSCEEEEEEEEEEEEEE---TT---EEEEEETTCEEEECTT-----CCEEEEEEEEEEEEEEESH
T ss_pred EEEECCCCCCCceecCCcEEEEEEeCeEEEEE---CC---EEEEEcCCCEEEECCC-----CeEEEEeCCCEEEEEEcCH
Confidence 33455555433333355679999999999886 33 2367889997754331 1233344467777777655
Q ss_pred hHHH
Q 015680 143 SFTS 146 (403)
Q Consensus 143 ~~~~ 146 (403)
.+.+
T Consensus 341 p~~~ 344 (354)
T 2d40_A 341 PVQE 344 (354)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 241
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=24.12 E-value=70 Score=29.68 Aligned_cols=51 Identities=18% Similarity=0.105 Sum_probs=37.4
Q ss_pred hheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 61 LHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 61 ~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
+....++||..+-..-...+.+++|++|...+...+.++ .....+++||++
T Consensus 63 ~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~--~~~~~l~~GDv~ 113 (434)
T 2ea7_A 63 VVEFKSKPNTLLLPHHADADFLLVVLNGTAVLTLVNPDS--RDSYILEQGHAQ 113 (434)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESEEEEEEECSSC--EEEEEEETTEEE
T ss_pred EEEEEecCCcCccCccCCCceEEEEEecEEEEEEEeCCC--CEEEEeCCCCEE
Confidence 356788888877666444678999999999998765433 235688899976
No 242
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=23.98 E-value=65 Score=24.77 Aligned_cols=46 Identities=13% Similarity=0.111 Sum_probs=29.7
Q ss_pred heeeeCCCCe-E-EecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEV-I-MEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~-i-~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|.. . ...-...+.+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 49 ~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~~---~~~l~~Gd~i 96 (162)
T 3l2h_A 49 HLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---END---QYPIAPGDFV 96 (162)
T ss_dssp EEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TTE---EEEECTTCEE
T ss_pred EEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CCE---EEEeCCCCEE
Confidence 3456777763 2 1111245688999999999985 333 3578888865
No 243
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=23.85 E-value=82 Score=27.09 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=35.8
Q ss_pred HHhheeeeCCCCeEEe-cCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 59 IRLHEEFFLPGEVIME-QGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 59 ~~~~~~~~~~ge~i~~-~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
-.+...++++|..+-. +-...++.++|++|+..+.. +|+. ..+++||++
T Consensus 191 ~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~---~~~~---~~v~~GD~~ 240 (278)
T 1sq4_A 191 MHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRL---NQDW---VEVEAGDFM 240 (278)
T ss_dssp EEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEE---TTEE---EEEETTCEE
T ss_pred eEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEE---CCEE---EEeCCCCEE
Confidence 3456788999998864 44555688999999998874 4433 577888865
No 244
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=23.71 E-value=1.1e+02 Score=21.18 Aligned_cols=47 Identities=21% Similarity=0.214 Sum_probs=30.2
Q ss_pred heeeeCCCCeEEecCCcc-CeE-EEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVI-DQL-YFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~-~~~-~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-..-... ..+ ++|++|.+.+.. .+|+ ...+.+|+++
T Consensus 36 ~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~--~~~~---~~~l~~Gd~~ 84 (110)
T 2q30_A 36 VSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG--DGDA---VIPAPRGAVL 84 (110)
T ss_dssp EEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC--GGGC---EEEECTTEEE
T ss_pred EEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe--CCCE---EEEECCCCEE
Confidence 445678888765443333 455 799999999875 1123 3567888855
No 245
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=23.68 E-value=79 Score=27.05 Aligned_cols=46 Identities=15% Similarity=0.065 Sum_probs=32.8
Q ss_pred heeeeCCCCeEEe-cCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIME-QGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~-~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|..+-. .-...+.+++|++|.+.+.. +|+ ...+++||++
T Consensus 185 ~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~i---~~~---~~~l~~GD~i 231 (274)
T 1sef_A 185 HILSFEPGASHAYIETHVQEHGAYLISGQGMYNL---DNE---WYPVEKGDYI 231 (274)
T ss_dssp EEEEECTTCBCSSCBCCSCCEEEEEEECEEEEEE---TTE---EEEEETTCEE
T ss_pred EEEEECCCCccCcceeccCeEEEEEEeCEEEEEE---CCE---EEEECCCCEE
Confidence 4557888876643 33456788999999999986 333 3578899865
No 246
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=23.18 E-value=71 Score=22.86 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=22.3
Q ss_pred ccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 78 VIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 78 ~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
..+.+++|++|.+++.. +|++. ...+++|+.+
T Consensus 52 ~~~E~~~Vl~G~~~l~~---~~~~~-~~~l~~Gd~i 83 (112)
T 2opk_A 52 PQDEWVMVVSGSAGIEC---EGDTA-PRVMRPGDWL 83 (112)
T ss_dssp SSEEEEEEEESCEEEEE---TTCSS-CEEECTTEEE
T ss_pred CccEEEEEEeCeEEEEE---CCEEE-EEEECCCCEE
Confidence 45578999999999976 33321 1468899865
No 247
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=22.96 E-value=69 Score=24.88 Aligned_cols=46 Identities=20% Similarity=0.177 Sum_probs=29.4
Q ss_pred heeeeCCCCeEE--ecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIM--EQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~--~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....+++|.... ..-...+.+++|++|.+.+.. +|+ ...+.+|+++
T Consensus 46 ~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~---~~~---~~~l~~GD~i 93 (163)
T 3i7d_A 46 NLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVD---DQG---EHPMVPGDCA 93 (163)
T ss_dssp EEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEE---TTE---EEEECTTCEE
T ss_pred EEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEE---CCE---EEEeCCCCEE
Confidence 355667776431 222223688999999999986 332 3577888854
No 248
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=22.77 E-value=1e+02 Score=28.98 Aligned_cols=70 Identities=4% Similarity=-0.104 Sum_probs=45.8
Q ss_pred CCCCCCCHHHHHHHHHHhheeeeCCCCeEEecCCccCeEEEEeeeEEEEEeecCCCCe---------------------e
Q 015680 44 SLFKGCSSEFINQIVIRLHEEFFLPGEVIMEQGNVIDQLYFVCHGVLEEVGVGEDGSE---------------------E 102 (403)
Q Consensus 44 ~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~---------------------~ 102 (403)
+.|..-+ ..+...--.+....+.+|-.+...=.....+++|++|...+....+++.+ .
T Consensus 34 e~~~~~~-~~l~~~gvs~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~q 112 (476)
T 1fxz_A 34 ETWNPNN-KPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQ 112 (476)
T ss_dssp EECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCC
T ss_pred EeeCCCC-hhhccCceEEEEEEEcCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccc
Confidence 3354333 33443333445678888887755445577899999999988877665543 1
Q ss_pred EeeeecCCCccc
Q 015680 103 TVSQLQPNSSFG 114 (403)
Q Consensus 103 ~~~~~~~G~~~g 114 (403)
.+..+++||++-
T Consensus 113 k~~~l~~GDvi~ 124 (476)
T 1fxz_A 113 KIYNFREGDLIA 124 (476)
T ss_dssp CEEEECTTEEEE
T ss_pred eEEEEeCCCEEE
Confidence 367899999773
No 249
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=22.22 E-value=34 Score=24.06 Aligned_cols=49 Identities=22% Similarity=0.348 Sum_probs=30.7
Q ss_pred heeeeCCCCeEEecCCccC-eEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 62 HEEFFLPGEVIMEQGNVID-QLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 62 ~~~~~~~ge~i~~~g~~~~-~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
....++||+-+-..-.+.+ -+|+|++|.+++.. .+|.. ....+.+|+.+
T Consensus 20 ~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~-~~~~l~~G~~~ 69 (98)
T 3lag_A 20 TEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTR-SLAQLKTGRSY 69 (98)
T ss_dssp EEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCE-ECCCBCTTCCE
T ss_pred EEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCCce-EEEEecCCcEE
Confidence 3467788887766655554 46778899998863 44443 24456777744
No 250
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=21.45 E-value=1.8e+02 Score=26.63 Aligned_cols=63 Identities=17% Similarity=0.033 Sum_probs=40.9
Q ss_pred HHHHcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCChHHHHHHHcCcHHHHHHHHH
Q 015680 262 EAIKCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLLKRVLSNGVDPNSRDYDHRTPLHVAASEGLYLMAKLLLE 341 (403)
Q Consensus 262 ~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~~Ll~ 341 (403)
..+..|+...|+-.+.+|-+++..-. . + +..+-++.+ . -.-|.|.+|+|+...+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt--~----------~--e~~lln~~~--a-f~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLT--A----------D--EVRLLNRPS--A-FDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCC--H----------H--HHHHHCCTT--T-CCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccC--H----------H--HHHHhCCCc--c-cccCchhhhhhhhhhhhhHHHHhhh
Confidence 44567888889888888877765322 1 1 222222222 1 2238889999999999888888876
No 251
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=20.88 E-value=93 Score=22.50 Aligned_cols=45 Identities=16% Similarity=0.111 Sum_probs=27.3
Q ss_pred eeeeCCCCeEE--ecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcc
Q 015680 63 EEFFLPGEVIM--EQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSF 113 (403)
Q Consensus 63 ~~~~~~ge~i~--~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 113 (403)
...+++|..+- ..-+..+.+|+|++|.+.+.. +|+ ...+.+|+++
T Consensus 30 ~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~~---~~~l~~Gd~i 76 (125)
T 3cew_A 30 INHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DGE---KIELQAGDWL 76 (125)
T ss_dssp EEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TTE---EEEEETTEEE
T ss_pred EEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CCE---EEEeCCCCEE
Confidence 45667776442 222223356779999999876 333 3567888855
No 252
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=20.68 E-value=1.9e+02 Score=24.92 Aligned_cols=67 Identities=9% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCC---eEEecCCccCeEEEEeeeEEEEEeecCCCCeeEeeeecCCCcccccccccCCCcceeEEEeccceeeeechH
Q 015680 68 PGE---VIMEQGNVIDQLYFVCHGVLEEVGVGEDGSEETVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLLRIDKQ 142 (403)
Q Consensus 68 ~ge---~i~~~g~~~~~~~~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~~i~~~ 142 (403)
.|+ ..++ -+..+-+|++++|.+.+...+.+. ..--.+.+|++| +--..-+.+=.+..+|..+.|.+.
T Consensus 38 gGpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~g~--~~~V~i~eGemf-----llP~gv~HsP~r~~et~gLviE~~ 107 (286)
T 2qnk_A 38 GGPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQGK--HRDVVIRQGEIF-----LLPARVPHSPQRFANTVGLVVERR 107 (286)
T ss_dssp CSCBCCCCEE-ECSSCEEEEEEESCEEEEEEETTE--EEEEEECTTEEE-----EECTTCCEEEEECTTCEEEEEEEC
T ss_pred eCCCcCccCc-CCCCCeEEEEEeCeEEEEEEeCCc--eeeEEECCCeEE-----EeCCCCCcCCcccCCeEEEEEeec
No 253
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=20.64 E-value=3.2e+02 Score=21.61 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=84.4
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCCCCcCCCCCC-cHHHHHHHcCChHHHHHHHHcCCCccccCCCchHHHHHHcCCHHHH
Q 015680 225 SPLHLATSRGYEDITLFLIQKGVDINIKDKFGN-TPLLEAIKCGHDGVTSLLVKEGASLNVDDAGSFLCIAVARGDSDLL 303 (403)
Q Consensus 225 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~-t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~~~l~~a~~~~~~~~v 303 (403)
+=+-+|...|+++.+.-+.+.- + +..-+ .-=..|...|+.++++....+--++. ..+.+....|+.+-+
T Consensus 10 ~rF~LAL~lg~l~~A~e~a~~l---~--~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-----~L~~Ly~~tg~~e~L 79 (177)
T 3mkq_B 10 IRFDLALEYGNLDAALDEAKKL---N--DSITWERLIQEALAQGNASLAEMIYQTQHSFD-----KLSFLYLVTGDVNKL 79 (177)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH---C--CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-----HHHHHHHHHTCHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHh---C--CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-----HHHHHHHHhCCHHHH
Confidence 5677899999998776665531 1 11122 23345778899999988777633332 456777778888777
Q ss_pred HHHHHCCCCCCCCCCCCChHHHHHHHcCcH-HHHHHHHHcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 015680 304 KRVLSNGVDPNSRDYDHRTPLHVAASEGLY-LMAKLLLEAGASVFTKDRWGNTPLDEGRMCGNKNLIKLLEDA 375 (403)
Q Consensus 304 ~~Ll~~~~~~~~~~~~g~t~Lh~A~~~~~~-~~~~~Ll~~g~d~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 375 (403)
+.|.+.- ....+-+.+++.+-..|++ +++++|.+.|--+ -+.-.|.-+|..++.+-+++.
T Consensus 80 ~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 80 SKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHHH
Confidence 7665321 1122345678888888875 5788887765322 267788889999999977654
No 254
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=20.52 E-value=1.8e+02 Score=21.62 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=30.0
Q ss_pred eEEEEeeeEEEEEeecCCCC-ee-EeeeecCCCcccccccccCCCcceeEEEeccceee
Q 015680 81 QLYFVCHGVLEEVGVGEDGS-EE-TVSQLQPNSSFGEVSILCNIPQPYTVRICELSRLL 137 (403)
Q Consensus 81 ~~~~v~~G~v~~~~~~~~g~-~~-~~~~~~~G~~~g~~~ll~~~~~~~~~~a~~~~~~~ 137 (403)
..+.|++|.++.+..+++|. +. ...+..+|+. +.+ .-.....++++++...+
T Consensus 41 g~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~-~~i----~Pq~wH~Ve~lsdd~~f 94 (127)
T 3bb6_A 41 PRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQF-AVF----PPEKWHNIEAMTDDTYF 94 (127)
T ss_dssp EEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBE-EEC----CSSCEEEEEESSTTCEE
T ss_pred EEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCc-eEE----CCCCcEEEEEcCCCEEE
Confidence 45889999999998787776 32 2233344442 222 22345667765554333
Done!