Query 015705
Match_columns 402
No_of_seqs 151 out of 718
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 17:15:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 2E-107 6E-112 843.2 32.1 330 33-370 13-350 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 2E-102 6E-107 800.5 31.4 315 40-367 5-323 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 1.3E-99 4E-104 788.1 34.7 340 33-378 19-364 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 3.8E-90 1.3E-94 712.8 33.2 329 35-372 6-340 (451)
5 1cza_N Hexokinase type I; stru 100.0 1.1E-85 3.7E-90 728.9 34.6 322 39-368 468-795 (917)
6 2yhx_A Hexokinase B; transfera 100.0 2E-83 6.9E-88 663.6 31.3 339 38-388 6-354 (457)
7 1cza_N Hexokinase type I; stru 100.0 1.9E-71 6.6E-76 615.0 30.1 321 37-365 18-344 (917)
8 1z05_A Transcriptional regulat 98.8 1.4E-07 4.7E-12 95.6 19.6 185 43-262 58-253 (429)
9 1z6r_A MLC protein; transcript 98.8 1.8E-07 6.1E-12 93.8 19.9 189 43-262 35-231 (406)
10 2qm1_A Glucokinase; alpha-beta 98.8 1.1E-07 3.6E-12 92.0 15.7 143 95-262 6-153 (326)
11 2hoe_A N-acetylglucosamine kin 98.7 4.4E-07 1.5E-11 90.5 18.6 190 43-263 38-232 (380)
12 2ap1_A Putative regulator prot 98.5 1.5E-06 5.2E-11 84.3 14.7 138 95-262 24-165 (327)
13 2ch5_A NAGK protein; transfera 98.5 6.5E-07 2.2E-11 87.3 11.2 131 96-262 7-139 (347)
14 4db3_A Glcnac kinase, N-acetyl 98.4 3.2E-06 1.1E-10 82.6 14.3 135 96-262 25-165 (327)
15 2yhw_A Bifunctional UDP-N-acet 98.3 7.8E-06 2.7E-10 79.9 14.7 142 94-262 29-176 (343)
16 3r8e_A Hypothetical sugar kina 98.3 7.1E-06 2.4E-10 79.8 12.8 184 92-329 16-203 (321)
17 1zbs_A Hypothetical protein PG 98.2 1.1E-05 3.8E-10 77.4 13.7 124 97-261 2-126 (291)
18 3vgl_A Glucokinase; ROK family 98.2 7.1E-06 2.4E-10 79.8 12.3 135 96-262 3-141 (321)
19 1zxo_A Conserved hypothetical 98.2 2.3E-06 7.8E-11 82.2 8.3 122 97-261 2-124 (291)
20 1woq_A Inorganic polyphosphate 98.2 4.8E-05 1.6E-09 71.9 16.8 147 92-262 9-160 (267)
21 2aa4_A Mannac kinase, putative 98.2 1.7E-05 5.9E-10 75.3 12.9 134 97-262 3-140 (289)
22 3htv_A D-allose kinase, alloki 98.1 9.4E-06 3.2E-10 78.9 10.7 143 93-263 5-152 (310)
23 3mcp_A Glucokinase; structural 98.1 1.7E-05 5.8E-10 79.5 12.8 139 93-262 7-166 (366)
24 3vov_A Glucokinase, hexokinase 98.1 4.5E-05 1.5E-09 73.7 14.4 137 97-262 3-143 (302)
25 4htl_A Beta-glucoside kinase; 98.0 7.3E-05 2.5E-09 71.9 14.0 134 96-262 5-142 (297)
26 3epq_A Putative fructokinase; 97.9 9.3E-05 3.2E-09 71.8 13.6 133 96-262 4-142 (302)
27 2q2r_A Glucokinase 1, putative 97.9 7.5E-05 2.6E-09 74.0 11.7 188 95-329 29-256 (373)
28 1zc6_A Probable N-acetylglucos 97.8 0.00031 1.1E-08 67.5 14.8 124 96-261 12-139 (305)
29 2gup_A ROK family protein; sug 97.8 0.00012 4.2E-09 69.5 11.5 131 96-262 5-137 (292)
30 2e2o_A Hexokinase; acetate and 97.6 0.00017 5.9E-09 68.8 8.5 116 96-255 3-118 (299)
31 1sz2_A Glucokinase, glucose ki 97.4 0.0014 4.7E-08 63.8 13.3 184 94-329 13-212 (332)
32 1saz_A Probable butyrate kinas 96.9 0.0017 5.9E-08 64.8 7.4 145 96-262 3-194 (381)
33 3lm2_A Putative kinase; struct 96.7 0.011 3.8E-07 55.3 11.4 127 93-262 4-130 (226)
34 2p3r_A Glycerol kinase; glycer 94.9 0.055 1.9E-06 55.9 8.2 65 93-160 1-68 (510)
35 3ifr_A Carbohydrate kinase, FG 94.8 0.066 2.2E-06 55.3 8.4 63 94-159 6-71 (508)
36 3h3n_X Glycerol kinase; ATP-bi 94.5 0.1 3.5E-06 53.8 9.0 62 96-160 6-70 (506)
37 4e1j_A Glycerol kinase; struct 94.4 0.099 3.4E-06 54.2 8.7 61 96-159 27-90 (520)
38 2dpn_A Glycerol kinase; thermu 94.4 0.13 4.5E-06 52.7 9.5 61 96-159 3-66 (495)
39 3g25_A Glycerol kinase; IDP007 94.2 0.13 4.5E-06 52.8 9.0 61 96-159 7-70 (501)
40 2itm_A Xylulose kinase, xylulo 94.1 0.13 4.4E-06 52.5 8.6 59 97-158 2-63 (484)
41 3hz6_A Xylulokinase; xylulose, 94.0 0.1 3.6E-06 53.8 7.9 59 96-158 6-67 (511)
42 2w40_A Glycerol kinase, putati 94.0 0.17 5.6E-06 52.1 9.2 60 96-158 5-67 (503)
43 3l0q_A Xylulose kinase; xlylul 93.9 0.1 3.6E-06 54.3 7.6 62 96-160 6-70 (554)
44 2zf5_O Glycerol kinase; hypert 93.7 0.14 4.8E-06 52.5 8.1 61 96-159 4-67 (497)
45 3ll3_A Gluconate kinase; xylul 93.7 0.16 5.3E-06 52.4 8.4 60 96-158 5-67 (504)
46 2d4w_A Glycerol kinase; alpha 93.6 0.15 5.1E-06 52.4 8.0 61 96-159 3-66 (504)
47 3ezw_A Glycerol kinase; glycer 93.5 0.15 5.1E-06 52.8 8.0 65 93-160 2-69 (526)
48 3jvp_A Ribulokinase; PSI-II, N 93.3 0.18 6.2E-06 52.7 8.3 61 96-159 6-81 (572)
49 2uyt_A Rhamnulokinase; rhamnos 91.5 1.2 4E-05 45.3 11.4 79 96-182 5-91 (489)
50 3h6e_A Carbohydrate kinase, FG 90.1 0.36 1.2E-05 49.7 6.1 57 96-155 7-65 (482)
51 3bex_A Type III pantothenate k 90.0 0.75 2.6E-05 43.3 7.7 169 97-325 5-194 (249)
52 3i8b_A Xylulose kinase; strain 86.6 1.4 4.8E-05 45.5 7.8 52 96-153 6-58 (515)
53 3djc_A Type III pantothenate k 81.3 1.9 6.6E-05 41.0 5.7 49 97-159 4-52 (266)
54 2h3g_X Biosynthetic protein; p 81.3 14 0.00048 35.0 11.7 182 97-337 2-210 (268)
55 3h1q_A Ethanolamine utilizatio 80.0 32 0.0011 31.2 13.5 29 210-240 110-138 (272)
56 4gni_A Putative heat shock pro 73.0 17 0.00058 35.5 10.0 54 207-262 165-223 (409)
57 3i33_A Heat shock-related 70 k 70.4 18 0.00062 35.1 9.5 33 207-241 173-205 (404)
58 4ehu_A Activator of 2-hydroxyi 70.2 25 0.00084 32.3 9.9 36 226-261 75-111 (276)
59 3qfu_A 78 kDa glucose-regulate 67.5 26 0.00088 33.6 9.8 51 207-259 168-221 (394)
60 4bc3_A Xylulose kinase; transf 64.8 18 0.00063 37.2 8.6 40 219-260 269-310 (538)
61 2ych_A Competence protein PILM 50.7 52 0.0018 31.4 8.6 32 206-239 151-182 (377)
62 3mdq_A Exopolyphosphatase; str 50.2 58 0.002 31.2 8.8 62 96-157 5-68 (315)
63 2v7y_A Chaperone protein DNAK; 50.0 1.4E+02 0.0048 30.2 12.1 46 209-256 126-173 (509)
64 1hux_A Activator of (R)-2-hydr 47.3 11 0.00036 35.4 3.0 34 226-259 78-111 (270)
65 4b9q_A Chaperone protein DNAK; 45.9 15 0.00051 38.5 4.1 54 208-263 151-207 (605)
66 3hi0_A Putative exopolyphospha 45.1 52 0.0018 33.8 8.0 76 80-157 2-79 (508)
67 2fsj_A Hypothetical protein TA 42.7 25 0.00085 33.9 4.9 51 93-152 188-238 (346)
68 1t6c_A Exopolyphosphatase; alp 40.6 68 0.0023 30.7 7.7 62 96-157 13-76 (315)
69 3nuw_A 2-OXO-3-deoxygalactonat 38.2 32 0.0011 33.3 4.8 51 96-154 7-57 (295)
70 4a2a_A Cell division protein F 31.9 3.8E+02 0.013 26.4 11.8 51 206-258 168-220 (419)
71 1u6z_A Exopolyphosphatase; alp 31.5 1.2E+02 0.004 31.1 8.1 63 96-158 12-76 (513)
72 3t69_A Putative 2-dehydro-3-de 29.5 37 0.0013 33.3 3.7 53 96-155 8-60 (330)
73 1hjr_A Holliday junction resol 27.3 1.4E+02 0.0047 25.9 6.6 22 96-117 2-23 (158)
74 2kho_A Heat shock protein 70; 25.1 1.6E+02 0.0053 30.7 7.8 23 93-115 186-208 (605)
75 3aap_A Ectonucleoside triphosp 25.0 1.8E+02 0.0062 28.3 7.8 21 96-116 4-24 (353)
76 3cer_A Possible exopolyphospha 24.5 1.4E+02 0.0049 28.8 6.9 64 96-159 17-83 (343)
77 3tai_A DNA double-strand break 23.1 76 0.0026 32.5 4.6 48 50-101 24-71 (471)
78 1mul_A NS2, HU-2, DNA binding 21.0 1.4E+02 0.0048 22.9 5.0 36 38-73 4-39 (90)
79 1p71_A DNA-binding protein HU; 20.7 1.5E+02 0.0052 22.9 5.2 36 38-73 4-39 (94)
80 3qfu_A 78 kDa glucose-regulate 20.5 2.8E+02 0.0095 26.2 8.1 25 92-116 203-227 (394)
81 3rhi_A DNA-binding protein HU; 20.1 1.5E+02 0.0051 23.0 5.0 35 39-73 8-42 (93)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=1.7e-107 Score=843.16 Aligned_cols=330 Identities=37% Similarity=0.610 Sum_probs=306.1
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC--CCcceeeeccccCCCCCCccccEEEEEeCCceeEEE
Q 015705 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVL 110 (402)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~--~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~ 110 (402)
....+.+.++++.+.|.++.++|++|+++|++||++||++++ .|+++||||||+++|+|+|+|+|||||||||||||+
T Consensus 13 ~~~~~~~~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~~~~s~~~MlPTyV~~lP~G~E~G~fLAlDlGGTNfRV~ 92 (470)
T 3f9m_A 13 FQGMKKEKVEQILAEFQLQEEDLKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVM 92 (470)
T ss_dssp HHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSTTTTTTCSSCCEEEEEESSCCCCCCEEEEEEEESSSEEEEE
T ss_pred hhhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhcccCCCCCCcccccCccccCCCCCcceEEEEEEecCceEEEE
Confidence 344566777888888899999999999999999999999763 478999999999999999999999999999999999
Q ss_pred EEEEcCCc--ceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCce
Q 015705 111 RVQLGGRE--GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASG 188 (402)
Q Consensus 111 ~V~L~g~~--~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g 188 (402)
+|+|.|++ .+..++.+++|+||+++|.+++++||||||+||++|+++++.. ++++||||||||||+|+++++|
T Consensus 93 ~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~-----~~~lpLGfTFSFP~~Q~sl~~g 167 (470)
T 3f9m_A 93 LVKVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK-----HKKLPLGFTFSFPVRHEDIDKG 167 (470)
T ss_dssp EEEEEC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS-----SSCCEEEEEECSCEEEEETTEE
T ss_pred EEEECCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc-----ccccceEEEEeccccccCCCce
Confidence 99998765 3456667789999999999999999999999999999987653 3689999999999999999999
Q ss_pred EEEecccceecCCCCCCcHHHHHHHHHHHcC-CCceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeeecccCCCC
Q 015705 189 DLIKWTKGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIP 267 (402)
Q Consensus 189 ~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~-l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~ 267 (402)
+|++|||||++++++|+||+++|++|++|++ ++|+|+||||||||||||++|.+++|+||+|+|||||+||+|++++|+
T Consensus 168 ~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGtNa~Y~E~~~~I~ 247 (470)
T 3f9m_A 168 ILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVE 247 (470)
T ss_dssp EECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCT
T ss_pred EEEeccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCCceEEeeeccccc
Confidence 9999999999999999999999999999998 799999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcEEEEeccCCcCCCC---CCCCccchhhcccCCCCCcceeeeeccccchhHHHHHHHHHHHHccCCCCCC
Q 015705 268 KWHGLLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDT 344 (402)
Q Consensus 268 k~~~~~~~~~~miINtEwG~Fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRlill~l~~~~~lF~~~ 344 (402)
|+++ ..++||||||||+||+++ +|+|+||+++|++|.|||+|+|||||||||||||+|+||++|++++.||++.
T Consensus 248 k~~~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~ 324 (470)
T 3f9m_A 248 LVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGE 324 (470)
T ss_dssp TSSC---CSSEEEEECCGGGTTTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHHHHHHHHHHHHTTCSGGGC
T ss_pred cccC---CCCcEEEeechhhcCCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHHHHHHHHHHHHhCcCcCCC
Confidence 9986 457899999999999765 5799999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCcccchhHHHHhhcCCcc
Q 015705 345 VPPKLKIPFILRCVFCAFALLLSNSV 370 (402)
Q Consensus 345 ~~~~l~~~~~l~t~~ls~~~~~~~~~ 370 (402)
.|++|.+||+|+|++||+|+.+..+.
T Consensus 325 ~~~~L~~~~~l~T~~ls~ie~d~~~~ 350 (470)
T 3f9m_A 325 ASEQLRTRGAFETRFVSQVESDTGDR 350 (470)
T ss_dssp CCTTTTSTTCSCHHHHHHHHTCCSSC
T ss_pred CcHHhcCCCCcCchHHhhhccCCCch
Confidence 99999999999999999998765554
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-102 Score=800.53 Aligned_cols=315 Identities=41% Similarity=0.641 Sum_probs=295.0
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeeccccCCCCCCccccEEEEEeCCceeEEEEEEEcCCcc
Q 015705 40 ILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (402)
Q Consensus 40 ~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L~g~~~ 119 (402)
.++++.++|.++.++|++|+++|+.||++||++++ |+++||||||+++|+|+|+|+|||||+|||||||++|+|.|+
T Consensus 5 ~~~~~~~~f~l~~~~L~~i~~~f~~em~~GL~~~~-s~~~MlPtyv~~~P~G~E~G~~LAlDlGGTn~RV~~V~l~g~-- 81 (445)
T 3hm8_A 5 LLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEA-SSLRMLPTFVRATPDGSERGDFLALDLGGTNFRVLLVRVTTG-- 81 (445)
T ss_dssp HHHHHHGGGSCCHHHHHHHHHHHHHHHHHHHHTSC-CSSCCEECCCCSSCCSCCCEEEEEEEESSSSEEEEEEEESSS--
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCCCCCCceeeEEEEEEecCCeEEEEEEEECCc--
Confidence 44566666779999999999999999999999865 789999999999999999999999999999999999999764
Q ss_pred eeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEecccceec
Q 015705 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (402)
Q Consensus 120 ~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~wtKgF~~ 199 (402)
.++.+++|+||+++|.+++++||||||+||++|+++++.. ++++||||||||||+|+++++|+|++|||||++
T Consensus 82 --~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~-----~~~lplGftFSFP~~Q~sl~~g~Li~wtKGF~~ 154 (445)
T 3hm8_A 82 --VQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLS-----GQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKA 154 (445)
T ss_dssp --EEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCT-----TCCCCEEEEECSCEECSSTTCCEECCCCTTCCC
T ss_pred --eEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcc-----cccCcceEEEeeeeEeccCCceEEEEeeccccC
Confidence 4455678999999999999999999999999999987653 467999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHHHHHc-CCCceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeeecccCCCCccCCCCCCCCc
Q 015705 200 EDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGE 278 (402)
Q Consensus 200 ~~v~G~Dv~~lL~~al~r~-~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~ 278 (402)
++++|+||+++|++|++|+ +++++|+||+||||||||+++|.+++|.||+|+|||||+||+|++++|+|+++ ..++
T Consensus 155 ~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGtNa~y~e~~~~i~k~~~---~~~~ 231 (445)
T 3hm8_A 155 SDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPG---DSGR 231 (445)
T ss_dssp BTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEEGGGCTTSCC---CSSE
T ss_pred CCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCceEEEEEecccccccCC---CCCc
Confidence 9999999999999999998 58999999999999999999999999999999999999999999999999976 3568
Q ss_pred EEEEeccCCcCCCCC---CCCccchhhcccCCCCCcceeeeeccccchhHHHHHHHHHHHHccCCCCCCCCCCcCCCCcc
Q 015705 279 MVINMEWGNFRSSHL---PLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPFIL 355 (402)
Q Consensus 279 miINtEwG~Fg~~~l---p~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRlill~l~~~~~lF~~~~~~~l~~~~~l 355 (402)
||||||||+||++++ |+|+||+++|++|.|||+|+||||+||||||||+|+||++|++++.||++..|++|.+||+|
T Consensus 232 miINtEwG~Fg~~~~l~~~~T~~D~~lD~~S~~PG~q~fEKmiSG~YLGEivRliL~~l~~~~~lf~~~~~~~L~~~~~l 311 (445)
T 3hm8_A 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLTSLGVLFRGQQIQRLQTRDIF 311 (445)
T ss_dssp EEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTGGGTSHHHHHHHHHHHHHHHHHHTSSGGGCCCGGGGSTTCS
T ss_pred EEEEcchhhcCCCCCCcCCCCccchHHhcCCCCCCceEeeeecchhhHHHHHHHHHHHHHHcCCCCCCCCcHHHcCCCCC
Confidence 999999999998764 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhhcC
Q 015705 356 RCVFCAFALLLS 367 (402)
Q Consensus 356 ~t~~ls~~~~~~ 367 (402)
+|++||+|+.++
T Consensus 312 ~T~~ls~ie~D~ 323 (445)
T 3hm8_A 312 KTKFLSEIESDS 323 (445)
T ss_dssp CHHHHHHHTCTT
T ss_pred CcHHHHHHhcCC
Confidence 999999997653
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=1.3e-99 Score=788.12 Aligned_cols=340 Identities=36% Similarity=0.562 Sum_probs=312.9
Q ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeeccccCCCCCCccccEEEEEeCCceeEEEEE
Q 015705 33 RWARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (402)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V 112 (402)
.+.++.+.+++++++|.++.++|++|+++|++||++||++++ ++++||||||+++|+|+|+|.|||||+|||||||++|
T Consensus 19 ~~~~~~~~~~~~~~~f~~~~~~L~~i~~~f~~em~~GL~~~~-~~~~MlPt~V~~lP~G~E~G~~LalDlGGTn~Rv~~V 97 (485)
T 3o8m_A 19 VPANLMEQIHGLETLFTVSSEKMRSIVKHFISELDKGLSKKG-GNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLV 97 (485)
T ss_dssp SCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHSSSC-CSSCCEECCCCSCCCSCCEEEEEEEEESSSEEEEEEE
T ss_pred CcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhccCC-CCCcccCCCCCCCCCCCcceEEEEEEecCCeEEEEEE
Confidence 455788899999999999999999999999999999999865 6899999999999999999999999999999999999
Q ss_pred EEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEe
Q 015705 113 QLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIK 192 (402)
Q Consensus 113 ~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~ 192 (402)
+|.|++.. +...++|+||++++++++++||||||+||++|+++++... .++.+|+||||||||+|+++++|+|++
T Consensus 98 ~l~g~~~~--~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~---~~~~l~lGftfSfP~~q~~i~~g~li~ 172 (485)
T 3o8m_A 98 KLGGNHDF--DTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDG---VSEPLPLGFTFSYPASQKKINSGVLQR 172 (485)
T ss_dssp EEESSSCE--EEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTC---CSSCEEEEEEECSCEECSBTTCCEECC
T ss_pred EECCCCce--EEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhcccc---cccccceEEEEeeeEEEcccCCEEEee
Confidence 99887643 3445689999999999999999999999999999986432 146799999999999999999999999
Q ss_pred cccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeeecccCCCCccCC-
Q 015705 193 WTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG- 271 (402)
Q Consensus 193 wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~- 271 (402)
|||||++++++|+||+++|++|++|+|++|+|+||+||||||||+++|.+++|.||+|+|||||+||+|++++|+|+++
T Consensus 173 wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~~i~k~~~~ 252 (485)
T 3o8m_A 173 WTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGL 252 (485)
T ss_dssp CCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCGGGTTT
T ss_pred ccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeecccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred ---CCCCCCcEEEEeccCCcCCC--CCCCCccchhhcccCCCCCcceeeeeccccchhHHHHHHHHHHHHccCCCCCCCC
Q 015705 272 ---LLPKSGEMVINMEWGNFRSS--HLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVP 346 (402)
Q Consensus 272 ---~~~~~~~miINtEwG~Fg~~--~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRlill~l~~~~~lF~~~~~ 346 (402)
..+.+++||||||||+||+. .+|+|+||+++|++|.|||+|+|||||||||||||+|+||++|++++.||++..|
T Consensus 253 ~~~~~~~~~~miINtEwG~F~~~~~~lp~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEivRlil~~l~~~~~lF~~~~~ 332 (485)
T 3o8m_A 253 LPEDIGPDSPMAINCEYGSFDNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDI 332 (485)
T ss_dssp CCTTSCTTCEEEEECCGGGTTTTCSSSCCCHHHHHHHHHSSSTTSCHHHHHHSTTTHHHHHHHHHHHHHHTTSSSTTSCC
T ss_pred ccccCCCCCcEEEEcccccCCCCcccCCCCchhhHHhhcCCCCCceeeccccccchHHHHHHHHHHHHHHcCcccCCCCc
Confidence 23445789999999999865 3899999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCcccchhHHHHhhcCCcchHHHHHhh
Q 015705 347 PKLKIPFILRCVFCAFALLLSNSVISSLYRNL 378 (402)
Q Consensus 347 ~~l~~~~~l~t~~ls~~~~~~~~~~~~~~~~~ 378 (402)
++|.+||+|+|++||+|+.+....+..+...|
T Consensus 333 ~~L~~~~~l~T~~ls~i~~d~~~~l~~~~~~l 364 (485)
T 3o8m_A 333 SKLKEAYVMDTSYPSKIEDDPFENLEDTDDLF 364 (485)
T ss_dssp GGGGSTTCSCTHHHHHHHHCCCTTCHHHHHHH
T ss_pred HHhcCCCCcCcHHHHHHHcCCcchHHHHHHHH
Confidence 99999999999999999987666665555554
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=3.8e-90 Score=712.81 Aligned_cols=329 Identities=36% Similarity=0.627 Sum_probs=304.7
Q ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhcc--CCCCcceeeeccccCCCCCCccccEEEEEeCCceeEEEEE
Q 015705 35 ARAVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLAS--EGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRV 112 (402)
Q Consensus 35 ~~~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~--~~~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V 112 (402)
+.+.+.+++|.+.|.++.++|++|+++|..||++||++ ++.|+++||||||+++|+|+|+|.|||||||||||||++|
T Consensus 6 ~~~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V 85 (451)
T 1bdg_A 6 QQLFEKVVEILKPFDLSVVDYEEICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSV 85 (451)
T ss_dssp HHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSCCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhcccCCCCCcccccccccCCCCCCCccceEEEEEeCCCeEEEEEE
Confidence 34667888999999999999999999999999999983 3347899999999999999999999999999999999999
Q ss_pred EEcC-CcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEE
Q 015705 113 QLGG-REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLI 191 (402)
Q Consensus 113 ~L~g-~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li 191 (402)
++.| ++. .+...++|+||.+++.+++++||||||+||++|+++++.. .+.+|+||||||||+|+++++|+|+
T Consensus 86 ~l~G~~~~--~~i~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~~~lG~tfsfPv~q~~~~~G~l~ 158 (451)
T 1bdg_A 86 TLEGKGKS--PRIQERTYCIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLGFTFSFPCVQKGLTHATLV 158 (451)
T ss_dssp EECC-CCC--CEEEEEEECCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCC-----SSCEEEEEEECSCEEEETTTEEEEC
T ss_pred ecCCCCcc--eEEEEEEEecCCcccCCCHHHHHHHHHHHHHHHHHhcCCC-----ccccceEEEEeeEeccccCCCeEEe
Confidence 9988 542 3334468999999999999999999999999999987642 3569999999999999999999999
Q ss_pred ecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeeecccCCCCccCC
Q 015705 192 KWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHG 271 (402)
Q Consensus 192 ~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~ 271 (402)
+|||||++++++|+||+++|+++++|+++||+|+||+|||||||++++|.+++|.||+|+|||+|+||+|+.++|+|+++
T Consensus 159 ~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG~na~yve~~~~i~~~~g 238 (451)
T 1bdg_A 159 RWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDG 238 (451)
T ss_dssp CCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCGGGCS
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCCcceEEEEcCccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCcEEEEeccCCcCCCC---CCCCccchhhcccCCCCCcceeeeeccccchhHHHHHHHHHHHHccCCCCCCCCCC
Q 015705 272 LLPKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPK 348 (402)
Q Consensus 272 ~~~~~~~miINtEwG~Fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRlill~l~~~~~lF~~~~~~~ 348 (402)
. +.++|+||+|||.||+++ +|+|+||..+|..|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..|++
T Consensus 239 ~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLgel~R~~l~~~~~~~~lf~~~~~~~ 316 (451)
T 1bdg_A 239 V--KEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPER 316 (451)
T ss_dssp C--SSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCSG
T ss_pred C--ccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHHHHHHHHHHhhcccccccccchHh
Confidence 3 457899999999998776 89999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccchhHHHHhhcCCcchH
Q 015705 349 LKIPFILRCVFCAFALLLSNSVIS 372 (402)
Q Consensus 349 l~~~~~l~t~~ls~~~~~~~~~~~ 372 (402)
|.++|+|+|++||+|+.+..+.+.
T Consensus 317 l~~~~~l~t~~ls~i~~d~~~~~~ 340 (451)
T 1bdg_A 317 LKVRNSLLTRYLTDVERDPAHLLY 340 (451)
T ss_dssp GGSTTCSCTTHHHHHTTCCTTCCH
T ss_pred hcCCCccchHHHhhhhccCccchH
Confidence 999999999999999877666554
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=1.1e-85 Score=728.86 Aligned_cols=322 Identities=40% Similarity=0.619 Sum_probs=297.1
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC--CCCcceeeeccccCCCCCCccccEEEEEeCCceeEEEEEEEcC
Q 015705 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE--GGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGG 116 (402)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~--~~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L~g 116 (402)
+.++++.++|.++.++|++|+++|++||++||+++ +.|+++||||||+++|+|+|+|.|||||||||||||++|++.+
T Consensus 468 ~~i~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~~~~~mlpt~v~~~P~G~E~G~~lalDlGGTn~Rv~~V~l~~ 547 (917)
T 1cza_N 468 RQIEETLAHFHLTKDMLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLLVKIRS 547 (917)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHSHHHHTTCSSCCEECSCCSCCCSCCCEEEEEEEESSSSEEEEEEEEEC
T ss_pred hhHHHHHhhhcCCHHHHHHHHHHHHHHHHHHhcccCCCCCCCceECCCCCCCCCCCcceEEEEEEECCCcEEEEEEEeCC
Confidence 34567777788999999999999999999999853 3478999999999999999999999999999999999999964
Q ss_pred CcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEecccc
Q 015705 117 REGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKG 196 (402)
Q Consensus 117 ~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~wtKg 196 (402)
....+.++.+++|+||.+++.+++++||||||+||.+|+++++.. .+.+||||||||||+|+++++|+|++||||
T Consensus 548 g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~-----~~~l~lG~tfsfPv~q~~i~~~~L~~WtKg 622 (917)
T 1cza_N 548 GKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMPLGFTFSFPCQQTSLDAGILITWTKG 622 (917)
T ss_dssp STTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCC-----SSCCEEEEEECSCEEEEETTEEEECCCCTT
T ss_pred CcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCC-----ccceeEEEEeeccccccccCccEECceecc
Confidence 333356666779999999999999999999999999999987643 356899999999999999999999999999
Q ss_pred eecCCCCCCcHHHHHHHHHHHc-CCCceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeeecccCCCCccCCCCCC
Q 015705 197 FSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPK 275 (402)
Q Consensus 197 F~~~~v~G~Dv~~lL~~al~r~-~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~ 275 (402)
|++++++|+||+++|+++++|+ +++|+++||+|||||||++++|.+++|.||+|+|||||+||+|+.++|+++.+ +
T Consensus 623 f~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG~na~y~e~~~~i~~~~g---~ 699 (917)
T 1cza_N 623 FKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEG---D 699 (917)
T ss_dssp CCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSEEEEEEEETTTCTTSSC---C
T ss_pred cccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCCeeEEEEEcCccccCcCC---C
Confidence 9999999999999999999988 69999999999999999999999999999999999999999999999999875 3
Q ss_pred CCcEEEEeccCCcCCCC---CCCCccchhhcccCCCCCcceeeeeccccchhHHHHHHHHHHHHccCCCCCCCCCCcCCC
Q 015705 276 SGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIP 352 (402)
Q Consensus 276 ~~~miINtEwG~Fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRlill~l~~~~~lF~~~~~~~l~~~ 352 (402)
.++|+||||||+||+++ +|+|+||+++|+.|.|||+|+||||+||+|||||+|++|+++.+++.+|.+..|++|.++
T Consensus 700 ~g~m~In~EwG~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~ 779 (917)
T 1cza_N 700 QGQMCINMEWGAFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTR 779 (917)
T ss_dssp SSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTST
T ss_pred cCcEEEecccccCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHHHHHHHHHhcccccccccccchhhccC
Confidence 56899999999999876 589999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhHHHHhhcCC
Q 015705 353 FILRCVFCAFALLLSN 368 (402)
Q Consensus 353 ~~l~t~~ls~~~~~~~ 368 (402)
++|+|++||+|+.+..
T Consensus 780 ~~~~t~~ls~ie~d~~ 795 (917)
T 1cza_N 780 GIFETKFLSQIESDRL 795 (917)
T ss_dssp TCSCHHHHHHHTCSSC
T ss_pred CccchHHhhhhhcCcc
Confidence 9999999999976554
No 6
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=2e-83 Score=663.57 Aligned_cols=339 Identities=19% Similarity=0.250 Sum_probs=302.1
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCCCcceeeeccccCCCCCCccccEEEEEeCCceeEEEEEEEcCC
Q 015705 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGR 117 (402)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L~g~ 117 (402)
++.+++|.+.|.++.++|++|+++|..||+ ||++++ |+++||||||+++|+|+|+|.|||||+||||+||++|++.|+
T Consensus 6 ~~~~~~~~~~f~~~~~~L~~i~~~~~~em~-gL~~~~-~~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 6 XSLVEVHXXVFIVPPXILQAVVSILTTRXD-DXDSSA-ASIPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HHHSSS-CSSCCEECCCCCCCCSCCCEEEEEEEECSSEEEEEEEEEETT
T ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHHHhc-CCCCCC-CCCccCccccCCCCCCCccceEEEEEeCCCeEEEEEEEeCCC
Confidence 456778888888999999999999999999 998754 679999999999999999999999999999999999999876
Q ss_pred cceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEecccce
Q 015705 118 EGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGF 197 (402)
Q Consensus 118 ~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~wtKgF 197 (402)
.. .+...+++++|.+.+.+++++||||||++|.+|+++++.. .++.+++|||||||++|+++++|+|++|||||
T Consensus 84 ~~--~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~----~~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf 157 (457)
T 2yhx_A 84 QE--SSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSS----XAGSVPLGFTFXEAGAKEXVIKGQITXQAXAF 157 (457)
T ss_dssp EE--EEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSS----CSSCEEEEEECCSCCCCSBTTCCBCSSCCTTC
T ss_pred ee--EEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccc----cccccceeeEEEEEEEEeecCceEEEeeccCC
Confidence 42 3444568999999899999999999999999999986532 13568999999999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeeecccCCCCccCCCC-C-C
Q 015705 198 SIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL-P-K 275 (402)
Q Consensus 198 ~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~-~-~ 275 (402)
++++++ ||+++|+++++|++++++|++|+|||+||+|+++|.++++.||+|+|||+|+||+|+.++|+|+++.. + .
T Consensus 158 ~i~~~~--~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~~~~~iglilGTGvgg~~i~~~~~i~kl~~~~~~~~ 235 (457)
T 2yhx_A 158 SLAXLX--KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGVNAAYWCDSTXIGDAADGGXXGG 235 (457)
T ss_dssp CCSSCS--SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEECGGGSSCTTSCSSSCS
T ss_pred CcchhH--HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcCCccEEEEEECcEEEEEEEECCCccccccccccccc
Confidence 999988 99999999999999999999999999999999999999999999999999999999999999996531 2 3
Q ss_pred CCcEEEEeccCCcCCCC--CCCCccchhhcccCCCCCcceeeeeccccchhHHHHHHHHHHHHccCCCCCCCCCCcCCCC
Q 015705 276 SGEMVINMEWGNFRSSH--LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLKIPF 353 (402)
Q Consensus 276 ~~~miINtEwG~Fg~~~--lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRlill~l~~~~~lF~~~~~~~l~~~~ 353 (402)
.+.|+||||||+|++++ +|+|+||+++|..|.||| |+||||+||||||||+|++|++|.+++.||++ .|++|.+||
T Consensus 236 ~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pG-q~fEkm~SG~yLGel~R~il~~~~~~~~lf~~-~~~~l~~~~ 313 (457)
T 2yhx_A 236 AGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAX-KTFXKNSXAKNXGQSLRDVLMXFKXXGQXHXX-XAXSFXAAN 313 (457)
T ss_dssp SCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSC-CHHHHHHCGGGHHHHHHHHHHHHHHTTSSSSS-CCCSCCSTT
T ss_pred CCceEEEEEcccCCCCCCcCCccccccccccccCchH-HHHHHHhhhcCcHHHHHHHHHHHhcccccccc-cchhccccc
Confidence 67899999999998654 899999999999999999 99999999999999999999999999999999 999999999
Q ss_pred cccchhHHHHhhcCCcchH---HHHHhhhc---chhhhhhh
Q 015705 354 ILRCVFCAFALLLSNSVIS---SLYRNLLS---MDEVYFLI 388 (402)
Q Consensus 354 ~l~t~~ls~~~~~~~~~~~---~~~~~~~~---~~~~~~~~ 388 (402)
+|+|++||+++.+..+.+. .++...+. ..+|..++
T Consensus 314 ~~~t~~ls~i~~d~~~~l~~~~~il~~~~~~~~t~~D~~~v 354 (457)
T 2yhx_A 314 VENTSYPAKIQKLPHFDLRXXXDLFXGDQGIAXKTXMKXVV 354 (457)
T ss_dssp CSCTHHHHHHHHCCSSSCHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred CcChHHHHHHhcCCchhhhHHHHHHHHHhCCCccchhhHHH
Confidence 9999999999876555554 34422233 35665444
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=1.9e-71 Score=615.02 Aligned_cols=321 Identities=38% Similarity=0.598 Sum_probs=294.5
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC--CCcceeeeccccCCCCCCccccEEEEEeCCceeEEEEEEE
Q 015705 37 AVAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASEG--GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQL 114 (402)
Q Consensus 37 ~~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~--~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L 114 (402)
+.+.+++|.+.|.++.++|++|+++|+.||++||+++. .|+++||||||+++|+|+|+|.|||||+||||+||++|++
T Consensus 18 ~~~~~~~~~~~f~~~~~~l~~i~~~~~~em~~gL~~~~~~~s~~~mlpt~v~~~P~G~E~G~~laiDlGGTnirv~lv~~ 97 (917)
T 1cza_N 18 QVKKIDKYLYAMRLSDETLIDIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQV 97 (917)
T ss_dssp HHHHHHHHTGGGSCCHHHHHHHHHHHHHHHHHHHCTTTGGGCSSCCEECCCCSCCCSCCCEEEEEEEESSSSEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCCCCCCcccccccccCCCCCCCCcceEEEEEeCCCeEEEEEEEe
Confidence 44567888899999999999999999999999998653 4789999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEecc
Q 015705 115 GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWT 194 (402)
Q Consensus 115 ~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~wt 194 (402)
.|++...++...+++++|.+++.+++++||||||++|.+|+++++.. .+.+++|||||||++|+++++|+|++||
T Consensus 98 ~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~-----~~~~~lGi~fs~P~~q~~~~~G~l~~wt 172 (917)
T 1cza_N 98 NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGFTFSFPCQQSKIDEAILITWT 172 (917)
T ss_dssp EEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT-----TSCCCEEEEECSCEECSSTTCCEECCCC
T ss_pred cCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC-----CCcccEEEEEccccccCcCCceEEEecc
Confidence 87644444445568999998888899999999999999999887542 2457999999999999999999999999
Q ss_pred cceecCCCCCCcHHHHHHHHHHHcC-CCceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeeecccCCCCccCCCC
Q 015705 195 KGFSIEDTVGEDVVGELTKAMERIG-LDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYVERAHAIPKWHGLL 273 (402)
Q Consensus 195 KgF~~~~v~G~Dv~~lL~~al~r~~-l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~ 273 (402)
|||++++++|+||+++|+++++|++ +++++++|+|||+||+++.+|.++++.||+|+|||+|+||+++..+|+++.+.
T Consensus 173 kgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGvngg~i~~g~~i~~~~G~- 251 (917)
T 1cza_N 173 KRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGD- 251 (917)
T ss_dssp TTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGGGCTTSSCC-
T ss_pred cCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCcceEEEecCcccccccCC-
Confidence 9999999999999999999999997 89999999999999999999999999999999999999999999999998763
Q ss_pred CCCCcEEEEeccCCcCCCC---CCCCccchhhcccCCCCCcceeeeeccccchhHHHHHHHHHHHHccCCCCCCCCCCcC
Q 015705 274 PKSGEMVINMEWGNFRSSH---LPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIVRRVLCRMAEEANFFGDTVPPKLK 350 (402)
Q Consensus 274 ~~~~~miINtEwG~Fg~~~---lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRlill~l~~~~~lF~~~~~~~l~ 350 (402)
.++|+||+|||.|++++ .|+|+||..+|..+.|||+|+||||+||+||||++|+++.++.+++.+|.+..|+.|.
T Consensus 252 --~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel~r~~l~~~~~~~~~~~~~~~~~l~ 329 (917)
T 1cza_N 252 --EGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELL 329 (917)
T ss_dssp --SSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHHHHHHHHHHHHTTSSGGGCCCTTTT
T ss_pred --CCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHHHHHHHHHhhccccccccccchhhc
Confidence 46799999999998765 4699999999999999999999999999999999999999999999899888899999
Q ss_pred CCCcccchhHHHHhh
Q 015705 351 IPFILRCVFCAFALL 365 (402)
Q Consensus 351 ~~~~l~t~~ls~~~~ 365 (402)
+++.++|+++|+++.
T Consensus 330 ~~~~l~t~~vs~~~~ 344 (917)
T 1cza_N 330 TRGKFNTSDVSAIEK 344 (917)
T ss_dssp STTSSCHHHHHHHTC
T ss_pred cccccChHHHHHHhc
Confidence 999999999999974
No 8
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.85 E-value=1.4e-07 Score=95.65 Aligned_cols=185 Identities=16% Similarity=0.196 Sum_probs=121.9
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCC----C---cceeeeccccCCCCCCccccEEEEEeCCceeEEEEEEEc
Q 015705 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----S---KLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLG 115 (402)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~----s---~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L~ 115 (402)
++.+...++...+..+.+++.+ +||-.+.. | .-+.+-++. | +.+.+|++|+|||++|++++++.
T Consensus 58 ela~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~s~~GR~~~~l~~~---~---~~~~~lGIDiGgt~i~~~l~d~~ 128 (429)
T 1z05_A 58 DLSKESELAPASITKITRELID---AHLIHETTVQEAISRGRPAVGLQTN---N---LGWQFLSMRLGRGYLTIALHELG 128 (429)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---TTSEEEECHHHHHHHTSCCEEEEEC---C---TTEEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCCEEeccccCCCCCCCCCeEEEEC---C---CCCEEEEEEECCCEEEEEEECCC
Confidence 4455566777777777777765 56532110 0 011222222 2 45679999999999999999987
Q ss_pred CCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEeccc
Q 015705 116 GREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTK 195 (402)
Q Consensus 116 g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~wtK 195 (402)
|+ +.... .++.|. .+.+++++.|++.|.+++++.+... .+..-+|+...-|++. ++|++. +..
T Consensus 129 G~---il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~---~~g~v~-~~~ 191 (429)
T 1z05_A 129 GE---VLIDT--KIDIHE----IDQDDVLARLLFEIEEFFQTYAAQL----DRVTSIAITLPGLVNS---EQGIVL-QMP 191 (429)
T ss_dssp SC---EEEEE--EEECCC----CBHHHHHHHHHHHHHHHHHHTTTTC----CEEEEEEEEESSEEET---TTTEEE-ECS
T ss_pred CC---EEEEE--EEcCCC----CCHHHHHHHHHHHHHHHHHhcCCCc----CceEEEEEeccCcEeC---CCCeEe-ecC
Confidence 64 23322 344443 2478999999999999998765321 2334566666666665 346554 333
Q ss_pred ceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc----CCCceEEEEeecCeeeeeecc
Q 015705 196 GFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVER 262 (402)
Q Consensus 196 gF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----~~~~~iGlIlGTGtNacY~E~ 262 (402)
.+. ..+.++.+.|++.+ ++| +.|.||+.+..++-.+. +.+..+.+++|||..++++.+
T Consensus 192 ~l~---w~~~~l~~~L~~~~---~~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 253 (429)
T 1z05_A 192 HYN---VKNLALGPEIYKAT---GLP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLD 253 (429)
T ss_dssp SSB---CSSBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred CCC---CCCCCHHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEEC
Confidence 332 23568888888776 454 58999999998876543 457889999999999999875
No 9
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.84 E-value=1.8e-07 Score=93.80 Aligned_cols=189 Identities=12% Similarity=0.124 Sum_probs=123.1
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhccCCC----CcceeeeccccCCCCCCccccEEEEEeCCceeEEEEEEEcCCc
Q 015705 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEGG----SKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGRE 118 (402)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~~----s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L~g~~ 118 (402)
++.+...++...+..+.+++.+ +||=.+.. +.----|+.+.--| +.+.+|++|+|||++|++++++.|+
T Consensus 35 ~la~~~~ls~~tv~~~v~~L~~---~g~i~~~~~~~~~~~GR~~~~l~~~~---~~~~~lgiDiG~t~i~~~l~d~~G~- 107 (406)
T 1z6r_A 35 DLSRLAQLAPASITKIVHEMLE---AHLVQELEIKEAGNRGRPAVGLVVET---EAWHYLSLRISRGEIFLALRDLSSK- 107 (406)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH---HTSEEEC-------------CEEECC---TTCEEEEEEEETTEEEEEEEETTCC-
T ss_pred HHHHHHCCCHHHHHHHHHHHHH---CCcEEeecccCCCCCCCCCeEEEEcC---CccEEEEEEEcCCEEEEEEEcCCCC-
Confidence 5566677888888888777765 67632211 11111222222112 3567999999999999999998764
Q ss_pred ceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEeccccee
Q 015705 119 GRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFS 198 (402)
Q Consensus 119 ~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~wtKgF~ 198 (402)
+.... .++.|. .+.+++++.+++.|.+++++.+... .+..-+|+.+.-|++. ++|++. +...+
T Consensus 108 --il~~~--~~~~~~----~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~---~~g~v~-~~~~l- 170 (406)
T 1z6r_A 108 --LVVEE--SQELAL----KDDLPLLDRIISHIDQFFIRHQKKL----ERLTSIAITLPGIIDT---ENGIVH-RMPFY- 170 (406)
T ss_dssp --EEEEE--EEECCS----SCSSCHHHHHHHHHHHHHHHTGGGC----CCEEEEEEEESSEEET---TTTEEE-ECTTC-
T ss_pred --EEEEE--EecCCC----CCHHHHHHHHHHHHHHHHHhcCCCc----CceeEEEEEeecCEeC---CCCEEe-cCCCC-
Confidence 23322 333332 3568899999999999998764321 1334566666666665 356666 33332
Q ss_pred cCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc----CCCceEEEEeecCeeeeeecc
Q 015705 199 IEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILGTGTNAAYVER 262 (402)
Q Consensus 199 ~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----~~~~~iGlIlGTGtNacY~E~ 262 (402)
++..+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+.+|||..++++.+
T Consensus 171 -~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 231 (406)
T 1z6r_A 171 -EDVKEMPLGEALEQHT---GVP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITD 231 (406)
T ss_dssp -TTCSSBCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred -CCccCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEEC
Confidence 2334678888888876 454 57899999998876542 457789999999999999875
No 10
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.79 E-value=1.1e-07 Score=91.96 Aligned_cols=143 Identities=18% Similarity=0.222 Sum_probs=98.7
Q ss_pred ccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeee
Q 015705 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (402)
Q Consensus 95 G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGf 174 (402)
+.+|++|+|||++|++++++.|+ +.... .++.|.. .+.+++++.+++.|.+++++.+... .+..-+|+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGV---VQQKW--SIETNIL---EDGKHIVPSIIESIRHRIDLYNMKK----EDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEEE--EEECCCT---TTTTTHHHHHHHHHHHHHHHTTCCG----GGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCC---EEEEE--EEcCCCC---CCHHHHHHHHHHHHHHHHHHcCCCc----cceeEEEE
Confidence 46899999999999999998663 33322 3444432 3568899999999999998765321 12233444
Q ss_pred eeeeeeeeccCCceEEEecccceecCCCCCC-cHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc----cCCCceEEE
Q 015705 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAV 249 (402)
Q Consensus 175 TFSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~-Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay----~~~~~~iGl 249 (402)
...=|++. ++|+++ ++..+ +-.+. ++.+.|++.+ ++| +.|.||+.+..++-.+ .+.+..+.+
T Consensus 74 ~~pG~vd~---~~g~v~-~~~~l---~w~~~~~l~~~l~~~~---~~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~l 140 (326)
T 2qm1_A 74 GTPGSVDI---EKGTVV-GAYNL---NWTTVQPVKEQIESAL---GIP---FALDNDANVAALGERWKGAGENNPDVIFI 140 (326)
T ss_dssp EESSEEET---TTTEEE-CBGGG---TBCSCBCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred ecccceeC---CCCEEE-ecCCC---CccCCchHHHHHHHHh---CCC---EEEecHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 44444544 346554 23223 22356 8888888776 444 5789999999887654 345788999
Q ss_pred EeecCeeeeeecc
Q 015705 250 ILGTGTNAAYVER 262 (402)
Q Consensus 250 IlGTGtNacY~E~ 262 (402)
++|||..++++.+
T Consensus 141 ~~GtGiG~giv~~ 153 (326)
T 2qm1_A 141 TLGTGVGGGIVAA 153 (326)
T ss_dssp EESSSEEEEEEET
T ss_pred EECCceEEEEEEC
Confidence 9999999999875
No 11
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.73 E-value=4.4e-07 Score=90.50 Aligned_cols=190 Identities=13% Similarity=0.172 Sum_probs=119.6
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhhccCC---CCcceeeeccccCCCCCCccccEEEEEeCCceeEEEEEEEcCCcc
Q 015705 43 EMEEKCGTPIGKLRQVADAMTVEMHAGLASEG---GSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREG 119 (402)
Q Consensus 43 ~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~~---~s~l~MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L~g~~~ 119 (402)
++.+...++...+..+.+++.+ +||=.+. .+.-=--|+.+.-- .+.+.+|++|+|||++|++++++.|+
T Consensus 38 ~la~~~gls~~tv~~~v~~L~~---~gli~~~~~~~~~~GR~~~~l~~~---~~~~~~lGIDiGgt~i~~~l~d~~G~-- 109 (380)
T 2hoe_A 38 ELAEELGLTKTTVGEIAKIFLE---KGIVVEEKDSPKGVGRPTKSLKIS---PNCAYVLGIEVTRDEIAACLIDASMN-- 109 (380)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHH---HTSEEEEECCC----CCCEEEEEC---GGGCEEEEEEECSSEEEEEEEETTCC--
T ss_pred HHHHHHCcCHHHHHHHHHHHHH---CCCEEeecCCCCCCCCCceEEEEc---cCCCeEEEEEECCCEEEEEEECCCCC--
Confidence 4455566888888888777755 6763211 11100111111111 23567999999999999999998764
Q ss_pred eeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeeeeeeeeeccCCceEEEecccceec
Q 015705 120 RVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTFSFPVRQTSIASGDLIKWTKGFSI 199 (402)
Q Consensus 120 ~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTFSFP~~Q~~i~~g~Li~wtKgF~~ 199 (402)
+.... .++.|.. .+.+++++.+++.|.+++++.+... .+..-+|+...=|++. .+|++. +...+
T Consensus 110 -vl~~~--~~~~~~~---~~~~~~~~~l~~~i~~~~~~~~~~~----~~i~gigi~~pG~vd~---~~g~v~-~~~~l-- 173 (380)
T 2hoe_A 110 -ILAHE--AHPLPSQ---SDREETLNVMYRIIDRAKDMMEKLG----SKLSALTVAAPGPIDT---ERGIII-DPRNF-- 173 (380)
T ss_dssp -EEEEE--EEECCSS---CCHHHHHHHHHHHHHHHHHHHHHTT----CCCCEEEEEESSCEET---TTTEEC-CCSSC--
T ss_pred -EEEEE--EEccCCC---CCHHHHHHHHHHHHHHHHHhcCCCc----CcEEEEEEEeeccEEC---CCCEEe-ccCCC--
Confidence 33322 3444432 2578999999999999998754211 1223344444445554 245544 22223
Q ss_pred CCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCC--CceEEEEeecCeeeeeeccc
Q 015705 200 EDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK--DAIAAVILGTGTNAAYVERA 263 (402)
Q Consensus 200 ~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~--~~~iGlIlGTGtNacY~E~~ 263 (402)
+..+.++.+.|++.+ ++ .+.|.||+.+..++-.+... +..+.+++|||..++++.+-
T Consensus 174 -~w~~~~l~~~l~~~~---~~---pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~G 232 (380)
T 2hoe_A 174 -PLSQIPLANLLKEKY---GI---EVWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIIDG 232 (380)
T ss_dssp -TTBTSCHHHHHHHHH---CS---EEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEETT
T ss_pred -CCcCCChHHHHHHHh---CC---CEEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEECC
Confidence 223578888888876 34 36899999999888655332 78899999999999998763
No 12
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=98.51 E-value=1.5e-06 Score=84.34 Aligned_cols=138 Identities=19% Similarity=0.290 Sum_probs=94.2
Q ss_pred ccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeee
Q 015705 95 GLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGF 174 (402)
Q Consensus 95 G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGf 174 (402)
+.+|++|+|||++|++++++.|+ +... ..++.+.. +.+++++.|.+.+.++..+.+. ..-+|+
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~---il~~--~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~--------i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRR---LQWE--KRVPTPHT----SYSAFLDAVCELVEEADQRFGV--------KGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCC---EEEE--EEEECCCS----CHHHHHHHHHHHHHHHHHHHTS--------CCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCC---EEEE--EEecCCCC----CHHHHHHHHHHHHHHHHHhcCC--------ccEEEE
Confidence 35899999999999999998663 2322 23444431 4678999999988888765421 123555
Q ss_pred eeeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc----CCCceEEEE
Q 015705 175 TFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVI 250 (402)
Q Consensus 175 TFSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----~~~~~iGlI 250 (402)
...=|++. ++|+++ ++ ..+...+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.++
T Consensus 87 ~~pG~vd~---~~g~v~-~~---~~~~~~~~~l~~~l~~~~---~~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~ 153 (327)
T 2ap1_A 87 GIPGMPET---EDGTLY-AA---NVPAASGKPLRADLSARL---DRD---VRLDNDANCFALSEAWDDEFTQYPLVMGLI 153 (327)
T ss_dssp EESSBSCC---TTSCCB-CT---TCTTTTTSCHHHHHHHHH---TSC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEE
T ss_pred EeeeeEEC---CCCEEE-cc---CCCccCCCChHHHHHHHH---CCC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEE
Confidence 55545554 234443 22 122335678888888876 344 68999999988876543 356789999
Q ss_pred eecCeeeeeecc
Q 015705 251 LGTGTNAAYVER 262 (402)
Q Consensus 251 lGTGtNacY~E~ 262 (402)
+|||..++++.+
T Consensus 154 ~GtGiG~giv~~ 165 (327)
T 2ap1_A 154 LGTGVGGGLVLN 165 (327)
T ss_dssp ESSSEEEEEEET
T ss_pred ECCcEEEEEEEC
Confidence 999999999875
No 13
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.47 E-value=6.5e-07 Score=87.27 Aligned_cols=131 Identities=17% Similarity=0.200 Sum_probs=82.7
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfT 175 (402)
.+|+||+|||++|++++++.|+ +.... ... |......+.+++++.|++.|.+++++.+... ..-..|..
T Consensus 7 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~-----~~~i~gig 75 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSEDGK---ILAEA--DGL-STNHWLIGTDKCVERINEMVNRAKRKAGVDP-----LVPLRSLG 75 (347)
T ss_dssp EEEEEEECTTCEEEEEEETTSC---EEEEE--EEC-CCCHHHHCHHHHHHHHHHHHHHHHHHHTCCT-----TCCBSEEE
T ss_pred EEEEEEcCccceEEEEEeCCCC---EEEEE--eCC-CCCcccCCHHHHHHHHHHHHHHHHHhcCCCc-----ccceeEEE
Confidence 5899999999999999998664 22222 121 1111113568999999999999998765321 10123333
Q ss_pred eeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCC--ceEEEEEechhHhhhcccccCCCceEEEEeec
Q 015705 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLD--MRVAALVNDTIGTLAGGRYHNKDAIAAVILGT 253 (402)
Q Consensus 176 FSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~--v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGT 253 (402)
++.| +.+..+-...|.+.|+++ ++ ...+.|.||+.+..++ .+ .+..+.+++||
T Consensus 76 i~~p---------------------G~vd~~~~~~l~~~l~~~-~~~~~~pv~v~NDa~aaa~a-~~--~~~~v~v~~GT 130 (347)
T 2ch5_A 76 LSLS---------------------GGDQEDAGRILIEELRDR-FPYLSESYLITTDAAGSIAT-AT--PDGGVVLISGT 130 (347)
T ss_dssp EEET---------------------TTTCHHHHHHHHHHHHHH-CTTSBSCEEEEEHHHHHHHH-HC--SSCEEEEEESS
T ss_pred Eecc---------------------CCCchHHHHHHHHHHHHh-cCCCCceEEEECcHHHHHHh-hC--CCCcEEEEEcC
Confidence 3333 322111123445555554 21 1246899999999998 44 35678999999
Q ss_pred Ceeeeeecc
Q 015705 254 GTNAAYVER 262 (402)
Q Consensus 254 GtNacY~E~ 262 (402)
|.+++.+.+
T Consensus 131 Gig~~~v~~ 139 (347)
T 2ch5_A 131 GSNCRLINP 139 (347)
T ss_dssp SEEEEEECT
T ss_pred CceeEEEcC
Confidence 999987653
No 14
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.41 E-value=3.2e-06 Score=82.64 Aligned_cols=135 Identities=19% Similarity=0.305 Sum_probs=94.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfT 175 (402)
-+|++|+|||++|++++++.|+ +.... .++.|.. +.+++++.|++.|.+++.+.+. ..|+.
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~----------~~gig 85 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEKLE---RVATE--RVPTPTD----DYPLLLETIAGLVAKYDQEFAC----------EGKIG 85 (327)
T ss_dssp CEEEEEECSSEEEEEEECTTCC---EEEEE--EEECCTT----CHHHHHHHHHHHHHHHHHHHTS----------CCEEE
T ss_pred EEEEEEECCCEEEEEEEeCCCc---EEEEE--EecCCCC----CHHHHHHHHHHHHHHHHHhcCC----------ccEEE
Confidence 5899999999999999988664 33322 4555532 5788999999999988775431 24555
Q ss_pred eeee--eeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc----CCCceEEE
Q 015705 176 FSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAV 249 (402)
Q Consensus 176 FSFP--~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----~~~~~iGl 249 (402)
++.| ++. .+|++. .+ . .....+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+.+
T Consensus 86 i~~pG~vd~---~~g~v~-~~-~--~~~~~~~~l~~~l~~~~---~~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l 152 (327)
T 4db3_A 86 LGLPGMEDA---DDATVL-TV-N--VPAAKGKPLRADLEAKI---GRS---VKIENDANCFALSEAWDEELQDAPSVMGL 152 (327)
T ss_dssp EEESEEECT---TTCCEE-ES-S--SGGGTTSCHHHHHHHHH---SSC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEE
T ss_pred EEeeccEeC---CCCEEE-cC-C--CccccCCCHHHHHHHHH---CCC---EEEecchhHHHHHHHHhCCCCCCCcEEEE
Confidence 5555 442 345543 22 1 22234678888888776 455 58899999988877653 45678999
Q ss_pred EeecCeeeeeecc
Q 015705 250 ILGTGTNAAYVER 262 (402)
Q Consensus 250 IlGTGtNacY~E~ 262 (402)
.+|||..++++.+
T Consensus 153 ~~GtGiG~gii~~ 165 (327)
T 4db3_A 153 ILGTGFGGGLIYE 165 (327)
T ss_dssp EESSSEEEEEEET
T ss_pred EeCccceEEEEEC
Confidence 9999999999876
No 15
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.32 E-value=7.8e-06 Score=79.90 Aligned_cols=142 Identities=25% Similarity=0.260 Sum_probs=95.4
Q ss_pred cccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeee
Q 015705 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELG 173 (402)
Q Consensus 94 ~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLG 173 (402)
.+.+|++|+|||++|++++++.|+ +.... .++.|. +.+++++.+.+.+.+++.+.... ..-.+|
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~-----~~~~~~~~i~~~i~~~~~~~~~~------~~~i~g 92 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGE---IVKKY--TQFNPK-----TYEERINLILQMCVEAAAEAVKL------NCRILG 92 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEECCS-----SHHHHHHHHHHHHHHHHHHHHHT------TEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCc---EEEEE--EEcCCC-----CHHHHHHHHHHHHHHHHHhcccc------cCceEE
Confidence 457899999999999999998663 23322 333342 46788999999999998764321 112356
Q ss_pred eeeeeee--eeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc----CCCceE
Q 015705 174 FTFSFPV--RQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIA 247 (402)
Q Consensus 174 fTFSFP~--~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----~~~~~i 247 (402)
+.+|.|= +. ++|+++.-+. + .++-.+.++.+.|++.+ ++| +.|.||..+..++-.+. +.+..+
T Consensus 93 igi~~pG~vd~---~~g~v~~~~~-~-~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~v 161 (343)
T 2yhw_A 93 VGISTGGRVNP---REGIVLHSTK-L-IQEWNSVDLRTPLSDTL---HLP---VWVDNDGNCAALAERKFGQGKGLENFV 161 (343)
T ss_dssp EEEEESSEEET---TTTEEEECCT-T-SSSCSSEECHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSTTTTCSCEE
T ss_pred EEEecccCEeC---CCCEEEeCCc-C-CCCCcCCCHHHHHHHHH---CCC---EEEechhHHHHHHHHHhCCCCCCCcEE
Confidence 6666654 43 3465552111 1 01223567888888765 444 58899999998886542 446789
Q ss_pred EEEeecCeeeeeecc
Q 015705 248 AVILGTGTNAAYVER 262 (402)
Q Consensus 248 GlIlGTGtNacY~E~ 262 (402)
-+++|||..++++.+
T Consensus 162 ~i~~GtGiG~gii~~ 176 (343)
T 2yhw_A 162 TLITGTGIGGGIIHQ 176 (343)
T ss_dssp EEEESSSEEEEEEET
T ss_pred EEEECCCEEEEEEEC
Confidence 999999999999875
No 16
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.26 E-value=7.1e-06 Score=79.80 Aligned_cols=184 Identities=15% Similarity=0.162 Sum_probs=113.0
Q ss_pred CccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceee
Q 015705 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (402)
Q Consensus 92 ~E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lp 171 (402)
...+.+|++|+|||++|++++++.|+ +.... .++.|. ..+.+++++.|++.|.++++. .. +..-
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~---il~~~--~~~~~~---~~~~~~~~~~i~~~i~~~~~~-~~-------~i~g 79 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGE---IQNAT--RFMTAD---WVNGIGFVESMKLEIGNFLKQ-YP-------IVKG 79 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCC---EEEEE--EEEHHH---HHTTTCHHHHHHHHHHHHHHH-CT-------TCCE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCc---EEEEE--EEeCCC---CCCHHHHHHHHHHHHHHHHhc-cC-------CeeE
Confidence 35667999999999999999988653 33322 344432 125688999999999999862 11 1233
Q ss_pred eeeeeeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc----cCCCceE
Q 015705 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIA 247 (402)
Q Consensus 172 LGfTFSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay----~~~~~~i 247 (402)
+|+...=|++. ++|++..-+ .+ ++..+.++.+.|++.+. + + .+.|.||..+..++-.+ .+.+..+
T Consensus 80 igi~~pG~vd~---~~g~v~~~~-~l--~~w~~~~l~~~l~~~~~--~--~-pV~v~NDa~aaalaE~~~g~~~~~~~~v 148 (321)
T 3r8e_A 80 VGIGWPGLVSL---DRTKVILLP-NI--PSVVNVPIVEILRSEFP--H--I-HFKIENDAKCAALGEYYFGENKRMQTFI 148 (321)
T ss_dssp EEEEESSEECT---TSCCEEEBT-TB--CCCCSCCHHHHHHHHCT--T--S-EEEEEEHHHHHHHHHHHHSTTTTCSSEE
T ss_pred EEEEecccEEC---CCCEEEeCC-CC--ccccCCCHHHHHHHHcC--C--C-CEEEEchHHHHHHHHHHhCCCCCCCcEE
Confidence 44444444542 356555322 11 22335678877776542 3 3 36899999998777654 3457789
Q ss_pred EEEeecCeeeeeecccCCCCccCCCCCCCCcEEEEeccCCcCCCCCCCCccchhhcccCCCCCcceeeeeccccchhHHH
Q 015705 248 AVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEALDTESLNPGEQIFEKIISGMYLGEIV 327 (402)
Q Consensus 248 GlIlGTGtNacY~E~~~~I~k~~~~~~~~~~miINtEwG~Fg~~~lp~T~~D~~lD~~S~nPG~q~fEKmiSG~YLGEiv 327 (402)
-+.+|||.-++++.+-.- +.+.. -.--|||.. + ..| .-.+|..+|+..|-+.+
T Consensus 149 ~l~~GtGiG~gii~~G~l---~~G~~------g~aGEiGh~-----~--~~~-----------~gclE~~~S~~al~~~~ 201 (321)
T 3r8e_A 149 LLALGTGVGSGVMMNGKL---FIGGR------GNGTEVGHM-----L--TTR-----------GKSLENQVGINHLIAYT 201 (321)
T ss_dssp EEEESSSEEEEEEETTEE---CCCTT------SCCCCGGGC-----B--CTT-----------SSBSHHHHSHHHHHHHH
T ss_pred EEEECCceEEEEEECCEE---ecCCC------CCCcccccc-----c--CCC-----------CCcHHHhcCHHHHHHHH
Confidence 999999999999875221 11110 012355543 1 111 45789999998876665
Q ss_pred HH
Q 015705 328 RR 329 (402)
Q Consensus 328 Rl 329 (402)
+.
T Consensus 202 ~~ 203 (321)
T 3r8e_A 202 HE 203 (321)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 17
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=98.25 E-value=1.1e-05 Score=77.38 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=74.1
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeee
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTF 176 (402)
+|+||+|||+.|+++++ .|+ +.... ..+ |......+.+++++.|++.+.+.+.... .+ ..|..+
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~---il~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~-------~~--i~~igi 65 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGK---SLGRF--QTS-GINPFQQDRNEIDTALRSEVLPAIGQKA-------SS--IRAVYF 65 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTE---EEEEE--EEE-CCCTTTSCHHHHHHHHTTTTHHHHTTST-------TT--CCEEEE
T ss_pred EEEEEeCccceEEEEEe-CCe---EEEEE--ECC-CCCcccCCHHHHHHHHHHHHHHHhCCCc-------cc--ccEEEE
Confidence 79999999999999998 552 33222 111 2112122467788888887776542110 01 234444
Q ss_pred eeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCc-eEEEEEechhHhhhcccccCCCceEEEEeecCe
Q 015705 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDM-RVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (402)
Q Consensus 177 SFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v-~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGt 255 (402)
+.| +.. .+-...|++.|+++ ++. ..+.|.||..+..++.. ..+..+.+|+|||.
T Consensus 66 g~p---------------------G~~-~~~~~~l~~~l~~~-~~~~~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGi 120 (291)
T 1zbs_A 66 YGA---------------------GCT-PAKAPMLNEALDSM-LPHCDRIEVAGDMLGAARALC--GDSEGIACILGTGS 120 (291)
T ss_dssp EET---------------------TCC-TTTHHHHHHHHHHH-STTCSEEEEECHHHHHHHHHT--TTSCEEEEEESSSE
T ss_pred ECC---------------------CCC-hHHHHHHHHHHHHh-cCCCCcEEEeCcHHHHHHhhc--CCCCcEEEEecCCh
Confidence 444 211 11012445555544 233 36799999999998853 44667999999999
Q ss_pred eeeeec
Q 015705 256 NAAYVE 261 (402)
Q Consensus 256 NacY~E 261 (402)
+++.+.
T Consensus 121 gg~~i~ 126 (291)
T 1zbs_A 121 NSCLFD 126 (291)
T ss_dssp EEEEEC
T ss_pred heEEEC
Confidence 976654
No 18
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.24 E-value=7.1e-06 Score=79.77 Aligned_cols=135 Identities=20% Similarity=0.234 Sum_probs=90.8
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfT 175 (402)
.+|++|+|||++|++++++.|+- .... .++.| .+.+++++.|++.|.+++++. + ..|+.
T Consensus 3 ~~lgiDiGgt~i~~~l~d~~G~i---~~~~--~~~~~-----~~~~~~~~~i~~~i~~~~~~~---------~--i~gig 61 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDEEGRI---LSTF--KVATP-----PTAEGIVDAICAAVAGASEGH---------D--VEAVG 61 (321)
T ss_dssp EEEEEEECSSEEEEEEECTTCCB---CCCE--EEECC-----SSHHHHHHHHHHHHHHHHTTC---------C--EEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCCE---EEEE--EeeCC-----CCHHHHHHHHHHHHHHHHhhc---------C--ceEEE
Confidence 57999999999999999886642 2211 23333 247899999999999987542 1 35556
Q ss_pred eeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc----cCCCceEEEEe
Q 015705 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVIL 251 (402)
Q Consensus 176 FSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay----~~~~~~iGlIl 251 (402)
++.|=-- ..++|++.. +-.+ +-.+.++.+.|++.+ ++| +.|.||..+..++-.+ .+.+..+.+.+
T Consensus 62 i~~pG~v-d~~~g~v~~-~~~l---~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 130 (321)
T 3vgl_A 62 IGAAGYV-DDKRATVLF-APNI---DWRHEPLKDKVEQRV---GLP---VVVENDANAAAWGEYRFGAGQGHDDVICITL 130 (321)
T ss_dssp EEESSEE-CTTSSCEEE-CSSS---CCEEECHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred EeccccE-eCCCCEEEe-CCCC---CCcCCCHHHHHhhhh---CCC---EEEEehhhhHHHHHHHhCCCCCCCCEEEEEe
Confidence 6665321 112344432 1111 123467788887766 454 6799999999887544 34578899999
Q ss_pred ecCeeeeeecc
Q 015705 252 GTGTNAAYVER 262 (402)
Q Consensus 252 GTGtNacY~E~ 262 (402)
|||.-++++.+
T Consensus 131 GtGiG~gii~~ 141 (321)
T 3vgl_A 131 GTGLGGGIIIG 141 (321)
T ss_dssp SSSEEEEEEET
T ss_pred CcceEEEEEEC
Confidence 99999999876
No 19
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=98.22 E-value=2.3e-06 Score=82.15 Aligned_cols=122 Identities=20% Similarity=0.153 Sum_probs=62.7
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeee
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTF 176 (402)
||+||+|||+.|+++++ .|+ +.... ..+ |......+.+++++.|++.+.+.+.... ..|+.+
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~---il~~~--~~~-~~~~~~~~~~~~~~~i~~~i~~~~~~~~-----------i~~igi 63 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGA---VIKRL--GTK-GINPFFQSEEEIQQKLTASLLPQLPEGK-----------FNAVYF 63 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSS---EEEEE--EEC-CCCTTTSCSTTTTTTTTC------------------------CEE
T ss_pred EEEEEeccccEEEEEEc-CCe---EEEEE--ECC-CCCcccCCHHHHHHHHHHHHHHhcCccc-----------ccEEEE
Confidence 68999999999999997 553 22222 111 1111122345566666665555432110 124444
Q ss_pred eeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCc-eEEEEEechhHhhhcccccCCCceEEEEeecCe
Q 015705 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDM-RVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (402)
Q Consensus 177 SFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v-~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGt 255 (402)
+.|=-- .. .+. .|++.|+++ ++. ..+.|.||+.+.+++.. ..+..+.+|+|||.
T Consensus 64 g~pG~~--~~----------------~~~----~l~~~l~~~-~~~~~pv~v~NDa~~aalge~--g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 64 YGAGCT--PE----------------KAP----VLRRAIADS-LPVIGNIKANSDMLAAAHGLC--GQKAGIACILGTGS 118 (291)
T ss_dssp ECTTCC--TT----------------TTH----HHHHHHHHH-SCCCSCCEEECSHHHHHHHTT--TTSCBEEEEESSSE
T ss_pred EcCCCC--HH----------------HHH----HHHHHHHHh-cCCCceEEEECcHHHHHHhhc--CCCCcEEEEeCCCh
Confidence 444210 00 012 344555444 222 24689999999999764 44567899999999
Q ss_pred eeeeec
Q 015705 256 NAAYVE 261 (402)
Q Consensus 256 NacY~E 261 (402)
+++.+.
T Consensus 119 ~g~gi~ 124 (291)
T 1zxo_A 119 NSCFYN 124 (291)
T ss_dssp EEEEEC
T ss_pred heEEEC
Confidence 855543
No 20
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=98.20 E-value=4.8e-05 Score=71.91 Aligned_cols=147 Identities=18% Similarity=0.260 Sum_probs=94.6
Q ss_pred CccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceee
Q 015705 92 DEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (402)
Q Consensus 92 ~E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lp 171 (402)
.+...++++|+|||++|++++++.+. .+.. ....++.|.. .+.+++++.|++.+.+++++.... ....-
T Consensus 9 ~~~~~~lgidiggt~i~~~l~dl~~g--~i~~-~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~~-----~~~~~ 77 (267)
T 1woq_A 9 HKNAPLIGIDIGGTGIKGGIVDLKKG--KLLG-ERFRVPTPQP---ATPESVAEAVALVVAELSARPEAP-----AAGSP 77 (267)
T ss_dssp --CCCEEEEEECSSEEEEEEEETTTT--EEEE-EEEEEECCSS---CCHHHHHHHHHHHHHHHHTSTTCC-----CTTCC
T ss_pred CCCCEEEEEEECCCEEEEEEEECCCC--eEEE-EEEecCCCcc---CCHHHHHHHHHHHHHHHHHhcccc-----Cccce
Confidence 44556899999999999999998632 2221 1123444421 246889999999999998653211 01123
Q ss_pred eeeeeeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc----CCC-ce
Q 015705 172 LGFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKD-AI 246 (402)
Q Consensus 172 LGfTFSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----~~~-~~ 246 (402)
+|+...=|++ +|+++ ++-.+. ++-.+.++.+.|++.+ ++| +.|.||.-+..++-.+. +.+ ..
T Consensus 78 igi~~pG~v~-----~g~v~-~~~~l~-~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~g~~~~~~~~~ 144 (267)
T 1woq_A 78 VGVTFPGIIQ-----HGVVH-SAANVD-KSWLNTDIDALLTARL---GRP---VEVINDADAAGLAEARYGAGAGVKGTV 144 (267)
T ss_dssp EEEEESSCEE-----TTEEC-CCTTSC-GGGTTCBHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHSTTTTCCSEE
T ss_pred EEEEccceEc-----CCEEE-eCCCCC-CCCCCCCHHHHHHHHH---CCC---EEEeehhHHHHHHHHHhCCCCCCCCcE
Confidence 5655555665 45543 332221 0223578888888776 444 68999999998886542 233 46
Q ss_pred EEEEeecCeeeeeecc
Q 015705 247 AAVILGTGTNAAYVER 262 (402)
Q Consensus 247 iGlIlGTGtNacY~E~ 262 (402)
+.+.+|||.-++.+.+
T Consensus 145 ~~l~~GtGIG~giv~~ 160 (267)
T 1woq_A 145 LVITLGTGIGSAFIFD 160 (267)
T ss_dssp EEEEESSSEEEEEEET
T ss_pred EEEEECcceEEEEEEC
Confidence 7899999999999875
No 21
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=98.16 E-value=1.7e-05 Score=75.28 Aligned_cols=134 Identities=16% Similarity=0.212 Sum_probs=88.4
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeee
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTF 176 (402)
+|++|+|||++|++++++.|+ +.... .++.+.. .+.+++++.|.+.+.+++.+. .-+|+..
T Consensus 3 ~lgidiggt~~~~~l~d~~g~---il~~~--~~~~~~~---~~~~~~~~~i~~~i~~~~~~~-----------~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGADGQ---IRDRR--ELPTPAS---QTPEALRDALSALVSPLQAHA-----------QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECTTCC---EEEEE--EEECCSS---CCHHHHHHHHHHHHTTTGGGC-----------SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECCCCC---EEEEE--EecCCCC---CCHHHHHHHHHHHHHHHHhhC-----------CEEEEEe
Confidence 799999999999999988653 33322 3444432 246788888888777664321 1356555
Q ss_pred eeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc----CCCceEEEEee
Q 015705 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----NKDAIAAVILG 252 (402)
Q Consensus 177 SFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----~~~~~iGlIlG 252 (402)
.=|++. ++|++. ++-.+ ++-.+.++.+.|++.+ ++| +.|.||..+..++-.+. +. ..+-+++|
T Consensus 64 pG~vd~---~~g~v~-~~~~~--~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~G 130 (289)
T 2aa4_A 64 TGIIRD---GSLLAL-NPHNL--GGLLHFPLVKTLEQLT---NLP---TIAINDAQAAAWAEFQALDGDIT-DMVFITVS 130 (289)
T ss_dssp SSEEET---TEEECS-SGGGG--GGGTTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEES
T ss_pred ccceeC---CCCEEE-eCCCC--CcccCCChHHHHHHHH---CCC---EEEechHHHHHHHHHHhCCCCCc-eEEEEEeC
Confidence 555654 234443 22222 1223567888888765 444 57899999998876543 33 78999999
Q ss_pred cCeeeeeecc
Q 015705 253 TGTNAAYVER 262 (402)
Q Consensus 253 TGtNacY~E~ 262 (402)
||..++++.+
T Consensus 131 tGiG~gii~~ 140 (289)
T 2aa4_A 131 TGVGGGVVSG 140 (289)
T ss_dssp SSEEEEEEET
T ss_pred ccEEEEEEEC
Confidence 9999999865
No 22
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=98.14 E-value=9.4e-06 Score=78.91 Aligned_cols=143 Identities=17% Similarity=0.200 Sum_probs=89.5
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeee
Q 015705 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (402)
Q Consensus 93 E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpL 172 (402)
+.+.+|++|+|||++|++++++.|+ +.... .++.|+. ..+++++.|++.|.+++++.+. -..
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~---------~i~ 66 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGE---TLHCE--KKRTAEV----IAPGLVSGIGEMIDEQLRRFNA---------RCH 66 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSC---EEEEE--EEEHHHH----HTTCHHHHHHHHHHHHHHHHTE---------EEE
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCC---EEEEE--EecCccc----cHHHHHHHHHHHHHHHHHhcCC---------Cee
Confidence 4567999999999999999998764 33322 2333322 2567888888888888766431 135
Q ss_pred eeeeeee--eeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc---cCCCceE
Q 015705 173 GFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY---HNKDAIA 247 (402)
Q Consensus 173 GfTFSFP--~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay---~~~~~~i 247 (402)
|+.++.| ++. ++|+++.- -.+...+.-+.++.+.|++.+ ++| +.|.||.-+..++... ...+..+
T Consensus 67 gigi~~pG~vd~---~~g~v~~~-~~l~~~~~~~~~l~~~l~~~~---~~p---v~v~NDanaaa~~e~~~~~~~~~~~~ 136 (310)
T 3htv_A 67 GLVMGFPALVSK---DKRTIIST-PNLPLTAADLYDLADKLENTL---NCP---VEFSRDVNLQLSWDVVENRLTQQLVL 136 (310)
T ss_dssp EEEEEESSCBCT---TSSCBCSC-CSSSCCHHHHTTHHHHHHHHH---TSC---EEEEEHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEEEeccccEeC---CCCEEEeC-CCCCCccccCccHHHHHHHHh---CCC---EEEeeHHHHHHHHHHhhcccCCceEE
Confidence 6666666 432 23443321 111111101135666776655 454 5889999987654321 2345678
Q ss_pred EEEeecCeeeeeeccc
Q 015705 248 AVILGTGTNAAYVERA 263 (402)
Q Consensus 248 GlIlGTGtNacY~E~~ 263 (402)
.+.+|||.-++.+..-
T Consensus 137 ~v~~GtGiG~gii~~G 152 (310)
T 3htv_A 137 AAYLGTGMGFAVWMNG 152 (310)
T ss_dssp EEEESSSEEEEEEETT
T ss_pred EEEeceeEEEEEEECC
Confidence 9999999999998763
No 23
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=98.14 E-value=1.7e-05 Score=79.52 Aligned_cols=139 Identities=22% Similarity=0.274 Sum_probs=91.2
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHH---HHHHHHHhcCCCCCCCCCce
Q 015705 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAA---ALAKFVATEGEGFHVSPGRQ 169 (402)
Q Consensus 93 E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~---~I~~fl~~~~~~~~~~~~~~ 169 (402)
+.+.+|++|+|||++|+++++ .|+ +.... ..++.+.. +.+++++.|++ .+.+++. . +.
T Consensus 7 d~~~~lgiDIGgt~i~~~l~d-~G~---il~~~-~~~~~~~~----~~~~~l~~i~~~~~~i~~~~~---~-------~i 67 (366)
T 3mcp_A 7 DNRIVMTLDAGGTNFVFSAIQ-GGK---EIADP-VVLPACAD----CLDKCLGNLVEGFKAIQAGLP---E-------AP 67 (366)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-TTE---ECSCC-EEEECCTT----CHHHHHHHHHHHHHHHHTTCS---S-------CC
T ss_pred CCCEEEEEEECcceEEEEEEE-CCE---EEEEE-EEEECCCC----CHHHHHHHHHHHHHHHHHHhh---c-------CC
Confidence 456789999999999999998 653 22111 13444432 57888888888 6655532 0 12
Q ss_pred eeeeeeeeeeeeeccCCceEEEecccceecCCCC-CCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc-------
Q 015705 170 RELGFTFSFPVRQTSIASGDLIKWTKGFSIEDTV-GEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH------- 241 (402)
Q Consensus 170 lpLGfTFSFP~~Q~~i~~g~Li~wtKgF~~~~v~-G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~------- 241 (402)
.-+|+.+.=|++. ++|++.. +-.+ ++-. |.|+.+.|++.+ ++| |.|.||.-+..++-.+.
T Consensus 68 ~gIGIavPG~Vd~---~~G~i~~-~~nl--p~w~~~~~l~~~L~~~~---g~P---V~veNDanaaAlgE~~~G~~p~~~ 135 (366)
T 3mcp_A 68 VAISFAFPGPADY---QAGIIGD-LPNF--PSFRGGVALGPFLEDIF---GIP---VFINNDGSLFAYGEALTGVLPEIN 135 (366)
T ss_dssp CEEEEECCSSEET---TTTEECC-CTTC--GGGTTCBCHHHHHHHHH---CSC---EEEECHHHHHHHHHHHTSHHHHHH
T ss_pred eEEEEEecceEeC---CCCEEEe-CCCc--ccccCCCCHHHHHHHHH---CCC---EEEechhhHHHHHHHHhCCCcccc
Confidence 3344444445654 3465542 2222 2233 678888888776 455 68999998887765443
Q ss_pred ----------CCCceEEEEeecCeeeeeecc
Q 015705 242 ----------NKDAIAAVILGTGTNAAYVER 262 (402)
Q Consensus 242 ----------~~~~~iGlIlGTGtNacY~E~ 262 (402)
+.+..+.+.+|||.-++.+.+
T Consensus 136 ~~l~~~g~~~~~~~~v~l~lGtGIG~givi~ 166 (366)
T 3mcp_A 136 RRLREAGSTKRYKNLLGVTLGTGFGAGVVID 166 (366)
T ss_dssp HHHHHTTCCCCCCEEEEEEESSSEEEEEEET
T ss_pred cccccccccCCCCcEEEEEECCcceEEEEEC
Confidence 346789999999999999875
No 24
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=98.09 E-value=4.5e-05 Score=73.67 Aligned_cols=137 Identities=18% Similarity=0.176 Sum_probs=91.2
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeee
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTF 176 (402)
+|++|+|||++|++++++.+ +.. ...++.|.. ..+++++.|++.+.+++++... +..-+|+..
T Consensus 3 ~lgiDiGgt~i~~~l~d~~~----~l~--~~~~~~~~~----~~~~~~~~i~~~i~~~~~~~~~-------~i~gigi~~ 65 (302)
T 3vov_A 3 VVGLDLGGTKIAAGVFDGKR----LLS--KVVVPTPKE----GGERVAEALAEAAERAEREAGV-------RGEAIGLGT 65 (302)
T ss_dssp EEEEEECSSEEEEEEECSSS----BSC--CEEEECCSS----CHHHHHHHHHHHHHHHHHHHTC-------CCSSEEEEE
T ss_pred EEEEEEcCCEEEEEEEeCCC----cEE--EEEEcCCCC----ChHHHHHHHHHHHHHHHhhccC-------CceEEEEEe
Confidence 78999999999999998752 121 223444532 2389999999999999876421 122344444
Q ss_pred eeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc----cCCCceEEEEee
Q 015705 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVILG 252 (402)
Q Consensus 177 SFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay----~~~~~~iGlIlG 252 (402)
.=|++. ++|++.. .- +.++-.+.++.+.|++.+ ++| +.|.||..+..++-.+ .+.+..+-+.+|
T Consensus 66 pG~vd~---~~g~v~~-~~--~~~~w~~~~l~~~l~~~~---~~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~G 133 (302)
T 3vov_A 66 PGPLDF---RRGVIRF-AP--NIPGVQDFPIRRILEEAT---GRP---VFLENDANAAALAEHHLGAAQGEESSLYLTVS 133 (302)
T ss_dssp SSCEET---TTTEEC------CCTTCTTCCHHHHHHHHH---SSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEES
T ss_pred cccEeC---CCCEEEc-CC--CCCCcCCCChHHHHHHhh---CCC---EEEEechHHHHHHHHHhCCCCCCCCEEEEEEC
Confidence 444543 3455442 21 122334678888888766 444 5789999998777654 345778999999
Q ss_pred cCeeeeeecc
Q 015705 253 TGTNAAYVER 262 (402)
Q Consensus 253 TGtNacY~E~ 262 (402)
||.-++++.+
T Consensus 134 tGiG~gii~~ 143 (302)
T 3vov_A 134 TGIGGGVVLG 143 (302)
T ss_dssp SSEEEEEEET
T ss_pred CceeEEEEEC
Confidence 9999999875
No 25
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=98.01 E-value=7.3e-05 Score=71.91 Aligned_cols=134 Identities=18% Similarity=0.252 Sum_probs=84.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfT 175 (402)
.+|++|+|||++|++++++.|+ +.... .++.|. .+.+++++.+.+ ++.+.. +..-+|+.
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~~~~----~~~~~~~~~i~~----~~~~~~--------~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPHGE---IILTK--SAEISG----SDGDQILAEMKV----FLAENT--------DVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECST----TCHHHHHHHHHH----HHHTCT--------TCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCCCC---EEEEE--EecCCC----CCHHHHHHHHHH----HHhhcC--------CeeEEEEe
Confidence 5899999999999999988664 33322 344442 233556555544 444321 12234444
Q ss_pred eeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc----cCCCceEEEEe
Q 015705 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAVIL 251 (402)
Q Consensus 176 FSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay----~~~~~~iGlIl 251 (402)
..=|++. ++|++..-. . .++..+.++.+.|++.+ ++| +.|.||.-+..++-.+ .+.+..+.+.+
T Consensus 64 ~pG~vd~---~~g~v~~~~-~--l~~w~~~~l~~~l~~~~---~~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~ 131 (297)
T 4htl_A 64 APGYVNP---KTGLITMGG-A--IRRFDNFNLKEWLEAET---GLP---VAIENDANCALLAEKWLGKGQDLDDFLCLTI 131 (297)
T ss_dssp ESSEECT---TTCEEEECT-T--CGGGTTEEHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEE
T ss_pred cCcceeC---CCCEEEeCC-C--CCCccCCCHHHHHHHHH---CcC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 4444543 356654321 1 12223567888887765 455 6899999988777654 35577899999
Q ss_pred ecCeeeeeecc
Q 015705 252 GTGTNAAYVER 262 (402)
Q Consensus 252 GTGtNacY~E~ 262 (402)
|||.-++++..
T Consensus 132 GtGiG~giv~~ 142 (297)
T 4htl_A 132 GTGIGGGIFSN 142 (297)
T ss_dssp SSSEEEEEEET
T ss_pred CcceEEEEEEC
Confidence 99999999875
No 26
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.95 E-value=9.3e-05 Score=71.76 Aligned_cols=133 Identities=14% Similarity=0.197 Sum_probs=86.3
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfT 175 (402)
-||++|+|||++|++++++.|+ +.... .++.| +.+++++.|++ ++++. +..-+|+.
T Consensus 4 ~~lgiDiGgt~i~~~l~d~~G~---il~~~--~~~t~------~~~~~l~~i~~----~~~~~---------~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGREDGT---IIDRI--EFPTX------MPDETIEXVIQ----YFSQF---------SLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEE--EEECC------CHHHHHHHHHH----HHTTS---------CCSEEEEE
T ss_pred EEEEEEECcceeEEEEEECCCc---EEEEE--EecCC------ChHHHHHHHHH----HhccC---------CceEEEEE
Confidence 4799999999999999988653 33322 33333 24556555544 44321 12345555
Q ss_pred eeeeeeecc--CCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc----cCCCceEEE
Q 015705 176 FSFPVRQTS--IASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY----HNKDAIAAV 249 (402)
Q Consensus 176 FSFP~~Q~~--i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay----~~~~~~iGl 249 (402)
..=|++... ...|.+..-. ..+..+.++.+.|++.+ ++| +.|.||.-+..++-.+ .+.+..+.+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~----~~~w~~~~l~~~l~~~~---~~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l 129 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATP----XAGWRHYPFLQTVXNEM---XIP---VGFSTDVNAAALGEFLFGEAXGLDSCLYI 129 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCS----STTTBTCCHHHHHHHHH---CSC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEE
T ss_pred eceeeccccccccccEEecCC----CCCccCCChHHHHHHHh---CCC---EEEechhHHHHHHHHHhCCCCCCCcEEEE
Confidence 555676532 1125554322 12345678888888776 454 6899999988877654 355788999
Q ss_pred EeecCeeeeeecc
Q 015705 250 ILGTGTNAAYVER 262 (402)
Q Consensus 250 IlGTGtNacY~E~ 262 (402)
.+|||.-++++.+
T Consensus 130 ~~GtGiG~gii~~ 142 (302)
T 3epq_A 130 TIGTGIGAGAIVE 142 (302)
T ss_dssp EESSSEEEEEEET
T ss_pred EECCceEEEEEEC
Confidence 9999999999876
No 27
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=97.87 E-value=7.5e-05 Score=74.00 Aligned_cols=188 Identities=18% Similarity=0.165 Sum_probs=106.4
Q ss_pred ccEEEEEeCCceeEEEEEEE----cCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCcee
Q 015705 95 GLFYALDLGGTNFRVLRVQL----GGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR 170 (402)
Q Consensus 95 G~fLAlDlGGTNlRV~~V~L----~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l 170 (402)
+.+|++|+|||++|++++++ .| .+.... . ..|. .+.+++++.|++.+.++...... +
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g---~il~~~--~-~~~~----~~~~~~~~~i~~~i~~~~~~~~~-------~-- 89 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSV---HACVTR--Y-SMKR----KDITEIIEFFNEIIELMPASVMK-------R-- 89 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCE---EEEEEE--E-ECTT----CBGGGHHHHHHHHHHHSCHHHHT-------T--
T ss_pred CeEEEEEEccccEEEEEEecccCCCc---cEEEEe--e-ecCC----CCHHHHHHHHHHHHHHHhhcccc-------c--
Confidence 46899999999999999998 43 222222 1 1232 24678888888877765433210 1
Q ss_pred eeeeeeeee--eeeccCCceEEEecccceecCCCCCC-cHHHHHHHHHHHcCCCceEEEEEechhHhhhc----------
Q 015705 171 ELGFTFSFP--VRQTSIASGDLIKWTKGFSIEDTVGE-DVVGELTKAMERIGLDMRVAALVNDTIGTLAG---------- 237 (402)
Q Consensus 171 pLGfTFSFP--~~Q~~i~~g~Li~wtKgF~~~~v~G~-Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla---------- 237 (402)
.+|..++.| ++. |++. .. ..+..+. ++.+++++. +++..+.|.||..+..++
T Consensus 90 i~gigi~~pG~vd~-----g~v~-~~----~~~~~~~~~l~~~l~~~-----~~~~pv~v~NDa~aaalge~~l~~~~~~ 154 (373)
T 2q2r_A 90 VKAGVINVPGPVTG-----GAVG-GP----FNNLKGIARLSDYPKAL-----FPPGHSAILNDLEAGGFGVLAVSDAHVF 154 (373)
T ss_dssp EEEEEEEESSCEET-----TTEE-CC----CSSSBSCEEGGGSCTTT-----SCTTSEEEEEHHHHHHHHHHHHHHTTCH
T ss_pred ccEEEEEeeccccC-----CEEe-cc----CCCCCCcCCHHHHHHHh-----cCCCCEEEEccHhHHhccccccChhhhc
Confidence 345555555 443 3332 10 1111122 443333221 334346899999998888
Q ss_pred -----ccc----------------cCCCceEEEEeecCeeeeeecccCCCCccCCCCCCCCcEEEEeccCCcCCCCCCCC
Q 015705 238 -----GRY----------------HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLT 296 (402)
Q Consensus 238 -----~ay----------------~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~miINtEwG~Fg~~~lp~T 296 (402)
-.+ .+.+..+.+++|||..++++.+-.- -.+....-.|||..--+ +..
T Consensus 155 ~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~g~l---------~~G~~~~aGE~Gh~~~~--~~~ 223 (373)
T 2q2r_A 155 SEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYYNPP---------MNQHIVVPLELGSQTLP--MRK 223 (373)
T ss_dssp HHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEECC------------CEEEEEECGGGSBCC--CSS
T ss_pred cccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEecCcc---------cCCCcccccccceeecC--CCC
Confidence 222 2346789999999999999876321 12345666788865211 111
Q ss_pred --ccchhhcccCCCCCcceeeeeccccchhHHHHH
Q 015705 297 --EYDEALDTESLNPGEQIFEKIISGMYLGEIVRR 329 (402)
Q Consensus 297 --~~D~~lD~~S~nPG~q~fEKmiSG~YLGEivRl 329 (402)
.....+-.... +.-.+|..+||..|-++.+.
T Consensus 224 ~c~cg~~l~~~~~--~~g~lE~~~S~~~l~~~~~~ 256 (373)
T 2q2r_A 224 DIDYIQTLHAELK--LFPNYENMVSGAGLEFHYRQ 256 (373)
T ss_dssp CHHHHHHHHHHHT--SCCBHHHHSSHHHHHHHHHH
T ss_pred CcchhHHHHHHhh--ccccHhHhcCHHHHHHHHHH
Confidence 11111111100 24678999999888766554
No 28
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.83 E-value=0.00031 Score=67.48 Aligned_cols=124 Identities=17% Similarity=0.151 Sum_probs=77.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCcee-eeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQR-ELGF 174 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~l-pLGf 174 (402)
.+|++|+|||+.|++++++.|+ +.... ... |... ..+.+++++.+++.|.+++++.+... ..+ +.|.
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~---il~~~--~~~-~~~~-~~~~~~~~~~l~~~i~~~l~~~~~~~-----~~i~~~~i 79 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGT---PLAMA--EGG-ASAL-SQGIAKSWQAVLSTLEAAFQQAGLPA-----APASACAI 79 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCC---EEEEE--EES-CCCG-GGCHHHHHHHHHHHHHHHHHHTTCCC-----CCGGGEEE
T ss_pred EEEEEEcCccceEEEEEcCCCC---EEEEE--eCC-CCCc-ccCHHHHHHHHHHHHHHHHHhcCCCh-----hhhccceE
Confidence 4899999999999999988653 22222 111 1111 13468899999999999998755321 223 2455
Q ss_pred eeeee--eeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCC-ceEEEEEechhHhhhcccccCCCceEEEEe
Q 015705 175 TFSFP--VRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLD-MRVAALVNDTIGTLAGGRYHNKDAIAAVIL 251 (402)
Q Consensus 175 TFSFP--~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~-v~vvAIvNDTVaTLla~ay~~~~~~iGlIl 251 (402)
.++.| ++... |. + |.++ ++ -..+.|.||..+..++. +. .+..+.+++
T Consensus 80 gig~pG~v~~~~--------~~-----------~--------l~~~-~~~~~pv~v~NDa~aaa~ge-~~-~~~~v~v~~ 129 (305)
T 1zc6_A 80 GLGLSGVHNRQW--------AG-----------E--------FESQ-APGFARLSLATDGYTTLLGA-HG-GQPGIIVAL 129 (305)
T ss_dssp EEEESCCCTTSH--------HH-----------H--------HHHT-CCCCSEEEEECHHHHHHHHH-TT-TSSEEEEEE
T ss_pred EEEecCCCchHH--------HH-----------H--------HHHh-CCCCceEEEECCHHHHHHhh-cC-CCCeEEEEe
Confidence 55555 33211 31 0 2222 32 23578999999988775 33 356788999
Q ss_pred ecCeeeeeec
Q 015705 252 GTGTNAAYVE 261 (402)
Q Consensus 252 GTGtNacY~E 261 (402)
|||..++.+.
T Consensus 130 GTGigg~~i~ 139 (305)
T 1zc6_A 130 GTGSIGEALY 139 (305)
T ss_dssp SSSEEEEEEC
T ss_pred cCCeEEEEEe
Confidence 9999655443
No 29
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.80 E-value=0.00012 Score=69.52 Aligned_cols=131 Identities=18% Similarity=0.275 Sum_probs=79.8
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfT 175 (402)
.+|++|+|||++|++++++.|+ +... ..++.| .+.+++.+.|.+.+ ++ . +..-+|+.
T Consensus 5 ~~lgidiggt~i~~~l~d~~g~---il~~--~~~~~~-----~~~~~~~~~i~~~i----~~-~--------~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPDGK---ILDK--TSISTP-----ENLEDLLAWLDQRL----SE-Q--------DYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTTCC---EEEE--EEECCC-----SSHHHHHHHHHHHH----TT-S--------CCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCCCC---EEEE--EEEeCC-----CCHHHHHHHHHHHH----Hh-C--------CCcEEEEE
Confidence 3899999999999999988653 2322 234444 23566666555544 33 1 11234444
Q ss_pred eeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccc--cCCCceEEEEeec
Q 015705 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRY--HNKDAIAAVILGT 253 (402)
Q Consensus 176 FSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay--~~~~~~iGlIlGT 253 (402)
..=|++. ++|++.. +..+. .-.+.++.+.| +.+ ++| +.|.||..+..++-.+ .+.+..+-+++||
T Consensus 62 ~pG~vd~---~~g~v~~-~~~~~--~~~~~~l~~~l-~~~---~~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~Gt 128 (292)
T 2gup_A 62 VPGAVNQ---ETGVIDG-FSAVP--YIHGFSWYEAL-SSY---QLP---VHLENDANCVGLSELLAHPELENAACVVIGT 128 (292)
T ss_dssp ESSEECT---TTCBEES-CCSSG--GGSSSBHHHHT-GGG---CCC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEESS
T ss_pred ecCcccC---CCCEEEe-cCCCC--cccCCCHHHHH-HHc---CCC---EEEechHHHHHHHHHHhcCCCCeEEEEEECC
Confidence 4444543 2354442 11111 11245666666 433 444 5789999998888643 3456789999999
Q ss_pred Ceeeeeecc
Q 015705 254 GTNAAYVER 262 (402)
Q Consensus 254 GtNacY~E~ 262 (402)
|..++.+..
T Consensus 129 GiG~giv~~ 137 (292)
T 2gup_A 129 GIGGAMIIN 137 (292)
T ss_dssp SEEEEEEET
T ss_pred ceEEEEEEC
Confidence 999999865
No 30
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.56 E-value=0.00017 Score=68.75 Aligned_cols=116 Identities=14% Similarity=0.100 Sum_probs=73.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFT 175 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfT 175 (402)
.+|++|+|||+.|++++++.|+ +.... .++.|. ....+.+++++.|++.+.+++.+. +.|..
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~---i~~~~--~~~~~~-~~~~~~~~~~~~i~~~i~~~~~~~------------~~~ig 64 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGN---FIGEG--SSGPGN-YHNVGLTRAIENIKEAVKIAAKGE------------ADVVG 64 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSC---EEEEE--EESCCC-HHHHCHHHHHHHHHHHHHHHHTSC------------CSEEE
T ss_pred EEEEEEeCCCcEEEEEEcCCCC---EEEEE--eCCCCC-cccCCHHHHHHHHHHHHHHHHhcC------------CCEEE
Confidence 3799999999999999988653 23222 333332 111246889999999998886532 13444
Q ss_pred eeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCCCceEEEEeecCe
Q 015705 176 FSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGT 255 (402)
Q Consensus 176 FSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGt 255 (402)
++.|=-. .+++. ..|.+.+++ +++ .+.+.||+.+..++... .+..+-+++|||.
T Consensus 65 i~~~G~~--~~~~~-------------------~~l~~~l~~--~~~-pv~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 65 MGVAGLD--SKFDW-------------------ENFTPLASL--IAP-KVIIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp EEETTCC--SHHHH-------------------HHHHHHHTT--SSS-EEEEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred EEcCCCC--chhHH-------------------HHHHHHHHh--CCC-CEEEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 4444221 01111 234455544 443 46889999999988654 4567899999995
No 31
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=97.44 E-value=0.0014 Score=63.84 Aligned_cols=184 Identities=17% Similarity=0.179 Sum_probs=97.5
Q ss_pred cccEEEEEeCCceeEEEEEEEc-CCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeee
Q 015705 94 KGLFYALDLGGTNFRVLRVQLG-GREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (402)
Q Consensus 94 ~G~fLAlDlGGTNlRV~~V~L~-g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpL 172 (402)
.+.+|++|+|||++|++++++. +. +... ..++ .. ..+.+ .+.|.+++++.+. + ..
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~---i~~~--~~~~--~~----~~~~~----~~~i~~~~~~~~~-------~--i~ 68 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGE---ISQA--KTYS--GL----DYPSL----EAVIRVYLEEHKV-------E--VK 68 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCC---EEEE--EEEE--GG----GCSCH----HHHHHHHHHHSCC-------C--CC
T ss_pred CCEEEEEEechhheEEEEEECCCCc---EEEE--EEec--CC----CcCCH----HHHHHHHHHhcCC-------C--cc
Confidence 4568999999999999999873 42 2221 1222 21 11233 3445556654431 1 34
Q ss_pred eeeeeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhccccc-----------
Q 015705 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH----------- 241 (402)
Q Consensus 173 GfTFSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~----------- 241 (402)
|..++.|=-- +.+.+ . .-.+.. . .+ .+.|++.+ +++ .+.|.||..+..++-.+.
T Consensus 69 gigi~~pG~v---d~~~~-~-~~nl~w---~-~~-~~~l~~~~---~~p--~V~v~NDanaaalgE~~~~~~~~~~~g~g 133 (332)
T 1sz2_A 69 DGCIAIACPI---TGDWV-A-MTNHTW---A-FS-IAEMKKNL---GFS--HLEIINDFTAVSMAIPMLKKEHLIQFGGA 133 (332)
T ss_dssp EEEEEESSCC---CSSEE-C-CSSSCC---C-EE-HHHHHHHH---TCS--EEEEEEHHHHHHHHGGGCCGGGEEECSSC
T ss_pred EEEEEEeCce---eCCEE-e-eeCCCC---c-CC-HHHHHHHh---CCC--cEEEEeCHhHHhccccccChhhheecCCC
Confidence 5666665321 12333 1 111111 1 23 34555443 443 368999999988887642
Q ss_pred ---CCCceEEEEeecCeeeeeecccCCCCccCCCCCCCCcEEEEeccCCcCCCCCCCCccchhh-cccCCCCCcceeeee
Q 015705 242 ---NKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDEAL-DTESLNPGEQIFEKI 317 (402)
Q Consensus 242 ---~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~miINtEwG~Fg~~~lp~T~~D~~l-D~~S~nPG~q~fEKm 317 (402)
+.+..+.+.+|||.-++.+.+-. .+.--.-.|+|... ..|....+..+ ..-..+-|.-.+|.+
T Consensus 134 ~~~~~~~~~~v~~GTGiG~giv~~g~-----------~G~~g~agE~GH~~--v~~~~~~~~~l~~~~c~~~g~gclE~~ 200 (332)
T 1sz2_A 134 EPVEGKPIAVYGAGTGLGVAHLVHVD-----------KRWVSLPGEGGHVD--FAPNSEEEAIILEILRAEIGHVSAERV 200 (332)
T ss_dssp CCCTTCCEEEEEESSSEEEEEEEEET-----------TEEEEEECCGGGSB--CCCCSHHHHHHHHHHHHHSSSCBGGGT
T ss_pred CCCCCCcEEEEEcCccceEEEEecCC-----------CCeeeCCCCccccC--cCCCChHHHHHHHHHHhccCCcchhhh
Confidence 33667899999999999987632 12234455666431 11111100000 000001234578888
Q ss_pred ccccchhHHHHH
Q 015705 318 ISGMYLGEIVRR 329 (402)
Q Consensus 318 iSG~YLGEivRl 329 (402)
+||.-|-...|.
T Consensus 201 ~S~~~l~~~~~~ 212 (332)
T 1sz2_A 201 LSGPGLVNLYRA 212 (332)
T ss_dssp SSHHHHHHHHHH
T ss_pred ccHHHHHHHHHH
Confidence 888777665553
No 32
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.85 E-value=0.0017 Score=64.84 Aligned_cols=145 Identities=14% Similarity=0.178 Sum_probs=78.1
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHH---HHHHHHHHHhcCCCCCCCCCceeee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYI---AAALAKFVATEGEGFHVSPGRQREL 172 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~I---A~~I~~fl~~~~~~~~~~~~~~lpL 172 (402)
.+|+||+|||++|++++++. .+.... .++.+..-. .+.+++.+.+ ++.|.+++++.+.. ..-..
T Consensus 3 ~vlgidiGgt~ik~al~d~~----~il~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~~~~------~~~i~ 69 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE----RMVKMQ--NFSHSPDEL-GRFQKILDQLEFREKIARQFVEETGYS------LSSFS 69 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT----EEEEEE--EEECCHHHH-HTCSSGGGGHHHHHHHHHHHHHTTTCC------GGGCS
T ss_pred eEEEEECCccceeEEEEecc----hheeee--ecccCcccc-cchhhHHHHHHHHHHHHHHHHHHcCCC------ccCce
Confidence 47999999999999999852 233322 333332100 0223445555 78888888765432 11246
Q ss_pred eeeeeeeeeeccCCceEEEe-----------cccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechh---------
Q 015705 173 GFTFSFPVRQTSIASGDLIK-----------WTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTI--------- 232 (402)
Q Consensus 173 GfTFSFP~~Q~~i~~g~Li~-----------wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTV--------- 232 (402)
|+ .+.|=--.. .+|.+.. +.+ +..+.-.+-++.+.|++.+ ++|+ .|.||..
T Consensus 70 gI-i~~pG~vd~-~~G~~~~i~~~~~~~l~~~~~-~~~~~nl~~~l~~~l~~~~---~~Pv---~v~NDan~~~~~~~a~ 140 (381)
T 1saz_A 70 AF-VSRGGLLDP-IPGGVYLVDGLMIKTLKSGKN-GEHASNLGAIIAHRFSSET---GVPA---YVVDPVVVDEMEDVAR 140 (381)
T ss_dssp EE-EEECCSCSC-BCSSEEECCHHHHHHHHHTTT-CCCTTHHHHHHHHHHHHHH---CCCE---EEESCTTBCCCCGGGT
T ss_pred EE-EecCCCCCC-CCCceEecCHHHHHHHHhccc-ccChhhhhHHHHHHHHHhc---CCCE---EEeCCCccccCcHHHH
Confidence 77 777632211 1233310 111 0111111223333333333 6654 5999996
Q ss_pred Hhhh-----------------cc-c-c---cCCC--ceEEEEeecCeeeeeecc
Q 015705 233 GTLA-----------------GG-R-Y---HNKD--AIAAVILGTGTNAAYVER 262 (402)
Q Consensus 233 aTLl-----------------a~-a-y---~~~~--~~iGlIlGTGtNacY~E~ 262 (402)
+.-+ +- . + .+.+ ..+.+.+|||.-+|.+.+
T Consensus 141 aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~g~i~~ 194 (381)
T 1saz_A 141 VSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISIAAHRK 194 (381)
T ss_dssp BCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEEEEEET
T ss_pred HcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEEEEEEC
Confidence 4333 22 1 1 2234 789999999999999876
No 33
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.73 E-value=0.011 Score=55.28 Aligned_cols=127 Identities=20% Similarity=0.252 Sum_probs=71.3
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeee
Q 015705 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQREL 172 (402)
Q Consensus 93 E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpL 172 (402)
+.+.+|++|+|||++|+ +...++ + . .+.+.|. ..+.+++.+.|++ ++++.. ..-+
T Consensus 4 ~~~~~lgiDIGGT~i~~--~d~~g~---~-~---~~~~t~~---~~~~~~~~~~i~~----~i~~~~---------i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVKI--GLSTDG---E-E---RKVESGK---TMTGPEMVAAVTA----MAKDMT---------YDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEEE--EETTTC---C-E---EEEECCT---TCCHHHHHHHHHH----HTTTCC---------CSEE
T ss_pred cCCEEEEEEECCCEEEE--EECCCC---E-E---EEEECCC---CCCHHHHHHHHHH----HHHhCC---------CCEE
Confidence 34579999999999994 444332 2 1 1233332 2345566665554 443221 1234
Q ss_pred eeeeeeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCCCceEEEEee
Q 015705 173 GFTFSFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVILG 252 (402)
Q Consensus 173 GfTFSFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlG 252 (402)
|+.+.=|++. ++. +..+-.+. ++-.+.++. + +.++| +.+.||.-+.-++-.+. ...+.+.+|
T Consensus 59 gi~~pG~Vd~----~~~-~~~~~nl~-~~w~~~~l~----~---~~~~p---v~v~NDanaaalge~~~--~~~~~l~~G 120 (226)
T 3lm2_A 59 AMGYPGPVVH----NKP-LREPVNLG-EGWVGYDYE----G---AFGRP---VRIVNDALMQAIGSYNG--GRMLFLGLG 120 (226)
T ss_dssp EEEESSCEET----TEE-CSCCTTSC-SCCTTCCHH----H---HHTSC---EEEEEHHHHHHHHHCCS--SEEEEEEES
T ss_pred EEEEEeEEEC----CeE-EEECCcCC-ccccCCchH----H---hcCCe---EEEEEHHHHHHHHHhhc--CcEEEEEeC
Confidence 4444444553 232 22221110 122244543 2 23554 57899999888876554 578999999
Q ss_pred cCeeeeeecc
Q 015705 253 TGTNAAYVER 262 (402)
Q Consensus 253 TGtNacY~E~ 262 (402)
||.-++.+..
T Consensus 121 tGiG~gii~~ 130 (226)
T 3lm2_A 121 TGLGAAMIVE 130 (226)
T ss_dssp SSEEEEEEET
T ss_pred CceEEEEEEC
Confidence 9999998864
No 34
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.92 E-value=0.055 Score=55.92 Aligned_cols=65 Identities=20% Similarity=0.277 Sum_probs=45.2
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeec--cCc-cccccCchHHHHHHHHHHHHHHHhcCC
Q 015705 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEGE 160 (402)
Q Consensus 93 E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~t~~~LFd~IA~~I~~fl~~~~~ 160 (402)
|..-+|+||+|+|+.|+++++..|+ ++...+..++ .|+ .....+.+++++.+.+++.+.+++.+.
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~ 68 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADI 68 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEEEEcCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCC
Confidence 3456899999999999999976543 3333333332 122 123346889999999999999987543
No 35
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.79 E-value=0.066 Score=55.30 Aligned_cols=63 Identities=24% Similarity=0.296 Sum_probs=43.9
Q ss_pred cccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Cc-cccccCchHHHHHHHHHHHHHHHhcC
Q 015705 94 KGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 94 ~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
..-+|+||+|+|+.|+++++..| .++...+..++. |+ .....+.+++++.+.+++.+.+++.+
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~G---~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 71 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLPD---TVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAG 71 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETTT---EEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEecCcceEEEEECCCC---CEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcC
Confidence 34689999999999999998544 234333333332 21 12344688999999999999987654
No 36
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.50 E-value=0.1 Score=53.77 Aligned_cols=62 Identities=18% Similarity=0.325 Sum_probs=44.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeec--cCc-cccccCchHHHHHHHHHHHHHHHhcCC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEGE 160 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~t~~~LFd~IA~~I~~fl~~~~~ 160 (402)
.+|+||+|+|+.|+++++..|+ ++...+..++ .|+ .....+.+++++.+.++|.+.+++.+.
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~ 70 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRNGK---KIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGI 70 (506)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEcCCCceEEEEECCCCC---EEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCC
Confidence 5899999999999999987553 3333333332 122 223446889999999999999987653
No 37
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.42 E-value=0.099 Score=54.18 Aligned_cols=61 Identities=15% Similarity=0.297 Sum_probs=43.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeec--cCc-cccccCchHHHHHHHHHHHHHHHhcC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
.+|+||+|+|+.|+++++..|+ ++...+..++ .|+ .....+.+++++.+.++|.+.+++.+
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 90 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQK---IAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSG 90 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEEeCCcceEEEEECCCCC---EEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999987553 3333333333 222 22344688999999999999998754
No 38
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.39 E-value=0.13 Score=52.71 Aligned_cols=61 Identities=25% Similarity=0.319 Sum_probs=42.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeec--cCc-cccccCchHHHHHHHHHHHHHHHhcC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVS--IPP-HLMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~--Ip~-~~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
.+|+||+|||+.|+++++..|+ ++...+..++ .|+ .....+.+++++.+.++|.+.+++.+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGR---PVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAG 66 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSC---EEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeeCCcceEEEEECCCCC---EEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcC
Confidence 4799999999999999976543 3333333332 122 12234678999999999999988754
No 39
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.19 E-value=0.13 Score=52.79 Aligned_cols=61 Identities=15% Similarity=0.297 Sum_probs=43.5
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Cc-cccccCchHHHHHHHHHHHHHHHhcC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
-+|+||+|+|+.|+++++..|+ ++...+..++. |+ .....+.+++++.+.++|.+.+++.+
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 70 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGE---IAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINEND 70 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEEEEeCccceEEEEEcCCCC---EEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 5899999999999999987553 33333333331 22 12344678999999999999998754
No 40
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=94.06 E-value=0.13 Score=52.53 Aligned_cols=59 Identities=17% Similarity=0.350 Sum_probs=41.1
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Ccc-ccccCchHHHHHHHHHHHHHHHhc
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATE 158 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~~-~~~~t~~~LFd~IA~~I~~fl~~~ 158 (402)
||+||+|||+.|+++++..|+ ++...+..+++ |+. ....+.+++++.+.++|.+.+++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~---~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~ 63 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGE---VVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH 63 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEecCcccEEEEECCCCC---EEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC
Confidence 799999999999999976442 33333333321 221 223467899999999999998764
No 41
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.03 E-value=0.1 Score=53.84 Aligned_cols=59 Identities=10% Similarity=0.139 Sum_probs=41.9
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Cc-cccccCchHHHHHHHHHHHHHHHhc
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATE 158 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~t~~~LFd~IA~~I~~fl~~~ 158 (402)
.+|+||+|+|+.|+++++..|+ ++...+..+++ |+ .....+.+++++.+.+++.+.+ +.
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~ 67 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGG---LHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QS 67 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TT
T ss_pred EEEEEEeCCCceEEEEECCCCC---EEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hc
Confidence 5899999999999999977543 33333333332 22 2234468899999999999998 44
No 42
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=93.98 E-value=0.17 Score=52.06 Aligned_cols=60 Identities=7% Similarity=0.006 Sum_probs=42.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Ccc-ccccCchHHHHHHHHHHHHHHHhc
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATE 158 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~~-~~~~t~~~LFd~IA~~I~~fl~~~ 158 (402)
.+|+||+|||+.|+++++..|+ ++...+..++. |+. ....+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~---i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~ 67 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELN---IVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVL 67 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCcceEEEEECCCCC---EEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHh
Confidence 4799999999999999987543 33333333331 221 223367899999999999998864
No 43
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=93.88 E-value=0.1 Score=54.31 Aligned_cols=62 Identities=24% Similarity=0.398 Sum_probs=43.9
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--C-ccccccCchHHHHHHHHHHHHHHHhcCC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--P-PHLMTGSSHELFDYIAAALAKFVATEGE 160 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p-~~~~~~t~~~LFd~IA~~I~~fl~~~~~ 160 (402)
-+|+||+|+|+.|+++++..|+ ++...+..+++ | ......+.+++++.+.++|.+.+++.+.
T Consensus 6 ~~lgIDiGtts~ka~l~d~~G~---il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~ 70 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQGR---MVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADI 70 (554)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEECcccEEEEEECCCCC---EEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCC
Confidence 5899999999999999986543 33333333321 2 1233456889999999999999987553
No 44
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=93.71 E-value=0.14 Score=52.52 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=42.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Cc-cccccCchHHHHHHHHHHHHHHHhcC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
.+|+||+|||+.|+++++..|+ ++...+..++. |+ .....+.+++++.+.++|.+.+++.+
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~---~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~ 67 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESN---IHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSAR 67 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCchhEEEEECCCCC---EEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 4899999999999999976442 33333333321 22 12233678999999999999988754
No 45
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=93.70 E-value=0.16 Score=52.44 Aligned_cols=60 Identities=12% Similarity=0.203 Sum_probs=43.0
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Cc-cccccCchHHHHHHHHHHHHHHHhc
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATE 158 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~t~~~LFd~IA~~I~~fl~~~ 158 (402)
.||+||+|+|+.|+++++..|+ ++...+..++. |+ .....+.+++++.+.++|.+.+++.
T Consensus 5 ~~lgIDiGtts~K~~l~d~~G~---il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~ 67 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDINGK---AVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKI 67 (504)
T ss_dssp EEEEEEECSSEEEEEEEETTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEecCCceEEEEEcCCCC---EEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999986543 34433334432 22 2234468899999999999998764
No 46
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.57 E-value=0.15 Score=52.45 Aligned_cols=61 Identities=13% Similarity=0.225 Sum_probs=42.6
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Ccc-ccccCchHHHHHHHHHHHHHHHhcC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PPH-LMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~~-~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
.+|+||+|+|+.|+++++..|+ ++......++. |+. ....+.+++++.+.++|.+.+++.+
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~---i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~ 66 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGE---IYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGN 66 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCcceEEEEECCCCC---EEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcC
Confidence 4799999999999999976553 33333333331 211 1233678999999999999988754
No 47
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.53 E-value=0.15 Score=52.77 Aligned_cols=65 Identities=20% Similarity=0.271 Sum_probs=45.4
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc--Cc-cccccCchHHHHHHHHHHHHHHHhcCC
Q 015705 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI--PP-HLMTGSSHELFDYIAAALAKFVATEGE 160 (402)
Q Consensus 93 E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I--p~-~~~~~t~~~LFd~IA~~I~~fl~~~~~ 160 (402)
|+--||+||+|.|+.|+++++..|+ ++...+..++. |+ .....+.+++++-+.++|.+.+++.+.
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~G~---~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~ 69 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHDAN---IISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADI 69 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTTCC---EEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTC
T ss_pred CceEEEEEEccccceeeeEEcCCCC---EEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCC
Confidence 5555789999999999999875443 33333334432 22 233446889999999999999988664
No 48
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=93.34 E-value=0.18 Score=52.75 Aligned_cols=61 Identities=11% Similarity=0.267 Sum_probs=42.9
Q ss_pred cEEEEEeCCceeEEEEEEE-cCCcceeEEEEeeeec-------cC-------ccccccCchHHHHHHHHHHHHHHHhcC
Q 015705 96 LFYALDLGGTNFRVLRVQL-GGREGRVVKQEFEEVS-------IP-------PHLMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L-~g~~~~~~~~~~~~~~-------Ip-------~~~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
-||+||+|+|+.|+++++. .|+ ++...+..|+ .| ......+.+++++-+.++|.+.+++.+
T Consensus 6 ~~lgIDiGTts~Ka~l~d~~~G~---i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~~~ 81 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDLSNGQ---ELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKESG 81 (572)
T ss_dssp EEEEEEECSSEEEEEEEETTTCC---EEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC--
T ss_pred EEEEEecCCcceEEEEEECCCCe---EEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999999987 553 4444433443 12 222344677999999999999998754
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=91.46 E-value=1.2 Score=45.34 Aligned_cols=79 Identities=19% Similarity=0.137 Sum_probs=47.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeee-c--cCc-cccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceee
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEV-S--IPP-HLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRE 171 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~-~--Ip~-~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lp 171 (402)
.||+||+|+|+.|+++++..|+...........+ + .|. .....+.+++++.+.+++.+...... +..-
T Consensus 5 ~~lgiDiGtts~k~~l~d~~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~~~--------~i~~ 76 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAAGI--------AIDS 76 (489)
T ss_dssp EEEEEEECSSEEEEEEEEEEGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHTTC--------CCCE
T ss_pred eEEEEEecCCCceEEEEEecCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhCCC--------CceE
Confidence 4899999999999999988654221111110000 0 111 11123567899999999988765211 2235
Q ss_pred eeeee----eeeeee
Q 015705 172 LGFTF----SFPVRQ 182 (402)
Q Consensus 172 LGfTF----SFP~~Q 182 (402)
+|++- --|++.
T Consensus 77 Igis~q~~~~v~~D~ 91 (489)
T 2uyt_A 77 IGIDTWGVDFVLLDQ 91 (489)
T ss_dssp EEEEECSSCEEEECT
T ss_pred EEEecCcccEEEECC
Confidence 67766 666666
No 50
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=90.14 E-value=0.36 Score=49.72 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=39.0
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeecc-C-ccccccCchHHHHHHHHHHHHHH
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSI-P-PHLMTGSSHELFDYIAAALAKFV 155 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~I-p-~~~~~~t~~~LFd~IA~~I~~fl 155 (402)
.||+||+|+|+.|+++++-.| .++...+..+++ | ......+.+++++.+.++|.+.+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G---~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~ 65 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG---RMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA 65 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS---CEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT
T ss_pred eEEEEEcCCCCeEEEEEECCC---cEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH
Confidence 489999999999999997433 244433333432 1 11233468899999999999886
No 51
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=90.01 E-value=0.75 Score=43.27 Aligned_cols=169 Identities=16% Similarity=0.210 Sum_probs=86.4
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeee
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTF 176 (402)
+|+||+|+||+++++++ ++ .... .++++-. ...+.+++..++.+.+.. .. ..+
T Consensus 5 ~L~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~-~~~t~de~~~~l~~l~~~----~~--------~~i------ 57 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITE--DG--KTFR----RWRLSTG-VFQTEDELFSHLHPLLGD----AM--------REI------ 57 (249)
T ss_dssp EEEEEECSSEEEEEEES--SS--SSCE----EEEEECC-TTCCHHHHHHHHHHHHGG----GG--------GGE------
T ss_pred EEEEEECCCeEEEEEEE--CC--EEEE----EEEecCC-CCCCHHHHHHHHHHHHhh----cc--------ccC------
Confidence 79999999999999985 22 1222 3444422 223567777666543322 10 001
Q ss_pred eeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHc-CCCceEEE-----E----Ee------chhHhhhcccc
Q 015705 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAA-----L----VN------DTIGTLAGGRY 240 (402)
Q Consensus 177 SFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~-~l~v~vvA-----I----vN------DTVaTLla~ay 240 (402)
++.-++.| +-.+...+++++++. +++..++. + =| |-.+..+++..
T Consensus 58 ------------------~~i~IsSV-vp~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~ 118 (249)
T 3bex_A 58 ------------------KGIGVASV-VPTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVK 118 (249)
T ss_dssp ------------------EEEEEEES-CHHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHH
T ss_pred ------------------CEEEEEcC-cHHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHH
Confidence 11223333 345666777777664 44322210 1 11 33334444333
Q ss_pred cCCCceEEEEeecCeeeeeecccCCCCccCCCCCCCCcEE---EEeccCCc--CCCCCCCCccchhhcccCCCCCcceee
Q 015705 241 HNKDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMV---INMEWGNF--RSSHLPLTEYDEALDTESLNPGEQIFE 315 (402)
Q Consensus 241 ~~~~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~mi---INtEwG~F--g~~~lp~T~~D~~lD~~S~nPG~q~fE 315 (402)
......+-+=+||.+..+++ .-. .+.+ -+| +++=.-++ +...||.-+.+ ......|+..-|
T Consensus 119 ~~~~~~iVvD~GTA~T~d~v-~~g---~~lG------G~I~PGi~l~~~aL~~~ta~Lp~v~~~----~~~~~~g~nT~~ 184 (249)
T 3bex_A 119 EYGKNGIIIDMGTATTVDLV-VNG---SYEG------GAILPGFFMMVHSLFRGTAKLPLVEVK----PADFVVGKDTEE 184 (249)
T ss_dssp HTCSCEEEEEESSEEEEEEE-ETT---EEEE------EEEEECHHHHHHHHHHTCSSCCCCCCC----CCCSSSBSSHHH
T ss_pred HcCCCEEEEEcCCceEEEEE-eCC---eEee------EEECccHHHHHHHHHHhhhcCCCCccc----CCCCCCCCCHHH
Confidence 33456677788999999998 421 1111 111 11111111 11236654332 234457889999
Q ss_pred eeccccchhH
Q 015705 316 KIISGMYLGE 325 (402)
Q Consensus 316 KmiSG~YLGE 325 (402)
-|-||.|.|-
T Consensus 185 ai~sGi~~g~ 194 (249)
T 3bex_A 185 NIRLGVVNGS 194 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999977654
No 52
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=86.61 E-value=1.4 Score=45.53 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=36.2
Q ss_pred cEEEEEeCCceeEEEEEE-EcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHH
Q 015705 96 LFYALDLGGTNFRVLRVQ-LGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAK 153 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~-L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~ 153 (402)
-+|+||+|+|+.|+++++ -.|+ ++...+.. .|. ....+.+++++.+.+++.+
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~G~---i~~~~~~~--~~g-~~e~d~~~~~~~i~~~l~~ 58 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAETGE---LVRFGQAK--HPN-GTSVDPSYWWSAFQEAAEQ 58 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTTCC---EEEEEEEE--CCS-SSEECTHHHHHHHHHHHHH
T ss_pred EEEEEEeccccEEEEEEECCCCe---EEEEEEEe--CCC-CceECHHHHHHHHHHHHHh
Confidence 589999999999999998 4442 33333333 343 2334678899988888765
No 53
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=81.28 E-value=1.9 Score=41.01 Aligned_cols=49 Identities=14% Similarity=0.214 Sum_probs=31.3
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcC
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~ 159 (402)
+|+||+|+||.++++++ ++ ... ..|++|-. ..+.+++ +..+.++++..+
T Consensus 4 lL~IDIGNT~iK~gl~d--~~--~l~----~~~r~~T~--~~t~de~----~~~l~~ll~~~~ 52 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD--GD--EIK----LRFRHTSK--VSTSDEL----GIFLKSVLRENN 52 (266)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEE----EEEEEECS--CCCHHHH----HHHHHHHHHTTT
T ss_pred EEEEEECCCeEEEEEEE--CC--EEE----EEEEecCC--CCCHHHH----HHHHHHHHHHcC
Confidence 79999999999999985 22 222 24566644 3345555 444556666544
No 54
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=81.28 E-value=14 Score=34.96 Aligned_cols=182 Identities=21% Similarity=0.326 Sum_probs=89.3
Q ss_pred EEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHHHhcCCCCCCCCCceeeeeeee
Q 015705 97 FYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFVATEGEGFHVSPGRQRELGFTF 176 (402)
Q Consensus 97 fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl~~~~~~~~~~~~~~lpLGfTF 176 (402)
+|+||.|.||+++++.+ ++ .... .|+++... ..+.+++..++. ++++..+... ..
T Consensus 2 lL~IDIGNT~ik~gl~~--~~--~l~~----~~r~~T~~-~~t~de~~~~l~----~ll~~~~~~~-----~~------- 56 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE--EG--ELRQ----HWRMETDR-HKTEDEYGMLVK----QLLEHEGLSF-----ED------- 56 (268)
T ss_dssp EEEEEECSSEEEEEEEE--TT--EEEE----EEEEECCT-TCCHHHHHHHHH----HHHHHTTCCG-----GG-------
T ss_pred EEEEEECcCcEEEEEEE--CC--EEEE----EEEecCCC-cCCHHHHHHHHH----HHHHHcCCCc-----cc-------
Confidence 69999999999999986 22 2222 34444221 234566666554 4544443211 00
Q ss_pred eeeeeeccCCceEEEecccceecCCCCCCcHHHHHHHHHHHc-CCCceEEEEEechhHhhhcccccCC------------
Q 015705 177 SFPVRQTSIASGDLIKWTKGFSIEDTVGEDVVGELTKAMERI-GLDMRVAALVNDTIGTLAGGRYHNK------------ 243 (402)
Q Consensus 177 SFP~~Q~~i~~g~Li~wtKgF~~~~v~G~Dv~~lL~~al~r~-~l~v~vvAIvNDTVaTLla~ay~~~------------ 243 (402)
+ ++ .-++.|+ -.+...|++++++. +++..+ ++-.+.+=+...|.+|
T Consensus 57 --------i-~~--------iiISSVv-p~~~~~l~~~~~~~~~~~~~~---v~~~~~~gl~~~y~~P~~lG~DR~~~~v 115 (268)
T 2h3g_X 57 --------V-KG--------IIVSSVV-PPIMFALERMCEKYFKIKPLV---VGPGIKTGLNIKYENPREVGADRIVNAV 115 (268)
T ss_dssp --------C-CE--------EEEEESC-HHHHHHHHHHHHHHTCCCCEE---CSTTCCCCCEECSSCGGGSCHHHHHHHH
T ss_pred --------C-cE--------EEEEccC-hhHHHHHHHHHHHHhCCCeEE---EcCCCCCCccccCCChhhcCHHHHHHHH
Confidence 1 12 2223333 46667778888775 444322 2333344444444432
Q ss_pred -------CceEEEEeecCeeeeeecccCCCCccCCCCCCCCcEE---EEeccCCcC--CCCCCCCccchhhcccCCCCCc
Q 015705 244 -------DAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMV---INMEWGNFR--SSHLPLTEYDEALDTESLNPGE 311 (402)
Q Consensus 244 -------~~~iGlIlGTGtNacY~E~~~~I~k~~~~~~~~~~mi---INtEwG~Fg--~~~lp~T~~D~~lD~~S~nPG~ 311 (402)
...|=+=+||=+..+++..-. .+.+ -+| +++=.-++. ...||.-+.+ ......|+
T Consensus 116 aA~~~~~~~~iVVD~GTAtT~d~v~~~g---~~lG------G~I~PGi~l~~~AL~~~Ta~Lp~v~~~----~p~~~~g~ 182 (268)
T 2h3g_X 116 AGIHLYGSPLIIVDFGTATTYCYINEEK---HYMG------GVITPGIMISAEALYSRAAKLPRIEIT----KPSSVVGK 182 (268)
T ss_dssp HHHHHHCSSEEEEEESSEEEEEEECTTS---EEEE------EEEEECHHHHHHHHHC-------CCCC----CCSCSSCS
T ss_pred HHHHhcCCCEEEEECCCceEEEEECCCC---cEEE------EEECccHHHHHHHHHHHHhcCCCcccc----CCCCCCCc
Confidence 344445566666666664321 1111 111 111111111 1225544322 23345789
Q ss_pred ceeeeeccccchhHH--HHHHHHHHHHc
Q 015705 312 QIFEKIISGMYLGEI--VRRVLCRMAEE 337 (402)
Q Consensus 312 q~fEKmiSG~YLGEi--vRlill~l~~~ 337 (402)
..-|-|-||.|.|-+ +..++.++.++
T Consensus 183 nT~~ai~sGi~~g~~g~i~~~i~~~~~e 210 (268)
T 2h3g_X 183 NTVSAMQSGILYGYVGQVEGIVKRMKEE 210 (268)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887753 34455555544
No 55
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=79.99 E-value=32 Score=31.19 Aligned_cols=29 Identities=10% Similarity=0.225 Sum_probs=21.3
Q ss_pred HHHHHHHHcCCCceEEEEEechhHhhhcccc
Q 015705 210 ELTKAMERIGLDMRVAALVNDTIGTLAGGRY 240 (402)
Q Consensus 210 lL~~al~r~~l~v~vvAIvNDTVaTLla~ay 240 (402)
.+++++++.| +++..++++..|.+.+...
T Consensus 110 ~~~~~~~~~g--~~~~~i~~e~~A~a~~~~~ 138 (272)
T 3h1q_A 110 ACGHVVAGAG--LELVTLVDEPVAAARALGI 138 (272)
T ss_dssp HHHHHHHHTT--CEEEEEECHHHHHHHHHTC
T ss_pred HHHHHHHHcC--CeeeecccHHHHHHHHHcC
Confidence 4666776666 4577899999999887544
No 56
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=72.96 E-value=17 Score=35.46 Aligned_cols=54 Identities=17% Similarity=0.137 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechhHhhhcccccC---CCceEEEE--eecCeeeeeecc
Q 015705 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHN---KDAIAAVI--LGTGTNAAYVER 262 (402)
Q Consensus 207 v~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~---~~~~iGlI--lGTGtNacY~E~ 262 (402)
-.+.+++|.++.|+ +++.++|+.+|..++..... .....-+| +|-||--..+..
T Consensus 165 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~ 223 (409)
T 4gni_A 165 QKAALIAAAAAADL--EVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLA 223 (409)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHHcCC--CeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEE
Confidence 34678888888876 67899999999988876543 12222223 566665544433
No 57
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=70.39 E-value=18 Score=35.06 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechhHhhhccccc
Q 015705 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYH 241 (402)
Q Consensus 207 v~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~ 241 (402)
-.+.+++|.++.|+ +++.++|+.+|..++....
T Consensus 173 ~r~~~~~a~~~AGl--~~~~li~Ep~AAa~~~~~~ 205 (404)
T 3i33_A 173 QRQATKDAGTITGL--NVLRIINEPTAAAIAYGLD 205 (404)
T ss_dssp HHHHHHHHHHHHTC--EEEEEEEHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHcCC--CeEEEeccHHHHHHHHHhh
Confidence 35677888777776 6789999999998876554
No 58
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=70.15 E-value=25 Score=32.32 Aligned_cols=36 Identities=6% Similarity=0.100 Sum_probs=25.0
Q ss_pred EEEechhHhhhcccccCCCceEEEEeecC-eeeeeec
Q 015705 226 ALVNDTIGTLAGGRYHNKDAIAAVILGTG-TNAAYVE 261 (402)
Q Consensus 226 AIvNDTVaTLla~ay~~~~~~iGlIlGTG-tNacY~E 261 (402)
-.||.-+|..++..+.++....-+.+|-| +...+++
T Consensus 75 ~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~ 111 (276)
T 4ehu_A 75 KQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLD 111 (276)
T ss_dssp EECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEEC
T ss_pred cccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEE
Confidence 46899999988888877766666666554 4455554
No 59
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=67.45 E-value=26 Score=33.62 Aligned_cols=51 Identities=20% Similarity=0.184 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCC-CceEEEE--eecCeeeee
Q 015705 207 VVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK-DAIAAVI--LGTGTNAAY 259 (402)
Q Consensus 207 v~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~-~~~iGlI--lGTGtNacY 259 (402)
-.+.+++|.++.|+ +++.++|+.+|..++...... ....-+| +|-||--..
T Consensus 168 ~r~~~~~a~~~aGl--~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvs 221 (394)
T 3qfu_A 168 QRQATKDAGTIAGL--NVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVS 221 (394)
T ss_dssp HHHHHHHHHHHTTC--EEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHcCC--ceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEE
Confidence 35667788777775 678999999999987644322 2222233 566665333
No 60
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=64.75 E-value=18 Score=37.16 Aligned_cols=40 Identities=33% Similarity=0.394 Sum_probs=28.0
Q ss_pred CC--CceEEEEEechhHhhhcccccCCCceEEEEeecCeeeeee
Q 015705 219 GL--DMRVAALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAYV 260 (402)
Q Consensus 219 ~l--~v~vvAIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY~ 260 (402)
|+ .+.|++-.=|+.+.+++.. .+ ...+-+++||++-....
T Consensus 269 Gl~~g~pV~~g~~D~~aa~~g~~-~~-~g~~~~s~GTs~~~~~~ 310 (538)
T 4bc3_A 269 GFPPGCKVVAFTGDNPASLAGMR-LE-EGDIAVSLGTSDTLFLW 310 (538)
T ss_dssp CCCTTCEEECCEEHHHHHHHHTT-CC-TTCEEEEESSSEEEEEE
T ss_pred CCCCCCeEEEecccHHhhhhccc-cC-CCcEEEEeccchheEEe
Confidence 55 3777888889988888875 33 34577888998655443
No 61
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=50.68 E-value=52 Score=31.41 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=24.7
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEechhHhhhccc
Q 015705 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGR 239 (402)
Q Consensus 206 Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~a 239 (402)
+.++-+.+++++.|+ ++..|+|..+|...+..
T Consensus 151 ~~v~~~~~~~~~aGl--~~~~i~~ep~Aaa~~~~ 182 (377)
T 2ych_A 151 EAVAGVLEALRGAGL--VPVVLDVKPFAGLYPLE 182 (377)
T ss_dssp HHHHHHHHHHHHTTC--EEEEEEEHHHHTTGGGH
T ss_pred HHHHHHHHHHHHCCC--ceEEEecchHHHHHHHH
Confidence 456778888888774 56789999999887753
No 62
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=50.25 E-value=58 Score=31.17 Aligned_cols=62 Identities=19% Similarity=0.256 Sum_probs=41.4
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCcccc-ccC-chHHHHHHHHHHHHHHHh
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TGS-SHELFDYIAAALAKFVAT 157 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~~t-~~~LFd~IA~~I~~fl~~ 157 (402)
.|-|||+|-.++|..++++.+..-..+....+..++-+.+- ++. .++=.+-..+++..|...
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 68 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVI 68 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHH
Confidence 47899999999999999997533333443444455555542 222 456677777888888654
No 63
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=50.00 E-value=1.4e+02 Score=30.17 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCCceEEEEEechhHhhhcccccCCCceEEEEe--ecCee
Q 015705 209 GELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNKDAIAAVIL--GTGTN 256 (402)
Q Consensus 209 ~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~~~~iGlIl--GTGtN 256 (402)
+.+.+|....|+ +++.++|..+|..++...........+|+ |-||-
T Consensus 126 ~a~~~a~~~AGl--~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~ 173 (509)
T 2v7y_A 126 QATKDAGRIAGL--EVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTF 173 (509)
T ss_dssp HHHHHHHHHTTC--EEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCE
T ss_pred HHHHHHHHHcCC--CeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeE
Confidence 566677766665 67899999999988765543333344554 44443
No 64
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=47.34 E-value=11 Score=35.37 Aligned_cols=34 Identities=6% Similarity=0.058 Sum_probs=24.1
Q ss_pred EEEechhHhhhcccccCCCceEEEEeecCeeeee
Q 015705 226 ALVNDTIGTLAGGRYHNKDAIAAVILGTGTNAAY 259 (402)
Q Consensus 226 AIvNDTVaTLla~ay~~~~~~iGlIlGTGtNacY 259 (402)
.++|+.++...+..|..|++..-+=+|.+..-+.
T Consensus 78 ~~v~Ei~ah~~ga~~~~~~~~~vidiGGqd~k~i 111 (270)
T 1hux_A 78 KQMSELSCHAMGASFIWPNVHTVIDIGGQDVKVI 111 (270)
T ss_dssp EEECHHHHHHHHHHHHCTTCCEEEEEETTEEEEE
T ss_pred CCcccHHHHHHHHHHhCCCCCEEEEECCCceEEE
Confidence 4589999998888888887766555666554443
No 65
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=45.85 E-value=15 Score=38.53 Aligned_cols=54 Identities=15% Similarity=0.113 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCceEEEEEechhHhhhcccccCC--CceE-EEEeecCeeeeeeccc
Q 015705 208 VGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK--DAIA-AVILGTGTNAAYVERA 263 (402)
Q Consensus 208 ~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~--~~~i-GlIlGTGtNacY~E~~ 263 (402)
.+.+++|....|+ +++.++|+.+|.-++...... ...+ =+=+|-||--..+...
T Consensus 151 r~a~~~Aa~~AGl--~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~ 207 (605)
T 4b9q_A 151 RQATKDAGRIAGL--EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEI 207 (605)
T ss_dssp HHHHHHHHHHTTC--EEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEE
T ss_pred HHHHHHHHHHcCC--ceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEE
Confidence 3445556555565 678899999999887544331 2222 2236777765554443
No 66
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=45.12 E-value=52 Score=33.77 Aligned_cols=76 Identities=20% Similarity=0.114 Sum_probs=45.2
Q ss_pred eeeccccCCCCCCccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCcccc-ccC-chHHHHHHHHHHHHHHHh
Q 015705 80 MLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TGS-SHELFDYIAAALAKFVAT 157 (402)
Q Consensus 80 MLPS~v~~lP~G~E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~~t-~~~LFd~IA~~I~~fl~~ 157 (402)
|-|.+.. |.-...-.|=|||+|-.++|..+++..++.........+...+-+.+- ++. .++=.+-..+++..|...
T Consensus 2 ~~~~~~~--~~~~~~~~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~ 79 (508)
T 3hi0_A 2 MTRSEAQ--GRLTGLAPVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVL 79 (508)
T ss_dssp --CCCCS--SSCTTCCCEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccc--cccccCCeEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 4455532 222233468899999999999999986543333433333455555542 221 456667777788887543
No 67
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=42.72 E-value=25 Score=33.94 Aligned_cols=51 Identities=22% Similarity=0.241 Sum_probs=32.6
Q ss_pred ccccEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHH
Q 015705 93 EKGLFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALA 152 (402)
Q Consensus 93 E~G~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~ 152 (402)
+.|.++.+|+||.++=++++++.+.. .+...+ .....| ++++-++|++.|.
T Consensus 188 ~~~~vlVvDIGgGTtDv~vi~~~~g~--~v~~~s------~~~~lG-g~~i~~~I~~~i~ 238 (346)
T 2fsj_A 188 QPGYGVVIDVGSRTTDVLTINLMDME--PVVELS------FSLQIG-VGDAISALSRKIA 238 (346)
T ss_dssp CSSEEEEEEECSSCEEEEEEETTTTE--ECGGGC------EEESCC-HHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCCcEEEEEEEecCCE--EEeecC------CCcchh-HHHHHHHHHHHHH
Confidence 45789999999999999999985431 111001 111112 5678888876554
No 68
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=40.61 E-value=68 Score=30.71 Aligned_cols=62 Identities=13% Similarity=0.192 Sum_probs=38.2
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCcccc-ccC-chHHHHHHHHHHHHHHHh
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLM-TGS-SHELFDYIAAALAKFVAT 157 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~-~~t-~~~LFd~IA~~I~~fl~~ 157 (402)
.|-+||+|-+++|+.+++..+.....+....+...+-+.+. ++. .++=.+-..+++..|.+.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~ 76 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKL 76 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHH
Confidence 68899999999999999996432223333333444444432 121 345556666777777654
No 69
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=38.16 E-value=32 Score=33.28 Aligned_cols=51 Identities=18% Similarity=0.223 Sum_probs=30.7
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHH
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKF 154 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~f 154 (402)
.++|+|=|.||||+-++. .| .+..+.. -|..+++....++=.-+.+.+.++
T Consensus 7 ~~IavDWGTs~lRa~l~~-~g---~vl~~~~----~~~Gv~~~~~~~f~~~l~~~~~~w 57 (295)
T 3nuw_A 7 RYIAIDWGSTNLRAWLYQ-GE---ECLESRQ----SEAGVTRLNGRSPAAVLAEITQHW 57 (295)
T ss_dssp EEEEEEECSSCEEEEEEE-TT---EEEEEEE----ESCCTTCCTTCCHHHHHHHHTTTT
T ss_pred cEEEEEecchheeeeeec-CC---ceehhhc----CCCchhhcCcccHHHHHHHHHHHh
Confidence 589999999999999886 33 3444332 244444333344444455555544
No 70
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=31.91 E-value=3.8e+02 Score=26.37 Aligned_cols=51 Identities=16% Similarity=0.079 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHcCCCceEEEEEechhHhhhcccccCC-CceEEEE-eecCeeee
Q 015705 206 DVVGELTKAMERIGLDMRVAALVNDTIGTLAGGRYHNK-DAIAAVI-LGTGTNAA 258 (402)
Q Consensus 206 Dv~~lL~~al~r~~l~v~vvAIvNDTVaTLla~ay~~~-~~~iGlI-lGTGtNac 258 (402)
++++-+.+++++.|+++ ..|+|...|.-++....+. +.-+.+| +|-||---
T Consensus 168 ~~v~n~~~~~~~AGL~v--~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdi 220 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSP--FQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGL 220 (419)
T ss_dssp HHHHHHHHHHHTTSCSC--EEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEE
T ss_pred HHHHHHHHHHHHcCCcE--EEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEE
Confidence 47788889999888665 5789999888665322211 1123444 66665443
No 71
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=31.47 E-value=1.2e+02 Score=31.09 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=41.8
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccc-cC-chHHHHHHHHHHHHHHHhc
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMT-GS-SHELFDYIAAALAKFVATE 158 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~-~t-~~~LFd~IA~~I~~fl~~~ 158 (402)
.|=|||+|-.++|..+++..+....++....+...+-+.+-. +. .++=.+-..+++..|....
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~ 76 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERL 76 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999864333333333334455554422 21 4577777788888886654
No 72
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=29.45 E-value=37 Score=33.31 Aligned_cols=53 Identities=17% Similarity=0.279 Sum_probs=31.3
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcceeEEEEeeeeccCccccccCchHHHHHHHHHHHHHH
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREGRVVKQEFEEVSIPPHLMTGSSHELFDYIAAALAKFV 155 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~~~~~~~~~~~~Ip~~~~~~t~~~LFd~IA~~I~~fl 155 (402)
.++|+|=|.||||+-++.- ++ .+..+. .-+..++.....++-+-+.+.+.++.
T Consensus 8 ~~IavDWGTSnlRa~l~~~--~g-~vl~~~----~~~~Gv~~~~~~~f~~~l~~l~~~w~ 60 (330)
T 3t69_A 8 YYAAVDWGTSSFRLWIIGE--DG-AVLAER----RSAEGMTTAAKTGFHTILDGHLAAVS 60 (330)
T ss_dssp CEEEEEECSSCEEEEEECT--TS-CEEEEE----EESCCHHHHHHHCHHHHHHHHHHHTT
T ss_pred CEEEEEecchheehheecC--CC-Cchhhh----cCCcchhhcCcccHHHHHHHHHHHhh
Confidence 5999999999999988633 32 333332 23444443333444455555555554
No 73
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=27.28 E-value=1.4e+02 Score=25.93 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=19.0
Q ss_pred cEEEEEeCCceeEEEEEEEcCC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGR 117 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~ 117 (402)
+.|+||-|-++.=.++++..|+
T Consensus 2 ~ILGIDPGl~~tG~gvi~~~g~ 23 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQVGR 23 (158)
T ss_dssp EEEEEECCSSEEEEEEEEEETT
T ss_pred EEEEEccCCCCeeEEEEEecCC
Confidence 3799999999999999987664
No 74
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=25.10 E-value=1.6e+02 Score=30.68 Aligned_cols=23 Identities=22% Similarity=0.449 Sum_probs=20.2
Q ss_pred ccccEEEEEeCCceeEEEEEEEc
Q 015705 93 EKGLFYALDLGGTNFRVLRVQLG 115 (402)
Q Consensus 93 E~G~fLAlDlGGTNlRV~~V~L~ 115 (402)
+...+|.+|+||.++-|.++++.
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~~~~ 208 (605)
T 2kho_A 186 GNRTIAVYDLGGGTFDISIIEID 208 (605)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEEEEE
Confidence 34579999999999999999995
No 75
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=25.03 E-value=1.8e+02 Score=28.26 Aligned_cols=21 Identities=19% Similarity=0.178 Sum_probs=18.7
Q ss_pred cEEEEEeCCceeEEEEEEEcC
Q 015705 96 LFYALDLGGTNFRVLRVQLGG 116 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g 116 (402)
.+.+||+|-+..|+.+.+...
T Consensus 4 ~~avID~GSns~Rl~I~~~~~ 24 (353)
T 3aap_A 4 CIAVIDAGSTGSRLHIYSYDT 24 (353)
T ss_dssp EEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEEcCCCCeEEEEEEEcC
Confidence 578999999999999999864
No 76
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=24.47 E-value=1.4e+02 Score=28.80 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=40.4
Q ss_pred cEEEEEeCCceeEEEEEEEcCCcc-eeEEEEeeeeccCcccc-ccC-chHHHHHHHHHHHHHHHhcC
Q 015705 96 LFYALDLGGTNFRVLRVQLGGREG-RVVKQEFEEVSIPPHLM-TGS-SHELFDYIAAALAKFVATEG 159 (402)
Q Consensus 96 ~fLAlDlGGTNlRV~~V~L~g~~~-~~~~~~~~~~~Ip~~~~-~~t-~~~LFd~IA~~I~~fl~~~~ 159 (402)
.|-|||+|-.++|+.+.++..++. ..+....+...+-+.+- ++. .++=.+-..+++..|.+...
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~~ 83 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIA 83 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHHH
Confidence 588999999999999999964332 22332333344444432 121 45666777788888876543
No 77
>3tai_A DNA double-strand break repair protein NURA; recombination, hydrolase; HET: DNA; 2.82A {Pyrococcus furiosus} PDB: 3tal_A* 3taz_A*
Probab=23.09 E-value=76 Score=32.50 Aligned_cols=48 Identities=17% Similarity=0.330 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhhccCCCCcceeeeccccCCCCCCccccEEEEE
Q 015705 50 TPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALD 101 (402)
Q Consensus 50 ~~~~~L~~i~~~f~~em~~GL~~~~~s~l~MLPS~v~~lP~G~E~G~fLAlD 101 (402)
+|++.+.+|.+-+.+++++-.+.- .+.|++++...+|+..+ ..+.|+|
T Consensus 24 is~~~~~~I~~~L~~~l~~~~~~~---~ie~i~~~W~elPe~~~-~~iaAVD 71 (471)
T 3tai_A 24 LSKQSIERITKILLDELENVRENE---QIRNIINSWKPLPSPEK-SSIYAVD 71 (471)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCS---SHHHHHHTCBCCCCCCC-CEEEEEE
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhh---chhhhhhhceECCCCCC-ceEEEec
Confidence 789999999999999988887652 67889999999997644 4788888
No 78
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=21.00 E-value=1.4e+02 Score=22.88 Aligned_cols=36 Identities=8% Similarity=0.171 Sum_probs=30.9
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 015705 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (402)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 73 (402)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (90)
T 1mul_A 4 TQLIDVIAEKAELSKTQAKAALESTLAAITESLKEG 39 (90)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 456777777788999999999999999999999763
No 79
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=20.73 E-value=1.5e+02 Score=22.93 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=30.4
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 015705 38 VAILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (402)
Q Consensus 38 ~~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 73 (402)
.++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 4 ~eli~~ia~~~~ls~~~~~~~l~~~~~~i~~~L~~g 39 (94)
T 1p71_A 4 GELVDAVAEKASVTKKQADAVLTAALETIIEAVSSG 39 (94)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356667777778999999999999999999999763
No 80
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=20.54 E-value=2.8e+02 Score=26.17 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=20.8
Q ss_pred CccccEEEEEeCCceeEEEEEEEcC
Q 015705 92 DEKGLFYALDLGGTNFRVLRVQLGG 116 (402)
Q Consensus 92 ~E~G~fLAlDlGGTNlRV~~V~L~g 116 (402)
.....++.+|+||.++-+.+++..+
T Consensus 203 ~~~~~vlV~D~Gggt~dvsv~~~~~ 227 (394)
T 3qfu_A 203 DKEHQIIVYDLGGGTFDVSLLSIEN 227 (394)
T ss_dssp SSCEEEEEEEECSSCEEEEEEEEET
T ss_pred CCCceEEEEEcCCCceeEEEEEEeC
Confidence 3445789999999999999999854
No 81
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=20.12 E-value=1.5e+02 Score=23.01 Aligned_cols=35 Identities=11% Similarity=0.202 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhccC
Q 015705 39 AILKEMEEKCGTPIGKLRQVADAMTVEMHAGLASE 73 (402)
Q Consensus 39 ~~l~~~~~~~~~~~~~L~~i~~~f~~em~~GL~~~ 73 (402)
++++.+.+...++..+...+.+.|.+.|.+.|...
T Consensus 8 eLi~~ia~~~~lsk~~~~~~v~~~~~~i~~~L~~g 42 (93)
T 3rhi_A 8 ELIKNVAQNAEISQKEATVVVQTVVESITNTLAAG 42 (93)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 56666677778999999999999999999999763
Done!