Query 015691
Match_columns 402
No_of_seqs 270 out of 932
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 17:00:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015691.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015691hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1am9_A Srebp-1A, protein (ster 99.6 5.3E-17 1.8E-21 131.1 4.2 64 243-306 7-70 (82)
2 4ati_A MITF, microphthalmia-as 99.6 2.2E-16 7.6E-21 135.5 7.1 70 232-301 17-89 (118)
3 1a0a_A BHLH, protein (phosphat 99.5 1.2E-15 4.2E-20 118.1 1.8 54 243-296 3-62 (63)
4 1an4_A Protein (upstream stimu 99.5 2.5E-15 8.7E-20 115.7 2.9 55 242-296 5-64 (65)
5 4h10_B Circadian locomoter out 99.5 4.9E-15 1.7E-19 117.7 4.1 57 243-299 9-65 (71)
6 4h10_A ARYL hydrocarbon recept 99.5 3.1E-15 1.1E-19 119.2 0.8 53 240-293 7-63 (73)
7 1nkp_B MAX protein, MYC proto- 99.5 2.3E-14 7.9E-19 115.1 5.5 62 244-306 4-67 (83)
8 1hlo_A Protein (transcription 99.5 2.7E-14 9.3E-19 114.3 5.8 61 244-305 14-76 (80)
9 1nkp_A C-MYC, MYC proto-oncoge 99.4 1.1E-13 3.7E-18 113.4 6.3 60 244-304 8-70 (88)
10 3u5v_A Protein MAX, transcript 99.3 4.3E-13 1.5E-17 107.5 3.6 56 244-299 7-65 (76)
11 1nlw_A MAD protein, MAX dimeri 99.3 3.9E-12 1.3E-16 102.6 7.0 61 244-305 3-66 (80)
12 1mdy_A Protein (MYOD BHLH doma 98.9 2.3E-10 7.8E-15 90.0 2.4 52 244-296 14-67 (68)
13 4f3l_A Mclock, circadian locom 98.9 7.6E-10 2.6E-14 107.5 5.9 53 242-295 12-65 (361)
14 2ql2_B Neurod1, neurogenic dif 98.9 2E-09 6.8E-14 82.7 5.3 52 245-296 5-58 (60)
15 4f3l_B BMAL1B; BHLH, PAS, circ 98.8 1.5E-09 5.3E-14 106.8 3.3 53 241-294 12-68 (387)
16 4ath_A MITF, microphthalmia-as 98.6 3.2E-08 1.1E-12 80.9 5.6 48 253-301 3-54 (83)
17 2lfh_A DNA-binding protein inh 98.4 1.1E-07 3.7E-12 75.1 2.7 46 247-293 19-67 (68)
18 4aya_A DNA-binding protein inh 97.7 6.3E-05 2.2E-09 63.1 6.4 49 250-298 33-83 (97)
19 2wt7_A Proto-oncogene protein 51.8 8.2 0.00028 29.1 2.4 46 250-309 1-46 (63)
20 2er8_A Regulatory protein Leu3 42.8 17 0.00057 27.0 2.9 21 286-306 49-69 (72)
21 3coq_A Regulatory protein GAL4 41.3 19 0.00065 27.5 3.1 26 286-311 45-70 (89)
22 1zme_C Proline utilization tra 38.1 21 0.00073 26.1 2.8 21 286-306 44-64 (70)
23 2jee_A YIIU; FTSZ, septum, coi 31.7 41 0.0014 27.2 3.6 28 281-308 15-42 (81)
24 2wuj_A Septum site-determining 30.3 52 0.0018 24.3 3.8 29 279-307 27-55 (57)
25 1pyi_A Protein (pyrimidine pat 30.1 42 0.0014 26.0 3.4 22 286-307 48-69 (96)
26 3muj_A Transcription factor CO 29.3 57 0.0019 28.8 4.4 35 256-291 95-133 (138)
27 1hwt_C Protein (heme activator 27.9 30 0.001 26.0 2.1 22 285-306 57-78 (81)
28 1dh3_A Transcription factor CR 27.1 43 0.0015 24.7 2.8 20 286-305 22-41 (55)
29 2oqq_A Transcription factor HY 24.3 28 0.00097 25.1 1.3 25 286-310 3-27 (42)
30 1g70_B RSG-1.2 peptide; peptid 22.2 40 0.0014 21.6 1.5 11 246-256 9-19 (26)
31 1gd2_E Transcription factor PA 21.6 60 0.002 25.3 2.8 20 286-305 29-48 (70)
32 1gk7_A Vimentin; intermediate 21.2 1.1E+02 0.0037 21.4 3.7 24 281-304 15-38 (39)
No 1
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=99.65 E-value=5.3e-17 Score=131.11 Aligned_cols=64 Identities=23% Similarity=0.380 Sum_probs=58.5
Q ss_pred CCccchhHHHhHHHHHHHHHHHhccCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 015691 243 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 306 (402)
Q Consensus 243 ~~~HslaERrRRekIner~~~Lr~LVP~~~K~tdKAsIL~eAIdYIk~LQ~QVq~Le~~~~~~~ 306 (402)
+.+|+++||+||++||++|..|++|||+++.+.+|++||++||+||++||.+++.|+.++..+.
T Consensus 7 r~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~~L~ 70 (82)
T 1am9_A 7 RTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLR 70 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999844459999999999999999999999999887664
No 2
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=99.64 E-value=2.2e-16 Score=135.54 Aligned_cols=70 Identities=29% Similarity=0.405 Sum_probs=51.0
Q ss_pred cccccccCCCcCCccchhHHHhHHHHHHHHHHHhccCCCCCC---CCChhhhHHHHHHHHHHHHHHHHHHHhh
Q 015691 232 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK---ITGKAVMLDEIINYVQSLQQQVEFLSMK 301 (402)
Q Consensus 232 ~~~~RakR~~a~~~HslaERrRRekIner~~~Lr~LVP~~~K---~tdKAsIL~eAIdYIk~LQ~QVq~Le~~ 301 (402)
..+.++++.+.+.+|+++||+||++||++|..|++|||.|.+ +.+|++||++||+||++||.+++.|+..
T Consensus 17 ~~~~~~k~~~kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~~~~~k~~Ka~IL~~aieYIk~Lq~~~~~l~~~ 89 (118)
T 4ati_A 17 EARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDL 89 (118)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHSCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667777888899999999999999999999999999863 2489999999999999999999999864
No 3
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1
Probab=99.53 E-value=1.2e-15 Score=118.13 Aligned_cols=54 Identities=30% Similarity=0.441 Sum_probs=48.0
Q ss_pred CCccchhHHHhHHHHHHHHHHHhccCCCCCCC------CChhhhHHHHHHHHHHHHHHHH
Q 015691 243 TNSHSLAERVRREKISERMRLLQELVPGCNKI------TGKAVMLDEIINYVQSLQQQVE 296 (402)
Q Consensus 243 ~~~HslaERrRRekIner~~~Lr~LVP~~~K~------tdKAsIL~eAIdYIk~LQ~QVq 296 (402)
+++|+++||+||++||..|..|+.|||.|.+. .+||+||+.||+||+.||++|+
T Consensus 3 r~~H~~aEr~RR~rIn~~~~~L~~LlP~~~~~~~~~~k~sKa~iL~~Ai~YIk~Lq~~~~ 62 (63)
T 1a0a_A 3 RESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGS 62 (63)
T ss_dssp TTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCSC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHCCCcccccccCCcccHHHHHHHHHHHHHHHHHHhh
Confidence 36899999999999999999999999977432 3699999999999999998764
No 4
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1
Probab=99.53 E-value=2.5e-15 Score=115.69 Aligned_cols=55 Identities=27% Similarity=0.432 Sum_probs=49.2
Q ss_pred cCCccchhHHHhHHHHHHHHHHHhccCCCCCC-----CCChhhhHHHHHHHHHHHHHHHH
Q 015691 242 ATNSHSLAERVRREKISERMRLLQELVPGCNK-----ITGKAVMLDEIINYVQSLQQQVE 296 (402)
Q Consensus 242 a~~~HslaERrRRekIner~~~Lr~LVP~~~K-----~tdKAsIL~eAIdYIk~LQ~QVq 296 (402)
.+..|+++||+||++||+.|..|++|||.|.. ..+|++||++||+||++||++++
T Consensus 5 rr~~H~~~Er~RR~~in~~~~~L~~lvP~~~~~~~~~k~~Ka~IL~~ai~YI~~Lq~~~~ 64 (65)
T 1an4_A 5 RRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQSNH 64 (65)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHTTTC
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHCcCcccccccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 45689999999999999999999999999872 24999999999999999998753
No 5
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.52 E-value=4.9e-15 Score=117.72 Aligned_cols=57 Identities=19% Similarity=0.415 Sum_probs=51.2
Q ss_pred CCccchhHHHhHHHHHHHHHHHhccCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHH
Q 015691 243 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 299 (402)
Q Consensus 243 ~~~HslaERrRRekIner~~~Lr~LVP~~~K~tdKAsIL~eAIdYIk~LQ~QVq~Le 299 (402)
+.+|+++||+||++||++|..|++|||++..+.||++||+.||+||+.||.++.-|+
T Consensus 9 R~~Hn~iErrRRd~IN~~i~eL~~LvP~~~~K~dK~sIL~~aI~yik~Lq~~~~~~~ 65 (71)
T 4h10_B 9 RVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAWLE 65 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSSSCCSCCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhhhHHHhhHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhhhHHH
Confidence 458999999999999999999999999865334999999999999999999987765
No 6
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=99.49 E-value=3.1e-15 Score=119.19 Aligned_cols=53 Identities=30% Similarity=0.504 Sum_probs=47.7
Q ss_pred CCcCCccchhHHHhHHHHHHHHHHHhccCCCC----CCCCChhhhHHHHHHHHHHHHH
Q 015691 240 GQATNSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQQ 293 (402)
Q Consensus 240 ~~a~~~HslaERrRRekIner~~~Lr~LVP~~----~K~tdKAsIL~eAIdYIk~LQ~ 293 (402)
.+++.+|+++||+||++||+.|..|+.|||.| .|+ |||+||+.||+||+.|+.
T Consensus 7 ~~rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~~~~~~Kl-dKasIL~~tV~ylk~l~~ 63 (73)
T 4h10_A 7 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL-DKLTVLRMAVQHMKTLRG 63 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHTCSSCC-CHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHHccccccccccc-cHHHHHHHHHHHHHHHhc
Confidence 34456899999999999999999999999988 575 999999999999999974
No 7
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=99.48 E-value=2.3e-14 Score=115.12 Aligned_cols=62 Identities=24% Similarity=0.448 Sum_probs=56.8
Q ss_pred CccchhHHHhHHHHHHHHHHHhccCCCC--CCCCChhhhHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 015691 244 NSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 306 (402)
Q Consensus 244 ~~HslaERrRRekIner~~~Lr~LVP~~--~K~tdKAsIL~eAIdYIk~LQ~QVq~Le~~~~~~~ 306 (402)
..|+..||+||++||+.|..|+++||.+ .|+ +|++||..||+||+.|+.+++.|+.+++.+.
T Consensus 4 ~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k~-sK~~iL~~Ai~YI~~L~~~~~~l~~e~~~L~ 67 (83)
T 1nkp_B 4 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEKA-SRAQILDKATEYIQYMRRKNHTHQQDIDDLK 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSGGGTTSCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999985 665 9999999999999999999999998877653
No 8
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.48 E-value=2.7e-14 Score=114.29 Aligned_cols=61 Identities=25% Similarity=0.451 Sum_probs=56.9
Q ss_pred CccchhHHHhHHHHHHHHHHHhccCCCC--CCCCChhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 015691 244 NSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 305 (402)
Q Consensus 244 ~~HslaERrRRekIner~~~Lr~LVP~~--~K~tdKAsIL~eAIdYIk~LQ~QVq~Le~~~~~~ 305 (402)
..|+..||+||.+||+.|..|++|||.+ .|+ +|++||..||+||+.|+.+++.|+.+++.+
T Consensus 14 ~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k~-sK~~iL~~Ai~YI~~L~~~~~~L~~e~~~L 76 (80)
T 1hlo_A 14 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEKA-SRAQILDKATEYIQYMRRKNHTHQQDIDDL 76 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSGGGTTSCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHCcCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999987 465 999999999999999999999999988765
No 9
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=99.44 E-value=1.1e-13 Score=113.41 Aligned_cols=60 Identities=25% Similarity=0.387 Sum_probs=54.6
Q ss_pred CccchhHHHhHHHHHHHHHHHhccCCCC---CCCCChhhhHHHHHHHHHHHHHHHHHHHhhhhh
Q 015691 244 NSHSLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 304 (402)
Q Consensus 244 ~~HslaERrRRekIner~~~Lr~LVP~~---~K~tdKAsIL~eAIdYIk~LQ~QVq~Le~~~~~ 304 (402)
..|+..||+||+.||++|..|+++||.+ .|+ +|++||.+||+||++|+.+.+.|..+++.
T Consensus 8 ~~Hn~~ER~RR~~ln~~f~~Lr~~vP~~~~~~K~-sK~~iL~~A~~YI~~L~~~~~~l~~~~~~ 70 (88)
T 1nkp_A 8 RTHNVLERQRRNELKRSFFALRDQIPELENNEKA-PKVVILKKATAYILSVQAEEQKLISEEDL 70 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999986 465 99999999999999999999998877654
No 10
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A*
Probab=99.33 E-value=4.3e-13 Score=107.53 Aligned_cols=56 Identities=29% Similarity=0.379 Sum_probs=48.6
Q ss_pred CccchhHHHhHHHHHHHHHHHhccCCCC---CCCCChhhhHHHHHHHHHHHHHHHHHHH
Q 015691 244 NSHSLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQQVEFLS 299 (402)
Q Consensus 244 ~~HslaERrRRekIner~~~Lr~LVP~~---~K~tdKAsIL~eAIdYIk~LQ~QVq~Le 299 (402)
..|+..||+||+.||+.|..|+.+||.+ .|...|+.||..||+||++||++|++++
T Consensus 7 ~~hN~~ER~Rr~~IN~~f~~Lr~~vP~~~~~~K~~sK~~IL~~AieYI~~Lq~~l~e~~ 65 (76)
T 3u5v_A 7 AHHNALERKRRRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVRERN 65 (76)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhchHHHhhhHHHHHHHHHHHHHHcCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999999999999953 3432688999999999999999999875
No 11
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=99.29 E-value=3.9e-12 Score=102.62 Aligned_cols=61 Identities=16% Similarity=0.220 Sum_probs=55.1
Q ss_pred CccchhHHHhHHHHHHHHHHHhccCCCC---CCCCChhhhHHHHHHHHHHHHHHHHHHHhhhhhc
Q 015691 244 NSHSLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 305 (402)
Q Consensus 244 ~~HslaERrRRekIner~~~Lr~LVP~~---~K~tdKAsIL~eAIdYIk~LQ~QVq~Le~~~~~~ 305 (402)
..|+..||+||..||+.|..|+++||.+ .|. .|++||.+||+||+.|+.+.+.|..+.+.+
T Consensus 3 ~~HN~~ER~RR~~lk~~f~~Lr~~vP~~~~~~k~-sk~~iL~kA~~yI~~L~~~~~~l~~e~~~L 66 (80)
T 1nlw_A 3 STHNEMEKNRRAHLRLSLEKLKGLVPLGPDSSRH-TTLSLLTKAKLHIKKLEDSDRKAVHQIDQL 66 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSCCC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3799999999999999999999999965 454 899999999999999999999999877654
No 12
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=98.94 E-value=2.3e-10 Score=90.01 Aligned_cols=52 Identities=23% Similarity=0.413 Sum_probs=46.7
Q ss_pred CccchhHHHhHHHHHHHHHHHhccCCCC--CCCCChhhhHHHHHHHHHHHHHHHH
Q 015691 244 NSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVE 296 (402)
Q Consensus 244 ~~HslaERrRRekIner~~~Lr~LVP~~--~K~tdKAsIL~eAIdYIk~LQ~QVq 296 (402)
..|+..||+|+..||+.|..|+++||.. .|+ +|+.||..||+||++|++.++
T Consensus 14 ~~aN~rER~R~~~iN~af~~LR~~iP~~~~~Kl-SKi~tLr~Ai~YI~~L~~~L~ 67 (68)
T 1mdy_A 14 KAATMRERRRLSKVNEAFETLKRSTSSNPNQRL-PKVEILRNAIRYIEGLQALLR 67 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCSCTTSCC-CHHHHHHHHHHHHHHHHHTTC
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHHHHHHHHHHHHc
Confidence 4699999999999999999999999964 454 899999999999999998653
No 13
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=98.92 E-value=7.6e-10 Score=107.50 Aligned_cols=53 Identities=19% Similarity=0.422 Sum_probs=41.8
Q ss_pred cCCccchhHHHhHHHHHHHHHHHhccCC-CCCCCCChhhhHHHHHHHHHHHHHHH
Q 015691 242 ATNSHSLAERVRREKISERMRLLQELVP-GCNKITGKAVMLDEIINYVQSLQQQV 295 (402)
Q Consensus 242 a~~~HslaERrRRekIner~~~Lr~LVP-~~~K~tdKAsIL~eAIdYIk~LQ~QV 295 (402)
.+.+|+++||+||++||+.|..|+.||| ...|+ ||++||..||+|||.|+...
T Consensus 12 ~~~~~~~~e~~rr~~~n~~~~~l~~~~p~~~~~~-dk~~il~~~~~~~~~~~~~~ 65 (361)
T 4f3l_A 12 KRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKM-DKSTVLQKSIDFLRKHKETT 65 (361)
T ss_dssp -------CHHHHHHHHHHHHHHHHHTCCSSSCCC-CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCc-CHHHHHHHHHHHHHHHHhhc
Confidence 3458999999999999999999999999 44565 99999999999999998643
No 14
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}
Probab=98.87 E-value=2e-09 Score=82.66 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=46.1
Q ss_pred ccchhHHHhHHHHHHHHHHHhccCCCCC--CCCChhhhHHHHHHHHHHHHHHHH
Q 015691 245 SHSLAERVRREKISERMRLLQELVPGCN--KITGKAVMLDEIINYVQSLQQQVE 296 (402)
Q Consensus 245 ~HslaERrRRekIner~~~Lr~LVP~~~--K~tdKAsIL~eAIdYIk~LQ~QVq 296 (402)
.|+..||+|+..||+.|..||.+||... ++..|..+|..||+||+.|++.++
T Consensus 5 ~~N~rER~R~~~iN~af~~LR~~lP~~~~~~klSKi~tLr~Ai~YI~~L~~~L~ 58 (60)
T 2ql2_B 5 KANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 58 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSCCSSSCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHccCCCCcCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999653 334999999999999999998764
No 15
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=98.80 E-value=1.5e-09 Score=106.79 Aligned_cols=53 Identities=28% Similarity=0.423 Sum_probs=47.4
Q ss_pred CcCCccchhHHHhHHHHHHHHHHHhccCC----CCCCCCChhhhHHHHHHHHHHHHHH
Q 015691 241 QATNSHSLAERVRREKISERMRLLQELVP----GCNKITGKAVMLDEIINYVQSLQQQ 294 (402)
Q Consensus 241 ~a~~~HslaERrRRekIner~~~Lr~LVP----~~~K~tdKAsIL~eAIdYIk~LQ~Q 294 (402)
+++.+|+.+||+||+|||+.|..|+.||| ...|+ ||++||..||+|||.|+..
T Consensus 12 ~~~~~~~~~ek~rR~~~n~~~~~L~~l~p~~~~~~~k~-dk~~il~~~~~~l~~~~~~ 68 (387)
T 4f3l_B 12 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL-DKLTVLRMAVQHMKTLRGA 68 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCSSCC-CHHHHHHHHHHHHHHHHCC
T ss_pred hhcccccchhhcchHHHHHHHHHHHHhcCCCCcccccc-CHHHHHHHHHHHHHHhhcc
Confidence 34568999999999999999999999999 45676 9999999999999999843
No 16
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=98.63 E-value=3.2e-08 Score=80.86 Aligned_cols=48 Identities=25% Similarity=0.443 Sum_probs=42.0
Q ss_pred hHHHHHHHHHHHhccCCCCC----CCCChhhhHHHHHHHHHHHHHHHHHHHhh
Q 015691 253 RREKISERMRLLQELVPGCN----KITGKAVMLDEIINYVQSLQQQVEFLSMK 301 (402)
Q Consensus 253 RRekIner~~~Lr~LVP~~~----K~tdKAsIL~eAIdYIk~LQ~QVq~Le~~ 301 (402)
-|..||++|..|..|||.+. |. +|++||..+|+||++||++++.+.+.
T Consensus 3 ~R~nIN~~I~EL~~LiP~~~~~~~k~-nKg~IL~ksvdYI~~Lq~e~~r~~e~ 54 (83)
T 4ath_A 3 MRFNINDRIKELGTLIPKSNDPDMRW-NKGTILKASVDYIRKLQREQQRAKDL 54 (83)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCTTCCC-SHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred chhhHHHhhhhhhccCCCCCCcccCc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999874 44 89999999999999999888777643
No 17
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=98.39 E-value=1.1e-07 Score=75.15 Aligned_cols=46 Identities=24% Similarity=0.437 Sum_probs=40.7
Q ss_pred chhHHHhHHHHHHHHHHHhccCCCC---CCCCChhhhHHHHHHHHHHHHH
Q 015691 247 SLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQ 293 (402)
Q Consensus 247 slaERrRRekIner~~~Lr~LVP~~---~K~tdKAsIL~eAIdYIk~LQ~ 293 (402)
+..||+|+..||+.|..||.+||.. .|+ +|..+|..||+||..||.
T Consensus 19 ~erER~Rm~~lN~aF~~LR~~VP~~p~~kKL-SKiEtLr~Ai~YI~~Lq~ 67 (68)
T 2lfh_A 19 AEEPLSLLDDMNHCYSRLRELVPGVPRGTQL-SQVEILQRVIDYILDLQV 67 (68)
T ss_dssp BCCCSCSSSHHHHHHHHHHHHCCCCCTTCCC-CHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCCCCCCCCc-cHHHHHHHHHHHHHHHHc
Confidence 3458999999999999999999965 454 899999999999999984
No 18
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens}
Probab=97.69 E-value=6.3e-05 Score=63.05 Aligned_cols=49 Identities=27% Similarity=0.358 Sum_probs=41.4
Q ss_pred HHHhHHHHHHHHHHHhccCCCC--CCCCChhhhHHHHHHHHHHHHHHHHHH
Q 015691 250 ERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVEFL 298 (402)
Q Consensus 250 ERrRRekIner~~~Lr~LVP~~--~K~tdKAsIL~eAIdYIk~LQ~QVq~L 298 (402)
||.|=..||+.|..||.+||.. +++..|..+|.-||+||+.|+..++.-
T Consensus 33 ~r~Rm~~lN~AF~~LR~~vP~~p~~kKLSKIETLRlAi~YI~~Lq~~L~~~ 83 (97)
T 4aya_A 33 PMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALDSH 83 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCSSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 5778888999999999999964 333489999999999999999877643
No 19
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=51.82 E-value=8.2 Score=29.14 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=31.6
Q ss_pred HHHhHHHHHHHHHHHhccCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHhhhhhcCCcc
Q 015691 250 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 309 (402)
Q Consensus 250 ERrRRekIner~~~Lr~LVP~~~K~tdKAsIL~eAIdYIk~LQ~QVq~Le~~~~~~~p~~ 309 (402)
||++|.+..+++.+.+. .. .-.+||..|+.+|+.|+.+...+..++
T Consensus 1 Ekr~rrrerNR~AA~rc-----R~---------rKk~~~~~Le~~v~~L~~~n~~L~~ei 46 (63)
T 2wt7_A 1 EKRRIRRERNKMAAAKC-----RN---------RRRELTDTLQAETDQLEDEKSALQTEI 46 (63)
T ss_dssp CHHHHHHHHHHHHHHHH-----HH---------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHhHHHHHHH-----HH---------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777777788877774 21 123788888888888887776665443
No 20
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=42.76 E-value=17 Score=26.95 Aligned_cols=21 Identities=10% Similarity=0.235 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHhhhhhcC
Q 015691 286 NYVQSLQQQVEFLSMKLATVN 306 (402)
Q Consensus 286 dYIk~LQ~QVq~Le~~~~~~~ 306 (402)
.||..|+.+|+.|+..+..+.
T Consensus 49 ~~~~~Le~ri~~Le~~l~~l~ 69 (72)
T 2er8_A 49 ARNEAIEKRFKELTRTLTNLT 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999888764
No 21
>3coq_A Regulatory protein GAL4; helix bundle, protein-DNA complex; HET: DNA; 2.40A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1
Probab=41.28 E-value=19 Score=27.47 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCcccc
Q 015691 286 NYVQSLQQQVEFLSMKLATVNPELNL 311 (402)
Q Consensus 286 dYIk~LQ~QVq~Le~~~~~~~p~~~~ 311 (402)
.||..|+.+|+.|+..+..+.+..++
T Consensus 45 ~~~~~L~~r~~~le~~l~~l~~~~~l 70 (89)
T 3coq_A 45 AHLTEVESRLERLEQLFLLIFPREDL 70 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchhh
Confidence 69999999999999999998886554
No 22
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=38.06 E-value=21 Score=26.07 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcC
Q 015691 286 NYVQSLQQQVEFLSMKLATVN 306 (402)
Q Consensus 286 dYIk~LQ~QVq~Le~~~~~~~ 306 (402)
.||..|+.+|+.|+..+..+.
T Consensus 44 ~~~~~L~~ri~~Le~~l~~l~ 64 (70)
T 1zme_C 44 KYLQQLQKDLNDKTEENNRLK 64 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 577888888888887776553
No 23
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=31.72 E-value=41 Score=27.19 Aligned_cols=28 Identities=25% Similarity=0.343 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCc
Q 015691 281 LDEIINYVQSLQQQVEFLSMKLATVNPE 308 (402)
Q Consensus 281 L~eAIdYIk~LQ~QVq~Le~~~~~~~p~ 308 (402)
++.||+-|.-||.+|++|..+...+...
T Consensus 15 Iq~avdtI~lLqmEieELKekN~~L~~e 42 (81)
T 2jee_A 15 VQQAIDTITLLQMEIEELKEKNNSLSQE 42 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999998776543
No 24
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=30.27 E-value=52 Score=24.33 Aligned_cols=29 Identities=10% Similarity=0.137 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhcCC
Q 015691 279 VMLDEIINYVQSLQQQVEFLSMKLATVNP 307 (402)
Q Consensus 279 sIL~eAIdYIk~LQ~QVq~Le~~~~~~~p 307 (402)
..|++.++-+..|.++++.|+.++..++.
T Consensus 27 ~FLd~v~~~~~~l~~e~~~L~~~~~~l~~ 55 (57)
T 2wuj_A 27 EFLAQVRKDYEIVLRKKTELEAKVNELDE 55 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45999999999999999999999887754
No 25
>1pyi_A Protein (pyrimidine pathway regulator 1); protein-DNA complex, transcription/DNA complex, GAL4, zinc finger, Zn2Cys6, binuclear cluster; HET: DNA; 3.20A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1
Probab=30.14 E-value=42 Score=26.01 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcCC
Q 015691 286 NYVQSLQQQVEFLSMKLATVNP 307 (402)
Q Consensus 286 dYIk~LQ~QVq~Le~~~~~~~p 307 (402)
.||+.|+.+|+.|+..+..+..
T Consensus 48 ~~~~~Le~rl~~le~~l~~~~~ 69 (96)
T 1pyi_A 48 SYVFFLEDRLAVMMRVLKEYGV 69 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 5999999999999988876543
No 26
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=29.26 E-value=57 Score=28.80 Aligned_cols=35 Identities=26% Similarity=0.475 Sum_probs=29.3
Q ss_pred HHHHHHHHHhccCCCC----CCCCChhhhHHHHHHHHHHH
Q 015691 256 KISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSL 291 (402)
Q Consensus 256 kIner~~~Lr~LVP~~----~K~tdKAsIL~eAIdYIk~L 291 (402)
.|.-.|..|+.+||.- .++ -|-.||..|-|++..|
T Consensus 95 tId~gfqrl~k~~pr~pgdpe~l-pk~~~lkraa~l~e~~ 133 (138)
T 3muj_A 95 TIDYGFQRLQKVIPRHPGDPERL-PKEVLLKRAADLVEAL 133 (138)
T ss_dssp CHHHHHHHHHHHSCCCTTCCSSC-CHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccccCCCCCChhhh-hHHHHHHHHHHHHHHH
Confidence 4788999999999953 454 7999999999998876
No 27
>1hwt_C Protein (heme activator protein); transcription factor, asymmetry, GAL4, complex activator/DNA, gene regulation/DNA complex; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 2hap_C* 1qp9_A* 1pyc_A
Probab=27.90 E-value=30 Score=26.02 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhcC
Q 015691 285 INYVQSLQQQVEFLSMKLATVN 306 (402)
Q Consensus 285 IdYIk~LQ~QVq~Le~~~~~~~ 306 (402)
-.||..|+.+|+.||..+..+.
T Consensus 57 ~~~~~~L~~ri~~LE~~l~~l~ 78 (81)
T 1hwt_C 57 DNELKKLRERVKSLEKTLSKVH 78 (81)
T ss_dssp HHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3799999999999998877653
No 28
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=27.07 E-value=43 Score=24.73 Aligned_cols=20 Identities=35% Similarity=0.527 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHhhhhhc
Q 015691 286 NYVQSLQQQVEFLSMKLATV 305 (402)
Q Consensus 286 dYIk~LQ~QVq~Le~~~~~~ 305 (402)
.||..|+.+|..|+.+...+
T Consensus 22 ~~~~~LE~~v~~L~~eN~~L 41 (55)
T 1dh3_A 22 EYVKSLENRVAVLENQNKTL 41 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 78999999999888776654
No 29
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=24.32 E-value=28 Score=25.05 Aligned_cols=25 Identities=24% Similarity=0.380 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCccc
Q 015691 286 NYVQSLQQQVEFLSMKLATVNPELN 310 (402)
Q Consensus 286 dYIk~LQ~QVq~Le~~~~~~~p~~~ 310 (402)
-|+-.|+.+++.|+.+.+.++.++.
T Consensus 3 aYl~eLE~r~k~le~~naeLEervs 27 (42)
T 2oqq_A 3 AYLSELENRVKDLENKNSELEERLS 27 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4888899998888888877766554
No 30
>1g70_B RSG-1.2 peptide; peptide-RNA complex, non-canonical base pairs, viral protein/RNA complex; NMR {Human immunodeficiency virus 1} SCOP: j.9.3.1
Probab=22.23 E-value=40 Score=21.61 Aligned_cols=11 Identities=55% Similarity=0.450 Sum_probs=8.0
Q ss_pred cchhHHHhHHH
Q 015691 246 HSLAERVRREK 256 (402)
Q Consensus 246 HslaERrRRek 256 (402)
-+-+||+||..
T Consensus 9 psgaerrrrra 19 (26)
T 1g70_B 9 PSGAERRRRRA 19 (26)
T ss_pred CchHHHHHHHH
Confidence 56788888754
No 31
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=21.59 E-value=60 Score=25.32 Aligned_cols=20 Identities=20% Similarity=0.215 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHhhhhhc
Q 015691 286 NYVQSLQQQVEFLSMKLATV 305 (402)
Q Consensus 286 dYIk~LQ~QVq~Le~~~~~~ 305 (402)
.||+.|+.+|..|+.....+
T Consensus 29 ~~i~~LE~~v~~le~~~~~l 48 (70)
T 1gd2_E 29 DHLKALETQVVTLKELHSST 48 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 78889988888888666543
No 32
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=21.22 E-value=1.1e+02 Score=21.36 Aligned_cols=24 Identities=29% Similarity=0.357 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhh
Q 015691 281 LDEIINYVQSLQQQVEFLSMKLAT 304 (402)
Q Consensus 281 L~eAIdYIk~LQ~QVq~Le~~~~~ 304 (402)
|..-|+-|++|+++-+.|+.++..
T Consensus 15 lAsyidkVR~LE~~N~~Le~~i~~ 38 (39)
T 1gk7_A 15 FANYIDKVRFLEQQNKILLAELEQ 38 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445678899999999999988764
Done!