Your job contains 1 sequence.
>015694
MAVQEGSPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMK
AINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK
GGYFVLNDVFRFVEENESLENNSDSVVNETAPTANVTEAPEPAHDQDHIPADRAIVIEGE
DLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIV
KVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA
EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSVQSAL
EVLSLISLSLIIKIVLGVYIISRTFIEVQILVEPLECALFGT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015694
(402 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173567 - symbol:AT5G60980 species:3702 "Arabi... 943 8.7e-95 1
TAIR|locus:2152566 - symbol:AT5G48650 species:3702 "Arabi... 394 1.3e-36 1
TAIR|locus:2023854 - symbol:AT1G13730 species:3702 "Arabi... 359 6.7e-33 1
TAIR|locus:2172472 - symbol:AT5G43960 species:3702 "Arabi... 308 1.7e-27 1
TAIR|locus:2026423 - symbol:AT1G69250 species:3702 "Arabi... 305 3.5e-27 1
TAIR|locus:2098555 - symbol:AT3G07250 species:3702 "Arabi... 213 3.8e-23 2
ZFIN|ZDB-GENE-030131-7452 - symbol:g3bp1 "GTPase activati... 217 8.2e-21 2
UNIPROTKB|E1C769 - symbol:G3BP2 "Uncharacterized protein"... 224 2.5e-20 2
UNIPROTKB|E2QYY6 - symbol:G3BP2 "Uncharacterized protein"... 251 1.5e-19 1
POMBASE|SPBP8B7.11 - symbol:nxt3 "ubiquitin protease cofa... 248 3.3e-19 1
UNIPROTKB|Q2KJ17 - symbol:G3BP2 "GTPase activating protei... 248 3.8e-19 1
ZFIN|ZDB-GENE-040426-2698 - symbol:zgc:56304 "zgc:56304" ... 229 5.1e-19 2
UNIPROTKB|I3LPH5 - symbol:G3BP2 "Uncharacterized protein"... 244 1.3e-18 1
FB|FBgn0015778 - symbol:rin "rasputin" species:7227 "Dros... 232 1.7e-18 2
RGD|1309571 - symbol:G3bp2 "GTPase activating protein (SH... 242 2.2e-18 1
MGI|MGI:2442040 - symbol:G3bp2 "GTPase activating protein... 233 3.7e-17 1
UNIPROTKB|Q9UN86 - symbol:G3BP2 "Ras GTPase-activating pr... 232 4.9e-17 1
UNIPROTKB|F6XCI1 - symbol:G3BP2 "Uncharacterized protein"... 232 5.1e-17 1
ASPGD|ASPL0000013038 - symbol:AN8268 species:162425 "Emer... 230 1.1e-16 1
MGI|MGI:1351465 - symbol:G3bp1 "GTPase activating protein... 228 1.3e-16 1
UNIPROTKB|Q13283 - symbol:G3BP1 "Ras GTPase-activating pr... 227 1.8e-16 1
UNIPROTKB|F1RQB6 - symbol:G3BP1 "Uncharacterized protein"... 226 2.3e-16 1
UNIPROTKB|Q32LC7 - symbol:G3BP "Ras GTPase-activating pro... 226 2.3e-16 1
UNIPROTKB|E2RN45 - symbol:G3BP1 "Uncharacterized protein"... 224 3.4e-16 1
UNIPROTKB|D6RAC7 - symbol:G3BP2 "Ras GTPase-activating pr... 205 3.7e-16 1
UNIPROTKB|D6RB17 - symbol:G3BP2 "Ras GTPase-activating pr... 205 3.7e-16 1
ZFIN|ZDB-GENE-070112-1972 - symbol:g3bp2 "GTPase activati... 224 5.1e-16 1
UNIPROTKB|Q5ZMN1 - symbol:G3BP1 "Uncharacterized protein"... 223 5.5e-16 1
UNIPROTKB|E5RJU8 - symbol:G3BP1 "Ras GTPase-activating pr... 196 3.8e-15 1
UNIPROTKB|E5RH42 - symbol:G3BP1 "Ras GTPase-activating pr... 192 1.0e-14 1
UNIPROTKB|Q5HYE9 - symbol:DKFZp313K0921 "Putative unchara... 192 1.0e-14 1
UNIPROTKB|E5RIZ6 - symbol:G3BP1 "Ras GTPase-activating pr... 187 3.8e-14 1
UNIPROTKB|F1LVS8 - symbol:F1LVS8 "Uncharacterized protein... 206 4.5e-14 1
UNIPROTKB|D6RGJ4 - symbol:G3BP2 "Ras GTPase-activating pr... 185 6.3e-14 1
UNIPROTKB|D6RBW8 - symbol:G3BP2 "Ras GTPase-activating pr... 183 1.0e-13 1
UNIPROTKB|F1M2M6 - symbol:F1M2M6 "Uncharacterized protein... 178 7.5e-13 2
TAIR|locus:2099926 - symbol:AT3G55540 species:3702 "Arabi... 190 1.3e-12 1
UNIPROTKB|D6RE13 - symbol:G3BP2 "Ras GTPase-activating pr... 163 1.7e-11 1
ASPGD|ASPL0000071333 - symbol:ntfA species:162425 "Emeric... 159 4.7e-11 1
UNIPROTKB|E5RI46 - symbol:G3BP1 "Ras GTPase-activating pr... 153 2.1e-10 1
UNIPROTKB|E5RIF8 - symbol:G3BP1 "Ras GTPase-activating pr... 153 2.1e-10 1
UNIPROTKB|D6RBR0 - symbol:G3BP2 "Ras GTPase-activating pr... 143 2.7e-09 1
UNIPROTKB|D6REX8 - symbol:G3BP2 "Ras GTPase-activating pr... 143 2.7e-09 1
DICTYBASE|DDB_G0276425 - symbol:nutf2 "nuclear transport ... 140 5.7e-09 1
POMBASE|SPAC15F9.03c - symbol:nxt2 "nuclear transport fac... 139 7.3e-09 1
GENEDB_PFALCIPARUM|PF14_0122 - symbol:PF14_0122 "nuclear ... 137 1.2e-08 1
UNIPROTKB|Q8ILX1 - symbol:PF14_0122 "Nuclear transport fa... 137 1.2e-08 1
DICTYBASE|DDB_G0277957 - symbol:DDB_G0277957 "nuclear tra... 122 1.4e-08 2
FB|FBgn0031145 - symbol:Ntf-2 "Nuclear transport factor-2... 136 1.6e-08 1
TAIR|locus:2200066 - symbol:NTL "NTF2-like" species:3702 ... 133 3.3e-08 1
FB|FBgn0032680 - symbol:Ntf-2r "Nuclear transport factor-... 128 1.2e-07 1
TAIR|locus:2010509 - symbol:NTF2B "AT1G27970" species:370... 128 1.2e-07 1
SGD|S000000811 - symbol:NTF2 "Nuclear envelope protein" s... 125 2.5e-07 1
MGI|MGI:1926034 - symbol:Celf3 "CUGBP, Elav-like family m... 150 2.9e-07 2
TAIR|locus:2015914 - symbol:NTF2A "AT1G27310" species:370... 124 3.2e-07 1
UNIPROTKB|F1ST15 - symbol:CELF3 "Uncharacterized protein"... 146 3.4e-07 1
WB|WBGene00004305 - symbol:ran-4 species:6239 "Caenorhabd... 123 4.1e-07 1
UNIPROTKB|Q5SZQ8 - symbol:CELF3 "CUGBP Elav-like family m... 144 5.6e-07 1
UNIPROTKB|Q08E07 - symbol:CELF3 "CUGBP Elav-like family m... 143 7.1e-07 1
RGD|1563168 - symbol:Celf3 "CUGBP, Elav-like family membe... 142 1.0e-06 1
UNIPROTKB|H0Y623 - symbol:CELF3 "CUGBP Elav-like family m... 144 1.4e-06 2
UNIPROTKB|E2RGA8 - symbol:CELF3 "Uncharacterized protein"... 139 2.6e-06 1
UNIPROTKB|Q5SZQ7 - symbol:CELF3 "CUGBP Elav-like family m... 135 4.6e-06 1
UNIPROTKB|D6RBM9 - symbol:G3BP2 "Ras GTPase-activating pr... 110 1.1e-05 1
SGD|S000005334 - symbol:BRE5 "Ubiquitin protease cofactor... 133 1.1e-05 1
UNIPROTKB|B4DQL3 - symbol:CELF3 "CUGBP Elav-like family m... 126 1.7e-05 1
UNIPROTKB|G4MRZ3 - symbol:MGG_02479 "Nuclear transport fa... 105 3.7e-05 1
UNIPROTKB|Q7ZWM3 - symbol:tnrc4-b "CUGBP Elav-like family... 127 4.3e-05 1
UNIPROTKB|Q91579 - symbol:tnrc4-a "CUGBP Elav-like family... 126 5.6e-05 1
ZFIN|ZDB-GENE-000501-2 - symbol:celf3a "cugbp, Elav-like ... 123 0.00012 1
CGD|CAL0001254 - symbol:orf19.1086 species:5476 "Candida ... 92 0.00017 3
UNIPROTKB|Q9Y4C8 - symbol:RBM19 "Probable RNA-binding pro... 125 0.00019 1
UNIPROTKB|K7EJD7 - symbol:CELF4 "CUGBP Elav-like family m... 112 0.00021 1
UNIPROTKB|F1NEC5 - symbol:RBM19 "Uncharacterized protein"... 116 0.00027 2
UNIPROTKB|B4E241 - symbol:SFRS3 "Splicing factor, arginin... 96 0.00035 1
UNIPROTKB|E2RJG5 - symbol:CELF6 "Uncharacterized protein"... 118 0.00038 1
ZFIN|ZDB-GENE-040718-300 - symbol:celf4 "CUGBP, Elav-like... 117 0.00066 1
UNIPROTKB|F1S8E8 - symbol:CELF5 "Uncharacterized protein"... 115 0.00080 1
UNIPROTKB|F1RKD1 - symbol:RBM19 "Uncharacterized protein"... 119 0.00089 1
MGI|MGI:1923433 - symbol:Celf6 "CUGBP, Elav-like family m... 115 0.00092 1
UNIPROTKB|F1PXQ8 - symbol:CELF5 "Uncharacterized protein"... 115 0.00099 1
UNIPROTKB|Q8N6W0 - symbol:CELF5 "CUGBP Elav-like family m... 115 0.00099 1
>TAIR|locus:2173567 [details] [associations]
symbol:AT5G60980 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0009737 "response to abscisic acid stimulus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AB008269 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
EMBL:AY062108 EMBL:BT003010 IPI:IPI00529722 RefSeq:NP_200906.2
UniGene:At.27353 ProteinModelPortal:Q9FME2 SMR:Q9FME2 IntAct:Q9FME2
STRING:Q9FME2 PRIDE:Q9FME2 EnsemblPlants:AT5G60980.2 GeneID:836219
KEGG:ath:AT5G60980 TAIR:At5g60980 HOGENOM:HOG000239086
InParanoid:Q9FME2 OMA:AQESHER PhylomeDB:Q9FME2
ProtClustDB:CLSN2680580 Genevestigator:Q9FME2 Uniprot:Q9FME2
Length = 460
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 209/361 (57%), Positives = 247/361 (68%)
Query: 1 MAVQEGSPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMK 60
MA QE SP+P A+VVG AFVEQYYHILHQSPGLVHRFYQDSS L+RPD G++TTVTTM+
Sbjct: 1 MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ 60
Query: 61 AINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK 120
AIND+ILSL YEDYTAEI+TADAQ+S+E+GVIVLVTG LTG DNV+KKF+Q+FFLAPQDK
Sbjct: 61 AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK 120
Query: 121 GGYFVLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEP---AHDQDHIPADRAIVI 177
G YFVLNDVFRF T PE +H+ + P A I
Sbjct: 121 G-YFVLNDVFRFLEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVAS-I 178
Query: 178 EGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYA 237
E EDLDN EV DPSDK+EG VV+ E +EPP+ NE+ + V QGDAP K SYA
Sbjct: 179 EEEDLDNVAEVYDPSDKDEGVVVDVEPIEPPTQISHNEILS------VPQGDAP-KHSYA 231
Query: 238 SIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVN 297
SI+K MK + + +V K RP P N +P A+PA PEASA + P +S+V+
Sbjct: 232 SILKQMKS-SPAPTTHVARNKPRPAPVNQKLTAPP-AEPAARPEASA--HENVPNSSHVD 287
Query: 298 EEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQ-GYCFGFVAFETPGSV 356
E +G SIYVRNL F +T T+LEE FK FG IK G+QVRSNKQ G+CFGFV FET
Sbjct: 288 VEDDGHSIYVRNLPFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSGK 347
Query: 357 Q 357
Q
Sbjct: 348 Q 348
>TAIR|locus:2152566 [details] [associations]
symbol:AT5G48650 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 EMBL:BT002864 EMBL:BT005640 IPI:IPI00523841
RefSeq:NP_199676.2 UniGene:At.29836 ProteinModelPortal:Q84JH2
SMR:Q84JH2 IntAct:Q84JH2 STRING:Q84JH2 PaxDb:Q84JH2 PRIDE:Q84JH2
EnsemblPlants:AT5G48650.1 GeneID:834922 KEGG:ath:AT5G48650
TAIR:At5g48650 eggNOG:NOG292401 InParanoid:Q84JH2 OMA:FNANIDM
PhylomeDB:Q84JH2 ProtClustDB:CLSN2918367 ArrayExpress:Q84JH2
Genevestigator:Q84JH2 Uniprot:Q84JH2
Length = 458
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 128/363 (35%), Positives = 178/363 (49%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
VG+AFV QYY+I P + RFYQ+ S + R +G M +T + I++ + L Y D
Sbjct: 16 VGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTFQGISEELKRLTYGDC 75
Query: 75 -TAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRFX 133
+AEI + D Q+S+ G ++ VTG T + ++KFTQTFFLAPQ+KG +FVLND+ RF
Sbjct: 76 NSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKG-FFVLNDILRFV 134
Query: 134 XXXX------XXXXXXXXXXXXTAPTA-NVTEAPEPAHDQDHIPADRAIVIEGEDLDNGP 186
T PT N + E A P + V + D +N
Sbjct: 135 NDDAKDNVPETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKE-VSKPLDNENAK 193
Query: 187 E-VCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMK- 244
+ V P E V EI V ++ + D DAP KKSYAS++KV K
Sbjct: 194 DNVLVPEIANE--VARTEIT---CKEVADDSQKNYDPDD-GLADAP-KKSYASVLKVTKD 246
Query: 245 -----GYNISSAAYVPARKAR--PTPPNA-----DQQSPAMAKPAPVPEASALS-SDGAP 291
++ S +P + P+ P+ DQ A + P+ V E+ +S S A
Sbjct: 247 KFGVPAVSLPSPKKIPKDQEHQAPSDPSTGQILKDQGQQASSDPSQVIESDTVSESVDAS 306
Query: 292 ENSNVNEEA--EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQ-GYCFGFV 348
EN + N+EA EG SIYVR+L F LE FK FG I G+QV + + GY +GFV
Sbjct: 307 ENGH-NQEAVAEGTSIYVRHLPFNANIDMLEAEFKQFGAITNGGIQVINQRGLGYPYGFV 365
Query: 349 AFE 351
FE
Sbjct: 366 EFE 368
>TAIR|locus:2023854 [details] [associations]
symbol:AT1G13730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009165 "nucleotide
biosynthetic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
GO:GO:0006810 EMBL:AC027656 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HSSP:P33331
HOGENOM:HOG000239086 EMBL:AY058169 EMBL:AY140039 EMBL:BT006581
IPI:IPI00531419 PIR:F86270 RefSeq:NP_563932.1 UniGene:At.15556
ProteinModelPortal:Q9LMX6 SMR:Q9LMX6 IntAct:Q9LMX6 STRING:Q9LMX6
PaxDb:Q9LMX6 PRIDE:Q9LMX6 EnsemblPlants:AT1G13730.1 GeneID:837933
KEGG:ath:AT1G13730 TAIR:At1g13730 eggNOG:NOG331084
InParanoid:Q9LMX6 OMA:DIAHEES PhylomeDB:Q9LMX6
ProtClustDB:CLSN2687795 ArrayExpress:Q9LMX6 Genevestigator:Q9LMX6
Uniprot:Q9LMX6
Length = 428
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 105/313 (33%), Positives = 152/313 (48%)
Query: 1 MAVQEGSPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMK 60
MA++ +P +GN+FVE+YY++L++SP VH+FY D S+L RP S+G M +V ++K
Sbjct: 1 MALESNAPVVDPNTIGNSFVEKYYNLLYKSPSQVHQFYLDDSVLGRPGSDGEMVSVKSLK 60
Query: 61 AINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK 120
AIN++I+S +YE +I TAD+Q SY GV+ LVTG LT K+ + +F+Q+FFL P +
Sbjct: 61 AINEQIMSFDYEISKIQILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLN- 119
Query: 121 GGYFVLNDVFRFXXXXXXXXXXXXXXXXXTAP-----TANVTEAPEPAHDQDHIPADRAI 175
G YFVLNDVFR+ P T V E EP P +
Sbjct: 120 GSYFVLNDVFRYVADEIVEPEANKKEVEEVIPQVVQPTEQVDEVAEPVTIPTQQPEAKQT 179
Query: 176 VIEGEDLDNGPE--VCDPSDK-EEGSVVEDEI--VEPPSNSVQNEVHASVDSAPVAQGDA 230
E+ PE V + K +E +VV D+ V+ P S + V + A
Sbjct: 180 T---ENTVKKPERAVANGHPKTQEDNVVNDKSNGVDAPKKSFAHIVQDLAQNGATFNAKA 236
Query: 231 -PEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDG 289
P K + K + A V + T DQQ A+ + A+ L D
Sbjct: 237 SPAKPKSKPVTKPSAARESKAPAPVSEHSSAAT---IDQQ----AEGYTIFVANLLM-DA 288
Query: 290 APENSNVNEEAEG 302
PE +NE +G
Sbjct: 289 TPEQ--LNETFKG 299
Score = 212 (79.7 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 69/194 (35%), Positives = 104/194 (53%)
Query: 175 IVIEGEDLDNGPE-VCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPV----AQG- 228
+V E +D E V P+ + E + V+ P +V N H V + G
Sbjct: 153 VVQPTEQVDEVAEPVTIPTQQPEAKQTTENTVKKPERAVANG-HPKTQEDNVVNDKSNGV 211
Query: 229 DAPEKKSYASIVK--VMKGYNISSAAYVPAR-KARP-TPPNADQQSPAMAKPAPVPEASA 284
DAP KKS+A IV+ G ++ A PA+ K++P T P+A ++S A PAPV E S+
Sbjct: 212 DAP-KKSFAHIVQDLAQNGATFNAKAS-PAKPKSKPVTKPSAARESKA---PAPVSEHSS 266
Query: 285 LSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNK-QGY 343
++ ++++AEG +I+V NL T +L E FK FG I K+G+QVRS + +G
Sbjct: 267 AAT--------IDQQAEGYTIFVANLLMDATPEQLNETFKGFGAITKDGIQVRSYRLKGN 318
Query: 344 CFGFVAFETPGSVQ 357
CFGFV F + +V+
Sbjct: 319 CFGFVTFASAEAVK 332
>TAIR|locus:2172472 [details] [associations]
symbol:AT5G43960 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 EMBL:AB006703 HOGENOM:HOG000239086 EMBL:AY080755
EMBL:AY114017 IPI:IPI00523493 RefSeq:NP_199209.1 UniGene:At.24860
ProteinModelPortal:Q9FND0 SMR:Q9FND0 IntAct:Q9FND0 STRING:Q9FND0
PaxDb:Q9FND0 PRIDE:Q9FND0 EnsemblPlants:AT5G43960.1 GeneID:834419
KEGG:ath:AT5G43960 TAIR:At5g43960 eggNOG:NOG295220
InParanoid:Q9FND0 OMA:INSVESW PhylomeDB:Q9FND0
ProtClustDB:CLSN2686872 ArrayExpress:Q9FND0 Genevestigator:Q9FND0
Uniprot:Q9FND0
Length = 450
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 98/302 (32%), Positives = 152/302 (50%)
Query: 7 SPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRI 66
+P P A VG+ FV QYY +L Q P L+H+FY + S R D + S T ++ I++ +
Sbjct: 3 TPYPGATQVGSYFVGQYYQVLQQQPDLIHQFYSEPSRAIRIDGD-STETANSLLHIHNMV 61
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKD-NVKKKFTQTFFLAPQDKGGYFV 125
+SLN+ E+KT ++ +S+E GV+V+V+G + K+ + ++ F QTFFLAPQ+KG YFV
Sbjct: 62 MSLNFT--AIEVKTINSVESWEGGVLVVVSGSVKTKEFSNRRSFVQTFFLAPQEKG-YFV 118
Query: 126 LNDVFRFXXXXXXXXX--XXXXXXXXTAPTANVTEAPEPAHDQDHI----PAD--RAIVI 177
L+DVF F A T P+P D++ +D A+ I
Sbjct: 119 LSDVFLFVDEGTVYYHQPSYLSEIKHEAQLNPPTRHPDP-QVSDYVLEEEASDYVNAVQI 177
Query: 178 EGEDLDNGPEVCDPSDKEEGSVVEDEIV--EPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
+ +DL + + + + + EDE+ E P V +V +APV + + K
Sbjct: 178 K-DDLVDKYSLQEDQHQPQHEDYEDEVAIEETPREEVAVDVVHEHRAAPVEEPVGEKSKM 236
Query: 235 SYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP-EN 293
SYASI+KV K AA VP +P+ + Q +P P L++ AP +
Sbjct: 237 SYASILKVAK-----EAATVPVAATQPSYNKSSQDINEWDQPMRTPSPQ-LAAPLAPIQQ 290
Query: 294 SN 295
SN
Sbjct: 291 SN 292
Score = 191 (72.3 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 65/173 (37%), Positives = 93/173 (53%)
Query: 201 EDEIV--EPPSNSVQNEVHASVDSAPVAQGDAPEKK-SYASIVKVMK-GYNISSAAYVPA 256
EDE+ E P V +V +APV + + K SYASI+KV K + AA P+
Sbjct: 200 EDEVAIEETPREEVAVDVVHEHRAAPVEEPVGEKSKMSYASILKVAKEAATVPVAATQPS 259
Query: 257 RKARPTPPNA-DQQ----SPAMAKP-APVPEASALS--SD-GAP-ENSNVNEEAEGCSIY 306
N DQ SP +A P AP+ ++++ + SD GA E+ + E+ E S+Y
Sbjct: 260 YNKSSQDINEWDQPMRTPSPQLAAPLAPIQQSNSSTYVSDYGAEAEDGSGFEDFEFKSVY 319
Query: 307 VRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQ--GYCFGFVAFETPGSVQ 357
VRNL +++E+EE FK FG IK +GV +R+ K G C+ FV FE SV+
Sbjct: 320 VRNLPSDISASEIEEEFKNFGTIKPDGVFLRTRKDVMGVCYAFVEFEDMTSVE 372
>TAIR|locus:2026423 [details] [associations]
symbol:AT1G69250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
EMBL:CP002684 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC008262 EMBL:AC018364
InterPro:IPR018222 PROSITE:PS50177 HOGENOM:HOG000239086
EMBL:BT006208 IPI:IPI00537284 PIR:E96716 RefSeq:NP_177085.1
UniGene:At.25325 ProteinModelPortal:Q9LDI9 SMR:Q9LDI9 STRING:Q9LDI9
PRIDE:Q9LDI9 EnsemblPlants:AT1G69250.1 GeneID:843256
KEGG:ath:AT1G69250 TAIR:At1g69250 InParanoid:Q9LDI9 OMA:PIKENGI
PhylomeDB:Q9LDI9 ProtClustDB:CLSN2682528 Genevestigator:Q9LDI9
Uniprot:Q9LDI9
Length = 427
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 84/277 (30%), Positives = 142/277 (51%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
PSAQ + FV QYYH+L Q P R Y D+S++SRPD G+M + T+++AIN ILS
Sbjct: 8 PSAQDIAAEFVRQYYHVLGQLPHEARRLYVDASVVSRPDVTGTMMSFTSVEAINKHILSC 67
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDV 129
++E+ E+ + D+Q+S E G+ ++V G +TGKDN ++KF+Q F+LA Q+ VLND+
Sbjct: 68 DFENTKFEVLSVDSQNSLEDGIFIMVIGFMTGKDNQRRKFSQMFYLARQNT--LVVLNDM 125
Query: 130 FRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVC 189
R+ P VTE PA D + ++ +++ + +
Sbjct: 126 LRYVDQEDSSTTET--------PCEPVTEIVRPA---DGLKKAEKTELKQKNVASVEKSV 174
Query: 190 DPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM-KG--- 245
+ + ++ + +++ ++ +V + D+AP G K+S+A IV M K
Sbjct: 175 NAAVEKNAAPLDNGKMKQSEKAVITQKVTEPDAAPQPDG---AKRSFADIVGSMAKNAAP 231
Query: 246 YNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEA 282
+ + S P +K P + + A KPA V ++
Sbjct: 232 FQVKSPVQAPVQK--PKYVGQPRAAAAPQKPAYVSKS 266
Score = 190 (71.9 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 72/216 (33%), Positives = 98/216 (45%)
Query: 154 ANVTEAP-EPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSV 212
++ TE P EP + PAD E +L V +K + VE P N
Sbjct: 134 SSTTETPCEPVTEIVR-PADGLKKAEKTELKQ-KNVASV-EKSVNAAVEKNAA-PLDNGK 189
Query: 213 QNEVHASVDSAPVAQGDA-PE----KKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
+ +V + V + DA P+ K+S+A IV G +AA + +P A
Sbjct: 190 MKQSEKAVITQKVTEPDAAPQPDGAKRSFADIV----GSMAKNAAPFQVK----SPVQAP 241
Query: 268 QQSPA-MAKP--APVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFK 324
Q P + +P A P+ A S +N E G SI+V NL +L E FK
Sbjct: 242 VQKPKYVGQPRAAAAPQKPAYVSKSIKKNDQKVIEVPGTSIFVANLPLNAMPPQLFELFK 301
Query: 325 IFGPIKKNGVQVRS---NKQGYCFGFVAFETPGSVQ 357
FGPIK+NG+QVRS N CFGF++FET SVQ
Sbjct: 302 DFGPIKENGIQVRSSRGNANPVCFGFISFETVASVQ 337
>TAIR|locus:2098555 [details] [associations]
symbol:AT3G07250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0009506 EMBL:CP002686 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
InterPro:IPR012463 Pfam:PF07897 InterPro:IPR018222 PROSITE:PS50177
IPI:IPI00518200 RefSeq:NP_187381.2 UniGene:At.53212
ProteinModelPortal:F4JED3 SMR:F4JED3 PRIDE:F4JED3
EnsemblPlants:AT3G07250.1 GeneID:819913 KEGG:ath:AT3G07250
Uniprot:F4JED3
Length = 1294
Score = 213 (80.0 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 47/118 (39%), Positives = 71/118 (60%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
VG+ F QYY+ L +P +++ Y+D S +SRP +G+M T K + R S D
Sbjct: 281 VGDEFARQYYNTLQNAPENLYKLYKDKSTISRPGLDGTMRVFTLSKDLKWR--SPGSFD- 337
Query: 75 TAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
+ +I + +QDS ++G++V+V G LT + + FTQ FFL PQ+KG Y V D+FRF
Sbjct: 338 SVKITSVTSQDSLKQGILVVVYGYLTFNERPARHFTQVFFLVPQEKG-YIVCTDMFRF 394
Score = 187 (70.9 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 44/115 (38%), Positives = 67/115 (58%)
Query: 19 FVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDR-ILSLNYEDYTAE 77
F E YY+ L SP ++ +Y+D S ++RP +G+M + T I D +LS D + E
Sbjct: 948 FSEHYYNNLQNSPEILPGYYKDVSKITRPGLDGTMRSSTLPDIIEDLDMLSPGGFD-SVE 1006
Query: 78 IKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
+ + +QDS++KG+ V V G T + + FTQ F APQ+KG FV D+F+F
Sbjct: 1007 VTSVMSQDSHDKGIRVAVDGYFTFNERPARNFTQNFTFAPQEKG-LFVSTDMFKF 1060
Score = 132 (51.5 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 49/182 (26%), Positives = 77/182 (42%)
Query: 181 DLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIV 240
+L N PE+ K+ + + +S ++ +D D+ E S S
Sbjct: 955 NLQNSPEILPGYYKDVSKITRPGLDGTMRSSTLPDIIEDLDMLSPGGFDSVEVTSVMSQD 1014
Query: 241 KVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSD-----GAPENSN 295
KG ++ Y + RP N Q AP + +S+D G PE +
Sbjct: 1015 SHDKGIRVAVDGYFTFNE-RPAR-NFTQNFTF----APQEKGLFVSTDMFKFVGIPEANA 1068
Query: 296 VNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGS 355
A +I V+NL T +E AFK FG I++ GV+VR NK+ + +GFV F+ +
Sbjct: 1069 TIPPANNAAICVKNLPLNATIALVENAFKQFGEIRRGGVEVR-NKRSFSYGFVEFKEENA 1127
Query: 356 VQ 357
Q
Sbjct: 1128 AQ 1129
Score = 109 (43.4 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 289 GAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFV 348
G EN N A +++V+NL T+ +E AFK FGPIK+ GVQV + G FG V
Sbjct: 1183 GGNEN-NQEPRALYAAVHVKNLPPNVTTDWVENAFKQFGPIKRGGVQVSNRGVGNWFGNV 1241
Query: 349 AF 350
F
Sbjct: 1242 KF 1243
Score = 91 (37.1 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 37/122 (30%), Positives = 57/122 (46%)
Query: 239 IVKVMKGYNISSAAY--VPARKARPTPPNADQQSPAMAKPAPVPEASALS-SDGAPENSN 295
+V KGY + + + V +A P A+ + + P E +AL S+ N
Sbjct: 378 LVPQEKGYIVCTDMFRFVDIPEANAAIPPAND---VIEEKVPETEGAALRVSEPNHGFDN 434
Query: 296 VNE---EAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFG---FVA 349
V + +EG +I + L T +E AFK FG I++ GV+VR N +C G +V
Sbjct: 435 VPKLSCASEGAAICAKKLPLDATIAFVENAFKQFGEIRRGGVEVRIN--WHCTGKYAYVE 492
Query: 350 FE 351
FE
Sbjct: 493 FE 494
Score = 87 (35.7 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 281 EASALSSDGAPENSN-VNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RS 338
+A A + +G ++S + E+A I V++L T +E FK FGPIKK ++V
Sbjct: 530 DAGADTGNGNSQDSQAITEDAH---IRVKDLPPNATVALVESVFKQFGPIKKGRIRVINP 586
Query: 339 NKQGYCFGFVAFE 351
Y + FV FE
Sbjct: 587 ANSNYWYAFVEFE 599
Score = 78 (32.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 299 EAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFE 351
E+ S++++ L T +E+A K FGPI N + + + Y F FV FE
Sbjct: 741 ESHEASVFLKRLPLDVTFALIEDALKKFGPI--NAISIIKSGPLYKFAFVDFE 791
>ZFIN|ZDB-GENE-030131-7452 [details] [associations]
symbol:g3bp1 "GTPase activating protein (SH3
domain) binding protein 1" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030131-7452
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HSSP:P09651
CTD:10146 HOVERGEN:HBG007211 EMBL:BC045874 IPI:IPI00501560
RefSeq:NP_956250.1 UniGene:Dr.7036 ProteinModelPortal:Q7ZVG3
STRING:Q7ZVG3 GeneID:335512 KEGG:dre:335512 NextBio:20810882
ArrayExpress:Q7ZVG3 Uniprot:Q7ZVG3
Length = 477
Score = 217 (81.4 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 49/128 (38%), Positives = 77/128 (60%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PSAQ+VG FV QYY +L+Q+P +HRFY ++SS + D+NG V I+ ++
Sbjct: 6 PSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPAEAVYGQSEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
++L++ D +I+ DA + +GV+V V G L+ +KF QTF LAP+ ++
Sbjct: 66 MALSFRDCHTKIRHVDAHATLNEGVVVQVLGGLSNNMQPMRKFMQTFVLAPEGTVANKFY 125
Query: 125 VLNDVFRF 132
V ND+FR+
Sbjct: 126 VHNDIFRY 133
Score = 91 (37.1 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 49/213 (23%), Positives = 80/213 (37%)
Query: 155 NVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEP-PSNSVQ 213
+VT P+P + + P A+ ++ E + PEV +K + S + P+
Sbjct: 189 SVTPEPQPEPEVEVEPEPAAVELKAEPISQ-PEV-HVEEKTQRSPPSPTPADTAPTMPED 246
Query: 214 NEVH--ASVDSAPVAQGDA-PEKKSYASIVKVMKGY---NISSAAYVPA-RKARPTPPNA 266
N ASV S + G P +V+V + + A R R P
Sbjct: 247 NRPSSWASVTSKNLPPGGVVPATGVPPHVVRVPSAQPRVEVKTETQTTAQRPQRDQRPRD 306
Query: 267 DQQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIF 326
+ P+ A P P G E + ++V N+ EL+E F+ +
Sbjct: 307 QRPGPSPAHRTPRPGVVREGESGESEVRRTVRYPDSHQLFVGNVPHDVDKNELKEFFEQY 366
Query: 327 GPIKKNGVQVRSNKQGYC--FGFVAFETPGSVQ 357
G + +++R N G FGFV F+ VQ
Sbjct: 367 GTV----LELRINSGGKLPNFGFVVFDDSEPVQ 395
Score = 44 (20.5 bits), Expect = 6.4e-16, Sum P(2) = 6.4e-16
Identities = 27/110 (24%), Positives = 40/110 (36%)
Query: 196 EGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAP-EKKSYASIVKVMKGYNISSAAYV 254
EG+V V Q+EV DS P + + E+ +V++ SS Y
Sbjct: 117 EGTVANKFYVHNDIFRYQDEVFGDSDSEPPEESEEDVEELERVHSPEVVQ--EESSGYYE 174
Query: 255 PARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCS 304
P P ++ +P P PE PE + V +AE S
Sbjct: 175 QTPCVEPEVPQ--EEVSVTPEPQPEPEVEV-----EPEPAAVELKAEPIS 217
>UNIPROTKB|E1C769 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:AADN02008996
IPI:IPI00597302 RefSeq:XP_420536.2 UniGene:Gga.10005
ProteinModelPortal:E1C769 Ensembl:ENSGALT00000017688 GeneID:422576
KEGG:gga:422576 NextBio:20825190 Uniprot:E1C769
Length = 482
Score = 224 (83.9 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 77/301 (25%), Positives = 131/301 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDASGKPQEAVYGQAEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+SL + + +I+ DA + GV+V V G L+ +KF QTF LAP+ ++
Sbjct: 66 MSLQFSECHTKIRHVDAHATLSDGVVVQVMGELSNNGQPMRKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQ------DHIPADRAI 175
V ND+FR+ E +PEP + ++ P I
Sbjct: 126 VHNDIFRYEDEVFGDSEGELDEESEEEVEEEQEERQPSPEPVQENASSTYYENHPVTNGI 185
Query: 176 --VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEK 233
+E + PE+ + EE ++ E+ E ++ + + PV+ P K
Sbjct: 186 EEALEESSHEPEPELESETKPEE---LKTEVEEKALEELEEKSPSPPPVEPVSLPQEPPK 242
Query: 234 K-SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGA 290
S+AS+ + +SS+ P KA + P + + A ++P V E G
Sbjct: 243 AFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVETKPEAQSQPPRVREQRPRERPGF 302
Query: 291 P 291
P
Sbjct: 303 P 303
Score = 78 (32.5 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 30/109 (27%), Positives = 45/109 (41%)
Query: 258 KARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA----EGCSIYVRNLAFT 313
+A+ PP +Q P +P P +N + N + ++V NL
Sbjct: 283 EAQSQPPRVREQRPR-ERPGFPPRGPRPGRGDVEQNESDNRRIIRYPDSHQLFVGNLPHD 341
Query: 314 TTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAFETPGSVQ 357
+EL+E F FG N V++R N +G FGFV F+ VQ
Sbjct: 342 IDESELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVFDDSEPVQ 386
>UNIPROTKB|E2QYY6 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 CTD:9908
RefSeq:XP_855995.1 ProteinModelPortal:E2QYY6
Ensembl:ENSCAFT00000013317 GeneID:478429 KEGG:cfa:478429
NextBio:20853768 Uniprot:E2QYY6
Length = 449
Score = 251 (93.4 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 104/368 (28%), Positives = 162/368 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEA-PEPAHDQDHIPADRAIVIEGEDLD 183
V ND+FR+ E P P Q++ AD E +
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQEN--ADSGYY-EAHPVA 182
Query: 184 NGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM 243
NG E +P EE S E E EP S + E+ V+ + + E+KS +
Sbjct: 183 NGIE--EPL--EESSH-EPE-PEPDSETKTEELKPQVEEKNLEE---LEEKSTSP--PPA 231
Query: 244 KGYNISSAAYVPARKARPT----PPNADQQSPAMAKPA-----PVPEASALSSDGAPENS 294
+ ++ P +A+P PP +Q P +P P P L + + +N
Sbjct: 232 EPVSLPQEPPKPRVEAKPEVQSQPPRVREQRPR-ERPGFPPRGPRPGRGDLEQNES-DNR 289
Query: 295 NVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVA 349
+ + ++V NL EL+E F FG N V++R N +G FGFV
Sbjct: 290 RIIRYPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVV 345
Query: 350 FETPGSVQ 357
F+ VQ
Sbjct: 346 FDDSEPVQ 353
>POMBASE|SPBP8B7.11 [details] [associations]
symbol:nxt3 "ubiquitin protease cofactor Glp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0016579 "protein deubiquitination"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0060628 "regulation of ER to Golgi vesicle-mediated transport"
evidence=ISO] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
PomBase:SPBP8B7.11 GO:GO:0005829 GO:GO:0000166 EMBL:CU329671
Gene3D:3.30.70.330 GenomeReviews:CU329671_GR GO:GO:0003723
GO:GO:0051028 GO:GO:0060628 GO:GO:0016579 OrthoDB:EOG4N33ZJ
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333 PIR:T40805
RefSeq:NP_596518.1 ProteinModelPortal:O94260 IntAct:O94260
STRING:O94260 PRIDE:O94260 EnsemblFungi:SPBP8B7.11.1 GeneID:2541364
KEGG:spo:SPBP8B7.11 OMA:ATENNFA NextBio:20802473 Uniprot:O94260
Length = 434
Score = 248 (92.4 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 89/339 (26%), Positives = 140/339 (41%)
Query: 8 PAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRIL 67
P +G FV++YY L++ P +H FY S L D S++ + I+++IL
Sbjct: 11 PVLGKDEIGWMFVQEYYTYLNKEPNRLHCFYTKKSTLIHGDEGESISLCHGQQEIHNKIL 70
Query: 68 SLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLN 127
L++++ I D+ S G+++ V G ++ K + +KF QTFFLA Q G YFVLN
Sbjct: 71 DLDFQNCKVLISNVDSLASSNGGIVIQVLGEMSNKGKLSRKFAQTFFLAEQPNG-YFVLN 129
Query: 128 DVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEG--ED---L 182
D+FRF Q+H+P+ + EG +D
Sbjct: 130 DIFRFLREDVEEEEESPDAVEKEKKDVASEPYVNGVQSQEHLPSAKE---EGHYQDPAAT 186
Query: 183 DNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKV 242
+N E S+ + + P +Q ASV S Q + + ++ S K
Sbjct: 187 ENNFATAALISNETDSLNQATLAVPEEPVIQ-VTEASVPSFVSQQENQLQDEALTSNSKN 245
Query: 243 MKGYNISSAAYVPARK------ARPTPPNADQQSPAMAKPAPVPEASALSSDG-----AP 291
S A A K AR P Q S + +++D AP
Sbjct: 246 ADAIGASDANVATAPKSWADLIARNHPDVKSQASVSSTASTTGQTVKGVNADQTQQPTAP 305
Query: 292 ENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIK 330
+ NE E S++V+N+ T+ L+ A IFGP+K
Sbjct: 306 YTQS-NELLE-TSVFVKNIPPETSDVSLKSAMSIFGPVK 342
>UNIPROTKB|Q2KJ17 [details] [associations]
symbol:G3BP2 "GTPase activating protein (SH3 domain)
binding protein 2" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0000166
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 OMA:MEQNESD
EMBL:DAAA02018118 EMBL:BC105567 IPI:IPI00708814
RefSeq:NP_001039920.1 UniGene:Bt.87528 STRING:Q2KJ17
Ensembl:ENSBTAT00000018663 GeneID:539249 KEGG:bta:539249
NextBio:20877877 Uniprot:Q2KJ17
Length = 449
Score = 248 (92.4 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 100/367 (27%), Positives = 157/367 (42%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEA-PEPAHDQDHIPADRAIVIEGEDLD 183
V ND+FR+ E P P Q++ + E +
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENANSG---YYEAHPVT 182
Query: 184 NGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM 243
NG E +P EE S E E EP S + E+ PV + + E + ++
Sbjct: 183 NGIE--EPL--EESSH-EPE-PEPESETKTEEL-----KPPVEEKNLEELEEKSASPPPA 231
Query: 244 KGYNISSAAYVPARKARPT----PPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEE 299
+ ++ P +A+P PP +Q P +P P +N + N
Sbjct: 232 EPVSLPQEPPKPRVEAKPEVQSQPPRVREQRPR-ERPGFPPRGPRPGRGDIEQNESDNRR 290
Query: 300 A----EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAF 350
+ ++V NL EL+E F FG N V++R N +G FGFV F
Sbjct: 291 IIRYPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVF 346
Query: 351 ETPGSVQ 357
+ VQ
Sbjct: 347 DDSEPVQ 353
>ZFIN|ZDB-GENE-040426-2698 [details] [associations]
symbol:zgc:56304 "zgc:56304" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040426-2698 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 EMBL:BC097071 IPI:IPI00772318
UniGene:Dr.31694 ProteinModelPortal:Q4V942 STRING:Q4V942
InParanoid:Q4V942 ArrayExpress:Q4V942 Uniprot:Q4V942
Length = 501
Score = 229 (85.7 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 84/290 (28%), Positives = 133/290 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMTTVTTMKA-INDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + DSNG +A I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPDYLHRFYGRNSSYVHGGLDSNGKPEEAVYGQAEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKG--GYF 124
+SL + + +I+ DA + GV+V V G L+ ++F QTF LAP+ ++
Sbjct: 66 MSLQFSECHTKIRHVDAHATLGDGVVVQVMGELSNSGRPMRRFMQTFVLAPEGSAVNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQDHIPADRAIVIEGED 181
V ND+FR+ E +PEPA D+ P+
Sbjct: 126 VHNDIFRYEEEVFGDSEAELGESEEEEVEEEPVETHASPEPAQDR---PSSTTYYEPPPP 182
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQN-EVHASVDSA-PVAQGDAPEKKSYASI 239
+ NG E +E VE E VEP + + Q E S ++ VA+ + PE++ +
Sbjct: 183 VSNGVE---EQQEEAVPEVEPE-VEPEALASQEPEAELSTEAELQVAEAE-PEEEE--KL 235
Query: 240 VKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDG 289
+ +G + A P + P PP A S A+ +P A AL + G
Sbjct: 236 PEEERG-STPGLALTPPPQT-PEPPKAF--SWALVTSKNLPPAGALPASG 281
Score = 60 (26.2 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 305 IYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAFETPGSVQ 357
++V NL EL++ F FG N V++R N +G FGFV F+ VQ
Sbjct: 365 LFVGNLPHDIDEGELKDFFMTFG----NVVEMRINTKGVGGKLPNFGFVVFDDSDPVQ 418
>UNIPROTKB|I3LPH5 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 CTD:9908 OMA:MEQNESD EMBL:CU467763
RefSeq:XP_003357027.1 Ensembl:ENSSSCT00000026131 GeneID:100621975
KEGG:ssc:100621975 Uniprot:I3LPH5
Length = 448
Score = 244 (91.0 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 94/367 (25%), Positives = 157/367 (42%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQD------HIPADRAI 175
V ND+FR+ E PEP + + H P I
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPTPEPVQETNSGYYEAH-PVTNGI 184
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKS 235
E+ + PE +P + + ++ ++ E ++ + + + PV+ P K
Sbjct: 185 EEPLEESSHEPEP-EPESETKTEELKPQVEEKNLEELEEKSTSPPPAEPVSLPQEPPKPR 243
Query: 236 YASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSN 295
+ +V S V R+ RP ++ P P P + + + +N
Sbjct: 244 VETKPEVQ-----SQPPRV--REQRP------RERPGFPPRGPRPGRGDIEQNES-DNRR 289
Query: 296 VNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAF 350
+ + ++V NL EL+E F FG N V++R N +G FGFV F
Sbjct: 290 IIRYPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVF 345
Query: 351 ETPGSVQ 357
+ VQ
Sbjct: 346 DDSEPVQ 352
>FB|FBgn0015778 [details] [associations]
symbol:rin "rasputin" species:7227 "Drosophila melanogaster"
[GO:0017124 "SH3 domain binding" evidence=ISS] [GO:0001752
"compound eye photoreceptor fate commitment" evidence=IMP]
[GO:0007265 "Ras protein signal transduction" evidence=IGI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016318 "ommatidial
rotation" evidence=IMP] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005829 GO:GO:0007265 GO:GO:0000166
GO:GO:0005811 GO:GO:0006810 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0001752
InterPro:IPR018222 PROSITE:PS50177 GO:GO:0016318 eggNOG:NOG324333
HSSP:P33331 EMBL:AF231031 ProteinModelPortal:Q9NH72 SMR:Q9NH72
IntAct:Q9NH72 STRING:Q9NH72 PaxDb:Q9NH72 PRIDE:Q9NH72
FlyBase:FBgn0015778 InParanoid:Q9NH72 OrthoDB:EOG42RBPK
ArrayExpress:Q9NH72 Bgee:Q9NH72 Uniprot:Q9NH72
Length = 690
Score = 232 (86.7 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 52/126 (41%), Positives = 72/126 (57%)
Query: 7 SPAPSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRI 66
S PS Q VG FV QYY +L+++P +HRFY +S +G V + I++RI
Sbjct: 8 SQQPSPQSVGREFVRQYYTLLNKAPNHLHRFYNHNSSYI----HGESKLVVGQREIHNRI 63
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVL 126
LN+ D A+I DAQ + GV+V VTG L+ ++FTQTF LA Q Y+V
Sbjct: 64 QQLNFNDCHAKISQVDAQATLGNGVVVQVTGELSNDGQPMRRFTQTFVLAAQSPKKYYVH 123
Query: 127 NDVFRF 132
ND+FR+
Sbjct: 124 NDIFRY 129
Score = 57 (25.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 276 PAPVPEASALSSDGAPE---NSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPI--- 329
P P S ++ G E +SN + + +++ N+ + +L E F FG +
Sbjct: 463 PLPQRNNSIRNNKGDFEQRRSSNTQQFGDNQQLFLGNIPHHASEDDLREIFSRFGNVLEL 522
Query: 330 ---KKNGVQVRSNKQGYC-FGFVAFETPGSVQ 357
K G +V + +GF+ ++ P +VQ
Sbjct: 523 RILSKAGNKVPPGMRSPLNYGFITYDDPEAVQ 554
>RGD|1309571 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 RGD:1309571 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 CTD:9908 EMBL:CH474060
EMBL:BC079225 IPI:IPI00464529 RefSeq:NP_001014011.1
UniGene:Rn.198360 MINT:MINT-7138399 STRING:Q6AY21
Ensembl:ENSRNOT00000003346 GeneID:305240 KEGG:rno:305240
UCSC:RGD:1309571 NextBio:654241 Genevestigator:Q6AY21
Uniprot:Q6AY21
Length = 449
Score = 242 (90.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 99/364 (27%), Positives = 155/364 (42%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXX-XXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGEDLD 183
V ND+FR+ P P Q++ A+ A E +
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEDRQPSPEPVQEN--ANSAYY-EAHPVT 182
Query: 184 NGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVM 243
NG E +P EE S E E EP S + E+ + + + + EK + +
Sbjct: 183 NGIE--EPL--EESSH-EPE-PEPESETKTEELKPQAEEKHLEELE--EKSATPPPTEPA 234
Query: 244 KGYNISSAAYVPAR-KARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEA-- 300
V A+ + + PP +Q P +P P +N + N
Sbjct: 235 SLPQEPPKPRVDAKPEVQSQPPRVREQRPR-ERPGFPPRGPRPGRGDTEQNDSDNRRIIR 293
Query: 301 --EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC-----FGFVAFETP 353
+ ++V NL EL+E F FG N V++R N +G FGFV F+
Sbjct: 294 YPDSHQLFVGNLPHDIDENELKEFFMSFG----NVVELRINTKGVGGKLPNFGFVVFDDS 349
Query: 354 GSVQ 357
VQ
Sbjct: 350 EPVQ 353
>MGI|MGI:2442040 [details] [associations]
symbol:G3bp2 "GTPase activating protein (SH3 domain) binding
protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360 EMBL:U65313
MGI:MGI:2442040 GO:GO:0005737 GO:GO:0007264 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0051028 InterPro:IPR018222
PROSITE:PS50177 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 CTD:9908 OMA:MEQNESD
EMBL:AF145285 EMBL:AK145697 IPI:IPI00124245 IPI:IPI00331295
RefSeq:NP_001074263.1 RefSeq:NP_001074266.1 RefSeq:NP_035946.2
UniGene:Mm.290530 UniGene:Mm.473827 ProteinModelPortal:P97379
SMR:P97379 STRING:P97379 PhosphoSite:P97379 PaxDb:P97379
PRIDE:P97379 Ensembl:ENSMUST00000113127 Ensembl:ENSMUST00000164378
Ensembl:ENSMUST00000167918 Ensembl:ENSMUST00000169094 GeneID:23881
KEGG:mmu:23881 InParanoid:P97379 ChiTaRS:G3BP2 NextBio:303611
Bgee:P97379 Genevestigator:P97379 GermOnline:ENSMUSG00000029405
Uniprot:P97379
Length = 482
Score = 233 (87.1 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 76/299 (25%), Positives = 130/299 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQ------DHIPADRAI 175
V ND+FR+ + +PEP + D P I
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEDRQPSPEPVQENANSAYYDAHPVTNGI 185
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
E+ + PE +P + + ++ ++ E ++ + + P + P K
Sbjct: 186 EEPLEESSHEPEP-EPESETKTEELKPQVEEKHLEELEEKSATPPPAEPASLPQEPPKAF 244
Query: 235 SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
S+AS+ + +SS+ P KA + P D + ++P V E G P
Sbjct: 245 SWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVDAKPEVQSQPPRVREQRPRERPGFP 303
>UNIPROTKB|Q9UN86 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003723 "RNA binding"
evidence=NAS] [GO:0007265 "Ras protein signal transduction"
evidence=NAS] [GO:0007253 "cytoplasmic sequestering of NF-kappaB"
evidence=NAS] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=NAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=TAS] [GO:0051056 "regulation of small GTPase mediated
signal transduction" evidence=TAS] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 GO:GO:0005829 Reactome:REACT_111102
GO:GO:0007265 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0051056
GO:GO:0003723 EMBL:CH471057 GO:GO:0030159 GO:GO:0051028
InterPro:IPR018222 PROSITE:PS50177 GO:GO:0007253 eggNOG:NOG324333
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AF145284 EMBL:AB014560 EMBL:AF051311 EMBL:AF053535
EMBL:AK291786 EMBL:BC011731 IPI:IPI00009057 IPI:IPI00179890
RefSeq:NP_036429.2 RefSeq:NP_987100.1 RefSeq:NP_987101.1
UniGene:Hs.303676 ProteinModelPortal:Q9UN86 SMR:Q9UN86
IntAct:Q9UN86 MINT:MINT-3082700 STRING:Q9UN86 PhosphoSite:Q9UN86
DMDM:116242482 PaxDb:Q9UN86 PRIDE:Q9UN86 Ensembl:ENST00000357854
Ensembl:ENST00000359707 Ensembl:ENST00000395719 GeneID:9908
KEGG:hsa:9908 UCSC:uc003hir.3 UCSC:uc003hit.3 CTD:9908
GeneCards:GC04M076567 HGNC:HGNC:30291 HPA:HPA018304 HPA:HPA018425
neXtProt:NX_Q9UN86 PharmGKB:PA162389134 InParanoid:Q9UN86
OMA:MEQNESD PhylomeDB:Q9UN86 GenomeRNAi:9908 NextBio:37365
ArrayExpress:Q9UN86 Bgee:Q9UN86 CleanEx:HS_G3BP2
Genevestigator:Q9UN86 GermOnline:ENSG00000138757 Uniprot:Q9UN86
Length = 482
Score = 232 (86.7 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 76/299 (25%), Positives = 131/299 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQDHI------PADRAI 175
V ND+FR+ E +PEP + + P I
Sbjct: 126 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENANSGYYEAHPVTNGI 185
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
E+ + PE +P + + ++ ++ E ++ + + PV+ P K
Sbjct: 186 EEPLEESSHEPEP-EPESETKTEELKPQVEEKNLEELEEKSTTPPPAEPVSLPQEPPKAF 244
Query: 235 SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
S+AS+ + +SS+ P KA + P + + ++P V E G P
Sbjct: 245 SWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFP 303
>UNIPROTKB|F6XCI1 [details] [associations]
symbol:G3BP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:MEQNESD Ensembl:ENSCAFT00000013317
EMBL:AAEX03016672 EMBL:AAEX03016673 Uniprot:F6XCI1
Length = 490
Score = 232 (86.7 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 76/299 (25%), Positives = 132/299 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 14 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 73
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 74 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 133
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTE---APEPAHDQ------DHIPADRAI 175
V ND+FR+ E +PEP + + P I
Sbjct: 134 VHNDMFRYEDEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENADSGYYEAHPVANGI 193
Query: 176 VIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEKK- 234
E+ + PE +P + + ++ ++ E ++ + + + PV+ P K
Sbjct: 194 EEPLEESSHEPEP-EPDSETKTEELKPQVEEKNLEELEEKSTSPPPAEPVSLPQEPPKAF 252
Query: 235 SYASIVK--VMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
S+AS+ + +SS+ P KA + P + + ++P V E G P
Sbjct: 253 SWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFP 311
>ASPGD|ASPL0000013038 [details] [associations]
symbol:AN8268 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 EMBL:BN001302 OMA:YPIYIRG InterPro:IPR018222
PROSITE:PS50177 EMBL:AACD01000145 eggNOG:NOG324333
RefSeq:XP_681537.1 ProteinModelPortal:Q5ATW2
EnsemblFungi:CADANIAT00004328 GeneID:2868982 KEGG:ani:AN8268.2
HOGENOM:HOG000159527 OrthoDB:EOG4RR9T6 Uniprot:Q5ATW2
Length = 526
Score = 230 (86.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 84/292 (28%), Positives = 126/292 (43%)
Query: 11 SAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLN 70
S VG FVEQYY + +SP +H FY S L S+ KAI ++ L+
Sbjct: 56 SKDEVGWYFVEQYYTNMSRSPDKLHLFYSRRSQLVFGTEAESVPVAVGQKAIQEKFKQLD 115
Query: 71 YEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVF 130
++D + DAQ S+E +++ V G ++ K +KF QTF LA Q G Y+VLNDVF
Sbjct: 116 FQDCKVRVLNVDAQASFEN-ILISVIGEISNKQEPSRKFVQTFVLAEQPNG-YYVLNDVF 173
Query: 131 RFXXXXXXXXXXXXXXXXXT------AP--TAN--VTEAPEPAHDQDHIPADRAIVIE-G 179
R+ AP TA +TE E D + A +E
Sbjct: 174 RYLVDEEEVAEDAAISSDTVEEPELQAPAQTAAGPITETEESKVDTEEAAAKIDEKLEKA 233
Query: 180 EDLDNGPEVCDPSDKEEGSVVED---EIVEPPSNSVQ--NEVHASVDS--APVAQGDAPE 232
E+ ++ + + + G+ + E+VE P+ + + E AS + AP A+ +AP
Sbjct: 234 EEAESEAPAAETAPQTNGTEQPEPAAEVVETPAPAAEVVPEKPASPEPSPAPPAEKEAPT 293
Query: 233 KKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASA 284
K+ V K + ++ A P P A + A PA P A A
Sbjct: 294 KEPAPPAKAVPKTWASIASKTGAAAPVVPAIPVAPVKPAPAAAPASQPAAPA 345
>MGI|MGI:1351465 [details] [associations]
symbol:G3bp1 "GTPase activating protein (SH3 domain) binding
protein 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IMP] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1351465 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006810 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0090305
GO:GO:0004386 GO:GO:0090090 GO:GO:0004519 GO:GO:0010494
InterPro:IPR018222 PROSITE:PS50177 CTD:10146 eggNOG:NOG324333
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 ChiTaRS:G3BP1
EMBL:AB001927 EMBL:BC021156 IPI:IPI00130095 RefSeq:NP_038744.1
UniGene:Mm.380129 UniGene:Mm.39631 UniGene:Mm.405739
ProteinModelPortal:P97855 SMR:P97855 STRING:P97855
PhosphoSite:P97855 PaxDb:P97855 PRIDE:P97855
Ensembl:ENSMUST00000018727 GeneID:27041 KEGG:mmu:27041
InParanoid:P97855 NextBio:304965 Bgee:P97855 Genevestigator:P97855
GermOnline:ENSMUSG00000018583 Uniprot:P97855
Length = 465
Score = 228 (85.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 81/308 (26%), Positives = 139/308 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRP--DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY +S + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYAHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIE---GED 181
V ND+FR+ V E E + +P D + D
Sbjct: 126 VHNDIFRYQDEVFGGFVTEPQEESEE----EVEEPEERQQTPEVVPDDSGTFYDQTVSND 181
Query: 182 LDNGPE--VCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVD-SAP--VAQGDAPEKKSY 236
L+ E V +P + E E E EP S+ +++ A+++ +AP V + +P
Sbjct: 182 LEEHLEEPVVEPEPEPEP---EPE-PEPVSDIQEDKPEAALEEAAPDDVQKSTSPAPADV 237
Query: 237 ASIVKVMKGYNISSAAY--VPARKARP---TPPNADQQSPAMAKPAPVPEASALSSDGAP 291
A + ++ ++ +S +P A P TPP+ + + +P P+ S +
Sbjct: 238 APAQEDLRTFSWASVTSKNLPPSGAVPVTGTPPHVVKVPASQPRPESKPD-SQIPPQRPQ 296
Query: 292 ENSNVNEE 299
+ V E+
Sbjct: 297 RDQRVREQ 304
>UNIPROTKB|Q13283 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007265 "Ras
protein signal transduction" evidence=TAS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 EMBL:U32519 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0007265 GO:GO:0003677
GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0004003
GO:GO:0090305 GO:GO:0004519 InterPro:IPR018222 PROSITE:PS50177
GO:GO:0004004 CTD:10146 eggNOG:NOG324333 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OMA:VVSNDME OrthoDB:EOG4XWFZ0 EMBL:BC006997
IPI:IPI00012442 RefSeq:NP_005745.1 RefSeq:NP_938405.1
UniGene:Hs.587054 PDB:3Q90 PDBsum:3Q90 ProteinModelPortal:Q13283
SMR:Q13283 IntAct:Q13283 MINT:MINT-5002789 STRING:Q13283
PhosphoSite:Q13283 DMDM:14916572 PaxDb:Q13283 PeptideAtlas:Q13283
PRIDE:Q13283 DNASU:10146 Ensembl:ENST00000356245
Ensembl:ENST00000394123 GeneID:10146 KEGG:hsa:10146 UCSC:uc003lum.3
GeneCards:GC05P151151 HGNC:HGNC:30292 HPA:HPA004052 MIM:608431
neXtProt:NX_Q13283 PharmGKB:PA162389105 InParanoid:Q13283
PhylomeDB:Q13283 ChiTaRS:G3BP1 GenomeRNAi:10146 NextBio:38391
ArrayExpress:Q13283 Bgee:Q13283 CleanEx:HS_G3BP1
Genevestigator:Q13283 GermOnline:ENSG00000145907 Uniprot:Q13283
Length = 466
Score = 227 (85.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 82/308 (26%), Positives = 136/308 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXX--XXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEG--E 180
V ND+FR+ + PE D D+A+V E
Sbjct: 126 VHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQAVVSNDMEE 185
Query: 181 DLDNG---PEVCDPS---DKEEGSVVEDEIVEPP-SNSVQNEVHASVDSAP--VAQGDAP 231
L+ PE DP ++E S +++E EP + + S AP +AQ
Sbjct: 186 HLEEPVAEPEP-DPEPEPEQEPVSEIQEEKPEPVLEETAPEDAQKSSSPAPADIAQTVQE 244
Query: 232 EKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
+ ++++ K N+ + VP PP+ + + +P PE S +
Sbjct: 245 DLRTFSWASVTSK--NLPPSGAVPVTGI---PPHVVKVPASQPRPESKPE-SQIPPQRPQ 298
Query: 292 ENSNVNEE 299
+ V E+
Sbjct: 299 RDQRVREQ 306
>UNIPROTKB|F1RQB6 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:CU570659
Ensembl:ENSSSCT00000018595 Uniprot:F1RQB6
Length = 464
Score = 226 (84.6 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 82/309 (26%), Positives = 138/309 (44%)
Query: 9 APSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDR 65
+PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ +
Sbjct: 4 SPSXLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRK 63
Query: 66 ILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGY 123
+++ N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ +
Sbjct: 64 VMAQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKF 123
Query: 124 FVLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIE---GE 180
+V ND+FR+ V E E + +P D +
Sbjct: 124 YVHNDIFRYQDEVFGGFVTEPQEESEE----EVEEPEERQQTPEVVPDDSGTFYDQTVSN 179
Query: 181 DLDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASV--DSAP--VAQGDAPEKKSY 236
DL+ E +P + E E E + P + VQ E V ++AP V + +P
Sbjct: 180 DLEEHLE--EPVAEPEPDP-EPEPEQEPVSEVQEEKSEPVLEEAAPEDVQKSSSPAPADI 236
Query: 237 ASIVKV-MKGYNISSAAY--VPARKARPT---PPNADQQSPAMAKPAPVPEASALSSDGA 290
A V+ ++ ++ +S +P A P PP+ + + +P PE S +
Sbjct: 237 AQTVQEDLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPETKPE-SQIPPQRP 295
Query: 291 PENSNVNEE 299
+ V E+
Sbjct: 296 QRDQRVREQ 304
>UNIPROTKB|Q32LC7 [details] [associations]
symbol:G3BP "Ras GTPase-activating protein-binding protein
1" species:9913 "Bos taurus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0090305 GO:GO:0004386 GO:GO:0004519 InterPro:IPR018222
PROSITE:PS50177 EMBL:BC109645 IPI:IPI00693236 RefSeq:NP_001032700.1
UniGene:Bt.5197 ProteinModelPortal:Q32LC7 STRING:Q32LC7
PRIDE:Q32LC7 Ensembl:ENSBTAT00000027067 GeneID:534214
KEGG:bta:534214 CTD:10146 eggNOG:NOG324333
GeneTree:ENSGT00390000011365 HOGENOM:HOG000220838
HOVERGEN:HBG007211 InParanoid:Q32LC7 OMA:VVSNDME OrthoDB:EOG4XWFZ0
NextBio:20876309 ArrayExpress:Q32LC7 Uniprot:Q32LC7
Length = 465
Score = 226 (84.6 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 80/291 (27%), Positives = 132/291 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIE---GED 181
V ND+FR+ V E E + +P D + D
Sbjct: 126 VHNDIFRYQDEVFGGFITEPQEESEE----EVEEPEERQQTPEVVPDDSGTFYDQTVSND 181
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASV--DSAP--VAQGDAPEKKSYA 237
L+ E +P + E E E + P + VQ E V ++AP V + +P A
Sbjct: 182 LEEHLE--EPVAEPEPEP-EPEPEQEPVSEVQEEKSEPVLEETAPEDVQKSSSPAPADIA 238
Query: 238 SIVKV-MKGYNISSAAY--VPARKARPT---PPNADQQSPAMAKPAPVPEA 282
V+ ++ ++ +S +P A P PP+ + + +P PE+
Sbjct: 239 QTVQEDLRTFSWASVTSKNLPPSGAVPVTGIPPHVVKVPASQPRPESKPES 289
>UNIPROTKB|E2RN45 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 OMA:VVSNDME EMBL:AAEX03003083
Ensembl:ENSCAFT00000028303 Uniprot:E2RN45
Length = 441
Score = 224 (83.9 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 83/310 (26%), Positives = 138/310 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ ++
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXX--XXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGED- 181
V ND+FR+ + PE D D+++ + E+
Sbjct: 126 VHNDIFRYQDEVFGGFVTEPQEESEEEVEEPEERQQTPEVVPDDSGTFYDQSVSNDLEEH 185
Query: 182 LDNG---PEVCDPS---DKEEGSVVEDEIVEP------PSNSVQNEVHASVDSAPVAQGD 229
L+ PE DP ++E S +++E EP P ++ ++ A D A Q D
Sbjct: 186 LEEPVAEPEP-DPEPEPEQEPVSEIQEEKSEPVLEETAPEDTQKSSSPAPTDIAQTVQED 244
Query: 230 APEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDG 289
S+AS+ N+ + VP PP+ + + +P PE S +
Sbjct: 245 L-RTFSWASVTSK----NLPPSGAVPVTGI---PPHVVKVPASQPRPESKPE-SQIPPQR 295
Query: 290 APENSNVNEE 299
+ V E+
Sbjct: 296 PQRDQRVREQ 305
>UNIPROTKB|D6RAC7 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI00966108 ProteinModelPortal:D6RAC7 SMR:D6RAC7
Ensembl:ENST00000507745 HOGENOM:HOG000138029 ArrayExpress:D6RAC7
Bgee:D6RAC7 Uniprot:D6RAC7
Length = 141
Score = 205 (77.2 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 47/128 (36%), Positives = 75/128 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRF 132
V ND+FR+
Sbjct: 126 VHNDMFRY 133
>UNIPROTKB|D6RB17 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0005737 GO:GO:0006810
InterPro:IPR018222 PROSITE:PS50177 HOGENOM:HOG000220838
HGNC:HGNC:30291 EMBL:AC104828 IPI:IPI00966366
ProteinModelPortal:D6RB17 SMR:D6RB17 Ensembl:ENST00000503660
ArrayExpress:D6RB17 Bgee:D6RB17 Uniprot:D6RB17
Length = 198
Score = 205 (77.2 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 47/128 (36%), Positives = 75/128 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 125
Query: 125 VLNDVFRF 132
V ND+FR+
Sbjct: 126 VHNDMFRY 133
>ZFIN|ZDB-GENE-070112-1972 [details] [associations]
symbol:g3bp2 "GTPase activating protein (SH3
domain) binding protein 2" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136
PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-070112-1972
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333
GeneTree:ENSGT00390000011365 HOGENOM:HOG000220838
HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0 CTD:9908 EMBL:CU570873
EMBL:BC129213 IPI:IPI00487372 RefSeq:NP_001074032.1 UniGene:Dr.6807
Ensembl:ENSDART00000046376 GeneID:556409 KEGG:dre:556409
InParanoid:A1L1U3 OMA:NDIFRYV NextBio:20881470 Uniprot:A1L1U3
Length = 507
Score = 224 (83.9 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 79/287 (27%), Positives = 131/287 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMTTVTTMKA-INDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D NG ++ +A I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPDFLHRFYGRNSSYVHGGLDLNGKLSEAVYGQAEIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
+SL + + +I+ DA + GV+V V G L+ +KF QTF LAP+ ++
Sbjct: 66 MSLQFSECHTKIRHVDAHATLSDGVVVQVMGELSNNGQPMRKFLQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXX--TAPTANVTEAPEPAHD--------QDH-IPADR 173
V ND+FR+ T + +PEP D + H + +
Sbjct: 126 VHNDIFRYEDEVFGDSEAELDEESEEETDEPEDRQPSPEPLQDSPSNANCYEPHPVSCNN 185
Query: 174 AIVIEGED--LDNGPEVC-DPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDA 230
+ E+ +D EV DP +E VE++ VE + V ++S P Q +
Sbjct: 186 GVEEAHEEAVMDLQSEVAPDPKIEESKLKVEEKDVEEFEEKALSPV--PLESPPNIQ-EP 242
Query: 231 PEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAM-AKP 276
P+ S+AS+ N+ + VP+ +P A P + KP
Sbjct: 243 PKTSSWASVTSK----NLPLSGTVPSAGGQPHVVKAPNTQPRVETKP 285
>UNIPROTKB|Q5ZMN1 [details] [associations]
symbol:G3BP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
InterPro:IPR012677 Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0000166 GO:GO:0006810
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR018222 PROSITE:PS50177
CTD:10146 eggNOG:NOG324333 GeneTree:ENSGT00390000011365
HOGENOM:HOG000220838 HOVERGEN:HBG007211 OrthoDB:EOG4XWFZ0
EMBL:AADN02028650 EMBL:AADN02028651 EMBL:AADN02028652 EMBL:AJ719353
IPI:IPI00593144 RefSeq:NP_001006150.1 UniGene:Gga.4912
STRING:Q5ZMN1 Ensembl:ENSGALT00000006615 GeneID:416265
KEGG:gga:416265 InParanoid:Q5ZMN1 OMA:RNDGGEN NextBio:20819751
Uniprot:Q5ZMN1
Length = 472
Score = 223 (83.6 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 71/232 (30%), Positives = 106/232 (45%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P +HRFY ++SS + DSNG V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPADAVYGQSDIHKKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN++D +I+ DA + GV+V V G L+ ++F QTF LAP+ ++
Sbjct: 66 LSLNFKDCHTKIRHVDAHATLNDGVVVQVMGELSNNMQPVRRFMQTFVLAPEGSVANKFY 125
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQ---DHIPADRAIVIEGED 181
V ND+FR+ P + E EP Q + +P D E
Sbjct: 126 VHNDIFRYQDEVFGDSDTE-------PPEESEEEGEEPEERQQTPEAVPDDTGAYYEQTV 178
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAPEK 233
++ E + + E E E + P Q E S PV + APE+
Sbjct: 179 SNDIEEHLEETTAEAEPEPEPEPEQEPEPEAQEE-----KSEPVLEESAPEE 225
>UNIPROTKB|E5RJU8 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292 ChiTaRS:G3BP1
EMBL:AC091982 IPI:IPI00973731 ProteinModelPortal:E5RJU8 SMR:E5RJU8
Ensembl:ENST00000522761 UCSC:uc010jhy.1 ArrayExpress:E5RJU8
Bgee:E5RJU8 Uniprot:E5RJU8
Length = 153
Score = 196 (74.1 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 45/124 (36%), Positives = 71/124 (57%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVL 126
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+ F+
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPEVHLALFLA 125
Query: 127 NDVF 130
+F
Sbjct: 126 QSLF 129
>UNIPROTKB|E5RH42 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00979451
ProteinModelPortal:E5RH42 SMR:E5RH42 Ensembl:ENST00000520578
ArrayExpress:E5RH42 Bgee:E5RH42 Uniprot:E5RH42
Length = 117
Score = 192 (72.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 43/112 (38%), Positives = 67/112 (59%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQ 118
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPE 117
>UNIPROTKB|Q5HYE9 [details] [associations]
symbol:DKFZp313K0921 "Putative uncharacterized protein
DKFZp313K0921" species:9606 "Homo sapiens" [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 CTD:10146 RefSeq:NP_005745.1
RefSeq:NP_938405.1 UniGene:Hs.587054 DNASU:10146 GeneID:10146
KEGG:hsa:10146 HGNC:HGNC:30292 PharmGKB:PA162389105
GenomeRNAi:10146 NextBio:38391 HOGENOM:HOG000138029 EMBL:AC091982
EMBL:AK300098 EMBL:BX647869 IPI:IPI00982147 SMR:Q5HYE9
STRING:Q5HYE9 Ensembl:ENST00000520177 Ensembl:ENST00000522367
HOVERGEN:HBG055943 Uniprot:Q5HYE9
Length = 122
Score = 192 (72.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 43/112 (38%), Positives = 67/112 (59%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQ 118
+S N+ + +I+ DA + GV+V V G L+ + ++F QTF LAP+
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLAPE 117
>UNIPROTKB|E5RIZ6 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292 ChiTaRS:G3BP1
EMBL:AC091982 IPI:IPI00974560 ProteinModelPortal:E5RIZ6 SMR:E5RIZ6
Ensembl:ENST00000507878 ArrayExpress:E5RIZ6 Bgee:E5RIZ6
Uniprot:E5RIZ6
Length = 148
Score = 187 (70.9 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVH----------RFY-QDSSLLSRP-DSNGSMT-TV 56
PS +VG FV QYY +L+Q+P ++H RFY ++SS + DSNG V
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHSLHIGYHMIIRFYGKNSSYVHGGLDSNGKPADAV 65
Query: 57 TTMKAINDRILSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLA 116
K I+ +++S N+ + +I+ DA + GV+V V G L+ + ++F QTF LA
Sbjct: 66 YGQKEIHRKVMSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNNQALRRFMQTFVLA 125
Query: 117 PQDK--GGYFVLNDVFRF 132
P+ ++V ND+FR+
Sbjct: 126 PEGSVANKFYVHNDIFRY 143
>UNIPROTKB|F1LVS8 [details] [associations]
symbol:F1LVS8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0006810 Gene3D:3.30.70.330 GO:GO:0003676
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177
GeneTree:ENSGT00390000011365 IPI:IPI00561182
Ensembl:ENSRNOT00000002166 Uniprot:F1LVS8
Length = 439
Score = 206 (77.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 84/308 (27%), Positives = 133/308 (43%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRF+ ++SS + D++G V I+ ++
Sbjct: 10 PSPLLVGREFVRQYYTLLNRAPEYLHRFFGRNSSYVHGGVDASGKPQEAVYGQNDIHYKM 69
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDK--GGYF 124
LSLN+ + +I DA + GV+V V G L+ ++KF QTF LAP+ ++
Sbjct: 70 LSLNFSECHTKICHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFY 129
Query: 125 VLNDVFRFXXXXXXXXX----XXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGE 180
V ND+FR+ P+ V E A+ H P I E
Sbjct: 130 VHNDMFRYEDEVFGDSEPELDEVEEEQENRQPSPEVQENANSAYYDAH-PETNGIEEPLE 188
Query: 181 DLDNGPEVCDPSDKEEG--SVVED---EIVEPPSNSVQNEVHASV-DSAPVAQGDA-PEK 233
+ + PE S+K E E+ E +E S + AS+ P + DA PE
Sbjct: 189 ESSHEPEPEPESEKTEELKPQAEEKHLEELEEKSATPPPADPASLPQEPPKPRVDAKPEV 248
Query: 234 KSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPEN 293
+S A ++ G+ P R RP + +Q + P++ L P +
Sbjct: 249 QSQAPRIREQPGF--------PPRGPRPGRGDTEQNDSDNRRIIRYPDSHQLFVGNLPHD 300
Query: 294 SNVNEEAE 301
+ NE E
Sbjct: 301 IDENELKE 308
>UNIPROTKB|D6RGJ4 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00965049 ProteinModelPortal:D6RGJ4
SMR:D6RGJ4 Ensembl:ENST00000509100 ArrayExpress:D6RGJ4 Bgee:D6RGJ4
Uniprot:D6RGJ4
Length = 125
Score = 185 (70.2 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 42/112 (37%), Positives = 66/112 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQ 118
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP+
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPE 117
>UNIPROTKB|D6RBW8 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00966981 ProteinModelPortal:D6RBW8
SMR:D6RBW8 Ensembl:ENST00000511146 ArrayExpress:D6RBW8 Bgee:D6RBW8
Uniprot:D6RBW8
Length = 116
Score = 183 (69.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 42/111 (37%), Positives = 65/111 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAP 117
LSLN+ + +I+ DA + GV+V V G L+ ++KF QTF LAP
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAP 116
>UNIPROTKB|F1M2M6 [details] [associations]
symbol:F1M2M6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR002075
Pfam:PF02136 GO:GO:0005737 GO:GO:0006810 InterPro:IPR018222
PROSITE:PS50177 GeneTree:ENSGT00390000011365 IPI:IPI00563721
Ensembl:ENSRNOT00000048672 OMA:QSHTISS Uniprot:F1M2M6
Length = 403
Score = 178 (67.7 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 73/283 (25%), Positives = 115/283 (40%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRP--DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L++ P ++HRFY S + DSNG V K I+ ++
Sbjct: 8 PSPLLVGREFVRQYYTLLNRVPDMLHRFYVKKSSYAHGGLDSNGKPADAVYGQKEIHRKV 67
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGG--YF 124
+ N+ + +I DA + V+V V G L+ + +F QTF LAP+ ++
Sbjct: 68 MLQNFTNCHTKIHHVDAYATQNDRVVVQVMGLLSNNNQALWRFMQTFVLAPEGSTANKFY 127
Query: 125 VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGEDLDN 184
V D+FR + E PE + +D + DL+
Sbjct: 128 VHKDIFRHQDEVFGGFVTEPQEE-----SEEEVEEPEERQQSPEVVSDDYQTVSN-DLEE 181
Query: 185 GPE--VCDPSDKEEGSVVEDEIVEPPSNSVQN---EVHASVDSAPVAQGDAPEKKSYASI 239
E V +P + E +E E EP S + ++ +V S P A E S
Sbjct: 182 HLEEPVVEPPEPE----LEPEW-EPVSYTQEDKPEDVQKSTSRVPADVASAQEDLRTFSW 236
Query: 240 VKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEA 282
V N+ + VP TPP+ + + P P++
Sbjct: 237 ASVTSK-NLPPSGAVPVTG---TPPHMVKVPASQPHPESKPDS 275
Score = 57 (25.1 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 20/76 (26%), Positives = 29/76 (38%)
Query: 255 PARKARPTPPNADQQS---PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLA 311
P + P P DQQ P +P P+ EA G E + + +++ NL
Sbjct: 273 PDSQIPPQRPQRDQQRINIPPQRRPRPIREAG---EPGDVEPRRMVRHPDSHQLFIGNLP 329
Query: 312 FTTTSTELEEAFKIFG 327
+EL KI G
Sbjct: 330 HEVDKSELRIFSKIKG 345
>TAIR|locus:2099926 [details] [associations]
symbol:AT3G55540 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] [GO:0006810 "transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=ISS] InterPro:IPR002075
Pfam:PF02136 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 EMBL:AL132975
IPI:IPI00537140 PIR:T47693 RefSeq:NP_191113.1 UniGene:At.53937
ProteinModelPortal:Q9M2S5 SMR:Q9M2S5 PaxDb:Q9M2S5 PRIDE:Q9M2S5
EnsemblPlants:AT3G55540.1 GeneID:824719 KEGG:ath:AT3G55540
TAIR:At3g55540 eggNOG:NOG258130 HOGENOM:HOG000153240
InParanoid:Q9M2S5 OMA:EALANCF PhylomeDB:Q9M2S5
ProtClustDB:CLSN2915780 Genevestigator:Q9M2S5 Uniprot:Q9M2S5
Length = 334
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 41/127 (32%), Positives = 77/127 (60%)
Query: 11 SAQVVGNAFVEQYYHILHQSPGLVHR-FYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
+++ + N F++ Y+ L P +V +Y D S+++RP +G+M + T+ +AI ++I+S
Sbjct: 28 TSEALANCFLQSYFLNLGVYPEVVQMMWYADDSVMTRPGPDGTMMSFTSPEAIQEQIVSC 87
Query: 70 NYEDYTAEIKTADAQD---SYEKGVIVLVTGCLTGKDN-VKKKFTQTFFLAPQDKGGYFV 125
+YE + ++ + AQ S E G ++VTG LT KD V+++F Q+ +LA + Y +
Sbjct: 88 DYEGASFDVMSFAAQSCNTSSEDGAFIMVTGFLTCKDKQVRRRFVQSLYLARRQDRSYAI 147
Query: 126 LNDVFRF 132
+ND R+
Sbjct: 148 VNDFLRY 154
Score = 131 (51.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 19 FVEQYYHI-LHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTT--MKAINDRILSLNYEDYT 75
FV+ YY + + + GL+ Y + S++SRP S T V + AIN R+ + +
Sbjct: 170 FVKVYYELPMREELGLM---YVNESIMSRPTSTSGRTMVEMPGLDAINKRVSNEHKRASN 226
Query: 76 AEIKTADAQ--DSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
+ + D Q S++ + ++V G +T D ++KF Q F++ G Y + ND+ R+
Sbjct: 227 FILNSVDYQISRSFKDRMFIMVCGFVTLDDKTERKFLQFFYVTRCHNGSYVIYNDILRY 285
>UNIPROTKB|D6RE13 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00966712 ProteinModelPortal:D6RE13
SMR:D6RE13 Ensembl:ENST00000515457 ArrayExpress:D6RE13 Bgee:D6RE13
Uniprot:D6RE13
Length = 111
Score = 163 (62.4 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 38/106 (35%), Positives = 61/106 (57%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQT 112
LSLN+ + +I+ DA + GV+V V G L+ ++KF QT
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQT 111
>ASPGD|ASPL0000071333 [details] [associations]
symbol:ntfA species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0008536 "Ran GTPase binding" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0005737 GO:GO:0015031
EMBL:BN001303 EMBL:AACD01000084 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 HOGENOM:HOG000197024 OMA:MTFEGVQ EMBL:AY038983
RefSeq:XP_662546.1 ProteinModelPortal:Q96VN3 SMR:Q96VN3
STRING:Q96VN3 EnsemblFungi:CADANIAT00005455 GeneID:2872742
KEGG:ani:AN4942.2 OrthoDB:EOG4HHSBX Uniprot:Q96VN3
Length = 125
Score = 159 (61.0 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 42/121 (34%), Positives = 62/121 (51%)
Query: 13 QVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYE 72
Q + FV YY + + Y+D S+L+ S + + I +++ SL ++
Sbjct: 5 QSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETS-----AIQGVAGIIEKLTSLPFQ 59
Query: 73 DYTAEIKTADAQDSYEKG-VIVLVTGCL-TGKDNVKKKFTQTFFLAPQDKGGYFVLNDVF 130
++ T DAQ S E G ++VLVTG L ++ +TQTF L P G YFVLNDVF
Sbjct: 60 KVQHQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVF 119
Query: 131 R 131
R
Sbjct: 120 R 120
>UNIPROTKB|E5RI46 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00982785
ProteinModelPortal:E5RI46 SMR:E5RI46 Ensembl:ENST00000520006
ArrayExpress:E5RI46 Bgee:E5RI46 Uniprot:E5RI46
Length = 105
Score = 153 (58.9 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 36/97 (37%), Positives = 57/97 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKD 103
+S N+ + +I+ DA + GV+V V G L+ +
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN 102
>UNIPROTKB|E5RIF8 [details] [associations]
symbol:G3BP1 "Ras GTPase-activating protein-binding protein
1" species:9606 "Homo sapiens" [GO:0006810 "transport"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30292
ChiTaRS:G3BP1 EMBL:AC091982 IPI:IPI00982712
ProteinModelPortal:E5RIF8 SMR:E5RIF8 Ensembl:ENST00000523519
ArrayExpress:E5RIF8 Bgee:E5RIF8 Uniprot:E5RIF8
Length = 106
Score = 153 (58.9 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 36/97 (37%), Positives = 57/97 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLLSRP-DSNGSMT-TVTTMKAINDRI 66
PS +VG FV QYY +L+Q+P ++HRFY ++SS + DSNG V K I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNQAPDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKD 103
+S N+ + +I+ DA + GV+V V G L+ +
Sbjct: 66 MSQNFTNCHTKIRHVDAHATLNDGVVVQVMGLLSNNN 102
>UNIPROTKB|D6RBR0 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
HOGENOM:HOG000138029 IPI:IPI00965308 ProteinModelPortal:D6RBR0
SMR:D6RBR0 Ensembl:ENST00000507252 ArrayExpress:D6RBR0 Bgee:D6RBR0
Uniprot:D6RBR0
Length = 102
Score = 143 (55.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLT 100
LSLN+ + +I+ DA + GV+V V G L+
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS 99
>UNIPROTKB|D6REX8 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI00964602 ProteinModelPortal:D6REX8 SMR:D6REX8
Ensembl:ENST00000511868 ArrayExpress:D6REX8 Bgee:D6REX8
Uniprot:D6REX8
Length = 99
Score = 143 (55.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 34/94 (36%), Positives = 55/94 (58%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLT 100
LSLN+ + +I+ DA + GV+V V G L+
Sbjct: 66 LSLNFSECHTKIRHVDAHATLSDGVVVQVMGLLS 99
>DICTYBASE|DDB_G0276425 [details] [associations]
symbol:nutf2 "nuclear transport factor 2"
species:44689 "Dictyostelium discoideum" [GO:0006810 "transport"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0006606 "protein import into
nucleus" evidence=ISS] [GO:0005635 "nuclear envelope" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002075 Pfam:PF02136
dictyBase:DDB_G0276425 GO:GO:0005737 GO:GO:0005635
GenomeReviews:CM000151_GR GO:GO:0006606 GO:GO:0008536
EMBL:AAFI02000015 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 OMA:MTFEGVQ RefSeq:XP_643125.1 HSSP:Q5CQI4
ProteinModelPortal:Q86HW7 IntAct:Q86HW7 STRING:Q86HW7
EnsemblProtists:DDB0233957 GeneID:8620530 KEGG:ddi:DDB_G0276425
Uniprot:Q86HW7
Length = 127
Score = 140 (54.3 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
P VG FVE YY I + + + YQ + L+ G ++ AI I+ L
Sbjct: 6 PQVVGVGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTW---EGKF--LSGADAIVKHIVEL 60
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLT--GKDNVKKKFTQTFFLAPQDKGGYFVLN 127
++ +I + D Q +Y+ G+++ VTG L G+ + KF Q F LA + G + ++N
Sbjct: 61 PFQQTNRKINSIDCQQTYQPGIMITVTGTLIIDGEAKNQLKFVQVFNLA-SNNGSFLLIN 119
Query: 128 DVFR 131
D FR
Sbjct: 120 DFFR 123
>POMBASE|SPAC15F9.03c [details] [associations]
symbol:nxt2 "nuclear transport factor Nxt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006606 "protein import
into nucleus" evidence=ISO] [GO:0008536 "Ran GTPase binding"
evidence=ISO] [GO:0031965 "nuclear membrane" evidence=ISO]
InterPro:IPR002075 Pfam:PF02136 PomBase:SPAC15F9.03c GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0031965 GO:GO:0006606
GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
HOGENOM:HOG000197024 OMA:MTFEGVQ OrthoDB:EOG4HHSBX PIR:T38039
RefSeq:XP_001713065.1 ProteinModelPortal:Q10100 SMR:Q10100
STRING:Q10100 EnsemblFungi:SPAC15F9.03c.1 GeneID:2542783
KEGG:spo:SPAC15F9.03c NextBio:20803827 Uniprot:Q10100
Length = 123
Score = 139 (54.0 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 38/115 (33%), Positives = 62/115 (53%)
Query: 19 FVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDYTAEI 78
F + YY + Y++ S+LS G+ T KAI ++++SL ++ I
Sbjct: 11 FTQFYYQTFDSDRSQLSSLYREESMLS---FEGAQLQGT--KAIVEKLVSLPFQRVQHRI 65
Query: 79 KTADAQDSYEKG-VIVLVTG-CLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFR 131
T DAQ + G VIV+VTG L ++ + ++++Q F L + G Y+VLND+FR
Sbjct: 66 STLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLV-NNNGNYYVLNDLFR 119
>GENEDB_PFALCIPARUM|PF14_0122 [details] [associations]
symbol:PF14_0122 "nuclear transport factor 2,
putative" species:5833 "Plasmodium falciparum" [GO:0006606 "protein
import into nucleus" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002075 Pfam:PF02136 GO:GO:0005622
GO:GO:0006606 EMBL:AE014187 InterPro:IPR018222 PROSITE:PS50177
HOGENOM:HOG000197024 RefSeq:XP_001348295.2
ProteinModelPortal:Q8ILX1 PRIDE:Q8ILX1
EnsemblProtists:PF14_0122:mRNA GeneID:811703 KEGG:pfa:PF14_0122
EuPathDB:PlasmoDB:PF3D7_1412300 ProtClustDB:CLSZ2431947
Uniprot:Q8ILX1
Length = 125
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
P + +G FV Y+ + + + Y+D S++S + T+ I +R+ L
Sbjct: 6 PQFEEIGKEFVNHYFQLFNSGRNELAALYKDISMMSFENDQCRGTS-----QIIERLNKL 60
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDV 129
+ + D Q + G+++LV G + ++N KF ++F L P GGYF+ ND+
Sbjct: 61 P-PTVVHKCLSLDIQPTPNNGILILVCGDIIIEENKPLKFCRSFHLFPLPSGGYFIFNDL 119
Query: 130 FRF 132
FRF
Sbjct: 120 FRF 122
>UNIPROTKB|Q8ILX1 [details] [associations]
symbol:PF14_0122 "Nuclear transport factor 2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0006606 "protein import into
nucleus" evidence=ISS] InterPro:IPR002075 Pfam:PF02136
GO:GO:0005622 GO:GO:0006606 EMBL:AE014187 InterPro:IPR018222
PROSITE:PS50177 HOGENOM:HOG000197024 RefSeq:XP_001348295.2
ProteinModelPortal:Q8ILX1 PRIDE:Q8ILX1
EnsemblProtists:PF14_0122:mRNA GeneID:811703 KEGG:pfa:PF14_0122
EuPathDB:PlasmoDB:PF3D7_1412300 ProtClustDB:CLSZ2431947
Uniprot:Q8ILX1
Length = 125
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSL 69
P + +G FV Y+ + + + Y+D S++S + T+ I +R+ L
Sbjct: 6 PQFEEIGKEFVNHYFQLFNSGRNELAALYKDISMMSFENDQCRGTS-----QIIERLNKL 60
Query: 70 NYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDV 129
+ + D Q + G+++LV G + ++N KF ++F L P GGYF+ ND+
Sbjct: 61 P-PTVVHKCLSLDIQPTPNNGILILVCGDIIIEENKPLKFCRSFHLFPLPSGGYFIFNDL 119
Query: 130 FRF 132
FRF
Sbjct: 120 FRF 122
>DICTYBASE|DDB_G0277957 [details] [associations]
symbol:DDB_G0277957 "nuclear transport factor 2
(NTF2) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002075 InterPro:IPR012677
Pfam:PF00076 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0277957 GO:GO:0000166 GO:GO:0006810
EMBL:AAFI02000023 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG324333
RefSeq:XP_642031.1 ProteinModelPortal:Q54Z21
EnsemblProtists:DDB0304427 GeneID:8621242 KEGG:ddi:DDB_G0277957
InParanoid:Q54Z21 OMA:STSANVV Uniprot:Q54Z21
Length = 516
Score = 122 (48.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 33/120 (27%), Positives = 64/120 (53%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
V +F+ +Y+ +L ++P + FY +S ++R NG +T+ IN+ +++ N +
Sbjct: 7 VAASFLLKYFTLLIKTPENLKDFYHQNSKITRRFENGKANILTSYDNINEFLVN-NSAKF 65
Query: 75 --TAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFRF 132
A I + D Q E + + G + G D ++F Q+F+L + +G +F+ ND+F F
Sbjct: 66 GGNANISSIDCQPLGES-IFMTCIGSI-GFDGNVRRFLQSFYLE-KIQGSFFISNDIFAF 122
Score = 82 (33.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 35/175 (20%), Positives = 74/175 (42%)
Query: 191 PSDKEEGSVVEDEIVEPPSNSVQNEVHASVDSAPVAQGDAP-EKKSYASIVKVMKGYNIS 249
P+ E +V + EP +N+ N + P AP +K+++A +V + +
Sbjct: 231 PTPTETKAVETTKKPEPTTNTTTNTTTPA--EKPKETTPAPHQKQTWAQLVLINSTAQTA 288
Query: 250 SAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNVNEEAE-------G 302
SA+ P + + + + + + +++ + N++ + G
Sbjct: 289 SASEEPTQSSSSSSSQPSSSPSSSSSSVNNNSNTTTTTNNTTTTTTANKQKDDHHFSKDG 348
Query: 303 CSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETPGSVQ 357
++++ + ++EAF FG + + V++ + GY GFV FE P SVQ
Sbjct: 349 NTVFISFKSSKVDQAPIKEAFNQFGVV--SNVRILT---GY--GFVEFEKPESVQ 396
>FB|FBgn0031145 [details] [associations]
symbol:Ntf-2 "Nuclear transport factor-2" species:7227
"Drosophila melanogaster" [GO:0006606 "protein import into nucleus"
evidence=ISS;NAS] [GO:0008320 "protein transmembrane transporter
activity" evidence=ISS] [GO:0002807 "positive regulation of
antimicrobial peptide biosynthetic process" evidence=IMP]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR002075
Pfam:PF02136 GO:GO:0006810 EMBL:AE014298 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 GeneTree:ENSGT00510000047030
HSSP:P33331 UniGene:Dm.7205 GeneID:33078 KEGG:dme:Dmel_CG1740
CTD:33078 FlyBase:FBgn0031145 GenomeRNAi:33078 NextBio:781834
GO:GO:0002807 EMBL:AY094761 EMBL:AY531117 EMBL:AY673973
RefSeq:NP_608422.1 SMR:Q9VRD6 IntAct:Q9VRD6 MINT:MINT-949859
STRING:Q9VRD6 EnsemblMetazoa:FBtr0077241 EnsemblMetazoa:FBtr0333762
UCSC:CG1740-RA InParanoid:Q9VRD6 OMA:DAIMARF Uniprot:Q9VRD6
Length = 130
Score = 136 (52.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVH--RFYQDSSLLSRPDSNGSMTTVTTMKAINDRIL 67
P + +G FV+QYY I + FY S+ S G + I +++
Sbjct: 5 PQYEDIGKGFVQQYYAIFDDPANRANVVNFY--SATDSFMTFEGHQ--IQGAPKILEKVQ 60
Query: 68 SLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLN 127
SL+++ T I T D+Q +++ GV++ V G L D+ F+Q FFL + G +FV +
Sbjct: 61 SLSFQKITRVITTVDSQPTFDGGVLINVLGRLQCDDDPPHAFSQVFFLKA-NAGTFFVAH 119
Query: 128 DVFR 131
D+FR
Sbjct: 120 DIFR 123
>TAIR|locus:2200066 [details] [associations]
symbol:NTL "NTF2-like" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006606 "protein import into nucleus" evidence=ISS] [GO:0006810
"transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=ISS] InterPro:IPR002075 Pfam:PF02136
EMBL:CP002684 GO:GO:0006810 GO:GO:0005622 InterPro:IPR018222
PROSITE:PS50177 IPI:IPI00938605 RefSeq:NP_001154326.1
UniGene:At.51573 ProteinModelPortal:F4I8X9 SMR:F4I8X9
EnsemblPlants:AT1G11570.2 GeneID:837700 KEGG:ath:AT1G11570
OMA:TEMERCH ArrayExpress:F4I8X9 Uniprot:F4I8X9
Length = 132
Score = 133 (51.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
V +AFV YYH+ + Y +SLL+ G T+ + I++++ L ++
Sbjct: 12 VASAFVNHYYHLFDNDRSSLSSLYNPTSLLT---FEGQ--TIYGVDNISNKLKQLPFDQC 66
Query: 75 TAEIKTADAQDSYEKG----VIVLVTGC--LTGKDNVKKKFTQTFFLAPQDKGGYFVLND 128
I T D+Q S G ++V V+G L G+D+ +F+QTF L P +G +FV N+
Sbjct: 67 HHLISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDH-PLRFSQTFHLIPVLQGSFFVQNE 125
Query: 129 VFR 131
+FR
Sbjct: 126 MFR 128
>FB|FBgn0032680 [details] [associations]
symbol:Ntf-2r "Nuclear transport factor-2-related"
species:7227 "Drosophila melanogaster" [GO:0006606 "protein import
into nucleus" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810
GO:GO:0005622 InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
HSSP:P33331 OrthoDB:EOG43BK59 EMBL:AY150767 EMBL:AY150768
FlyBase:FBgn0032680 InParanoid:Q8I078 Uniprot:Q8I078
Length = 130
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 35/119 (29%), Positives = 56/119 (47%)
Query: 15 VGNAFVEQYYHILHQSPGL--VHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYE 72
+G FV+QYY I V FY + + N + I +++ SL+++
Sbjct: 10 IGKEFVQQYYAIFDDPANRKNVINFYNATDSFMTFEGN----QIQGAPKILEKVQSLSFQ 65
Query: 73 DYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFR 131
I T D+Q + + GV+++V G L D+ F+Q F L P G FV +D+FR
Sbjct: 66 KIARVITTVDSQPTSDGGVLIIVLGRLKCDDDPPHAFSQIFLLKPNG-GSLFVAHDIFR 123
>TAIR|locus:2010509 [details] [associations]
symbol:NTF2B "AT1G27970" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006606 "protein import into nucleus" evidence=IGI;ISS]
[GO:0006810 "transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IGI] [GO:0008536 "Ran GTPase binding" evidence=IGI;IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0006820 "anion transport" evidence=RCA]
[GO:0006862 "nucleotide transport" evidence=RCA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=RCA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0015696
"ammonium transport" evidence=RCA] [GO:0015802 "basic amino acid
transport" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0043069 "negative regulation of programmed cell
death" evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043269 "regulation of ion transport" evidence=RCA]
InterPro:IPR002075 Pfam:PF02136 EMBL:CP002684 GO:GO:0005829
GO:GO:0005886 GO:GO:0005635 EMBL:AC069471 GO:GO:0006606
GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177
HOGENOM:HOG000197024 OMA:DAIMARF IPI:IPI00846718
RefSeq:NP_001077612.1 UniGene:At.40966 ProteinModelPortal:A8MS55
SMR:A8MS55 STRING:A8MS55 PRIDE:A8MS55 EnsemblPlants:AT1G27970.2
GeneID:839690 KEGG:ath:AT1G27970 ProtClustDB:CLSN2679350
Genevestigator:A8MS55 Uniprot:A8MS55
Length = 134
Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/119 (31%), Positives = 62/119 (52%)
Query: 15 VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILSLNYEDY 74
V AFVE YY + + YQ++S+L+ G + +++I ++ SL ++
Sbjct: 9 VSKAFVEHYYSTFDTNRVGLAGLYQEASMLT---FEGQK--IQGVQSIVAKLTSLPFQQC 63
Query: 75 TAEIKTADAQDSYE-KGVIVLVTGCL--TGKDNVKKKFTQTFFLAPQDKGGYFVLNDVF 130
I T D Q S G++V V+G L G+++ K F+Q F L P +G ++V ND+F
Sbjct: 64 KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALK-FSQMFHLMPTPQGSFYVFNDIF 121
>SGD|S000000811 [details] [associations]
symbol:NTF2 "Nuclear envelope protein" species:4932
"Saccharomyces cerevisiae" [GO:0006913 "nucleocytoplasmic
transport" evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=IMP] [GO:0008536 "Ran GTPase binding" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 SGD:S000000811 GO:GO:0016021
GO:GO:0005737 GO:GO:0005635 EMBL:BK006939 GO:GO:0006606 EMBL:U18778
InterPro:IPR018222 PROSITE:PS50177 eggNOG:NOG286483
GeneTree:ENSGT00510000047030 HOGENOM:HOG000197024 OMA:MTFEGVQ
OrthoDB:EOG4HHSBX EMBL:AY558448 EMBL:L22204 PIR:S50467
RefSeq:NP_010925.1 PDB:1GY7 PDB:1GYB PDBsum:1GY7 PDBsum:1GYB
ProteinModelPortal:P33331 SMR:P33331 DIP:DIP-2245N IntAct:P33331
MINT:MINT-525215 STRING:P33331 PaxDb:P33331 PeptideAtlas:P33331
EnsemblFungi:YER009W GeneID:856727 KEGG:sce:YER009W CYGD:YER009w
EvolutionaryTrace:P33331 NextBio:982832 Genevestigator:P33331
GermOnline:YER009W Uniprot:P33331
Length = 125
Score = 125 (49.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 35 HRFYQDSSLLSRPDSNGSMTTVTTM-----KAINDRILSLNYEDYTAEIKTADAQDSYEK 89
++F D S L N SM T T K I ++++SL ++ I T DAQ +
Sbjct: 18 NQFDTDRSQLGNLYRNESMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLDAQPASPN 77
Query: 90 G-VIVLVTG-CLTGKDNVKKKFTQTFFLAPQDKGGYFVLNDVFR 131
G V+V++TG L ++ ++F+Q F L P D Y+V ND+FR
Sbjct: 78 GDVLVMITGDLLIDEEQNPQRFSQVFHLIP-DGNSYYVFNDIFR 120
>MGI|MGI:1926034 [details] [associations]
symbol:Celf3 "CUGBP, Elav-like family member 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=ISO] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1926034 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0030317
HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026
eggNOG:NOG251494 HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837
CTD:11189 OMA:HSAYLNP GO:GO:0000381 OrthoDB:EOG4RJG30 EMBL:AY165052
EMBL:BC057553 IPI:IPI00461847 IPI:IPI00854025 RefSeq:NP_766022.1
UniGene:Mm.44292 ProteinModelPortal:Q8CIN6 SMR:Q8CIN6 STRING:Q8CIN6
PhosphoSite:Q8CIN6 PaxDb:Q8CIN6 PRIDE:Q8CIN6
Ensembl:ENSMUST00000029784 GeneID:78784 KEGG:mmu:78784
UCSC:uc008qgl.1 UCSC:uc008qgm.1 InParanoid:Q8CIN6 NextBio:349492
Bgee:Q8CIN6 CleanEx:MM_TNRC4 Genevestigator:Q8CIN6 Uniprot:Q8CIN6
Length = 465
Score = 150 (57.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 46/151 (30%), Positives = 65/151 (43%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 294 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 349
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P P+ + E +GC+I++ +L T +E+ + F FG
Sbjct: 350 AQQP----PPP-PQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 404
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
+ V V R+ Q CFGFV+F+ P S Q
Sbjct: 405 HVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 77 EIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKF 109
++K AD++ ++ + V + G ++V+K F
Sbjct: 82 QVKPADSESRGDRKLFVGMLGKQQTDEDVRKMF 114
>TAIR|locus:2015914 [details] [associations]
symbol:NTF2A "AT1G27310" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0006606 "protein import into nucleus"
evidence=IGI;ISS;IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IGI] [GO:0008536 "Ran GTPase
binding" evidence=IGI;IPI] [GO:0006605 "protein targeting"
evidence=RCA] [GO:0006869 "lipid transport" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR002075 Pfam:PF02136 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 GO:GO:0005635 GO:GO:0006606
EMBL:AC004557 GO:GO:0008536 InterPro:IPR018222 PROSITE:PS50177
eggNOG:NOG286483 HOGENOM:HOG000197024 HSSP:P33331 OMA:CKHNITT
ProtClustDB:CLSN2679350 EMBL:AY042889 EMBL:AY072473 IPI:IPI00540337
PIR:H86398 RefSeq:NP_174051.1 UniGene:At.48239 UniGene:At.66864
ProteinModelPortal:Q9FZK4 SMR:Q9FZK4 STRING:Q9FZK4 PaxDb:Q9FZK4
PRIDE:Q9FZK4 EnsemblPlants:AT1G27310.1 GeneID:839620
KEGG:ath:AT1G27310 TAIR:At1g27310 InParanoid:Q9FZK4
PhylomeDB:Q9FZK4 Genevestigator:Q9FZK4 Uniprot:Q9FZK4
Length = 122
Score = 124 (48.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 42/123 (34%), Positives = 60/123 (48%)
Query: 15 VGNAFVEQYYHILHQS-PGLVHRFYQDSSLLSRPDSN--GSMTTVTTMKAINDRILSLNY 71
V AFVE YY + PGLV YQ+ S+L+ GS V ++ L +
Sbjct: 6 VAKAFVEHYYSTFDANRPGLVS-LYQEGSMLTFEGQKIQGSQNIVA-------KLTGLPF 57
Query: 72 EDYTAEIKTADAQDSYEKG-VIVLVTGCL--TGKDNVKKKFTQTFFLAPQDKGGYFVLND 128
+ I T D Q S G ++V V+G L G+ + K F+Q F L ++G Y+V ND
Sbjct: 58 QQCKHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALK-FSQMFHLI-SNQGNYYVFND 115
Query: 129 VFR 131
+FR
Sbjct: 116 IFR 118
>UNIPROTKB|F1ST15 [details] [associations]
symbol:CELF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048026 "positive regulation of mRNA splicing, via
spliceosome" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0007283 GO:GO:0003723 GO:GO:0030317 GO:GO:0048026
GeneTree:ENSGT00560000076837 OMA:HSAYLNP GO:GO:0000381
EMBL:CU457723 Ensembl:ENSSSCT00000007252 Uniprot:F1ST15
Length = 465
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 47/151 (31%), Positives = 68/151 (45%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA M+ Y +AAY PA + P A
Sbjct: 296 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAG----MQHY---TAAY-PAAYSLVAP--AF 344
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q PA+ P P + E +GC+I++ +L T +E+ + F FG
Sbjct: 345 PQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 404
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
+ V V R+ Q CFGFV+F+ P S Q
Sbjct: 405 HVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435
>WB|WBGene00004305 [details] [associations]
symbol:ran-4 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0060465 "pharynx development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] InterPro:IPR002075
Pfam:PF02136 GO:GO:0009792 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0000003 GO:GO:0060465 InterPro:IPR018222
PROSITE:PS50177 EMBL:Z75546 eggNOG:NOG286483
GeneTree:ENSGT00510000047030 HOGENOM:HOG000197024 OMA:MTFEGVQ
PIR:T23921 RefSeq:NP_492322.1 ProteinModelPortal:Q21735 SMR:Q21735
IntAct:Q21735 STRING:Q21735 PaxDb:Q21735 EnsemblMetazoa:R05D11.3.1
EnsemblMetazoa:R05D11.3.2 GeneID:172648 KEGG:cel:CELE_R05D11.3
UCSC:R05D11.3.1 CTD:172648 WormBase:R05D11.3 InParanoid:Q21735
NextBio:876417 Uniprot:Q21735
Length = 133
Score = 123 (48.4 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 37/126 (29%), Positives = 56/126 (44%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRIL-- 67
P + V AF++ YY G+ Q S L P+ N MT D IL
Sbjct: 5 PDYESVAKAFIQHYYSKFDVGDGMSRA--QGLSDLYDPE-NSYMTFEGQQAKGRDGILQK 61
Query: 68 --SLNYEDYTAEIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGGYFV 125
+L + I D+Q Y+ + V+V G L ++ F+Q F L P ++G YF+
Sbjct: 62 FTTLGFTKIQRAITVIDSQPLYDGSIQVMVLGQLKTDEDPINPFSQVFILRPNNQGSYFI 121
Query: 126 LNDVFR 131
N++FR
Sbjct: 122 GNEIFR 127
>UNIPROTKB|Q5SZQ8 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030317 "sperm
motility" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003723 "RNA binding"
evidence=IMP] [GO:0008380 "RNA splicing" evidence=IMP] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0048026
"positive regulation of mRNA splicing, via spliceosome"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0030317 GO:GO:0000398 HOVERGEN:HBG107646 KO:K13207
GO:GO:0048026 eggNOG:NOG251494 CTD:11189 GO:GO:0000381
OrthoDB:EOG4RJG30 EMBL:AF329264 EMBL:AY165003 EMBL:AL589765
EMBL:BC052491 EMBL:BC068008 EMBL:BC104758 EMBL:BC143226 EMBL:U80746
EMBL:AF284423 IPI:IPI00852836 IPI:IPI00852895 IPI:IPI00852999
RefSeq:NP_009116.3 UniGene:Hs.26047 PDB:2DNO PDBsum:2DNO
ProteinModelPortal:Q5SZQ8 SMR:Q5SZQ8 IntAct:Q5SZQ8
MINT:MINT-4866187 STRING:Q5SZQ8 PhosphoSite:Q5SZQ8 DMDM:74756184
PRIDE:Q5SZQ8 Ensembl:ENST00000290583 GeneID:11189 KEGG:hsa:11189
UCSC:uc001eyr.3 UCSC:uc001eys.2 UCSC:uc009wmx.2
GeneCards:GC01M151674 HGNC:HGNC:11967 HPA:HPA006292 MIM:612678
neXtProt:NX_Q5SZQ8 PharmGKB:PA36654 PhylomeDB:Q5SZQ8
EvolutionaryTrace:Q5SZQ8 GenomeRNAi:11189 NextBio:42591
ArrayExpress:Q5SZQ8 Bgee:Q5SZQ8 CleanEx:HS_TNRC4
Genevestigator:Q5SZQ8 Uniprot:Q5SZQ8
Length = 465
Score = 144 (55.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 45/151 (29%), Positives = 63/151 (41%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 295 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 350
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P + E +GC+I++ +L T +E+ + F FG
Sbjct: 351 AQQP------PPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 404
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
+ V V R+ Q CFGFV+F+ P S Q
Sbjct: 405 HVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435
>UNIPROTKB|Q08E07 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9913
"Bos taurus" [GO:0048026 "positive regulation of mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0007283
GO:GO:0003723 GO:GO:0030317 HOVERGEN:HBG107646 KO:K13207
GO:GO:0048026 eggNOG:NOG251494 HOGENOM:HOG000004754
GeneTree:ENSGT00560000076837 EMBL:BC123480 IPI:IPI00690976
RefSeq:NP_001070313.1 UniGene:Bt.18201 ProteinModelPortal:Q08E07
SMR:Q08E07 PRIDE:Q08E07 Ensembl:ENSBTAT00000033848 GeneID:513347
KEGG:bta:513347 CTD:11189 InParanoid:Q08E07 OMA:HSAYLNP
NextBio:20870823 ArrayExpress:Q08E07 GO:GO:0000381 Uniprot:Q08E07
Length = 461
Score = 143 (55.4 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 47/151 (31%), Positives = 66/151 (43%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA M+ Y AAY A P PP
Sbjct: 295 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAG----MQHYTAYPAAYSLVAPAFPQPPALV 349
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P P+ + E +GC+I++ +L T +E+ + F FG
Sbjct: 350 AQQP----PPP-PQQQQQQQ----QQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 400
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
+ V V R+ Q CFGFV+F+ P S Q
Sbjct: 401 HVISAKVFVDRATNQSKCFGFVSFDNPASAQ 431
>RGD|1563168 [details] [associations]
symbol:Celf3 "CUGBP, Elav-like family member 3" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0030317
"sperm motility" evidence=ISO] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1563168 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0030317
GO:GO:0048026 GeneTree:ENSGT00560000076837 GO:GO:0000381
OrthoDB:EOG4RJG30 EMBL:AC133978 IPI:IPI00204869
ProteinModelPortal:D4A916 Ensembl:ENSRNOT00000028324
UCSC:RGD:1563168 Uniprot:D4A916
Length = 494
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/143 (30%), Positives = 63/143 (44%)
Query: 216 VHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAK 275
V S +P A D P +++YA + Y AAY A P PP Q P
Sbjct: 331 VMLSAAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALVAQQP---- 382
Query: 276 PAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQ 335
P P P+ + + +GC+I++ +L T +E+ + F FG + V
Sbjct: 383 PPP-PQQQQQQQQQQQQQQQQQQRPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVF 441
Query: 336 V-RSNKQGYCFGFVAFETPGSVQ 357
V R+ Q CFGFV+F+ P S Q
Sbjct: 442 VDRATNQSKCFGFVSFDNPASAQ 464
>UNIPROTKB|H0Y623 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OMA:HSAYLNP
EMBL:AL589765 HGNC:HGNC:11967 ProteinModelPortal:H0Y623
PRIDE:H0Y623 Ensembl:ENST00000420342 Bgee:H0Y623 Uniprot:H0Y623
Length = 466
Score = 144 (55.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 45/151 (29%), Positives = 63/151 (41%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 296 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 351
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P + E +GC+I++ +L T +E+ + F FG
Sbjct: 352 AQQP------PPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 405
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
+ V V R+ Q CFGFV+F+ P S Q
Sbjct: 406 HVISAKVFVDRATNQSKCFGFVSFDNPASAQ 436
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 77 EIKTADAQDSYEKGVIVLVTGCLTGKDNVKKKF 109
++K AD++ ++ + V + G ++V+K F
Sbjct: 84 QVKPADSESRGDRKLFVGMLGKQQTDEDVRKMF 116
>UNIPROTKB|E2RGA8 [details] [associations]
symbol:CELF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 OMA:HSAYLNP EMBL:AAEX03011056
Ensembl:ENSCAFT00000020318 Uniprot:E2RGA8
Length = 539
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/151 (30%), Positives = 65/151 (43%)
Query: 208 PSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNAD 267
P N VH +P A D P +++YA + Y AAY A P PP
Sbjct: 372 PDALYPNGVHPYPAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALV 427
Query: 268 QQSPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFG 327
Q P P P P+ + E +GC+I++ +L T +E+ + F FG
Sbjct: 428 AQQP----PPP-PQQQQQQQ----QQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFG 478
Query: 328 PIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
+ V V R+ Q CFGFV+F+ P S Q
Sbjct: 479 HVISAKVFVDRATNQSKCFGFVSFDNPASAQ 509
>UNIPROTKB|Q5SZQ7 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH471121
HOVERGEN:HBG107646 KO:K13207 HOGENOM:HOG000004754 CTD:11189
EMBL:AL589765 UniGene:Hs.26047 PDB:2DNO PDBsum:2DNO GeneID:11189
KEGG:hsa:11189 HGNC:HGNC:11967 PharmGKB:PA36654 GenomeRNAi:11189
NextBio:42591 IPI:IPI00386736 RefSeq:NP_001166120.1 SMR:Q5SZQ7
STRING:Q5SZQ7 Ensembl:ENST00000290585 UCSC:uc009wmy.3
EvolutionaryTrace:Q5SZQ7 Uniprot:Q5SZQ7
Length = 415
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 42/147 (28%), Positives = 62/147 (42%)
Query: 212 VQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSP 271
+ + S +P A D P +++YA + Y AAY A P PP Q P
Sbjct: 249 IATPITPSSAQSPAAPVD-PLQQAYAGMQHYTAAY---PAAYSLVAPAFPQPPALVAQQP 304
Query: 272 AMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKK 331
P P + E +GC+I++ +L T +E+ + F FG +
Sbjct: 305 ------PPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVIS 358
Query: 332 NGVQV-RSNKQGYCFGFVAFETPGSVQ 357
V V R+ Q CFGFV+F+ P S Q
Sbjct: 359 AKVFVDRATNQSKCFGFVSFDNPASAQ 385
>UNIPROTKB|D6RBM9 [details] [associations]
symbol:G3BP2 "Ras GTPase-activating protein-binding protein
2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR002075 Pfam:PF02136 GO:GO:0006810 GO:GO:0005622
InterPro:IPR018222 PROSITE:PS50177 HGNC:HGNC:30291 EMBL:AC104828
IPI:IPI01019015 ProteinModelPortal:D6RBM9 SMR:D6RBM9
Ensembl:ENST00000509561 ArrayExpress:D6RBM9 Bgee:D6RBM9
Uniprot:D6RBM9
Length = 78
Score = 110 (43.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 10 PSAQVVGNAFVEQYYHILHQSPGLVHRFY-QDSSLL-SRPDSNGS-MTTVTTMKAINDRI 66
PS +VG FV QYY +L+++P +HRFY ++SS + D++G V I+ ++
Sbjct: 6 PSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKV 65
Query: 67 LSLNYEDYTAEIK 79
LSLN+ + +I+
Sbjct: 66 LSLNFSECHTKIR 78
>SGD|S000005334 [details] [associations]
symbol:BRE5 "Ubiquitin protease cofactor" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016579 "protein deubiquitination" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0034517 "ribophagy" evidence=IMP] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002075
Pfam:PF02136 PROSITE:PS50102 SMART:SM00360 SGD:S000005334
GO:GO:0005737 GO:GO:0006810 EMBL:BK006947 GO:GO:0003723
GO:GO:0060628 GO:GO:0016579 EMBL:Z71666 EMBL:AY692784 EMBL:M88607
PIR:S63382 RefSeq:NP_014449.1 PDB:1ZX2 PDB:2QIY PDBsum:1ZX2
PDBsum:2QIY ProteinModelPortal:P53741 SMR:P53741 DIP:DIP-4254N
IntAct:P53741 MINT:MINT-483528 STRING:P53741 PaxDb:P53741
PeptideAtlas:P53741 EnsemblFungi:YNR051C GeneID:855787
KEGG:sce:YNR051C CYGD:YNR051c eggNOG:NOG311655 HOGENOM:HOG000057133
OMA:YPIYIRG OrthoDB:EOG4N33ZJ EvolutionaryTrace:P53741
NextBio:980268 Genevestigator:P53741 GermOnline:YNR051C
GO:GO:2000156 GO:GO:0034517 InterPro:IPR018222 PROSITE:PS50177
Uniprot:P53741
Length = 515
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/302 (21%), Positives = 116/302 (38%)
Query: 18 AFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTT----------VTTMKAINDRIL 67
AF++ YY + P + FY ++ L+ + T VT + IN +
Sbjct: 11 AFLQNYYERMRTDPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENIN-KFF 69
Query: 68 SLN---YEDYTAEIKTADAQDS--YEKGVIVLVTGCLTGKDNVKKKFTQTFFLAPQDKGG 122
S N ++ T D Q + K ++++ TG + KF QTF L P G
Sbjct: 70 SRNDAKVRSLKLKLDTIDFQYTGHLHKSILIMATGEMFWTGTPVYKFCQTFILLPSSNGS 129
Query: 123 YF-VLNDVFRFXXXXXXXXXXXXXXXXXTAPTANVTEAPEPAHDQDHIPADRAIVIEGED 181
F + ND+ RF + +V+ A ++D I + + E E
Sbjct: 130 TFDITNDIIRFISNSFKPYVLTDASLSQSNEENSVS-----AVEEDKIRHESGVEKEKEK 184
Query: 182 LDNGPEVCDPSDKEEGSVVEDEIVEPPSNSVQNEV--HASVDSAPVAQGDAPEKKSYASI 239
+ PE+ P K+E V+D S++ + + H+ + PV + ++ S
Sbjct: 185 -EKSPEISKPKAKKE--TVKDTTAPTESSTQEKPIVDHSQPRAIPVTKESKIHTETVPSS 241
Query: 240 VKVM-KGYNISSAAYVPARKARPTPPNADQQS-PAMAKPAPVPEASALSSDGAPENSNVN 297
K K +S+ K A++++ P K V +A+++ P V+
Sbjct: 242 TKGNHKQDEVSTEELGNVTKLNEKSHKAEKKAAPIKTKEGSVEAINAVNNSSLPNGKEVS 301
Query: 298 EE 299
+E
Sbjct: 302 DE 303
>UNIPROTKB|B4DQL3 [details] [associations]
symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG107646
HOGENOM:HOG000004754 EMBL:AL589765 UniGene:Hs.26047 HGNC:HGNC:11967
EMBL:AK298852 IPI:IPI00909704 SMR:B4DQL3 STRING:B4DQL3
Ensembl:ENST00000392706 UCSC:uc010pdh.2 Uniprot:B4DQL3
Length = 260
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 251 AAYVPARKARPTPPNADQQSPAM-AKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRN 309
AAY PA + P A Q PA+ A+ P P + E +GC+I++ +
Sbjct: 125 AAY-PAAYSLVAP--AFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYH 181
Query: 310 LAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
L T +E+ + F FG + V V R+ Q CFGFV+F+ P S Q
Sbjct: 182 LPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 230
>UNIPROTKB|G4MRZ3 [details] [associations]
symbol:MGG_02479 "Nuclear transport factor 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002075 Pfam:PF02136
GO:GO:0005635 GO:GO:0006606 EMBL:CM001231 InterPro:IPR018222
PROSITE:PS50177 RefSeq:XP_003709274.1 ProteinModelPortal:G4MRZ3
EnsemblFungi:MGG_02479T0 GeneID:2681576 KEGG:mgr:MGG_02479
Uniprot:G4MRZ3
Length = 126
Score = 105 (42.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 36/124 (29%), Positives = 55/124 (44%)
Query: 13 QVVGNAFVEQYYHILHQS----PGLVHRFYQDSSLLSRPDSNGSMTTVTTMKAINDRILS 68
Q V FV+ YY + + Y D S+L+ + T AI +++
Sbjct: 5 QAVATEFVQFYYSEFDKGREARAAWSNLVYTDQSVLTFESTEHRGKT-----AIAEKLSG 59
Query: 69 LNYEDYTAEIKTADAQDSYEKGVIVLVTG-CLTGKDNVKKKFTQTFFLAPQDKGGYFVLN 127
L +E ++ T D Q + G+I+LVTG L ++ F+Q F L D Y LN
Sbjct: 60 LPFEVVKHQVSTLDVQTTVHDGIIILVTGQLLVDEEQRPMNFSQVFQLLKADDRWY-ALN 118
Query: 128 DVFR 131
DVF+
Sbjct: 119 DVFK 122
>UNIPROTKB|Q7ZWM3 [details] [associations]
symbol:tnrc4-b "CUGBP Elav-like family member 3-B"
species:8355 "Xenopus laevis" [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879 HOVERGEN:HBG107646
KO:K13207 GO:GO:0048026 EMBL:BC046942 RefSeq:NP_001080695.1
UniGene:Xl.12160 ProteinModelPortal:Q7ZWM3 SMR:Q7ZWM3 GeneID:380387
KEGG:xla:380387 CTD:380387 Xenbase:XB-GENE-5796640 Uniprot:Q7ZWM3
Length = 462
Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 270 SPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPI 329
SPA +P P A+ + P+ E EGC+I++ +L T +E+ + F FG +
Sbjct: 350 SPAFTQP---P---AILTQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNV 403
Query: 330 KKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
V V R+ Q CFGFV+F+ PGS Q
Sbjct: 404 ISAKVFVDRATNQSKCFGFVSFDNPGSAQ 432
>UNIPROTKB|Q91579 [details] [associations]
symbol:tnrc4-a "CUGBP Elav-like family member 3-A"
species:8355 "Xenopus laevis" [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:U16800 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:BC057704 EMBL:BC072134
RefSeq:NP_001079936.1 UniGene:Xl.986 HSSP:Q92879
ProteinModelPortal:Q91579 SMR:Q91579 GeneID:379627 KEGG:xla:379627
CTD:379627 Xenbase:XB-GENE-6255196 HOVERGEN:HBG107646 KO:K13207
GO:GO:0048026 Uniprot:Q91579
Length = 462
Score = 126 (49.4 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 32/89 (35%), Positives = 46/89 (51%)
Query: 270 SPAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPI 329
SPA +P P A+ P+ E EGC+I++ +L T +E+ + F FG +
Sbjct: 350 SPAFTQP---P---AILQQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNV 403
Query: 330 KKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
V V R+ Q CFGFV+F+ PGS Q
Sbjct: 404 ISAKVFVDRATNQSKCFGFVSFDNPGSAQ 432
>ZFIN|ZDB-GENE-000501-2 [details] [associations]
symbol:celf3a "cugbp, Elav-like family member 3a"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-000501-2 GO:GO:0005634 GO:GO:0005737
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026
eggNOG:NOG251494 HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837
EMBL:AB032725 EMBL:BX248499 EMBL:BC060923 IPI:IPI00504951
RefSeq:NP_571569.2 UniGene:Dr.8323 ProteinModelPortal:Q9IBD1
SMR:Q9IBD1 Ensembl:ENSDART00000039629 GeneID:57922 KEGG:dre:57922
CTD:57922 OMA:MQHYTAT OrthoDB:EOG4RJG30 NextBio:20891938
Bgee:Q9IBD1 Uniprot:Q9IBD1
Length = 452
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 43/156 (27%), Positives = 67/156 (42%)
Query: 207 PPSNSVQNEVHASVDSAPVAQGDAPEKKSYASIVKVMKGYNISSAAYVPARKARPTPPNA 266
PP +V + + V +AP G + + Y + V Y S A P ++A +
Sbjct: 274 PPPIAVNS--YPPVPAAP--NGQSASEALYTNGVHP---YQAQSPALDPLQQAYTGMQHY 326
Query: 267 DQQSPA----MAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEA 322
PA + +P P P+ E EGC+I++ +L T +E+ +
Sbjct: 327 TATYPAAYGLVGQPFPHQPTLVAQQPQQPQQLQQREGPEGCNIFIYHLPQEFTDSEMLQM 386
Query: 323 FKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
F FG + V V R+ Q CFGFV+F+ P S Q
Sbjct: 387 FLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQ 422
>CGD|CAL0001254 [details] [associations]
symbol:orf19.1086 species:5476 "Candida albicans" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0034517 "ribophagy" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:2000156
"regulation of retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR000504
InterPro:IPR002075 Pfam:PF02136 PROSITE:PS50102 SMART:SM00360
CGD:CAL0001254 GO:GO:0006810 GO:GO:0003676 GO:GO:0005622
EMBL:AACQ01000168 InterPro:IPR018222 PROSITE:PS50177
RefSeq:XP_712099.1 ProteinModelPortal:Q59QZ9 GeneID:3646280
KEGG:cal:CaO19.1086 Uniprot:Q59QZ9
Length = 622
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 78 IKTADAQDSYEKGVIVLVTGCLTGKDNVKKKFTQTFFLAP-QDKGGYFVLNDVFRF 132
I +A + S EK +I++V G + D K+FTQTF L P + Y V ND+ +F
Sbjct: 144 ITSACFEVSLEKNIIIVVFGEWSSNDEPYKQFTQTFVLVPGKTDNTYDVANDILKF 199
Score = 63 (27.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 29/117 (24%), Positives = 47/117 (40%)
Query: 177 IEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSN--SVQNEVHASVDSAPVAQGDAPEKK 234
++ E+ + E +DKE + +D+ V SN SV + +S PV + K+
Sbjct: 305 VKVENQEEKQEKISNTDKE---LTKDDSVNKQSNESSVTTTTSTTQNSKPVVTKNEESKE 361
Query: 235 SYASIVKVMKGYNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAP 291
A K + V + PT PNA +P + P+ A AL+ P
Sbjct: 362 EKAPSTK-----EETKQPTVKKPQPEPTKPNAAAAAPPQQQQQPLTWA-ALAQQAVP 412
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 23/95 (24%), Positives = 40/95 (42%)
Query: 6 GSPAPSA-QV---------VGNAFVEQYYHILHQSPGLVHRFYQDSSLLSRPDSNGSMTT 55
G+P PSA QV +G F++ YY +H+ Y + ++ G+
Sbjct: 40 GTPKPSATQVQLSQDRASNIGWFFIKSYYDFFISKLDEIHKIYHPHASINHDAFPGTKND 99
Query: 56 VTTMKAINDRILSLNYEDYTAEIKTADA-QDSYEK 89
+ A ND + + Y A K DA ++++ K
Sbjct: 100 KSDSGASNDNVKDVLPIAYKA--KGTDAIKETFSK 132
>UNIPROTKB|Q9Y4C8 [details] [associations]
symbol:RBM19 "Probable RNA-binding protein 19" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISS;IDA] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0007275 GO:GO:0005737 GO:GO:0005694
GO:GO:0005654 GO:GO:0005730 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 GO:GO:0040019 eggNOG:COG0724 KO:K14787
HOGENOM:HOG000211156 OMA:VFREKNV EMBL:AB014582 EMBL:AL117547
EMBL:AC009731 EMBL:AC073863 EMBL:AC090669 EMBL:BC004289
EMBL:BC006137 IPI:IPI00000686 PIR:T17297 RefSeq:NP_001140170.1
RefSeq:NP_001140171.1 RefSeq:NP_057280.2 UniGene:Hs.7482 PDB:2DGW
PDBsum:2DGW ProteinModelPortal:Q9Y4C8 SMR:Q9Y4C8 MINT:MINT-1196129
STRING:Q9Y4C8 PhosphoSite:Q9Y4C8 DMDM:308153566 SWISS-2DPAGE:Q9Y4C8
PaxDb:Q9Y4C8 PRIDE:Q9Y4C8 DNASU:9904 Ensembl:ENST00000261741
Ensembl:ENST00000392561 Ensembl:ENST00000545145 GeneID:9904
KEGG:hsa:9904 UCSC:uc001tvm.3 CTD:9904 GeneCards:GC12M114259
HGNC:HGNC:29098 HPA:HPA038860 neXtProt:NX_Q9Y4C8
PharmGKB:PA134886784 HOVERGEN:HBG055637 InParanoid:Q9Y4C8
OrthoDB:EOG4D7Z56 PhylomeDB:Q9Y4C8 ChiTaRS:RBM19
EvolutionaryTrace:Q9Y4C8 GenomeRNAi:9904 NextBio:37345 Bgee:Q9Y4C8
CleanEx:HS_RBM19 Genevestigator:Q9Y4C8 GermOnline:ENSG00000122965
Uniprot:Q9Y4C8
Length = 960
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 35/119 (29%), Positives = 54/119 (45%)
Query: 257 RKARPTPPNADQQSPAMAKPAP---VPEASALSSDGAPENSNVNEEAE-----------G 302
+K + TP ++ PA + P PE + +GA +S EE E G
Sbjct: 670 KKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPG 729
Query: 303 CSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYC----FGFVAFETPGSVQ 357
C+++++NL F TT +L+E F G +K + + NK G FGFV + P Q
Sbjct: 730 CTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQ 788
>UNIPROTKB|K7EJD7 [details] [associations]
symbol:CELF4 "CUGBP Elav-like family member 4" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Gene3D:3.30.70.330 HGNC:HGNC:14015 EMBL:AC015961 EMBL:AC090386
EMBL:AC093332 EMBL:AC129908 Ensembl:ENST00000589386 Uniprot:K7EJD7
Length = 185
Score = 112 (44.5 bits), Expect = 0.00021, P = 0.00021
Identities = 37/113 (32%), Positives = 53/113 (46%)
Query: 255 PARKARPTPPNADQQSPA----MAKPAPVPEASALSSDGAPENSNV-----NEEAEGCSI 305
PA+ PT + QQ+ A A PA P A S P+ + E EGC++
Sbjct: 59 PAQS--PTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNL 116
Query: 306 YVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
++ +L EL + F FG + + V V R+ Q CFGFV+F+ P S Q
Sbjct: 117 FIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQ 169
>UNIPROTKB|F1NEC5 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0040019 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:AADN02050416 IPI:IPI00586587
Ensembl:ENSGALT00000037991 Uniprot:F1NEC5
Length = 945
Score = 116 (45.9 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 281 EASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNK 340
E ++ + E + E GC+++++NL FTTT L+E F G +K + + +K
Sbjct: 695 EETSAQDEEEDEEEDEEESIPGCTLFIKNLNFTTTEGTLKETFSKVGAVKSCTISKKKDK 754
Query: 341 QGYC----FGFVAFETPGSVQ 357
G FGFV ++ P S Q
Sbjct: 755 AGTLLSMGFGFVEYKKPESAQ 775
Score = 53 (23.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 37/161 (22%), Positives = 61/161 (37%)
Query: 151 APTANVTEAPEPAHDQDHIPADRAIVIEGEDLDNGPEVCDPSDKEEGSVVEDEIVEPPSN 210
A AN A EP ++ AD E D E D + E +++ +
Sbjct: 151 ATWANDALAEEPKKEKSKPVADYLNFDSDESEDLSEEEKDGRESSEAKKQQEKKAATRED 210
Query: 211 -SVQNEVHASV--DSAPVAQGDAPEKKSYASIVKVMKGYN---ISSAAYVPARKARPTPP 264
S + + + V DS+ + E+ Y + + K I+ +K R + P
Sbjct: 211 LSDMDYLKSKVVKDSSSYSSSSTEEETDYEEVEEESKNEEDSGITENIDTHTKKRRKSKP 270
Query: 265 N-ADQQSPAMAKPAPVPEASALSSD-----GAPENSNVNEE 299
A+Q++PA + V A A + GAP NV E+
Sbjct: 271 QEAEQETPAEKQKNQVSSAEASTPHTVKLRGAP--LNVTEQ 309
>UNIPROTKB|B4E241 [details] [associations]
symbol:SFRS3 "Splicing factor, arginine/serine-rich 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 EMBL:CH471081 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:Z85986 OrthoDB:EOG4VDQ12
UniGene:Hs.405144 HGNC:HGNC:10785 ChiTaRS:SRSF3 EMBL:AK304097
IPI:IPI00843996 SMR:B4E241 STRING:B4E241 Ensembl:ENST00000339436
Ensembl:ENST00000477442 UCSC:uc011dtp.1 HOGENOM:HOG000208722
HOVERGEN:HBG104956 Uniprot:B4E241
Length = 124
Score = 96 (38.9 bits), Expect = 0.00035, P = 0.00035
Identities = 23/51 (45%), Positives = 27/51 (52%)
Query: 303 CSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQVRSNKQGYCFGFVAFETP 353
C +YV NL TELE AF +GP++ V V N G F FV FE P
Sbjct: 10 CKVYVGNLGNNGNKTELERAFGYYGPLRS--VWVARNPPG--FAFVEFEDP 56
>UNIPROTKB|E2RJG5 [details] [associations]
symbol:CELF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 OMA:MQHVAAF EMBL:AAEX03016277
EMBL:AAEX03016278 Ensembl:ENSCAFT00000028069 Uniprot:E2RJG5
Length = 427
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 38/118 (32%), Positives = 52/118 (44%)
Query: 246 YNISSAAYVPARKARPTPPNADQQSPAMAKPAPVPEASALSSDGAPENSNV-----NEEA 300
YN + Y PA+ P Q M A P A A S P+ S+ E
Sbjct: 282 YNNGLSPY-PAQSPGVADP-LQQAYAGMHHYAAYPSAYAPVSTAFPQQSSALPQQQREGP 339
Query: 301 EGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
EGC++++ +L EL + F FG + V V R+ Q CFGFV+F+ P S Q
Sbjct: 340 EGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQ 397
>ZFIN|ZDB-GENE-040718-300 [details] [associations]
symbol:celf4 "CUGBP, Elav-like family member 4"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-040718-300 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879
HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026 eggNOG:NOG251494
HOGENOM:HOG000004754 OrthoDB:EOG4RJG30 EMBL:BC076238
IPI:IPI00491989 RefSeq:NP_001002562.1 UniGene:Dr.81398
ProteinModelPortal:Q6DGV1 SMR:Q6DGV1 GeneID:436835 KEGG:dre:436835
CTD:56853 InParanoid:Q6DGV1 NextBio:20831267 ArrayExpress:Q6DGV1
Bgee:Q6DGV1 Uniprot:Q6DGV1
Length = 520
Score = 117 (46.2 bits), Expect = 0.00066, P = 0.00066
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 246 YNISSAAYVPARKARPTPPNAD--QQSPA-MAKPAPVPEASALSSDGAPENSNV-----N 297
+ + + ++ + +P AD QQ+ A + + A P A S P+ +
Sbjct: 370 FGVQGSCFLSSLSEAQSPTAADPLQQAYAGVQQYAAFPAAYGQISQAFPQPPPIIPQQQR 429
Query: 298 EEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV-RSNKQGYCFGFVAFETPGSV 356
E EGC++++ +L EL + F FG + + V V R+ Q CFGFV+F+ PGS
Sbjct: 430 EGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPGSA 489
Query: 357 Q 357
Q
Sbjct: 490 Q 490
>UNIPROTKB|F1S8E8 [details] [associations]
symbol:CELF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00560000076837 OMA:DGMKDLD EMBL:FP016150
EMBL:FP565386 Ensembl:ENSSSCT00000014721 Uniprot:F1S8E8
Length = 420
Score = 115 (45.5 bits), Expect = 0.00080, P = 0.00080
Identities = 42/141 (29%), Positives = 60/141 (42%)
Query: 230 APEKKSYASIVKVMKGYNISSAAY----VPARKARPT------PP-NADQQSPAMAKPAP 278
AP +A +V G+ Y VP PT P + QQ AM A
Sbjct: 250 APITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 309
Query: 279 V-PEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV- 336
+ P A ++ E EGC++++ +L TEL + F FG I + V +
Sbjct: 310 ITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 369
Query: 337 RSNKQGYCFGFVAFETPGSVQ 357
R+ Q CFGFV+F+ P S Q
Sbjct: 370 RATNQSKCFGFVSFDNPASAQ 390
>UNIPROTKB|F1RKD1 [details] [associations]
symbol:RBM19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0040019 OMA:VFREKNV
GeneTree:ENSGT00700000104575 EMBL:CT971483
Ensembl:ENSSSCT00000010816 Uniprot:F1RKD1
Length = 965
Score = 119 (46.9 bits), Expect = 0.00089, P = 0.00089
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 264 PNADQQSPAMAKPAP--VPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEE 321
P ++P + KP ASA + E E GC+++++NL F+TT L+
Sbjct: 694 PMPGGETPEVEKPTEGGADAASAKVEEEEEEEEEEEESLPGCTLFIKNLNFSTTEETLKG 753
Query: 322 AFKIFGPIKKNGVQVRSNKQGYC----FGFVAFETPGSVQ 357
F G +K + + NK G FGFV ++ P Q
Sbjct: 754 VFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYKKPEQAQ 793
>MGI|MGI:1923433 [details] [associations]
symbol:Celf6 "CUGBP, Elav-like family member 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1923433 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879
HOVERGEN:HBG107646 KO:K13207 eggNOG:NOG251494 HOGENOM:HOG000004754
GeneTree:ENSGT00560000076837 GO:GO:0000381 OrthoDB:EOG4RJG30
CTD:60677 EMBL:AK034216 EMBL:BC052406 EMBL:BC057083 IPI:IPI00222250
IPI:IPI00853853 RefSeq:NP_780444.2 UniGene:Mm.265415
ProteinModelPortal:Q7TN33 SMR:Q7TN33 PhosphoSite:Q7TN33
PRIDE:Q7TN33 Ensembl:ENSMUST00000034840 Ensembl:ENSMUST00000121266
GeneID:76183 KEGG:mmu:76183 UCSC:uc009pxx.1 UCSC:uc009pxy.1
NextBio:344727 Bgee:Q7TN33 CleanEx:MM_BRUNOL6 Genevestigator:Q7TN33
Uniprot:Q7TN33
Length = 460
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 29/88 (32%), Positives = 42/88 (47%)
Query: 271 PAMAKPAPVPEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIK 330
PA A P ++A S + E EGC++++ +L EL + F FG +
Sbjct: 343 PAAYPSAYAPASTAFSQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVV 402
Query: 331 KNGVQV-RSNKQGYCFGFVAFETPGSVQ 357
V V R+ Q CFGFV+F+ P S Q
Sbjct: 403 SAKVFVDRATNQSKCFGFVSFDNPTSAQ 430
>UNIPROTKB|F1PXQ8 [details] [associations]
symbol:CELF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13207
GeneTree:ENSGT00560000076837 CTD:60680 OMA:DGMKDLD
EMBL:AAEX03012581 RefSeq:XP_854891.3 Ensembl:ENSCAFT00000030591
GeneID:612072 KEGG:cfa:612072 Uniprot:F1PXQ8
Length = 485
Score = 115 (45.5 bits), Expect = 0.0010, P = 0.00099
Identities = 42/141 (29%), Positives = 60/141 (42%)
Query: 230 APEKKSYASIVKVMKGYNISSAAY----VPARKARPT------PP-NADQQSPAMAKPAP 278
AP +A +V G+ Y VP PT P + QQ AM A
Sbjct: 315 APITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 374
Query: 279 V-PEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV- 336
+ P A ++ E EGC++++ +L TEL + F FG I + V +
Sbjct: 375 ITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 434
Query: 337 RSNKQGYCFGFVAFETPGSVQ 357
R+ Q CFGFV+F+ P S Q
Sbjct: 435 RATNQSKCFGFVSFDNPASAQ 455
>UNIPROTKB|Q8N6W0 [details] [associations]
symbol:CELF5 "CUGBP Elav-like family member 5" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471139 HOVERGEN:HBG107646
KO:K13207 eggNOG:NOG251494 OrthoDB:EOG4RJG30 EMBL:AB209067
EMBL:AC005331 EMBL:AC006505 EMBL:AC010649 EMBL:AC123911
EMBL:BC028101 EMBL:AF329266 EMBL:AF248649 IPI:IPI00171157
IPI:IPI00853054 RefSeq:NP_001166144.1 RefSeq:NP_068757.2
UniGene:Hs.655747 PDB:2DNH PDBsum:2DNH ProteinModelPortal:Q8N6W0
SMR:Q8N6W0 STRING:Q8N6W0 PhosphoSite:Q8N6W0 DMDM:74762534
PRIDE:Q8N6W0 DNASU:60680 Ensembl:ENST00000292672
Ensembl:ENST00000541430 GeneID:60680 KEGG:hsa:60680 UCSC:uc002lxl.2
UCSC:uc010dtj.2 CTD:60680 GeneCards:GC19P003224 HGNC:HGNC:14058
HPA:HPA042012 MIM:612680 neXtProt:NX_Q8N6W0 PharmGKB:PA25429
InParanoid:Q8N6W0 OMA:DGMKDLD PhylomeDB:Q8N6W0
EvolutionaryTrace:Q8N6W0 GenomeRNAi:60680 NextBio:65500
ArrayExpress:Q8N6W0 Bgee:Q8N6W0 CleanEx:HS_BRUNOL5
Genevestigator:Q8N6W0 Uniprot:Q8N6W0
Length = 485
Score = 115 (45.5 bits), Expect = 0.0010, P = 0.00099
Identities = 42/141 (29%), Positives = 60/141 (42%)
Query: 230 APEKKSYASIVKVMKGYNISSAAY----VPARKARPT------PP-NADQQSPAMAKPAP 278
AP +A +V G+ Y VP PT P + QQ AM A
Sbjct: 315 APITNGFAGVVPFPGGHPALETVYANGLVPYPAQSPTVAETLHPAFSGVQQYTAMYPTAA 374
Query: 279 V-PEASALSSDGAPENSNVNEEAEGCSIYVRNLAFTTTSTELEEAFKIFGPIKKNGVQV- 336
+ P A ++ E EGC++++ +L TEL + F FG I + V +
Sbjct: 375 ITPIAHSVPQPPPLLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMD 434
Query: 337 RSNKQGYCFGFVAFETPGSVQ 357
R+ Q CFGFV+F+ P S Q
Sbjct: 435 RATNQSKCFGFVSFDNPASAQ 455
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.130 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 402 366 0.00084 117 3 11 23 0.47 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 587 (62 KB)
Total size of DFA: 216 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.73u 0.19s 39.92t Elapsed: 00:00:02
Total cpu time: 39.74u 0.19s 39.93t Elapsed: 00:00:02
Start: Mon May 20 16:44:01 2013 End: Mon May 20 16:44:03 2013