Query 015706
Match_columns 402
No_of_seqs 309 out of 2215
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 17:16:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2och_A Hypothetical protein DN 99.8 8.9E-21 3.1E-25 148.4 8.5 69 1-72 4-72 (73)
2 2dn9_A DNAJ homolog subfamily 99.8 1.1E-20 3.8E-25 149.8 8.5 73 3-75 5-77 (79)
3 1hdj_A Human HSP40, HDJ-1; mol 99.8 1.5E-20 5E-25 148.5 8.7 73 4-77 2-74 (77)
4 1bq0_A DNAJ, HSP40; chaperone, 99.8 4.3E-21 1.5E-25 160.0 4.9 74 4-77 2-75 (103)
5 2ctw_A DNAJ homolog subfamily 99.8 6.5E-20 2.2E-24 154.6 10.4 88 3-100 15-102 (109)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 5.6E-20 1.9E-24 146.8 8.6 72 4-75 8-80 (82)
7 2ctp_A DNAJ homolog subfamily 99.8 8.3E-20 2.8E-24 144.5 8.9 71 3-74 5-75 (78)
8 2ctq_A DNAJ homolog subfamily 99.8 2.6E-20 8.8E-25 157.7 6.2 74 2-75 17-90 (112)
9 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.1E-19 3.6E-24 147.4 8.5 71 3-74 15-85 (88)
10 2o37_A Protein SIS1; HSP40, J- 99.8 1.6E-19 5.4E-24 147.6 8.2 72 1-75 4-75 (92)
11 2dmx_A DNAJ homolog subfamily 99.8 1.9E-19 6.6E-24 146.9 7.8 74 4-77 8-82 (92)
12 2yua_A Williams-beuren syndrom 99.8 2.8E-19 9.6E-24 148.1 8.7 69 3-71 15-83 (99)
13 2ctr_A DNAJ homolog subfamily 99.8 2.5E-19 8.5E-24 145.2 7.7 72 3-75 5-76 (88)
14 2lgw_A DNAJ homolog subfamily 99.8 1.8E-19 6.1E-24 149.5 6.8 73 5-77 2-75 (99)
15 1wjz_A 1700030A21RIK protein; 99.8 2.6E-19 8.8E-24 146.4 7.0 72 2-73 13-90 (94)
16 3apq_A DNAJ homolog subfamily 99.8 8E-19 2.7E-23 161.3 9.4 73 5-77 2-74 (210)
17 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 3.8E-19 1.3E-23 149.6 4.3 72 2-73 12-87 (109)
18 3hho_A CO-chaperone protein HS 99.7 4.9E-17 1.7E-21 147.8 14.0 68 3-70 2-76 (174)
19 3bvo_A CO-chaperone protein HS 99.7 1.4E-16 4.6E-21 148.7 16.0 81 4-84 42-132 (207)
20 1fpo_A HSC20, chaperone protei 99.7 5.3E-17 1.8E-21 147.2 12.8 68 5-72 1-75 (171)
21 3lz8_A Putative chaperone DNAJ 99.7 1.1E-18 3.8E-23 173.2 0.0 70 3-73 26-95 (329)
22 2l6l_A DNAJ homolog subfamily 99.7 2E-17 6.9E-22 147.2 6.7 70 3-72 8-83 (155)
23 2ys8_A RAB-related GTP-binding 99.7 1.2E-17 4E-22 136.1 3.7 62 3-65 25-86 (90)
24 1gh6_A Large T antigen; tumor 99.7 3E-18 1E-22 145.7 -1.4 86 5-103 8-95 (114)
25 1faf_A Large T antigen; J doma 99.6 1.8E-16 6.3E-21 126.1 4.2 65 5-74 11-77 (79)
26 3uo3_A J-type CO-chaperone JAC 99.6 8.2E-16 2.8E-20 140.6 8.7 64 4-70 10-80 (181)
27 2pf4_E Small T antigen; PP2A, 99.6 4.7E-17 1.6E-21 147.7 -0.7 64 5-72 11-76 (174)
28 1iur_A KIAA0730 protein; DNAJ 99.6 2E-16 6.8E-21 128.6 2.5 60 5-64 16-76 (88)
29 2qwo_B Putative tyrosine-prote 99.6 6.1E-16 2.1E-20 126.7 2.1 56 5-60 33-91 (92)
30 1n4c_A Auxilin; four helix bun 99.5 5.4E-16 1.9E-20 141.6 1.0 63 5-67 117-182 (182)
31 3apo_A DNAJ homolog subfamily 99.5 6.2E-16 2.1E-20 167.7 1.1 75 3-77 19-93 (780)
32 3ag7_A Putative uncharacterize 99.5 1.8E-15 6.1E-20 127.0 2.9 59 3-62 39-104 (106)
33 2guz_A Mitochondrial import in 99.5 1E-14 3.6E-19 113.6 2.2 56 5-64 14-70 (71)
34 2y4t_A DNAJ homolog subfamily 98.9 8.5E-10 2.9E-14 108.0 4.5 66 4-69 381-449 (450)
35 2guz_B Mitochondrial import in 98.4 3.9E-07 1.3E-11 69.6 5.0 51 6-60 5-58 (65)
36 3cjl_A Domain of unknown funct 32.9 67 0.0023 25.4 5.0 36 282-317 32-67 (88)
37 2qzg_A Conserved uncharacteriz 32.4 20 0.00068 28.8 1.9 61 268-336 4-67 (94)
38 1u5e_A SRC-associated adaptor 30.1 74 0.0025 28.4 5.6 41 275-315 5-48 (211)
39 1ny9_A Transcriptional activat 21.8 1.6E+02 0.0054 24.4 5.8 53 12-72 71-124 (143)
40 2cqn_A Formin-binding protein 20.8 2.1E+02 0.0071 21.7 5.8 53 17-70 6-61 (77)
No 1
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.83 E-value=8.9e-21 Score=148.40 Aligned_cols=69 Identities=59% Similarity=0.923 Sum_probs=63.3
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCC
Q 015706 1 MVKETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGK 72 (402)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~ 72 (402)
|+.+.+||+||||+++++..+||+|||++++++|||+++++ .+.|+.|++||++|+||.+|..||.+|.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 78899999999999999999999999999999999999754 5789999999999999999999999985
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=149.81 Aligned_cols=73 Identities=52% Similarity=0.861 Sum_probs=68.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 75 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~ 75 (402)
...|||+||||+++++..+||+|||+++++||||++++++.+.++|+.|++||++|+||.+|..||.+|..+.
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 77 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS 77 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence 3679999999999999999999999999999999999888899999999999999999999999999997653
No 3
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=1.5e-20 Score=148.52 Aligned_cols=73 Identities=45% Similarity=0.831 Sum_probs=67.6
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCC
Q 015706 4 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 77 (402)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~ 77 (402)
..|||+||||+++++.++||+|||++++++|||+++ ++.+.+.|+.|++||++|+||.+|..||.+|..++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 368999999999999999999999999999999997 4678899999999999999999999999999876543
No 4
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.82 E-value=4.3e-21 Score=160.03 Aligned_cols=74 Identities=47% Similarity=0.785 Sum_probs=69.6
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCC
Q 015706 4 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 77 (402)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~ 77 (402)
..|||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||+||+||.+|..||.+|..++..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 46999999999999999999999999999999999877888999999999999999999999999999887654
No 5
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=6.5e-20 Score=154.57 Aligned_cols=88 Identities=40% Similarity=0.689 Sum_probs=75.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCCCCCCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIID 82 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~d 82 (402)
...+||+||||+++|+.++||+|||++++++|||++++++.+.++|+.|++||+||+||.+|..||.+|..++
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~------- 87 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL------- 87 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH-------
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc-------
Confidence 4679999999999999999999999999999999999888999999999999999999999999999985432
Q ss_pred hHHHHHhhhcchhHHHhh
Q 015706 83 PAAIFAMLFGSELFEDYI 100 (402)
Q Consensus 83 p~~~f~~~Fg~~~f~~~~ 100 (402)
.....||.+.|..|+
T Consensus 88 ---~~~~~~~~~~~~~~~ 102 (109)
T 2ctw_A 88 ---YVAEQFGEENVNTYF 102 (109)
T ss_dssp ---HHHHHTCTTHHHHHH
T ss_pred ---ccccccCCcchHHHh
Confidence 122345666666664
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=5.6e-20 Score=146.77 Aligned_cols=72 Identities=47% Similarity=0.718 Sum_probs=66.9
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCC
Q 015706 4 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDP-LAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 75 (402)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~-~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~ 75 (402)
..+||+||||+++++.++||+|||+++++||||++++.. .+.++|+.|++||++|+||.+|..||.+|..++
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 579999999999999999999999999999999998654 678899999999999999999999999997754
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=8.3e-20 Score=144.55 Aligned_cols=71 Identities=46% Similarity=0.813 Sum_probs=66.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSG 74 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~ 74 (402)
...|||+||||+++++..+||+|||+++++||||+++ .+.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4679999999999999999999999999999999997 5788999999999999999999999999999764
No 8
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=2.6e-20 Score=157.69 Aligned_cols=74 Identities=31% Similarity=0.613 Sum_probs=69.3
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCC
Q 015706 2 VKETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 75 (402)
Q Consensus 2 ~~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~ 75 (402)
....|||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||+||+||.+|..||.+|..++
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 34689999999999999999999999999999999999888899999999999999999999999999987654
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.80 E-value=1.1e-19 Score=147.40 Aligned_cols=71 Identities=48% Similarity=0.721 Sum_probs=66.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSG 74 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~ 74 (402)
.+.|||+||||+++++.++||+|||+++++||||++++ +.+.++|+.|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 46799999999999999999999999999999999974 678899999999999999999999999999754
No 10
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.6e-19 Score=147.62 Aligned_cols=72 Identities=50% Similarity=0.864 Sum_probs=66.9
Q ss_pred CCCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCC
Q 015706 1 MVKETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 75 (402)
Q Consensus 1 m~~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~ 75 (402)
|+.+.|||+||||+++++.++||+|||+++++||||+++++ .++|+.|++||+||+||.+|..||.+|..++
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 77889999999999999999999999999999999999765 4699999999999999999999999986643
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=1.9e-19 Score=146.87 Aligned_cols=74 Identities=45% Similarity=0.712 Sum_probs=68.1
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCC
Q 015706 4 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPND-PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 77 (402)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~-~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~ 77 (402)
..|||+||||+++++.++||+|||+++++||||+++++ +.+.++|+.|++||++|+||.+|..||.+|..++..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 46899999999999999999999999999999999865 367899999999999999999999999999876544
No 12
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.8e-19 Score=148.06 Aligned_cols=69 Identities=41% Similarity=0.620 Sum_probs=65.6
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYG 71 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G 71 (402)
...+||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||+||+||.+|..||...
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 467999999999999999999999999999999999888889999999999999999999999999854
No 13
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=2.5e-19 Score=145.23 Aligned_cols=72 Identities=47% Similarity=0.748 Sum_probs=67.1
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGI 75 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~ 75 (402)
...+||+||||+++|+.++||+|||+++++||||+++ ++.+.++|+.|++||++|+||.+|..||.+|..++
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 3579999999999999999999999999999999998 67899999999999999999999999999986543
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=1.8e-19 Score=149.53 Aligned_cols=73 Identities=47% Similarity=0.837 Sum_probs=65.2
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCC
Q 015706 5 TEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPND-PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 77 (402)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~-~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~ 77 (402)
+|||+||||+++|+.++||+|||+++++||||++++. ..+.+.|+.|++||++|+||.+|..||.+|..++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 6899999999999999999999999999999999865 357899999999999999999999999999776543
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.77 E-value=2.6e-19 Score=146.37 Aligned_cols=72 Identities=25% Similarity=0.512 Sum_probs=65.7
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHHcCChHHHHHHHhcCCC
Q 015706 2 VKETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPND------PLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS 73 (402)
Q Consensus 2 ~~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~------~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~ 73 (402)
+...|||+||||+++|+..+||+|||+++++||||+++++ +.+.++|+.|++||+||+||.+|..||.+...
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 3567999999999999999999999999999999999753 46789999999999999999999999998754
No 16
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=8e-19 Score=161.35 Aligned_cols=73 Identities=47% Similarity=0.799 Sum_probs=69.3
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCC
Q 015706 5 TEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 77 (402)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~ 77 (402)
.|||++|||+++|+.++||+|||++++++|||++++++++.++|+.|++||++|+||.+|+.||++|..+...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 5899999999999999999999999999999999888899999999999999999999999999999887543
No 17
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.75 E-value=3.8e-19 Score=149.56 Aligned_cols=72 Identities=36% Similarity=0.560 Sum_probs=66.2
Q ss_pred CCCCCchhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCC
Q 015706 2 VKETEYYDVLGVSPTA-SEAEIKKAYYIKARKVHPDKNPN---DPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS 73 (402)
Q Consensus 2 ~~~~dyY~iLgV~~~A-s~~eIKkAYrkla~~~HPDkn~~---~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~ 73 (402)
....|||+||||+++| +.++||+|||++++++|||++++ .+.+.++|+.|++||+||+||.+|..||.+|..
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 4578999999999999 99999999999999999999975 356789999999999999999999999999853
No 18
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.72 E-value=4.9e-17 Score=147.80 Aligned_cols=68 Identities=22% Similarity=0.429 Sum_probs=61.5
Q ss_pred CCCCchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChHHHHHHHhc
Q 015706 3 KETEYYDVLGVSPTAS--EAEIKKAYYIKARKVHPDKNPNDPL-----AAQNFQVLGEAYQVLSDPAQRQAYDAY 70 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As--~~eIKkAYrkla~~~HPDkn~~~~~-----a~~~F~~I~~AY~vLsdp~~R~~YD~~ 70 (402)
..+|||++|||+++++ ..+||++||+++++||||++++.+. +.++|+.|++||+||+||.+|..||..
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3579999999999998 9999999999999999999987654 668999999999999999999999974
No 19
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.71 E-value=1.4e-16 Score=148.70 Aligned_cols=81 Identities=20% Similarity=0.338 Sum_probs=66.5
Q ss_pred CCCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChHHHHHHHh--cCCCC
Q 015706 4 ETEYYDVLGVSPT--ASEAEIKKAYYIKARKVHPDKNPNDPL-----AAQNFQVLGEAYQVLSDPAQRQAYDA--YGKSG 74 (402)
Q Consensus 4 ~~dyY~iLgV~~~--As~~eIKkAYrkla~~~HPDkn~~~~~-----a~~~F~~I~~AY~vLsdp~~R~~YD~--~G~~~ 74 (402)
..|||++|||+++ ++..+||++||+++++||||++++++. +.++|+.|++||+||+||.+|..||. .|..-
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~G~~~ 121 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEI 121 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTCCC
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhcCCCc
Confidence 5799999999986 789999999999999999999986542 55789999999999999999999994 45432
Q ss_pred CCC-CCCCChH
Q 015706 75 IST-EAIIDPA 84 (402)
Q Consensus 75 ~~~-~~~~dp~ 84 (402)
... ....||.
T Consensus 122 ~~e~~~~~d~~ 132 (207)
T 3bvo_A 122 PERTDYEMDRQ 132 (207)
T ss_dssp CSSCSSSSCHH
T ss_pred ccccccCCCHH
Confidence 211 3456665
No 20
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.71 E-value=5.3e-17 Score=147.20 Aligned_cols=68 Identities=22% Similarity=0.368 Sum_probs=62.0
Q ss_pred CCchhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChHHHHHHHhcCC
Q 015706 5 TEYYDVLGVSPTA--SEAEIKKAYYIKARKVHPDKNPNDPL-----AAQNFQVLGEAYQVLSDPAQRQAYDAYGK 72 (402)
Q Consensus 5 ~dyY~iLgV~~~A--s~~eIKkAYrkla~~~HPDkn~~~~~-----a~~~F~~I~~AY~vLsdp~~R~~YD~~G~ 72 (402)
+|||++|||++++ +..+||++||+++++||||++++.+. +.++|+.|++||+||+||.+|..||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 3899999999999 99999999999999999999987653 45799999999999999999999998643
No 21
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.70 E-value=1.1e-18 Score=173.24 Aligned_cols=70 Identities=40% Similarity=0.609 Sum_probs=0.0
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKS 73 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~ 73 (402)
...|||++|||+++|+.++||+|||+||++||||+|+ ++.+.++|++|++||+||+||.+|+.||+++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 4579999999999999999999999999999999998 457889999999999999999999999998543
No 22
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=2e-17 Score=147.21 Aligned_cols=70 Identities=26% Similarity=0.522 Sum_probs=63.7
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHHHcCChHHHHHHHhcCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDP------LAAQNFQVLGEAYQVLSDPAQRQAYDAYGK 72 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~------~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~ 72 (402)
...|||+||||+++|+.++||+|||++++++|||++++.+ .+.++|+.|++||+||+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3579999999999999999999999999999999998653 367899999999999999999999998653
No 23
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.2e-17 Score=136.13 Aligned_cols=62 Identities=32% Similarity=0.457 Sum_probs=57.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHH
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQ 65 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~ 65 (402)
...|||+||||+++|+.++||+|||+++++||||+++ ++.+.++|+.|++||++|+||.+|.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCccccc
Confidence 4689999999999999999999999999999999997 4678899999999999999998875
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.66 E-value=3e-18 Score=145.73 Aligned_cols=86 Identities=22% Similarity=0.414 Sum_probs=70.8
Q ss_pred CCchhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCCCCCCC
Q 015706 5 TEYYDVLGVSPTASE--AEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGISTEAIID 82 (402)
Q Consensus 5 ~dyY~iLgV~~~As~--~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~~~~~d 82 (402)
.+||+||||+++|+. .+||+|||++++++|||++++ .++|+.|++||+||+||.+|+.||.+|..+-...
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~~~~---- 79 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATE---- 79 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCCCCC----
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccccccccc----
Confidence 589999999999999 999999999999999999975 4789999999999999999999999886432211
Q ss_pred hHHHHHhhhcchhHHHhhhhh
Q 015706 83 PAAIFAMLFGSELFEDYIGQL 103 (402)
Q Consensus 83 p~~~f~~~Fg~~~f~~~~G~~ 103 (402)
...||...|++|+...
T Consensus 80 -----~~~~g~p~w~~w~~~~ 95 (114)
T 1gh6_A 80 -----IPTYGTDEWEQWWNAF 95 (114)
T ss_dssp -----CCCCSSSCHHHHHHHH
T ss_pred -----CCCCCCchHHHHHhcc
Confidence 1245666777775433
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.62 E-value=1.8e-16 Score=126.14 Aligned_cols=65 Identities=17% Similarity=0.275 Sum_probs=58.3
Q ss_pred CCchhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCC
Q 015706 5 TEYYDVLGVSPT--ASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSG 74 (402)
Q Consensus 5 ~dyY~iLgV~~~--As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~ 74 (402)
.++|+||||+++ ++..+||+|||++++++|||++++ .++|++|++||++|+|+..|.. +.||..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 469999999999 999999999999999999999853 5799999999999999999988 5677653
No 26
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.61 E-value=8.2e-16 Score=140.63 Aligned_cols=64 Identities=23% Similarity=0.485 Sum_probs=58.8
Q ss_pred CCCchhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhc
Q 015706 4 ETEYYDVL------GVSP-TASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAY 70 (402)
Q Consensus 4 ~~dyY~iL------gV~~-~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~ 70 (402)
.+|||++| |+++ +++..+||+|||+++++||||++++ +.++|+.|++||+||+||.+|..||..
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 47999999 4665 9999999999999999999999975 678999999999999999999999983
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.60 E-value=4.7e-17 Score=147.74 Aligned_cols=64 Identities=23% Similarity=0.453 Sum_probs=57.5
Q ss_pred CCchhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCC
Q 015706 5 TEYYDVLGVSPTAS--EAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGK 72 (402)
Q Consensus 5 ~dyY~iLgV~~~As--~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~ 72 (402)
.+||++|||+++|+ .++||+|||++|+++|||++++ .++|+.|++||+||+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999999 6999999999999999999975 3689999999999999999999999996
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.60 E-value=2e-16 Score=128.56 Aligned_cols=60 Identities=30% Similarity=0.279 Sum_probs=55.6
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChHHH
Q 015706 5 TEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDP-LAAQNFQVLGEAYQVLSDPAQR 64 (402)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~-~a~~~F~~I~~AY~vLsdp~~R 64 (402)
.++|+||||+++|+.++||+|||+++++||||+|++++ .+.++|+.|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 57999999999999999999999999999999998764 5889999999999999998766
No 29
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.56 E-value=6.1e-16 Score=126.67 Aligned_cols=56 Identities=23% Similarity=0.394 Sum_probs=51.6
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHcCC
Q 015706 5 TEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDP---LAAQNFQVLGEAYQVLSD 60 (402)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~---~a~~~F~~I~~AY~vLsd 60 (402)
.++|++|||+++|+..+||+|||++|++||||||++++ .|.++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999998765 378899999999999964
No 30
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.55 E-value=5.4e-16 Score=141.64 Aligned_cols=63 Identities=25% Similarity=0.456 Sum_probs=58.7
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHcCChHHHHHH
Q 015706 5 TEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPL---AAQNFQVLGEAYQVLSDPAQRQAY 67 (402)
Q Consensus 5 ~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~---a~~~F~~I~~AY~vLsdp~~R~~Y 67 (402)
.+||++|||+++|+..+||+|||+++++|||||+++.+. +.++|+.|++||+||+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 689999999999999999999999999999999986553 789999999999999999999765
No 31
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.54 E-value=6.2e-16 Score=167.69 Aligned_cols=75 Identities=45% Similarity=0.793 Sum_probs=40.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCCCCCCC
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGKSGIST 77 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~~~~~~ 77 (402)
.+.|||++|||+++|+.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|+.||++|..+...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 468999999999999999999999999999999999888889999999999999999999999999999876543
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.53 E-value=1.8e-15 Score=127.00 Aligned_cols=59 Identities=20% Similarity=0.304 Sum_probs=52.4
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----HHHHHHHHHHHHHHHcCChH
Q 015706 3 KETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPN---DP----LAAQNFQVLGEAYQVLSDPA 62 (402)
Q Consensus 3 ~~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~---~~----~a~~~F~~I~~AY~vLsdp~ 62 (402)
.+.|||++||++. |+..+||+|||+++++||||||++ ++ .|.++|+.|++||+||+|+.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4579999999996 999999999999999999999863 22 36889999999999999985
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1e-14 Score=113.57 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=50.3
Q ss_pred CCchhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHH
Q 015706 5 TEYYDVLGVSP-TASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQR 64 (402)
Q Consensus 5 ~dyY~iLgV~~-~As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R 64 (402)
.++|+||||++ +++.++||+|||++++++|||++. + .+.|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhc
Confidence 57999999999 799999999999999999999974 3 35999999999999987654
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.88 E-value=8.5e-10 Score=108.01 Aligned_cols=66 Identities=39% Similarity=0.607 Sum_probs=56.0
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hHHHHHHHHHHHHHHHcCChHHHHHHHh
Q 015706 4 ETEYYDVLGVSPTASEAEIKKAYYIKARKVHPDKNPND---PLAAQNFQVLGEAYQVLSDPAQRQAYDA 69 (402)
Q Consensus 4 ~~dyY~iLgV~~~As~~eIKkAYrkla~~~HPDkn~~~---~~a~~~F~~I~~AY~vLsdp~~R~~YD~ 69 (402)
..++|.+||+.+.++..+|+++|+++++++|||+.+.+ ..+.+.|+.|++||++|+||++|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 35899999999999999999999999999999999754 2478899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.36 E-value=3.9e-07 Score=69.63 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=43.8
Q ss_pred CchhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCC
Q 015706 6 EYYDVLGVSPT---ASEAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSD 60 (402)
Q Consensus 6 dyY~iLgV~~~---As~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsd 60 (402)
+-|.||||+++ ++.++|+++||+|....|||+.. + .-....|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S---~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-S---FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-C---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHHH
Confidence 45789999999 99999999999999999999963 3 3567789999999853
No 36
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=32.88 E-value=67 Score=25.40 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=29.1
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhccc
Q 015706 282 RVCQMVLQDNNAKKEELRARAKALKTLGKIFQRAKS 317 (402)
Q Consensus 282 ~VC~kVL~D~~V~~e~R~kRAeAL~~LG~if~~~~~ 317 (402)
.+.++|=.+.+.+.++...=|-||+++|.+|.+-..
T Consensus 32 ~Ive~~~~~~~~~~~~a~af~vGLKLfgevml~~r~ 67 (88)
T 3cjl_A 32 KLLEKVDGKMDMTPEQTQAFMVGLKLFGEVMMQQRK 67 (88)
T ss_dssp HHHHHHTTTSSSCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCcC
Confidence 344555566778999999999999999999988654
No 37
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=32.39 E-value=20 Score=28.80 Aligned_cols=61 Identities=13% Similarity=0.167 Sum_probs=35.1
Q ss_pred HHHHhHHHHHHHHHHHH---HHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcccCCCCCCccccccccccCCC
Q 015706 268 LWKLNVADIEATLSRVC---QMVLQDNNAKKEELRARAKALKTLGKIFQRAKSNNGSEGETVLSGGVHKLNG 336 (402)
Q Consensus 268 lW~~~~~DIE~TlR~VC---~kVL~D~~V~~e~R~kRAeAL~~LG~if~~~~~~~~e~~~~~~~~~~~~~~~ 336 (402)
++..-+.+-|.++++++ +.|.+|.+||...|+.=.++...|. +.++.-..|.-+.|..||+
T Consensus 4 ~~~~~~~e~e~~ik~~~~~L~~I~~D~sVPRNIRraA~ea~~~L~--------~e~~~~~vRAAtAIs~LDe 67 (94)
T 2qzg_A 4 MFSAKKLSPADKLKNISSMLEEIVEDTTVPRNIRAAADNAKNALH--------NEEQELIVRSATAIQYLDD 67 (94)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTT--------CTTSCHHHHHHHHHHHHHH
T ss_pred chhhhhcchHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHh--------CCCcchhHHHHHHHHHHHH
Confidence 34444455555555554 4566899999999997777766542 2223333444455666664
No 38
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=30.13 E-value=74 Score=28.45 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 015706 275 DIEATLSRVCQMV---LQDNNAKKEELRARAKALKTLGKIFQRA 315 (402)
Q Consensus 275 DIE~TlR~VC~kV---L~D~~V~~e~R~kRAeAL~~LG~if~~~ 315 (402)
||...|.+||.=| |+.+.+++..|-+|..=|..|..+....
T Consensus 5 ~~~~l~~~~~~~~~~~l~~e~ls~~~~~~~~~~~~~~~~~~~~~ 48 (211)
T 1u5e_A 5 EIRNLLADVETFVADTLKGENLSKKAKEKRESLIKKIKDVKSVY 48 (211)
T ss_dssp HHHHHHHHHHHHHHTTTTTCBCCHHHHHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHhhcchhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 6777777777766 8899999999999999888877776655
No 39
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=21.78 E-value=1.6e+02 Score=24.39 Aligned_cols=53 Identities=21% Similarity=0.208 Sum_probs=30.2
Q ss_pred CCCCCCC-HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChHHHHHHHhcCC
Q 015706 12 GVSPTAS-EAEIKKAYYIKARKVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAYGK 72 (402)
Q Consensus 12 gV~~~As-~~eIKkAYrkla~~~HPDkn~~~~~a~~~F~~I~~AY~vLsdp~~R~~YD~~G~ 72 (402)
|++|+.. ..+|-+.++.......++.. .+.|..|.+-| +.||.-+..||.+|.
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~s------~e~~~~L~~mY--v~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDCG------YEMHTCLGEMY--VSDERFTRNIDAAKP 124 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCCC------HHHHHHHHHHT--TSTHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHH--hcCHHHHHhHcccCh
Confidence 4444432 23344455554434344432 24677777776 478888888888753
No 40
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=20.82 E-value=2.1e+02 Score=21.68 Aligned_cols=53 Identities=8% Similarity=0.154 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHcCCh-HHHHHHHhc
Q 015706 17 ASEAEIKKAYYIKARKVHPDKNPNDP--LAAQNFQVLGEAYQVLSDP-AQRQAYDAY 70 (402)
Q Consensus 17 As~~eIKkAYrkla~~~HPDkn~~~~--~a~~~F~~I~~AY~vLsdp-~~R~~YD~~ 70 (402)
.-...++.+++.+.+...|.....+. .+...|.... +|..+.++ .++..|+.|
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeY 61 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDF 61 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHH
Confidence 34567889999998887787776554 3555666655 79999775 566666665
Done!