Query 015697
Match_columns 402
No_of_seqs 266 out of 1413
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 17:06:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1csh_A Citrate synthase; lyase 100.0 5E-101 2E-105 788.7 38.7 365 38-402 2-367 (435)
2 3hwk_A Methylcitrate synthase; 100.0 3.6E-84 1.2E-88 658.5 33.7 312 54-393 25-345 (414)
3 2ibp_A Citrate synthase; disul 100.0 5.4E-83 1.9E-87 650.7 30.5 318 61-398 9-340 (409)
4 3msu_A Citrate synthase; helix 100.0 2.2E-82 7.4E-87 647.7 29.4 295 67-392 46-354 (427)
5 3tqg_A 2-methylcitrate synthas 100.0 1.1E-81 3.6E-86 634.6 28.2 293 69-393 4-303 (375)
6 2h12_A Citrate synthase; acido 100.0 3.6E-81 1.2E-85 641.4 31.9 304 55-391 38-356 (436)
7 3o8j_A 2-methylcitrate synthas 100.0 2.7E-81 9.3E-86 636.2 29.6 304 63-392 18-331 (404)
8 3l96_A Citrate synthase; quate 100.0 8.4E-82 2.9E-86 643.6 23.2 304 55-392 31-348 (426)
9 2p2w_A Citrate synthase; trans 100.0 8.2E-81 2.8E-85 627.5 29.8 289 74-393 1-290 (367)
10 1a59_A Citrate synthase; cold- 100.0 5.4E-80 1.8E-84 624.1 30.9 299 75-393 5-312 (378)
11 2c6x_A Citrate synthase 1; tri 100.0 9.8E-80 3.3E-84 618.6 32.4 289 76-395 2-293 (363)
12 2ifc_A Citrate synthase; oxalo 100.0 7.9E-80 2.7E-84 623.8 31.6 297 75-398 7-312 (385)
13 1vgm_A 378AA long hypothetical 100.0 1E-79 3.6E-84 621.5 31.8 294 77-398 7-308 (378)
14 1o7x_A Citrate synthase; lyase 100.0 1.2E-79 4E-84 621.0 32.1 293 77-397 6-306 (377)
15 1iom_A Citrate synthase; open 100.0 2.2E-79 7.5E-84 619.0 33.2 290 77-392 5-300 (377)
16 1aj8_A Citrate synthase; hyper 100.0 2.3E-79 7.9E-84 617.7 31.4 290 76-392 2-295 (371)
17 1vgp_A 373AA long hypothetical 100.0 4.9E-79 1.7E-83 615.9 31.0 289 75-393 3-299 (373)
18 3tqg_A 2-methylcitrate synthas 65.1 17 0.00058 36.2 8.1 61 121-183 153-217 (375)
19 3hwk_A Methylcitrate synthase; 58.1 19 0.00064 36.4 7.0 61 121-183 195-259 (414)
20 3o8j_A 2-methylcitrate synthas 57.1 32 0.0011 34.6 8.5 61 121-183 182-246 (404)
21 1a59_A Citrate synthase; cold- 56.7 32 0.0011 34.1 8.4 61 122-182 154-216 (378)
22 2ifc_A Citrate synthase; oxalo 56.6 33 0.0011 34.2 8.5 62 122-183 156-219 (385)
23 1aj8_A Citrate synthase; hyper 56.3 33 0.0011 34.0 8.4 62 122-183 151-214 (371)
24 1iom_A Citrate synthase; open 56.3 33 0.0011 34.1 8.4 62 122-183 152-215 (377)
25 1vgp_A 373AA long hypothetical 54.6 36 0.0012 33.8 8.3 62 122-183 148-211 (373)
26 2ibp_A Citrate synthase; disul 54.5 37 0.0013 34.1 8.5 62 122-183 182-245 (409)
27 1vgm_A 378AA long hypothetical 54.3 39 0.0013 33.6 8.5 62 122-183 152-215 (378)
28 2c6x_A Citrate synthase 1; tri 45.6 48 0.0016 32.7 7.5 62 122-183 145-208 (363)
29 3u5c_P 40S ribosomal protein S 40.2 11 0.00038 32.6 1.7 22 98-129 15-36 (142)
30 1o7x_A Citrate synthase; lyase 39.2 74 0.0025 31.5 7.8 60 122-183 151-214 (377)
31 3j20_T 30S ribosomal protein S 39.1 11 0.00037 32.3 1.4 22 98-129 6-27 (132)
32 2xzm_S RPS15E; ribosome, trans 35.4 13 0.00045 32.2 1.4 13 98-110 11-23 (144)
33 2qsr_A Transcription-repair co 32.6 38 0.0013 29.8 4.1 50 127-184 29-82 (173)
34 4ay7_A Methylcobalamin\: coenz 27.8 53 0.0018 31.5 4.5 44 330-373 302-346 (348)
35 3iz6_R 40S ribosomal protein S 27.0 13 0.00046 32.5 0.0 22 98-129 24-45 (154)
No 1
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=5e-101 Score=788.67 Aligned_cols=365 Identities=59% Similarity=1.071 Sum_probs=350.8
Q ss_pred hhHHHHHHhHCHHHHHHHHHHHHhhCCccccceehhcccccccccccceeecceecCCCCceecCCCHHHHhhhCCCCCC
Q 015697 38 LDLHSQLKEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKP 117 (402)
Q Consensus 38 ~~lk~~~~~~ip~~~~~~k~l~~~~g~~~ig~~tv~~~~~Glrgv~~~~t~iS~iD~~~Gi~yRGy~I~eL~~~~p~~~~ 117 (402)
++||++++++||.+++.+|+|+++||+++||++|+|++++||+|+++++|+||+|||++||+||||+|+||++++|+.++
T Consensus 2 ~~lk~~~~~~i~~~~~~~~~~~~~~g~~~~~~~t~~~~~~Gl~g~~~~~t~Is~id~~~Gl~YRGy~I~dLa~~~~~~~~ 81 (435)
T 1csh_A 2 TNLKDVLASLIPKEQARIKTFRQQHGNTAVGQITVDMSYGGMRGMKGLIYETSVLDPDEGIRFRGFSIPECQKLLPKAGG 81 (435)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCHHHHHTTTTTCCCCCCCSEEEETTTEEEETTEEHHHHHHHSCBCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccCcCCCeeeeeeeeEEcCCCCeeECCccHHHHHhhCccccc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred CCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccC
Q 015697 118 DGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIH 197 (402)
Q Consensus 118 ~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~ 197 (402)
+.+++||||+||||+|+|||++|+++|+++|..++.+|+++.++|++||+++|||++|+++|++|+++++|+++|+++.+
T Consensus 82 ~~~~~feev~yLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~v~aL~~~~~f~~~~~~~~~ 161 (435)
T 1csh_A 82 GEEPLPEGLFWLLVTGQIPTPEQVSWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGIN 161 (435)
T ss_dssp CCSBCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHGGGGCHHHHHHHTTCC
T ss_pred CCcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCccCChHHHHHHHHHHHhhcccccccccccCC
Confidence 87889999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred CCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHHhhCCCChHHHHHHHHHHHHhccCCCCCC
Q 015697 198 KSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDG-KIIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNV 276 (402)
Q Consensus 198 k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~-~~~~p~~~l~~~~nf~~ml~~~~~~~~~~l~~~Lil~aDHeg~n~ 276 (402)
+.++|++.++++++|||++|+|+|++||++++++ .+++|++++||++||++||+++++.++++||++|||||||||+|+
T Consensus 162 ~~~~~~~~~~~a~~LiAk~p~iaa~~yr~~~~~~~~~i~p~~~ls~a~nfl~ml~~p~~~~~~~ld~~LiLhADHeg~N~ 241 (435)
T 1csh_A 162 RTKYWEFVYEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDPQFTELMRLYLTIHSDHEGGNV 241 (435)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCTTSCHHHHHHHHHTCCCHHHHHHHHHHHHHTSCCCSCSH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCCCHHHHHHHHhcCCChHHHHHHHHHHHHccCCCCCch
Confidence 6778999999999999999999999999998765 578999999999999999999999999999999999999977999
Q ss_pred hhHHHHHHhccCCChHHHHHHHhhcccCCccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCC
Q 015697 277 SAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVL 356 (402)
Q Consensus 277 St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vy 356 (402)
||||+|+++||++|+|+|++|||++|+||+||||||+|++||.++.++||++.+++++++||++.+++|++|||||||||
T Consensus 242 STftaRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGHrVy 321 (435)
T 1csh_A 242 SAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVL 321 (435)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecCCcccc
Confidence 99999999999999999999999999999999999999999999988899766789999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHhhCCCChHHHHHHHHHHHHHHHHHhcCCCCC
Q 015697 357 RKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVSN 402 (402)
Q Consensus 357 r~~DPRa~~l~~~a~~~~~~d~~~~la~~le~~~~~~l~~~~k~~n 402 (402)
|++|||+++|+++++++.+++|+++++.+||++++++|.+++|.||
T Consensus 322 k~~DPRa~~L~~~a~~l~~~~~~~~~a~~le~~a~~~l~~~~~~k~ 367 (435)
T 1csh_A 322 RKTDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKAKN 367 (435)
T ss_dssp CSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTCCSC
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999988899999999999999999999888776
No 2
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-84 Score=658.55 Aligned_cols=312 Identities=21% Similarity=0.294 Sum_probs=272.9
Q ss_pred HHHHHHHhhCCccccceehhc---ccccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHH
Q 015697 54 RLKKVKSELGKAQLGNITVDM---VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 129 (402)
Q Consensus 54 ~~k~l~~~~g~~~ig~~tv~~---~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~L 129 (402)
.++..|++||.+++++.|+|+ +.+||+|+++++|+||+||+++| |+||||+|+||++++ +||||+||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~d~~~~~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~I~dLa~~~---------~fEevayL 95 (414)
T 3hwk_A 25 PLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAARC---------SFEQVAFL 95 (414)
T ss_dssp -----------------------CCCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHH
T ss_pred eHHHHHHhhCCcccCCccccCCCCCCCCCCCCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC---------CHHHHHHH
Confidence 467889999999999999999 88999999999999999999999 699999999999985 69999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHH
Q 015697 130 LLTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDS 209 (402)
Q Consensus 130 Ll~G~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a 209 (402)
||+|+|||++|+++|+++|..++.||+++.++|++||+++|||++|+++|++|+++++.. .+ |+++++++
T Consensus 96 Ll~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~vsaL~~~~~~~---------~~-~~~~~~~a 165 (414)
T 3hwk_A 96 LWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDE---------DD-AAANRAKA 165 (414)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHTCTTT---------TC-GGGHHHHH
T ss_pred HHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCCcc---------cC-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998764331 11 89999999
Q ss_pred HHHHHhhhHHHHHHHHHHhcCCcccCCCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhcc
Q 015697 210 LNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASA 287 (402)
Q Consensus 210 ~~LiAklp~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt 287 (402)
++|||++|+|+|++||++.+ ..+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||
T Consensus 166 ~rLiAk~pti~a~~yr~~~g-~~~~~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~NaST~taRvvaSt 243 (414)
T 3hwk_A 166 MRMMAVLPTIVAIDMRRRRG-LPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHG-FNASTFAARVVTST 243 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-CCCCCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCCCCCCccccHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhc
Confidence 99999999999999998854 3588999999999999999976 78999999999999999999 89999999999999
Q ss_pred CCChHHHHHHHhhcccCCccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHH
Q 015697 288 LSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQR 367 (402)
Q Consensus 288 ~sd~y~avaAgi~aL~GplHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~ 367 (402)
++|+|+|++|||++|+||+||||||+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+
T Consensus 244 ~ad~ysavaagi~aL~GplHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~L~ 316 (414)
T 3hwk_A 244 QSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEI----G---DPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMK 316 (414)
T ss_dssp TCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHH----C---SGGGHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCccCChHHHHHHHHHHh----C---CchHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHH
Confidence 9999999999999999999999999999999886 5 46899999999999999999999999999999999999
Q ss_pred HHHHhh---CCCChHHHHHHHHHHHHHHH
Q 015697 368 EFALKH---LPDDPLFQLVSKLFEVVPPI 393 (402)
Q Consensus 368 ~~a~~~---~~~d~~~~la~~le~~~~~~ 393 (402)
++++++ .+++++++++.+||+++.+.
T Consensus 317 ~~a~~l~~~~g~~~~~~~a~~le~~~~~~ 345 (414)
T 3hwk_A 317 RALERVGTVRDGQRWLDIYQVLAAEMASA 345 (414)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence 999974 56789999999999999764
No 3
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=5.4e-83 Score=650.68 Aligned_cols=318 Identities=29% Similarity=0.388 Sum_probs=298.4
Q ss_pred hhCCccccceehhcccccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHH
Q 015697 61 ELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKE 139 (402)
Q Consensus 61 ~~g~~~ig~~tv~~~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ 139 (402)
+||.++++.++++ +.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++
T Consensus 9 ~~~~~~~~~~~~~-~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lPt~~ 78 (409)
T 2ibp_A 9 KTTGKILQSPCGP-IIHGLEDVLIKSTSISDIDGEKGILWYRGYRIEELARLS---------TYEEVSYLILYGRLPTKR 78 (409)
T ss_dssp EESSCEECCTTSC-EEGGGTTCEEEEECSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHH
T ss_pred CCCCcccCcCCCC-CCCCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCcCHH
Confidence 7899999999999 77999999999999999999999 699999999999986 699999999999999999
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhh----HHhhhccCCCCCCCchHHHHHHHHHh
Q 015697 140 QVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQ----EAYEKGIHKSKYWEPTYEDSLNLIAR 215 (402)
Q Consensus 140 ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~----~~y~~~~~k~~~~~~~~e~a~~LiAk 215 (402)
|+++|+++|..++.+|+.+.++++.||++ |||++|+++|++|+++++++ ++|..|.+|.++|+..++++++|||+
T Consensus 79 el~~f~~~l~~~~~lp~~~~~~~~~~p~~-hPM~~l~~~v~aL~~~~~~~~~~~~~~~~g~~k~~~~~~~~~~a~~Lia~ 157 (409)
T 2ibp_A 79 ELEDYINRMKKYRELHPATVEVIRNLAKA-HPMFALEAAVAAEGAYDEDNQKLIEALSVGRYKAEEKELAYRIAEKLVAK 157 (409)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHhCCcc-CchHHHHHHHHHHhccCccccchhhhhhcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 99999999999999988775 56888888887899999999999999
Q ss_pred hhHHHHHHHHHHhcCCcccCCCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHH
Q 015697 216 VPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYL 293 (402)
Q Consensus 216 lp~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~ 293 (402)
+|+|+|++||+.+++ .+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+
T Consensus 158 ~p~i~a~~y~~~~g~-~~i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg-~naST~aaRv~aSt~ad~~s 235 (409)
T 2ibp_A 158 MPTIVAYHYRFSRGL-EVVRPRDDLGHAANFLYMMFGREPDPLASRGIDLYLILHADHE-VPASTFAAHVVASTLSDLYS 235 (409)
T ss_dssp HHHHHHHHHHHHTTC-CCCCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHHHcCC-CcccCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCC-CChhHHHHHHHhhcCCcHHH
Confidence 999999999998764 488899999999999999975 78999999999999999998 89999999999999999999
Q ss_pred HHHHHhhcccCCccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhC-CCcccccCCCCCCCCCCChHHHHHHHHh
Q 015697 294 SFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNS-GKVVPGFGHGVLRKTDPRYTCQREFALK 372 (402)
Q Consensus 294 avaAgi~aL~GplHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~-g~~IpGfGH~Vyr~~DPRa~~l~~~a~~ 372 (402)
|++|||++|+||+||||||+|++||.++ + +.+++++||++.+++ |++||||||||||+.|||+++|++++++
T Consensus 236 avaagi~aL~GplHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~ 308 (409)
T 2ibp_A 236 SVAAAIAALKGPLHGGANEMAVRNYLEI----G---TPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRD 308 (409)
T ss_dssp HHHHHHHHHTSTTTSCHHHHHHHHHHHH----C---CGGGHHHHHHHHTSTTCCCCTTBCCSSCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCccCCchHHHHHHHHHh----C---CHHHHHHHHHHHHHhcCCcCcCCCccccCCCCCchHHHHHHHHH
Confidence 9999999999999999999999999886 5 468999999999999 9999999999999999999999999999
Q ss_pred hC---CCC-hHHHHHHHHHHHH--HHHHHhcC
Q 015697 373 HL---PDD-PLFQLVSKLFEVV--PPILTKLG 398 (402)
Q Consensus 373 ~~---~~d-~~~~la~~le~~~--~~~l~~~~ 398 (402)
+. +++ ++++++.+||+++ ++.+.+.+
T Consensus 309 l~~~~~~~g~~~~~a~~le~~~l~~~~~~~k~ 340 (409)
T 2ibp_A 309 YVAKFGDPQNLFAIASAIEQEVLSHPYFQQRK 340 (409)
T ss_dssp HHHHHCCTTCHHHHHHHHHHHHHHCHHHHHTT
T ss_pred HHHHhCCChHHHHHHHHHHHHHccchhhhhcC
Confidence 73 455 9999999999999 88776543
No 4
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=2.2e-82 Score=647.66 Aligned_cols=295 Identities=29% Similarity=0.433 Sum_probs=270.8
Q ss_pred ccceehhcccccccccccceeecceecCCCCc-eecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHH
Q 015697 67 LGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLS 145 (402)
Q Consensus 67 ig~~tv~~~~~Glrgv~~~~t~iS~iD~~~Gi-~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~ 145 (402)
.|.+|+|. |+.|+.+++|+||+||+++|+ +||||+|+||+++. +||||+||||+|+|||++|+++|+
T Consensus 46 ~G~~t~d~---Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~---------~feevayLLl~G~LPt~~el~~f~ 113 (427)
T 3msu_A 46 HGIFTYDP---GFMSTAACESKITYIDGGKGVLLHRGYPIEEWTQKS---------NYRTLCYALIYGELPTDEQVKSFR 113 (427)
T ss_dssp GTEEEECT---TCTTEEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred CCCEeeCC---CcCCceEEEEEeeEEeCCCCEEEECCeEHHHHhccC---------CHHHHHHHHHcCcCCCHHHHHHHH
Confidence 47899987 999999999999999999995 99999999999985 699999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHH
Q 015697 146 KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQ 225 (402)
Q Consensus 146 ~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr 225 (402)
++|.+++.||+++.+++++||+++|||++|+++|++|++++ .+ ...|+++++++++||||+|+|+|++||
T Consensus 114 ~~l~~~~~lp~~~~~~i~~~p~~~hPM~~L~~~v~aL~~~~-------~~---~~~~~~~~~~a~rLiAk~pti~a~~yr 183 (427)
T 3msu_A 114 QEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLAAEH-------IH---NGQKESQDEVAKNIVAKIATIAAMAYR 183 (427)
T ss_dssp HHHHHHCCCCHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHH-------HH---TTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhhc-------cC---CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997632 22 224899999999999999999999999
Q ss_pred HHhcCCcccCCCCCCCHHHHHHHhhCC------CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHh
Q 015697 226 RIYKDGKIIPKDDSLDYGGNFSHMLGF------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAAL 299 (402)
Q Consensus 226 ~~~~~~~~~~p~~~l~~~~nf~~ml~~------~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi 299 (402)
++.|. .+++|++++||++||++||++ ++|.++++||++|||||||| +|+||||+|+++||++|+|+|++|||
T Consensus 184 ~~~G~-~~~~p~~~ls~a~NfL~ml~~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaSt~ad~ysavaAgi 261 (427)
T 3msu_A 184 HNHGK-KFLEPKMEYGYAENFLYMMFADDESYKPDELHIKAMDTIFMLHADHE-QNASTSTVRLSGSTGNSPYAAIIAGI 261 (427)
T ss_dssp HHTTC-CCCCCCTTSCHHHHHHHHHHCSSTTCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHcCC-CCCCCCCccCHHHHHHHHHhcccccCCCCHHHHHHHHHHHhhccCCC-CChhHHHHHHHHccCCCHHHHHHHHH
Confidence 88654 478899999999999999965 48899999999999999999 99999999999999999999999999
Q ss_pred hcccCCccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCC--cccccCCCCCCCCCCChHHHHHHHHhh----
Q 015697 300 NGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGK--VVPGFGHGVLRKTDPRYTCQREFALKH---- 373 (402)
Q Consensus 300 ~aL~GplHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~--~IpGfGH~Vyr~~DPRa~~l~~~a~~~---- 373 (402)
++|+||+||||||+|++||.++ + +++++++||++.+++|+ +||||||||||+.|||+++|+++|+++
T Consensus 262 ~aL~GPlHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~~i~GFGHrVYk~~DPRa~~Lk~~a~~l~~~~ 334 (427)
T 3msu_A 262 TALWGPAHGGANEAVLKMLSEI----G---STENIDKYIAKAKDKDDPFRLMGFGHRVYKNTDPRATAMKKNCEEILAKL 334 (427)
T ss_dssp HHHTSHHHHCHHHHHHHHHHHH----C---STTHHHHHHHHHHTC-----CCSBCCSSSSSCCHHHHHHHHHTHHHHHHG
T ss_pred HHccCCccCCHHHHHHHHHHHh----c---CchHHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999999999999999999886 5 45899999999999999 999999999999999999999999875
Q ss_pred -CCCChHHHHHHHHHHHHHH
Q 015697 374 -LPDDPLFQLVSKLFEVVPP 392 (402)
Q Consensus 374 -~~~d~~~~la~~le~~~~~ 392 (402)
.+++|+++++.+||+++++
T Consensus 335 g~~~~~~~~la~~le~~a~~ 354 (427)
T 3msu_A 335 GHSDNPLLTVAKKLEEIALQ 354 (427)
T ss_dssp GGCSSHHHHHHHHHHHHHC-
T ss_pred CCCCcHHHHHHHHHHHHHhh
Confidence 3479999999999999976
No 5
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=1.1e-81 Score=634.61 Aligned_cols=293 Identities=25% Similarity=0.376 Sum_probs=262.4
Q ss_pred ceehhcccccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHH
Q 015697 69 NITVDMVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKE 147 (402)
Q Consensus 69 ~~tv~~~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~ 147 (402)
-.|+| .||+|+.+++|+||+||+++| |+||||+|+||++++ +||||+||||+|+|||++|+++|+++
T Consensus 4 ~~~~~---~Gl~gv~~~~t~Is~idg~~g~L~YRGy~I~dLa~~~---------~feev~yLLl~G~lPt~~el~~f~~~ 71 (375)
T 3tqg_A 4 MTKTA---KGLRGQSAGETSIATVGKEGHGLTYRGYRIEDLAANA---------TFEEVAYLLLKNKLPTKSELDAYTKK 71 (375)
T ss_dssp ---------------CCEESSEEECTTSCCEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHH
T ss_pred CcccC---CccCCCeEeeeeceEEeCCCCEEEECCeeHHHHHhcC---------CHHHHHHHHHcCcCcCHHHHHHHHHH
Confidence 34555 599999999999999999887 699999999999985 69999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHH
Q 015697 148 LRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRI 227 (402)
Q Consensus 148 L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~ 227 (402)
|.+++.||+++.++|++||+++|||++|+++|++|++++++. .|+..++++++||||+|+|+|++||++
T Consensus 72 l~~~~~lp~~~~~~~~~~p~~~hpM~~l~~~v~aL~~~~~~~-----------~~~~~~~~a~~LiAk~p~i~a~~yr~~ 140 (375)
T 3tqg_A 72 LVNLRSLPPALKDTLERIPASSHPMDVMRTGCSMLGNLEPEN-----------GFENEQNIADRLVAIFPAIQCYWYHYS 140 (375)
T ss_dssp HHTTCCCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCC-----------SGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHccCCCHHHHHHHHhCCCCCChHHHHHHHHHHHHhcCCCC-----------ChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998754331 278999999999999999999999988
Q ss_pred hcCCcccCCCCC-CCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccC
Q 015697 228 YKDGKIIPKDDS-LDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAG 304 (402)
Q Consensus 228 ~~~~~~~~p~~~-l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~G 304 (402)
.+ +.++.|+++ +||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+|
T Consensus 141 ~g-~~~i~p~~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe-~n~St~tarvvaSt~ad~ysavaagi~aL~G 218 (375)
T 3tqg_A 141 HH-GKRIDTELDDLTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHE-FNASTFAARVCSATLSDIYSAVTAAIATLRG 218 (375)
T ss_dssp HH-CCCCCCCCCCSSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTS
T ss_pred cC-CCCcCCCCccccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCHHHHHHHHHHccCCCHHHHHHHHHHhccC
Confidence 65 457888876 9999999999976 78999999999999999999 8999999999999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhhC---CCChHHH
Q 015697 305 PLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLFQ 381 (402)
Q Consensus 305 plHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~---~~d~~~~ 381 (402)
|+||||||+|++||.++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++
T Consensus 219 plHGGAne~v~~ml~~i----~---~~~~~~~~v~~~~~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~l~~~~~~~~~~~ 291 (375)
T 3tqg_A 219 PLHGGANEAAMDLIMLY----K---TPSEAIAGIKRKLANKELIMGFGHAVYRERDPRNAIIKSWAQKLAPNAADGYLFD 291 (375)
T ss_dssp HHHHCHHHHHHHHHTTC----S---SHHHHHHHHHHHHHTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHTTTSTTTHHHH
T ss_pred cccCCHHHHHHHHHHHh----c---ChhHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHHHHHHHHHHhcCCCHHHH
Confidence 99999999999999865 5 578999999999999999999999999999999999999999973 4689999
Q ss_pred HHHHHHHHHHHH
Q 015697 382 LVSKLFEVVPPI 393 (402)
Q Consensus 382 la~~le~~~~~~ 393 (402)
++.+||+++.+.
T Consensus 292 ~a~~le~~~~~~ 303 (375)
T 3tqg_A 292 ISDAIENTMQDE 303 (375)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998654
No 6
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=3.6e-81 Score=641.40 Aligned_cols=304 Identities=27% Similarity=0.434 Sum_probs=276.1
Q ss_pred HHHHHHhhCCccccceehhcccccccccccceeecceecCCCCc-eecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhC
Q 015697 55 LKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTG 133 (402)
Q Consensus 55 ~k~l~~~~g~~~ig~~tv~~~~~Glrgv~~~~t~iS~iD~~~Gi-~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G 133 (402)
+++|+++.| .+|+| +||+|+++++|+||+||+++|+ +||||+|+||++++ +||||+||||+|
T Consensus 38 ~~~l~~~~g-----~~t~~---~Gl~g~~~~~S~Is~idg~~G~L~YRGy~I~dLa~~~---------~feEvayLLl~G 100 (436)
T 2h12_A 38 IRKLPAQLG-----VFTFD---PGYGETAACNSKITFIDGDKGVLLHRGYPIAQLAENA---------SYEEVIYLLLNG 100 (436)
T ss_dssp CTTHHHHHS-----CEEEC---TTCTTEEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHS
T ss_pred ehhhcccCC-----cEeeC---CccCCCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHcC
Confidence 667777654 88998 6999999999999999999996 99999999999995 699999999999
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHH
Q 015697 134 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLI 213 (402)
Q Consensus 134 ~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~Li 213 (402)
+|||++|+++|+++|..++.+|+.+.++++.||+++|||++|+++|++|++++ ++..... .++..++++++||
T Consensus 101 ~LPt~~el~~f~~~l~~~~~lp~~v~~~~~~~p~~~hPM~~l~~~v~aL~~~~------~~~~~~~-~~~~~~~~a~rLi 173 (436)
T 2h12_A 101 ELPNKAQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALSAFY------PDANDIA-IPANRDLAAMRLI 173 (436)
T ss_dssp SCCCHHHHHHHHHHHHTTCSCCGGGHHHHTTSCTTCCHHHHHHHHHHHHGGGC------C---------CCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcC------cccccCC-CHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999753 2222222 3478899999999
Q ss_pred HhhhHHHHHHHHHHhcCCcccCCCCCCCHHHHHHHhhCC-------CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhc
Q 015697 214 ARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVAS 286 (402)
Q Consensus 214 Aklp~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~-------~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaS 286 (402)
|++|+|+|++||+..++ .+++|++++||++||++||.+ +++.++++||++|||||||| +|+||||+|||+|
T Consensus 174 Ak~ptiaa~~yr~~~g~-~~~~p~~~ls~a~nfl~ml~g~~~~~~~~~~~~~~~ld~~LiLhADHe-~NaSTftaRvvaS 251 (436)
T 2h12_A 174 AKIPTIAAWAYKYTQGE-AFIYPRNDLNYAENFLSMMFARMSEPYKVNPVLARAMNRILILHADHE-QNASTSTVRLAGS 251 (436)
T ss_dssp HHHHHHHHHHHHHHHTC-CCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHhcCCCCccCCCCHHHHHHHHhhheeecCCC-CchHHHHHHHHHh
Confidence 99999999999988764 478999999999999999964 78999999999999999998 8999999999999
Q ss_pred cCCChHHHHHHHhhcccCCccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCC--CcccccCCCCCCCCCCChH
Q 015697 287 ALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSG--KVVPGFGHGVLRKTDPRYT 364 (402)
Q Consensus 287 t~sd~y~avaAgi~aL~GplHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g--~~IpGfGH~Vyr~~DPRa~ 364 (402)
|++|+|+|++|||++|+||+||||||+|++||.+| | +++++++||++.++++ ++||||||||||+.|||++
T Consensus 252 t~ad~ysaiaAgi~aL~GPlHGGAne~v~~ml~ei----~---~~~~v~~~i~~~l~~~~g~~imGFGHrVYk~~DPRa~ 324 (436)
T 2h12_A 252 TGANPFACIAAGIAALWGPAHGGANEAVLKMLARI----G---KKENIPAFIAQVKDKNSGVKLMGFGHRVYKNFDPRAK 324 (436)
T ss_dssp TTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHH----C---SGGGHHHHHHHHHCTTSCCCCTTBCCSSCSSCCHHHH
T ss_pred cCccHHHHHHHHHHhcCCCccCCHHHHHHHHHHHh----c---CchHHHHHHHHHHhccCCCcccCCCccccCCCCCcHH
Confidence 99999999999999999999999999999999986 5 5789999999999955 9999999999999999999
Q ss_pred HHHHHHHhh---CC--CChHHHHHHHHHHHHH
Q 015697 365 CQREFALKH---LP--DDPLFQLVSKLFEVVP 391 (402)
Q Consensus 365 ~l~~~a~~~---~~--~d~~~~la~~le~~~~ 391 (402)
+|+++|+++ .+ ++|+++++.+||+++.
T Consensus 325 iLk~~a~~l~~~~g~~~~~~~~la~~lE~~al 356 (436)
T 2h12_A 325 IMQQTCHEVLTELGIKDDPLLDLAVELEKIAL 356 (436)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 999999987 24 7899999999999973
No 7
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=2.7e-81 Score=636.16 Aligned_cols=304 Identities=23% Similarity=0.326 Sum_probs=260.7
Q ss_pred CCccccceehhc---ccccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCH
Q 015697 63 GKAQLGNITVDM---VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSK 138 (402)
Q Consensus 63 g~~~ig~~tv~~---~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~ 138 (402)
|.+++...|+++ +-.||+|+.+++|+||+||+++| |+||||+|+||+++. +||||+||||+|+|||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~Gl~gv~~~~T~Is~idg~~g~L~YRGy~I~dLa~~~---------~fEevayLLl~G~LPt~ 88 (404)
T 3o8j_A 18 DTTILQNNTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHC---------EFEEVAHLLIHGKLPTR 88 (404)
T ss_dssp -----------------------CCCEESSEEECC-CCCEEETTEEHHHHHHHC---------CHHHHHHHHHTSSCCCH
T ss_pred CcchhhcCcccCCCCCCCCCCCceEeeeeceeeeCCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHcCcCCCH
Confidence 344555555555 55799999999999999999888 699999999999985 69999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhH
Q 015697 139 EQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPV 218 (402)
Q Consensus 139 ~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~ 218 (402)
+|+++|+++|..++.||+++.+++++||+++|||++|+++|++|++++++. ++..++..++++++||||+|+
T Consensus 89 ~el~~f~~~l~~~~~lp~~~~~~~~~~p~~~hPM~~L~~~vsaL~~~~~~~--------~d~~~~~~~~~a~rLiAk~pt 160 (404)
T 3o8j_A 89 DELNAYKSKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEK--------EGHTVSGARDIADKLLASLSS 160 (404)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCC--------TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHhCCCCCChHHHHHHHHHHHHhcCccc--------ccCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998755432 122356788999999999999
Q ss_pred HHHHHHHHHhcCCcccC-CCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHH
Q 015697 219 VAAYVYQRIYKDGKIIP-KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSF 295 (402)
Q Consensus 219 iaa~iyr~~~~~~~~~~-p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~av 295 (402)
|+|++||+..++ +++. |++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|+
T Consensus 161 i~a~~yr~~~g~-~~i~~~~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~N~St~taRvvaSt~ad~ysav 238 (404)
T 3o8j_A 161 ILLYWYHYSHNG-ERIQPETDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDVYSAI 238 (404)
T ss_dssp HHHHHHHHHHHC-CCCCCCCCCSSHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SSHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhcCCCHHHHH
Confidence 999999988664 4554 55899999999999976 78999999999999999999 8999999999999999999999
Q ss_pred HHHhhcccCCccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhhC-
Q 015697 296 AAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL- 374 (402)
Q Consensus 296 aAgi~aL~GplHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~- 374 (402)
+|||++|+||+||||||+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.
T Consensus 239 aagi~aL~GplHGGAne~v~~ml~~i----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~l~~~a~~l~~ 311 (404)
T 3o8j_A 239 IGAIGALRGPKHGGANEVSLEIQQRY----E---TPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSE 311 (404)
T ss_dssp HHHHHHHTSTTTTCHHHHHHHHHTTC----S---SHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCcCCHHHHHHHHHHHh----c---CchhHHHHHHHHHhcCCcccCCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999764 5 578999999999999999999999999999999999999999874
Q ss_pred --CCChHHHHHHHHHHHHHH
Q 015697 375 --PDDPLFQLVSKLFEVVPP 392 (402)
Q Consensus 375 --~~d~~~~la~~le~~~~~ 392 (402)
+++++++++.+||+++.+
T Consensus 312 ~~g~~~~~~~a~~le~~~~~ 331 (404)
T 3o8j_A 312 EGGSLKMYHIADRLETVMWE 331 (404)
T ss_dssp HHSCCHHHHHHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHHHHHH
Confidence 468999999999999854
No 8
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=8.4e-82 Score=643.63 Aligned_cols=304 Identities=26% Similarity=0.407 Sum_probs=277.4
Q ss_pred HHHHHHhhCCccccceehhcccccccccccceeecceecCCCCc-eecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhC
Q 015697 55 LKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTG 133 (402)
Q Consensus 55 ~k~l~~~~g~~~ig~~tv~~~~~Glrgv~~~~t~iS~iD~~~Gi-~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G 133 (402)
|++|++ .|.+|+|. ||.|+.+++|.||+||+++|+ +||||+|+||+++. +||||+||||+|
T Consensus 31 ~~~l~~------~g~~~~d~---Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~---------~feevayLLl~G 92 (426)
T 3l96_A 31 IRTLGS------KGVFTFDP---GFTSTTSCESKITFIDGDEGILLHRGFPIDQLATDS---------NYLEVCYILLNG 92 (426)
T ss_dssp CTTHHH------HTCCEECT---TSSSEEEEEESSEEEEGGGTEEEETTEEHHHHHHHS---------CHHHHHHHHHHS
T ss_pred eeeccc------CCcEEeCC---CCCCceEEeEEeEEEECCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHCC
Confidence 455655 37999997 999999999999999999995 99999999999985 699999999999
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHH
Q 015697 134 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLI 213 (402)
Q Consensus 134 ~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~Li 213 (402)
+|||++|+++|+++|.+++.||+++.+++++||+++|||++|+++|++|+++ |+++.+ ...+++.++++++||
T Consensus 93 ~LPt~~el~~f~~~l~~~~~lp~~~~~~~~~~p~~~hPM~~l~~~vsaL~~~------~~~~~~-~~~~~~~~~~a~rLi 165 (426)
T 3l96_A 93 EKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAF------YHDSLD-VNNPRHREIAAFRLL 165 (426)
T ss_dssp SCCCHHHHHHHHHHHHHTCSCCHHHHHHHTTSCTTSCHHHHHHHHHTTGGGT------CGGGCC-TTSHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHccCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhh------Cccccc-CCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999864 333322 123678889999999
Q ss_pred HhhhHHHHHHHHHHhcCCcccCCCCCCCHHHHHHHhhCC-------CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhc
Q 015697 214 ARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVAS 286 (402)
Q Consensus 214 Aklp~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~-------~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaS 286 (402)
||+|+|+|++||++.|. .+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++|
T Consensus 166 Ak~pti~a~~yr~~~G~-~~~~p~~~ls~a~nfl~ml~g~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaS 243 (426)
T 3l96_A 166 SKMPTMAAMCYKYSIGQ-PFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHE-QNASTSTVRTAGS 243 (426)
T ss_dssp HHHHHHHHHHHHHHHTC-CCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHTTSCCS-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHhhcccCC-CCchHHHHHHHhc
Confidence 99999999999988754 478999999999999999954 47889999999999999999 8999999999999
Q ss_pred cCCChHHHHHHHhhcccCCccccchHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCC--cccccCCCCCCCCCCChH
Q 015697 287 ALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGK--VVPGFGHGVLRKTDPRYT 364 (402)
Q Consensus 287 t~sd~y~avaAgi~aL~GplHGgAne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~--~IpGfGH~Vyr~~DPRa~ 364 (402)
|++|+|+|++|||++|+||+||||||+|++||.++ + +++++++||++.+++|+ +||||||||||+.|||++
T Consensus 244 t~ad~ysaiaAgi~aL~GplHGGAne~v~~ml~~i----~---~~~~~~~~v~~~l~~~~~~~I~GfGHrVyk~~DPRa~ 316 (426)
T 3l96_A 244 SGANPFACIAAGIASLWGPAHGGANEAALKMLEEI----G---KKENIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRAT 316 (426)
T ss_dssp TTCCHHHHHHHHHHHHHTTTTSSHHHHHHHHHHHC----C---SSSSTTTTSGGGCCSSCCTGGGTBCCSSCSSCCTTHH
T ss_pred cCCcHHHHHHHHHHhccCCccCCHHHHHHHHHHHh----c---CchhHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHH
Confidence 99999999999999999999999999999999875 5 35789999999999999 999999999999999999
Q ss_pred HHHHHHHhhC---C-CChHHHHHHHHHHHHHH
Q 015697 365 CQREFALKHL---P-DDPLFQLVSKLFEVVPP 392 (402)
Q Consensus 365 ~l~~~a~~~~---~-~d~~~~la~~le~~~~~ 392 (402)
+|+++|++++ + ++++++++.+||+++++
T Consensus 317 ~l~~~a~~l~~~~g~~~~~~~~a~~le~~~~~ 348 (426)
T 3l96_A 317 VMRETCHEVLKELGTKDDLLEVAMELENIALN 348 (426)
T ss_dssp HHHHHHHHHHHHTCSCCSSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Confidence 9999998753 2 78999999999999986
No 9
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=8.2e-81 Score=627.46 Aligned_cols=289 Identities=25% Similarity=0.381 Sum_probs=267.3
Q ss_pred cccccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC
Q 015697 74 MVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA 152 (402)
Q Consensus 74 ~~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~ 152 (402)
++.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++
T Consensus 1 ~~~~Gl~g~~~~~T~Is~id~~~G~L~YRGy~i~dLa~~~---------~feeva~LLl~G~lPt~~el~~f~~~l~~~~ 71 (367)
T 2p2w_A 1 MIQKGLEGVKICESSICYLDGINGRLYYRGIPVEELAEKS---------TFEETAYFLWYGKLPTKSELEEFKRKMADYR 71 (367)
T ss_dssp CCCTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTC
T ss_pred CCCCcCCCCeeeeeeCeEEECCCCEEEECCeeHHHHHcCC---------CHHHHHHHHHCCCCCCHHHHHHHHHHHHHcc
Confidence 356899999999999999999999 699999999999996 6999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCc
Q 015697 153 TVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGK 232 (402)
Q Consensus 153 ~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~ 232 (402)
.+|+.+.++++.+|+++|||++|+++|++|+++ |++ |+..++++++|||++|+|+|++||++.++ .
T Consensus 72 ~lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~-------~~~~~~~a~~lia~~p~i~a~~y~~~~g~-~ 137 (367)
T 2p2w_A 72 ELPAEALGILYHLPKNLHYIDVLKIFLSIHGSM------DGN-------DEDLREKAIRVASVFPTILAYYYRYSKGK-E 137 (367)
T ss_dssp CCCHHHHHHHTTSCSCCCHHHHHHHHHSCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred CCCHHHHHHHHhCccCCChHHHHHHHHHHHhcc------CCC-------hHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C
Confidence 999999999999999999999999999999873 211 78899999999999999999999998764 4
Q ss_pred ccCCCCCCCHHHHHHHhhCCCChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccchH
Q 015697 233 IIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 312 (402)
Q Consensus 233 ~~~p~~~l~~~~nf~~ml~~~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAne 312 (402)
++.|++++||++||++||++..+..+++||++|||||||| +|+||||+||++||++|+|+|++|||++|+||+||||||
T Consensus 138 ~i~p~~~l~~a~nfl~ml~~~~~~~~~~ld~~LvL~ADHg-~NaSTftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne 216 (367)
T 2p2w_A 138 LIRPRKDLSHVENFYYMMFGERNEKIRLLESAFILLMEQD-INASTFAALVIASTLSDLYSCIVGALGALKGPLHGGASE 216 (367)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCCCTTHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHH
T ss_pred CCCCCCCCCHHHHHHHHhcCCChHHHHHHHHHHhHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHHccCCccCChHH
Confidence 7889999999999999998744888999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhhCCCChHHHHHHHHHHHHHH
Q 015697 313 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 392 (402)
Q Consensus 313 ~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~~~d~~~~la~~le~~~~~ 392 (402)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.+++++++++.+||+++.+
T Consensus 217 ~v~~ml~ei----~---~~~~~~~~i~~~l~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~ 289 (367)
T 2p2w_A 217 KVPPMLEEI----G---SEDRVEEFVQKCLKEKRKIMGFGHRVYKTYDPRAVFLKRVLQEHFPDSKLFRIASKLEEYIVS 289 (367)
T ss_dssp HHHHHHHHH----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHHcCCccccCCccccCCCCCchHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 999999886 5 568999999999999999999999999999999999999999986678999999999999766
Q ss_pred H
Q 015697 393 I 393 (402)
Q Consensus 393 ~ 393 (402)
.
T Consensus 290 ~ 290 (367)
T 2p2w_A 290 N 290 (367)
T ss_dssp T
T ss_pred H
Confidence 3
No 10
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=5.4e-80 Score=624.10 Aligned_cols=299 Identities=24% Similarity=0.348 Sum_probs=273.7
Q ss_pred ccccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC
Q 015697 75 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT 153 (402)
Q Consensus 75 ~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~ 153 (402)
+.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.
T Consensus 5 ~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~ 75 (378)
T 1a59_A 5 IHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKC---------SFEQVAYLLWNSELPNDSELKAFVNFERSHRK 75 (378)
T ss_dssp CCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCccCCCeeeeeeceEEECCCCeEEEcCccHHHHHhcC---------CHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCC
Confidence 44799999999999999999999 699999999999996 69999999999999999999999999999999
Q ss_pred CCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCcc
Q 015697 154 VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 233 (402)
Q Consensus 154 lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~~ 233 (402)
+|+.+.++++.+|+++|||++|+++|++|+++++ +. .+.+|+..++++++|||++|+|+|++||+.+++ .+
T Consensus 76 lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~-------~~-~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~ 146 (378)
T 1a59_A 76 LDENVKGAIDLLSTACHPMDVARTAVSVLGANHA-------RA-QDSSPEANLEKAMSLLATFPSVVAYDQRRRRGE-EL 146 (378)
T ss_dssp CCHHHHHHHTTSCTTSCHHHHHHHHHHHHHHTCT-------TT-TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred CCHHHHHHHHhCCCCCCcHHHHHHHHHHHHhcCC-------Cc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 9999999999999999999999999999987432 11 133689999999999999999999999998764 47
Q ss_pred cCCCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccch
Q 015697 234 IPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLAN 311 (402)
Q Consensus 234 ~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAn 311 (402)
++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||
T Consensus 147 i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAn 225 (378)
T 1a59_A 147 IEPREDLDYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHS-FNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGAN 225 (378)
T ss_dssp CCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCch
Confidence 8899999999999999976 78999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCC---hhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhhC---CCChHHHHHHH
Q 015697 312 QEVLLWIKSVVDECGENVT---TEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLFQLVSK 385 (402)
Q Consensus 312 e~v~~~l~~i~~~ig~~~s---~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~---~~d~~~~la~~ 385 (402)
|+|++||.++.+. |++.+ ++++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++.+
T Consensus 226 e~v~~~l~~i~~~-~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~ 304 (378)
T 1a59_A 226 EAVMHTFEEIGIR-KDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNG 304 (378)
T ss_dssp HHHHHHHHHSCCC-SSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHH
T ss_pred HHHHHHHHHHhhc-CCccccchHHHHHHHHHHHHhCCCeeeCCCCcccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999987432 32211 27899999999999999999999999999999999999999973 67899999999
Q ss_pred HHHHHHHH
Q 015697 386 LFEVVPPI 393 (402)
Q Consensus 386 le~~~~~~ 393 (402)
||+++.+.
T Consensus 305 le~~~~~~ 312 (378)
T 1a59_A 305 LEAAMEEA 312 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998654
No 11
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=9.8e-80 Score=618.59 Aligned_cols=289 Identities=25% Similarity=0.356 Sum_probs=271.0
Q ss_pred cccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCC
Q 015697 76 IGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATV 154 (402)
Q Consensus 76 ~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~l 154 (402)
.+||+|+++++|+||+||+++| ++||||+|+||+++. +||||+||||+|+|||++|+++|+++|..++.+
T Consensus 2 ~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~l 72 (363)
T 2c6x_A 2 HYGLKGITCVETSISHIDGEKGRLIYRGHHAKDIALNH---------SFEEAAYLILFGKLPSTEELQVFKDKLAAERNL 72 (363)
T ss_dssp CGGGTTCCCEEESSEEEETTTTEEEETTEEHHHHHHHS---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSC
T ss_pred CCcCCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCC
Confidence 4799999999999999999999 699999999999985 699999999999999999999999999999999
Q ss_pred CHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCccc
Q 015697 155 PDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKII 234 (402)
Q Consensus 155 p~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~~~ 234 (402)
|+.+.++++.+|+++|||++|+++|++|++ + . . .|++.++++++|||++|+|+|++||++.++ .++
T Consensus 73 p~~~~~~~~~~p~~~hpM~~l~~~v~~l~~-~-~----------~-~~~~~~~~a~~Lia~~p~i~a~~~~~~~g~-~~i 138 (363)
T 2c6x_A 73 PEHIERLIQSLPNNMDDMSVLRTVVSALGE-N-T----------Y-TFHPKTEEAIRLIAITPSIIAYRKRWTRGE-QAI 138 (363)
T ss_dssp CHHHHHHHHHSCSSSCHHHHHHHHHHHHCC-S-S----------C-CSSCCHHHHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred CHHHHHHHHhCcccCCchHHHHHHHHhhcC-C-C----------C-ChHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCc
Confidence 999999999999999999999999999986 1 1 1 288999999999999999999999998754 478
Q ss_pred CCCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccchH
Q 015697 235 PKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 312 (402)
Q Consensus 235 ~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAne 312 (402)
+|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||
T Consensus 139 ~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne 217 (363)
T 2c6x_A 139 APSSQYGHVENYYYMLTGEQPSEAKKKALETYMILATEHG-MNASTFSARVTLSTESDLVSAVTAALGTMKGPLHGGAPS 217 (363)
T ss_dssp CCCTTSCSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCC-CcHHHHHHHHHHhcCccHHHHHHHHHHHcccCccCCchH
Confidence 899999999999999976 78999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhhCCCChHHHHHHHHHHHHHH
Q 015697 313 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 392 (402)
Q Consensus 313 ~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~~~d~~~~la~~le~~~~~ 392 (402)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++++++|+++++.+||+++.+
T Consensus 218 ~v~~~l~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~ 290 (363)
T 2c6x_A 218 AVTKMLEDI----G---EKEHAEAYLKEKLEKGERLMGFGHRVYKTKDPRAEALRQKAEEVAGNDRDLDLALHVEAEAIR 290 (363)
T ss_dssp HHHHHHHTC----C---SSTTHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----C---ChhhHHHHHHHHHHcCCcccCCCCcccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 999999775 5 457899999999999999999999999999999999999999987789999999999999976
Q ss_pred HHH
Q 015697 393 ILT 395 (402)
Q Consensus 393 ~l~ 395 (402)
..+
T Consensus 291 ~~g 293 (363)
T 2c6x_A 291 LLE 293 (363)
T ss_dssp HHH
T ss_pred hhc
Confidence 543
No 12
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=7.9e-80 Score=623.76 Aligned_cols=297 Identities=22% Similarity=0.330 Sum_probs=275.8
Q ss_pred ccccccccccceeecceecCCCC-ceecCCCHHHHhh-hCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC
Q 015697 75 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQK-LLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA 152 (402)
Q Consensus 75 ~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~-~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~ 152 (402)
+.+||+|+++++|+||+||+++| ++||||+|+||++ +. +||||+||||+|+|||++|+++|+++|..++
T Consensus 7 ~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~ 77 (385)
T 2ifc_A 7 ISKGLEDVNIKWTRLTTIDGNKGILRYGGYSVEDIIASGA---------QDEEIQYLFLYGNLPTEQELRKYKETVQKGY 77 (385)
T ss_dssp BCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHTTC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHGGG
T ss_pred CCCCcCCCeeeeeeCeEEECCCCEEEECCccHHHHHhcCC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc
Confidence 44899999999999999999999 6999999999999 64 6999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCc
Q 015697 153 TVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGK 232 (402)
Q Consensus 153 ~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~ 232 (402)
.+|+.+.++++.+|+++|||++|+++|++|+++ |++. +++|+..++++++|||++|+|+|++||+..++ .
T Consensus 78 ~lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~~---~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~ 147 (385)
T 2ifc_A 78 KIPDFVINAIRQLPRESDAVAMQMAAVAAMAAS------ETKF---KWNKDTDRDVAAEMIGRMSAITVNVYRHIMNM-P 147 (385)
T ss_dssp CCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHH------CTTC---CCCTTTHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred CCCHHHHHHHHhCCCCCCchHHHHHHHHHHHhc------CCcc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Confidence 999999999999999999999999999999874 2322 24799999999999999999999999998754 4
Q ss_pred ccCCCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccc
Q 015697 233 IIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLA 310 (402)
Q Consensus 233 ~~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgA 310 (402)
+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||
T Consensus 148 ~i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGA 226 (385)
T 2ifc_A 148 AELPKPSDSYAESFLNAAFGRKATKEEIDAMNTALILYTDHE-VPASTTAGLVAVSTLSDMYSGITAALAALKGPLHGGA 226 (385)
T ss_dssp CCCCCCCSCHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSH
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCC-ccHHHHHHHHHHhcCCcHHHHHHHHHHHccCCccCCh
Confidence 78899999999999999976 78999999999999999998 8999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccccCCCCCCCCCCChHHHHHHHHhh----CCCChHHHHHHH
Q 015697 311 NQEVLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKH----LPDDPLFQLVSK 385 (402)
Q Consensus 311 ne~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l-~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~----~~~d~~~~la~~ 385 (402)
||+|++||.++ + +.+++++||++.+ ++|++||||||||||+.|||+++|+++++++ .+++++++++.+
T Consensus 227 ne~v~~ml~ei----~---~~~~~~~~i~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~ 299 (385)
T 2ifc_A 227 AEAAIAQFDEI----K---DPAMVEKWFNDNIINGKKRLMGFGHRVYKTYDPRAKIFKGIAEKLSSKKPEVHKVYEIATK 299 (385)
T ss_dssp HHHHHHHHHHH----C---SGGGHHHHHHHHTTTSSSCCTTBCCSSCSSCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh----C---CHHHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 99999999886 5 4689999999999 9999999999999999999999999999998 346899999999
Q ss_pred HHHHHHHHHHhcC
Q 015697 386 LFEVVPPILTKLG 398 (402)
Q Consensus 386 le~~~~~~l~~~~ 398 (402)
||+++++.+.+.+
T Consensus 300 le~~~~~~~~~k~ 312 (385)
T 2ifc_A 300 LEDFGIKAFGSKG 312 (385)
T ss_dssp HHHHHHHHHGGGT
T ss_pred HHHHHHHHHhhcC
Confidence 9999999766644
No 13
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=1e-79 Score=621.55 Aligned_cols=294 Identities=21% Similarity=0.311 Sum_probs=273.3
Q ss_pred ccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCC
Q 015697 77 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 155 (402)
Q Consensus 77 ~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp 155 (402)
+||+|+++++|+||+||+++| ++||||+|+||+++. +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 7 ~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp 77 (378)
T 1vgm_A 7 RGLENVIIKTTGLTYIDGINGILRYRGYDINDLVNYA---------SYEELIHLMLYGELPNRQQLNQIKGIINESFEVP 77 (378)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCC
T ss_pred CccCCCeeeeeeceEEECCCCeEEEcCeeHHHHHhcC---------CHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCC
Confidence 699999999999999999999 699999999999985 6999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCcccC
Q 015697 156 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP 235 (402)
Q Consensus 156 ~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~~~~ 235 (402)
+.+.++++.+|+++|||++|+++|++|+++ |++.. + |+..++++++|||++|+|+|++||++.++ .++.
T Consensus 78 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~~~---~-~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i~ 146 (378)
T 1vgm_A 78 EQVISTIFSMPRNCDAIGMMETAFGILASI------YDPKW---N-RATNKELAVQIIAKTATITANIYRAKEGL-KPKI 146 (378)
T ss_dssp HHHHHHHTTSCTTSCHHHHHHHHHHHHHHH------HCCCC---C-TTTHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHhcc------CCccC---C-HHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999873 32221 2 89999999999999999999999998754 4788
Q ss_pred CCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccchHH
Q 015697 236 KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQE 313 (402)
Q Consensus 236 p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAne~ 313 (402)
|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||+
T Consensus 147 p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~ 225 (378)
T 1vgm_A 147 PEPSESYAESFLAATFGKKPTQEEIKAMDASLILYTDHE-VPASTTAALVASSTLSDMYSCIVAALAALKGPLHGGAAEE 225 (378)
T ss_dssp CCCCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHH
Confidence 99999999999999975 78999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccccCCCCCCCCCCChHHHHHHHHhhC---C-CChHHHHHHHHHH
Q 015697 314 VLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---P-DDPLFQLVSKLFE 388 (402)
Q Consensus 314 v~~~l~~i~~~ig~~~s~~~~~~~v~~~l-~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~---~-~d~~~~la~~le~ 388 (402)
|++||.++ + +.+++++||++.+ ++|++||||||||||+.|||+++|+++++++. + ++++++++.+||+
T Consensus 226 v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~ 298 (378)
T 1vgm_A 226 AFKQFVEI----G---SVENADKWFEEKIIKGKSRLMGFGHRVYKTYDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEK 298 (378)
T ss_dssp HHHHHHHH----C---SGGGHHHHHHHHTTTSCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----C---CHhHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999886 5 5689999999999 99999999999999999999999999999983 4 5789999999999
Q ss_pred HHHHHHHhcC
Q 015697 389 VVPPILTKLG 398 (402)
Q Consensus 389 ~~~~~l~~~~ 398 (402)
++++.+.+.+
T Consensus 299 ~~~~~~~~k~ 308 (378)
T 1vgm_A 299 LGVDTFGSKH 308 (378)
T ss_dssp HHHHHHGGGT
T ss_pred HHHHHHhhCC
Confidence 9998665543
No 14
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=1.2e-79 Score=620.96 Aligned_cols=293 Identities=26% Similarity=0.388 Sum_probs=273.0
Q ss_pred ccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCC
Q 015697 77 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 155 (402)
Q Consensus 77 ~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp 155 (402)
+||+|+++++|+||+||+++| ++||||+|+||+++. +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 6 ~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~feeva~LL~~G~lPt~~el~~f~~~l~~~~~lp 76 (377)
T 1o7x_A 6 KGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYG---------SYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVP 76 (377)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCC
T ss_pred cccCCCeeeeeeCeEEECCCCEEEECCccHHHHHcCC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCC
Confidence 799999999999999999999 699999999999985 6999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCcccC
Q 015697 156 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP 235 (402)
Q Consensus 156 ~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~~~~ 235 (402)
+.+.++++.+|+++|||++|+++|++|+++ |++. . .|+..++++++|||++|+|+|++||+..++ .+++
T Consensus 77 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~~-~---~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i~ 145 (377)
T 1o7x_A 77 QEVLDTIYLMPKEADAIGLLEVGTAALASI------DKNF-K---WKENDKEKAISIIAKMATLVANVYRRKEGN-KPRI 145 (377)
T ss_dssp HHHHHHHHHSCTTSCHHHHHHHHHHHHHHH------CCCC-C---SSSSHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred HHHHHHHHhCcccCCcHHHHHHHHHHHhhc------CCCc-C---CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 999999999999999999999999999874 2222 1 389999999999999999999999998754 4788
Q ss_pred CCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccchHH
Q 015697 236 KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQE 313 (402)
Q Consensus 236 p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAne~ 313 (402)
|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||+
T Consensus 146 p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~ 224 (377)
T 1o7x_A 146 PEPSDSFAKSFLLASFAREPTTDEINAMDKALILYTDHE-VPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEE 224 (377)
T ss_dssp CCCCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-CCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CChHHHHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChHHH
Confidence 99999999999999975 78999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccccCCCCCCCCCCChHHHHHHHHhhC---CC-ChHHHHHHHHHH
Q 015697 314 VLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PD-DPLFQLVSKLFE 388 (402)
Q Consensus 314 v~~~l~~i~~~ig~~~s~~~~~~~v~~~l-~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~---~~-d~~~~la~~le~ 388 (402)
|++||.++ + +.+++++||++.+ ++|++||||||||||+.|||+++|+++++++. ++ +++++++.+||+
T Consensus 225 v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~le~ 297 (377)
T 1o7x_A 225 AFKQFIEI----G---DPNRVQNWFNDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEE 297 (377)
T ss_dssp HHHHHHHH----C---SGGGHHHHHHHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----C---ChhHHHHHHHHHHHhcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 99999886 5 5689999999999 99999999999999999999999999999983 45 789999999999
Q ss_pred HHHHHHHhc
Q 015697 389 VVPPILTKL 397 (402)
Q Consensus 389 ~~~~~l~~~ 397 (402)
++++.+.+.
T Consensus 298 ~~~~~~~~k 306 (377)
T 1o7x_A 298 LGIKQFSSK 306 (377)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHhhc
Confidence 999866443
No 15
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=2.2e-79 Score=619.03 Aligned_cols=290 Identities=26% Similarity=0.379 Sum_probs=271.7
Q ss_pred ccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCC
Q 015697 77 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 155 (402)
Q Consensus 77 ~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp 155 (402)
+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 5 ~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp 75 (377)
T 1iom_A 5 RGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKS---------SFEETTFLLLHGRLPRRQELEEFSAALARRRALP 75 (377)
T ss_dssp GGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCC
T ss_pred cccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999 699999999999986 6999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCcccC
Q 015697 156 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP 235 (402)
Q Consensus 156 ~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~~~~ 235 (402)
+.+.++++.+|+++|||++|+++|++|+++++. . .+.+|+..++++++|||++|+|+|++||+..++ .+++
T Consensus 76 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~~-------~-~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i~ 146 (377)
T 1iom_A 76 AHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPT-------E-GDISREALYEKGLDLIAKFATIVAANKRLKEGK-EPIP 146 (377)
T ss_dssp HHHHHHHTTSCTTSCHHHHHHHHHHHHHHTCTT-------T-TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred HHHHHHHHhCCcCCCchhHHHHHHHHHhccCCC-------c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCC
Confidence 999999999999999999999999999874321 1 133689999999999999999999999998764 4888
Q ss_pred CCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccchHH
Q 015697 236 KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQE 313 (402)
Q Consensus 236 p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAne~ 313 (402)
|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||+
T Consensus 147 p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~ 225 (377)
T 1iom_A 147 PREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHG-FNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEA 225 (377)
T ss_dssp CCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHH
T ss_pred CCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHcccCccCChhHH
Confidence 99999999999999975 78999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhh---CCCChHHHHHHHHHHHH
Q 015697 314 VLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKH---LPDDPLFQLVSKLFEVV 390 (402)
Q Consensus 314 v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~---~~~d~~~~la~~le~~~ 390 (402)
|++||.++ + +.+++++||++.+++|++||||||||||+.|||+++|+++++++ .+++++++++.+||+++
T Consensus 226 v~~ml~ei----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~a~~le~~~ 298 (377)
T 1iom_A 226 VMRMIQEI----G---TPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEA 298 (377)
T ss_dssp HHHHHHHH----C---SHHHHHHHHHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHh----c---CchhHHHHHHHHHHCCCcccCCCCcccCCCCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999886 5 57899999999999999999999999999999999999999997 36789999999999999
Q ss_pred HH
Q 015697 391 PP 392 (402)
Q Consensus 391 ~~ 392 (402)
.+
T Consensus 299 ~~ 300 (377)
T 1iom_A 299 GK 300 (377)
T ss_dssp HH
T ss_pred HH
Confidence 77
No 16
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=2.3e-79 Score=617.68 Aligned_cols=290 Identities=27% Similarity=0.400 Sum_probs=270.8
Q ss_pred cccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCC
Q 015697 76 IGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATV 154 (402)
Q Consensus 76 ~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~l 154 (402)
.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+
T Consensus 2 ~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~---------~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~l 72 (371)
T 1aj8_A 2 AKGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELS---------TFEEVVYLLWWGKLPSLSELENFKKELAKSRGL 72 (371)
T ss_dssp CGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCC
T ss_pred CCCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCC
Confidence 3799999999999999999999 699999999999986 699999999999999999999999999999999
Q ss_pred CHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCC-CCCchHHHHHHHHHhhhHHHHHHHHHHhcCCcc
Q 015697 155 PDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSK-YWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 233 (402)
Q Consensus 155 p~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~-~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~~ 233 (402)
|+.+.++++.+|+++|||++|+++|++|+++++ +. .+. +|+..++++++|||++|+|+|++||+..++ ++
T Consensus 73 p~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~-------~~-~~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~ 143 (371)
T 1aj8_A 73 PKEVIEIMEALPKNTHPMGALRTIISYLGNIDD-------SG-DIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGL-EY 143 (371)
T ss_dssp CHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHST-------TT-TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred CHHHHHHHHhCCCCCChHHHHHHHHHHHhccCC-------cc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 999999999999999999999999999987422 11 222 689999999999999999999999998764 47
Q ss_pred cCCCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccch
Q 015697 234 IPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLAN 311 (402)
Q Consensus 234 ~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAn 311 (402)
++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||
T Consensus 144 i~p~~~ls~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAn 222 (371)
T 1aj8_A 144 VPPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAV 222 (371)
T ss_dssp CCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCC-CChhHHHHHHHhhcCCcHHHHHHHHHHHcCCCccCCch
Confidence 8899999999999999965 78999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhhCCCChHHHHHHHHHHHHH
Q 015697 312 QEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVP 391 (402)
Q Consensus 312 e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~~~d~~~~la~~le~~~~ 391 (402)
|+|++||.++ + +.+++++||++.+++|++||||||||||+.|||+++|+++++++ +++++++++.+||+++.
T Consensus 223 e~v~~~l~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~~~~~-~~~~~~~~a~~le~~~~ 294 (371)
T 1aj8_A 223 EEAIKQFMEI----G---SPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKL-GDKKLFEIAERLERLVE 294 (371)
T ss_dssp HHHHHHHHHH----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----c---CchhHHHHHHHHHHcCCeeecCCccccCCCCccHHHHHHHHHHc-CCCHHHHHHHHHHHHHH
Confidence 9999999886 5 46899999999999999999999999999999999999999998 67899999999999975
Q ss_pred H
Q 015697 392 P 392 (402)
Q Consensus 392 ~ 392 (402)
+
T Consensus 295 ~ 295 (371)
T 1aj8_A 295 E 295 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.9e-79 Score=615.91 Aligned_cols=289 Identities=29% Similarity=0.426 Sum_probs=269.5
Q ss_pred ccccccccccceeecceecCCCC-ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC
Q 015697 75 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT 153 (402)
Q Consensus 75 ~~~Glrgv~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~ 153 (402)
+.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.
T Consensus 3 ~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~ 73 (373)
T 1vgp_A 3 IKKGLEDVYVKETEITYIDGELGRLYYRGYSIYDLAEFS---------NFEEVSYLILYGKLPNREELNWFQEKLREERY 73 (373)
T ss_dssp CCTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCC
T ss_pred CCCccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccC
Confidence 34799999999999999999999 699999999999986 69999999999999999999999999999999
Q ss_pred CCHHHHHHHhcCCCCCChHHHHHHHHHHhhccchhhHHhhhccCCCCCCCchHHHHHHHHHhhhHHHHHHHHHHhcCCcc
Q 015697 154 VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 233 (402)
Q Consensus 154 lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~~s~f~~~y~~~~~k~~~~~~~~e~a~~LiAklp~iaa~iyr~~~~~~~~ 233 (402)
+|+.+.++++.+|+++|||++|+++|++|++++ . . + |++.++++++|||++|+|+|++||+..++ .+
T Consensus 74 lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~-------~-~---~-~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~ 140 (373)
T 1vgp_A 74 LPDFIIKFLREVRKDAQPMDILRTAVSLLGIED-------S-K---N-DERTDIKGIKLISKFPTIVANYARLRKGL-DI 140 (373)
T ss_dssp CCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHHC-------C-C---C-SSCHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred CCHHHHHHHHhCCCCCChHHHHHHHHHHHhccC-------C-C---C-hHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CC
Confidence 999999999999999999999999999998632 1 1 2 88999999999999999999999998764 47
Q ss_pred cCCCCCCCHHHHHHHhhCC--CChHHHHHHHHHHHHhccCCCCCChhHHHHHHhccCCChHHHHHHHhhcccCCccccch
Q 015697 234 IPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLAN 311 (402)
Q Consensus 234 ~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~Lil~aDHeg~n~St~aarvvaSt~sd~y~avaAgi~aL~GplHGgAn 311 (402)
++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||
T Consensus 141 i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~ST~aaRv~aSt~ad~~savaagi~aL~GplHGGAn 219 (373)
T 1vgp_A 141 IEPDPKLSHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHE-MNASTFASLVVASTFSDLYSSIVAGISALKGPLHGGAN 219 (373)
T ss_dssp CCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHH
Confidence 8899999999999999975 78999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccccCCCCCCCCCCChHHHHHHHHhhC---CCC--hHHHHHHHH
Q 015697 312 QEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDD--PLFQLVSKL 386 (402)
Q Consensus 312 e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPRa~~l~~~a~~~~---~~d--~~~~la~~l 386 (402)
|+|++||.++ + +.+++++||++.+++|++||||||||||+.|||+++|+++++++. +++ ++++++.+|
T Consensus 220 e~v~~ml~~i----~---~~~~~~~~i~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~l 292 (373)
T 1vgp_A 220 YEALKMFKEI----G---SPEKVNDYILNRLSNKQRIMGFGHRVYKTYDPRARILKQYAKLLAEKEGGEIYTLYQIAEKV 292 (373)
T ss_dssp CHHHHHHHHS----C---SSSSHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----c---CchhHHHHHHHHHHcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence 9999999875 5 457899999999999999999999999999999999999999973 555 899999999
Q ss_pred HHHHHHH
Q 015697 387 FEVVPPI 393 (402)
Q Consensus 387 e~~~~~~ 393 (402)
|+++.+.
T Consensus 293 e~~~~~~ 299 (373)
T 1vgp_A 293 EEIGIKY 299 (373)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998664
No 18
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=65.14 E-value=17 Score=36.21 Aligned_cols=61 Identities=16% Similarity=0.215 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CCH--HHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 121 PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 121 ~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
-+|-+.+|++|+|+.|++++.+.|..-|.-+.+ +.. +...++.+ ..++|-..+++|+.+|.
T Consensus 153 ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe~n~St~tarvvaS--t~ad~ysavaagi~aL~ 217 (375)
T 3tqg_A 153 LTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHEFNASTFAARVCSA--TLSDIYSAVTAAIATLR 217 (375)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHc--cCCCHHHHHHHHHHhcc
Confidence 468899999999999999999999998876543 444 34455554 34689999999999984
No 19
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=58.05 E-value=19 Score=36.42 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CCHH--HHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 121 PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPDY--VYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 121 ~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~~--v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
-++-+.++++|+|+.|++++.+.|..-|.-+.+ +... ...++.+ ..++|-..+++|+.+|.
T Consensus 195 ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe~NaST~taRvvaS--t~ad~ysavaagi~aL~ 259 (414)
T 3hwk_A 195 LGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTS--TQSDIYSAVTGAIGALK 259 (414)
T ss_dssp SCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHh--cCCCHHHHHHHHHHHhc
Confidence 368899999999999999999999998875542 4443 4444444 34679999999999984
No 20
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=57.13 E-value=32 Score=34.57 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CCH--HHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 121 PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 121 ~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
-++-+.||.+|+|+.|++++.+.|..-|.-+.+ +.. +...++.+- .++|-..+++|+.+|.
T Consensus 182 ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe~N~St~taRvvaSt--~ad~ysavaagi~aL~ 246 (404)
T 3o8j_A 182 DSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAGT--GSDVYSAIIGAIGALR 246 (404)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSSSHHHHHHHHHHTT--TCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHhc--CCCHHHHHHHHHHHcc
Confidence 468899999999999999999999998876652 444 344555543 4679999999999984
No 21
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=56.70 E-value=32 Score=34.12 Aligned_cols=61 Identities=13% Similarity=0.058 Sum_probs=46.4
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCCHHHHHHHhcCCCCCChHHHHHHHHHHh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMAL 182 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~l~~av~aL 182 (402)
+|-+.++++++|+.|++.+.+.|..-|.-+. .+...+....-.-...++|-..+.+|+++|
T Consensus 154 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aSt~~d~~savaagi~aL 216 (378)
T 1a59_A 154 DYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITSTLADLHSAVTGAIGAL 216 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCCCCchHHHHHHHhhcCCcHHHHHHHHHHHc
Confidence 5788999999999999999999998887664 244443333222234578999999999999
No 22
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=56.63 E-value=33 Score=34.17 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=47.0
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CCHHHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPDYVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
++-+.++++|+|+.|++.+.+.|..-|.-+.+ +...+....-.-...++|-..+++|+++|.
T Consensus 156 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aSt~~d~~savaagi~aL~ 219 (385)
T 2ifc_A 156 SYAESFLNAAFGRKATKEEIDAMNTALILYTDHEVPASTTAGLVAVSTLSDMYSGITAALAALK 219 (385)
T ss_dssp CHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCCccHHHHHHHHHHhcCCcHHHHHHHHHHHcc
Confidence 58899999999999999999999999876652 455444333333345689999999999983
No 23
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=56.35 E-value=33 Score=33.98 Aligned_cols=62 Identities=16% Similarity=0.165 Sum_probs=46.6
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCCHHHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
++-+.++++|+|+.|++.+.+.|..-|.-+. .+...+....-.-...++|-..+.+|+++|.
T Consensus 151 s~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~ 214 (371)
T 1aj8_A 151 SHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGSTLSDYYSAILAGIGALK 214 (371)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHcC
Confidence 5778999999999999999999998887664 2444433333223345789999999999993
No 24
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=56.31 E-value=33 Score=34.06 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=46.7
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCCHHHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
++-+.++++|+|+.|++.+.+.|..-|.-+. .+...+....-.-...++|-..+.+|+++|.
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~ 215 (377)
T 1iom_A 152 SHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFSTETDLYSAITAAVASLK 215 (377)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCchHHHHHHHhhcCCcHHHHHHHHHHHcc
Confidence 5778999999999999999999998887665 2444433333223345789999999999993
No 25
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=54.60 E-value=36 Score=33.77 Aligned_cols=62 Identities=11% Similarity=0.176 Sum_probs=46.7
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CCHHHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPDYVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
++-+.++++|+|+.|++.+.+.|..-|.-+.+ +...+....-.-...++|-..+++|+++|.
T Consensus 148 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~ST~aaRv~aSt~ad~~savaagi~aL~ 211 (373)
T 1vgp_A 148 SHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHEMNASTFASLVVASTFSDLYSSIVAGISALK 211 (373)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCccHHHHHHHHHHhcC
Confidence 57789999999999999999999999876542 444433333223345789999999999993
No 26
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=54.49 E-value=37 Score=34.15 Aligned_cols=62 Identities=18% Similarity=0.200 Sum_probs=46.7
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CCHHHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPDYVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
+|-+.++++|+|+.|++.+.+.|..-|.-+.+ +...+....-.-...++|-..+++|+++|.
T Consensus 182 s~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg~naST~aaRv~aSt~ad~~savaagi~aL~ 245 (409)
T 2ibp_A 182 GHAANFLYMMFGREPDPLASRGIDLYLILHADHEVPASTFAAHVVASTLSDLYSSVAAAIAALK 245 (409)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCCChhHHHHHHHhhcCCcHHHHHHHHHHHcc
Confidence 57889999999999999999999999876652 454433333222345789999999999993
No 27
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=54.31 E-value=39 Score=33.60 Aligned_cols=62 Identities=18% Similarity=0.178 Sum_probs=46.9
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCCHHHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
++-+.++++|+|+.|++.+.+.|..-|.-+. .+...+....-.-...++|-..+.+|+++|.
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aSt~~d~~savaagi~aL~ 215 (378)
T 1vgm_A 152 SYAESFLAATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALK 215 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCcHHHHHHHHHHhcc
Confidence 5789999999999999999999999987665 2455444333223345689999999999984
No 28
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=45.57 E-value=48 Score=32.74 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=45.8
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCCHHHHHHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVYKAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
++-+.++++|+|+.|++.+.+.|..-|.-+. .+...+....-.-...++|-..+.+|+++|.
T Consensus 145 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aSt~~d~~savaagi~aL~ 208 (363)
T 2c6x_A 145 GHVENYYYMLTGEQPSEAKKKALETYMILATEHGMNASTFSARVTLSTESDLVSAVTAALGTMK 208 (363)
T ss_dssp CSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHhcCccHHHHHHHHHHHcc
Confidence 4678999999999999999999998875443 3455444333333345689999999999983
No 29
>3u5c_P 40S ribosomal protein S15; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_R 3o30_I 3o2z_I 3u5g_P 1s1h_S 3jyv_S*
Probab=40.18 E-value=11 Score=32.60 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=18.5
Q ss_pred ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHH
Q 015697 98 IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 129 (402)
Q Consensus 98 i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~L 129 (402)
..|||++++||.+- +.|+++-|
T Consensus 15 FtyrG~~ld~Ll~m----------s~e~l~~L 36 (142)
T 3u5c_P 15 HSYRGVDLEKLLEM----------STEDFVKL 36 (142)
T ss_dssp CBSSSCBHHHHHTT----------CHHHHHHH
T ss_pred EEEccccHHHHHcC----------CHHHHHHH
Confidence 48999999999987 47887766
No 30
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=39.24 E-value=74 Score=31.53 Aligned_cols=60 Identities=13% Similarity=0.177 Sum_probs=45.9
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCCHHHH--HHHhcCCCCCChHHHHHHHHHHhh
Q 015697 122 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDYVY--KAIDALPVTAHPMTQFASGVMALQ 183 (402)
Q Consensus 122 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~v~--~~i~~lP~~~hPM~~l~~av~aL~ 183 (402)
++-+.+.++|+|+-|++.+.+.|..-|.-+. .+...+. .++.+ ..++|-..+++|+++|.
T Consensus 151 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~ad~~savaagi~aL~ 214 (377)
T 1o7x_A 151 SFAKSFLLASFAREPTTDEINAMDKALILYTDHEVPASTTAALVAAS--TLSDMYSSLTAALAALK 214 (377)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHH--TTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCChHHHHHHHHHh--cCCcHHHHHHHHHHhcC
Confidence 5788999999999999999999999886654 2454433 34433 34689999999999984
No 31
>3j20_T 30S ribosomal protein S19P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.11 E-value=11 Score=32.33 Aligned_cols=22 Identities=27% Similarity=0.490 Sum_probs=18.4
Q ss_pred ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHH
Q 015697 98 IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 129 (402)
Q Consensus 98 i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~L 129 (402)
..|||++++||.+- +.||++-|
T Consensus 6 ftyrG~~ld~L~~m----------s~~~l~~L 27 (132)
T 3j20_T 6 FRYRGYTLEQLMNM----------SLEELARL 27 (132)
T ss_dssp CCSSSSCHHHHHHH----------HHHHHHHH
T ss_pred EEEcCCcHHHHHcC----------CHHHHHHH
Confidence 47999999999997 47887766
No 32
>2xzm_S RPS15E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_S 3j0o_S 3j0l_S 3j0p_S 3j0q_S
Probab=35.39 E-value=13 Score=32.21 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=12.1
Q ss_pred ceecCCCHHHHhh
Q 015697 98 IRFRGLSIPECQK 110 (402)
Q Consensus 98 i~yRGy~I~eL~~ 110 (402)
..|||++++||.+
T Consensus 11 ftyrG~~l~~L~~ 23 (144)
T 2xzm_S 11 FTFRGKGLEELTA 23 (144)
T ss_dssp CCCCTTCHHHHHH
T ss_pred eeecCCcHHHHHh
Confidence 4899999999999
No 33
>2qsr_A Transcription-repair coupling factor; structural genomics, PSI-2, protein ST initiative; 3.10A {Streptococcus pneumoniae}
Probab=32.59 E-value=38 Score=29.80 Aligned_cols=50 Identities=22% Similarity=0.219 Sum_probs=35.4
Q ss_pred HHHHHhCC---CCCHHHHHHHHHHHHhh-CCCCHHHHHHHhcCCCCCChHHHHHHHHHHhhc
Q 015697 127 LWLLLTGK---VPSKEQVDGLSKELRDR-ATVPDYVYKAIDALPVTAHPMTQFASGVMALQV 184 (402)
Q Consensus 127 ~~LLl~G~---lPt~~ql~~f~~~L~~~-~~lp~~v~~~i~~lP~~~hPM~~l~~av~aL~~ 184 (402)
--|-+|-+ +-|.+|+++|..||..| +.+|+.|.+++.. ..|+.....++-
T Consensus 29 ~RL~lYkria~~~~~eel~~l~~EL~DRFG~lP~~v~~Ll~v--------~~lK~~a~~lgI 82 (173)
T 2qsr_A 29 HKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEI--------GLVKSYLDKVFV 82 (173)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHHHHHCSCCHHHHHHHHH--------HHHHHHHHHTTE
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCcHHHHHHHHH--------HHHHHHHHHCCC
Confidence 34444433 56899999999999888 6899999998863 345554444543
No 34
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=27.79 E-value=53 Score=31.50 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=35.9
Q ss_pred ChhhHHHHHHHHHhCCCcccccCCCCCCCCCCC-hHHHHHHHHhh
Q 015697 330 TTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPR-YTCQREFALKH 373 (402)
Q Consensus 330 s~~~~~~~v~~~l~~g~~IpGfGH~Vyr~~DPR-a~~l~~~a~~~ 373 (402)
+++++++.+.+.++.|+-|.+-||-+...++|- .+.+.+.+++.
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999888873 55566666553
No 35
>3iz6_R 40S ribosomal protein S15 (S19P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2zkq_s
Probab=26.96 E-value=13 Score=32.51 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=0.0
Q ss_pred ceecCCCHHHHhhhCCCCCCCCCCCHHHHHHH
Q 015697 98 IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 129 (402)
Q Consensus 98 i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~L 129 (402)
..|||++++||.+- +.|+++-|
T Consensus 24 FtYrG~~ld~Ll~m----------s~eel~~L 45 (154)
T 3iz6_R 24 YSYRGVDLDALLDM----------STDDLVQL 45 (154)
T ss_dssp --------------------------------
T ss_pred EEEecCcHHHHHhC----------CHHHHHHH
Confidence 38999999999986 36776555
Done!