Query 015683
Match_columns 402
No_of_seqs 306 out of 1252
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 16:52:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015683.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015683hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 1.6E-25 5.4E-30 217.7 14.9 193 131-350 11-215 (280)
2 1xhb_A Polypeptide N-acetylgal 93.7 2.3 7.9E-05 42.5 17.1 166 172-344 62-252 (472)
3 2d7i_A Polypeptide N-acetylgal 92.5 4.1 0.00014 42.2 17.2 159 173-338 146-324 (570)
4 2ffu_A Ppgalnact-2, polypeptid 89.4 11 0.00037 38.1 16.5 161 172-343 99-283 (501)
5 4fix_A UDP-galactofuranosyl tr 87.0 20 0.0007 38.0 17.3 123 220-344 258-411 (657)
6 3bcv_A Putative glycosyltransf 84.6 19 0.00065 31.5 13.5 166 171-345 34-220 (240)
7 1qg8_A Protein (spore coat pol 84.0 22 0.00076 31.4 18.2 160 171-344 30-208 (255)
8 2z86_A Chondroitin synthase; G 72.1 92 0.0031 31.9 16.6 128 220-347 164-327 (625)
9 4hg6_A Cellulose synthase subu 70.8 91 0.0031 33.6 16.0 131 216-350 225-368 (802)
10 2z86_A Chondroitin synthase; G 60.5 78 0.0027 32.4 12.5 156 171-344 404-566 (625)
11 2c0n_A A197; thermophil protei 38.9 1.7E+02 0.0058 26.5 9.4 132 191-335 16-159 (203)
12 2lnd_A De novo designed protei 32.1 83 0.0029 24.6 5.4 71 139-227 31-104 (112)
13 2bo4_A Mannosylglycerate synth 30.4 1.4E+02 0.0049 29.4 8.3 167 171-342 28-209 (397)
14 3ckj_A Putative uncharacterize 27.2 31 0.0011 32.6 2.7 108 222-334 123-244 (329)
15 1fo8_A Alpha-1,3-mannosyl-glyc 21.4 1.6E+02 0.0055 28.5 6.6 86 220-315 89-179 (343)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.93 E-value=1.6e-25 Score=217.72 Aligned_cols=193 Identities=18% Similarity=0.181 Sum_probs=131.2
Q ss_pred CCeEEEEEEECCCC-CHHHHHHHHHhhccCchhhhhhhccCceEEEEEeecCCCCchhhHHhhHHHHhhCCCEEEeccc-
Q 015683 131 PKVFVVIGINTAFS-SRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHI- 208 (402)
Q Consensus 131 ~~~~llI~V~S~p~-~~~rR~aIR~TW~~~~~~l~~l~~~~~i~~~FvlG~s~~~~~~~~~~I~~E~~~~~DIL~ldf~- 208 (402)
..-.|+|+|+|+++ +.+|+++||+||++.... . .||.+... +..+. .. ..++++..++.
T Consensus 11 ~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-------~----~fifsd~~--d~~l~----~~--~~~~~~~~~~~~ 71 (280)
T 2j0a_A 11 QLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-------Q----TFIFTDSP--DERLQ----ER--LGPHLVVTQCSA 71 (280)
T ss_dssp CGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-------G----EEEEESSC--CHHHH----HH--HGGGEEECCC--
T ss_pred CcccEEEEEECcHHHHHHHHHHHHHHHhccCCC-------c----eEEEcCCC--ccccc----cc--ccccceeccccc
Confidence 34578899999998 557999999999987631 1 23333322 22222 11 24578887764
Q ss_pred -ccCCCchhHHHHHHHHHHhcCCceEEEEecCceEecHHHHHHHHhhcCCCCCeEEEEeecCcccccCCCccccCCcccc
Q 015683 209 -EGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKPRVYIGCMKSGPVLSQKNVKYHEPEYWKF 287 (402)
Q Consensus 209 -Dsy~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~~L~~~~~~~~lY~G~~~~~pv~rd~~~Kwyvp~~w~f 287 (402)
+++.+++.|+...+++.. +.+++|++|+|||+|||+++|+++|..+++.+++|+|......+++ .+++.|.+
T Consensus 72 ~~~~~~l~~K~~~~~~~~l-~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~---~~~~~~~~--- 144 (280)
T 2j0a_A 72 EHSHPALSCKMAAEFDAFL-VSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIH---ASELQSKQ--- 144 (280)
T ss_dssp -----CCCHHHHHHHHHHH-HHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------
T ss_pred cccccchHHHHHHHHHHHh-CCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCcccc---ccccCccc---
Confidence 467889999999998764 3699999999999999999999999999999999999876433333 13455532
Q ss_pred CCCCCcccccc-CCCeeeeCHHHHHHHHHhCCCc-------CCCCcChHHHHHHHh-cCCCeeecCCCceec
Q 015683 288 GEEGNKYFRHA-TGQIYAISKDLATYISINQPIL-------HKFANEDVSLGSWFI-GLEVEHIDDRNMCCQ 350 (402)
Q Consensus 288 ~y~~~~Yp~Y~-~G~gYvLS~dla~~I~~~~~~l-------~~~~~EDV~vG~~l~-~L~v~~~d~~~F~~~ 350 (402)
.++...| +|| +|+|||||++++++|+...... .....||+++|+|+. .+||.+.++.+|...
T Consensus 145 ~~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~ 215 (280)
T 2j0a_A 145 RTKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSH 215 (280)
T ss_dssp ------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCS
T ss_pred ccccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCC
Confidence 1122245 466 5789999999999999743221 233479999999998 999999999999754
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=93.74 E-value=2.3 Score=42.54 Aligned_cols=166 Identities=13% Similarity=0.094 Sum_probs=87.0
Q ss_pred eEEEEEeecCCCCchhhHHhhHHHHhhCC-CEEEecccccCCCchhHHHHHHHHHHhcCCceEEEEecCceEecHHHHHH
Q 015683 172 IIIRFMIGHSATSNSILDKAIDSEDAQHK-DFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250 (402)
Q Consensus 172 i~~~FvlG~s~~~~~~~~~~I~~E~~~~~-DIL~ldf~Dsy~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~ 250 (402)
..++.|-..|. ++...+.+++-.+.+. .+..+...++ .- ...+...+.+....+|++..|+|+.+..+-|..
T Consensus 62 ~EIIvVDd~S~--d~~t~~~l~~~~~~~~~~v~vi~~~~n---~G--~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 62 EEIVLVDDASE--RDFLKRPLESYVKKLKVPVHVIRMEQR---SG--LIRARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEEECSCC--CGGGTHHHHHHHHSSSSCEEEEECSSC---CC--HHHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred eEEEEEECCCC--cHHHHHHHHHHHHHCCCcEEEEECCCC---CC--hHHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 35666654443 2223344554445666 4554444332 22 223444455556789999999999999887777
Q ss_pred HHhhcCCCCC-eEEEEee--cC-cccccCC-------CccccCCcccc--------C--C-CCCccccccCCCeeeeCHH
Q 015683 251 TLSRHRSKPR-VYIGCMK--SG-PVLSQKN-------VKYHEPEYWKF--------G--E-EGNKYFRHATGQIYAISKD 308 (402)
Q Consensus 251 ~L~~~~~~~~-lY~G~~~--~~-pv~rd~~-------~Kwyvp~~w~f--------~--y-~~~~Yp~Y~~G~gYvLS~d 308 (402)
++......+. +..|.+. .. ....... -.|.....|.. . . ......+++.|++++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 7766543333 3333321 11 1000000 01111100100 0 0 0122345788999999999
Q ss_pred HHHHHHHhCCCcCCCCcChHHHHHHHh--cCCCeeecC
Q 015683 309 LATYISINQPILHKFANEDVSLGSWFI--GLEVEHIDD 344 (402)
Q Consensus 309 la~~I~~~~~~l~~~~~EDV~vG~~l~--~L~v~~~d~ 344 (402)
+...+---...+..+..||+-++.-+. |..+..++.
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~ 252 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTC 252 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEE
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccC
Confidence 998875433444455589998886554 444444433
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=92.45 E-value=4.1 Score=42.24 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=83.3
Q ss_pred EEEEEeecCCCCchhhHHhhHHHHhhCCCEEEecccccCCCchhHHHHHHHHHHhcCCceEEEEecCceEecHHHHHHHH
Q 015683 173 IIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTL 252 (402)
Q Consensus 173 ~~~FvlG~s~~~~~~~~~~I~~E~~~~~DIL~ldf~Dsy~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~~L 252 (402)
.++.|-..|. +.++.+.+++..+.+..|..+...+. ..+ ..+...+.+....+|++..|+|+.+..+-|..++
T Consensus 146 EIIVVDDgS~--D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~----~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll 218 (570)
T 2d7i_A 146 EIVLVDDFSD--REHLKKPLEDYMALFPSVRILRTKKR-EGL----IRTRMLGASVATGDVITFLDSHCEANVNWLPPLL 218 (570)
T ss_dssp EEEEEECSCC--CGGGTHHHHHHHTTSTTEEEEECSSC-CCH----HHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHH
T ss_pred EEEEEECCCC--cHHHHHHHHHHHHhCCeEEEEECCCC-CCH----HHHHHHHHHhcCCCEEEEEcCCccccccHHHHHH
Confidence 4666655443 33434455555566666655543322 122 2334444444578999999999999987766666
Q ss_pred hhcCCCCCeEEEEee---cCcc--cccC-CCccccCCccccCC--------------CCCccccccCCCeeeeCHHHHHH
Q 015683 253 SRHRSKPRVYIGCMK---SGPV--LSQK-NVKYHEPEYWKFGE--------------EGNKYFRHATGQIYAISKDLATY 312 (402)
Q Consensus 253 ~~~~~~~~lY~G~~~---~~pv--~rd~-~~Kwyvp~~w~f~y--------------~~~~Yp~Y~~G~gYvLS~dla~~ 312 (402)
......+.+.+|... .+.. .+.. .......-.|.+.+ ......+++.|+++++++++...
T Consensus 219 ~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~ 298 (570)
T 2d7i_A 219 DRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE 298 (570)
T ss_dssp HHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHH
T ss_pred HHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHh
Confidence 654333444444321 1110 0000 00000000011100 01122356789999999999988
Q ss_pred HHHhCCCcCCCCcChHHHHHHHhcCC
Q 015683 313 ISINQPILHKFANEDVSLGSWFIGLE 338 (402)
Q Consensus 313 I~~~~~~l~~~~~EDV~vG~~l~~L~ 338 (402)
+---...+..+..||+-+..-+...|
T Consensus 299 iGgfDe~~~~~g~ED~dl~~Rl~~~G 324 (570)
T 2d7i_A 299 LGGYDPGLEIWGGEQYEISFKVWMCG 324 (570)
T ss_dssp TTSSCTTCCSSSSHHHHHHHHHHHTT
T ss_pred cCCCCCcccccCcchHHHHHHHHhCC
Confidence 75433444444579999886654443
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=89.43 E-value=11 Score=38.07 Aligned_cols=161 Identities=10% Similarity=0.037 Sum_probs=83.9
Q ss_pred eEEEEEeecCCCCchhhHHhhHHHHhhCCCEEEecccccCCCchhHHHHHHHHHHhcCCceEEEEecCceEecHHHHHHH
Q 015683 172 IIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATT 251 (402)
Q Consensus 172 i~~~FvlG~s~~~~~~~~~~I~~E~~~~~DIL~ldf~Dsy~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~~ 251 (402)
..+++|-..|. ++++... .+.+..+..+...+ |.- ...++..+.+....+|++..|+|..+..+-|..+
T Consensus 99 ~EIIvVDDgS~--D~t~~~~----~~~~~~v~vi~~~~---n~G--~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~l 167 (501)
T 2ffu_A 99 KEIILVDDYSN--DPEDGAL----LGKIEKVRVLRNDR---REG--LMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPL 167 (501)
T ss_dssp EEEEEEECSCS--CTHHHHG----GGGBTTEEEEECSS---CCH--HHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHH
T ss_pred eeEEEEECCCC--chHHHHH----HhcCCCEEEEECCC---CcC--HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHH
Confidence 35666665554 3333222 23455555444322 322 2334455555568899999999999998777777
Q ss_pred HhhcCCCCCeEEE-Eee--cCcccc--c--C----CCccccCCcccc-----------CCCCCccccccCCCeeeeCHHH
Q 015683 252 LSRHRSKPRVYIG-CMK--SGPVLS--Q--K----NVKYHEPEYWKF-----------GEEGNKYFRHATGQIYAISKDL 309 (402)
Q Consensus 252 L~~~~~~~~lY~G-~~~--~~pv~r--d--~----~~Kwyvp~~w~f-----------~y~~~~Yp~Y~~G~gYvLS~dl 309 (402)
+......+...++ .+. ...... . . .-.|.....|.. ........+++.|++.++++++
T Consensus 168 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~ 247 (501)
T 2ffu_A 168 LERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFY 247 (501)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHH
T ss_pred HHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHHhhccCCCCCcccCccccceEEEEEHHH
Confidence 7665433333333 221 110000 0 0 000110000000 0001123456889999999999
Q ss_pred HHHHHHhCCCcCCCCcChHHHHHHHh--cCCCeeec
Q 015683 310 ATYISINQPILHKFANEDVSLGSWFI--GLEVEHID 343 (402)
Q Consensus 310 a~~I~~~~~~l~~~~~EDV~vG~~l~--~L~v~~~d 343 (402)
...+-.-...+..+..||+-+..-+. |..+..+.
T Consensus 248 ~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 248 FEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp HHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhCCCCccccccCcchHHHHHHHHhcCCeEEEcc
Confidence 98885433444455589999876554 44454443
No 5
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=87.00 E-value=20 Score=37.97 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=68.2
Q ss_pred HHHHHHHhcCCceEEEEecCceEecHHHHHHHHhhcC--CCCCeEEEEee--cCcccccCCCcccc---------CCc-c
Q 015683 220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHR--SKPRVYIGCMK--SGPVLSQKNVKYHE---------PEY-W 285 (402)
Q Consensus 220 ~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~~L~~~~--~~~~lY~G~~~--~~pv~rd~~~Kwyv---------p~~-w 285 (402)
.+++.|....+++|++..|||+.+..+.|..++.... +...+..|.+. ..+-.-...+.+.. |.. +
T Consensus 258 ~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 337 (657)
T 4fix_A 258 RVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEY 337 (657)
T ss_dssp HHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCS
T ss_pred HHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccc
Confidence 3566665545789999999999999887777766543 22334444443 11100000000100 000 0
Q ss_pred --cc-------------CCCCCccccccCCCeeeeCHHHHHHHHHhCCCcCCCCcChHHHHHHHhcCC--CeeecC
Q 015683 286 --KF-------------GEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLE--VEHIDD 344 (402)
Q Consensus 286 --~f-------------~y~~~~Yp~Y~~G~gYvLS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~L~--v~~~d~ 344 (402)
.| .+.......|++|.+.++.+++.+.+---.. -.+..||+-++.-+...| +..+++
T Consensus 338 ~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~~~p~ 411 (657)
T 4fix_A 338 DHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTVTLPG 411 (657)
T ss_dssp CEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEEEECC
Confidence 00 0011223458899999999999998743221 123469999998775444 444433
No 6
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=84.61 E-value=19 Score=31.48 Aligned_cols=166 Identities=13% Similarity=0.067 Sum_probs=80.5
Q ss_pred ceEEEEEeecCCCCchhhHHhhHHHHhhCCCEEEecccccCCCchhHHHHHHHHHHhcCCceEEEEecCceEecHHHHHH
Q 015683 171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250 (402)
Q Consensus 171 ~i~~~FvlG~s~~~~~~~~~~I~~E~~~~~DIL~ldf~Dsy~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~ 250 (402)
.+.++.|-..+. +. ..+.+++-.+++..+..+. .+ |.. .-.....+.+....+|++..|+|.++..+.|..
T Consensus 34 ~~eiIvvDd~S~--d~-t~~~~~~~~~~~~~i~~i~-~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~ 104 (240)
T 3bcv_A 34 DIEIILIDDESP--DN-CPKICDDYAAQYPNIKVIH-KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMT 104 (240)
T ss_dssp SEEEEEEECCCS--SS-HHHHHHHHHHHCSSEEEEE-CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHH
T ss_pred CeEEEEEECCCC--cC-HHHHHHHHHhhCCCEEEEE-CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHH
Confidence 456666665553 22 2334444445566665553 22 322 233445555556889999999999999887777
Q ss_pred HHhhcCC-CCCeEEEEee----cCc----cccc-CCCccccCCcc-----ccCCCCCcc---c-cccCCCeeeeCHHHHH
Q 015683 251 TLSRHRS-KPRVYIGCMK----SGP----VLSQ-KNVKYHEPEYW-----KFGEEGNKY---F-RHATGQIYAISKDLAT 311 (402)
Q Consensus 251 ~L~~~~~-~~~lY~G~~~----~~p----v~rd-~~~Kwyvp~~w-----~f~y~~~~Y---p-~Y~~G~gYvLS~dla~ 311 (402)
.+..... ...+.+|... .+. .... ....++....+ .+......+ + ...+|++.++.+++++
T Consensus 105 l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 184 (240)
T 3bcv_A 105 MYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIE 184 (240)
T ss_dssp HHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHH
T ss_pred HHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHHH
Confidence 6665432 3445444321 111 1000 00011111000 000000000 0 0145788999999998
Q ss_pred HHHHhCCCcCCCCcChHHHHHHHhcC--CCeeecCC
Q 015683 312 YISINQPILHKFANEDVSLGSWFIGL--EVEHIDDR 345 (402)
Q Consensus 312 ~I~~~~~~l~~~~~EDV~vG~~l~~L--~v~~~d~~ 345 (402)
.+-.....-..+..||..+..-+... .+..+++.
T Consensus 185 ~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 185 KKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp HTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred HcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence 85311111112346999998766444 45555544
No 7
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=83.96 E-value=22 Score=31.42 Aligned_cols=160 Identities=7% Similarity=-0.074 Sum_probs=86.2
Q ss_pred ceEEEEEeecCCCCchhhHHhhHHHHhhCCCEEEecccccC-----CCchhHHHHHHHHHHhcCCceEEEEecCceEecH
Q 015683 171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGY-----HELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNL 245 (402)
Q Consensus 171 ~i~~~FvlG~s~~~~~~~~~~I~~E~~~~~DIL~ldf~Dsy-----~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl 245 (402)
.+.++.|-..+. +. .. .+.++...+..|..+.....- .|.. .-..+..+.+..+.+|++..|+|.++..
T Consensus 30 ~~eiivvDd~S~--d~-t~-~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G--~~~a~N~gi~~a~g~~i~~lD~Dd~~~~ 103 (255)
T 1qg8_A 30 DFELFIMDDNSN--EE-TL-NVIRPFLNDNRVRFYQSDISGVKERTEKTR--YAALINQAIEMAEGEYITYATDDNIYMP 103 (255)
T ss_dssp CEEEEEEECSCC--HH-HH-HHHGGGGGSTTEEEEECCCCSHHHHHSSCH--HHHHHHHHHHHCCCSEEEEEETTEEECT
T ss_pred ceEEEEEECCCC--ch-HH-HHHHHHhhcCCEEEEecccccccccccccC--HHHHHHHHHHHcCCCEEEEeCCCCccCh
Confidence 456666665553 22 22 233333334555444332100 2322 3345566666678999999999999998
Q ss_pred HHHHHHHhhcC--CCCCeEEEEee----c--CcccccCCCccccCCccccCCCCCccccccCCCeeeeCHHHHHHHH-Hh
Q 015683 246 GMLATTLSRHR--SKPRVYIGCMK----S--GPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYIS-IN 316 (402)
Q Consensus 246 ~~L~~~L~~~~--~~~~lY~G~~~----~--~pv~rd~~~Kwyvp~~w~f~y~~~~Yp~Y~~G~gYvLS~dla~~I~-~~ 316 (402)
+.|...+.... +.-.+..|.+. . +.+. ..+..|.. .+. .....+..|++.++.++++..+- .-
T Consensus 104 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~-~~~---~~~~~~~~~~~~~~rr~~~~~~g~~f 175 (255)
T 1qg8_A 104 DRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAA-QVT---WNAPCAIDHCSVMHRYSVLEKVKEKF 175 (255)
T ss_dssp THHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCC-SCB---SCCTTTSCGGGEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchH-HHH---HhhcCCCccceEEEEHHHHHhhcccc
Confidence 87777666543 33345555432 1 1111 11112221 111 12344578999999999999976 22
Q ss_pred ----CCCcCCCCcChHHHHHHHhcCC-CeeecC
Q 015683 317 ----QPILHKFANEDVSLGSWFIGLE-VEHIDD 344 (402)
Q Consensus 317 ----~~~l~~~~~EDV~vG~~l~~L~-v~~~d~ 344 (402)
.........||..+..-+...+ +..++.
T Consensus 176 ~~~~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~ 208 (255)
T 1qg8_A 176 GSYWDESPAFYRIGDARFFWRVNHFYPFYPLDE 208 (255)
T ss_dssp SSSSCCCGGGSTTHHHHHHHHHTTTCCBEEEEE
T ss_pred cccccCCcccchHHHHHHHHHHHHhCCEEEecC
Confidence 0111234689999887765433 444443
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=72.10 E-value=92 Score=31.88 Aligned_cols=128 Identities=16% Similarity=0.107 Sum_probs=67.7
Q ss_pred HHHHHHHhcCCceEEEEecCceEecHHHHHHHHhhcCCCC-CeEEEEee---cCc--cc---ccC---------------
Q 015683 220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHRSKP-RVYIGCMK---SGP--VL---SQK--------------- 275 (402)
Q Consensus 220 ~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~~L~~~~~~~-~lY~G~~~---~~p--v~---rd~--------------- 275 (402)
..+..+.+..+.+|++..|+|..+..+.|..++......+ ...+|... ... .. ...
T Consensus 164 ~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (625)
T 2z86_A 164 AVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQV 243 (625)
T ss_dssp HHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------
T ss_pred HHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCch
Confidence 3445555556889999999999999887777776553222 23333321 111 00 000
Q ss_pred --------CCccccCCcccc--CCCCCccccccCCCeeeeCHHHHHHHHHhCCCcCCCCcChHHHHHHHhcCC--Ceeec
Q 015683 276 --------NVKYHEPEYWKF--GEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLE--VEHID 343 (402)
Q Consensus 276 --------~~Kwyvp~~w~f--~y~~~~Yp~Y~~G~gYvLS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~L~--v~~~d 343 (402)
...|........ .........++.|++.++++++...+---...+..+..||..++.-+...| +..++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 244 AGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp --------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred hhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcc
Confidence 001100000000 000011123578999999999999874333334444479999987665444 44444
Q ss_pred CCCc
Q 015683 344 DRNM 347 (402)
Q Consensus 344 ~~~F 347 (402)
+...
T Consensus 324 ~~~v 327 (625)
T 2z86_A 324 GAMA 327 (625)
T ss_dssp GGCE
T ss_pred cchh
Confidence 3333
No 9
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=70.84 E-value=91 Score=33.61 Aligned_cols=131 Identities=15% Similarity=0.006 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHhcCCceEEEEecCceEecHHHHHHHHhhcC--CCCCeEEEEee--cCcc-cccCCCccccC-Cccc-cC
Q 015683 216 AKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLATTLSRHR--SKPRVYIGCMK--SGPV-LSQKNVKYHEP-EYWK-FG 288 (402)
Q Consensus 216 ~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~~L~~~~--~~~~lY~G~~~--~~pv-~rd~~~Kwyvp-~~w~-f~ 288 (402)
.|.- .++.+.+..+.+|++..|+|+.+..+.|...+.... ++-.+..|... +..+ .+....-...+ +... +.
T Consensus 225 GKa~-alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (802)
T 4hg6_A 225 AKAG-NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYG 303 (802)
T ss_dssp HHHH-HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHH
T ss_pred cchH-HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHH
Confidence 3443 456666667899999999999999888887776652 32223333221 1111 00000000000 0000 00
Q ss_pred C--CC--CccccccCCCeeeeCHHHHHHHHHhCCCcCCCCcChHHHHHHHhcCC--CeeecCCCceec
Q 015683 289 E--EG--NKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLE--VEHIDDRNMCCQ 350 (402)
Q Consensus 289 y--~~--~~Yp~Y~~G~gYvLS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~L~--v~~~d~~~F~~~ 350 (402)
+ .+ ..-.+++.|++.++.+++.+.+---. .....||..++.-+...| +..+++....+.
T Consensus 304 ~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~ 368 (802)
T 4hg6_A 304 KIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYIDRAMIAGL 368 (802)
T ss_dssp THHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEECCCCCEEEC
T ss_pred HHHhhHhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEecCCEEEec
Confidence 0 00 00113467999999999999873211 122359999998886554 555555554443
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=60.46 E-value=78 Score=32.42 Aligned_cols=156 Identities=12% Similarity=0.046 Sum_probs=79.3
Q ss_pred ceEEEEEeecCCCCchhhHHhhHHHHhhCCCEEEecccccCCCchhHHHHHHHHHHhcCCceEEEEecCceEecHHHHHH
Q 015683 171 GIIIRFMIGHSATSNSILDKAIDSEDAQHKDFLRLEHIEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGMLAT 250 (402)
Q Consensus 171 ~i~~~FvlG~s~~~~~~~~~~I~~E~~~~~DIL~ldf~Dsy~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~~ 250 (402)
.+.++.|-..|. +.+ .+.+.+-.+.+..+..+. . .|.. .-..+..+.+....+|++..|+|.++..+.|..
T Consensus 404 ~~eiivvdd~S~--d~t-~~~~~~~~~~~~~i~~~~-~---~n~G--~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~ 474 (625)
T 2z86_A 404 DLEVCICDDGST--DDT-LRILQEHYANHPRVRFIS-Q---KNKG--IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVEL 474 (625)
T ss_dssp SEEEEEEEESCS--SSH-HHHHHHHHTTCTTEEEEE-E---CCCC--HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHH
T ss_pred CeEEEEEECcCC--hhH-HHHHHHHHhhCCcEEEEe-C---CCCC--HHHHHHHHHHhcCCCEEEEECCCcccChhHHHH
Confidence 456666665554 222 233433344455555443 1 2322 233455555556889999999999999888877
Q ss_pred HHhhcC--CCCCeEEEEee----cCcccccCCCccccCCccccCCCCCccccccCCCeeeeCHHHHHHHHHhCCCcCCCC
Q 015683 251 TLSRHR--SKPRVYIGCMK----SGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFA 324 (402)
Q Consensus 251 ~L~~~~--~~~~lY~G~~~----~~pv~rd~~~Kwyvp~~w~f~y~~~~Yp~Y~~G~gYvLS~dla~~I~~~~~~l~~~~ 324 (402)
.+.... +.-.+..|... .+..+.. .+..+.. . .......++.|.+.++.+++...+-.-... ...
T Consensus 475 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~~~~~~-~---~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~--~~~ 545 (625)
T 2z86_A 475 CLDEFRKDLSLACVYTTNRNIDREGNLISN---GYNWPIY-S---REKLTSAMICHHFRMFTARAWNLTEGFNES--ISN 545 (625)
T ss_dssp HHHHHHHCTTCSEEEEEEEEECTTSCEEEE---CCCCSSC-C---HHHHTTSCCCCSCEEEEHHHHTTTTCCCSS--CSS
T ss_pred HHHHHHhCCCeeEEEeeeEEECCCCCEecc---CcccccC-C---HHHHhhcccCCceEEEEHHHHHHhCCCCCc--cCC
Confidence 765542 22233333221 1222111 0111110 0 000122345678889999876554321122 225
Q ss_pred cChHHHHHHHhcCC-CeeecC
Q 015683 325 NEDVSLGSWFIGLE-VEHIDD 344 (402)
Q Consensus 325 ~EDV~vG~~l~~L~-v~~~d~ 344 (402)
.||.-+..-+...| +.+++.
T Consensus 546 ~eD~dl~~r~~~~g~~~~~~~ 566 (625)
T 2z86_A 546 AVDYDMYLKLSEVGPFKHINK 566 (625)
T ss_dssp CHHHHHHHHHTTTSCEEEEEE
T ss_pred hHHHHHHHHHHHhCCEEEeCC
Confidence 69998877665444 444443
No 11
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=38.88 E-value=1.7e+02 Score=26.52 Aligned_cols=132 Identities=14% Similarity=0.009 Sum_probs=72.5
Q ss_pred hhHHHHhhCCCEEEecccccCCCchhHHH-HHHHHHHhcCCceEEEEecCc---eEecHHHHHHHHhhcCCCCCeEEEEe
Q 015683 191 AIDSEDAQHKDFLRLEHIEGYHELSAKTK-IFFSTAVAKWDADFYVKVDDD---VHVNLGMLATTLSRHRSKPRVYIGCM 266 (402)
Q Consensus 191 ~I~~E~~~~~DIL~ldf~Dsy~nLt~Kt~-~~~~wa~~~~~a~fvlKvDDD---vfVnl~~L~~~L~~~~~~~~lY~G~~ 266 (402)
.|..+..+.|==+++.+.++ +.-... ..+.-.....++++++.+|.| +-.+++.+.++|.. ..++.+|..
T Consensus 16 ~l~~~l~~~gi~~~l~~~~S---lI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsY 89 (203)
T 2c0n_A 16 PLIDFLVKNDIEYVILSRRN---HVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYY 89 (203)
T ss_dssp HHHHHHHHTTCCEEEECCCS---CHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEEC
T ss_pred HHHHHHHhCCCeEEEEcccc---chHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEe
Confidence 34555555443355555533 222111 122222335789999999999 99999999999954 357888874
Q ss_pred --ecCcccccCCCccccCCccccCCCCCccccccCCCeeeeCHHHHHHHHHhCC------CcCCCCcChHHHHHHHh
Q 015683 267 --KSGPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQP------ILHKFANEDVSLGSWFI 335 (402)
Q Consensus 267 --~~~pv~rd~~~Kwyvp~~w~f~y~~~~Yp~Y~~G~gYvLS~dla~~I~~~~~------~l~~~~~EDV~vG~~l~ 335 (402)
++..-.. ...+.|.-.- . ..=-.||+.|.-++++.+.+.|....- ..+..--|||++=.-+.
T Consensus 90 p~K~~~~~s-~~a~~y~~~i---~---~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k 159 (203)
T 2c0n_A 90 YLKTLRGYS-VYRKDWEKEI---F---DGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHK 159 (203)
T ss_dssp BCTTSSSBS-EESSSBCSSC---C---CEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHC
T ss_pred eccCCCccc-hHHHHHHHhc---c---CceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccc
Confidence 2211000 0011121110 0 112347889999999999998855422 12233358888755443
No 12
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.14 E-value=83 Score=24.61 Aligned_cols=71 Identities=25% Similarity=0.339 Sum_probs=43.4
Q ss_pred EECCCCCHHHHHHHHHhhccCchhhhhhhccCceEEEEEeecCCCCchhhHHhhHHHHhhCC---CEEEecccccCCCch
Q 015683 139 INTAFSSRKRRDSVRDTWMPQGEKLIQLEREKGIIIRFMIGHSATSNSILDKAIDSEDAQHK---DFLRLEHIEGYHELS 215 (402)
Q Consensus 139 V~S~p~~~~rR~aIR~TW~~~~~~l~~l~~~~~i~~~FvlG~s~~~~~~~~~~I~~E~~~~~---DIL~ldf~Dsy~nLt 215 (402)
|.|+.++.+-|+.|..-=- +..-.++||-|.+.+. . ...+.|+++-| |++- .-..++||
T Consensus 31 irtatssqdirdiiksmkd-----------ngkplvvfvngasqnd---v-nefqneakkegvsydvlk---stdpeelt 92 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKD-----------NGKPLVVFVNGASQND---V-NEFQNEAKKEGVSYDVLK---STDPEELT 92 (112)
T ss_dssp EEEECSHHHHHHHHHHHTT-----------CCSCEEEEECSCCHHH---H-HHHHHHHHHHTCEEEEEE---CCCHHHHH
T ss_pred eeeccchhhHHHHHHHHHh-----------cCCeEEEEecCccccc---H-HHHHHHHHhcCcchhhhc---cCCHHHHH
Confidence 4566777788888864321 1222578999988532 2 23555665554 3332 22345789
Q ss_pred hHHHHHHHHHHh
Q 015683 216 AKTKIFFSTAVA 227 (402)
Q Consensus 216 ~Kt~~~~~wa~~ 227 (402)
..+..|++.|-.
T Consensus 93 qrvreflktags 104 (112)
T 2lnd_A 93 QRVREFLKTAGS 104 (112)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHhccc
Confidence 999999988754
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=30.39 E-value=1.4e+02 Score=29.44 Aligned_cols=167 Identities=7% Similarity=-0.003 Sum_probs=84.1
Q ss_pred ceEEEEEeecCCCCchhhH--HhhHHHHh-hCCC-EEEecccc-c--CCCchhHHHHHHHHHHhcCCceEEEEecCceE-
Q 015683 171 GIIIRFMIGHSATSNSILD--KAIDSEDA-QHKD-FLRLEHIE-G--YHELSAKTKIFFSTAVAKWDADFYVKVDDDVH- 242 (402)
Q Consensus 171 ~i~~~FvlG~s~~~~~~~~--~~I~~E~~-~~~D-IL~ldf~D-s--y~nLt~Kt~~~~~wa~~~~~a~fvlKvDDDvf- 242 (402)
...+++|-+-|++ .+.+ +.+..+.. .++. ++...... . -.....=...+|+||....+.++++.+|-|.-
T Consensus 28 ~~EIIVVDDGStD--~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~ 105 (397)
T 2bo4_A 28 RVHEVLCIGYERD--QTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITS 105 (397)
T ss_dssp TCCEEEEEESSCC--HHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSS
T ss_pred CeEEEEEECcCCc--cHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCC
Confidence 3468888887763 3322 22222333 3444 33332220 1 12334456678888864457899999999994
Q ss_pred ecHHHHHHHHhhcCCCCCeEEEEeec---CcccccCCCccccCCccccCCCCCccccccCCCeeeeCHHHHHHHHHhC--
Q 015683 243 VNLGMLATTLSRHRSKPRVYIGCMKS---GPVLSQKNVKYHEPEYWKFGEEGNKYFRHATGQIYAISKDLATYISINQ-- 317 (402)
Q Consensus 243 Vnl~~L~~~L~~~~~~~~lY~G~~~~---~pv~rd~~~Kwyvp~~w~f~y~~~~Yp~Y~~G~gYvLS~dla~~I~~~~-- 317 (402)
.++.-+..++......-++.+|.... +........+......+++. .....+...++.+++++++++.+....
T Consensus 106 ~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~--~~~~i~dp~sG~~a~~R~vl~~l~~~~~~ 183 (397)
T 2bo4_A 106 FGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHT--ELSWIEQPLGGELLMRREVAAMLYEDERV 183 (397)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTS--SGGGCSCTTCCCEEEEHHHHHHHHHCHHH
T ss_pred CCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHh--hccccccCCcccEEEeHHHHHHHhhhccc
Confidence 77777777666543334667775321 11111011111000000000 001222335778899999999885311
Q ss_pred CCcCCCCcChHHHHHHH--hcCCCeee
Q 015683 318 PILHKFANEDVSLGSWF--IGLEVEHI 342 (402)
Q Consensus 318 ~~l~~~~~EDV~vG~~l--~~L~v~~~ 342 (402)
.....|. .|+.+-..+ .++.|..+
T Consensus 184 ~~~~~fg-~eiel~~~a~~~G~rI~EV 209 (397)
T 2bo4_A 184 RRRSDWG-IDTLYTFVTVQQGVSIYEC 209 (397)
T ss_dssp HTCCSTT-HHHHHHHHHHHTTCCEEEE
T ss_pred CcCCCcc-hHHHHHHHHHHcCCEEEEE
Confidence 1223333 366665444 35556544
No 14
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=27.21 E-value=31 Score=32.57 Aligned_cols=108 Identities=12% Similarity=0.043 Sum_probs=55.3
Q ss_pred HHHHHhcCCceEEEEecCceE-ecHHHHHHHHhhc--CCCCCeEEEEeec----Cc-c---cccCCCccc---cCCcccc
Q 015683 222 FSTAVAKWDADFYVKVDDDVH-VNLGMLATTLSRH--RSKPRVYIGCMKS----GP-V---LSQKNVKYH---EPEYWKF 287 (402)
Q Consensus 222 ~~wa~~~~~a~fvlKvDDDvf-Vnl~~L~~~L~~~--~~~~~lY~G~~~~----~p-v---~rd~~~Kwy---vp~~w~f 287 (402)
+..+.+..+.+|++..|+|.. +..+.|..++... .+.-.+..|.... +. . .+...++.+ .......
T Consensus 123 ~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (329)
T 3ckj_A 123 LWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAA 202 (329)
T ss_dssp HHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHHHHH
Confidence 344444557899999999999 8877777766653 2344566676421 10 0 011111110 0000000
Q ss_pred CCCCCccccccCCCeeeeCHHHHHHHHHhCCCcCCCCcChHHHHHHH
Q 015683 288 GEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWF 334 (402)
Q Consensus 288 ~y~~~~Yp~Y~~G~gYvLS~dla~~I~~~~~~l~~~~~EDV~vG~~l 334 (402)
.++.-.-..++.|+.+++++++++.+- .-..| .+|..+..-+
T Consensus 203 ~~~~~~~~~~~~~g~~~~rr~~l~~i~----f~~~~-~~D~~l~~r~ 244 (329)
T 3ckj_A 203 LRPELGCILQPLGGEYAATRELLTSVP----FAPGY-GVEIGLLVDT 244 (329)
T ss_dssp HCGGGGGCSCTTCSCEEEEHHHHTTSC----BCCGG-GHHHHHHHHH
T ss_pred hhhhhccccCCCccceeeeHHHHHhCC----CCCCC-cccHHHHHHH
Confidence 000101234567888999999988762 11122 3777665433
No 15
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=21.42 E-value=1.6e+02 Score=28.50 Aligned_cols=86 Identities=15% Similarity=0.177 Sum_probs=47.8
Q ss_pred HHHHHHHhcCCceEEEEecCceEecHHHHH---HHHhhcCCCCCeEEEEeec--CcccccCCCccccCCccccCCCCCcc
Q 015683 220 IFFSTAVAKWDADFYVKVDDDVHVNLGMLA---TTLSRHRSKPRVYIGCMKS--GPVLSQKNVKYHEPEYWKFGEEGNKY 294 (402)
Q Consensus 220 ~~~~wa~~~~~a~fvlKvDDDvfVnl~~L~---~~L~~~~~~~~lY~G~~~~--~pv~rd~~~Kwyvp~~w~f~y~~~~Y 294 (402)
.++.++.+..++++++-+|||..+.++=+- +.|..+...++++ |+.+ .+....... -..+.. + ..
T Consensus 89 ~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~--~ISa~n~~g~~~~~~-~~~~~~----l---yr 158 (343)
T 1fo8_A 89 WALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW--CVSAWNDNGKEQMVD-SSKPEL----L---YR 158 (343)
T ss_dssp HHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE--EEESCCTTCBGGGSC-TTCTTC----E---EE
T ss_pred HHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE--EEecccCcccccccc-ccCcce----E---Ee
Confidence 455555554579999999999999987663 3333334456665 3321 111000000 001111 0 12
Q ss_pred ccccCCCeeeeCHHHHHHHHH
Q 015683 295 FRHATGQIYAISKDLATYISI 315 (402)
Q Consensus 295 p~Y~~G~gYvLS~dla~~I~~ 315 (402)
-.|..|-|+++++++-+.+-.
T Consensus 159 s~~f~~wGWa~wr~~W~e~~~ 179 (343)
T 1fo8_A 159 TDFFPGLGWLLLAELWAELEP 179 (343)
T ss_dssp ESSCCCSSEEEEHHHHHHHGG
T ss_pred ecCCCchhhhhcHHHHHHHhh
Confidence 234568899999999887654
Done!