Query 015684
Match_columns 402
No_of_seqs 327 out of 2096
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 16:53:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015684.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015684hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xmo_A LMO2642 protein; phosph 99.9 5.6E-26 1.9E-30 223.4 23.4 264 32-340 28-320 (443)
2 3ib7_A ICC protein; metallopho 99.9 5.6E-25 1.9E-29 207.6 25.5 235 41-340 23-268 (330)
3 2nxf_A Putative dimetal phosph 99.9 2.1E-24 7.1E-29 202.6 21.1 268 41-361 3-315 (322)
4 3d03_A Phosphohydrolase; glyce 99.9 1.5E-23 5.2E-28 192.4 26.0 232 44-339 1-243 (274)
5 1ute_A Protein (II purple acid 99.9 3.9E-24 1.3E-28 200.1 11.4 271 41-377 4-304 (313)
6 3tgh_A Glideosome-associated p 99.9 2.5E-23 8.6E-28 195.6 11.4 250 42-339 2-282 (342)
7 1xzw_A Purple acid phosphatase 99.9 5.2E-22 1.8E-26 194.0 20.9 261 41-377 124-423 (426)
8 2qfp_A Purple acid phosphatase 99.9 6.1E-21 2.1E-25 186.3 20.1 263 41-379 117-418 (424)
9 1uf3_A Hypothetical protein TT 99.7 1.1E-17 3.8E-22 148.9 13.6 198 43-320 5-208 (228)
10 2yvt_A Hypothetical protein AQ 99.7 2.9E-17 1E-21 149.3 14.8 217 43-339 5-250 (260)
11 2q8u_A Exonuclease, putative; 99.7 5.6E-17 1.9E-21 153.3 14.3 251 40-339 15-267 (336)
12 3av0_A DNA double-strand break 99.7 8.2E-16 2.8E-20 147.9 19.8 227 41-339 18-250 (386)
13 3tho_B Exonuclease, putative; 99.7 2E-15 6.7E-20 144.7 17.6 248 44-340 1-250 (379)
14 3t1i_A Double-strand break rep 99.6 1.6E-14 5.4E-19 138.8 17.4 94 37-139 26-154 (431)
15 1ii7_A MRE11 nuclease; RAD50, 99.6 2E-13 6.7E-18 128.7 21.6 87 44-138 1-89 (333)
16 4fbw_A DNA repair protein RAD3 99.6 4.7E-14 1.6E-18 135.0 17.2 93 38-139 8-135 (417)
17 2yeq_A Apased, PHOD, alkaline 99.6 6.5E-14 2.2E-18 139.3 18.9 213 42-303 115-385 (527)
18 1z2w_A Vacuolar protein sortin 99.6 8.1E-14 2.8E-18 120.7 16.0 58 280-339 107-166 (192)
19 4fbk_A DNA repair and telomere 99.5 1.8E-13 6.1E-18 131.8 17.7 90 41-139 74-198 (472)
20 2a22_A Vacuolar protein sortin 99.5 4.6E-13 1.6E-17 118.0 18.3 59 280-339 131-190 (215)
21 3rl5_A Metallophosphoesterase 99.5 2.6E-13 9E-18 123.9 15.9 68 41-138 57-124 (296)
22 1nnw_A Hypothetical protein; s 99.5 9.6E-15 3.3E-19 132.1 6.0 103 212-338 109-212 (252)
23 3qfm_A SAPH, putative uncharac 99.5 5.3E-14 1.8E-18 128.3 7.4 204 41-339 9-217 (270)
24 1s3l_A Hypothetical protein MJ 99.4 7.4E-12 2.5E-16 107.9 17.3 66 41-137 23-88 (190)
25 3ck2_A Conserved uncharacteriz 99.4 9.1E-12 3.1E-16 106.1 16.7 74 244-339 78-151 (176)
26 1xm7_A Hypothetical protein AQ 99.4 1.3E-12 4.4E-17 113.3 10.3 81 43-136 1-83 (195)
27 3rqz_A Metallophosphoesterase; 99.3 1.7E-12 5.9E-17 116.8 8.9 81 212-321 92-193 (246)
28 1su1_A Hypothetical protein YF 99.3 1.8E-11 6.2E-16 107.1 11.3 81 32-136 14-100 (208)
29 2z1a_A 5'-nucleotidase; metal- 99.3 2.7E-10 9.3E-15 114.3 20.4 211 41-303 27-243 (552)
30 2kkn_A Uncharacterized protein 99.2 1.2E-10 4.3E-15 99.1 12.8 41 289-339 127-167 (178)
31 2wdc_A SOXB, sulfur oxidation 99.0 3.4E-08 1.2E-12 98.9 20.9 188 79-316 107-305 (562)
32 1hp1_A 5'-nucleotidase; metall 99.0 2.6E-08 9E-13 99.2 19.8 94 42-151 7-107 (516)
33 3qfk_A Uncharacterized protein 98.9 5.1E-08 1.7E-12 97.3 20.2 239 41-318 17-266 (527)
34 4h2g_A 5'-nucleotidase; dimer, 98.9 2.1E-08 7E-13 100.4 15.1 209 42-302 24-244 (546)
35 3ive_A Nucleotidase; structura 98.8 2E-07 7E-12 92.4 18.6 104 42-151 5-109 (509)
36 3ztv_A NAD nucleotidase, NADN; 98.7 1.2E-07 4.3E-12 95.4 13.4 207 42-302 11-230 (579)
37 3gve_A YFKN protein; alpha-bet 98.5 1.8E-05 6E-10 74.1 21.5 103 43-153 11-126 (341)
38 3jyf_A 2',3'-cyclic nucleotide 98.4 1.3E-05 4.3E-10 75.0 18.7 103 43-153 8-119 (339)
39 4h1s_A 5'-nucleotidase; hydrol 98.3 9.8E-05 3.3E-09 73.5 22.2 96 43-140 3-99 (530)
40 3c9f_A 5'-nucleotidase; 2',3'- 98.3 1.8E-05 6.3E-10 78.9 16.8 91 41-139 13-109 (557)
41 1g5b_A Serine/threonine protei 98.1 2.9E-06 9.8E-11 74.5 5.4 68 41-136 10-78 (221)
42 2qjc_A Diadenosine tetraphosph 97.9 1E-05 3.5E-10 73.0 5.5 65 44-136 19-84 (262)
43 2dfj_A Diadenosinetetraphospha 97.9 9.3E-06 3.2E-10 73.9 4.8 67 44-136 1-68 (280)
44 1t71_A Phosphatase, conserved 97.8 0.00023 7.8E-09 64.2 13.0 75 42-139 3-77 (281)
45 2z06_A Putative uncharacterize 97.6 0.0062 2.1E-07 53.8 18.6 81 44-153 1-81 (252)
46 3h63_A Serine/threonine-protei 97.5 0.00048 1.6E-08 63.1 10.1 84 31-136 47-131 (315)
47 2ie4_C PP2A-alpha;, serine/thr 97.5 0.00024 8.3E-09 65.2 7.9 71 44-137 50-121 (309)
48 2z72_A Protein-tyrosine-phosph 97.4 0.00023 7.8E-09 66.6 7.3 45 278-322 266-310 (342)
49 1t70_A Phosphatase; crystal, X 97.4 0.0068 2.3E-07 53.8 16.2 81 44-153 1-81 (255)
50 1fjm_A Protein serine/threonin 97.4 0.00036 1.2E-08 64.5 7.8 72 44-137 57-128 (330)
51 3icf_A PPT, serine/threonine-p 97.4 0.00084 2.9E-08 62.0 10.2 80 35-136 53-135 (335)
52 1wao_1 Serine/threonine protei 97.4 0.00069 2.4E-08 66.5 10.2 80 35-136 204-284 (477)
53 3e0j_A DNA polymerase subunit 97.3 0.0007 2.4E-08 65.2 8.8 83 41-138 198-310 (476)
54 3e7a_A PP-1A, serine/threonine 97.2 0.00065 2.2E-08 61.8 7.8 71 44-136 56-126 (299)
55 3ll8_A Serine/threonine-protei 97.1 0.0011 3.8E-08 61.6 8.0 72 44-137 70-141 (357)
56 1aui_A Calcineurin, serine/thr 96.9 0.0019 6.4E-08 62.7 7.8 26 278-303 261-286 (521)
57 3flo_A DNA polymerase alpha su 95.6 0.041 1.4E-06 52.8 9.2 82 41-137 145-247 (460)
58 2z72_A Protein-tyrosine-phosph 65.5 11 0.00038 34.5 6.4 72 42-136 69-152 (342)
59 1g5b_A Serine/threonine protei 64.4 3.3 0.00011 35.2 2.5 29 289-318 177-205 (221)
60 4hwg_A UDP-N-acetylglucosamine 58.3 13 0.00043 34.8 5.5 46 77-133 81-126 (385)
61 3iz5_H 60S ribosomal protein L 48.1 30 0.001 29.9 5.5 50 80-136 133-182 (258)
62 1ivn_A Thioesterase I; hydrola 46.7 62 0.0021 25.9 7.5 52 79-130 51-105 (190)
63 4a17_F RPL7A, 60S ribosomal pr 45.0 56 0.0019 28.3 6.8 50 80-136 130-179 (255)
64 3ot5_A UDP-N-acetylglucosamine 43.7 39 0.0013 31.5 6.3 46 77-132 101-146 (403)
65 3dzc_A UDP-N-acetylglucosamine 40.8 49 0.0017 30.7 6.5 46 77-132 98-143 (396)
66 2xzm_U Ribosomal protein L7AE 40.0 89 0.003 23.8 6.7 49 81-136 31-79 (126)
67 3v7e_A Ribosome-associated pro 37.3 46 0.0016 23.1 4.4 49 80-136 17-65 (82)
68 1mjh_A Protein (ATP-binding do 37.2 65 0.0022 25.0 5.9 12 41-52 33-44 (162)
69 2kqs_B Death domain-associated 36.8 19 0.00065 19.0 1.6 17 39-55 8-24 (26)
70 3hp4_A GDSL-esterase; psychrot 35.8 76 0.0026 25.1 6.3 51 80-130 56-109 (185)
71 2lbw_A H/ACA ribonucleoprotein 35.3 86 0.0029 23.6 6.0 49 81-136 27-75 (121)
72 3j21_Z 50S ribosomal protein L 34.8 1.2E+02 0.0043 21.7 6.7 49 80-136 21-70 (99)
73 3cpq_A 50S ribosomal protein L 33.8 1.1E+02 0.0038 22.5 6.3 44 81-132 28-71 (110)
74 1w41_A 50S ribosomal protein L 32.6 1.2E+02 0.0041 21.8 6.2 45 80-132 22-66 (101)
75 3jyw_G 60S ribosomal protein L 31.8 56 0.0019 24.5 4.3 50 80-136 31-80 (113)
76 1vi6_A 30S ribosomal protein S 30.6 63 0.0022 27.1 4.8 10 89-99 114-123 (208)
77 3w01_A Heptaprenylglyceryl pho 28.4 68 0.0023 27.5 4.7 45 86-136 32-76 (235)
78 2ale_A SNU13, NHP2/L7AE family 28.0 91 0.0031 24.0 5.0 47 82-135 40-86 (134)
79 1rlg_A 50S ribosomal protein L 27.8 1.5E+02 0.0051 22.1 6.2 47 82-135 35-81 (119)
80 3j20_B 30S ribosomal protein S 27.5 57 0.0019 27.3 4.0 9 89-97 110-118 (202)
81 3bch_A 40S ribosomal protein S 27.3 71 0.0024 27.7 4.6 37 89-136 150-200 (253)
82 2xzm_B RPS0E; ribosome, transl 26.5 54 0.0018 28.3 3.7 37 89-136 113-163 (241)
83 3v7q_A Probable ribosomal prot 25.9 1.8E+02 0.0063 20.9 6.2 46 80-133 25-70 (101)
84 3iz5_f 60S ribosomal protein L 25.6 1.6E+02 0.0056 21.8 5.9 47 81-135 33-79 (112)
85 1xbi_A 50S ribosomal protein L 25.5 1.3E+02 0.0043 22.6 5.4 49 81-136 36-84 (120)
86 3u5c_A 40S ribosomal protein S 25.4 75 0.0026 27.5 4.4 38 89-137 116-167 (252)
87 2dum_A Hypothetical protein PH 25.2 1.2E+02 0.0043 23.5 5.7 12 41-52 33-44 (170)
88 1jmv_A USPA, universal stress 25.0 1.6E+02 0.0056 21.8 6.3 48 79-133 91-139 (141)
89 2qjc_A Diadenosine tetraphosph 25.0 43 0.0015 29.2 2.9 35 93-133 20-55 (262)
90 3on1_A BH2414 protein; structu 24.9 1.6E+02 0.0056 21.1 5.7 46 80-133 24-69 (101)
91 3tnj_A Universal stress protei 24.8 61 0.0021 24.7 3.6 13 123-135 138-150 (150)
92 2q0q_A ARYL esterase; SGNH hyd 23.9 1.9E+02 0.0065 23.3 6.9 46 79-124 71-122 (216)
93 2z08_A Universal stress protei 23.8 1.4E+02 0.0046 22.2 5.5 10 42-51 31-40 (137)
94 3vzx_A Heptaprenylglyceryl pho 23.3 1.1E+02 0.0038 26.0 5.1 45 86-136 27-71 (228)
95 3qax_A Probable ABC transporte 22.7 21 0.00072 30.3 0.5 18 284-301 173-190 (268)
96 1iv0_A Hypothetical protein; r 22.3 2E+02 0.0069 20.6 5.7 50 77-130 38-91 (98)
97 2zkr_f 60S ribosomal protein L 21.7 1.9E+02 0.0067 25.1 6.3 50 80-136 141-190 (266)
98 1vq8_F 50S ribosomal protein L 21.7 1.5E+02 0.0053 22.1 5.2 48 82-136 37-84 (120)
99 3p94_A GDSL-like lipase; serin 21.7 1.4E+02 0.0049 23.7 5.6 51 80-130 64-120 (204)
100 2zkq_b 40S ribosomal protein S 21.5 93 0.0032 27.6 4.3 9 89-97 117-125 (295)
101 3izc_H 60S ribosomal protein R 21.4 1.7E+02 0.0059 25.3 5.9 50 80-136 137-186 (256)
102 3iz6_A 40S ribosomal protein S 21.4 90 0.0031 27.8 4.2 37 89-136 121-171 (305)
103 3dci_A Arylesterase; SGNH_hydr 21.4 1.9E+02 0.0065 23.9 6.4 46 77-122 87-138 (232)
104 3hh1_A Tetrapyrrole methylase 21.3 1E+02 0.0035 22.8 4.1 45 80-132 70-116 (117)
105 1jlj_A Gephyrin; globular alph 21.2 1.6E+02 0.0055 24.0 5.7 20 80-99 68-87 (189)
106 3m8t_A 'BLR6230 protein; subcl 20.6 1.3E+02 0.0045 26.0 5.4 41 94-136 197-244 (294)
107 2yad_A Surfactant protein C br 20.2 17 0.00059 28.3 -0.6 33 365-397 75-107 (171)
108 3mil_A Isoamyl acetate-hydroly 20.2 2.3E+02 0.0077 23.2 6.7 52 79-130 60-119 (240)
109 2fc3_A 50S ribosomal protein L 20.0 1.6E+02 0.0055 22.1 5.0 47 82-135 36-82 (124)
No 1
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.94 E-value=5.6e-26 Score=223.40 Aligned_cols=264 Identities=15% Similarity=0.164 Sum_probs=151.3
Q ss_pred CCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCc----ccccCC--CChhHHHHHHHHHHhcCCCEEEEcCCccCCCC
Q 015684 32 QERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLP----SQVAGC--SDLNTTAFINRMISAEKPDLIVFTGDNIFGFD 105 (402)
Q Consensus 32 ~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~ 105 (402)
.+.++.+.++++|||+|+||+|++............ ...+.. .....++.+.+.+++.+||+||++|| +.+.+
T Consensus 28 ~~~~~~~~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD-l~~~~ 106 (443)
T 2xmo_A 28 EKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGD-LTNNG 106 (443)
T ss_dssp -----CBCSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESC-CBSSC
T ss_pred ccccccccCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCC-CCCCC
Confidence 344566777889999999999997532100000000 000000 01234455555566789999999999 45555
Q ss_pred hhhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCC---------------HHHHHHHHHhcCCcccccCCCCCccccc-
Q 015684 106 ATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLS---------------REGVMKHIVTLKNTLSQVNPSDAHIIDG- 169 (402)
Q Consensus 106 ~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~---------------~~~~~~~~~~~~~~~~~~~p~~~~~~~g- 169 (402)
....++.+.+.++.+...++|+++|+||||...... .+.+.+.+....+ ........
T Consensus 107 ~~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 179 (443)
T 2xmo_A 107 EKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGY-------EDAISSDEF 179 (443)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCC-------TTCSEECSS
T ss_pred CHHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcCh-------hhhhccCCC
Confidence 555566677777776556899999999999865432 1222222110000 00000000
Q ss_pred cccceEEeccCCCCCCCCceeEEEEEEeCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeE
Q 015684 170 FGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTV---PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGL 246 (402)
Q Consensus 170 ~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~---~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~i 246 (402)
...|.+...+ .++++++|+..+... ......|.++++|++||++.+++.++ .+.++|
T Consensus 180 ~~~y~~~~~~----------~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~----------~~~~~I 239 (443)
T 2xmo_A 180 SLSYLAAPSS----------KVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK----------NGAKLI 239 (443)
T ss_dssp SSCEEECSBS----------SEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH----------TTCEEE
T ss_pred CceEEEecCC----------CEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH----------cCCeEE
Confidence 1123322111 288999999754321 00113477899999999999987754 467899
Q ss_pred EEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc--CCC--eeEEecCCccCC
Q 015684 247 VYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR--LTG--IQLCYGGGFGYH 322 (402)
Q Consensus 247 v~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~--~~g--i~~~~~~~~g~~ 322 (402)
+++|||+......+. .. ....+...+..++++++|+++|+||+|.+..... .+| +..+.+++.+.
T Consensus 240 v~~H~p~~~~~~~~~--------~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~- 308 (443)
T 2xmo_A 240 PVLHHNLTDHNDVIQ--------KG--YTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV- 308 (443)
T ss_dssp EECSSBSSCSSCC----------CC--SBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS-
T ss_pred EEECCCCcccccccc--------cc--cccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc-
Confidence 999999865322220 00 1123566677777777899999999999654321 233 34444443321
Q ss_pred CCCCCCCCcceEEEEEee
Q 015684 323 AYGKAGWERRARVVVASL 340 (402)
Q Consensus 323 ~y~~~~~~~g~rv~ei~~ 340 (402)
.++++++++++.
T Consensus 309 ------~p~~y~il~i~~ 320 (443)
T 2xmo_A 309 ------FPHKYGNITYSA 320 (443)
T ss_dssp ------TTCEEEEEEEET
T ss_pred ------CCCCeEEEEEeC
Confidence 247899999973
No 2
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.94 E-value=5.6e-25 Score=207.65 Aligned_cols=235 Identities=21% Similarity=0.236 Sum_probs=156.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~ 118 (402)
..+|||+++||+|++.......... .....++.+.+.+++ .+||+||++|| +++.+..+.++.+.+.++
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~--------~~~~~l~~~l~~i~~~~~~~d~vi~~GD-l~~~~~~~~~~~~~~~l~ 93 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAV--------DADDRLGELLEQLNQSGLRPDAIVFTGD-LADKGEPAAYRKLRGLVE 93 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTB--------CHHHHHHHHHHHHHHHTCCCSEEEECSC-CBTTCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCccccccc--------CHHHHHHHHHHHHHhcCCCCCEEEECCC-CCCCCCHHHHHHHHHHHH
Confidence 4689999999999976543211100 113344555555555 79999999999 556666677777888887
Q ss_pred HhHh-CCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEe
Q 015684 119 PAIA-SNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (402)
Q Consensus 119 ~~~~-~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lD 197 (402)
++.+ .++|+++|+||||.. ..+.+.+... . ...+..+|.+.+.+ ++++++|
T Consensus 94 ~l~~~~~~pv~~v~GNHD~~-----~~~~~~~~~~---------~---~~~~~~~~~~~~~~-----------~~~i~ld 145 (330)
T 3ib7_A 94 PFAAQLGAELVWVMGNHDDR-----AELRKFLLDE---------A---PSMAPLDRVCMIDG-----------LRIIVLD 145 (330)
T ss_dssp HHHHHHTCEEEECCCTTSCH-----HHHHHHHHCC---------C---CCCSCCCEEEEETT-----------EEEEECC
T ss_pred HHHhhcCCCEEEeCCCCCCH-----HHHHHHhccc---------c---cccCCcceEEEeCC-----------EEEEEec
Confidence 7643 589999999999972 2222222110 0 01122356777766 8899999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCC
Q 015684 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (402)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~ 277 (402)
+..+ +. ..+++..+|++||++.|++. .....|+++|||+......+ ... ....
T Consensus 146 s~~~----~~-~~~~~~~~q~~wl~~~l~~~------------~~~~~iv~~Hh~p~~~~~~~------~~~----~~~~ 198 (330)
T 3ib7_A 146 TSVP----GH-HHGEIRASQLGWLAEELATP------------APDGTILALHHPPIPSVLDM------AVT----VELR 198 (330)
T ss_dssp CCCT----TC-CSBCCCHHHHHHHHHHTTSC------------CTTCEEEECSSCSSCCSSGG------GGG----GSBS
T ss_pred CCCC----CC-CCCccCHHHHHHHHHHHHhc------------ccCCeEEEEECCCCCCCccc------ccc----cccc
Confidence 9642 21 36779999999999986532 34558999999775421111 000 1123
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCC--------CCCCCcceEEEEEee
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG--------KAGWERRARVVVASL 340 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~--------~~~~~~g~rv~ei~~ 340 (402)
+...+..+++.++++++++||+|.+ .....+|+.++.+++++++... .....+||++++++.
T Consensus 199 ~~~~l~~~l~~~~v~~v~~GH~H~~-~~~~~~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~ 268 (330)
T 3ib7_A 199 DQAALGRVLRGTDVRAILAGHLHYS-TNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYP 268 (330)
T ss_dssp CHHHHHHHHTTSSEEEEEECSSSSC-EEEEETTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECS
T ss_pred CHHHHHHHHhccCceEEEECCCCCc-ccceECCEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEEC
Confidence 5677788888889999999999994 5667899999999888753221 112357899999973
No 3
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.93 E-value=2.1e-24 Score=202.62 Aligned_cols=268 Identities=17% Similarity=0.155 Sum_probs=152.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCC-ChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh---HHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCS-DLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD---AAKSLNAA 116 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~---~~~~~~~~ 116 (402)
+..|||+++||+|++...........+. ..+. ....++.+.+.+++.+||+||++||++. .+... ..+.+...
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~-~~~~~~~~~~~~~~~~ 79 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRR--RYYRGSADLLRDAVLQWRRERVQCVVQLGDIID-GHNRRRDASDRALDTV 79 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSE--ECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBC-THHHHTTCHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchH--HHHHHHHHHHHHHHHHHHhcCCCEEEECCCccC-CCCCcchHHHHHHHHH
Confidence 4679999999999986532110000000 0000 1123334444455579999999999554 43211 12333344
Q ss_pred HhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccc--cccccceEEe-ccCCCCCCCCceeEEE
Q 015684 117 FAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHII--DGFGNYNLEI-GGVKGSGFENKSVLNL 193 (402)
Q Consensus 117 l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~g~~~y~~~~-~~~~~~~~~~~~~~~l 193 (402)
++.+...++|+++++||||... ..++.+ ...+........+...... .+..+|.+.. .+ +++
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~-----------~~~ 144 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFYN-FSRPSL---LSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPN-----------FRF 144 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHHH-CCHHHH---HTSTTCCCC------CEECGGGTCCCEEEEEETT-----------EEE
T ss_pred HHHHHhcCCcEEEecCCCCccc-CCHHHH---hhhhCCcccccccccccccCCCCceEEEEecCCC-----------EEE
Confidence 4444446889999999999842 122222 1111110000000000001 1234566665 44 889
Q ss_pred EEEeCCCCCCC--------------------CC-----------------CCCCCCCCHHHHHHHHHHHHHHHHhhcCCc
Q 015684 194 YFLDSGDYSTV--------------------PS-----------------VPGYGWIKPSQQFWFEQTSARLQRAYMSKP 236 (402)
Q Consensus 194 ~~lDs~~~~~~--------------------~~-----------------~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~ 236 (402)
+++|+..++.. +. ....+.+.++|++||++.|++..+
T Consensus 145 i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~------ 218 (322)
T 2nxf_A 145 VLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH------ 218 (322)
T ss_dssp EECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH------
T ss_pred EEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh------
Confidence 99999754210 00 011367889999999999887653
Q ss_pred cccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcC-CeeEEEeccCCCCcccccCCCeeEEe
Q 015684 237 AAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCY 315 (402)
Q Consensus 237 ~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~ 315 (402)
.++++|+++|+|+...... .. ....+.+.+..+++++ +|+++||||+|.+......+|+.++.
T Consensus 219 ----~~~~~iv~~H~p~~~~~~~---------~~---~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~~~g~~~i~ 282 (322)
T 2nxf_A 219 ----KQERVLIFSHLPVHPCAAD---------PI---CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHIT 282 (322)
T ss_dssp ----HTCEEEEEESSCCCTTSSC---------GG---GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEECTTSCEEEE
T ss_pred ----cCCcEEEEEccCCCCCCCC---------cc---ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceeccCCceEEE
Confidence 3568999999998653110 00 1112556677777776 79999999999965543378998887
Q ss_pred cCCccCCCCCCCCCCcceEEEEEeeccccccCCCcccceEEEEEcC
Q 015684 316 GGGFGYHAYGKAGWERRARVVVASLEKTEKRGWGDVKSIKTWKRLD 361 (402)
Q Consensus 316 ~~~~g~~~y~~~~~~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~ 361 (402)
.+++.-.. .-.+++++++++.+ .-.+..|-|..
T Consensus 283 ~~~~~~~~----~~~~~y~~v~~~~~---------~~~~~~~~~~~ 315 (322)
T 2nxf_A 283 LEGVIETP----PHSHAFATAYLYED---------RMVMKGRGRVE 315 (322)
T ss_dssp CCCGGGCC----TTSCEEEEEEECSS---------EEEEEEEETSC
T ss_pred ecchhhCC----CCCCcEEEEEEECC---------eEEEEeccccC
Confidence 76653211 12578999999732 14566665444
No 4
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.93 E-value=1.5e-23 Score=192.44 Aligned_cols=232 Identities=16% Similarity=0.184 Sum_probs=142.1
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc--CCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE--KPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
|||+++||+|++......... ......++.+.+.+++. +||+||++||+ .+.+....++.+.+.++.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~--------~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl-~~~~~~~~~~~~~~~l~~-- 69 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGF--------IDVNAANADVVSQLNALRERPDAVVVSGDI-VNCGRPEEYQVARQILGS-- 69 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTT--------BCHHHHHHHHHHHHHTCSSCCSEEEEESCC-BSSCCHHHHHHHHHHHTT--
T ss_pred CEEEEEecCCcCCCCcccccc--------cCHHHHHHHHHHHHHhcCCCCCEEEECCCC-CCCCCHHHHHHHHHHHHh--
Confidence 699999999998533211100 00122334444444443 68999999994 555555555555555553
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
.++|+++|+||||... .+.+.+... + ... .. ..+..+|.+...+ ++++++|+..+
T Consensus 70 -l~~p~~~v~GNHD~~~-----~~~~~~~~~-~--~~~--~~---~~~~~~~~~~~~~-----------~~~i~ld~~~~ 124 (274)
T 3d03_A 70 -LNYPLYLIPGNHDDKA-----LFLEYLQPL-C--PQL--GS---DANNMRCAVDDFA-----------TRLLFIDSSRA 124 (274)
T ss_dssp -CSSCEEEECCTTSCHH-----HHHHHHGGG-S--GGG--CS---CGGGCCEEECSSS-----------SEEEECCCCCT
T ss_pred -cCCCEEEECCCCCCHH-----HHHHHhhhh-h--cCc--cc---CCCceEEEEEeCC-----------EEEEEEeCCCC
Confidence 4789999999999832 122222111 0 000 00 0022345555443 88999999643
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHH
Q 015684 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (402)
Q Consensus 202 ~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 281 (402)
.. ..+.++++|++||++.|++. ++.++|+++|+|+......+ ... ....+...
T Consensus 125 ~~-----~~~~~~~~~~~wl~~~l~~~------------~~~~~iv~~H~p~~~~~~~~------~~~----~~~~~~~~ 177 (274)
T 3d03_A 125 GT-----SKGWLTDETISWLEAQLFEG------------GDKPATIFMHHPPLPLGNAQ------MDP----IACENGHR 177 (274)
T ss_dssp TC-----SSBCCCHHHHHHHHHHHHHH------------TTSCEEEEESSCSSCCSCTT------TGG----GSBTTTHH
T ss_pred CC-----CCCeeCHHHHHHHHHHHHhC------------CCCCEEEEECCCCcccCCcc------cCc----ccCcCHHH
Confidence 21 35678999999999997753 45689999999985422111 000 11134556
Q ss_pred HHHHHHcC-CeeEEEeccCCCCcccccCCCeeEEecCCccCCCC-C-------CCCCCcceEEEEEe
Q 015684 282 FTTMVAAG-DVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY-G-------KAGWERRARVVVAS 339 (402)
Q Consensus 282 l~~l~~~~-~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y-~-------~~~~~~g~rv~ei~ 339 (402)
+..+++++ +++++++||+|.. .....+|+.++.+++++.+.. . .....+|+++++++
T Consensus 178 l~~~l~~~~~v~~vl~GH~H~~-~~~~~~g~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~ 243 (274)
T 3d03_A 178 LLALVERFPSLTRIFCGHNHSL-TMTQYRQALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQV 243 (274)
T ss_dssp HHHHHHHCTTEEEEEECSSSSC-EEEEETTEEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEE
T ss_pred HHHHHHhCCCceEEEeCCCCCc-hhheECCEEEEEcCCcceeeccCCCccccccccCCCceEEEEEe
Confidence 66777665 7999999999994 455678887777776654321 1 01235899999997
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.90 E-value=3.9e-24 Score=200.07 Aligned_cols=271 Identities=17% Similarity=0.204 Sum_probs=155.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh-HHHHHHHHHhH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD-AAKSLNAAFAP 119 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~-~~~~~~~~l~~ 119 (402)
+++|||+++||+|++....... . ....+.+.+.+++++.+||+||++||+++..+... ....+.+.+..
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~~-~---------~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~ 73 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFHT-A---------REMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFED 73 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSSC-H---------HHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTT
T ss_pred CCceEEEEEcccCCCCCccccC-c---------hHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHH
Confidence 4789999999999875421000 0 01234566667677789999999999776543211 01123333333
Q ss_pred hH---hC-CCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEE
Q 015684 120 AI---AS-NIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYF 195 (402)
Q Consensus 120 ~~---~~-~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~ 195 (402)
+. .. ++|+++++||||........ ..+ .. .. . +......+|.+.+.-.. ....+++++
T Consensus 74 ~~~~~~l~~~p~~~v~GNHD~~~~~~~~--~~~-~~-------~~-~--~~~~~~~~y~~~~~~~~-----~~~~~~~i~ 135 (313)
T 1ute_A 74 VFSDPSLRNVPWHVLAGNHDHLGNVSAQ--IAY-SK-------IS-K--RWNFPSPYYRLRFKIPR-----SNVSVAIFM 135 (313)
T ss_dssp TSCSGGGTTCCEEECCCHHHHHSCHHHH--HHG-GG-------TS-T--TEECCSSSEEEEEECTT-----SSCEEEEEE
T ss_pred HcCchhhcCCCEEEECCCCccCCCcccc--ccc-cc-------cC-C--CccCcccceEEEEecCC-----CCceEEEEE
Confidence 22 24 79999999999986543211 011 00 00 0 11112234555442100 001388999
Q ss_pred EeCCCCCCC--------CCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccc
Q 015684 196 LDSGDYSTV--------PSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGV 267 (402)
Q Consensus 196 lDs~~~~~~--------~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~ 267 (402)
|||..+... +.....+.+.++|++||++.|++. +.+++|+++|+|+...... +.
T Consensus 136 lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~------------~~~~~iv~~H~p~~~~~~~------~~ 197 (313)
T 1ute_A 136 LDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA------------KEDYVLVAGHYPVWSIAEH------GP 197 (313)
T ss_dssp CCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC------------CCSEEEEECSSCSSCCSSS------CC
T ss_pred EEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhC------------CCCeEEEEECCCCccCCCC------CC
Confidence 998542111 011124457889999999987642 4578999999998652110 00
Q ss_pred cCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC-----------------CCCC
Q 015684 268 RQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK-----------------AGWE 330 (402)
Q Consensus 268 ~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~-----------------~~~~ 330 (402)
.. ...+.+..++++++|+++|+||+|........+|+.++.+|+.|...... ....
T Consensus 198 ~~-------~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (313)
T 1ute_A 198 TH-------CLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270 (313)
T ss_dssp CH-------HHHHHTHHHHHHTTCSEEEECSSSSEEEEECTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSC
T ss_pred cH-------HHHHHHHHHHHHcCCcEEEECChhhhhhccCCCCceEEEECCCcCcCccccccccCCCcccceeccCcCCC
Confidence 00 01234566677778999999999986665557888888777766422110 0112
Q ss_pred cceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecC
Q 015684 331 RRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (402)
Q Consensus 331 ~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~ 377 (402)
+||.+++++.+ .-..++... ++ +++|..+|....
T Consensus 271 ~gy~~l~v~~~----------~~~~~~~~~-~g--~~~~~~~l~~~~ 304 (313)
T 1ute_A 271 GGFAYVEITPK----------EMSVTYIEA-SG--KSLFKTKLPRRA 304 (313)
T ss_dssp CEEEEEEECSS----------CEEEEEEET-TS--CEEEEEEECCCC
T ss_pred CceEEEEEEcC----------EEEEEEEcC-CC--cEEEEEEecccc
Confidence 68999998621 112233344 33 367777766544
No 6
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=2.5e-23 Score=195.57 Aligned_cols=250 Identities=12% Similarity=0.040 Sum_probs=141.8
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh----hH-HHHHHHH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT----DA-AKSLNAA 116 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~----~~-~~~~~~~ 116 (402)
.+++|++++|+|.+... .....+.|.+++++.+|||||++||+++. +.. .. .+.+.+.
T Consensus 2 ~~l~f~~igD~g~g~~~----------------q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~ 64 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKG----------------QILNAKYFKQFIKNERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDV 64 (342)
T ss_dssp CCEEEEECCSCBSCCHH----------------HHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTT
T ss_pred ceEEEEEEecCCCCCch----------------HHHHHHHHHHHHhhcCCCEEEECCCcccC-CCCcCccHHHHHHHHHH
Confidence 47899999999976321 23456778888888999999999997777 431 11 1222233
Q ss_pred HhHh-HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcc-------c--ccCCCCCccccccccceEEe--ccCCCCC
Q 015684 117 FAPA-IASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTL-------S--QVNPSDAHIIDGFGNYNLEI--GGVKGSG 184 (402)
Q Consensus 117 l~~~-~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~-------~--~~~p~~~~~~~g~~~y~~~~--~~~~~~~ 184 (402)
+... ...++||++|+||||...+... ++ +... ..+.. . .......++.....+|.+.. .-..+..
T Consensus 65 ~~~~~~~~~~P~~~vlGNHD~~~~~~a-q~-~~~~-~~~~~~~~~~~~~~~~~~~~~~rw~~P~~yY~~~~~f~~~~~~~ 141 (342)
T 3tgh_A 65 YSEEKGDMYMPFFTVLGTRDWTGNYNA-QL-LKGQ-GIYIEKNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPS 141 (342)
T ss_dssp SCCGGGTTCSEEEECCCHHHHTSCHHH-HH-HHHH-C---------------CCCSSCEEECSSSSEEEEEEEEEC----
T ss_pred hhhhhhhhCCCEEEeCCCCccCCCchH-hh-hhhh-cccccccccccccccccccCCCCccCCcceEEEEEEeecccccc
Confidence 3222 2368999999999999765422 11 1111 00000 0 00011112222223444311 1000000
Q ss_pred CC----CceeEEEEEEeCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcc
Q 015684 185 FE----NKSVLNLYFLDSGDYSTVPSVP-GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYF 259 (402)
Q Consensus 185 ~~----~~~~~~l~~lDs~~~~~~~~~~-~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~ 259 (402)
+. ....+++++|||.......... ..+...++|++||++.|+ ..+++||++|||++.....
T Consensus 142 ~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~--------------~~~~~IV~~HhP~~~~~~~ 207 (342)
T 3tgh_A 142 IVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKK--------------IADFIIVVGDQPIYSSGYS 207 (342)
T ss_dssp -----CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHH--------------HCSEEEEECSSCSSCSSTT
T ss_pred ccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhc--------------cCCcEEEEECCCCCCCCCC
Confidence 00 1123899999996543211000 001244689999999973 2468999999999653110
Q ss_pred cCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCC---C------CCC
Q 015684 260 DQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGK---A------GWE 330 (402)
Q Consensus 260 ~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~---~------~~~ 330 (402)
+.. . ...+.+..|+++++|+++|+||+|.... ...+|+.++.+|+.|...... . .-.
T Consensus 208 ------~~~-~------~l~~~l~~ll~~~~VdlvlsGH~H~~~~-~~~~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~ 273 (342)
T 3tgh_A 208 ------RGS-S------YLAYYLLPLLKDAEVDLYISGHDNNMEV-IEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSD 273 (342)
T ss_dssp ------CCC-H------HHHHHTHHHHHHTTCCEEEECSSSSEEE-EEETTEEEEEECCSSCCCCCCSSCCTTEEEEECS
T ss_pred ------CCc-H------HHHHHHHHHHHHcCCCEEEECCCcceeE-EeeCCcEEEEeCccccccccCCCCCCcceeecCC
Confidence 000 0 0135567788888999999999999544 345788877776665322211 1 124
Q ss_pred cceEEEEEe
Q 015684 331 RRARVVVAS 339 (402)
Q Consensus 331 ~g~rv~ei~ 339 (402)
.|+.+++++
T Consensus 274 ~Gf~~l~v~ 282 (342)
T 3tgh_A 274 IGFCVHELS 282 (342)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEEE
Confidence 688999986
No 7
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.89 E-value=5.2e-22 Score=193.97 Aligned_cols=261 Identities=15% Similarity=0.174 Sum_probs=155.2
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCCh----hhHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDA----TDAAKSLNA 115 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~----~~~~~~~~~ 115 (402)
...+||+++||+|.+.. ....+..+.+. .+||+||++||+++..+. ...++.+.+
T Consensus 124 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~ 183 (426)
T 1xzw_A 124 DVPYVFGLIGDIGQTHD--------------------SNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGR 183 (426)
T ss_dssp TCCEEEEEECSCTTBHH--------------------HHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCc--------------------hHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHH
Confidence 46799999999997521 11233333333 399999999997765442 234555666
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCCCC---HHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEE
Q 015684 116 AFAPAIASNIPWVAVLGNHDQESTLS---REGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (402)
.++++. ..+|+++++||||...... .+.+..+...+. .|.......+..+|++..++ ++
T Consensus 184 ~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~------~p~~~~~~~~~~~ys~~~g~-----------~~ 245 (426)
T 1xzw_A 184 FSERSV-AYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYP------TPHEASGSGDPLWYAIKRAS-----------AH 245 (426)
T ss_dssp HHHHHH-TTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSC------CCCGGGTCSSTTSEEEEETT-----------EE
T ss_pred HHHHHH-hcCCEEEeccccccccCCccccccCChhheEEEe------CCcccCCCCCCCeEEEEECC-----------EE
Confidence 777654 4899999999999875321 001111222111 11110001122467777766 89
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcC
Q 015684 193 LYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (402)
Q Consensus 193 l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~ 272 (402)
+++|||... ++ ...+|++||++.|++..+ ...+++|+++|+|++...... ..+..
T Consensus 246 ~i~Ldt~~~--------~~-~~~~Q~~WL~~~L~~~~~---------~~~~w~Iv~~H~P~~~~~~~~-------~~~~~ 300 (426)
T 1xzw_A 246 IIVLSSYSG--------FV-KYSPQYKWFTSELEKVNR---------SETPWLIVLVHAPLYNSYEAH-------YMEGE 300 (426)
T ss_dssp EEECCTTSC--------CS-TTSHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBSTT-------TTTTH
T ss_pred EEEeeCccc--------CC-CCHHHHHHHHHHHHhhhh---------cCCCEEEEEeccCceeCCCcc-------cCCCH
Confidence 999998421 11 357899999999876432 145579999999986521100 00000
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCccccc------------------CCCeeEEecCCccCC-----CCC--CC
Q 015684 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGR------------------LTGIQLCYGGGFGYH-----AYG--KA 327 (402)
Q Consensus 273 ~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~------------------~~gi~~~~~~~~g~~-----~y~--~~ 327 (402)
.-.+.+..++++++|+++|+||+|.+.+... .+|+..+..|+.|.. .+. .+
T Consensus 301 ----~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 301 ----AMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp ----HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred ----HHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCccccccccccCCCCC
Confidence 0135567777888899999999998654321 234444444443321 111 11
Q ss_pred CC------CcceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecC
Q 015684 328 GW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKT 377 (402)
Q Consensus 328 ~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~ 377 (402)
.| ..|+-.+++..+ ..-..+|.+.++++..++|+.+|..+-
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~---------t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNR---------THAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSS---------SEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcC---------CeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 12 245666666411 134567888888877789999887753
No 8
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.87 E-value=6.1e-21 Score=186.29 Aligned_cols=263 Identities=16% Similarity=0.171 Sum_probs=151.3
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCCh----hhHHHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDA----TDAAKSLNA 115 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~----~~~~~~~~~ 115 (402)
...+||+++||+|.+.. ..+.+..+.+. .+||+||++||+++..+. ...++.+.+
T Consensus 117 ~~~~~f~~igD~~~~~~--------------------~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~ 176 (424)
T 2qfp_A 117 DVPYTFGLIGDLGQSFD--------------------SNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGR 176 (424)
T ss_dssp TCCEEEEEECSCTTBHH--------------------HHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCC--------------------hHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHH
Confidence 35799999999997531 11223333332 389999999997775432 224455666
Q ss_pred HHhHhHhCCCCEEEEcCCCCCCCCCCHH---HHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEE
Q 015684 116 AFAPAIASNIPWVAVLGNHDQESTLSRE---GVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (402)
Q Consensus 116 ~l~~~~~~~iP~~~v~GNHD~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (402)
.++++. ..+|+++++||||........ .+..+...+. .|.......+..+|++.+++ ++
T Consensus 177 ~l~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~------~P~~~~~~~~~~~ys~~~g~-----------~~ 238 (424)
T 2qfp_A 177 FTERSV-AYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYH------VPYEASQSTSPFWYSIKRAS-----------AH 238 (424)
T ss_dssp HHHHHH-TTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCC------CCGGGGTCSSTTSEEEEETT-----------EE
T ss_pred HHHHHH-hcCCeEeecCCcccccCCcccccccchhhhhhcc------CCccccCCCCCcEEEEEECC-----------EE
Confidence 666654 479999999999986421100 0111211111 11100001122467788765 89
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcC
Q 015684 193 LYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGI 272 (402)
Q Consensus 193 l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~ 272 (402)
+++||+... ++.. .+|++||++.|++..+ ...+++|+++|+|++...... ..+..
T Consensus 239 ~i~Ldt~~~--------~~~~-~~Q~~WL~~~L~~~~~---------~~~~~~Iv~~H~P~~~~~~~~-------~~~~~ 293 (424)
T 2qfp_A 239 IIVLSSYSA--------YGRG-TPQYTWLKKELRKVKR---------SETPWLIVLMHSPLYNSYNHH-------FMEGE 293 (424)
T ss_dssp EEECCTTSC--------CSTT-SHHHHHHHHHHHHCCT---------TTCCEEEEECSSCSSCCBSTT-------TTTTH
T ss_pred EEEecCCcc--------CCCc-HHHHHHHHHHHhhhcc---------cCCCEEEEEeCcCceecCccc-------ccccH
Confidence 999999421 2222 4899999999875422 135679999999996521100 00000
Q ss_pred CCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccC------------------CCeeEEecCCccCC-----CCC--CC
Q 015684 273 SSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRL------------------TGIQLCYGGGFGYH-----AYG--KA 327 (402)
Q Consensus 273 ~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~------------------~gi~~~~~~~~g~~-----~y~--~~ 327 (402)
.-...+..++++++|+++|+||+|.+...... +|...+..|+.|.. .+. .+
T Consensus 294 ----~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p 369 (424)
T 2qfp_A 294 ----AMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQP 369 (424)
T ss_dssp ----HHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCC
T ss_pred ----HHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccccCccCCCCCC
Confidence 01245677777788999999999995443321 23333333333321 111 11
Q ss_pred CC------CcceEEEEEeeccccccCCCcccceEEEEEcCCCCCCcccceeeeecCCC
Q 015684 328 GW------ERRARVVVASLEKTEKRGWGDVKSIKTWKRLDDEHLTGVDGHVLWSKTSS 379 (402)
Q Consensus 328 ~~------~~g~rv~ei~~~~~~~~~~~~~~~~~tw~r~~~~~~~~~d~~~~~~~~~~ 379 (402)
.| ..|+-.+++... .....+|.+.++|+..+.|+.+|...-..
T Consensus 370 ~~s~~~~~~~G~~~l~v~n~---------t~~~~~~~~~~~g~~~~~D~~~i~~~~~~ 418 (424)
T 2qfp_A 370 EYSAFREASFGHGMFDIKNR---------THAHFSWNRNQDGVAVEADSVWFFNRHWY 418 (424)
T ss_dssp TTEEEEECCCEEEEEEECSS---------SEEEEEEEETTSCTTCCSEEEEEECTTTC
T ss_pred CcceEEecCCCEEEEEEEcC---------cEEEEEEEECCCCCEEeeeEEEEEecccc
Confidence 12 235555666411 13455688888888666899988776544
No 9
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.75 E-value=1.1e-17 Score=148.86 Aligned_cols=198 Identities=12% Similarity=0.046 Sum_probs=105.0
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCC-hhhHHHHHHHHHhHhH
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFD-ATDAAKSLNAAFAPAI 121 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~-~~~~~~~~~~~l~~~~ 121 (402)
.|||+++||+|.+. ..++.+.+.+++.+||+||++|| +.+.+ ..+.+. +.++.+.
T Consensus 5 ~mri~~iSD~H~~~--------------------~~~~~~~~~~~~~~~D~vi~~GD-l~~~~~~~~~~~---~~~~~l~ 60 (228)
T 1uf3_A 5 VRYILATSNPMGDL--------------------EALEKFVKLAPDTGADAIALIGN-LMPKAAKSRDYA---AFFRILS 60 (228)
T ss_dssp CCEEEEEECCTTCH--------------------HHHHHHHTHHHHHTCSEEEEESC-SSCTTCCHHHHH---HHHHHHG
T ss_pred eEEEEEEeeccCCH--------------------HHHHHHHHHHhhcCCCEEEECCC-CCCCCCCHHHHH---HHHHHHH
Confidence 58999999999752 22344555556669999999999 55544 333333 3444444
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
+.++|+++|+||||.... +.+.+.... ....|.. .... +..+.+.+ .+.++.+++...
T Consensus 61 ~~~~pv~~v~GNHD~~~~---~~~~~~~~~-----~~~~~~~-~~l~---~~~~~~~~----------~~~i~g~~~~~~ 118 (228)
T 1uf3_A 61 EAHLPTAYVPGPQDAPIW---EYLREAANV-----ELVHPEM-RNVH---ETFTFWRG----------PYLVAGVGGEIA 118 (228)
T ss_dssp GGCSCEEEECCTTSCSHH---HHHHHHHHH-----HHHCTTE-EECB---TSEEEETT----------TEEEEEECSEEE
T ss_pred hcCCcEEEECCCCCchhH---HHHHhhhhh-----hccCcce-EEcc---cceEeeCC----------CcEEecCCCCcC
Confidence 468899999999998431 111111000 0000110 0011 11222220 166777764211
Q ss_pred CCCCCCCCCCCCCHHHH----HHHHHHHHH-HHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCC
Q 015684 202 STVPSVPGYGWIKPSQQ----FWFEQTSAR-LQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSAS 276 (402)
Q Consensus 202 ~~~~~~~~~g~i~~~q~----~Wl~~~l~~-l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~ 276 (402)
.. + .++++++ .|..+.+.+ +++ ....+.|+++|+|+... . . ..
T Consensus 119 ~~------~-~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~il~~H~p~~~~---~------~-------~~ 166 (228)
T 1uf3_A 119 DE------G-EPEEHEALRYPAWVAEYRLKALWE---------LKDYPKIFLFHTMPYHK---G------L-------NE 166 (228)
T ss_dssp SS------S-CCBSSSSCEEEHHHHHHHHGGGGG---------SCSCCEEEEESSCBCBT---T------T-------BT
T ss_pred CC------C-ccChhhcccchhhhHHHHHHHHHh---------CCCCCeEEEEccCcccC---C------c-------cc
Confidence 00 0 1222332 333322111 111 13458999999987431 0 0 01
Q ss_pred CChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCcc
Q 015684 277 VNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFG 320 (402)
Q Consensus 277 ~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g 320 (402)
.+...+..+++..+++++++||+|. .. ...+++.++..|+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~GH~H~-~~-~~~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 167 QGSHEVAHLIKTHNPLLVLVAGKGQ-KH-EMLGASWVVVPGDLS 208 (228)
T ss_dssp TSBHHHHHHHHHHCCSEEEECCSSC-EE-EEETTEEEEECCBGG
T ss_pred cCHHHHHHHHHHhCCCEEEEccccc-Cc-cccCCceEEEecccC
Confidence 2344566666666799999999993 33 345677776665544
No 10
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.73 E-value=2.9e-17 Score=149.35 Aligned_cols=217 Identities=14% Similarity=0.154 Sum_probs=114.4
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhH-------------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDA------------- 109 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~------------- 109 (402)
+|||+++||+|.+.. .++.+.+.++..+||+||++|| +++.+....
T Consensus 5 ~mri~~iSDlH~~~~--------------------~~~~~l~~~~~~~~D~vi~~GD-l~~~~~~~~~~~~~~~~~~~p~ 63 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD--------------------LLPKLKGVIAEKQPDILVVVGN-ILKNEALEKEYERAHLARREPN 63 (260)
T ss_dssp CCEEEEEECCTTCGG--------------------GHHHHHHHHHHHCCSEEEEESC-CCCCHHHHHHHHHHHHTTCCCC
T ss_pred eEEEEEEeecCCChH--------------------HHHHHHHHHHhcCCCEEEECCC-CCCccCcchhhhhhhhhhcccc
Confidence 589999999998531 1244555555679999999999 555543211
Q ss_pred -----------HHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEec
Q 015684 110 -----------AKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIG 178 (402)
Q Consensus 110 -----------~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~ 178 (402)
.+.+.+.++.+.+.++|+++|+||||.... ..+.+.+.... ..+. ..... +...+.+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~---~~~~~~~~~~~-----~~~~-~~~l~--~~~~~~~~ 132 (260)
T 2yvt_A 64 RKVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAET-----AYPN-IRVLH--EGFAGWRG 132 (260)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTT-----TCTT-EEECS--SEEEEETT
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhh---hhHHHHhhhcc-----CCcc-eEEec--CcceEEEC
Confidence 033455566555568999999999998421 11112222110 0000 00111 11113333
Q ss_pred cCCCCCCCCceeEEEEEEeCCCCCCCCCCCCCCCCCHHHHH----HHHH-HHHHHHHhhcCCccccCCCCCeEEEEecCh
Q 015684 179 GVKGSGFENKSVLNLYFLDSGDYSTVPSVPGYGWIKPSQQF----WFEQ-TSARLQRAYMSKPAAQKAPAPGLVYFHIPL 253 (402)
Q Consensus 179 ~~~~~~~~~~~~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~----Wl~~-~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~ 253 (402)
+ ++++.++...... .++++++. |+.+ .|+.+++ ....+.|+++|+|+
T Consensus 133 ~-----------~~i~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~l~~---------~~~~~~Il~~H~pp 184 (260)
T 2yvt_A 133 E-----------FEVIGFGGLLTEH--------EFEEDFVLKYPRWYVEYILKFVNE---------LKPRRLVTIFYTPP 184 (260)
T ss_dssp T-----------EEEEEECSEEESS--------CCBSSSSCEEEHHHHHHHGGGGGG---------SCCCEEEEEESSCC
T ss_pred C-----------EEEEecCCCcCCC--------CcCHHHHhhcchhhHHHHHHHHHh---------cCCCCEEEEECCCc
Confidence 3 6677776521100 12222222 5542 1111221 13456799999987
Q ss_pred hhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcce
Q 015684 254 PEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRA 333 (402)
Q Consensus 254 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~ 333 (402)
.... .. .... .....++..+..+++..++++++|||+|. . ....++..++..|+.+- | ++
T Consensus 185 ~~~~-~d------~~~~--~~~~~~~~~l~~~~~~~~~~~vl~GH~H~-~-~~~~~~~~~in~Gs~~~---g------~~ 244 (260)
T 2yvt_A 185 IGEF-VD------RTPE--DPKHHGSAVVNTIIKSLNPEVAIVGHVGK-G-HELVGNTIVVNPGEFEE---G------RY 244 (260)
T ss_dssp SCSS-TT------CBTT--BSCCCSCHHHHHHHHHHCCSEEEECSSCC-E-EEEETTEEEEECCBGGG---T------EE
T ss_pred cccc-cc------cCcc--cccccCcHHHHHHHHHhCCCEEEECCccC-C-cEEeCCEEEEeCCCCCC---C------ce
Confidence 4310 00 0000 00123446667777766799999999993 3 33456666665555442 1 46
Q ss_pred EEEEEe
Q 015684 334 RVVVAS 339 (402)
Q Consensus 334 rv~ei~ 339 (402)
-+++++
T Consensus 245 ~ii~~~ 250 (260)
T 2yvt_A 245 AFLDLT 250 (260)
T ss_dssp EEEETT
T ss_pred EEEEEc
Confidence 666664
No 11
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.72 E-value=5.6e-17 Score=153.26 Aligned_cols=251 Identities=16% Similarity=0.079 Sum_probs=122.3
Q ss_pred CCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHHHH
Q 015684 40 QNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAF 117 (402)
Q Consensus 40 ~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l 117 (402)
+...|||+|+||+|+|......... ..+.. .....++.+.+.+++++||+||++||++++.+.+ ...+.+.+.+
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~--~~r~~--~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l 90 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRP--VDRRE--ELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYL 90 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCC--EECHH--HHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccC--cChhH--HHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHH
Confidence 4568999999999998321000000 00000 0123456666677778999999999944444333 2334556667
Q ss_pred hHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEe
Q 015684 118 APAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLD 197 (402)
Q Consensus 118 ~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lD 197 (402)
..+.+. +|+++++||||... . ....+.+.....+...+.... ... ...+.+ ..+.++.++
T Consensus 91 ~~L~~~-~pv~~i~GNHD~~~-~--~~~~~~l~~~g~nv~v~~~~~--~~~-----~~~~~~---------~~v~i~glp 150 (336)
T 2q8u_A 91 KRMMRT-APVVVLPGNHDWKG-L--KLFGNFVTSISSDITFVMSFE--PVD-----VEAKRG---------QKVRILPFP 150 (336)
T ss_dssp HHHHHH-SCEEECCC-------C--HHHHHHHHHHCSSEEECCSSS--CEE-----EECTTS---------CEEEEEEEC
T ss_pred HHHHhc-CCEEEECCCCCccc-c--ccHHHHHHhcCCEEEEEeccc--ccC-----ceEEeC---------CCEEEEECC
Confidence 666544 89999999999865 2 222233322110011110000 000 000000 126677776
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCC
Q 015684 198 SGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASV 277 (402)
Q Consensus 198 s~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~ 277 (402)
......... ..+....++++|+.+.+..-.. ..+.+.|+++|+|+....... +.. .+..
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~Ill~H~~~~~~~~~~-----~~~--~~~~--- 209 (336)
T 2q8u_A 151 YPDESEALR--KNEGDFRFFLESRLNKLYEEAL---------KKEDFAIFMGHFTVEGLAGYA-----GIE--QGRE--- 209 (336)
T ss_dssp CC---------CCSSHHHHHHHHHHHHHHHHHH---------TCSSEEEEEEESEETTCC---------------CC---
T ss_pred CCCHHHHHH--HhhHHHHHHHHHHHHHHHHhcc---------CCCCCEEEEECccccCCCCCC-----Ccc--chhh---
Confidence 421100000 0122345677887776542110 156689999999985321000 000 0000
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
. .+-..+ ...+++++++||+|..... . .+..++|+|+.....++..+..+|+-+++++
T Consensus 210 ~-~v~~~l-~~~~~d~v~~GH~H~~~~~-~-~~~~i~y~GS~~~~s~~e~~~~~~~~lv~i~ 267 (336)
T 2q8u_A 210 I-IINRAL-IPSVVDYAALGHIHSFREI-Q-KQPLTIYPGSLIRIDFGEEADEKGAVFVELK 267 (336)
T ss_dssp C-EECGGG-SCTTSSEEEEESCSSCEEE-E-ETTEEEECCCSSCCSGGGTTCCCEEEEEEEE
T ss_pred c-ccCHHH-ccccCCEEEEccccCceEe-C-CCccEEECCCCcCCCccccCCCCEEEEEEEe
Confidence 0 000112 2346999999999995433 2 3346777776633333333346899999987
No 12
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.70 E-value=8.2e-16 Score=147.89 Aligned_cols=227 Identities=15% Similarity=0.115 Sum_probs=121.1
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~~~l~ 118 (402)
...|||+|+||+|++....... .+.. .....++.+.+.+.+.+||+||++|| +++.+.+ .....+.+.+.
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~-----~r~~--~~~~~l~~~v~~~~~~~~D~VliaGD-l~d~~~p~~~~~~~~~~~l~ 89 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLD-----DREK--DIYDSFKLCIKKILEIKPDVVLHSGD-LFNDLRPPVKALRIAMQAFK 89 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCH-----HHHH--HHHHHHHHHHHHHHTTCCSEEEECSC-SBSSSSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcc-----hhhH--HHHHHHHHHHHHHHHcCCCEEEECCC-CCCCCCCCHHHHHHHHHHHH
Confidence 3579999999999985321100 0000 00123455555566789999999999 5555433 34445666777
Q ss_pred HhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeC
Q 015684 119 PAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDS 198 (402)
Q Consensus 119 ~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs 198 (402)
.+...++|+++|+||||........ .+. ..+ ......+.+ ..+ .+.. ...+.++.++.
T Consensus 90 ~L~~~~~pv~~v~GNHD~~~~~~~~--------~~~--~~l-~~~v~~l~~-~~v--~~~~--------~~~v~i~gl~~ 147 (386)
T 3av0_A 90 KLHENNIKVYIVAGNHEMPRRLGEE--------SPL--ALL-KDYVKILDG-KDV--INVN--------GEEIFICGTYY 147 (386)
T ss_dssp HHHHTTCEEEECCCGGGSCSSTTSC--------CGG--GGG-TTTCEECSE-EEE--EEET--------TEEEEEEEECC
T ss_pred HHHhcCCcEEEEcCCCCCCcccccc--------CHH--HHH-HHHeEEcCC-CcE--EEeC--------CCCEEEEeCCC
Confidence 6666689999999999985432100 000 000 000011111 011 1110 01266777776
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCC
Q 015684 199 GDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVN 278 (402)
Q Consensus 199 ~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~ 278 (402)
.. .....+..+|++. +.... ..+.+.|+++|+|+..+.+ +... . .
T Consensus 148 ~~----------~~~~~~~~~~l~~----l~~~~-------~~~~~~Ill~H~~~~~~~~-------~~~~--~-----~ 192 (386)
T 3av0_A 148 HK----------KSKREEMLDKLKN----FESEA-------KNYKKKILMLHQGINPYIP-------LDYE--L-----E 192 (386)
T ss_dssp CC----------STTHHHHHHHHHH----HHHHH-------HTCSSEEEEECCCCTTTSS-------SSCS--S-----C
T ss_pred CC----------HHHHHHHHHHHHH----hhhhc-------ccCCCEEEEECcCccccCC-------CCcc--c-----C
Confidence 21 1112233344432 22100 1467899999998844211 1110 0 0
Q ss_pred hHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCC----CCcceEEEEEe
Q 015684 279 SGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAG----WERRARVVVAS 339 (402)
Q Consensus 279 ~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~----~~~g~rv~ei~ 339 (402)
+..+ .+++++++||+|.. .....++..++|+|++....++..+ ..+|+-+++++
T Consensus 193 ---~~~l---~~~d~v~~GH~H~~-~~~~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~ 250 (386)
T 3av0_A 193 ---HFDL---PKFSYYALGHIHKR-ILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFS 250 (386)
T ss_dssp ---GGGS---CCCSEEEECSCCSC-EEEECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECC
T ss_pred ---HHHh---hhCCeEEccCCCCC-ccccCCCceEEECCcccccCcchhccccCCCCEEEEEEEe
Confidence 0111 23899999999984 4444567788888887433333211 24788888886
No 13
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.66 E-value=2e-15 Score=144.73 Aligned_cols=248 Identities=17% Similarity=0.174 Sum_probs=127.0
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh--hhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l~~~~ 121 (402)
|||+|+||+|++.......... ... ......++.+.+.+.+++||+||++||++.+... ...++.+.+.+..+.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~--~~~--~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~ 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPV--DRR--EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCE--ECH--HHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCc--Chh--HHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHH
Confidence 7999999999987521100000 000 0012345556666677899999999994414432 344556667777776
Q ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDY 201 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~ 201 (402)
.. +|+++|+||||... ..........++... ..+.....+.+. ..++ ..+.++.+.-..
T Consensus 77 ~~-~~v~~i~GNHD~~~---~~~~~~~~~~~~~~~--------~~~~~~~~v~l~--~~~G------~~v~i~glp~~~- 135 (379)
T 3tho_B 77 RT-APVVVLPGNQDWKG---LKLFGNFVTSISSDI--------TFVMSFEPVDVE--AKRG------QKVRILPFPYPD- 135 (379)
T ss_dssp HH-SCEEECCCTTSCTT---HHHHHHHHHTTCSSE--------EECCSSCCEEEE--CTTC------CEEEEEEECCCC-
T ss_pred hC-CCEEEEcCCCcccc---CccccccccccCCcc--------eeecccceEEEE--cCCC------CEEEEEECCCCC-
Confidence 66 99999999999532 111111111111110 011101111111 1111 114555554321
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHH
Q 015684 202 STVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGF 281 (402)
Q Consensus 202 ~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 281 (402)
+.. .......++.+|+.+.++++.... ...+.+.|++.|.++....... .....+.. ...
T Consensus 136 ---~~~-~~~~~~~~~~~~l~~~l~~~~~~~------~~~~~~~I~l~H~~v~g~~~~~------~se~~~~~-~v~--- 195 (379)
T 3tho_B 136 ---ESE-ALRKNEGDFRFFLESRLNKLYEEA------LKKEDFAIFMGHFTVEGLAGYA------GIEQGREI-IIN--- 195 (379)
T ss_dssp ---CC-----CHHHHHHHHHHHHHHHHHHHH------HTCSSEEEEEEESCBSCCCC-------------CSC-CBC---
T ss_pred ---HHH-HhhhhccchHHHHHHHHHHHHHHh------cCCCCCeEEEEeccccCCccCC------CCcccccc-ccC---
Confidence 100 011245678889988876432110 0256788999999884321100 00000000 000
Q ss_pred HHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEee
Q 015684 282 FTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVASL 340 (402)
Q Consensus 282 l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~~ 340 (402)
..++ ..+++++++||+|..... .++..+.|+|+.....++..+..+|+-+++++.
T Consensus 196 -~~~~-~~~~dyvalGH~H~~q~~--~~~~~i~y~GS~~~~~f~E~~~~k~~~lv~~~~ 250 (379)
T 3tho_B 196 -RALI-PSVVDYAALGHIHSFREI--QKQPLTIYPGSLIRIDFGEEADEKGAVFVELKR 250 (379)
T ss_dssp -GGGS-CTTSSEEEEESCSSCEEE--EETTEEEECCCSSCCSGGGSSSCCEEEEEECCS
T ss_pred -HHHc-CcCCCEEEcccccCCeEe--CCCCcEEecCCCCCCCcccccCCCEEEEEEEcC
Confidence 1222 246999999999995221 222467888877433444444568889988863
No 14
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.61 E-value=1.6e-14 Score=138.82 Aligned_cols=94 Identities=21% Similarity=0.319 Sum_probs=62.1
Q ss_pred eecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--hHHHHHH
Q 015684 37 RFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT--DAAKSLN 114 (402)
Q Consensus 37 ~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~--~~~~~~~ 114 (402)
....++.|||+|+||+|++.......+.. ....+++.+.+.+.+++||+||++|| +++...+ .....+.
T Consensus 26 ~~~~~~~mrilhiSDlHLg~~~~~~~~~~--------d~~~~l~~ll~~~~~~~~D~VliaGD-lfd~~~~~~~~~~~~~ 96 (431)
T 3t1i_A 26 ALDDENTFKILVATDIHLGFMEKDAVRGN--------DTFVTLDEILRLAQENEVDFILLGGD-LFHENKPSRKTLHTCL 96 (431)
T ss_dssp -CCGGGEEEEEEECCCCBTTTSSCTTTTT--------HHHHHHHHHHHHHHHTTCSEEEECSC-CBSSSSCCHHHHHHHH
T ss_pred CCCCCCCEEEEEEeccCCCCcccccchhh--------hHHHHHHHHHHHHhhcCCCEEEEcCc-cccCCCCCHHHHHHHH
Confidence 33456789999999999997543211100 01234566666677899999999999 5555432 3444555
Q ss_pred HHHhHhH---------------------------------hCCCCEEEEcCCCCCCCC
Q 015684 115 AAFAPAI---------------------------------ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 115 ~~l~~~~---------------------------------~~~iP~~~v~GNHD~~~~ 139 (402)
+.+..+. +.++|+++|+||||....
T Consensus 97 ~~L~r~~~~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g 154 (431)
T 3t1i_A 97 ELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTG 154 (431)
T ss_dssp HHHHHHHBCSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBT
T ss_pred HHHHHHhccCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCccc
Confidence 5555432 248999999999998653
No 15
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.58 E-value=2e-13 Score=128.68 Aligned_cols=87 Identities=23% Similarity=0.297 Sum_probs=57.2
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCCh--hhHHHHHHHHHhHhH
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDA--TDAAKSLNAAFAPAI 121 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~--~~~~~~~~~~l~~~~ 121 (402)
|||+|+||+|++...... +.... .....++.+.+.+.+++||+||++||+ ++... ......+.+.+..+.
T Consensus 1 mkilh~sD~Hlg~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~D~vl~~GDl-~d~~~~~~~~~~~~~~~l~~l~ 72 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHK-----PQREE--EFAEAFKNALEIAVQENVDFILIAGDL-FHSSRPSPGTLKKAIALLQIPK 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGC-----HHHHH--HHHHHHHHHHHHHHHTTCSEEEEESCS-BSSSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccCCCCcccCC-----chhhH--HHHHHHHHHHHHHHhcCCCEEEECCCc-CCCCCCCHHHHHHHHHHHHHHH
Confidence 799999999998542100 00000 001234455566667899999999995 44432 234555667777766
Q ss_pred hCCCCEEEEcCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQES 138 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~ 138 (402)
+.++|+++|+||||...
T Consensus 73 ~~~~~v~~v~GNHD~~~ 89 (333)
T 1ii7_A 73 EHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp TTTCCEEEECCTTTCCS
T ss_pred HCCCcEEEeCCcCCCcc
Confidence 66899999999999864
No 16
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.58 E-value=4.7e-14 Score=134.97 Aligned_cols=93 Identities=23% Similarity=0.319 Sum_probs=57.2
Q ss_pred ecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh--HHHHHHH
Q 015684 38 FRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNA 115 (402)
Q Consensus 38 ~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~ 115 (402)
......|||+|+||+|++.......+. .....+++.+.+.+.+++||+||++|| +++.+.+. ....+.+
T Consensus 8 ~~~~~~mrilhiSDlHLg~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGD-Lfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 8 LHNENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGD-IFHDNKPSRKALYQALR 78 (417)
T ss_dssp --CTTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSC-CBSSSSCCHHHHHHHHH
T ss_pred CCCCCCeEEEEEEcCCCCCcccccccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCc-cccCCCCCHHHHHHHHH
Confidence 345678999999999999654321100 001234566667777799999999999 55554332 2222333
Q ss_pred HHhH------------hH---------------------hCCCCEEEEcCCCCCCCC
Q 015684 116 AFAP------------AI---------------------ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 116 ~l~~------------~~---------------------~~~iP~~~v~GNHD~~~~ 139 (402)
.+.. +. +.++|+++++||||....
T Consensus 79 ~lr~~~~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~ 135 (417)
T 4fbw_A 79 SLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG 135 (417)
T ss_dssp HHHHHHBSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC---
T ss_pred HHHHhcccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccc
Confidence 3332 11 248999999999998543
No 17
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=99.58 E-value=6.5e-14 Score=139.30 Aligned_cols=213 Identities=14% Similarity=0.228 Sum_probs=119.4
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh--------------
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT-------------- 107 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~-------------- 107 (402)
.+++|+++||.+...+. .++ +.. +.+.+|||||++||+|+.++..
T Consensus 115 ~~~rfa~~sc~~~~~g~-----------------~~~---~~~-ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~ 173 (527)
T 2yeq_A 115 PQMTFAFASCQQYEHGY-----------------YTA---YKH-MAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNS 173 (527)
T ss_dssp CCEEEEEECCCCGGGCC-----------------CHH---HHH-HTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSS
T ss_pred CCeEEEEEecCCCCCCc-----------------cHH---HHH-HHhcCCCEEEecCCcccCCCCCcccccccccccCCc
Confidence 57999999999974322 122 223 3347999999999999887531
Q ss_pred ------hHHH-HHHH-----HHhHhHhCCCCEEEEcCCCCCCCCCCHH-----------------HHHHHHHhcCCcccc
Q 015684 108 ------DAAK-SLNA-----AFAPAIASNIPWVAVLGNHDQESTLSRE-----------------GVMKHIVTLKNTLSQ 158 (402)
Q Consensus 108 ------~~~~-~~~~-----~l~~~~~~~iP~~~v~GNHD~~~~~~~~-----------------~~~~~~~~~~~~~~~ 158 (402)
+.|+ .+.+ .++.+ ...+|+++++||||+.++.... .+..++..+|.....
T Consensus 174 ~e~~tl~~yr~~y~~~~~dp~lq~~-~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~ 252 (527)
T 2yeq_A 174 AEIITLQDYRNRHAQYRSDANLKAA-HAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISS 252 (527)
T ss_dssp SSCCSHHHHHHHHHHHHTCHHHHHH-HHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGG
T ss_pred ccccCHHHHHHHHHHHhCCHHHHHH-HhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCccc
Confidence 1111 1111 12222 2468999999999997653211 111222222211000
Q ss_pred cCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCCCCCCCC-------------CCCCCCCCHHHHHHHHHHH
Q 015684 159 VNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGDYSTVPS-------------VPGYGWIKPSQQFWFEQTS 225 (402)
Q Consensus 159 ~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~~~~~~~-------------~~~~g~i~~~q~~Wl~~~l 225 (402)
.|.+ ....-+|++.+++ .+.+++||+..|..... .+....+..+|++||++.|
T Consensus 253 -~p~~---~~~~~y~sf~~G~----------lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L 318 (527)
T 2yeq_A 253 -LPNG---PDMQLYRHFTYGN----------LASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNL 318 (527)
T ss_dssp -CCBT---TBCCCCEEEEETT----------TEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHH
T ss_pred -CCCC---CCceEEEEEEcCC----------cceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHH
Confidence 0110 1112356777755 27899999976644321 1122357899999999987
Q ss_pred HHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCe--eEEEeccCCCCc
Q 015684 226 ARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDV--KAVFTGHDHVND 303 (402)
Q Consensus 226 ~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v--~~v~~GH~H~~~ 303 (402)
++ ....++||++|+|+........... ....+.........+.+..++.+++| .++|+||+|...
T Consensus 319 ~~------------s~a~W~Iv~s~~p~~~~~~~~g~~~-~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~ 385 (527)
T 2yeq_A 319 GS------------STAHWNVLAQQIFFAKWNFGTSASP-IYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASW 385 (527)
T ss_dssp HH------------CCSSEEEEECSSCCSCCCSSCSSSC-CEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEE
T ss_pred hc------------CCCCeEEEEeCCcccccccCCCccc-ccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHh
Confidence 63 2567999999999965311100000 00111111001123455566666667 499999999954
No 18
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.56 E-value=8.1e-14 Score=120.68 Aligned_cols=58 Identities=12% Similarity=0.007 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCC--CCCCCcceEEEEEe
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYG--KAGWERRARVVVAS 339 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~--~~~~~~g~rv~ei~ 339 (402)
..+..+++..+++++++||+|.. .....+|+.++..|+.+.. ++ .....+++.+++++
T Consensus 107 ~~l~~~~~~~~~d~vi~GHtH~~-~~~~~~~~~~inpGS~~~~-~~~~~~~~~~~y~il~~~ 166 (192)
T 1z2w_A 107 ASLALLQRQFDVDILISGHTHKF-EAFEHENKFYINPGSATGA-YNALETNIIPSFVLMDIQ 166 (192)
T ss_dssp HHHHHHHHHHSSSEEECCSSCCC-EEEEETTEEEEECCCTTCC-CCSSCSCCCCEEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCcCcC-ccEeECCEEEEECCccccc-CCCCCcCCCCcEEEEEEE
Confidence 34555655557999999999994 4556688888877776532 11 11235789999987
No 19
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.54 E-value=1.8e-13 Score=131.84 Aligned_cols=90 Identities=23% Similarity=0.317 Sum_probs=57.8
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhh--HHHHHHHHHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATD--AAKSLNAAFA 118 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~--~~~~~~~~l~ 118 (402)
.+.|||+|+||+|++.......+. .....+++.+.+.+.+.+||+||++|| +++.+.+. ....+.+.+.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~--------~d~~~~l~~lv~~~~~~~~D~VliaGD-Lfd~~~ps~~a~~~~~~~Lr 144 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRG--------NDSFVSFNEILEIARERDVDMILLGGD-IFHDNKPSRKALYQALRSLR 144 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTT--------THHHHHHHHHHHHHHHTTCSEEEECSC-SBSSSSCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEecccCCCcccCcccc--------hhHHHHHHHHHHHHHhcCCCEEEEcCc-cccCCCCCHHHHHHHHHHHH
Confidence 467999999999998654321100 001234566667777799999999999 55554432 2222233333
Q ss_pred H------------hH---------------------hCCCCEEEEcCCCCCCCC
Q 015684 119 P------------AI---------------------ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 119 ~------------~~---------------------~~~iP~~~v~GNHD~~~~ 139 (402)
. +. +.++|+++++||||....
T Consensus 145 ~~~~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~ 198 (472)
T 4fbk_A 145 LNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSG 198 (472)
T ss_dssp HHHBSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC
T ss_pred HhcccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccc
Confidence 2 11 248999999999998654
No 20
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.53 E-value=4.6e-13 Score=118.02 Aligned_cols=59 Identities=14% Similarity=-0.034 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCCC-CCCCCCcceEEEEEe
Q 015684 280 GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAY-GKAGWERRARVVVAS 339 (402)
Q Consensus 280 ~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y-~~~~~~~g~rv~ei~ 339 (402)
..+..+++..+++++++||+|.. .....+|+.++..|+.+..-. ...+..++|.+++++
T Consensus 131 ~~l~~~~~~~~~d~vl~GHtH~~-~~~~~~~~~~inpGS~~~~~~~~~~~~~~~y~il~i~ 190 (215)
T 2a22_A 131 GSLEQWQRRLDCDILVTGHTHKL-RVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQ 190 (215)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCC-EEEEETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEE
T ss_pred HHHHHHHhhcCCCEEEECCcCCC-ccEeeCCEEEEECCcccccCCCCCCCCCCcEEEEEEe
Confidence 44556665557999999999994 445568888887777653211 112245789999987
No 21
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.52 E-value=2.6e-13 Score=123.90 Aligned_cols=68 Identities=18% Similarity=0.258 Sum_probs=48.2
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
.+.|||+++||+|..... + +..++|+||++|| +++.+..+.++.+.+.++.+
T Consensus 57 ~~~mri~~iSD~H~~~~~-----------------------l----~i~~~D~vi~aGD-l~~~g~~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG-----------------------I----QMPYGDILLHTGD-FTELGLPSEVKKFNDWLGNL 108 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT-----------------------C----CCCSCSEEEECSC-CSSSCCHHHHHHHHHHHHTS
T ss_pred CCCeEEEEEeeCCCCcch-----------------------h----ccCCCCEEEECCc-ccCCCCHHHHHHHHHHHHhC
Confidence 467999999999975321 1 1257999999999 66666655555555655542
Q ss_pred HhCCCCEEEEcCCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQES 138 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~ 138 (402)
...|+++|+||||...
T Consensus 109 --~~~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 109 --PYEYKIVIAGNHELTF 124 (296)
T ss_dssp --CCSEEEECCCTTCGGG
T ss_pred --CCCeEEEEcCCccccc
Confidence 1246999999999853
No 22
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.51 E-value=9.6e-15 Score=132.12 Aligned_cols=103 Identities=9% Similarity=0.037 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcC-C
Q 015684 212 WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAG-D 290 (402)
Q Consensus 212 ~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~-~ 290 (402)
.+++++++||++....+. ...+...|+++|+++... .+ +.. .+..+.+.+..+++.. +
T Consensus 109 ~l~~~~~~~L~~lp~~~~---------~~~~~~~i~~~H~~p~~~--~~---------~~~-~~~~~~~~l~~~~~~~~~ 167 (252)
T 1nnw_A 109 KLGHEGREYLRDLPIYLV---------DKIGGNEVFGVYGSPINP--FD---------GEV-LAEQPTSYYEAIMRPVKD 167 (252)
T ss_dssp HHHHHHHHHHHTSCSCEE---------EEETTEEEEEESSCSSCT--TT---------CCC-CSSCCHHHHHHHHGGGTT
T ss_pred HCCHHHHHHHHhCCceEE---------EeeCCcEEEEEcCCCCCC--cc---------ccc-CCCCCHHHHHHHHhcCCC
Confidence 356777888765211000 001235789999976221 10 000 0112345566677665 7
Q ss_pred eeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEE
Q 015684 291 VKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVA 338 (402)
Q Consensus 291 v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei 338 (402)
+++++|||+|. ......+|+.++..|+.|..--+ ....++-++++
T Consensus 168 ~~~vi~GHtH~-~~~~~~~~~~~in~Gs~~~~~~~--~~~~~y~il~~ 212 (252)
T 1nnw_A 168 YEMLIVASPMY-PVDAMTRYGRVVCPGSVGFPPGK--EHKATFALVDV 212 (252)
T ss_dssp SSEEEESTTCS-EEEEEETTEEEEEECCSSSCSSS--SCCEEEEEEET
T ss_pred CCEEEECCccc-cceEecCCeEEEECCCccCCCCC--CCcceEEEEEC
Confidence 99999999999 45556788887777776643211 12345555554
No 23
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.47 E-value=5.3e-14 Score=128.33 Aligned_cols=204 Identities=12% Similarity=0.034 Sum_probs=107.9
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
....||+++||+|.. ...++.+.+.++..++|.|+++||++ +.+... ....+.+.
T Consensus 9 ~~~~~i~~iSDiHg~--------------------~~~l~~vl~~~~~~~~D~ii~~GDlv-~~g~~~--~~~~~~l~-- 63 (270)
T 3qfm_A 9 MDMTKIALLSDIHGN--------------------TTALEAVLADARQLGVDEYWLLGDIL-MPGTGR--RRILDLLD-- 63 (270)
T ss_dssp --CEEEEEECCCTTC--------------------HHHHHHHHHHHHHTTCCEEEECSCCS-SSSSCS--HHHHHHHH--
T ss_pred ccccEEEEEecCCCC--------------------HHHHHHHHHHHHhcCCCEEEEcCCCC-CCCCCH--HHHHHHHH--
Confidence 467899999999932 23345555666667899999999954 443221 12223333
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccCCCCCccccccccceEEeccCCCCCCCCceeEEEEEEeCCC
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVNPSDAHIIDGFGNYNLEIGGVKGSGFENKSVLNLYFLDSGD 200 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~l~~lDs~~ 200 (402)
+. .|+++|+||||.. +.+.... . .... .....+. . ....
T Consensus 64 -~~-~~~~~v~GNhD~~-------~~~~~~~---~---~~~~-----~~~~~~~---~------------------~~~~ 102 (270)
T 3qfm_A 64 -QL-PITARVLGNWEDS-------LWHGVRK---E---LDST-----RPSQRYL---L------------------RQCQ 102 (270)
T ss_dssp -TS-CEEEECCCHHHHH-------HHHHHTT---C---SCTT-----SHHHHHH---H------------------HHHH
T ss_pred -cc-CCEEEEcCChHHH-------HHHhhcc---c---cCCC-----cHHHHHH---H------------------HHHH
Confidence 22 3799999999962 1111100 0 0000 0000000 0 0000
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChH
Q 015684 201 YSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSG 280 (402)
Q Consensus 201 ~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 280 (402)
+ ....+++++++||+..-..+. ..-+...|+++|..+.. .+ .+.+ .+....+
T Consensus 103 ~-------~~~~L~~~~~~~L~~LP~~~~---------~~~~g~~i~lvHg~p~~---~~--------~~~~-~~~~~~~ 154 (270)
T 3qfm_A 103 Y-------VLEEISLEEIEVLHNQPLQIH---------RQFGDLTVGISHHLPDK---NW--------GREL-IHTGKQE 154 (270)
T ss_dssp H-------HHTTSCHHHHHHHHSCCSEEE---------EEETTEEEEEESSBTTB---SS--------SSTT-STTCCHH
T ss_pred H-------HHHHcCHHHHHHHHhCCCceE---------EEECCcEEEEEECCCCC---CC--------Ccee-cCCCcHH
Confidence 0 023478889999876311000 00133467888974422 11 0000 1112345
Q ss_pred HHHHHHHcCCeeEEEeccCCCCccccc-CCCeeEEecCCccCCCCCCC----CCCcceEEEEEe
Q 015684 281 FFTTMVAAGDVKAVFTGHDHVNDFCGR-LTGIQLCYGGGFGYHAYGKA----GWERRARVVVAS 339 (402)
Q Consensus 281 ~l~~l~~~~~v~~v~~GH~H~~~~~~~-~~gi~~~~~~~~g~~~y~~~----~~~~g~rv~ei~ 339 (402)
.+..+++..+++++++||+|.+ .... .+|+.++..||.|....+.+ +....|-+++++
T Consensus 155 ~l~~~~~~~~~d~~i~GHtH~~-~~~~~~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~ 217 (270)
T 3qfm_A 155 EFDRLVTHPPCDIAVYGHIHQQ-LLRYGTGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFD 217 (270)
T ss_dssp HHHHTTTTTTCSEEECCSSCSE-EEEECTTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEE
T ss_pred HHHHHhcccCCCEEEECCcCch-HheeccCCEEEEECCCccCCCCCCccccCCCCCEEEEEEec
Confidence 5677776668999999999984 4444 47888888888775433311 123556677665
No 24
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.42 E-value=7.4e-12 Score=107.90 Aligned_cols=66 Identities=23% Similarity=0.270 Sum_probs=44.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
++.|||+++||+|.. ...++.+.+.++..++|+|+++||+ .+. +.++.+
T Consensus 23 ~g~m~i~~iSD~Hg~--------------------~~~l~~~l~~~~~~~~D~ii~~GDl-~~~----------~~~~~l 71 (190)
T 1s3l_A 23 QGHMKIGIMSDTHDH--------------------LPNIRKAIEIFNDENVETVIHCGDF-VSL----------FVIKEF 71 (190)
T ss_dssp ---CEEEEECCCTTC--------------------HHHHHHHHHHHHHSCCSEEEECSCC-CST----------HHHHHG
T ss_pred cCCeEEEEEeeCCCC--------------------HHHHHHHHHHHhhcCCCEEEECCCC-CCH----------HHHHHH
Confidence 456999999999921 1233445555666799999999995 431 122333
Q ss_pred HhCCCCEEEEcCCCCCC
Q 015684 121 IASNIPWVAVLGNHDQE 137 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~ 137 (402)
.+.+.|+++|+||||..
T Consensus 72 ~~l~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 72 ENLNANIIATYGNNDGE 88 (190)
T ss_dssp GGCSSEEEEECCTTCCC
T ss_pred HhcCCCEEEEeCCCcch
Confidence 33478999999999974
No 25
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.41 E-value=9.1e-12 Score=106.09 Aligned_cols=74 Identities=15% Similarity=-0.010 Sum_probs=49.5
Q ss_pred CeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCCC
Q 015684 244 PGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHA 323 (402)
Q Consensus 244 ~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~ 323 (402)
..|+++|+|+... + .+...+..+++..+++++++||+|.. .....+|+.++..|+.+..-
T Consensus 78 ~~i~~~Hg~~~~~---~----------------~~~~~l~~~~~~~~~d~vi~GHtH~~-~~~~~~~~~~inpGs~~~~~ 137 (176)
T 3ck2_A 78 TKIIQTHGHLFDI---N----------------FNFQKLDYWAQEEEAAICLYGHLHVP-SAWLEGKILFLNPGSISQPR 137 (176)
T ss_dssp EEEEEECSGGGTT---T----------------TCSHHHHHHHHHTTCSEEECCSSCCE-EEEEETTEEEEEECCSSSCC
T ss_pred eEEEEECCCccCC---C----------------CCHHHHHHHHHhcCCCEEEECCcCCC-CcEEECCEEEEECCCCCcCC
Confidence 4788999977431 0 12344566666678999999999994 55566888888777766432
Q ss_pred CCCCCCCcceEEEEEe
Q 015684 324 YGKAGWERRARVVVAS 339 (402)
Q Consensus 324 y~~~~~~~g~rv~ei~ 339 (402)
.+ ...+++.+++++
T Consensus 138 ~~--~~~~~y~il~~~ 151 (176)
T 3ck2_A 138 GT--IRECLYARVEID 151 (176)
T ss_dssp TT--CCSCCEEEEEEC
T ss_pred CC--CCCCeEEEEEEc
Confidence 11 123689999986
No 26
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.39 E-value=1.3e-12 Score=113.34 Aligned_cols=81 Identities=15% Similarity=0.118 Sum_probs=49.4
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--cCCCEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
.|||+++||+|++....... ..+. ......+.+.+.+++ .++|+|+++||++. .+ . .+..+.+.++.
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~-~~~~------~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~-~~-~-~~~~~~~~l~~- 69 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINL-NPEV------RFKGFEIVILTNLLKVLKPEDTLYHLGDFTW-HF-N-DKNEYLRIWKA- 69 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHH-STTT------CCTTHHHHHHHHHHTTCCTTCEEEECSCCBS-CS-C-CTTSHHHHHHH-
T ss_pred CcEEEEEeccccCCCccccc-cCCC------CHHHHHHHHHHHHHHhCCCCCEEEECCCCCC-Cc-h-hHHHHHHHHHH-
Confidence 47899999999975431110 0000 012334555566655 48999999999544 33 1 12223344443
Q ss_pred HhCCCCEEEEcCCCCC
Q 015684 121 IASNIPWVAVLGNHDQ 136 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~ 136 (402)
.+.|+++|+||||.
T Consensus 70 --l~~~~~~v~GNhD~ 83 (195)
T 1xm7_A 70 --LPGRKILVMGNHDK 83 (195)
T ss_dssp --SSSEEEEECCTTCC
T ss_pred --CCCCEEEEeCCCCC
Confidence 45689999999997
No 27
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.35 E-value=1.7e-12 Score=116.85 Aligned_cols=81 Identities=19% Similarity=0.122 Sum_probs=49.7
Q ss_pred CCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHcCCe
Q 015684 212 WIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAAGDV 291 (402)
Q Consensus 212 ~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~~~v 291 (402)
.+++++++||+.. ... .....++++|.++.... + +. ..+...+..+++..++
T Consensus 92 ~l~~~~~~~L~~l----p~~---------~~~~~i~~~Hg~p~~~~--~---------~~----~~~~~~~~~~l~~~~~ 143 (246)
T 3rqz_A 92 QLQAEHLQYLESL----PNR---------MIDGDWTVVHGSPRHPI--W---------EY----IYNARIAALNFPAFDT 143 (246)
T ss_dssp HCCHHHHHHHHHC----CSE---------EEETTEEEESSCSSSTT--T---------CC----CCSHHHHHHHGGGCCS
T ss_pred HcCHHHHHHHHhC----CcE---------EEECCEEEEECCcCCcc--c---------cc----cCChHHHHHHHhccCC
Confidence 3678889999863 110 11236889998653310 0 00 1133455666777789
Q ss_pred eEEEeccCCCCccccc---------------------CCCeeEEecCCccC
Q 015684 292 KAVFTGHDHVNDFCGR---------------------LTGIQLCYGGGFGY 321 (402)
Q Consensus 292 ~~v~~GH~H~~~~~~~---------------------~~gi~~~~~~~~g~ 321 (402)
+++||||+|.+ +... ..|..++..||.|.
T Consensus 144 ~l~i~GHtH~p-~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~ 193 (246)
T 3rqz_A 144 PLCFVGHTHVP-LYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQ 193 (246)
T ss_dssp SEEECCSSSSE-EEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSC
T ss_pred CEEEECCcCcc-cEEEecccccccccccccccceeecCCCeEEEECCccCC
Confidence 99999999984 3322 23677777777774
No 28
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.28 E-value=1.8e-11 Score=107.09 Aligned_cols=81 Identities=19% Similarity=0.280 Sum_probs=46.7
Q ss_pred CCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChh----
Q 015684 32 QERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDAT---- 107 (402)
Q Consensus 32 ~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~---- 107 (402)
.++.+.|.....|||+++||+|... ..++.+.+.++..++|+|+++||+ .+.+..
T Consensus 14 ~~~~~~~~~~~mmki~~iSD~H~~~--------------------~~l~~~l~~~~~~~~d~vi~~GDl-~~~g~~~~~~ 72 (208)
T 1su1_A 14 GTENLYFQSNAMMKLMFASDIHGSL--------------------PATERVLELFAQSGAQWLVILGDV-LNHGPRNALP 72 (208)
T ss_dssp -----------CCEEEEECCCTTBH--------------------HHHHHHHHHHHHHTCSEEEECSCC-SCCCTTSCCC
T ss_pred CcccceecccccEEEEEEEcCCCCH--------------------HHHHHHHHHHHhcCCCEEEECCCc-cccCcccccc
Confidence 4456777777779999999999631 233445555556789999999994 443321
Q ss_pred hH--HHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 108 DA--AKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 108 ~~--~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.. ...+.+.+. +.+.|+++|+||||.
T Consensus 73 ~~~~~~~~~~~l~---~~~~~v~~V~GNHD~ 100 (208)
T 1su1_A 73 EGYAPAKVVERLN---EVAHKVIAVRGNCDS 100 (208)
T ss_dssp TTBCHHHHHHHHH---TTGGGEEECCCTTCC
T ss_pred cccCHHHHHHHHH---hcCCceEEEECCCch
Confidence 11 123333443 345699999999997
No 29
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=99.27 E-value=2.7e-10 Score=114.28 Aligned_cols=211 Identities=15% Similarity=0.084 Sum_probs=102.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHHHHHhH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAP 119 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~ 119 (402)
..+++|+|+||+|...... .+... ... ........+..+.+.++++.|| +++.+||++.+.. ...+..-...++.
T Consensus 27 ~~~l~Il~~~D~H~~~~~~-~~~~~-~~~-~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~ 102 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPV-ELTLS-GEK-TPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL-YFNQYRGLADRYF 102 (552)
T ss_dssp -CEEEEEEECCCTTCCSCE-EEECS-SSE-EEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH-HHHHHTTHHHHHH
T ss_pred CeeEEEEEEcccccCcccc-cccCc-ccc-cccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcH-HHHHhCCcHHHHH
Confidence 4579999999999643221 00000 000 0001223334455555667888 8899999655432 1111111122233
Q ss_pred hHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccC--CCCCccccc-cccc-eEEeccCCCCCCCCceeEEEEE
Q 015684 120 AIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN--PSDAHIIDG-FGNY-NLEIGGVKGSGFENKSVLNLYF 195 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g-~~~y-~~~~~~~~~~~~~~~~~~~l~~ 195 (402)
+...+.. ++++||||+... .+.+.+.+....+.+-..+ ..+.....+ ...| .+++.+ ..+.++.
T Consensus 103 ln~lg~d-~~~lGNHEfd~g--~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G---------~kIgiiG 170 (552)
T 2z1a_A 103 MHRLRYR-AMALGNHEFDLG--PGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGG---------ERVGIIG 170 (552)
T ss_dssp HHHTTCC-EEECCGGGGTTC--HHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETT---------EEEEEEE
T ss_pred HHhcCCC-ccccccccccCC--HHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECC---------EEEEEEE
Confidence 3334544 678999999653 4556666544332111100 000000000 1123 233333 2266777
Q ss_pred EeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCC
Q 015684 196 LDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSA 275 (402)
Q Consensus 196 lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~ 275 (402)
+.+...... ..+..++.-.+..+-+++.++++++. ....+|+++|.|....
T Consensus 171 ~~~~~~~~~-~~~~~~~~~~d~~~~~~~~v~~l~~~---------~~d~iIvL~H~g~~~d------------------- 221 (552)
T 2z1a_A 171 LTTPDTREI-SNPGPTVAFLDPYESAQKAVYELLAK---------GVNKIVVLSHLGYGED------------------- 221 (552)
T ss_dssp EECTTHHHH-SCCCTTCEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH-------------------
T ss_pred ecccchhhc-cCCCCCcEECCHHHHHHHHHHHHHhc---------CCCEEEEEeCCCcchH-------------------
Confidence 776321000 00001221112233355555556542 4668999999997431
Q ss_pred CCChHHHHHHHHc-CCeeEEEeccCCCCc
Q 015684 276 SVNSGFFTTMVAA-GDVKAVFTGHDHVND 303 (402)
Q Consensus 276 ~~~~~~l~~l~~~-~~v~~v~~GH~H~~~ 303 (402)
..+.+. .+|+++++||.|...
T Consensus 222 -------~~la~~~~gvDlIlgGHtH~~~ 243 (552)
T 2z1a_A 222 -------LKLARRLVGVQVIVGGHSHTLL 243 (552)
T ss_dssp -------HHHHTTCSSCCEEEECSSCCCB
T ss_pred -------HHHHHhCCCccEEEeCCcCccc
Confidence 123333 579999999999843
No 30
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.22 E-value=1.2e-10 Score=99.06 Aligned_cols=41 Identities=15% Similarity=0.169 Sum_probs=30.6
Q ss_pred CCeeEEEeccCCCCcccccCCCeeEEecCCccCCCCCCCCCCcceEEEEEe
Q 015684 289 GDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYHAYGKAGWERRARVVVAS 339 (402)
Q Consensus 289 ~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~~y~~~~~~~g~rv~ei~ 339 (402)
.+++++++||+|.. .....+|+.++..|+.+. +++-+++++
T Consensus 127 ~~~d~vi~GHtH~~-~~~~~~~~~~iNpGS~~~---------~sy~il~~~ 167 (178)
T 2kkn_A 127 EKPQVILFGHTHEP-EDTVKAGVRFLNPGSLAE---------GSYAVLELD 167 (178)
T ss_dssp SCCSEEECCSCSSC-CEEEETTEEEECCCCTTT---------TEEEEEEEE
T ss_pred cCCCEEEECccCCC-CeEEeCCEEEEECCCCCC---------CeEEEEEEC
Confidence 46899999999994 455567887777666553 467788886
No 31
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.99 E-value=3.4e-08 Score=98.89 Aligned_cols=188 Identities=12% Similarity=0.047 Sum_probs=88.4
Q ss_pred HHHHHHHHHhc--C--CC-EEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 79 TAFINRMISAE--K--PD-LIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 79 ~~~l~~~i~~~--~--pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
+..+.+.++++ + || ++|.+||++.+.. ...+..-...++.+...+.+++ + ||||+.. ..+.+.+.+....
T Consensus 107 la~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~lg~d~~-~-GNHEfd~--G~~~l~~~l~~~~ 181 (562)
T 2wdc_A 107 LTALIRDQKARVEAEGGKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLVGVDHM-V-SHWEWTL--GRERVEELLGLFR 181 (562)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHHTCCEE-C-CSGGGGG--CHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhhCCcEE-e-cchhccc--CHHHHHHHHHhCC
Confidence 33344444444 4 99 9999999655432 1111111122222334577765 6 9999854 3456666665543
Q ss_pred CcccccCC--CCCccccccccce-EEeccCCCCCCCCceeEEEEEEeCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 015684 154 NTLSQVNP--SDAHIIDGFGNYN-LEIGGVKGSGFENKSVLNLYFLDSGDYS-TVPSVPGYGWIKPSQQFWFEQTSARLQ 229 (402)
Q Consensus 154 ~~~~~~~p--~~~~~~~g~~~y~-~~~~~~~~~~~~~~~~~~l~~lDs~~~~-~~~~~~~~g~i~~~q~~Wl~~~l~~l~ 229 (402)
+.+-..+- ..... .....|. +++.+ ..+.++.+.+.... ..+.....++.-....+-+++.+++++
T Consensus 182 ~p~L~aNv~~~~~~~-~~~~py~i~e~~G---------~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 251 (562)
T 2wdc_A 182 GEFLSYNIVDDLFGD-PLFPAYRIHRVGP---------YALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKAR 251 (562)
T ss_dssp SEECCSSCEETTTCC-BSSCSEEEEEETT---------EEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCC-cccCCeEEEEECC---------eEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHH
Confidence 22111010 00000 0011232 23332 22567777652100 000000012111111233555555565
Q ss_pred HhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCCcCCCCCCChHHHHHHHHc-CCeeEEEeccCCCCcccc-c
Q 015684 230 RAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQEGISSASVNSGFFTTMVAA-GDVKAVFTGHDHVNDFCG-R 307 (402)
Q Consensus 230 ~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~l~~~-~~v~~v~~GH~H~~~~~~-~ 307 (402)
+. ....+|+++|.|.... ..+.+. .+|+++++||.|...... .
T Consensus 252 ~~---------~~d~iIvLsH~g~~~d--------------------------~~la~~~~giDlIlgGHtH~~~~~~~~ 296 (562)
T 2wdc_A 252 AE---------GANAVVLLSHNGMQLD--------------------------AALAERIRGIDLILSGHTHDLTPRPWR 296 (562)
T ss_dssp HT---------TCSEEEEEECSCHHHH--------------------------HHHHTTSSSCCEEEECSSCCCCSSCEE
T ss_pred HC---------CCCEEEEEeCCCCcch--------------------------HHHHhcCCCCcEEEeCCCCCCCccCEE
Confidence 42 4567899999997431 123333 579999999999843221 1
Q ss_pred CCCeeEEec
Q 015684 308 LTGIQLCYG 316 (402)
Q Consensus 308 ~~gi~~~~~ 316 (402)
.+++.++-+
T Consensus 297 ~~~t~vvqa 305 (562)
T 2wdc_A 297 VGKTWIVAG 305 (562)
T ss_dssp ETTEEEEEC
T ss_pred ECCEEEEec
Confidence 255555544
No 32
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.98 E-value=2.6e-08 Score=99.16 Aligned_cols=94 Identities=16% Similarity=0.071 Sum_probs=49.0
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh----cCC-CEEEEcCCccCCCChhh--HHHHHH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA----EKP-DLIVFTGDNIFGFDATD--AAKSLN 114 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~----~~p-D~vv~~GDli~~~~~~~--~~~~~~ 114 (402)
.+++|+|+||+|........ . +.....+..+.+.+++ .+| ++++.+||++.+..... ..+...
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~---------~-~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~ 76 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEY---------G-EYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDF 76 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTT---------S-CCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHH
T ss_pred eEEEEEEecccccCccCCCC---------C-CcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHH
Confidence 46999999999975322110 0 0112222223333332 246 79999999553321111 012233
Q ss_pred HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHh
Q 015684 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVT 151 (402)
Q Consensus 115 ~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~ 151 (402)
+.+.. .+. -++++||||+... .+.+.+.+..
T Consensus 77 ~~ln~---lg~-d~~~~GNHEfd~g--~~~l~~~~~~ 107 (516)
T 1hp1_A 77 RGMNL---VGY-DAMAIGNHEFDNP--LTVLRQQEKW 107 (516)
T ss_dssp HHHHH---HTC-CEEECCGGGGSSC--HHHHHHHHHH
T ss_pred HHHhc---cCC-CEEeeccccccCC--HHHHHHHHhh
Confidence 34443 354 4788999999654 3445555544
No 33
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.94 E-value=5.1e-08 Score=97.25 Aligned_cols=239 Identities=14% Similarity=0.066 Sum_probs=111.5
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHH-----HH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKS-----LN 114 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~-----~~ 114 (402)
..+++|+++||+|-.-.... +....+ ........+..+.+.++++.|+ +++.+||++.+. ....+.. ..
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~-~~~~~~---~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs-~~~~~~~~~~~~~~ 91 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTD-FTSRNQ---YQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGS-PFCNYLIAHSGSSQ 91 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCC-SSSTTC---CCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSS-HHHHHHHHTTCSSH
T ss_pred CCcEEEEEEeccCCCccCcc-cccCCC---cCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCc-HHHHHHhhcccCcc
Confidence 46899999999995432211 110000 0112233334444555566776 677799955432 2211110 12
Q ss_pred HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccccC--CCCCccccccccceEEeccCCCCCCCCceeEE
Q 015684 115 AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQVN--PSDAHIIDGFGNYNLEIGGVKGSGFENKSVLN 192 (402)
Q Consensus 115 ~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~g~~~y~~~~~~~~~~~~~~~~~~~ 192 (402)
..++.+...+.. ++++||||+... .+.+.+.+....+.+-..+ ..+ .......+..+++.+ ..+.
T Consensus 92 ~~~~~ln~lg~D-~~t~GNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~g-~p~~~~py~i~e~~G---------~kIg 158 (527)
T 3qfk_A 92 PLVDFYNRMAFD-FGTLGNHEFNYG--LPYLKDTLRRLNYPVLCANIYEND-STLTDNGVKYFQVGD---------QTVG 158 (527)
T ss_dssp HHHHHHHHTCCC-EECCCGGGGTTC--HHHHHHHHHHCSSCBCCSSEEETT-EESSSCSEEEEEETT---------EEEE
T ss_pred hHHHHHHhcCCc-EEeccccccccC--HHHHHHHHHhCCCCEEEeEeeeCC-CCccCCCEEEEEECC---------EEEE
Confidence 333333345665 467999998543 4556666655432211000 000 000011112223332 2256
Q ss_pred EEEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCC
Q 015684 193 LYFLDSGDYSTVPSVP--GYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE 270 (402)
Q Consensus 193 l~~lDs~~~~~~~~~~--~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~ 270 (402)
++.+.+....... .+ ..++.-.+..+.+++.++++++ ....+|+++|.+...... .|...+
T Consensus 159 viG~~~~~~~~~~-~~~~~~g~~~~d~~~~~~~~v~~l~~----------~~D~iIvl~H~G~~~d~~------~~~~~~ 221 (527)
T 3qfk_A 159 VIGLTTQFIPHWE-QPEHIQSLTFHSAFEILQQYLPEMKR----------HADIIVVCYHGGFEKDLE------SGTPTE 221 (527)
T ss_dssp EEEEECTTGGGTS-CHHHHTTEEECCHHHHHHHHHHHHHH----------HCSEEEEEEECCCSBCTT------TCCBSS
T ss_pred EEEeccCCccccc-CccccCCcEEcCHHHHHHHHHHHHHh----------CCCEEEEEeCcCcccccc------cCcccc
Confidence 7777663110000 00 0122222345667777777763 345688889987632100 111111
Q ss_pred cCCCCCCCh-HHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCC
Q 015684 271 GISSASVNS-GFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGG 318 (402)
Q Consensus 271 ~~~~~~~~~-~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~ 318 (402)
.+. ..+. ..+..-+. .+|+++++||.|. ......+++.++.+++
T Consensus 222 ~~~--~e~~~~~la~~~~-~giDlIlgGHtH~-~~~~~v~~~~ivqag~ 266 (527)
T 3qfk_A 222 VLT--GENEGYAMLEAFS-KDIDIFITGHQHR-QIAERFKQTAVIQPGT 266 (527)
T ss_dssp CCS--SSCCHHHHHHHHG-GGCSEEECCSSCC-EEEEEETTEEEEEECS
T ss_pred ccc--cchHHHHHHHhcC-CCCcEEEECCCCc-ccceEECCEEEeccCh
Confidence 100 0111 11222122 4699999999998 4445567777765543
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.89 E-value=2.1e-08 Score=100.43 Aligned_cols=209 Identities=16% Similarity=0.124 Sum_probs=99.4
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHHHHHHHHhHh
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
-+++|+|+||+|-.-...............+......+..+.+.++++.| +++|.+||++.+.. ......-...+..+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTI-WFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSH-HHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCch-hhhhhCChHHHHHH
Confidence 46999999999954332110000000000011233334444455556666 59999999655432 11111111223333
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHH-HHHHhcCCcccccCCCCCcccc--------ccccce-EEeccCCCCCCCCcee
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVM-KHIVTLKNTLSQVNPSDAHIID--------GFGNYN-LEIGGVKGSGFENKSV 190 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~--------g~~~y~-~~~~~~~~~~~~~~~~ 190 (402)
...+.. ++++||||+... .+.+. +++....+.+ + ........ ....|. ++..+ ..
T Consensus 103 n~lg~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~--l-~aNv~~~~~~~p~~~~~~~~~~i~~~~G---------~k 167 (546)
T 4h2g_A 103 NALRYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPI--L-SANIKAKGPLASQISGLYLPYKVLPVGD---------EV 167 (546)
T ss_dssp HHHTCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCE--E-CSSEEECHHHHHHHBTTBBSEEEEEETT---------EE
T ss_pred HhcCCc-EEeccCcccccC--HHHHHHHHHhhcCCCE--E-EEEeecCCCCCccccccCCCeEEEEECC---------EE
Confidence 335655 578999998533 23333 3332222111 0 00000000 011222 23322 23
Q ss_pred EEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccCC
Q 015684 191 LNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQE 270 (402)
Q Consensus 191 ~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~~ 270 (402)
+.++.+.+...... ..+..++.-.+..+.+++.++++++. ....+|+++|.+....
T Consensus 168 IgiiG~~~~~~~~~-~~~~~~~~~~d~~~~~~~~v~~l~~~---------g~D~iI~l~H~g~~~d-------------- 223 (546)
T 4h2g_A 168 VGIVGYTSKETPFL-SNPGTNLVFEDEITALQPEVDKLKTL---------NVNKIIALGHSGFEMD-------------- 223 (546)
T ss_dssp EEEEEEECTTHHHH-SCCCSSEEECCHHHHHHHHHHHHHHT---------TCCCEEEEEESCHHHH--------------
T ss_pred EEEEEecccccccc-cCCCCCcEEccHHHHHHHHHHHHHhc---------CCCEEEEEeccCccch--------------
Confidence 56677766311000 00111222223456677777777652 4568999999987431
Q ss_pred cCCCCCCChHHHHHHHH-cCCeeEEEeccCCCC
Q 015684 271 GISSASVNSGFFTTMVA-AGDVKAVFTGHDHVN 302 (402)
Q Consensus 271 ~~~~~~~~~~~l~~l~~-~~~v~~v~~GH~H~~ 302 (402)
..+.+ -.+|+++++||.|..
T Consensus 224 ------------~~la~~~~giDlIlgGHtH~~ 244 (546)
T 4h2g_A 224 ------------KLIAQKVRGVDVVVGGHSNTF 244 (546)
T ss_dssp ------------HHHHHHSTTCCEEECCSSCCC
T ss_pred ------------HHHHHhCCCCcEEEeCCcCcc
Confidence 12222 257999999999983
No 35
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.80 E-value=2e-07 Score=92.42 Aligned_cols=104 Identities=12% Similarity=0.130 Sum_probs=53.4
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEE-cCCccCCCChhhHHHHHHHHHhHh
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVF-TGDNIFGFDATDAAKSLNAAFAPA 120 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~-~GDli~~~~~~~~~~~~~~~l~~~ 120 (402)
.+++|+++||+|-.-.... + ........+......+..+.+.++++.|+.+++ +||++.+. .......-...++.+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~-~-~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~l 81 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYK-V-PWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIM 81 (509)
T ss_dssp EEEEEEEECCCTTCCSCBC-C-TTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHH
T ss_pred eEEEEEEEccccCCccCcc-c-ccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHH
Confidence 4699999999995432211 0 000000011123334455555566778998877 99965532 111111111223323
Q ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHh
Q 015684 121 IASNIPWVAVLGNHDQESTLSREGVMKHIVT 151 (402)
Q Consensus 121 ~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~ 151 (402)
...+.. ++++||||+..+ .+.+.+.+..
T Consensus 82 n~lg~D-~~tlGNHEfd~G--~~~l~~~l~~ 109 (509)
T 3ive_A 82 NTMPFD-AVTIGNHEFDHG--WDNTLLQLSQ 109 (509)
T ss_dssp TTSCCS-EECCCGGGGTTC--HHHHHHHHTT
T ss_pred HhcCCc-EEeecccccccC--HHHHHHHHhh
Confidence 234544 567899998554 4455565544
No 36
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.69 E-value=1.2e-07 Score=95.35 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=99.1
Q ss_pred CceEEEEEeccCCcCCCCC-----CCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhh--HHHHH
Q 015684 42 GEFKILQVADMHFANGKTT-----PCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATD--AAKSL 113 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~--~~~~~ 113 (402)
-+++|+|++|+|-.-.... .+.+ ...+......+..+.+.++++.|+ ++|.+||++.+..... ..+..
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~----~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~ 86 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQ----TKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSAD 86 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEE----EEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcc----cccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHH
Confidence 4699999999994432210 0000 000112233334444445556676 8899999655431100 01122
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcCCcccc--cCCCCCccccc-cccce-EEeccCCCCCCCCce
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLKNTLSQ--VNPSDAHIIDG-FGNYN-LEIGGVKGSGFENKS 189 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~g-~~~y~-~~~~~~~~~~~~~~~ 189 (402)
.+.+. ..+.. ++++||||+... .+.+.+++....+.+-. +.........+ +..|. +++.+ .
T Consensus 87 ~~~ln---~lg~D-~~tlGNHEfd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G---------~ 151 (579)
T 3ztv_A 87 AAVMN---AGNFH-YFTLGNHEFDAG--NEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDG---------E 151 (579)
T ss_dssp HHHHH---HHTCS-EEECCSGGGTTH--HHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETT---------E
T ss_pred HHHHH---hcCcC-eeeccccccccC--HHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECC---------E
Confidence 23333 34554 478999998533 45555665543322110 00000000101 11232 23333 2
Q ss_pred eEEEEEEeCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCccccCCCCCeEEEEecChhhhhcccCCCcccccC
Q 015684 190 VLNLYFLDSGDYSTVPSVPGYGWIKPSQQFWFEQTSARLQRAYMSKPAAQKAPAPGLVYFHIPLPEFAYFDQSNFTGVRQ 269 (402)
Q Consensus 190 ~~~l~~lDs~~~~~~~~~~~~g~i~~~q~~Wl~~~l~~l~~~~~~~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~G~~~ 269 (402)
.+.++.+.+.........+..++.-.+..+-+++.++++++. ....+|+++|.+....
T Consensus 152 kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~---------g~d~iI~l~H~G~~~d------------- 209 (579)
T 3ztv_A 152 KIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQ---------GINKIILLSHAGSEKN------------- 209 (579)
T ss_dssp EEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTT---------TCCCEEEEEETCHHHH-------------
T ss_pred EEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhC---------CCCEEEEEeccCchhh-------------
Confidence 366777744100000000112222223455577777777642 3557899999887431
Q ss_pred CcCCCCCCChHHHHHHHH-cCCeeEEEeccCCCC
Q 015684 270 EGISSASVNSGFFTTMVA-AGDVKAVFTGHDHVN 302 (402)
Q Consensus 270 ~~~~~~~~~~~~l~~l~~-~~~v~~v~~GH~H~~ 302 (402)
..+.+ -.+|+++++||.|..
T Consensus 210 -------------~~la~~~~giDlIlgGHtH~~ 230 (579)
T 3ztv_A 210 -------------IEIAQKVNDIDVIVTGDSHYL 230 (579)
T ss_dssp -------------HHHHHHCSSCCEEEECSSCCE
T ss_pred -------------HHHHHhCCCCCEEEeCCCCcc
Confidence 12222 246999999999983
No 37
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.51 E-value=1.8e-05 Score=74.13 Aligned_cols=103 Identities=19% Similarity=0.148 Sum_probs=52.1
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHH-------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLN------- 114 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~------- 114 (402)
+++|++++|+|-.-.... +.. ...........+..+.+.++++.|+ ++|-+||++.+. ....+....
T Consensus 11 ~l~Il~tnD~Hg~~~~~~-~~~---~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs-~~~~~~~~~~~~~g~~ 85 (341)
T 3gve_A 11 HLSILATTDIHANMMDYD-YYS---DKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN-PLGEYAVKYQKDDIIS 85 (341)
T ss_dssp EEEEEEECCCTTCCSSEE-TTT---TEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS-HHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccCCCccCcc-ccC---CCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc-HHHHHhhhcccccccc
Confidence 589999999996533311 100 0000112233334444445556665 667899965432 111111111
Q ss_pred -----HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 115 -----AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 115 -----~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
..+..+...+.- ++++||||+..+ .+.+.+.+....
T Consensus 86 ~g~~~~~~~~ln~lg~D-a~tlGNHEfd~G--~~~L~~~~~~~~ 126 (341)
T 3gve_A 86 GTKTHPIISVMNALKYD-AGTLGNHEFNYG--LDFLDGTIKGAD 126 (341)
T ss_dssp TSSCCHHHHHHHHTTCC-BEECCGGGGTTC--HHHHHHHHHTCS
T ss_pred cccccHHHHHHHhhCCC-eeeccchhhccC--HHHHHHHHHhcC
Confidence 122333335554 467899999654 455666665543
No 38
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.45 E-value=1.3e-05 Score=74.96 Aligned_cols=103 Identities=21% Similarity=0.196 Sum_probs=52.6
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHH-------
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLN------- 114 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~------- 114 (402)
+++|++++|+|-.-.+.....+ .+ ........+..+.+.++++.++ ++|.+||++.+. ....+....
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~-~~---~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs-~~~~~~~~~~~~~g~~ 82 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKD-AA---TEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGS-PLGDYMAAKGLKEGDV 82 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTT-EE---CSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSS-HHHHHHHHHCCCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCC-Cc---cccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCc-hhHHhhhhcccccccc
Confidence 6899999999965332110000 00 0112233334444545566666 778999965432 111121110
Q ss_pred -HHHhHhHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 115 -AAFAPAIASNIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 115 -~~l~~~~~~~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
..+..+...+.- ++++||||+..+ .+.+.+.+....
T Consensus 83 ~p~~~~mn~lg~D-~~t~GNHEfd~G--~~~l~~~~~~a~ 119 (339)
T 3jyf_A 83 HPVYKAMNTLNYA-VGNLGNHEFNYG--LDFLHKALAGAK 119 (339)
T ss_dssp CHHHHHHTTSCCS-EEECCGGGGTTC--HHHHHHHHHTCS
T ss_pred hHHHHHHHhcCCC-EEecchhhhhcc--HHHHHHHHHhcC
Confidence 123333335555 456899998654 455666665443
No 39
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=98.29 E-value=9.8e-05 Score=73.54 Aligned_cols=96 Identities=18% Similarity=0.093 Sum_probs=45.3
Q ss_pred ceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 43 EFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 43 ~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
+++|+|++|+|-.-......................+..+.+.++++.|+ ++|-+||++.+.. ...+..-...+..+.
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~-~~~~~~g~~~i~~mN 81 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTI-WFTVYKGAEVAHFMN 81 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSH-HHHHHTTHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchH-HHHHhCChHHHHHHh
Confidence 47899999999543221110000000001112233333344444556776 6677999655432 111111111222222
Q ss_pred hCCCCEEEEcCCCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQESTL 140 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~~ 140 (402)
..+. =+.++||||+..+.
T Consensus 82 ~lgy-Da~~lGNHEFd~G~ 99 (530)
T 4h1s_A 82 ALRY-DAMALGNHEFDNGV 99 (530)
T ss_dssp HTTC-CEEECCGGGGTTTT
T ss_pred ccCC-CEEEEchhhhccCH
Confidence 2444 35688999997654
No 40
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.29 E-value=1.8e-05 Score=78.87 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=45.4
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCC-ChhHHHHHHHHHHhcCCC-EEEEcCCccCCCChhh----HHHHHH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCS-DLNTTAFINRMISAEKPD-LIVFTGDNIFGFDATD----AAKSLN 114 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~pD-~vv~~GDli~~~~~~~----~~~~~~ 114 (402)
..+++|++++|+|-.-.......+.. .+.. -.+....+.+..++++|| ++|.+||++.+..... ..+...
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~----~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~ 88 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYH----ANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKST 88 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGC----CCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTH
T ss_pred ceEEEEEEEcccccCccCcccccccc----cccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHH
Confidence 46799999999997643221000000 0000 111222333322246788 5799999664421111 001122
Q ss_pred HHHhHhHhCCCCEEEEcCCCCCCCC
Q 015684 115 AAFAPAIASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 115 ~~l~~~~~~~iP~~~v~GNHD~~~~ 139 (402)
++++ ..+.. ++++||||+...
T Consensus 89 ~~ln---~lg~D-a~tlGNHEfD~G 109 (557)
T 3c9f_A 89 PIFI---KQDYD-LLTIGNHELYLW 109 (557)
T ss_dssp HHHT---TSCCS-EECCCGGGSSSH
T ss_pred HHHH---hcCCC-EEeecchhcccc
Confidence 3333 35655 567899999654
No 41
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.09 E-value=2.9e-06 Score=74.55 Aligned_cols=68 Identities=25% Similarity=0.222 Sum_probs=42.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCChhhHHHHHHHHHhH
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAP 119 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~ 119 (402)
+..+||+++||+|-. ...+..+.+.+.. .++|.||++||++ +.+. ... +.+..
T Consensus 10 ~~~~~i~visDiHg~--------------------~~~l~~~l~~~~~~~~~d~~i~~GD~~-~~g~-~~~----~~~~~ 63 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGC--------------------YTNLMNKLDTIGFDNKKDLLISVGDLV-DRGA-ENV----ECLEL 63 (221)
T ss_dssp GGCSCEEEECCCTTC--------------------HHHHHHHHHHHTCCTTTCEEEECSCCS-SSSS-CHH----HHHGG
T ss_pred CCCceEEEEEcCCCC--------------------HHHHHHHHHHccCCCCCCEEEEeCCcc-CCCC-ChH----HHHHH
Confidence 456899999999921 1222333443333 3789999999954 4432 222 22332
Q ss_pred hHhCCCCEEEEcCCCCC
Q 015684 120 AIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 120 ~~~~~iP~~~v~GNHD~ 136 (402)
+. ..++++|+||||.
T Consensus 64 l~--~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 64 IT--FPWFRAVRGNHEQ 78 (221)
T ss_dssp GG--STTEEECCCHHHH
T ss_pred Hh--cCCEEEEccCcHH
Confidence 22 3589999999996
No 42
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.90 E-value=1e-05 Score=72.95 Aligned_cols=65 Identities=25% Similarity=0.297 Sum_probs=40.5
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
.||+++||+| +. ...+..+.+.+...++ |.+|++||++. .+. ...+.+ +.+..
T Consensus 19 ~~i~visDiH-g~-------------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd-~g~-~~~~~l-~~l~~--- 72 (262)
T 2qjc_A 19 GRVIIVGDIH-GC-------------------RAQLEDLLRAVSFKQGSDTLVAVGDLVN-KGP-DSFGVV-RLLKR--- 72 (262)
T ss_dssp SCEEEECCCT-TC-------------------HHHHHHHHHHHTCCTTTSEEEECSCCSS-SSS-CHHHHH-HHHHH---
T ss_pred CeEEEEeCCC-CC-------------------HHHHHHHHHHHhccCCCCEEEEecCCCC-CCC-CHHHHH-HHHHH---
Confidence 4999999999 21 1223444444444455 99999999554 432 223333 22221
Q ss_pred CCCCEEEEcCCCCC
Q 015684 123 SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 ~~iP~~~v~GNHD~ 136 (402)
.++++|+||||.
T Consensus 73 --~~~~~v~GNHd~ 84 (262)
T 2qjc_A 73 --LGAYSVLGNHDA 84 (262)
T ss_dssp --HTCEECCCHHHH
T ss_pred --CCCEEEeCcChH
Confidence 379999999996
No 43
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.88 E-value=9.3e-06 Score=73.86 Aligned_cols=67 Identities=19% Similarity=0.185 Sum_probs=40.8
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh-cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHh
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA-EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~ 122 (402)
|+|+++||+|-. ...+..+.+.+.. .++|.+|++||++. .+ +...+.+ +.+..
T Consensus 1 M~i~vigDiHG~--------------------~~~l~~ll~~~~~~~~~d~~v~lGD~vd-rG-~~s~~~l-~~l~~--- 54 (280)
T 2dfj_A 1 MATYLIGDVHGC--------------------YDELIALLHKVEFTPGKDTLWLTGDLVA-RG-PGSLDVL-RYVKS--- 54 (280)
T ss_dssp -CEEEECCCCSC--------------------HHHHHHHHHHTTCCTTTCEEEECSCCSS-SS-SCHHHHH-HHHHH---
T ss_pred CeEEEEecCCCC--------------------HHHHHHHHHHhCCCCCCCEEEEeCCcCC-CC-CccHHHH-HHHHh---
Confidence 689999999932 1222333444433 46899999999554 43 2233333 22322
Q ss_pred CCCCEEEEcCCCCC
Q 015684 123 SNIPWVAVLGNHDQ 136 (402)
Q Consensus 123 ~~iP~~~v~GNHD~ 136 (402)
...+++++.||||.
T Consensus 55 l~~~~~~v~GNHe~ 68 (280)
T 2dfj_A 55 LGDSVRLVLGNHDL 68 (280)
T ss_dssp TGGGEEECCCHHHH
T ss_pred CCCceEEEECCCcH
Confidence 23479999999996
No 44
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.83 E-value=0.00023 Score=64.19 Aligned_cols=75 Identities=13% Similarity=0.195 Sum_probs=42.9
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI 121 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~ 121 (402)
.+|||++++|+|-..+. ......+.+.-++.++|++++.||...+.... . ....+.+.
T Consensus 3 ~~m~ilf~GDv~G~~G~-----------------~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~-~-~~~~~~ln--- 60 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGR-----------------NIIKNNLAQLKSKYQADLVIVNAENTTHGKGL-S-LKHYEFLK--- 60 (281)
T ss_dssp CCCEEEEECEEBHHHHH-----------------HHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC-C-HHHHHHHH---
T ss_pred ceEEEEEECCcCChHHH-----------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc-C-HHHHHHHH---
Confidence 36899999999933210 11112233332334789999999966654211 1 12223333
Q ss_pred hCCCCEEEEcCCCCCCCC
Q 015684 122 ASNIPWVAVLGNHDQEST 139 (402)
Q Consensus 122 ~~~iP~~~v~GNHD~~~~ 139 (402)
..++-++ +.|||++...
T Consensus 61 ~~G~Da~-TlGNHefD~g 77 (281)
T 1t71_A 61 EAGVNYI-TMGNHTWFQK 77 (281)
T ss_dssp HHTCCEE-ECCTTTTCCG
T ss_pred hcCCCEE-EEccCcccCC
Confidence 3566544 6699999766
No 45
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.62 E-value=0.0062 Score=53.83 Aligned_cols=81 Identities=20% Similarity=0.284 Sum_probs=46.1
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++.|+=-..+ ...+..+...+.++. |++++.|...++..... + .....+.+.
T Consensus 1 m~ilfiGDi~g~~G------------------~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~---~~~~~l~~~ 56 (252)
T 2z06_A 1 MRVLFIGDVMAEPG------------------LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--R---RSYRLLREA 56 (252)
T ss_dssp CEEEEECCBCHHHH------------------HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--H---HHHHHHHHH
T ss_pred CEEEEEEecCCccc------------------HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--H---HHHHHHHhC
Confidence 68999999843221 122233344444556 99999888565432111 1 222223346
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
++-++ +.|||++... ++.+++...+
T Consensus 57 G~D~~-T~GNHefD~~----~l~~~l~~~~ 81 (252)
T 2z06_A 57 GVDLV-SLGNHAWDHK----EVYALLESEP 81 (252)
T ss_dssp TCCEE-ECCTTTTSCT----THHHHHHHSS
T ss_pred CCCEE-EeccEeeECc----hHHHHhccCC
Confidence 77775 7799999764 4556665544
No 46
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=97.50 E-value=0.00048 Score=63.14 Aligned_cols=84 Identities=15% Similarity=0.109 Sum_probs=47.2
Q ss_pred CCCcceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-CCCEEEEcCCccCCCChhhH
Q 015684 31 KQERKLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLIVFTGDNIFGFDATDA 109 (402)
Q Consensus 31 ~~~~~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~pD~vv~~GDli~~~~~~~~ 109 (402)
+++.-+++.....+|+++++|+|-. ...+..+.+.+... ..+.+|++||++. .| +..
T Consensus 47 ~ep~l~~l~~p~~~ri~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG-~~s 104 (315)
T 3h63_A 47 KLSTLVETTLKETEKITVCGDTHGQ--------------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RG-SFS 104 (315)
T ss_dssp TSCSEEEECCCTTCEEEEECCCTTC--------------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SS-TTH
T ss_pred hCCCeEEEecCCCceEEEEecCCCC--------------------HHHHHHHHHHhCCCCCCCEEEEeCCccC-CC-cCh
Confidence 3444556665677999999999932 11222222222222 2346999999554 43 233
Q ss_pred HHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 110 AKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 110 ~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.+.+..++.--...+-.++.+.||||.
T Consensus 105 ~evl~lL~~lk~~~p~~v~~lrGNHE~ 131 (315)
T 3h63_A 105 VEVILTLFGFKLLYPDHFHLLRGNHET 131 (315)
T ss_dssp HHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred HHHHHHHHHhhhhcCCcEEEEecCccc
Confidence 334332222111234469999999996
No 47
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=97.48 E-value=0.00024 Score=65.21 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=42.5
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH-h
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI-A 122 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~-~ 122 (402)
.++++++|+|-. ...+..+.+.+....++.+|++||++. .| +...+.+.. +..+. .
T Consensus 50 ~~i~viGDIHG~--------------------~~~L~~ll~~~~~~~~~~~vflGD~VD-RG-~~s~evl~l-L~~lk~~ 106 (309)
T 2ie4_C 50 CPVTVCGDVHGQ--------------------FHDLMELFRIGGKSPDTNYLFMGDYVD-RG-YYSVETVTL-LVALKVR 106 (309)
T ss_dssp SSEEEECCCTTC--------------------HHHHHHHHHHHCCTTTSCEEECSCCSS-SS-TTHHHHHHH-HHHHHHH
T ss_pred CCEEEEecCCCC--------------------HHHHHHHHHHcCCCCCCEEEEeCCccC-CC-CChHHHHHH-HHHHHhh
Confidence 679999999931 122233334443456788999999654 43 223333322 22221 2
Q ss_pred CCCCEEEEcCCCCCC
Q 015684 123 SNIPWVAVLGNHDQE 137 (402)
Q Consensus 123 ~~iP~~~v~GNHD~~ 137 (402)
.+-.++.+.||||..
T Consensus 107 ~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 107 YRERITILRGNHESR 121 (309)
T ss_dssp CTTTEEECCCTTSST
T ss_pred CCCcEEEEeCCCCHH
Confidence 344699999999985
No 48
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.44 E-value=0.00023 Score=66.64 Aligned_cols=45 Identities=11% Similarity=0.166 Sum_probs=28.8
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCcccccCCCeeEEecCCccCC
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVNDFCGRLTGIQLCYGGGFGYH 322 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~~g~~ 322 (402)
+...++.+++..+++.+++||+|........+|..+....+..|+
T Consensus 266 g~~~~~~fl~~~~~~~IV~GHt~~~~~~~~~~~~~i~Idsg~~~g 310 (342)
T 2z72_A 266 TEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKVG 310 (342)
T ss_dssp CHHHHHHHHHHHTCSEEEECSSCCSSCEEETTTTEEECCCCGGGS
T ss_pred ChHHHHHHHHHCCCcEEEECCCcccchhhhcCCCEEEEECCCCCC
Confidence 345567777777799999999998543333455444444444454
No 49
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.42 E-value=0.0068 Score=53.77 Aligned_cols=81 Identities=12% Similarity=0.131 Sum_probs=45.3
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
|||+++.|+= |.. ....++.+...+.++. |++++.|+...+.... .. ...+.+ ...
T Consensus 1 m~ilf~GDv~-g~~-----------------G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~-~~-~~~~~l---~~~ 56 (255)
T 1t70_A 1 MRVLFIGDVF-GQP-----------------GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGM-HR-DAARGA---LEA 56 (255)
T ss_dssp CEEEEECCBB-HHH-----------------HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSC-CH-HHHHHH---HHH
T ss_pred CEEEEEeccC-ChH-----------------HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCC-CH-HHHHHH---HhC
Confidence 6899999985 211 1122233334444455 9999999966554211 11 122333 345
Q ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHhcC
Q 015684 124 NIPWVAVLGNHDQESTLSREGVMKHIVTLK 153 (402)
Q Consensus 124 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 153 (402)
++-++ +.|||++... ++.+++...+
T Consensus 57 G~Da~-TlGNHefD~~----~l~~~l~~~~ 81 (255)
T 1t70_A 57 GAGCL-TLGNHAWHHK----DIYPMLSEDT 81 (255)
T ss_dssp TCSEE-ECCTTTTSST----THHHHHHTTC
T ss_pred CCCEE-EeccccccCc----hHHHHHhhCC
Confidence 77655 5599999753 4556665544
No 50
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=97.38 E-value=0.00036 Score=64.54 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=42.4
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.++.+++|+|-. ...+..+.+.+.....|-+|++||+|. .| +...+.+.-++.--...
T Consensus 57 ~~i~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~vflGD~VD-RG-~~s~evl~lL~~lk~~~ 114 (330)
T 1fjm_A 57 APLKICGDIHGQ--------------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RG-KQSLETICLLLAYKIKY 114 (330)
T ss_dssp SSEEEECBCTTC--------------------HHHHHHHHHHHCSTTSSCEEECSCCSS-SS-SCHHHHHHHHHHHHHHS
T ss_pred CceEEecCCCCC--------------------HHHHHHHHHHhCCCCcceEEeCCCcCC-CC-CChHHHHHHHHHhhhhc
Confidence 579999999932 222233334333345688999999655 43 23333443222211123
Q ss_pred CCCEEEEcCCCCCC
Q 015684 124 NIPWVAVLGNHDQE 137 (402)
Q Consensus 124 ~iP~~~v~GNHD~~ 137 (402)
+-.++.+.||||..
T Consensus 115 p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 115 PENFFLLRGNHECA 128 (330)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCceEEecCCchHh
Confidence 45699999999973
No 51
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.00084 Score=62.02 Aligned_cols=80 Identities=18% Similarity=0.180 Sum_probs=45.2
Q ss_pred ceeecCC--CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCC-CEEEEcCCccCCCChhhHHH
Q 015684 35 KLRFRQN--GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKP-DLIVFTGDNIFGFDATDAAK 111 (402)
Q Consensus 35 ~l~~~~~--~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~p-D~vv~~GDli~~~~~~~~~~ 111 (402)
.+++... ..+|+++++|+|-. ...+..+.+.+..... +.+|++||++. .| +...+
T Consensus 53 ~~~l~~p~~~~~ri~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG-~~s~e 110 (335)
T 3icf_A 53 MVELENNSTPDVKISVCGDTHGQ--------------------FYDVLNLFRKFGKVGPKHTYLFNGDFVD-RG-SWSCE 110 (335)
T ss_dssp EEEECCSSSTTCEEEEECCCTTC--------------------HHHHHHHHHHHCCCBTTEEEEECSCCSS-SS-TTHHH
T ss_pred eEEecCCcccCceEEEEecCCCC--------------------HHHHHHHHHHcCCCCCCcEEEEeCCccC-CC-cChHH
Confidence 3444433 67999999999942 2222233333322223 46999999554 43 23333
Q ss_pred HHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 112 SLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 112 ~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
.+..++.--...+-.++.+.||||.
T Consensus 111 vl~lL~~lk~~~p~~v~llrGNHE~ 135 (335)
T 3icf_A 111 VALLFYCLKILHPNNFFLNRGNHES 135 (335)
T ss_dssp HHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred HHHHHHHHhhhCCCcEEEecCchhh
Confidence 4332222111234569999999996
No 52
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.37 E-value=0.00069 Score=66.46 Aligned_cols=80 Identities=15% Similarity=0.123 Sum_probs=45.7
Q ss_pred ceeecCCCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcC-CCEEEEcCCccCCCChhhHHHHH
Q 015684 35 KLRFRQNGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEK-PDLIVFTGDNIFGFDATDAAKSL 113 (402)
Q Consensus 35 ~l~~~~~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-pD~vv~~GDli~~~~~~~~~~~~ 113 (402)
.+..+....+++++++|+|-. ...+..+.+.+.... .|.+|++||++ +.| +...+.+
T Consensus 204 ~~~~~~~~~~~~~vigDiHG~--------------------~~~l~~~l~~~~~~~~~~~~v~lGD~v-drG-~~s~e~~ 261 (477)
T 1wao_1 204 LVETTLKETEKITVCGDTHGQ--------------------FYDLLNIFELNGLPSETNPYIFNGDFV-DRG-SFSVEVI 261 (477)
T ss_dssp EEEECCCSSCEEEEECBCTTC--------------------HHHHHHHHHHHCCCBTTBCEEEESCCS-SSS-TTHHHHH
T ss_pred eEEeecCCCcceEEEeCCCCC--------------------HHHHHHHHHHcCCCCCcCeEEEecccc-CCC-cchHHHH
Confidence 344444457899999999932 112222333222222 35799999955 444 2333344
Q ss_pred HHHHhHhHhCCCCEEEEcCCCCC
Q 015684 114 NAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 114 ~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
..++.--...+-+++.+.||||.
T Consensus 262 ~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 262 LTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp HHHHHHHHHSTTTEEEECCTTSS
T ss_pred HHHHHHHhhCCCceEeecCCccH
Confidence 33332112245689999999996
No 53
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=97.28 E-value=0.0007 Score=65.22 Aligned_cols=83 Identities=16% Similarity=0.268 Sum_probs=53.7
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHH-----------hcCCCEEEEcCCccCCCCh---
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMIS-----------AEKPDLIVFTGDNIFGFDA--- 106 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-----------~~~pD~vv~~GDli~~~~~--- 106 (402)
+...+|+.+||+|++..... ....++.+.+.+. ..++..||++||.+.+.+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~--------------~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e 263 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGE--------------SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRD 263 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHH--------------HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC------
T ss_pred CCCCEEEEECCcccCCCccc--------------chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccch
Confidence 45679999999999975310 0123344444443 2478999999997776432
Q ss_pred ----------------hhHHHHHHHHHhHhHhCCCCEEEEcCCCCCCC
Q 015684 107 ----------------TDAAKSLNAAFAPAIASNIPWVAVLGNHDQES 138 (402)
Q Consensus 107 ----------------~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~~~ 138 (402)
.+.++.+.+++..+. ..+|+.++|||||-..
T Consensus 264 ~~~~~~y~~~~~~~~~~~~~~~ld~~L~~l~-~~i~V~lmPG~~DP~~ 310 (476)
T 3e0j_A 264 SINKAKYLTKKTQAASVEAVKMLDEILLQLS-ASVPVDVMPGEFDPTN 310 (476)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHH-TTSCEEEECCTTSSSC
T ss_pred hhhhhhccccccchhhHHHHHHHHHHHHhcc-cCceEEecCCCCCccc
Confidence 123345555555543 6899999999999753
No 54
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=97.25 E-value=0.00065 Score=61.78 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=41.9
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.+|++++|+|-. ...+..+.+.+.....+.+|+.||++. .|. ...+.+.-.+.--...
T Consensus 56 ~~i~viGDIHG~--------------------~~~L~~ll~~~g~~~~~~~vfLGD~VD-rG~-~s~evl~lL~~lk~~~ 113 (299)
T 3e7a_A 56 APLKICGDIHGQ--------------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RGK-QSLETICLLLAYKIKY 113 (299)
T ss_dssp SSEEEECBCTTC--------------------HHHHHHHHHHHCSTTSSCEEECSCCSS-SSS-CHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCC--------------------HHHHHHHHHHhCCCCCccEEeCCcccC-CCC-CcHHHHHHHHHHHhhC
Confidence 368999999942 222333334333456688999999554 442 2333333222211123
Q ss_pred CCCEEEEcCCCCC
Q 015684 124 NIPWVAVLGNHDQ 136 (402)
Q Consensus 124 ~iP~~~v~GNHD~ 136 (402)
+-.++.+.||||.
T Consensus 114 p~~v~~lrGNHE~ 126 (299)
T 3e7a_A 114 PENFFLLRGNHEC 126 (299)
T ss_dssp TTTEEECCCTTSS
T ss_pred CCcEEEEecCchh
Confidence 4569999999997
No 55
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=97.11 E-value=0.0011 Score=61.55 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=42.2
Q ss_pred eEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhC
Q 015684 44 FKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIAS 123 (402)
Q Consensus 44 ~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~ 123 (402)
.++++++|+|-. ...+..+.+.......|.+|++||++. .| +...+.+...+.--...
T Consensus 70 ~pi~ViGDIHG~--------------------~~dL~~ll~~~g~~~~~~~vfLGD~VD-RG-~~s~Evl~lL~~lk~~~ 127 (357)
T 3ll8_A 70 APVTVCGDIHGQ--------------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RG-YFSIECVLYLWALKILY 127 (357)
T ss_dssp SSEEEECCCTTC--------------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SS-TTHHHHHHHHHHHHHHC
T ss_pred ccceeeccCCCC--------------------HHHHHHHHHhcCCCCCcEEEECCCccC-CC-cChHHHHHHHHHhhhhc
Confidence 469999999942 222233334333456789999999554 44 22333333222211123
Q ss_pred CCCEEEEcCCCCCC
Q 015684 124 NIPWVAVLGNHDQE 137 (402)
Q Consensus 124 ~iP~~~v~GNHD~~ 137 (402)
+-.++.+.||||..
T Consensus 128 p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 128 PKTLFLLRGNHECR 141 (357)
T ss_dssp TTTEEECCCTTSSH
T ss_pred CCcEEEEeCchhhh
Confidence 44699999999973
No 56
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=96.91 E-value=0.0019 Score=62.69 Aligned_cols=26 Identities=4% Similarity=0.183 Sum_probs=22.2
Q ss_pred ChHHHHHHHHcCCeeEEEeccCCCCc
Q 015684 278 NSGFFTTMVAAGDVKAVFTGHDHVND 303 (402)
Q Consensus 278 ~~~~l~~l~~~~~v~~v~~GH~H~~~ 303 (402)
+......++++.++++++-||.-..+
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~ 286 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDA 286 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred CHHHHHHHHHHcCCcEEEEccchhcc
Confidence 55778999999999999999998743
No 57
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.041 Score=52.78 Aligned_cols=82 Identities=20% Similarity=0.234 Sum_probs=54.0
Q ss_pred CCceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHhc-CCCEEEEcCCccCCCCh-------------
Q 015684 41 NGEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISAE-KPDLIVFTGDNIFGFDA------------- 106 (402)
Q Consensus 41 ~~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~pD~vv~~GDli~~~~~------------- 106 (402)
+.+++|++.|..+.....- +...+..+.+.++++ +||.+|+.|.+++....
T Consensus 145 ~~~l~ivvAsGPyT~sdnl---------------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~ 209 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNF---------------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQF 209 (460)
T ss_dssp SSCEEEEEEESCCSCSSCC---------------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTC
T ss_pred CCCcEEEEEeCCccCCCcc---------------ChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccc
Confidence 4689999999999776431 334445566666554 89999999997765521
Q ss_pred ---hh-HHHHHHHHHhHhHh---CCCCEEEEcCCCCCC
Q 015684 107 ---TD-AAKSLNAAFAPAIA---SNIPWVAVLGNHDQE 137 (402)
Q Consensus 107 ---~~-~~~~~~~~l~~~~~---~~iP~~~v~GNHD~~ 137 (402)
.. ..+.+.+.+.++.+ ..+.+++|||+||..
T Consensus 210 ~~~~~t~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 210 KTQPKTLDELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp SSCCSSHHHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred cccccCHHHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 11 12334444443332 456799999999985
No 58
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=65.51 E-value=11 Score=34.54 Aligned_cols=72 Identities=18% Similarity=0.123 Sum_probs=42.2
Q ss_pred CceEEEEEeccCCcCCCCCCCCCCCcccccCCCChhHHHHHHHHHHh--------cCCCEEEEcCCccCCCChhhHHHHH
Q 015684 42 GEFKILQVADMHFANGKTTPCLDVLPSQVAGCSDLNTTAFINRMISA--------EKPDLIVFTGDNIFGFDATDAAKSL 113 (402)
Q Consensus 42 ~~~~i~~iSDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--------~~pD~vv~~GDli~~~~~~~~~~~~ 113 (402)
..++|+++||+|-. ...+..+.+.+.. .++|.+|++||++. .+. ...+.+
T Consensus 69 ~~~~i~vigDiHG~--------------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vd-rG~-~s~evl 126 (342)
T 2z72_A 69 GIKKVVALSDVHGQ--------------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFD-RGH-QVNEVL 126 (342)
T ss_dssp CCCEEEEECCCTTC--------------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSS-SSS-CHHHHH
T ss_pred CCCCEEEEECCCCC--------------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcC-CCC-CHHHHH
Confidence 45899999999932 1122223332221 15799999999554 432 222222
Q ss_pred HHHHhHhH----hCCCCEEEEcCCCCC
Q 015684 114 NAAFAPAI----ASNIPWVAVLGNHDQ 136 (402)
Q Consensus 114 ~~~l~~~~----~~~iP~~~v~GNHD~ 136 (402)
..+..+. ..+.+++++.||||.
T Consensus 127 -~~l~~l~~~~~~~~~~v~~v~GNHE~ 152 (342)
T 2z72_A 127 -WFMYQLDQQARDAGGMVHLLMGNHEQ 152 (342)
T ss_dssp -HHHHHHHHHHHHTTCEEEECCCHHHH
T ss_pred -HHHHHHHHHHhhCCCeEEEEecCCcH
Confidence 2222221 245679999999996
No 59
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=64.40 E-value=3.3 Score=35.23 Aligned_cols=29 Identities=10% Similarity=0.032 Sum_probs=19.9
Q ss_pred CCeeEEEeccCCCCcccccCCCeeEEecCC
Q 015684 289 GDVKAVFTGHDHVNDFCGRLTGIQLCYGGG 318 (402)
Q Consensus 289 ~~v~~v~~GH~H~~~~~~~~~gi~~~~~~~ 318 (402)
.+++++++||+|.. .....+++.++.+|+
T Consensus 177 ~~~~~vv~GHth~~-~~~~~~~~~~in~Gs 205 (221)
T 1g5b_A 177 KGADTFIFGHTPAV-KPLKFANQMYIDTGA 205 (221)
T ss_dssp BTSSEEEECSSCCS-SCEEETTEEECCCCH
T ss_pred cCCCEEEECCCCCc-cceeeCCEEEEECCC
Confidence 45789999999995 444556766554444
No 60
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=58.33 E-value=13 Score=34.77 Aligned_cols=46 Identities=24% Similarity=0.381 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCC
Q 015684 77 NTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGN 133 (402)
Q Consensus 77 ~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GN 133 (402)
..+..+.+++++.+||+|++.|| .+.. ...+ . ....+||++.+-|+
T Consensus 81 ~~~~~l~~~l~~~kPD~Vlv~gd-~~~~-----~aal----a-A~~~~IPv~h~eag 126 (385)
T 4hwg_A 81 LVIEKVDEVLEKEKPDAVLFYGD-TNSC-----LSAI----A-AKRRKIPIFHMEAG 126 (385)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESC-SGGG-----GGHH----H-HHHTTCCEEEESCC
T ss_pred HHHHHHHHHHHhcCCcEEEEECC-chHH-----HHHH----H-HHHhCCCEEEEeCC
Confidence 34566777888899999999999 3211 1111 1 11369999888654
No 61
>3iz5_H 60S ribosomal protein L7A (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_H
Probab=48.08 E-value=30 Score=29.90 Aligned_cols=50 Identities=18% Similarity=0.261 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
..+..+++..+..+||++.| ++ +.++-.+...|-. +.++|+.+|+|-=+.
T Consensus 133 neVTklVE~kKAqLVVIA~D-Vd----PiElV~fLPaLC~--k~gVPY~iVk~KarL 182 (258)
T 3iz5_H 133 NHVTYLIEQSKAQLVVIAHD-VD----PIELVVWLPALCR--KMEVPYCIVKGKARL 182 (258)
T ss_dssp HHHHHHHHTTCEEEEEEESC-CS----STHHHHHHHHHHT--TTTCCEEEESCHHHH
T ss_pred HHHHHHHHcCcceEEEEeCC-CC----hHHHHhHHHHHHH--hcCCCeEEECCHHHH
Confidence 34556677788999999999 65 3344444444432 479999999985443
No 62
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=46.68 E-value=62 Score=25.88 Aligned_cols=52 Identities=15% Similarity=0.279 Sum_probs=29.2
Q ss_pred HHHHHHHHHhcCCCEEEEcC---CccCCCChhhHHHHHHHHHhHhHhCCCCEEEE
Q 015684 79 TAFINRMISAEKPDLIVFTG---DNIFGFDATDAAKSLNAAFAPAIASNIPWVAV 130 (402)
Q Consensus 79 ~~~l~~~i~~~~pD~vv~~G---Dli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v 130 (402)
...+...+...+||+|++.. |+..+....+..+.+.++++.+.+.+.+++++
T Consensus 51 ~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~ 105 (190)
T 1ivn_A 51 LARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLM 105 (190)
T ss_dssp HHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 34455555567899887753 53222222334455666666665566666554
No 63
>4a17_F RPL7A, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_F 4a1c_F 4a1e_F
Probab=44.98 E-value=56 Score=28.30 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=34.1
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
..+...++..+.-+||+++| ++ +..+..+...+-. ..+||+++++|.-+.
T Consensus 130 neVtKaIekgKAqLVVIA~D-vd----Pielv~~LPaLCe--e~~VPY~~V~sK~~L 179 (255)
T 4a17_F 130 NHITTLIENKQAKLVVIAHD-VD----PIELVIFLPQLCR--KNDVPFAFVKGKAAL 179 (255)
T ss_dssp HHHHHHHHTSCCSEEEEESC-CS----STHHHHHHHHHHH--HTTCCEEEESCHHHH
T ss_pred HHHHHHHHcCCceEEEEeCC-CC----hHHHHHHHHHHHH--HcCCCEEEECCHHHH
Confidence 44566777889999999999 64 3333333333332 479999999986554
No 64
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=43.73 E-value=39 Score=31.52 Aligned_cols=46 Identities=28% Similarity=0.346 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcC
Q 015684 77 NTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLG 132 (402)
Q Consensus 77 ~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~G 132 (402)
..+..+.+.+++.+||+|++.|| .+ . .+...+. ....+||++.+-|
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd-~~-----~---~l~~~la-A~~~~IPv~h~~a 146 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGD-TT-----T---SFAAGLA-TFYQQKMLGHVEA 146 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETT-CH-----H---HHHHHHH-HHHTTCEEEEESC
T ss_pred HHHHHHHHHHHHcCCCEEEEECC-ch-----h---HHHHHHH-HHHhCCCEEEEEC
Confidence 34566777788899999999999 21 1 1111111 1236999887754
No 65
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=40.80 E-value=49 Score=30.71 Aligned_cols=46 Identities=26% Similarity=0.398 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcC
Q 015684 77 NTTAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLG 132 (402)
Q Consensus 77 ~~~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~G 132 (402)
..+..+.+.+++.+||+|++.|| .+ . .+...+. ....+||++.+-+
T Consensus 98 ~~~~~l~~~l~~~kPDvVi~~g~-~~-----~---~~~~~~a-a~~~~IPv~h~~a 143 (396)
T 3dzc_A 98 KILLGMQQVLSSEQPDVVLVHGD-TA-----T---TFAASLA-AYYQQIPVGHVEA 143 (396)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETT-SH-----H---HHHHHHH-HHTTTCCEEEETC
T ss_pred HHHHHHHHHHHhcCCCEEEEECC-ch-----h---HHHHHHH-HHHhCCCEEEEEC
Confidence 34566677788899999999999 21 1 1111111 1246999887743
No 66
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=40.02 E-value=89 Score=23.82 Aligned_cols=49 Identities=18% Similarity=0.142 Sum_probs=31.9
Q ss_pred HHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 81 FINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 81 ~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
...+.++..+.-+||++.| ..... .......+-. ..++|++.++++-+.
T Consensus 31 ~v~Kai~~gka~LViiA~D-~~p~~----~~~~i~~lc~--~~~Ip~~~v~sk~~L 79 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAED-CDQGN----YVKLVKALCA--KNEIKYVSVPKRASL 79 (126)
T ss_dssp HHHHHHHHTCCSEEEEESS-CCSTT----HHHHHHHHHH--HTTCCEEEESCSHHH
T ss_pred HHHHHHHcCCceEEEEeCC-CChHH----HHHHHHHHHH--HhCCCEEEECCHHHH
Confidence 3456667789999999999 54322 2122222222 369999999887765
No 67
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=37.33 E-value=46 Score=23.15 Aligned_cols=49 Identities=12% Similarity=0.007 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
+...+.++..+.-+||++.| +. ++....+ ..+. ...++|++.++++-+.
T Consensus 17 ~~v~kai~~gkaklViiA~D-~~----~~~~~~i-~~lc--~~~~Ip~~~v~sk~eL 65 (82)
T 3v7e_A 17 KQTVKALKRGSVKEVVVAKD-AD----PILTSSV-VSLA--EDQGISVSMVESMKKL 65 (82)
T ss_dssp HHHHHHHTTTCEEEEEEETT-SC----HHHHHHH-HHHH--HHHTCCEEEESCHHHH
T ss_pred HHHHHHHHcCCeeEEEEeCC-CC----HHHHHHH-HHHH--HHcCCCEEEECCHHHH
Confidence 34566677789999999999 53 2222222 2221 2469999999876543
No 68
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=37.17 E-value=65 Score=24.99 Aligned_cols=12 Identities=33% Similarity=0.385 Sum_probs=8.0
Q ss_pred CCceEEEEEecc
Q 015684 41 NGEFKILQVADM 52 (402)
Q Consensus 41 ~~~~~i~~iSDl 52 (402)
+.++.++++-+.
T Consensus 33 ~a~l~ll~v~~~ 44 (162)
T 1mjh_A 33 AEEVILLHVIDE 44 (162)
T ss_dssp CCEEEEEEEEEG
T ss_pred CCeEEEEEEecC
Confidence 456777777664
No 69
>2kqs_B Death domain-associated protein 6; SUMO, SIM, DAXX, nucleus, phosphoprotein, UBL conjugation PA apoptosis, transcription, transcription regulation; NMR {Homo sapiens}
Probab=36.77 E-value=19 Score=19.03 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=14.0
Q ss_pred cCCCceEEEEEeccCCc
Q 015684 39 RQNGEFKILQVADMHFA 55 (402)
Q Consensus 39 ~~~~~~~i~~iSDlH~~ 55 (402)
++-.+++++++||+|..
T Consensus 8 tqcdP~evivlsds~~~ 24 (26)
T 2kqs_B 8 TQCDPEEIIVLSDSDXX 24 (26)
T ss_pred ccCCcceEEEccccccc
Confidence 44578999999999964
No 70
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=35.80 E-value=76 Score=25.07 Aligned_cols=51 Identities=16% Similarity=0.232 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCCEEEEcC---CccCCCChhhHHHHHHHHHhHhHhCCCCEEEE
Q 015684 80 AFINRMISAEKPDLIVFTG---DNIFGFDATDAAKSLNAAFAPAIASNIPWVAV 130 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~G---Dli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v 130 (402)
..+...+...+||+|++.. |+..+.......+.+.++++.+.+.+.+++++
T Consensus 56 ~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~ 109 (185)
T 3hp4_A 56 RRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALM 109 (185)
T ss_dssp HHHHHHHHHHCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhhcCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 4444445455888777653 42222222333445555666555555555444
No 71
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=35.28 E-value=86 Score=23.63 Aligned_cols=49 Identities=16% Similarity=0.383 Sum_probs=31.5
Q ss_pred HHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 81 FINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 81 ~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
...+.++..+.-+||+++| +.... ....+. .+- ...++|++.++++-+.
T Consensus 27 ~v~kai~~gkakLViiA~D-~~~~~---~~~~l~-~lc--~~~~VP~~~v~sk~eL 75 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGD-IWPAD---VISHIP-VLC--EDHSVPYIFIPSKQDL 75 (121)
T ss_dssp HHHHHHHHSCCCEEEECTT-CSCTT---HHHHHH-HHH--HHTCCCEEECCCHHHH
T ss_pred HHHHHHHcCCceEEEEeCC-CCHHH---HHHHHH-HHH--HhcCCcEEEECCHHHH
Confidence 3556677789999999999 65322 122222 221 2479999999876554
No 72
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=34.84 E-value=1.2e+02 Score=21.66 Aligned_cols=49 Identities=14% Similarity=0.137 Sum_probs=29.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEE-cCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAV-LGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v-~GNHD~ 136 (402)
+...+.++..+.-+||++.| .. ++....+.. + ....++|++.. ..+-+.
T Consensus 21 ~~v~kai~~gka~lViiA~D-~~----~~~~~~i~~-~--c~~~~ip~~~~~~s~~eL 70 (99)
T 3j21_Z 21 NETIRLAKTGGAKLIIVAKN-AP----KEIKDDIYY-Y--AKLSDIPVYEFEGTSVEL 70 (99)
T ss_dssp HHHHHHHHHTCCSEEEEECC-CC----HHHHHHHHH-H--HHHTTCCEEEECCCSCGG
T ss_pred HHHHHHHHcCCccEEEEeCC-CC----HHHHHHHHH-H--HHHcCCCEEEeCCCHHHH
Confidence 34556677789999999999 32 222222222 1 12479998877 444443
No 73
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=33.84 E-value=1.1e+02 Score=22.47 Aligned_cols=44 Identities=23% Similarity=0.278 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcC
Q 015684 81 FINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLG 132 (402)
Q Consensus 81 ~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~G 132 (402)
...+.++..+.-+||++.| +. ++....+.. + ....++|++.+++
T Consensus 28 ~v~kai~~gka~lViiA~D-~~----~~~~~~l~~-~--c~~~~Vp~~~~~~ 71 (110)
T 3cpq_A 28 RTIKFVKHGEGKLVVLAGN-IP----KDLEEDVKY-Y--AKLSNIPVYQHKI 71 (110)
T ss_dssp HHHHHHHTTCCSEEEECTT-CB----HHHHHHHHH-H--HHHTTCCEEECCS
T ss_pred HHHHHHHcCCceEEEEeCC-CC----HHHHHHHHH-H--HHHcCCCEEEEcC
Confidence 3456667789999999999 42 222222222 2 2246999888743
No 74
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=32.63 E-value=1.2e+02 Score=21.81 Aligned_cols=45 Identities=18% Similarity=0.183 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLG 132 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~G 132 (402)
+...+.++..+..+||++.| .. ++....+.. + ....++|++.+.+
T Consensus 22 ~~v~kai~~gka~lViiA~D-~~----~~~~~~l~~-~--c~~~~vp~~~~~~ 66 (101)
T 1w41_A 22 RKSIQYAKMGGAKLIIVARN-AR----PDIKEDIEY-Y--ARLSGIPVYEFEG 66 (101)
T ss_dssp HHHHHHHHHTCCSEEEEETT-SC----HHHHHHHHH-H--HHHHTCCEEEESS
T ss_pred HHHHHHHHcCCCcEEEEeCC-CC----HHHHHHHHH-H--HHhcCCCEEEecC
Confidence 34556677789999999999 32 222222221 2 1235899887633
No 75
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=31.81 E-value=56 Score=24.46 Aligned_cols=50 Identities=16% Similarity=0.252 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
....+.++..+.-+||+++| +.. .........+- ...++|++++++.-+.
T Consensus 31 ~~v~kaI~~gka~LVvIA~D-~~p----~~i~~~l~~lC--~~~~VP~~~v~sk~~L 80 (113)
T 3jyw_G 31 NHVVALIENKKAKLVLIAND-VDP----IELVVFLPALC--KKMGVPYAIVKGKARL 80 (113)
T ss_dssp HHHHHTTTTTCCSEEEECSC-CSS----HHHHTTHHHHH--HHTTCCCEECSCSTTT
T ss_pred HHHHHHHHcCCceEEEEeCC-CCH----HHHHHHHHHHH--HHcCCCEEEECCHHHH
Confidence 34566777789999999999 542 22111112222 2479999999998776
No 76
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=30.57 E-value=63 Score=27.14 Aligned_cols=10 Identities=20% Similarity=0.740 Sum_probs=8.1
Q ss_pred cCCCEEEEcCC
Q 015684 89 EKPDLIVFTGD 99 (402)
Q Consensus 89 ~~pD~vv~~GD 99 (402)
..||+|+++ |
T Consensus 114 ~~PdlliV~-D 123 (208)
T 1vi6_A 114 REPEVVFVN-D 123 (208)
T ss_dssp CCCSEEEES-C
T ss_pred CCCCEEEEE-C
Confidence 479999988 5
No 77
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=28.43 E-value=68 Score=27.52 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=30.5
Q ss_pred HHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 86 ISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 86 i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
+.+...|+|++.|.. +-. .+...+.++.+.+..+|++.-|||.|.
T Consensus 32 ~~~~GtDaI~vGgs~---gvt---~~~~~~~v~~ik~~~~Piil~p~~~~~ 76 (235)
T 3w01_A 32 ICMSQTDAIMIGGTD---DVT---EDNVIHLMSKIRRYPLPLVLEISNIES 76 (235)
T ss_dssp HHTSSCSEEEECCSS---CCC---HHHHHHHHHHHTTSCSCEEEECCCSTT
T ss_pred HHHcCCCEEEECCcC---CcC---HHHHHHHHHHhcCcCCCEEEecCCHHH
Confidence 346789999999962 111 223445555554578999999999864
No 78
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=28.04 E-value=91 Score=24.05 Aligned_cols=47 Identities=15% Similarity=0.251 Sum_probs=28.6
Q ss_pred HHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCC
Q 015684 82 INRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (402)
Q Consensus 82 l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD 135 (402)
..+.++..+.-+||+++| +..... ...+. .+- ...++|++++.++-+
T Consensus 40 v~kai~~gkakLViiA~D-~~p~~~---~~~l~-~lc--~~~~VP~~~v~sk~e 86 (134)
T 2ale_A 40 ATKTLNRGISEFIIMAAD-CEPIEI---LLHLP-LLC--EDKNVPYVFVPSRVA 86 (134)
T ss_dssp HHHHHHHTCEEEEEEETT-CSSGGG---GTHHH-HHH--HHHTCCEEEESCHHH
T ss_pred HHHHHHhCCCeEEEEeCC-CCHHHH---HHHHH-HHH--HhcCCCEEEECCHHH
Confidence 445566678999999999 653211 11221 111 236999998866544
No 79
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=27.78 E-value=1.5e+02 Score=22.12 Aligned_cols=47 Identities=15% Similarity=0.242 Sum_probs=28.2
Q ss_pred HHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCC
Q 015684 82 INRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (402)
Q Consensus 82 l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD 135 (402)
..+.++..+..+||++.| +...........+ . ...++|+..++.+-+
T Consensus 35 v~kal~~gka~lViiA~D-~~~~~~~~~l~~l----c--~~~~Vp~~~~~sk~e 81 (119)
T 1rlg_A 35 TTKAVERGLAKLVYIAED-VDPPEIVAHLPLL----C--EEKNVPYIYVKSKND 81 (119)
T ss_dssp HHHHHTTTCCSEEEEESC-CSCSTTTTHHHHH----H--HHHTCCEEEESCHHH
T ss_pred HHHHHHcCCCcEEEEeCC-CChHHHHHHHHHH----H--HHcCCCEEEeCCHHH
Confidence 445566678999999999 6554312211111 1 135899877765544
No 80
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.53 E-value=57 Score=27.28 Aligned_cols=9 Identities=33% Similarity=0.737 Sum_probs=7.8
Q ss_pred cCCCEEEEc
Q 015684 89 EKPDLIVFT 97 (402)
Q Consensus 89 ~~pD~vv~~ 97 (402)
..||+|+++
T Consensus 110 ~~Pdllvv~ 118 (202)
T 3j20_B 110 FEPDVLIVT 118 (202)
T ss_dssp CCCSEEEES
T ss_pred cCCCeEEEe
Confidence 479999998
No 81
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=27.27 E-value=71 Score=27.70 Aligned_cols=37 Identities=27% Similarity=0.371 Sum_probs=21.9
Q ss_pred cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCE--------------EEEcCCCCC
Q 015684 89 EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPW--------------VAVLGNHDQ 136 (402)
Q Consensus 89 ~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~--------------~~v~GNHD~ 136 (402)
..||+|+++ | -. . .... +.+....+||+ |++|||-|.
T Consensus 150 ~~PdlliV~-D-p~----~-e~~A----I~EA~~lgIPvIalvDTn~dp~~VDy~IP~Ndds 200 (253)
T 3bch_A 150 REPRLLVVT-D-PR----A-DHQP----LTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKG 200 (253)
T ss_dssp CSCSEEEES-C-TT----T-THHH----HHHHHHTTCCEEEEECTTCCCTTCSEEEESCCSS
T ss_pred CCCCEEEEE-C-CC----c-cchH----HHHHHHhCCCEEEEEcCCCCcccCceEeecCCcc
Confidence 479999987 5 11 1 1222 33333478886 466888775
No 82
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=26.46 E-value=54 Score=28.26 Aligned_cols=37 Identities=27% Similarity=0.364 Sum_probs=22.1
Q ss_pred cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEE--------------EEcCCCCC
Q 015684 89 EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWV--------------AVLGNHDQ 136 (402)
Q Consensus 89 ~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~--------------~v~GNHD~ 136 (402)
..||+|+++ | .. .... .+.+....+||++ ++|||-|.
T Consensus 113 ~~PdlliV~-D-p~-----~e~~----ai~EA~~l~IPvIalvDTn~~p~~VDy~IP~Ndds 163 (241)
T 2xzm_B 113 EEPRVLIVT-D-PR-----SDFQ----AIKEASYVNIPVIALCDSDSPLAYVDVVIPCNNRS 163 (241)
T ss_dssp CCCSEEEES-C-TT-----TTHH----HHHHHTTTTCCEEECCCSSSCCTTCCEECCSCCSS
T ss_pred CCCCEEEEE-C-CC-----cchH----HHHHHHHhCCCEEEEecCCCCcccccEEEeCCCcc
Confidence 479999998 5 21 1122 2333334688874 66788774
No 83
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=25.91 E-value=1.8e+02 Score=20.85 Aligned_cols=46 Identities=17% Similarity=0.316 Sum_probs=28.7
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGN 133 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GN 133 (402)
+...+.++..+.-+||++.| .. +.....+... ....++|++.++.+
T Consensus 25 ~~v~kai~~gka~lViiA~D-~~----~~~~~~i~~~---c~~~~vp~~~~~s~ 70 (101)
T 3v7q_A 25 DLVIKEIRNARAKLVLLTED-AS----SNTAKKVTDK---CNYYKVPYKKVESR 70 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETT-SC----HHHHHHHHHH---HHHTTCCEEEESCH
T ss_pred hhhHHHHhcCceeEEEEecc-cc----ccchhhhccc---ccccCCCeeeechH
Confidence 34556677789999999999 43 2222222221 22478999988433
No 84
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=25.56 E-value=1.6e+02 Score=21.76 Aligned_cols=47 Identities=13% Similarity=0.203 Sum_probs=29.5
Q ss_pred HHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCC
Q 015684 81 FINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (402)
Q Consensus 81 ~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD 135 (402)
...+.++..+.-+||++.| .. +.....+.. + ....++|++.++|+-+
T Consensus 33 ~t~kai~~gkakLVilA~D-~~----~~~~~~i~~-~--c~~~~ipv~~~~~s~~ 79 (112)
T 3iz5_f 33 TVLKTLRSSLGKLIILANN-CP----PLRKSEIET-Y--AMLAKISVHHFHGNNV 79 (112)
T ss_dssp HHHHHHHTTCCSEEEECSC-CC----HHHHHHHHH-H--HHHTTCCEECCCCTTC
T ss_pred HHHHHHHcCCceEEEEeCC-CC----HHHHHHHHH-H--HHHcCCcEEEeCCCHH
Confidence 3456667789999999999 43 222222211 1 1237999999877654
No 85
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=25.51 E-value=1.3e+02 Score=22.63 Aligned_cols=49 Identities=14% Similarity=0.254 Sum_probs=29.1
Q ss_pred HHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 81 FINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 81 ~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
...+.++..+..+||++.| +....... .+. .+. ...++|+..++.+-+.
T Consensus 36 ~v~kai~~gka~lViiA~D-~~p~~~~~---~l~-~lc--~~~~VP~~~v~sk~eL 84 (120)
T 1xbi_A 36 EVTKAVERGIAKLVIIAED-VKPEEVVA---HLP-YLC--EEKGIPYAYVASKQDL 84 (120)
T ss_dssp HHHHHHHHTCCSEEEEESC-CSSGGGTT---THH-HHH--HHHTCCEEEESCHHHH
T ss_pred HHHHHHHcCCceEEEEcCC-CChHHHHH---HHH-HHH--HhcCCCEEEeCCHHHH
Confidence 3456666789999999999 65432111 111 111 1358998888665443
No 86
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=25.44 E-value=75 Score=27.55 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=23.1
Q ss_pred cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEE--------------EEcCCCCCC
Q 015684 89 EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWV--------------AVLGNHDQE 137 (402)
Q Consensus 89 ~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~--------------~v~GNHD~~ 137 (402)
..||+||++ | -- ..... +.+....+||++ ++|||.|..
T Consensus 116 ~~PdllvV~-D-p~-----~d~~a----i~EA~~l~IP~Ial~DTn~~p~~VD~~IP~Ndds~ 167 (252)
T 3u5c_A 116 KEPRLVIVT-D-PR-----SDAQA----IKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGK 167 (252)
T ss_dssp CCCSEEEES-C-TT-----TTHHH----HHHHHTTTCCEEEEECTTCCCTTCSSEEECCTTST
T ss_pred cCCceEEEe-C-Cc-----cchHH----HHHHHHcCCCEEEEEcCCCCcccCCEEEeCCCCCc
Confidence 579999998 5 11 11222 333334688875 678888863
No 87
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=25.17 E-value=1.2e+02 Score=23.50 Aligned_cols=12 Identities=42% Similarity=0.537 Sum_probs=7.3
Q ss_pred CCceEEEEEecc
Q 015684 41 NGEFKILQVADM 52 (402)
Q Consensus 41 ~~~~~i~~iSDl 52 (402)
+.++.++++-+.
T Consensus 33 ~a~l~ll~v~~~ 44 (170)
T 2dum_A 33 VGEVILLHVIDE 44 (170)
T ss_dssp CSEEEEEEEEET
T ss_pred CCEEEEEEEecC
Confidence 356677776553
No 88
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=25.04 E-value=1.6e+02 Score=21.77 Aligned_cols=48 Identities=15% Similarity=0.030 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhH-hCCCCEEEEcCC
Q 015684 79 TAFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAI-ASNIPWVAVLGN 133 (402)
Q Consensus 79 ~~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~-~~~iP~~~v~GN 133 (402)
.+.+.+.+++.++|+||+.-- - .+... +......+. ..++|+++++..
T Consensus 91 ~~~I~~~a~~~~~dliV~G~~-~--~~~~~----lgs~~~~vl~~~~~pVlvv~~~ 139 (141)
T 1jmv_A 91 GQVLSDAIEQYDVDLLVTGHH-Q--DFWSK----LMSSTRQVMNTIKIDMLVVPLR 139 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC-C--CCHHH----HHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHHHHHHHhcCCCEEEEeCC-C--chhhh----hcchHHHHHhcCCCCEEEeeCC
Confidence 355556666667777777644 1 11111 122222222 357788877753
No 89
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=24.96 E-value=43 Score=29.16 Aligned_cols=35 Identities=17% Similarity=0.322 Sum_probs=21.1
Q ss_pred EEEEcCCccCCCChhhHHHHHHHHHhHhHhCC-CCEEEEcCC
Q 015684 93 LIVFTGDNIFGFDATDAAKSLNAAFAPAIASN-IPWVAVLGN 133 (402)
Q Consensus 93 ~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~-iP~~~v~GN 133 (402)
-+++.|| +.+. ...+.++++.+...+ .-.++..|.
T Consensus 20 ~i~visD-iHg~-----~~~l~~~l~~~~~~~~~d~ii~~GD 55 (262)
T 2qjc_A 20 RVIIVGD-IHGC-----RAQLEDLLRAVSFKQGSDTLVAVGD 55 (262)
T ss_dssp CEEEECC-CTTC-----HHHHHHHHHHHTCCTTTSEEEECSC
T ss_pred eEEEEeC-CCCC-----HHHHHHHHHHHhccCCCCEEEEecC
Confidence 4788999 7643 234555555432222 368889995
No 90
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=24.91 E-value=1.6e+02 Score=21.11 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGN 133 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GN 133 (402)
+...+.++..+.-+||++.| ... .....+... ....++|++.++.+
T Consensus 24 ~~v~kai~~gka~lViiA~D-~~~----~~~~~i~~~---c~~~~ip~~~~~s~ 69 (101)
T 3on1_A 24 EQVVKAVQNGQVTLVILSSD-AGI----HTKKKLLDK---CGSYQIPVKVVGNR 69 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETT-SCH----HHHHHHHHH---HHHHTCCEEEESCH
T ss_pred HHHHHHHHcCCCcEEEEeCC-CCH----HHHHHHHHH---HHHcCCCEEEeCCH
Confidence 34556677789999999999 532 222222221 12368999877433
No 91
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=24.75 E-value=61 Score=24.72 Aligned_cols=13 Identities=23% Similarity=0.102 Sum_probs=8.1
Q ss_pred CCCCEEEEcCCCC
Q 015684 123 SNIPWVAVLGNHD 135 (402)
Q Consensus 123 ~~iP~~~v~GNHD 135 (402)
.++|+++++.+.|
T Consensus 138 ~~~pVlvv~~~~d 150 (150)
T 3tnj_A 138 AKCDVLAVRLRDD 150 (150)
T ss_dssp CSSEEEEEECCC-
T ss_pred CCCCEEEEeCCCC
Confidence 5677777776543
No 92
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=23.90 E-value=1.9e+02 Score=23.25 Aligned_cols=46 Identities=15% Similarity=0.274 Sum_probs=25.6
Q ss_pred HHHHHHHHHhcCC-CEEEEcC---CccC--CCChhhHHHHHHHHHhHhHhCC
Q 015684 79 TAFINRMISAEKP-DLIVFTG---DNIF--GFDATDAAKSLNAAFAPAIASN 124 (402)
Q Consensus 79 ~~~l~~~i~~~~p-D~vv~~G---Dli~--~~~~~~~~~~~~~~l~~~~~~~ 124 (402)
...+...+...+| |+|++.. |+.. +....+..+.+.++++.+.+.+
T Consensus 71 ~~~l~~~l~~~~p~d~vvi~~G~ND~~~~~~~~~~~~~~~l~~li~~~~~~~ 122 (216)
T 2q0q_A 71 ASYLPSCLATHLPLDLVIIMLGTNDTKAYFRRTPLDIALGMSVLVTQVLTSA 122 (216)
T ss_dssp HHHHHHHHHHHCSCSEEEEECCTGGGSGGGCCCHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHhCCCCCEEEEEecCcccchhcCCCHHHHHHHHHHHHHHHHHhc
Confidence 4556666666677 9887754 5322 2222334455666666665555
No 93
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=23.76 E-value=1.4e+02 Score=22.23 Aligned_cols=10 Identities=0% Similarity=0.252 Sum_probs=5.7
Q ss_pred CceEEEEEec
Q 015684 42 GEFKILQVAD 51 (402)
Q Consensus 42 ~~~~i~~iSD 51 (402)
.++.++++-+
T Consensus 31 a~l~ll~v~~ 40 (137)
T 2z08_A 31 ARLIVVHAYE 40 (137)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 4566666554
No 94
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=23.35 E-value=1.1e+02 Score=26.01 Aligned_cols=45 Identities=9% Similarity=0.135 Sum_probs=30.8
Q ss_pred HHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 86 ISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 86 i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
+.+...|++++.|=. +-. .+.+.+.++.+.+.++|++.-|||++.
T Consensus 27 ~~~~GtD~i~vGGs~---gvt---~~~~~~~v~~ik~~~~Pvvlfp~~~~~ 71 (228)
T 3vzx_A 27 LCESGTDAVIIGGSD---GVT---EDNVLRMMSKVRRFLVPCVLEVSAIEA 71 (228)
T ss_dssp HHTSSCSEEEECCCS---CCC---HHHHHHHHHHHTTSSSCEEEECSCGGG
T ss_pred HHHcCCCEEEECCcC---CCC---HHHHHHHHHHhhccCCCEEEeCCCHHH
Confidence 346789999999941 111 234445555555578999999999864
No 95
>3qax_A Probable ABC transporter arginine-binding protein; periplasmic, transport PR; HET: ARG; 2.00A {Chlamydophila pneumoniae} PDB: 3g41_A* 3n26_A*
Probab=22.72 E-value=21 Score=30.33 Aligned_cols=18 Identities=11% Similarity=-0.075 Sum_probs=10.7
Q ss_pred HHHHcCCeeEEEeccCCC
Q 015684 284 TMVAAGDVKAVFTGHDHV 301 (402)
Q Consensus 284 ~l~~~~~v~~v~~GH~H~ 301 (402)
..+..+++++++..-.-.
T Consensus 173 ~~l~~G~vDa~~~~~~~~ 190 (268)
T 3qax_A 173 MEVRYGKSPVAVLEPSVG 190 (268)
T ss_dssp HHHHTTSSSEEEECHHHH
T ss_pred HHHHcCCCCEEEecHHHH
Confidence 334555688877664443
No 96
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.27 E-value=2e+02 Score=20.64 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHhcCCCEEEEc----CCccCCCChhhHHHHHHHHHhHhHhCCCCEEEE
Q 015684 77 NTTAFINRMISAEKPDLIVFT----GDNIFGFDATDAAKSLNAAFAPAIASNIPWVAV 130 (402)
Q Consensus 77 ~~~~~l~~~i~~~~pD~vv~~----GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v 130 (402)
...+.+.+.+++.+++.||+. .| =+........+.+.+.+.. .++|+..+
T Consensus 38 ~~~~~l~~li~e~~v~~iVvGlP~~md-Gt~~~~~~~~~~f~~~L~~---~~lpV~~~ 91 (98)
T 1iv0_A 38 EDVEALLDFVRREGLGKLVVGLPLRTD-LKESAQAGKVLPLVEALRA---RGVEVELW 91 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCCCC-SSSCCCSSTTHHHHHHHHH---TTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCC-CCcCHHHHHHHHHHHHHhc---CCCCEEEE
Confidence 345778888889999999987 33 1122223334455555554 27888765
No 97
>2zkr_f 60S ribosomal protein L7A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.71 E-value=1.9e+02 Score=25.12 Aligned_cols=50 Identities=14% Similarity=0.307 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
......|+..+.-+||+++| +....... +...+.. ..+||++++.++-+.
T Consensus 141 keV~KaIekgkAkLVIIA~D-asP~ei~~----~Lp~LC~--~~~VPyi~v~sk~eL 190 (266)
T 2zkr_f 141 NTVTTLVENKKAQLVVIAHD-VDPIELVV----FLPALCR--KMGVPYCIIKGKARL 190 (266)
T ss_dssp HHHHHHHHTTCCSEEEEESC-CSSSTTTT----HHHHHHH--HHTCCEEEESCHHHH
T ss_pred HHHHHHHHhCCceEEEEecC-CCHHHHHH----HHHHHHH--hcCCCEEEECCHHHH
Confidence 34566677789999999999 65432111 1112211 358999999766554
No 98
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=21.68 E-value=1.5e+02 Score=22.07 Aligned_cols=48 Identities=15% Similarity=0.252 Sum_probs=28.5
Q ss_pred HHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 82 INRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 82 l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
..+.++..+..+||++.| +...... ..+.. + ....++|+..++.+-+.
T Consensus 37 v~kal~~gka~lViiA~D-~~~~~~~---~~l~~-l--c~~~~Vp~~~~~sk~eL 84 (120)
T 1vq8_F 37 TTKSIERGSAELVFVAED-VQPEEIV---MHIPE-L--ADEKGVPFIFVEQQDDL 84 (120)
T ss_dssp HHHHHHHTCCSEEEEESC-CSSGGGT---TTHHH-H--HHTTCCCEEEESCHHHH
T ss_pred HHHHHHcCCceEEEEeCC-CChHHHH---HHHHH-H--HHhcCCCEEEECCHHHH
Confidence 455566689999999999 6543211 11111 1 12368998877655443
No 99
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=21.65 E-value=1.4e+02 Score=23.74 Aligned_cols=51 Identities=16% Similarity=0.082 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCCEEEEcC---CccCCC---ChhhHHHHHHHHHhHhHhCCCCEEEE
Q 015684 80 AFINRMISAEKPDLIVFTG---DNIFGF---DATDAAKSLNAAFAPAIASNIPWVAV 130 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~G---Dli~~~---~~~~~~~~~~~~l~~~~~~~iP~~~v 130 (402)
..+...+...+||+|++.. |+.... ......+.+.++++.+.+.+.+++++
T Consensus 64 ~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~ 120 (204)
T 3p94_A 64 VRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFC 120 (204)
T ss_dssp HHHHHHTGGGCEEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 3344444456899888865 633321 22233445556666655566666555
No 100
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.54 E-value=93 Score=27.65 Aligned_cols=9 Identities=44% Similarity=0.803 Sum_probs=7.5
Q ss_pred cCCCEEEEc
Q 015684 89 EKPDLIVFT 97 (402)
Q Consensus 89 ~~pD~vv~~ 97 (402)
..||+||++
T Consensus 117 ~~PdlliV~ 125 (295)
T 2zkq_b 117 REPRLLVVT 125 (295)
T ss_dssp CCCSEEEES
T ss_pred cCCCeEEEe
Confidence 469999987
No 101
>3izc_H 60S ribosomal protein RPL8 (L7AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_H 3o58_H 3o5h_H 3u5e_G 3u5i_G 4b6a_G
Probab=21.43 E-value=1.7e+02 Score=25.27 Aligned_cols=50 Identities=16% Similarity=0.301 Sum_probs=31.3
Q ss_pred HHHHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 80 AFINRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
......++..+.-+||++.| +..... ..+...+. ...+||++++.++-|.
T Consensus 137 keV~KaIekgKAkLVVIA~D-adP~ei----vk~LpaLC--~k~gVPy~~V~sK~eL 186 (256)
T 3izc_H 137 NHVVALIENKKAKLVLIAND-VDPIEL----VVFLPALC--KKMGVPYAIVKGKARL 186 (256)
T ss_dssp HHHHHHHHHTCCSEEEEESC-CSSGGG----TTHHHHHH--HHHTCCEEEESCHHHH
T ss_pred HHHHHHHHhCcceEEEEeCC-CChHHH----HHHHHHHH--HhcCCCEEEECCHHHH
Confidence 34556667789999999999 653311 11111221 1369999999887654
No 102
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=21.36 E-value=90 Score=27.78 Aligned_cols=37 Identities=22% Similarity=0.453 Sum_probs=22.4
Q ss_pred cCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCE--------------EEEcCCCCC
Q 015684 89 EKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPW--------------VAVLGNHDQ 136 (402)
Q Consensus 89 ~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~--------------~~v~GNHD~ 136 (402)
..||+||++ | - ......+.+ ....+||+ |.||||.|.
T Consensus 121 ~ePdllvV~-D-p-----~~d~qAI~E----A~~lnIPtIALvDTnsdp~~VDy~IP~NDds 171 (305)
T 3iz6_A 121 SEPRLLILT-D-P-----RTDHQPIKE----SALGNIPTIAFCDTDSPMRYVDIGIPANNKG 171 (305)
T ss_dssp SCCSEEEES-C-T-----TTTHHHHHH----HHHHTCCEEEEECTTSCGGGCSEEEESCCSS
T ss_pred cCCceeEEe-C-c-----ccchHHHHH----HHHcCCCEEEEEcCCCCccccceEEeCCCCC
Confidence 579999998 5 1 112223322 23357786 478999886
No 103
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=21.36 E-value=1.9e+02 Score=23.89 Aligned_cols=46 Identities=20% Similarity=0.197 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHhcCC-CEEEEc-C--CccCCC--ChhhHHHHHHHHHhHhHh
Q 015684 77 NTTAFINRMISAEKP-DLIVFT-G--DNIFGF--DATDAAKSLNAAFAPAIA 122 (402)
Q Consensus 77 ~~~~~l~~~i~~~~p-D~vv~~-G--Dli~~~--~~~~~~~~~~~~l~~~~~ 122 (402)
..+..+...+...+| |+|++. | |+.... ...+..+.+.++++.+.+
T Consensus 87 ~~~~~l~~~l~~~~p~d~VvI~~GtND~~~~~~~~~~~~~~~l~~li~~ir~ 138 (232)
T 3dci_A 87 NGARALEVALSCHMPLDLVIIMLGTNDIKPVHGGRAEAAVSGMRRLAQIVET 138 (232)
T ss_dssp BHHHHHHHHHHHHCSCSEEEEECCTTTTSGGGTSSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhCCCCCEEEEEeccCCCccccCCCHHHHHHHHHHHHHHHHH
Confidence 345566666666777 887764 3 533221 222334455566665554
No 104
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=21.35 E-value=1e+02 Score=22.84 Aligned_cols=45 Identities=24% Similarity=0.329 Sum_probs=22.5
Q ss_pred HHHHHHHHhcCCCEEEEc--CCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcC
Q 015684 80 AFINRMISAEKPDLIVFT--GDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLG 132 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~--GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~G 132 (402)
+.+.+.+. ..-+.++++ ||=... + ...+.+..+.+.++++-++||
T Consensus 70 ~~i~~~~~-~G~~V~~l~d~GdP~i~-~------~~~~l~~~~~~~gi~v~viPG 116 (117)
T 3hh1_A 70 RQVIELLE-EGSDVALVTDAGTPAIS-D------PGYTMASAAHAAGLPVVPVPG 116 (117)
T ss_dssp HHHHHHHH-TTCCEEEEEETTSCGGG-S------TTHHHHHHHHHTTCCEEEEC-
T ss_pred HHHHHHHH-CCCeEEEEecCCcCeEe-c------cHHHHHHHHHHCCCcEEEeCC
Confidence 33444443 344666665 992211 1 111223333346899999998
No 105
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=21.24 E-value=1.6e+02 Score=24.04 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=13.2
Q ss_pred HHHHHHHHhcCCCEEEEcCC
Q 015684 80 AFINRMISAEKPDLIVFTGD 99 (402)
Q Consensus 80 ~~l~~~i~~~~pD~vv~~GD 99 (402)
+.+.+.++..+.|+||.+|=
T Consensus 68 ~al~~a~~~~~~DlVIttGG 87 (189)
T 1jlj_A 68 ETLIDWCDEKELNLILTTGG 87 (189)
T ss_dssp HHHHHHHHTSCCSEEEEESC
T ss_pred HHHHHHhhcCCCCEEEEcCC
Confidence 33444443347999999997
No 106
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=20.64 E-value=1.3e+02 Score=25.97 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=23.9
Q ss_pred EEEcCCccCCCC-------hhhHHHHHHHHHhHhHhCCCCEEEEcCCCCC
Q 015684 94 IVFTGDNIFGFD-------ATDAAKSLNAAFAPAIASNIPWVAVLGNHDQ 136 (402)
Q Consensus 94 vv~~GDli~~~~-------~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD~ 136 (402)
++++||++.... .+.....+.+.++.+...+.-+ ++|| |-.
T Consensus 197 ~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~l~~~~-v~pg-Hg~ 244 (294)
T 3m8t_A 197 VLFFCSGTVALNRLVGQPTYAGIVDDYRATFAKAKAMKIDV-LLGP-HPE 244 (294)
T ss_dssp EEECCCCCCTTCCCSSSCSSTTHHHHHHHHHHHHHHSCCSE-EECS-SGG
T ss_pred EEEEcCccCCCCcCcCCCCCCchHHHHHHHHHHHHCCCCCE-EEcC-CCC
Confidence 889999643321 1223445556666665566656 5888 754
No 107
>2yad_A Surfactant protein C brichos domain; pulmonary surfactant system, interstitial LUNG disease, AMYL chaperone; HET: MSE; 2.20A {Homo sapiens}
Probab=20.25 E-value=17 Score=28.33 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=25.6
Q ss_pred CCcccceeeeecCCCCceEEEEEeccCcccccc
Q 015684 365 LTGVDGHVLWSKTSSGNLRLCMVNKMDLQPISA 397 (402)
Q Consensus 365 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (402)
.+++|+|-++=.----+|+-|.+-|||-|-|-+
T Consensus 75 tvVyDYqhllIAyrpapg~aCYImKMdpesIPs 107 (171)
T 2yad_A 75 LVVYDYQQLLIAYKPAPGTCCYIMKIAPESIPS 107 (171)
T ss_dssp EEEEETTTTEEEEESSTTSCEEEEECCTTCCCC
T ss_pred cEEEEecceeEEeccCCCceEEEEeeChhhCcC
Confidence 468888866655555678899999999998764
No 108
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=20.17 E-value=2.3e+02 Score=23.17 Aligned_cols=52 Identities=6% Similarity=0.076 Sum_probs=26.1
Q ss_pred HHHHHHHHHh-cCCCEEEEc-C--CccC----CCChhhHHHHHHHHHhHhHhCCCCEEEE
Q 015684 79 TAFINRMISA-EKPDLIVFT-G--DNIF----GFDATDAAKSLNAAFAPAIASNIPWVAV 130 (402)
Q Consensus 79 ~~~l~~~i~~-~~pD~vv~~-G--Dli~----~~~~~~~~~~~~~~l~~~~~~~iP~~~v 130 (402)
...+...+.. .+||+|++. | |+.. .....+..+.+.++++.+.+.+.+++++
T Consensus 60 ~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~ 119 (240)
T 3mil_A 60 LKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIII 119 (240)
T ss_dssp HHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 3444455544 478877664 3 5321 1112233445666666665556554443
No 109
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=20.01 E-value=1.6e+02 Score=22.13 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=27.9
Q ss_pred HHHHHHhcCCCEEEEcCCccCCCChhhHHHHHHHHHhHhHhCCCCEEEEcCCCC
Q 015684 82 INRMISAEKPDLIVFTGDNIFGFDATDAAKSLNAAFAPAIASNIPWVAVLGNHD 135 (402)
Q Consensus 82 l~~~i~~~~pD~vv~~GDli~~~~~~~~~~~~~~~l~~~~~~~iP~~~v~GNHD 135 (402)
..+.++..+..+||++.| +....... .+.. + ....++|+..++.+-+
T Consensus 36 v~kal~~gka~lViiA~D-~~~~~~~~---~l~~-l--c~~~~Vp~~~v~sk~e 82 (124)
T 2fc3_A 36 TTKAVERGLAKLVVIAED-VDPPEIVM---HLPL-L--CDEKKIPYVYVPSKKR 82 (124)
T ss_dssp HHHHHHTTCCSEEEEETT-CSSGGGTT---THHH-H--HHHTTCCEEEESCHHH
T ss_pred HHHHHHcCCceEEEEcCC-CChHHHHH---HHHH-H--HHHcCCCEEEECCHHH
Confidence 445566678999999999 65432111 1111 1 1136899887765544
Done!