Query 015690
Match_columns 402
No_of_seqs 394 out of 2512
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 16:59:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015690.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015690hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 1.2E-66 4.2E-71 510.3 19.6 273 2-344 32-315 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 1.8E-64 6.3E-69 477.6 23.6 240 99-340 7-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 1.7E-47 5.9E-52 345.1 18.8 180 103-345 2-181 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 1.5E-45 5E-50 332.4 20.5 178 102-344 2-180 (180)
5 1c3g_A Heat shock protein 40; 100.0 4E-42 1.4E-46 307.2 15.8 169 104-340 1-170 (170)
6 1xao_A YDJ1, mitochondrial pro 100.0 2.8E-29 9.7E-34 211.5 13.3 118 249-369 1-120 (121)
7 3i38_A Putative chaperone DNAJ 99.9 2.1E-26 7E-31 190.3 10.1 95 245-345 2-96 (109)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 6.5E-24 2.2E-28 173.8 3.4 86 1-86 6-98 (103)
9 1hdj_A Human HSP40, HDJ-1; mol 99.8 5.6E-22 1.9E-26 153.7 5.0 65 2-66 7-74 (77)
10 2ctr_A DNAJ homolog subfamily 99.8 1.2E-21 4.3E-26 155.6 5.8 66 2-67 11-79 (88)
11 2ctt_A DNAJ homolog subfamily 99.8 1.9E-21 6.6E-26 159.4 6.5 102 103-211 1-103 (104)
12 2o37_A Protein SIS1; HSP40, J- 99.8 1.4E-21 4.9E-26 156.6 5.1 66 2-67 12-78 (92)
13 2och_A Hypothetical protein DN 99.8 1.7E-21 5.8E-26 149.4 4.9 61 2-62 12-73 (73)
14 2ej7_A HCG3 gene; HCG3 protein 99.8 2.3E-21 8E-26 152.0 4.7 64 2-65 13-81 (82)
15 2dn9_A DNAJ homolog subfamily 99.8 3E-21 1E-25 150.3 4.8 62 2-63 11-76 (79)
16 2ctp_A DNAJ homolog subfamily 99.8 3.4E-21 1.2E-25 149.6 4.0 62 2-63 11-75 (78)
17 2dmx_A DNAJ homolog subfamily 99.8 4.5E-21 1.5E-25 153.7 4.7 65 2-66 13-82 (92)
18 2cug_A Mkiaa0962 protein; DNAJ 99.8 6.9E-21 2.4E-25 151.3 4.2 62 2-63 21-85 (88)
19 2lgw_A DNAJ homolog subfamily 99.8 5.9E-21 2E-25 155.0 3.5 65 2-66 6-75 (99)
20 2ctq_A DNAJ homolog subfamily 99.8 1.3E-20 4.4E-25 156.5 3.4 64 2-65 24-91 (112)
21 2ctw_A DNAJ homolog subfamily 99.8 1.9E-20 6.5E-25 154.7 4.2 64 2-65 21-88 (109)
22 2yua_A Williams-beuren syndrom 99.8 3E-20 1E-24 150.9 5.3 58 2-59 21-82 (99)
23 1faf_A Large T antigen; J doma 99.8 2.3E-20 8E-25 145.1 2.9 61 2-63 15-77 (79)
24 1gh6_A Large T antigen; tumor 99.8 2E-20 6.7E-25 155.4 1.0 60 2-61 12-73 (114)
25 3apq_A DNAJ homolog subfamily 99.8 1.3E-19 4.6E-24 165.9 3.8 82 2-86 6-91 (210)
26 2pf4_E Small T antigen; PP2A, 99.8 4.1E-20 1.4E-24 163.7 0.3 60 2-61 15-76 (174)
27 1wjz_A 1700030A21RIK protein; 99.8 8.9E-20 3E-24 146.6 2.2 60 2-61 20-89 (94)
28 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 2E-19 6.7E-24 148.6 2.2 60 2-61 19-86 (109)
29 2ys8_A RAB-related GTP-binding 99.7 2.6E-18 8.9E-23 136.9 4.7 54 2-55 31-87 (90)
30 2guz_A Mitochondrial import in 99.7 4.7E-18 1.6E-22 129.4 4.4 53 2-54 18-71 (71)
31 2l6l_A DNAJ homolog subfamily 99.7 4.1E-18 1.4E-22 149.5 4.4 60 2-61 14-83 (155)
32 1iur_A KIAA0730 protein; DNAJ 99.7 5.5E-18 1.9E-22 134.2 2.9 54 2-55 20-78 (88)
33 2qwo_B Putative tyrosine-prote 99.6 1.9E-17 6.5E-22 131.7 1.7 48 2-49 37-91 (92)
34 1fpo_A HSC20, chaperone protei 99.6 9E-17 3.1E-21 142.9 2.6 59 2-60 5-74 (171)
35 3ag7_A Putative uncharacterize 99.6 8.6E-17 2.9E-21 131.7 1.8 50 2-52 45-105 (106)
36 3hho_A CO-chaperone protein HS 99.6 1.5E-16 5E-21 142.0 2.8 58 2-59 8-76 (174)
37 3bvo_A CO-chaperone protein HS 99.6 1.9E-16 6.7E-21 144.8 2.6 57 2-58 47-114 (207)
38 3apo_A DNAJ homolog subfamily 99.6 9.8E-17 3.4E-21 173.9 -0.0 82 2-86 25-110 (780)
39 3uo3_A J-type CO-chaperone JAC 99.6 4.8E-16 1.7E-20 139.3 2.3 59 2-60 15-81 (181)
40 1exk_A DNAJ protein; extended 99.5 4E-14 1.4E-18 109.7 7.8 77 120-203 1-78 (79)
41 1nlt_A Protein YDJ1, mitochond 99.3 1.6E-12 5.4E-17 122.3 8.2 129 116-257 42-246 (248)
42 2guz_B Mitochondrial import in 99.1 6.9E-11 2.4E-15 87.6 4.0 48 2-49 8-58 (65)
43 3i38_A Putative chaperone DNAJ 98.8 1.9E-09 6.5E-14 88.5 3.8 51 207-258 40-90 (109)
44 1xao_A YDJ1, mitochondrial pro 98.6 1.6E-08 5.6E-13 84.4 3.7 53 206-258 35-92 (121)
45 1n4c_A Auxilin; four helix bun 98.6 1.1E-08 3.9E-13 90.9 2.8 32 2-33 121-152 (182)
46 1c3g_A Heat shock protein 40; 98.5 1.6E-07 5.4E-12 83.1 7.7 73 255-330 1-81 (170)
47 2q2g_A HSP40 protein, heat sho 98.5 1.9E-07 6.5E-12 83.3 7.9 75 254-331 3-88 (180)
48 3agx_A DNAJ homolog subfamily 98.4 4.6E-07 1.6E-11 80.9 8.5 75 254-332 2-89 (181)
49 3lz8_A Putative chaperone DNAJ 98.4 2E-07 6.9E-12 90.8 6.4 76 252-330 138-226 (329)
50 2ctt_A DNAJ homolog subfamily 98.0 3.7E-06 1.3E-10 68.1 4.8 58 116-187 32-95 (104)
51 1exk_A DNAJ protein; extended 98.0 3.1E-06 1.1E-10 64.9 3.8 57 116-186 15-77 (79)
52 3lcz_A YCZA, inhibitor of trap 97.8 4.9E-06 1.7E-10 58.8 0.6 33 170-204 6-38 (53)
53 3pmq_A Decaheme cytochrome C M 97.5 1.7E-06 5.8E-11 91.0 -7.5 78 107-184 168-257 (669)
54 2bx9_A Anti-trap, AT, tryptoph 97.0 0.0004 1.4E-08 48.9 3.0 26 131-158 10-35 (53)
55 3lcz_A YCZA, inhibitor of trap 97.0 0.0004 1.4E-08 48.9 2.9 25 131-157 10-34 (53)
56 2bx9_A Anti-trap, AT, tryptoph 96.7 0.00071 2.4E-08 47.6 2.0 27 147-186 10-36 (53)
57 2y4t_A DNAJ homolog subfamily 95.7 0.0066 2.2E-07 59.2 4.0 33 2-34 386-418 (450)
58 2vl6_A SSO MCM N-TER, minichro 56.8 35 0.0012 31.3 8.2 14 14-27 9-22 (268)
59 1ltl_A DNA replication initiat 53.6 53 0.0018 30.2 9.0 15 9-23 8-22 (279)
60 3jt0_A Lamin-B1; structural ge 48.0 28 0.00096 29.1 5.4 51 269-322 52-102 (144)
61 3pmq_A Decaheme cytochrome C M 41.5 3.9 0.00013 43.0 -1.1 47 147-200 192-257 (669)
62 1uzc_A Hypothetical protein FL 36.7 26 0.00089 25.6 3.0 53 8-60 10-66 (71)
63 3hn9_A Lamin-B1; structural ge 35.7 60 0.002 26.2 5.4 39 269-308 39-77 (123)
64 1qo8_A Flavocytochrome C3 fuma 35.5 5 0.00017 41.1 -1.5 66 132-199 14-86 (566)
65 2bx2_L Ribonuclease E, RNAse E 35.5 7.6 0.00026 39.6 -0.1 26 161-186 396-421 (517)
66 2rq5_A Protein jumonji; develo 32.3 14 0.00047 30.0 1.0 22 37-58 90-111 (121)
67 2qkd_A Zinc finger protein ZPR 31.0 34 0.0012 33.6 3.7 67 147-225 13-112 (404)
68 2lll_A Lamin-B2; immunoglobuli 30.5 68 0.0023 26.5 5.0 50 269-321 48-98 (139)
69 1ifr_A Lamin A/C; immunoglobul 29.4 83 0.0028 25.3 5.2 51 268-321 32-83 (121)
70 2jrp_A Putative cytoplasmic pr 29.3 1.1E+02 0.0037 22.9 5.4 24 131-154 3-26 (81)
71 1y0p_A Fumarate reductase flav 29.1 6.7 0.00023 40.1 -1.8 65 132-198 13-88 (571)
72 1sif_A Ubiquitin; hydrophobic 28.9 44 0.0015 24.8 3.3 25 268-292 6-30 (88)
73 2b7e_A PRE-mRNA processing pro 28.8 30 0.001 24.3 2.1 48 13-60 3-56 (59)
74 2vf7_A UVRA2, excinuclease ABC 27.4 24 0.00083 38.1 2.1 33 148-184 640-672 (842)
75 1ny9_A Transcriptional activat 26.8 65 0.0022 26.3 4.3 53 5-61 71-124 (143)
76 3j20_Y 30S ribosomal protein S 26.7 66 0.0023 21.6 3.5 8 173-180 37-44 (50)
77 3vdz_A Ubiquitin-40S ribosomal 26.3 46 0.0016 26.0 3.1 40 253-292 14-56 (111)
78 2ftc_B Mitochondrial ribosomal 25.3 2.8E+02 0.0096 22.7 8.5 70 207-292 24-107 (136)
79 1ufg_A Lamin A, nuclear lamin; 23.4 1.3E+02 0.0044 25.2 5.5 50 269-321 64-114 (151)
80 3nyb_B Protein AIR2; polya RNA 23.2 41 0.0014 25.2 2.1 53 129-186 4-59 (83)
81 1mli_A Muconolactone isomerase 23.0 84 0.0029 24.3 3.9 23 319-341 3-25 (96)
82 2r6f_A Excinuclease ABC subuni 22.9 40 0.0014 37.0 2.8 33 148-184 755-787 (972)
83 1gmu_A UREE; metallochaperone; 20.3 1.9E+02 0.0063 23.8 5.9 45 259-304 16-60 (143)
84 2d7l_A WD repeat and HMG-box D 20.0 41 0.0014 24.9 1.5 43 16-58 17-59 (81)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=1.2e-66 Score=510.27 Aligned_cols=273 Identities=26% Similarity=0.397 Sum_probs=158.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHhhCCccccccccccccccccccCC-------CC
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMG-------GG 71 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~---~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~g~~-------~~ 71 (402)
+||||+++||.+|||+|||+||++||||+|++ +++|++|++||+||+||++|+.||+|+..+..++++ ++
T Consensus 32 ~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~~~~~ 111 (329)
T 3lz8_A 32 AILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQTHEQS 111 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccccccccCC
Confidence 79999999999999999999999999999975 489999999999999999999999995443221111 11
Q ss_pred CCCCCCcccccccccCCCCCCCCCCCccccCCcceeeccccccccccccccceecceeeeecCCccCCCcccCceeeCCC
Q 015690 72 GGAHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSG 151 (402)
Q Consensus 72 ~~~~d~~diF~~~Fgg~~~gg~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~ 151 (402)
.++.++.|||++|||+++++ ++.++++++.|+.+.|.|||+|+|+|+++++.+++.+.|
T Consensus 112 f~~~~f~diF~~~Fg~~g~~---~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~------------------ 170 (329)
T 3lz8_A 112 YSQQDFDDIFSSMFGQQAHQ---RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN------------------ 170 (329)
T ss_dssp ----------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC------------------
T ss_pred cCCCchhhhhHhhhcCcCCC---CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec------------------
Confidence 11235679999999853211 112335689999999999999999999999998876532
Q ss_pred CcCCceEEEEEecCCceeeEeeeeCCCCCCcceEEcCCCCCCccCCccEEEEcEEEEEEecCCCcCCCEEecCCCcCCC-
Q 015690 152 CQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEA- 230 (402)
Q Consensus 152 C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~geG~~~- 230 (402)
|.| .+ ++...++++|+||||+++|++|+|+|+|++.
T Consensus 171 --g~G---------------------------~v--------------~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~ 207 (329)
T 3lz8_A 171 --VFG---------------------------MI--------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTPGE 207 (329)
T ss_dssp --SCC----------------------------C--------------CEEEEEEEEEEECTTCCTTCEEEESSCSCCC-
T ss_pred --CCe---------------------------EE--------------EEecceEEEEeCCCCCCCCCEEEEcccccCCC
Confidence 112 11 1233568999999999999999999999985
Q ss_pred CCCCCccEEEEEEEecCCCccccCCceeeeeccCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCC
Q 015690 231 PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY 310 (402)
Q Consensus 231 ~g~~~GDliv~i~v~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~ 310 (402)
+++.+|||||+|+++||+.|+|+|+||+++++|+|+|||+|+++.|+||||+ +.|+||+| ++||++++|+|+|||..
T Consensus 208 ~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~rl~G~GmP~~ 284 (329)
T 3lz8_A 208 NGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK 284 (329)
T ss_dssp --CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS
T ss_pred CCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEEEcCCCCCCC
Confidence 4678999999999999999999999999999999999999999999999998 68999999 69999999999999975
Q ss_pred CCCCCCCcEEEEEEEeCCCCCCHHHHHHHHhhCC
Q 015690 311 QRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 344 (402)
Q Consensus 311 ~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~l~ 344 (402)
..+|||||+|+|.||++|+++|+++|+++..
T Consensus 285 ---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 285 ---THTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp ---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred ---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 3699999999999999999999999999875
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=1.8e-64 Score=477.60 Aligned_cols=240 Identities=45% Similarity=0.868 Sum_probs=220.2
Q ss_pred cccCCcceeeccccccccccccccceecceeeeecCCccCCCcccCceeeCCCCcCCceEEEEEecCCceeeEeeeeCCC
Q 015690 99 RQRRGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNE 178 (402)
Q Consensus 99 ~~~~g~d~~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~ 178 (402)
+++++.|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|+|++.++..+|+.|+|+|+++..+++|| |+++++.+|+.
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 34679999999999999999999999999999999999999999887789999999999999999999 99999999999
Q ss_pred CCCcceEEcCCCCCCccCCccEEEEcEEEEEEecCCCcCCCEEecCCCcCCCCCCCCccEEEEEEEecCCCccccCCcee
Q 015690 179 CKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF 258 (402)
Q Consensus 179 C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~geG~~~~g~~~GDliv~i~v~~h~~f~R~g~dL~ 258 (402)
|+|+|.++.++++|+.|+|++++.+.++|+|+|||||++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 99999999888999999999999999999999999999999999999999988889999999999999999999999999
Q ss_pred eeeccCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEEEEEeCCCC--CCHHHH
Q 015690 259 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQC 336 (402)
Q Consensus 259 ~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~V~~P~~--l~~~~~ 336 (402)
++++|||+|||+|+++.|+||||+.+.|+||||++++||++++|+|+|||..+++ .+|||||+|+|.||++ ||++|+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 9999999999999999999999988999999999999999999999999987555 6899999999999999 999998
Q ss_pred HHHH
Q 015690 337 KMLE 340 (402)
Q Consensus 337 ~~l~ 340 (402)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 8875
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=1.7e-47 Score=345.10 Aligned_cols=180 Identities=39% Similarity=0.682 Sum_probs=159.6
Q ss_pred CcceeeccccccccccccccceecceeeeecCCccCCCcccCceeeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCc
Q 015690 103 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGT 182 (402)
Q Consensus 103 g~d~~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 182 (402)
+.|+.+.|.|||+|+|+|+++++.+++ .|+
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~------------------~c~-------------------------------- 31 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH------------------KRL-------------------------------- 31 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE------------------EEE--------------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec------------------ccC--------------------------------
Confidence 368899999999999999999986542 122
Q ss_pred ceEEcCCCCCCccCCccEEEEcEEEEEEecCCCcCCCEEecCCCcCCCCCCCCccEEEEEEEecCCCccccCCceeeeec
Q 015690 183 GETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 262 (402)
Q Consensus 183 G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~geG~~~~g~~~GDliv~i~v~~h~~f~R~g~dL~~~~~ 262 (402)
.|+|++++.+.++++|+||||+++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 32 -----------~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (181)
T 3agx_A 32 -----------NPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR 100 (181)
T ss_dssp -----------CTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred -----------CCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence 233333556789999999999999999999999999888899999999999999999999999999999
Q ss_pred cCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHHhh
Q 015690 263 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETV 342 (402)
Q Consensus 263 I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~~~ 342 (402)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+++
T Consensus 101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~ 178 (181)
T 3agx_A 101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQV 178 (181)
T ss_dssp EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHH
T ss_pred cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHh
Confidence 99999999999999999999899999987 7999999999999998765567899999999999999999999999999
Q ss_pred CCC
Q 015690 343 LPP 345 (402)
Q Consensus 343 l~~ 345 (402)
||+
T Consensus 179 ~~~ 181 (181)
T 3agx_A 179 LPI 181 (181)
T ss_dssp SCC
T ss_pred ccC
Confidence 963
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-45 Score=332.36 Aligned_cols=178 Identities=37% Similarity=0.659 Sum_probs=164.4
Q ss_pred CCcceeeccccccccccccccceecceeeeecCCccCCCcccCceeeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCC
Q 015690 102 RGEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 181 (402)
Q Consensus 102 ~g~d~~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 181 (402)
++.|+.+.|.|||+|+|+|+++++.+++.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 3679999999999999999999999999888741
Q ss_pred cceEEcCCCCCCccCCccEEEEcEEEEEEecCCCcCCCEEecCCCcCC-CCCCCCccEEEEEEEecCCCccccCCceeee
Q 015690 182 TGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVE 260 (402)
Q Consensus 182 ~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~geG~~-~~g~~~GDliv~i~v~~h~~f~R~g~dL~~~ 260 (402)
+++.+.++++|+|||||++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++
T Consensus 36 -----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~ 98 (180)
T 2q2g_A 36 -----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMK 98 (180)
T ss_dssp -----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEE
T ss_pred -----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEE
Confidence 2445678999999999999999999999999 7899999999999999999999999999999
Q ss_pred eccCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHH
Q 015690 261 HTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 340 (402)
Q Consensus 261 ~~I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~ 340 (402)
++|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus 99 ~~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 176 (180)
T 2q2g_A 99 VTIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIK 176 (180)
T ss_dssp EEEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHH
T ss_pred EEcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHH
Confidence 9999999999999999999999899999988 79999999999999987666679999999999999999999999999
Q ss_pred hhCC
Q 015690 341 TVLP 344 (402)
Q Consensus 341 ~~l~ 344 (402)
++||
T Consensus 177 ~~~p 180 (180)
T 2q2g_A 177 EALD 180 (180)
T ss_dssp HHC-
T ss_pred HhcC
Confidence 9985
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=4e-42 Score=307.16 Aligned_cols=169 Identities=36% Similarity=0.597 Sum_probs=153.3
Q ss_pred cceeeccccccccccccccceecceeeeecCCccCCCcccCceeeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcc
Q 015690 104 EDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTG 183 (402)
Q Consensus 104 ~d~~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 183 (402)
+|+.+.|.|||+|+|+|+++++.+.+.. + .|
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~------------------~G--------------------------- 31 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P------------------HG--------------------------- 31 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T------------------TT---------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C------------------CC---------------------------
Confidence 3788999999999999999999887641 0 01
Q ss_pred eEEcCCCCCCccCCccEEEEcEEEEEEecCCCcCCCEEecCCCcCC-CCCCCCccEEEEEEEecCCCccccCCceeeeec
Q 015690 184 ETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADE-APDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHT 262 (402)
Q Consensus 184 ~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~geG~~-~~g~~~GDliv~i~v~~h~~f~R~g~dL~~~~~ 262 (402)
.+ +.++++|+||||+++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 32 ----------------~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~ 94 (170)
T 1c3g_A 32 ----------------AS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94 (170)
T ss_dssp ----------------EE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred ----------------cE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence 22 568899999999999999999999995 788999999999999999999999999999999
Q ss_pred cCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEEEEEeCCCCCCHHHHHHHH
Q 015690 263 LSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 340 (402)
Q Consensus 263 I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~V~~P~~l~~~~~~~l~ 340 (402)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|.||++||++|+++|+
T Consensus 95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999999999998889999988 79999999999999987666678999999999999999999988763
No 6
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-29 Score=211.49 Aligned_cols=118 Identities=37% Similarity=0.596 Sum_probs=101.5
Q ss_pred CccccCCceeeeeccCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEEEEEeCC
Q 015690 249 KFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP 328 (402)
Q Consensus 249 ~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~V~~P 328 (402)
.|+|+|+||+++++|+|++||+|+++.|+||||+.+.|+||||+|++||++++|+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 49999999999999999999999999999999998999999999999999999999999987555 68999999999999
Q ss_pred CC--CCHHHHHHHHhhCCCCCCCCCccCcccccceeeeccCCh
Q 015690 329 ES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNI 369 (402)
Q Consensus 329 ~~--l~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (402)
++ |+++|+++|+++++..+. .. ....+++|++.|.++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~~~-~~-~~~~~~~ee~~~~~~~~ 120 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPRIV-PA-IPKKATVDECVLADFDP 120 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCCCC-CC-CCTTSCEEEEECEECCC
T ss_pred CCCCCCHHHHHHHHHHcccccc-cC-CCCCCCceEEEeeccCC
Confidence 99 999999999999987653 11 13346778888988875
No 7
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.93 E-value=2.1e-26 Score=190.31 Aligned_cols=95 Identities=20% Similarity=0.332 Sum_probs=88.1
Q ss_pred ecCCCccccCCceeeeeccCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEEEE
Q 015690 245 KEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFT 324 (402)
Q Consensus 245 ~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~ 324 (402)
+||+.|+|+|+||+++++|||+|||+|+++.|+||||+ +.|+||+| ++||++++|+|+|||.. + .+|||||+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~-~--~~GDL~v~~~ 75 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK-T--HTGDLFAVIK 75 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS-S--CBCCEEEEEE
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCC-C--CCcCEEEEEE
Confidence 68999999999999999999999999999999999995 89999999 79999999999999973 2 6999999999
Q ss_pred EeCCCCCCHHHHHHHHhhCCC
Q 015690 325 VDFPESLSPDQCKMLETVLPP 345 (402)
Q Consensus 325 V~~P~~l~~~~~~~l~~~l~~ 345 (402)
|.||++|+++|+++|++++..
T Consensus 76 V~~P~~Ls~~q~~~l~~l~~~ 96 (109)
T 3i38_A 76 IVMPTKPDEKARELWQQLAAA 96 (109)
T ss_dssp ECCCSSCCHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999853
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.88 E-value=6.5e-24 Score=173.83 Aligned_cols=86 Identities=45% Similarity=0.793 Sum_probs=62.6
Q ss_pred CcccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHhhCCccccccccccccccccccCCCCC---C
Q 015690 1 MRFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGG---G 73 (402)
Q Consensus 1 ~~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~g~~~~~---~ 73 (402)
.+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|+.++..+..+++ +
T Consensus 6 y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~~~~~ 85 (103)
T 1bq0_A 6 YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGG 85 (103)
T ss_dssp TTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC--------
T ss_pred HHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCCCCCC
Confidence 379999999999999999999999999999974 379999999999999999999999999988875321111 1
Q ss_pred CCCCccccccccc
Q 015690 74 AHDPFDIFQSFFG 86 (402)
Q Consensus 74 ~~d~~diF~~~Fg 86 (402)
+.++.++|+.||+
T Consensus 86 ~~~~~~~f~~~f~ 98 (103)
T 1bq0_A 86 GADFSDIFGDVFG 98 (103)
T ss_dssp -------------
T ss_pred CCCHHHHHHHHHH
Confidence 2355677887776
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=5.6e-22 Score=153.68 Aligned_cols=65 Identities=52% Similarity=0.925 Sum_probs=61.2
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHhhCCccccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 66 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~---~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~ 66 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||++|.+++.+
T Consensus 7 ~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 7 QTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 69999999999999999999999999999975 489999999999999999999999999988764
No 10
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.2e-21 Score=155.64 Aligned_cols=66 Identities=44% Similarity=0.708 Sum_probs=62.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHhhCCcccccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 67 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~---~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~g 67 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.++
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 11 DILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 68999999999999999999999999999986 3799999999999999999999999999887754
No 11
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.9e-21 Score=159.36 Aligned_cols=102 Identities=27% Similarity=0.597 Sum_probs=90.3
Q ss_pred CcceeeccccccccccccccceecceeeeecCCccCCCcccCce-eeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCC
Q 015690 103 GEDVIHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKG 181 (402)
Q Consensus 103 g~d~~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G 181 (402)
|.++.+.|.|||+|+|+|+++++.+.+.+.|+.|+|+|.+.+.. .+|+.|+|+|++...+ |+ .+.+.+|+.|+|
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~---~~~~~~C~~C~G 75 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GP---FVMRSTCRRCGG 75 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TT---EEEEEECSSSSS
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CC---EEEEEECCcCCC
Confidence 35788999999999999999999999999999999999988764 7999999999876543 55 346789999999
Q ss_pred cceEEcCCCCCCccCCccEEEEcEEEEEEe
Q 015690 182 TGETINDKDRCPQCKGEKVIQEKKVLEVIV 211 (402)
Q Consensus 182 ~G~~~~~~~~C~~C~G~g~~~~~~~l~V~I 211 (402)
+|.++. ++|+.|+|.|++.+.++|+|+|
T Consensus 76 ~G~~i~--~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 76 RGSIII--SPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred cceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence 999985 9999999999999999988865
No 12
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.4e-21 Score=156.57 Aligned_cols=66 Identities=55% Similarity=0.914 Sum_probs=62.2
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CHHHHHHHHHHHHhhCCcccccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGG-DPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEG 67 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~-~~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~g 67 (402)
+||||+++||.+|||+|||+||++||||+++ ++++|++|++||+||+||.+|+.||++|+.++..+
T Consensus 12 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 12 DLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 6899999999999999999999999999997 46999999999999999999999999999888753
No 13
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=1.7e-21 Score=149.39 Aligned_cols=61 Identities=57% Similarity=0.869 Sum_probs=57.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHhhCCccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-PEKFKELAQAYEVLSDPEKREIYDQYGED 62 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~-~~kFk~i~~AYevLsd~~kR~~YD~~G~~ 62 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|++
T Consensus 12 ~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 12 DVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 68999999999999999999999999999986 59999999999999999999999999863
No 14
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=2.3e-21 Score=151.97 Aligned_cols=64 Identities=48% Similarity=0.807 Sum_probs=59.4
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-----HHHHHHHHHHHhhCCcccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDP-----EKFKELAQAYEVLSDPEKREIYDQYGEDALK 65 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~~-----~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~ 65 (402)
+||||+++||.+|||+|||+||++||||++++. ++|++|++||+||+||.+|+.||++|+.++.
T Consensus 13 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 13 EVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp HHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 699999999999999999999999999999852 6899999999999999999999999986543
No 15
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=3e-21 Score=150.28 Aligned_cols=62 Identities=52% Similarity=0.755 Sum_probs=58.3
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHhhCCcccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDA 63 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~ 63 (402)
+||||+++||.+|||+|||+|+++||||++++ .++|++|++||+||+||.+|+.||++|..+
T Consensus 11 ~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 11 QILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 68999999999999999999999999999974 389999999999999999999999998754
No 16
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=3.4e-21 Score=149.59 Aligned_cols=62 Identities=50% Similarity=0.808 Sum_probs=58.5
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHhhCCcccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDA 63 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~---~~kFk~i~~AYevLsd~~kR~~YD~~G~~~ 63 (402)
+||||+++||.+|||+|||+||++||||+++. .++|++|++||+||+||.+|+.||++|..+
T Consensus 11 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 11 EILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 68999999999999999999999999999975 389999999999999999999999999754
No 17
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=4.5e-21 Score=153.70 Aligned_cols=65 Identities=48% Similarity=0.746 Sum_probs=60.9
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHhhCCccccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 66 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~-----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~ 66 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++..
T Consensus 13 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 13 EVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp HHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 68999999999999999999999999999985 279999999999999999999999999887764
No 18
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=6.9e-21 Score=151.34 Aligned_cols=62 Identities=47% Similarity=0.762 Sum_probs=58.2
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHhhCCcccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDA 63 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~---~~kFk~i~~AYevLsd~~kR~~YD~~G~~~ 63 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||++|+.+
T Consensus 21 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 21 RVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 68999999999999999999999999999975 489999999999999999999999998753
No 19
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.81 E-value=5.9e-21 Score=154.96 Aligned_cols=65 Identities=55% Similarity=0.893 Sum_probs=58.3
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHhhCCccccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE 66 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~-----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~ 66 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|.+++.+
T Consensus 6 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 6 EILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp HHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 69999999999999999999999999999985 279999999999999999999999999887764
No 20
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.3e-20 Score=156.49 Aligned_cols=64 Identities=25% Similarity=0.477 Sum_probs=60.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHhhCCcccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALK 65 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~ 65 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.
T Consensus 24 ~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 24 TLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp HHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 68999999999999999999999999999984 48999999999999999999999999987654
No 21
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=1.9e-20 Score=154.72 Aligned_cols=64 Identities=50% Similarity=0.778 Sum_probs=60.3
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHhhCCcccccccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALK 65 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~ 65 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.
T Consensus 21 ~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 21 HVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 68999999999999999999999999999985 48999999999999999999999999987764
No 22
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=3e-20 Score=150.93 Aligned_cols=58 Identities=31% Similarity=0.515 Sum_probs=55.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHhhCCcccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQY 59 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----~~kFk~i~~AYevLsd~~kR~~YD~~ 59 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++
T Consensus 21 ~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 21 DLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 69999999999999999999999999999974 48999999999999999999999984
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.79 E-value=2.3e-20 Score=145.12 Aligned_cols=61 Identities=18% Similarity=0.331 Sum_probs=56.9
Q ss_pred cccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhhCCcccccccccccccc
Q 015690 2 RFSESRKN--ASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDA 63 (402)
Q Consensus 2 ~iLgv~~~--As~~eIkkAYrklA~k~HPDkn~~~~kFk~i~~AYevLsd~~kR~~YD~~G~~~ 63 (402)
+||||+++ ||.+|||+|||+||++||||+++++++|++|++||++|+|+.+|.. |.||..+
T Consensus 15 ~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 15 ELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 68999999 9999999999999999999999999999999999999999999988 5677654
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.78 E-value=2e-20 Score=155.38 Aligned_cols=60 Identities=32% Similarity=0.463 Sum_probs=58.0
Q ss_pred cccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhhCCcccccccccccc
Q 015690 2 RFSESRKNASQ--DDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 61 (402)
Q Consensus 2 ~iLgv~~~As~--~eIkkAYrklA~k~HPDkn~~~~kFk~i~~AYevLsd~~kR~~YD~~G~ 61 (402)
+||||+++|+. +|||+|||+||++||||+++++++|++|++||+||+||.+|+.||.||.
T Consensus 12 ~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 12 DLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred HHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 68999999999 9999999999999999999999999999999999999999999999875
No 25
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=1.3e-19 Score=165.90 Aligned_cols=82 Identities=35% Similarity=0.674 Sum_probs=67.7
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCCC
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDP 77 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~g~~~~~~~~d~ 77 (402)
+||||+++||.+|||+|||+||++||||+|++ .++|++|++||++|+||.+|+.||+||+.++....+ +....
T Consensus 6 ~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~---~~~~~ 82 (210)
T 3apq_A 6 SLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQG---GQYES 82 (210)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTCS---CCCCC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccccc---ccccc
Confidence 68999999999999999999999999999973 379999999999999999999999999988764321 22233
Q ss_pred ccccccccc
Q 015690 78 FDIFQSFFG 86 (402)
Q Consensus 78 ~diF~~~Fg 86 (402)
+.+|...|+
T Consensus 83 ~~~~~~~fg 91 (210)
T 3apq_A 83 WSYYRYDFG 91 (210)
T ss_dssp HHHHHHSSS
T ss_pred ccccccccc
Confidence 455555554
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.76 E-value=4.1e-20 Score=163.72 Aligned_cols=60 Identities=32% Similarity=0.458 Sum_probs=55.1
Q ss_pred cccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhhCCcccccccccccc
Q 015690 2 RFSESRKNAS--QDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 61 (402)
Q Consensus 2 ~iLgv~~~As--~~eIkkAYrklA~k~HPDkn~~~~kFk~i~~AYevLsd~~kR~~YD~~G~ 61 (402)
+||||+++|| .+|||+|||+||++||||+|+++++|++|++||+||+||.+|+.||+||.
T Consensus 15 ~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 15 DLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred HHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 6999999999 69999999999999999999999999999999999999999999999995
No 27
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.76 E-value=8.9e-20 Score=146.64 Aligned_cols=60 Identities=32% Similarity=0.513 Sum_probs=55.8
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHhhCCcccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----------PEKFKELAQAYEVLSDPEKREIYDQYGE 61 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----------~~kFk~i~~AYevLsd~~kR~~YD~~G~ 61 (402)
+||||+++||.+|||+|||+||++||||+++. .++|++|++||+||+||.+|+.||.+..
T Consensus 20 ~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 20 SILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp HHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 69999999999999999999999999999863 2799999999999999999999998753
No 28
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.75 E-value=2e-19 Score=148.64 Aligned_cols=60 Identities=38% Similarity=0.620 Sum_probs=57.0
Q ss_pred cccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHhhCCcccccccccccc
Q 015690 2 RFSESRKNA-SQDDLKKAYRKAAIKNHPDKGGD-------PEKFKELAQAYEVLSDPEKREIYDQYGE 61 (402)
Q Consensus 2 ~iLgv~~~A-s~~eIkkAYrklA~k~HPDkn~~-------~~kFk~i~~AYevLsd~~kR~~YD~~G~ 61 (402)
+||||+++| |.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||+++.
T Consensus 19 ~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 19 DVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp HHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 689999999 99999999999999999999986 3799999999999999999999999875
No 29
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.6e-18 Score=136.94 Aligned_cols=54 Identities=33% Similarity=0.409 Sum_probs=50.6
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHhhCCcccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD---PEKFKELAQAYEVLSDPEKREI 55 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~---~~kFk~i~~AYevLsd~~kR~~ 55 (402)
+||||+++||.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.
T Consensus 31 ~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 31 DMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 68999999999999999999999999999964 4899999999999999999864
No 30
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.71 E-value=4.7e-18 Score=129.36 Aligned_cols=53 Identities=26% Similarity=0.425 Sum_probs=50.2
Q ss_pred cccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhhCCccccc
Q 015690 2 RFSESRK-NASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKRE 54 (402)
Q Consensus 2 ~iLgv~~-~As~~eIkkAYrklA~k~HPDkn~~~~kFk~i~~AYevLsd~~kR~ 54 (402)
+||||++ +||.+|||+|||+||++||||+++++++|++|++||++|+|+..|+
T Consensus 18 ~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 18 QILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhcC
Confidence 6899999 7999999999999999999999999999999999999999987764
No 31
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=4.1e-18 Score=149.49 Aligned_cols=60 Identities=32% Similarity=0.497 Sum_probs=56.0
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH----------HHHHHHHHHHHhhCCcccccccccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDP----------EKFKELAQAYEVLSDPEKREIYDQYGE 61 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~~----------~kFk~i~~AYevLsd~~kR~~YD~~G~ 61 (402)
+||||+++||.++||+|||+||++||||++++. ++|++|++||+||+||.+|+.||.++.
T Consensus 14 ~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 14 SILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp HHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred HhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 689999999999999999999999999998742 799999999999999999999998764
No 32
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.69 E-value=5.5e-18 Score=134.18 Aligned_cols=54 Identities=26% Similarity=0.308 Sum_probs=50.0
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHhhCCcccccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREI 55 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~-----~~kFk~i~~AYevLsd~~kR~~ 55 (402)
+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+|...|..
T Consensus 20 ~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 20 SVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp HHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 68999999999999999999999999999986 3899999999999999888743
No 33
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.65 E-value=1.9e-17 Score=131.67 Aligned_cols=48 Identities=27% Similarity=0.379 Sum_probs=44.4
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHhhCC
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-------PEKFKELAQAYEVLSD 49 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~-------~~kFk~i~~AYevLsd 49 (402)
++|||+++||.+|||+||||||++||||||++ +++|++|++|||||.+
T Consensus 37 ~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 37 KPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999974 2589999999999974
No 34
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.62 E-value=9e-17 Score=142.94 Aligned_cols=59 Identities=19% Similarity=0.190 Sum_probs=54.9
Q ss_pred cccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCH---------HHHHHHHHHHHhhCCccccccccccc
Q 015690 2 RFSESRKNA--SQDDLKKAYRKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQYG 60 (402)
Q Consensus 2 ~iLgv~~~A--s~~eIkkAYrklA~k~HPDkn~~~---------~kFk~i~~AYevLsd~~kR~~YD~~G 60 (402)
+||||+++| |.++||+|||+||++||||++++. ++|+.|++||+||+||.+|+.||...
T Consensus 5 ~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 5 TLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 689999999 999999999999999999998741 58999999999999999999999864
No 35
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.61 E-value=8.6e-17 Score=131.74 Aligned_cols=50 Identities=20% Similarity=0.315 Sum_probs=45.0
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----------HHHHHHHHHHHHhhCCccc
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD-----------PEKFKELAQAYEVLSDPEK 52 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~-----------~~kFk~i~~AYevLsd~~k 52 (402)
+|||++. ||.+|||+||||||++||||||++ .++|++|++||+||||+..
T Consensus 45 ~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~ 105 (106)
T 3ag7_A 45 PVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP 105 (106)
T ss_dssp CCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence 5899986 999999999999999999999862 3789999999999999863
No 36
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.61 E-value=1.5e-16 Score=142.04 Aligned_cols=58 Identities=21% Similarity=0.278 Sum_probs=54.0
Q ss_pred cccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCH---------HHHHHHHHHHHhhCCcccccccccc
Q 015690 2 RFSESRKNAS--QDDLKKAYRKAAIKNHPDKGGDP---------EKFKELAQAYEVLSDPEKREIYDQY 59 (402)
Q Consensus 2 ~iLgv~~~As--~~eIkkAYrklA~k~HPDkn~~~---------~kFk~i~~AYevLsd~~kR~~YD~~ 59 (402)
+||||+++|| .++||+|||+||++||||++++. ++|+.|++||+||+||.+|+.||..
T Consensus 8 ~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 8 ELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp HHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 6899999998 99999999999999999998741 6899999999999999999999974
No 37
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.59 E-value=1.9e-16 Score=144.80 Aligned_cols=57 Identities=19% Similarity=0.307 Sum_probs=52.5
Q ss_pred cccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCC---------HHHHHHHHHHHHhhCCccccccccc
Q 015690 2 RFSESRKN--ASQDDLKKAYRKAAIKNHPDKGGD---------PEKFKELAQAYEVLSDPEKREIYDQ 58 (402)
Q Consensus 2 ~iLgv~~~--As~~eIkkAYrklA~k~HPDkn~~---------~~kFk~i~~AYevLsd~~kR~~YD~ 58 (402)
+||||+++ ||.++||+|||+||++||||++++ .++|++|++||+||+||.+|+.||.
T Consensus 47 ~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 47 SLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp HHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 68999987 799999999999999999999874 1579999999999999999999995
No 38
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.59 E-value=9.8e-17 Score=173.92 Aligned_cols=82 Identities=35% Similarity=0.674 Sum_probs=42.4
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHhhCCccccccccccccccccccCCCCCCCCCC
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGAHDP 77 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~----~~kFk~i~~AYevLsd~~kR~~YD~~G~~~~~~g~~~~~~~~d~ 77 (402)
+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+||.+|+.||+||++++..+.++ ....
T Consensus 25 ~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~~~---~~~~ 101 (780)
T 3apo_A 25 SLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQGG---QYES 101 (780)
T ss_dssp HHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------------------
T ss_pred HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCCCC---Cccc
Confidence 68999999999999999999999999999963 3799999999999999999999999999888754321 1233
Q ss_pred ccccccccc
Q 015690 78 FDIFQSFFG 86 (402)
Q Consensus 78 ~diF~~~Fg 86 (402)
+++|...||
T Consensus 102 ~~~~~~~fg 110 (780)
T 3apo_A 102 WSYYRYDFG 110 (780)
T ss_dssp --CCSSSSS
T ss_pred ccccchhhc
Confidence 455555554
No 39
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.57 E-value=4.8e-16 Score=139.29 Aligned_cols=59 Identities=31% Similarity=0.427 Sum_probs=53.6
Q ss_pred ccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCC-CHHHHHHHHHHHHhhCCccccccccccc
Q 015690 2 RFS------ESRK-NASQDDLKKAYRKAAIKNHPDKGG-DPEKFKELAQAYEVLSDPEKREIYDQYG 60 (402)
Q Consensus 2 ~iL------gv~~-~As~~eIkkAYrklA~k~HPDkn~-~~~kFk~i~~AYevLsd~~kR~~YD~~G 60 (402)
+|| |+++ +||.++||+|||+||++||||+++ ..++|++|++||+||+||.+|+.||...
T Consensus 15 ~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 15 ELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp GGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 688 4654 999999999999999999999998 4689999999999999999999999843
No 40
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.50 E-value=4e-14 Score=109.75 Aligned_cols=77 Identities=31% Similarity=0.785 Sum_probs=65.6
Q ss_pred cccceecceeeeecCCccCCCcccCce-eeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcceEEcCCCCCCccCCc
Q 015690 120 GTSKKLSLSRNVICTKCKGKGSKSGAS-MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGE 198 (402)
Q Consensus 120 G~~~~~~~~r~~~C~~C~G~G~~~~~~-~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~ 198 (402)
|.+++|.+.+.+.|+.|+|+|...... .+|+.|+|+|.++..+ | ++ +++.+|+.|+|+|.++. ++|+.|+|.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~--g--~~-~~~~~C~~C~G~G~~~~--~~C~~C~G~ 73 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ--G--FF-AVQQTCPHCQGRGTLIK--DPCNKCHGH 73 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE--T--TE-EEEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc--C--CC-EEeeECcCCCCccEECC--CcCCCCCCe
Confidence 677889999999999999999876654 7999999999876533 4 44 47789999999999875 899999999
Q ss_pred cEEEE
Q 015690 199 KVIQE 203 (402)
Q Consensus 199 g~~~~ 203 (402)
+++.+
T Consensus 74 G~~~~ 78 (79)
T 1exk_A 74 GRVER 78 (79)
T ss_dssp SEEEC
T ss_pred EEEee
Confidence 99864
No 41
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.34 E-value=1.6e-12 Score=122.30 Aligned_cols=129 Identities=22% Similarity=0.375 Sum_probs=81.3
Q ss_pred cccccccceecceeeeecCCccCCCcccC----------ceeeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcceE
Q 015690 116 DLYNGTSKKLSLSRNVICTKCKGKGSKSG----------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGET 185 (402)
Q Consensus 116 e~~~G~~~~~~~~r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~ 185 (402)
..|.|...+- -+ ...|+.|+|+|.... ...+|+.|+|+|.++ ....+|+.|+|+|.+
T Consensus 42 ~~C~G~G~~~-g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i-----------~~~~~C~~C~G~g~~ 108 (248)
T 1nlt_A 42 KECEGRGGKK-GA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDII-----------DPKDRCKSCNGKKVE 108 (248)
T ss_dssp TTTTTCSBST-TT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCC-----------CTTSBCSSSTTSCEE
T ss_pred CCCcCccCCC-CC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEe-----------ccCCCCcccCCCceE
Confidence 4567776552 23 378999999997421 236899999999421 126889999999876
Q ss_pred EcCC----------------------CCCC-ccCCccEEEE-------------------------------------cE
Q 015690 186 INDK----------------------DRCP-QCKGEKVIQE-------------------------------------KK 205 (402)
Q Consensus 186 ~~~~----------------------~~C~-~C~G~g~~~~-------------------------------------~~ 205 (402)
...+ +.=+ .-.|.=++.. ..
T Consensus 109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG 188 (248)
T 1nlt_A 109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188 (248)
T ss_dssp EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence 3200 0000 0011111111 22
Q ss_pred -EEEEEecCC--CcCCCEEecCCCcCCCC-CCCCccEEEEEEEecCCC--ccccCCce
Q 015690 206 -VLEVIVEKG--MQNGQKITFPGEADEAP-DTVTGDIVFVLQQKEHPK--FKRKGDDL 257 (402)
Q Consensus 206 -~l~V~Ip~G--~~~G~~i~~~geG~~~~-g~~~GDliv~i~v~~h~~--f~R~g~dL 257 (402)
.++|+||+| +++|++++|+|+|.+.. +...|||||+|+|.-+.. ++.+...|
T Consensus 189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-----------
T ss_pred CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 689999999 99999999999999853 226799999999997766 66555444
No 42
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.07 E-value=6.9e-11 Score=87.59 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=45.5
Q ss_pred cccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhhCC
Q 015690 2 RFSESRKN---ASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSD 49 (402)
Q Consensus 2 ~iLgv~~~---As~~eIkkAYrklA~k~HPDkn~~~~kFk~i~~AYevLsd 49 (402)
.||||+++ ||.++|++|||+|...+|||+++++..+.+|++|+++|..
T Consensus 8 ~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 8 KILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 58999999 9999999999999999999999999999999999999953
No 43
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.81 E-value=1.9e-09 Score=88.45 Aligned_cols=51 Identities=25% Similarity=0.371 Sum_probs=43.4
Q ss_pred EEEEecCCCcCCCEEecCCCcCCCCCCCCccEEEEEEEecCCCccccCCcee
Q 015690 207 LEVIVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLF 258 (402)
Q Consensus 207 l~V~Ip~G~~~G~~i~~~geG~~~~g~~~GDliv~i~v~~h~~f~R~g~dL~ 258 (402)
++|.||+|+++|++++++|+|++.++ ..|||||+|+|.-+..++.+..+|+
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l 90 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELW 90 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHH
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHH
Confidence 67999999999999999999998754 7899999999998877766554444
No 44
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.62 E-value=1.6e-08 Score=84.44 Aligned_cols=53 Identities=15% Similarity=0.200 Sum_probs=40.9
Q ss_pred EEEEEecCC--CcCCCEEecCCCcCCCCC-CCCccEEEEEEEecCCC--ccccCCcee
Q 015690 206 VLEVIVEKG--MQNGQKITFPGEADEAPD-TVTGDIVFVLQQKEHPK--FKRKGDDLF 258 (402)
Q Consensus 206 ~l~V~Ip~G--~~~G~~i~~~geG~~~~g-~~~GDliv~i~v~~h~~--f~R~g~dL~ 258 (402)
.+.|+||+| +++|++++++|+|.+..+ ...|||||+++|..+.. ++.+..+|+
T Consensus 35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l 92 (121)
T 1xao_A 35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKL 92 (121)
T ss_dssp EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHH
T ss_pred EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHH
Confidence 478999999 999999999999998543 26799999999998776 665554443
No 45
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=98.62 E-value=1.1e-08 Score=90.91 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=30.5
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGD 33 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~ 33 (402)
+||||+++||.+|||+|||+||++||||++++
T Consensus 121 ~vLgv~~~As~~eIKkAYRklal~~HPDK~~~ 152 (182)
T 1n4c_A 121 KPVGMADLVTPEQVKKVYRKAVLVVHPDKATG 152 (182)
T ss_dssp CCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSS
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCC
Confidence 69999999999999999999999999999864
No 46
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.53 E-value=1.6e-07 Score=83.09 Aligned_cols=73 Identities=18% Similarity=0.136 Sum_probs=60.4
Q ss_pred CceeeeeccCHHHHhcCCEEEEecc----CC----cEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEEEEEe
Q 015690 255 DDLFVEHTLSLTEALCGFQFVITHL----DG----RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVD 326 (402)
Q Consensus 255 ~dL~~~~~I~l~eAl~G~~~~i~tl----dG----~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~V~ 326 (402)
.|+.+++.|||.||+.|+++.|..- +| +.+.|+|||| +..|+.++++|+|-+.. ..+..|||||.++|.
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~~~-~gg~~GDl~v~i~v~ 77 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNP-QTGRRKTLQFVIQEK 77 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCS-SSSCBCEEEEEEEEC
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCC--ccCCCEEEEeccccCCC-CCCccccEEEEEEEc
Confidence 3789999999999999999887643 23 7899999999 89999999999998643 234689999999997
Q ss_pred CCCC
Q 015690 327 FPES 330 (402)
Q Consensus 327 ~P~~ 330 (402)
-.+.
T Consensus 78 ~h~~ 81 (170)
T 1c3g_A 78 SHPN 81 (170)
T ss_dssp CCSS
T ss_pred cCCc
Confidence 5444
No 47
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.51 E-value=1.9e-07 Score=83.33 Aligned_cols=75 Identities=16% Similarity=0.093 Sum_probs=61.0
Q ss_pred CCceeeeeccCHHHHhcCCEEEEecc-----------CCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEE
Q 015690 254 GDDLFVEHTLSLTEALCGFQFVITHL-----------DGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIH 322 (402)
Q Consensus 254 g~dL~~~~~I~l~eAl~G~~~~i~tl-----------dG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~ 322 (402)
+.|+.+++.|||.||+.|+++.|..- ..+.|.|+|||| +..|+.++++|+|-+.. ..+..|||||.
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~g~-~gg~~GDl~v~ 79 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPG--WKDGTKLTYSGEGDQES-PGTSPGDLVLI 79 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTT--CCTTCEEEETTCSCCSS-TTSCCCEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCC--CcCCcEEEEeeccCCCC-CCCccccEEEE
Confidence 67999999999999999998777642 247799999999 89999999999998732 13468999999
Q ss_pred EEEeCCCCC
Q 015690 323 FTVDFPESL 331 (402)
Q Consensus 323 ~~V~~P~~l 331 (402)
++|.-.+.+
T Consensus 80 i~~~~h~~F 88 (180)
T 2q2g_A 80 IQTKTHPRF 88 (180)
T ss_dssp EEECCCSSC
T ss_pred EEEEecccE
Confidence 999744443
No 48
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.44 E-value=4.6e-07 Score=80.88 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=58.8
Q ss_pred CCceeeeeccCHHHHhcCCEEEEecc------CC-------cEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEE
Q 015690 254 GDDLFVEHTLSLTEALCGFQFVITHL------DG-------RQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLY 320 (402)
Q Consensus 254 g~dL~~~~~I~l~eAl~G~~~~i~tl------dG-------~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~ 320 (402)
+.|+.+++.|||.||+.|.++.|..- .| +.+.|+|||| +..|+.++++|+|-+... +..||||
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G--~~~G~~ir~~G~G~~~~~--g~~GDl~ 77 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKG--WKEGTKITFPKEGDQTSN--NIPADIV 77 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTT--CCTTCEEEETTCSCCCSS--SCCCCEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCC--ccCCcEEEEeeccccCCC--CCcccEE
Confidence 56899999999999999998776532 34 6789999999 899999999999998652 4689999
Q ss_pred EEEEEeCCCCCC
Q 015690 321 IHFTVDFPESLS 332 (402)
Q Consensus 321 i~~~V~~P~~l~ 332 (402)
|.++|.-.+.+.
T Consensus 78 v~i~~~~h~~F~ 89 (181)
T 3agx_A 78 FVLKDKPHNIFK 89 (181)
T ss_dssp EEEEECCCSSCE
T ss_pred EEEEEeccccce
Confidence 999997544443
No 49
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.43 E-value=2e-07 Score=90.82 Aligned_cols=76 Identities=22% Similarity=0.211 Sum_probs=59.0
Q ss_pred ccCCceeeeeccCHHHHhcCCEEEEecc------C-------CcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCc
Q 015690 252 RKGDDLFVEHTLSLTEALCGFQFVITHL------D-------GRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGK 318 (402)
Q Consensus 252 R~g~dL~~~~~I~l~eAl~G~~~~i~tl------d-------G~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~Gd 318 (402)
++|.||.+++.|+|.||+.|.+..|..- . .+.|.|+|||| +++|++++++|+|.|... .+..||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~G--v~~G~~Irl~G~G~~g~~-gg~~GD 214 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG--VVDGQRIRLKGQGTPGEN-GGPNGD 214 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTT--CCTTCEEEESSCSCCC----CCCCC
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCC--CCCCCEEEEcccccCCCC-CCCCCc
Confidence 5688999999999999999987655432 2 34688999999 799999999999998642 345899
Q ss_pred EEEEEEEeCCCC
Q 015690 319 LYIHFTVDFPES 330 (402)
Q Consensus 319 L~i~~~V~~P~~ 330 (402)
|||.++|.-.+.
T Consensus 215 L~v~I~v~~h~~ 226 (329)
T 3lz8_A 215 LWLVIHIAPHPL 226 (329)
T ss_dssp EEEEECCCCCSS
T ss_pred EEEEEEEecCCc
Confidence 999998864443
No 50
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.04 E-value=3.7e-06 Score=68.05 Aligned_cols=58 Identities=26% Similarity=0.629 Sum_probs=43.4
Q ss_pred cccccccceecceeeeecCCccCCCcccC------ceeeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcceEEc
Q 015690 116 DLYNGTSKKLSLSRNVICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETIN 187 (402)
Q Consensus 116 e~~~G~~~~~~~~r~~~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 187 (402)
+.|.|...+ .-.....|+.|+|+|.... ...+|+.|+|+|. .+..+|+.|+|+|.+..
T Consensus 32 ~~C~G~G~~-~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~-------------~i~~~C~~C~G~G~v~~ 95 (104)
T 2ctt_A 32 ERCNGKGNE-PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGS-------------IIISPCVVCRGAGQAKQ 95 (104)
T ss_dssp SSSSSSSSC-TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSE-------------ECSSCCSSSSSCSEECC
T ss_pred CCCcCCccC-CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcce-------------ECCCcCCCCCCeeEEEE
Confidence 456676654 3445678999999996531 2368999999994 34689999999999864
No 51
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=98.03 E-value=3.1e-06 Score=64.87 Aligned_cols=57 Identities=32% Similarity=0.770 Sum_probs=42.9
Q ss_pred cccccccceecceeeeecCCccCCCcccCc------eeeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcceEE
Q 015690 116 DLYNGTSKKLSLSRNVICTKCKGKGSKSGA------SMKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 186 (402)
Q Consensus 116 e~~~G~~~~~~~~r~~~C~~C~G~G~~~~~------~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 186 (402)
..++|.... .......|+.|+|+|..... ..+|+.|+|+|.+ +..+|+.|+|.|.+.
T Consensus 15 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-------------~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 15 DVCHGSGAK-PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL-------------IKDPCNKCHGHGRVE 77 (79)
T ss_dssp GGGTTTSBC-SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE-------------CSSBCGGGTTSSEEE
T ss_pred CCCcccccC-CCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE-------------CCCcCCCCCCeEEEe
Confidence 556777654 34445789999999976421 2589999999942 357999999999875
No 52
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.75 E-value=4.9e-06 Score=58.76 Aligned_cols=33 Identities=30% Similarity=0.859 Sum_probs=27.0
Q ss_pred eEeeeeCCCCCCcceEEcCCCCCCccCCccEEEEc
Q 015690 170 QQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEK 204 (402)
Q Consensus 170 ~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~ 204 (402)
++++.+|+.|+|+|.++. ++|+.|+|.|++.+.
T Consensus 6 qq~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 6 DDLETTCPNCNGSGREEP--EPCPKCLGKGVILTA 38 (53)
T ss_dssp HHHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred CceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence 456788999999998876 889999999887764
No 53
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.47 E-value=1.7e-06 Score=91.03 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=56.8
Q ss_pred eeccccccccccccccceecceeeeecCCccCCCcccCc----eeeCCCCcCCceEEE--------EEecCCceeeEeee
Q 015690 107 IHPLKVSLEDLYNGTSKKLSLSRNVICTKCKGKGSKSGA----SMKCSGCQGSGMKVS--------IRHLGPSMIQQMQH 174 (402)
Q Consensus 107 ~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~----~~~C~~C~G~G~~~~--------~~~~gpg~~~~~~~ 174 (402)
.+.+.++|+|+..|..+++.+.+...|..|+|+|.+.+. ..+|+.|+|+..... ...+-.|++-+...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 467899999999999999999999999999999998875 478999999941100 00000011112346
Q ss_pred eCCCCCCcce
Q 015690 175 PCNECKGTGE 184 (402)
Q Consensus 175 ~C~~C~G~G~ 184 (402)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 7888888764
No 54
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=97.00 E-value=0.0004 Score=48.90 Aligned_cols=26 Identities=38% Similarity=0.972 Sum_probs=13.8
Q ss_pred eecCCccCCCcccCceeeCCCCcCCceE
Q 015690 131 VICTKCKGKGSKSGASMKCSGCQGSGMK 158 (402)
Q Consensus 131 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~ 158 (402)
+.|+.|+|+|.... .+|+.|+|+|.+
T Consensus 10 ~~C~~C~GsG~~~~--~~C~~C~G~G~v 35 (53)
T 2bx9_A 10 VACPKCERAGEIEG--TPCPACSGKGVI 35 (53)
T ss_dssp EECTTTTTSSEETT--EECTTTTTSSEE
T ss_pred ccCCCCcceeccCC--CCCccCCCCccE
Confidence 45666666665432 345555555543
No 55
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.00 E-value=0.0004 Score=48.88 Aligned_cols=25 Identities=32% Similarity=0.933 Sum_probs=13.6
Q ss_pred eecCCccCCCcccCceeeCCCCcCCce
Q 015690 131 VICTKCKGKGSKSGASMKCSGCQGSGM 157 (402)
Q Consensus 131 ~~C~~C~G~G~~~~~~~~C~~C~G~G~ 157 (402)
..|+.|+|+|.... .+|+.|+|+|.
T Consensus 10 ~~C~~C~GsG~~i~--~~C~~C~G~G~ 34 (53)
T 3lcz_A 10 TTCPNCNGSGREEP--EPCPKCLGKGV 34 (53)
T ss_dssp EECTTTTTSCEETT--EECTTTTTSSE
T ss_pred ccCcCCcccccCCC--CcCCCCCCcEE
Confidence 45666666665432 44555555554
No 56
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.65 E-value=0.00071 Score=47.60 Aligned_cols=27 Identities=30% Similarity=0.838 Sum_probs=17.1
Q ss_pred eeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcceEE
Q 015690 147 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 186 (402)
Q Consensus 147 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 186 (402)
.+|+.|+|+|.+ ...+|+.|+|+|.++
T Consensus 10 ~~C~~C~GsG~~-------------~~~~C~~C~G~G~v~ 36 (53)
T 2bx9_A 10 VACPKCERAGEI-------------EGTPCPACSGKGVIL 36 (53)
T ss_dssp EECTTTTTSSEE-------------TTEECTTTTTSSEEE
T ss_pred ccCCCCcceecc-------------CCCCCccCCCCccEE
Confidence 467777777732 235677777777654
No 57
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=95.68 E-value=0.0066 Score=59.18 Aligned_cols=33 Identities=33% Similarity=0.557 Sum_probs=30.6
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH
Q 015690 2 RFSESRKNASQDDLKKAYRKAAIKNHPDKGGDP 34 (402)
Q Consensus 2 ~iLgv~~~As~~eIkkAYrklA~k~HPDkn~~~ 34 (402)
.+||+.+.++.++|+++||++|+++|||+.+++
T Consensus 386 ~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~ 418 (450)
T 2y4t_A 386 KILGVKRNAKKQEIIKAYRKLALQWHPDNFQNE 418 (450)
T ss_dssp GGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSH
T ss_pred HHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCc
Confidence 579999999999999999999999999999863
No 58
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=56.80 E-value=35 Score=31.27 Aligned_cols=14 Identities=7% Similarity=0.131 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHhC
Q 015690 14 DLKKAYRKAAIKNH 27 (402)
Q Consensus 14 eIkkAYrklA~k~H 27 (402)
||+++|+..-..|.
T Consensus 9 ~~~~~f~~Fl~~f~ 22 (268)
T 2vl6_A 9 DYRDVFIEFLTTFK 22 (268)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhh
Confidence 67888888777664
No 59
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=53.57 E-value=53 Score=30.24 Aligned_cols=15 Identities=0% Similarity=0.047 Sum_probs=9.4
Q ss_pred CCCHHHHHHHHHHHH
Q 015690 9 NASQDDLKKAYRKAA 23 (402)
Q Consensus 9 ~As~~eIkkAYrklA 23 (402)
.|...||++.|+..-
T Consensus 8 ~~~~~~~~~~f~~Fl 22 (279)
T 1ltl_A 8 TVDKSKTLTKFEEFF 22 (279)
T ss_dssp -CCHHHHHHHHHHHT
T ss_pred cCChHHHHHHHHHHh
Confidence 467778887765543
No 60
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=48.02 E-value=28 Score=29.10 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=34.8
Q ss_pred hcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEEE
Q 015690 269 LCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIH 322 (402)
Q Consensus 269 l~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i~ 322 (402)
|-|+++. ...||+.+..++|++.+++||..++|-.+|.-...++ ..||+-+
T Consensus 52 LgGW~L~-r~v~g~~~~y~FP~~~~L~pg~~VtVwa~g~g~~~~p--p~dlv~~ 102 (144)
T 3jt0_A 52 MGGWEMI-RKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTASP--PTDLIWK 102 (144)
T ss_dssp CTTCEEE-EEETTEEEEEECCTTCEECTTCEEEEEETTSCCCCBT--TTEEEET
T ss_pred cCCcEEE-EEeCCCceEEEcCCCcEECCCCEEEEEECCCCCCCCC--Chhheec
Confidence 4455554 4467776778999999999999999987776322222 3566543
No 61
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=41.49 E-value=3.9 Score=42.96 Aligned_cols=47 Identities=13% Similarity=0.363 Sum_probs=30.9
Q ss_pred eeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcceEE-------------------cCCCCCCccCCccE
Q 015690 147 MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI-------------------NDKDRCPQCKGEKV 200 (402)
Q Consensus 147 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~-------------------~~~~~C~~C~G~g~ 200 (402)
.+|..|+|+|. -+|--.....+|+.|+|+.... .....|..|+....
T Consensus 192 ~~C~tCHGsGA-------~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~~C~~CH~~~~ 257 (669)
T 3pmq_A 192 DTCNSCHSNLA-------FHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSISNCQTCHADNP 257 (669)
T ss_dssp HHHHHHHSSCC-------TTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTTCCTTTSCCCT
T ss_pred CcCCCCCCCCC-------cCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccCcchhhcCCcc
Confidence 67999999994 2222112347899999993111 12467999998753
No 62
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=36.74 E-value=26 Score=25.56 Aligned_cols=53 Identities=17% Similarity=0.348 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCHHHH-HHHH--HHHHhhCC-ccccccccccc
Q 015690 8 KNASQDDLKKAYRKAAIKNHPDKGGDPEKF-KELA--QAYEVLSD-PEKREIYDQYG 60 (402)
Q Consensus 8 ~~As~~eIkkAYrklA~k~HPDkn~~~~kF-k~i~--~AYevLsd-~~kR~~YD~~G 60 (402)
.-+|.+|.+.||++|-..++-+-.-.=+++ +.|. .-|.+|.+ .+++++|+.|-
T Consensus 10 ~~~t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey~ 66 (71)
T 1uzc_A 10 TWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYK 66 (71)
T ss_dssp CCCSHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCccccccCCHHHHHHHHHHHH
Confidence 357999999999999988753322221222 2232 35677766 35666776663
No 63
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=35.67 E-value=60 Score=26.20 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=29.1
Q ss_pred hcCCEEEEeccCCcEEEEEeCCCccccCCceEEecCCCCC
Q 015690 269 LCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMP 308 (402)
Q Consensus 269 l~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp 308 (402)
|-|+++. ...||.....++|++.+++||..+.|-.+|.-
T Consensus 39 L~gW~l~-r~v~~~~~~y~Fp~~~~L~pg~~vtVwa~g~g 77 (123)
T 3hn9_A 39 MGGWEMI-RKIGDTSVSYKYTSRYVLKAGQTVTIWAANAG 77 (123)
T ss_dssp CTTCEEE-EEETTEEEEEECCTTCEECTTCEEEEEETTSS
T ss_pred cCCcEEE-EEeCCCceEEEcCCCcEECCCCEEEEEECCCC
Confidence 4555554 33567655689999999999999999887763
No 64
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=35.46 E-value=5 Score=41.06 Aligned_cols=66 Identities=21% Similarity=0.480 Sum_probs=35.5
Q ss_pred ecCCccCCCcccCc-----eeeCCCCcCCceEEEEE--ecCCceeeEeeeeCCCCCCcceEEcCCCCCCccCCcc
Q 015690 132 ICTKCKGKGSKSGA-----SMKCSGCQGSGMKVSIR--HLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEK 199 (402)
Q Consensus 132 ~C~~C~G~G~~~~~-----~~~C~~C~G~G~~~~~~--~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g 199 (402)
.|..||+.+..... ...|-.|++.-..+... ...|-....-...|..||-.-.. ....|..||...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~--~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEE--PKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSC--CCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcC--cCchhhhhcCCC
Confidence 69999988653211 14699999752211000 00000000014679999865542 347899998764
No 65
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=35.46 E-value=7.6 Score=39.56 Aligned_cols=26 Identities=35% Similarity=0.691 Sum_probs=17.7
Q ss_pred EEecCCceeeEeeeeCCCCCCcceEE
Q 015690 161 IRHLGPSMIQQMQHPCNECKGTGETI 186 (402)
Q Consensus 161 ~~~~gpg~~~~~~~~C~~C~G~G~~~ 186 (402)
.++.++.+......+|+.|+|+|.+.
T Consensus 396 RkR~r~sL~e~~~~~Cp~C~G~G~v~ 421 (517)
T 2bx2_L 396 RQRLSPSLGESSHHVCPRCSGTGTVR 421 (517)
T ss_dssp ECCCSCCHHHHHCCCCSSSSSSSCCC
T ss_pred ecCcCcChhhhhcCcCCCcCCceeEC
Confidence 33455656556677888888888764
No 66
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=32.30 E-value=14 Score=30.03 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=15.1
Q ss_pred HHHHHHHHHhhCCccccccccc
Q 015690 37 FKELAQAYEVLSDPEKREIYDQ 58 (402)
Q Consensus 37 Fk~i~~AYevLsd~~kR~~YD~ 58 (402)
+.++=.+||.+++.+++..+|.
T Consensus 90 Y~k~L~~YE~~~~~e~~~l~~~ 111 (121)
T 2rq5_A 90 YCQYLLSYDSLSPEEHRRLEKE 111 (121)
T ss_dssp HHTTHHHHHHCCHHHHHHHHHH
T ss_pred HHHHhHHHHCcCHHHHhhHHHH
Confidence 3344557888888888777664
No 67
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=31.00 E-value=34 Score=33.63 Aligned_cols=67 Identities=19% Similarity=0.285 Sum_probs=0.0
Q ss_pred eeCCCCcCCceEEEEEecCC--ceeeEeeeeCCCCCCc-------------ceEEcCCCCCCccCCccEEEEcE------
Q 015690 147 MKCSGCQGSGMKVSIRHLGP--SMIQQMQHPCNECKGT-------------GETINDKDRCPQCKGEKVIQEKK------ 205 (402)
Q Consensus 147 ~~C~~C~G~G~~~~~~~~gp--g~~~~~~~~C~~C~G~-------------G~~~~~~~~C~~C~G~g~~~~~~------ 205 (402)
..|+.|+..|........=| +-|-.+...|+.|+=+ |..+. ...+..
T Consensus 13 s~Cp~C~~~g~t~~~~~~IP~F~eVii~Sf~C~~CGyrn~ev~~~g~~~pkG~r~t------------L~V~~~~DLnr~ 80 (404)
T 2qkd_A 13 SLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWNNTEIQSAGRIQDQGVRYT------------LTVRSQEDMNRE 80 (404)
T ss_dssp EECTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCEEEEEEEEESSCSSEEEEE------------EEECSHHHHTCE
T ss_pred ccCCCCCCCceEEEEEEcCCCCceEEEEEEECCCCCCchheeeECcccCCCcEEEE------------EEECChhcccce
Q ss_pred ------------EEEEEecCCCcCCCEEecCC
Q 015690 206 ------------VLEVIVEKGMQNGQKITFPG 225 (402)
Q Consensus 206 ------------~l~V~Ip~G~~~G~~i~~~g 225 (402)
.|.+.||||...|..-++.|
T Consensus 81 VvKS~tati~IPEL~~eI~pg~~~G~iTTVEG 112 (404)
T 2qkd_A 81 VVKTDSATTRIPELDFEIPAFSQKGALTTVEG 112 (404)
T ss_dssp EEECTTCEEEEGGGTEEECTTSSCCEEEEHHH
T ss_pred EEEcCCcEEEeeeeeEEecCccCCceEEeHHH
No 68
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=30.46 E-value=68 Score=26.52 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=33.1
Q ss_pred hcCCEEEEeccCCc-EEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEE
Q 015690 269 LCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 321 (402)
Q Consensus 269 l~G~~~~i~tldG~-~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i 321 (402)
|-|+++. ...||+ .+..++|++.+++||..++|-..|.-....+ -.||+-
T Consensus 48 L~GW~L~-r~v~g~~~~~y~Fp~~~~L~pg~~VtIws~~~g~~~~p--p~dlv~ 98 (139)
T 2lll_A 48 LGNWRIK-RQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHSP--PSTLVW 98 (139)
T ss_dssp CSSCEEE-EEETTSCEEEEECCTTCEECTTCEEEEEEGGGTCCCBT--TTEEEE
T ss_pred cCCCEEE-EecCCCccEEEEECCCcEECCCCEEEEEeCCCCCCCCC--chhEEE
Confidence 4455544 344554 4778999999999999999998776332222 356654
No 69
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=29.39 E-value=83 Score=25.29 Aligned_cols=51 Identities=18% Similarity=0.155 Sum_probs=33.6
Q ss_pred HhcCCEEEEeccCCc-EEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEE
Q 015690 268 ALCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 321 (402)
Q Consensus 268 Al~G~~~~i~tldG~-~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i 321 (402)
.|-|+++.= ..||+ .+..++|++.+++||+.++|-..|.-....+ -.||+-
T Consensus 32 ~L~gW~l~r-~v~~~~~~~y~Fp~~~~L~pg~~vtIws~~~g~~~~p--p~dlv~ 83 (121)
T 1ifr_A 32 SMGNWQIKR-QNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHSP--PTDLVW 83 (121)
T ss_dssp ECTTCEEEE-EETTSCCEEEECCSSCEECTTCEEEEEETTSSCCCBT--TTEEEE
T ss_pred ccCCCEEEE-EcCCCccEEEEeCCCcEECCCCEEEEEeCCCCCCCCC--chhEEE
Confidence 345555443 34554 3678999999999999999998876432222 356654
No 70
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=29.32 E-value=1.1e+02 Score=22.90 Aligned_cols=24 Identities=21% Similarity=0.703 Sum_probs=13.2
Q ss_pred eecCCccCCCcccCceeeCCCCcC
Q 015690 131 VICTKCKGKGSKSGASMKCSGCQG 154 (402)
Q Consensus 131 ~~C~~C~G~G~~~~~~~~C~~C~G 154 (402)
..||.|+..=...+....|..|..
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~ 26 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAK 26 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCC
T ss_pred CCCCCCCCccccCCCceECccccc
Confidence 467777654222223345777764
No 71
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=29.14 E-value=6.7 Score=40.11 Aligned_cols=65 Identities=18% Similarity=0.469 Sum_probs=34.7
Q ss_pred ecCCccCCCcccC------ceeeCCCCcCCceEEEEE----ecCCceeeE-eeeeCCCCCCcceEEcCCCCCCccCCc
Q 015690 132 ICTKCKGKGSKSG------ASMKCSGCQGSGMKVSIR----HLGPSMIQQ-MQHPCNECKGTGETINDKDRCPQCKGE 198 (402)
Q Consensus 132 ~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~----~~gpg~~~~-~~~~C~~C~G~G~~~~~~~~C~~C~G~ 198 (402)
.|..||+...... ....|..|+.....+... ...|-.... -...|..|+..=.. ....|..||-.
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~--~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEK--SMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSC--BCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccC--CCccccccChh
Confidence 6999998764321 125699999753110000 000000000 14579999876332 34789999875
No 72
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=28.93 E-value=44 Score=24.79 Aligned_cols=25 Identities=28% Similarity=0.631 Sum_probs=17.2
Q ss_pred HhcCCEEEEeccCCcEEEEEeCCCc
Q 015690 268 ALCGFQFVITHLDGRQLLIKSQPGE 292 (402)
Q Consensus 268 Al~G~~~~i~tldG~~l~v~i~~g~ 292 (402)
-|.|..+.|.+++|+.+.+.+++..
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~~~ 30 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEPSD 30 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCTTS
T ss_pred cccceEEEEEeCCCCEEEEEECCCC
Confidence 3678888899999888888877654
No 73
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=28.77 E-value=30 Score=24.33 Aligned_cols=48 Identities=23% Similarity=0.384 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCC-HHHHHHH-H--HHHHhhCC-cc-ccccccccc
Q 015690 13 DDLKKAYRKAAIKNHPDKGGD-PEKFKEL-A--QAYEVLSD-PE-KREIYDQYG 60 (402)
Q Consensus 13 ~eIkkAYrklA~k~HPDkn~~-~~kFk~i-~--~AYevLsd-~~-kR~~YD~~G 60 (402)
+|..+||.+|-+...=|-+=+ +.-.+.| . --|-+|.| |. +++.|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcHHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 577899999988764333222 3566777 3 48999997 65 667888773
No 74
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=27.40 E-value=24 Score=38.12 Aligned_cols=33 Identities=33% Similarity=0.707 Sum_probs=21.6
Q ss_pred eCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcce
Q 015690 148 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 184 (402)
Q Consensus 148 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 184 (402)
.|+.|.|.|.+....+..| .+..+|+.|+|+..
T Consensus 640 ~c~~c~g~G~~~~~~~f~~----~v~~~c~~c~G~r~ 672 (842)
T 2vf7_A 640 RCEHCQGEGWVMVELLFLP----SVYAPCPVCHGTRY 672 (842)
T ss_dssp BCTTTTTCSEEEETTCSSS----CEEEECTTTTTCCB
T ss_pred ccccccCCCccchhhhcCC----ccceecccccCccc
Confidence 3999999997654333332 34567888877754
No 75
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=26.81 E-value=65 Score=26.27 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=35.3
Q ss_pred CCCCCCC-HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhhCCcccccccccccc
Q 015690 5 ESRKNAS-QDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGE 61 (402)
Q Consensus 5 gv~~~As-~~eIkkAYrklA~k~HPDkn~~~~kFk~i~~AYevLsd~~kR~~YD~~G~ 61 (402)
|+++++. ..+|-+.++.+...+.++. +++.|..|.+-|. .||.-++.||++|.
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~--s~e~~~~L~~mYv--~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDC--GYEMHTCLGEMYV--SDERFTRNIDAAKP 124 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCC--CHHHHHHHHHHTT--STHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCC--CHHHHHHHHHHHh--cCHHHHHhHcccCh
Confidence 4544432 2345555666544545554 5688988888876 78998999999864
No 76
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.65 E-value=66 Score=21.62 Aligned_cols=8 Identities=25% Similarity=1.020 Sum_probs=4.1
Q ss_pred eeeCCCCC
Q 015690 173 QHPCNECK 180 (402)
Q Consensus 173 ~~~C~~C~ 180 (402)
...|+.|+
T Consensus 37 R~~C~kCG 44 (50)
T 3j20_Y 37 RWACGKCG 44 (50)
T ss_dssp EEECSSSC
T ss_pred eEECCCCC
Confidence 34565553
No 77
>3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A
Probab=26.33 E-value=46 Score=26.01 Aligned_cols=40 Identities=20% Similarity=0.548 Sum_probs=26.1
Q ss_pred cCCceeeeeccC---HHHHhcCCEEEEeccCCcEEEEEeCCCc
Q 015690 253 KGDDLFVEHTLS---LTEALCGFQFVITHLDGRQLLIKSQPGE 292 (402)
Q Consensus 253 ~g~dL~~~~~I~---l~eAl~G~~~~i~tldG~~l~v~i~~g~ 292 (402)
++.++++....+ ..+.....++.|++++|+.+.|.+++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~m~I~Vk~~~G~~~~l~v~~~~ 56 (111)
T 3vdz_A 14 DGDELYIDTDNDGSIDGDELLAMQIFVKTLTGKTITLEVEPSD 56 (111)
T ss_dssp CGGGEEECTTCSSCCCTGGGGCEEEEEECSSSCEEEEEECTTC
T ss_pred CCceeccccccccccCcCCCccEEEEEEeCCCCEEEEEeCCCC
Confidence 456677766554 3344445677888888887777777654
No 78
>2ftc_B Mitochondrial ribosomal protein L2; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_B
Probab=25.32 E-value=2.8e+02 Score=22.68 Aligned_cols=70 Identities=16% Similarity=0.162 Sum_probs=44.0
Q ss_pred EEEEecCCCcCCCEEecCCC----------cCC--CCCCCCccEEEEEEEecCCC--ccccCCceeeeeccCHHHHhcCC
Q 015690 207 LEVIVEKGMQNGQKITFPGE----------ADE--APDTVTGDIVFVLQQKEHPK--FKRKGDDLFVEHTLSLTEALCGF 272 (402)
Q Consensus 207 l~V~Ip~G~~~G~~i~~~ge----------G~~--~~g~~~GDliv~i~v~~h~~--f~R~g~dL~~~~~I~l~eAl~G~ 272 (402)
--|--|.|++.|+.|..-.+ |+. ....+.|.++..|..+|-.. |.|.- |.
T Consensus 24 ~yIlAp~gl~~Gd~I~s~~~~g~~a~~i~~GN~lpL~~iP~Gt~IhNIE~~pG~gg~laRsA----------------Gt 87 (136)
T 2ftc_B 24 RWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAA----------------GT 87 (136)
T ss_pred EEEEeecCCcCCCEEEECCcccccccccCcCcEEEecccCCCCEEEEEeccCCCCcEEEEeC----------------CC
Confidence 35667899999999986322 333 23457799999998887654 55542 33
Q ss_pred EEEEeccCCcEEEEEeCCCc
Q 015690 273 QFVITHLDGRQLLIKSQPGE 292 (402)
Q Consensus 273 ~~~i~tldG~~l~v~i~~g~ 292 (402)
...|-.-++....|++|.|+
T Consensus 88 ~a~ii~ke~~~~~vrLPSGe 107 (136)
T 2ftc_B 88 CGVLLRKVNGTAIIQLPSKR 107 (136)
T ss_pred eEEEEEecCCEEEEECCCCC
Confidence 33332225555667777664
No 79
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=23.41 E-value=1.3e+02 Score=25.21 Aligned_cols=50 Identities=16% Similarity=0.142 Sum_probs=33.0
Q ss_pred hcCCEEEEeccCCc-EEEEEeCCCccccCCceEEecCCCCCCCCCCCCCCcEEE
Q 015690 269 LCGFQFVITHLDGR-QLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI 321 (402)
Q Consensus 269 l~G~~~~i~tldG~-~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~i 321 (402)
|-|+++.= ..||. .+.+++|++.+++||..++|-..|.-....+ -.||+.
T Consensus 64 L~GW~L~r-~vdg~~~~~y~Fp~~~~L~pg~tVtIws~~~g~~~~p--p~dlv~ 114 (151)
T 1ufg_A 64 MGNWQIRR-QNGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATHSP--PTDLVW 114 (151)
T ss_dssp CSSCEEEE-EETTSCCEEEECCTTCEECTTCEEEEEESSSSCCCCT--TTEEEE
T ss_pred cCCCEEEE-ecCCCccEEEEECCCcEECCCCEEEEEeCCCCCCCCC--chhEEE
Confidence 44555443 34554 3678899999999999999998775322222 356665
No 80
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=23.18 E-value=41 Score=25.23 Aligned_cols=53 Identities=25% Similarity=0.359 Sum_probs=27.7
Q ss_pred eeeecCCccCCCcccCce---eeCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcceEE
Q 015690 129 RNVICTKCKGKGSKSGAS---MKCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI 186 (402)
Q Consensus 129 r~~~C~~C~G~G~~~~~~---~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 186 (402)
+.+.|..|+..|-....- ..|-.|...|.+...... | .....|-.|+..|.+-
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~-p----~~~~~CYnCG~~GH~~ 59 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVL-P----FHTIYCYNCGGKGHFG 59 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC------------------CCCBCSSSSCBSSCG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccC-C----CCCCeecccCCCCcCc
Confidence 457899999988665432 368888888865332211 1 1246799999999764
No 81
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=22.97 E-value=84 Score=24.31 Aligned_cols=23 Identities=22% Similarity=0.540 Sum_probs=18.5
Q ss_pred EEEEEEEeCCCCCCHHHHHHHHh
Q 015690 319 LYIHFTVDFPESLSPDQCKMLET 341 (402)
Q Consensus 319 L~i~~~V~~P~~l~~~~~~~l~~ 341 (402)
..|++.|.+|..++++++..|+.
T Consensus 3 FlV~m~V~~P~~~~~~~~~~~~a 25 (96)
T 1mli_A 3 FHVKMTVKLPVDMDPAKATQLKA 25 (96)
T ss_pred EEEEEEeeCCCCCCHHHHHHHHH
Confidence 46899999999999988666543
No 82
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=22.88 E-value=40 Score=36.97 Aligned_cols=33 Identities=27% Similarity=0.699 Sum_probs=22.0
Q ss_pred eCCCCcCCceEEEEEecCCceeeEeeeeCCCCCCcce
Q 015690 148 KCSGCQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGE 184 (402)
Q Consensus 148 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 184 (402)
.|+.|.|.|++....+.- .....+|..|+|+..
T Consensus 755 rC~~C~g~G~i~~em~fl----~~v~~~ce~c~G~r~ 787 (972)
T 2r6f_A 755 RCEACHGDGIIKIEMHFL----PDVYVPCEVCHGKRY 787 (972)
T ss_dssp BCTTTTTCSEEEECCSSS----CCEEEECTTTTTCCB
T ss_pred cccccccccceeeehhcc----ccccccccccccccc
Confidence 499999999765443332 234567888888753
No 83
>1gmu_A UREE; metallochaperone; 1.5A {Klebsiella aerogenes} SCOP: b.107.1.1 d.58.38.1 PDB: 1gmw_A 1gmw_D 1gmv_A
Probab=20.33 E-value=1.9e+02 Score=23.83 Aligned_cols=45 Identities=16% Similarity=0.153 Sum_probs=36.5
Q ss_pred eeeccCHHHHhcCCEEEEeccCCcEEEEEeCCCccccCCceEEecC
Q 015690 259 VEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAIND 304 (402)
Q Consensus 259 ~~~~I~l~eAl~G~~~~i~tldG~~l~v~i~~g~vi~~g~~~~i~g 304 (402)
-.+.++..++ .=-...+.|-+|+.+-|.+|.+..++.|+++....
T Consensus 16 ~~v~L~~~~r-~k~R~r~~t~~G~e~~l~L~r~~~L~dGDvL~~dd 60 (143)
T 1gmu_A 16 ASVTLPIDVR-VKSRVKVTLNDGRDAGLLLPRGLLLRGGDVLSNEE 60 (143)
T ss_dssp EEEEECHHHH-TCSEEEEECTTSCEEEEECCSSCCCCTTCEEECTT
T ss_pred eEEEeCHHHH-hcceEEEECCCCCEEEEECCCCcccCCCCEEEECC
Confidence 4567787777 33467888999999999999999999999987653
No 84
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.02 E-value=41 Score=24.95 Aligned_cols=43 Identities=21% Similarity=0.330 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhhCCccccccccc
Q 015690 16 KKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQ 58 (402)
Q Consensus 16 kkAYrklA~k~HPDkn~~~~kFk~i~~AYevLsd~~kR~~YD~ 58 (402)
-+.+|...++-||+.....+.-+.|.+.+..|++.+|..-.+.
T Consensus 17 ~~e~R~~ik~~~P~~~~~~eisK~lge~Wk~ls~eeK~~y~~~ 59 (81)
T 2d7l_A 17 LEENRSNILSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANK 59 (81)
T ss_dssp HHHHHHHHHHHCTTCCSHHHHHHHHHHHHSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCchhHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3456777788899986235788899999999998887654444
Done!