BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015712
(402 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp.
japonica GN=Os01g0184500 PE=2 SV=1
Length = 625
Score = 259 bits (662), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/288 (48%), Positives = 183/288 (63%), Gaps = 14/288 (4%)
Query: 72 PTE-ETQQRVPSKPEKDSFILENFKLRKLNGSAKTNNPENKPSPPQPEQQQLSNIASERE 130
PTE ET R P + +LE + R L G P P P Q E+ + +E
Sbjct: 47 PTEPETTAR--EAPSRHELLLERLRQRHLKGV-----PAATPRPAQREKGRGGGGGGAQE 99
Query: 131 KSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSG 190
EVV SF+ELGL E++ A+ +MG+ P+EIQCVG+PAVL G SVVL S +GSG
Sbjct: 100 LQQKRRVEVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSG 159
Query: 191 RTLAYLLPLVQMLRRDEALL--PMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSS 248
+TLAYLLPLVQ+LRRDEA+L MKP PRA+VLC T E +Q F +AK ISH AR S+
Sbjct: 160 KTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRST 219
Query: 249 MENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFG 308
M +GG + ED N P+ M++ TP +L HI+D N+ DI+Y+VLDEADT+FD+GFG
Sbjct: 220 MVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFG 279
Query: 309 PEISKILNPLKDSALKSNGQGFQTILVTA----AIAEMLGEQLSSLME 352
P+I K L PLK+ A K QGFQT+LVTA A+ +++ E+ ++
Sbjct: 280 PDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVH 327
>sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana
GN=RH39 PE=2 SV=2
Length = 621
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 168/243 (69%), Gaps = 8/243 (3%)
Query: 116 QPEQQQLSNIASEREKSS--GSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIP 173
+P QQ+ S++ E+SS + ++V +FQELGL E++ A++++ + VP+EIQC+GIP
Sbjct: 85 KPPQQRPSSVVGVEEESSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIP 144
Query: 174 AVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALL--PMKPMHPRAIVLCTTEESADQ 231
AV+ KSVVL S +GSG+TLAYLLP+VQ++R DEA L KP PR +VLC T E ++Q
Sbjct: 145 AVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQ 204
Query: 232 GFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDI 291
+ +AK ISH AR S + +GG + ED N I M++ TP +LQHIE+ N+ DI
Sbjct: 205 VYRVAKSISHHARFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDI 264
Query: 292 RYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTA----AIAEMLGEQL 347
Y+VLDEADT+FDRGFGPEI K L PL ALK+N QGFQT+LVTA A+ +++ E+
Sbjct: 265 AYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEF 324
Query: 348 SSL 350
+
Sbjct: 325 QGI 327
>sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DRS1 PE=3 SV=1
Length = 686
Score = 108 bits (271), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 113/199 (56%), Gaps = 13/199 (6%)
Query: 122 LSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSV 181
L N +E ++ ++A +FQEL L ++K+++++G VP+ +Q IP L GK +
Sbjct: 177 LDNFYESQETNTSASALKSKTFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDI 236
Query: 182 VLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESA----DQGFHMAK 237
V S+ +GSG+T AYL+P+++ L L +AI+L T E A D G + +
Sbjct: 237 VASAQTGSGKTAAYLIPIIERL-----LYVKNSTSTKAIILTPTRELAIQVHDVGRKLGQ 291
Query: 238 FISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR-NVSCDDIRYVVL 296
F+S+ L+ M GG+S K E ++IATP ++ HI + + S +D++ +++
Sbjct: 292 FVSN---LNFGMAVGGLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVEDVQVLII 348
Query: 297 DEADTLFDRGFGPEISKIL 315
DEAD + + GF E+++IL
Sbjct: 349 DEADRMLEEGFQEELTEIL 367
>sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum
GN=helA PE=3 SV=1
Length = 1091
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 112/202 (55%), Gaps = 15/202 (7%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQM 202
FQ + L ++KA+ K G VP+ IQ IP +L+G +V + +GSG+T A+++P++Q
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291
Query: 203 LRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVS-SKALED 261
L + + RA++L T E A Q F + K S +L + + GG S D
Sbjct: 292 LGDHSTTVGV-----RAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTD 346
Query: 262 VSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDS 321
++ P ++IATP ++ H+ + +S ++Y+V DEAD LF+ GF ++++IL+ L ++
Sbjct: 347 LARNP-DIIIATPGRLMHHLLETGMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKLSEN 405
Query: 322 ALKSNGQGFQTILVTAAIAEML 343
QT+L +A + +L
Sbjct: 406 R--------QTLLFSATLPSLL 419
>sp|A3BT52|RH29_ORYSJ DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
japonica GN=Os08g0416100 PE=2 SV=2
Length = 851
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 128/241 (53%), Gaps = 29/241 (12%)
Query: 109 ENKPSPPQPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQ 168
E+KP P +P+++ AS+R+ SG F+ +GL E+ + V G VP+ IQ
Sbjct: 26 EHKPLPGRPKRE--GEGASKRKAKSGG-------FESMGLCEEVYRGVRHKGYRVPTPIQ 76
Query: 169 CVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEES 228
+P +L G + + +GSG+T A+L+P++Q LRR +A + RA++L T +
Sbjct: 77 RKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGI-----RALILSPTRDL 131
Query: 229 ADQGFHMAKFISHCARLDSSMENGGVSSKA-LEDVSNAPIGMLIATPSEVLQH---IEDR 284
A Q A+ + L S+ GG S ++ E+++ P ++IATP ++ H +ED
Sbjct: 132 ATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP-DIIIATPGRLVHHLAEVEDL 190
Query: 285 NVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLG 344
N+ + YVV DEAD+LF G ++ IL+ L D+ QT+L +A + + L
Sbjct: 191 NLRT--VEYVVFDEADSLFSLGLIQQLHDILHKLSDTR--------QTLLFSATLPQALA 240
Query: 345 E 345
+
Sbjct: 241 D 241
>sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium
discoideum GN=ddx27 PE=3 SV=1
Length = 783
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 110/181 (60%), Gaps = 9/181 (4%)
Query: 138 EVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLL 197
E + +F+EL L ++KAV+K+G P+ IQ IP LNGK ++ S+ +GSG+T A+LL
Sbjct: 187 EELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLL 246
Query: 198 PLVQ-MLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSS 256
P+++ +L RD + R ++L T E A Q + + ++ + + S + GG+S+
Sbjct: 247 PVLERLLFRDSEYRAI-----RVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSN 301
Query: 257 KALE-DVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEADTLFDRGFGPEISKI 314
KA E ++ +P ++IATP ++ H+ + + DD+ ++LDEAD L D GF EI+KI
Sbjct: 302 KAQEVELRKSP-DVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKI 360
Query: 315 L 315
+
Sbjct: 361 V 361
>sp|P44701|SRMB_HAEIN ATP-dependent RNA helicase SrmB homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=srmB PE=3
SV=1
Length = 439
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+S F++ L E++KA+EK G P+ IQ IPA + V+ S+ +G+G+T A+LLP
Sbjct: 3 LSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPA 62
Query: 200 VQML----RRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVS 255
+Q L RR KP PR +VL T E A Q A+ ++ L+ + GGV+
Sbjct: 63 LQHLLDYPRR-------KPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVA 115
Query: 256 SKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKI 314
+ DV N +++ATP +LQ+I++ N C + ++ DEAD + GFG + KI
Sbjct: 116 YQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKI 174
>sp|A2YV85|RH29_ORYSI DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp.
indica GN=OsI_028228 PE=2 SV=2
Length = 851
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 128/241 (53%), Gaps = 29/241 (12%)
Query: 109 ENKPSPPQPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQ 168
E+KP P +P+++ AS+++ SG F+ +GL E+ + V G VP+ IQ
Sbjct: 26 EHKPPPGRPKRE--GEGASKKKAKSGG-------FESMGLCEEVYRGVRHKGYRVPTPIQ 76
Query: 169 CVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEES 228
+P +L G + + +GSG+T A+L+P++Q LRR +A + RA++L T +
Sbjct: 77 RKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGI-----RALILSPTRDL 131
Query: 229 ADQGFHMAKFISHCARLDSSMENGGVSSKA-LEDVSNAPIGMLIATPSEVLQH---IEDR 284
A Q A+ + L S+ GG S ++ E+++ P ++IATP ++ H +ED
Sbjct: 132 ATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENP-DIIIATPGRLVHHLAEVEDL 190
Query: 285 NVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLG 344
N+ + YVV DEAD+LF G ++ IL+ L D+ QT+L +A + + L
Sbjct: 191 NLRT--VEYVVFDEADSLFSLGLIQQLHDILHKLSDTR--------QTLLFSATLPQALA 240
Query: 345 E 345
+
Sbjct: 241 D 241
>sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41
PE=1 SV=2
Length = 622
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 15/207 (7%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ SF+E+ A +++ ++K G+ P+ IQ GIP +L+G+ ++ + +GSG+TL + LP+
Sbjct: 180 IKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239
Query: 200 VQMLRRDEALLPM-KPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSS------MENG 252
+ E LP K P +++C + E A Q + ++ + DSS + G
Sbjct: 240 IMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIG 299
Query: 253 GVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEIS 312
G+S K + + M++ATP ++ ++ + VS D RY+ LDEAD + D GF +I
Sbjct: 300 GMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIR 359
Query: 313 KILNPLKDSALKSNGQGFQTILVTAAI 339
I + K GQ QT+L +A +
Sbjct: 360 TIFSYFK-------GQR-QTLLFSATM 378
>sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41
PE=1 SV=2
Length = 622
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 15/207 (7%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ SF+E+ A +++ ++K G+ P+ IQ GIP +L+G+ ++ + +GSG+TL + LP+
Sbjct: 180 IKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239
Query: 200 VQMLRRDEALLPM-KPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSS------MENG 252
+ E LP K P +++C + E A Q + ++ + DSS + G
Sbjct: 240 IMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIG 299
Query: 253 GVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEIS 312
G+S K + + M++ATP ++ ++ + VS D RY+ LDEAD + D GF +I
Sbjct: 300 GMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIR 359
Query: 313 KILNPLKDSALKSNGQGFQTILVTAAI 339
I + K GQ QT+L +A +
Sbjct: 360 TIFSYFK-------GQR-QTLLFSATM 378
>sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP10 PE=3 SV=1
Length = 900
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 119/223 (53%), Gaps = 17/223 (7%)
Query: 126 ASEREKSS--GSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVL 183
A+ R+ S+ G + FQ LGL A ++KA+ + G VP+ IQ IP VL+ + VV
Sbjct: 69 AANRKASNLRGRTVKKGGGFQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVG 128
Query: 184 SSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCA 243
+ +GSG+T A+++P+++ L+ A RA++L + E A Q + K +
Sbjct: 129 MARTGSGKTAAFVIPMIEKLKSHSA-----KFGSRALILSPSRELALQTLKVVKELGRGT 183
Query: 244 RLDSSMENGGVS-SKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTL 302
L S + GG S + E +++ P ++IATP L + ++ IRYVV DEAD L
Sbjct: 184 DLKSVLLVGGDSLEEQFEYMASNP-DIIIATPGRFLHLKVEMSLDLSSIRYVVFDEADRL 242
Query: 303 FDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
F+ GF ++++IL+ L S QT+L +A + + L E
Sbjct: 243 FEMGFATQLTEILHGLPSSR--------QTLLFSATLPKSLVE 277
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 103/178 (57%), Gaps = 5/178 (2%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
+F EL L +KA+E+MG +EIQ GIP +L GK V+ ++ +GSG+TLA+L+P V+
Sbjct: 113 AFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVE 172
Query: 202 MLRRDEALLPMKPMHPRAIVLCT-TEESADQGFHMAKFISHCARLDSSMENGGVSSKALE 260
MLR L KP + +++ + T E A Q F +A+ + + GG + +A
Sbjct: 173 MLRS----LKFKPRNGTGVIVVSPTRELALQIFGVARDLMKHHSQTYGIVIGGANRRAEA 228
Query: 261 DVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
+ + + +LIATP +L H+++ ++R +V+DEAD + + GF E+ +I+ L
Sbjct: 229 EKLSKGVNLLIATPGRLLDHLQNTPFVFKNLRSLVIDEADRILEIGFEDEMRQIIKIL 286
>sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp.
japonica GN=Os03g0108600 PE=2 SV=2
Length = 641
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
SF+E+G E++ A+ G PS IQ + VL GKS ++ SGSG+TLAYL P+VQ
Sbjct: 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 300
Query: 202 MLRRD--EALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCAR-LDSSMENGGVSSKA 258
LR++ E L P +PR +VL T E A Q + + IS S + GG K
Sbjct: 301 NLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKT 360
Query: 259 LEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLF 303
+ + + +LIATP L +++ V +++R VVLDE D L+
Sbjct: 361 QLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILY 405
>sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-10 PE=3 SV=1
Length = 934
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 20/227 (8%)
Query: 119 QQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNG 178
Q++ SNI + K G FQ +GL A +++A+ + G VP+ IQ IP +L
Sbjct: 84 QRKSSNIQGKSVKKGGG-------FQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILER 136
Query: 179 KSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKF 238
K VV + +GSG+T A+++P+++ L+ + RA+++ + E A Q + K
Sbjct: 137 KDVVGMARTGSGKTAAFVIPMIERLKGHSPRV-----GSRALIMSPSRELALQTLKVVKE 191
Query: 239 ISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDE 298
+ L + + GG S + + + ++IATP L + N+S I+YVV DE
Sbjct: 192 LGRGTDLKTVLLVGGDSLEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLASIKYVVFDE 251
Query: 299 ADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
AD LF+ GF E+++IL+ L S QT+L +A + L E
Sbjct: 252 ADRLFEMGFATELTEILHALPPSR--------QTLLFSATLPSSLVE 290
>sp|Q6BTL5|DRS1_DEBHA ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DRS1 PE=3 SV=1
Length = 771
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 12/208 (5%)
Query: 114 PPQPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIP 173
P + + ++ ++ E+++ + ++ ++FQ L L ++K + ++G PS IQ IP
Sbjct: 231 PVEDTAEDMAEFYADEEEATTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIP 290
Query: 174 AVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESA---- 229
L GK +V + +GSG+T AY++P+++ L P K R IVL T E A
Sbjct: 291 IALLGKDIVAGAVTGSGKTAAYMIPIIERL----LYKPAKISSTRVIVLAPTRELAIQVC 346
Query: 230 DQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR-NVSC 288
D G + +F+++ L+ + GG++ + E ++IATP ++ HI + + S
Sbjct: 347 DVGKKIGQFVNN---LNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSI 403
Query: 289 DDIRYVVLDEADTLFDRGFGPEISKILN 316
D + +V+DEAD + D GF E+++IL+
Sbjct: 404 DSLEVLVIDEADRMLDEGFQAELTEILS 431
>sp|Q8K4L0|DDX54_MOUSE ATP-dependent RNA helicase DDX54 OS=Mus musculus GN=Ddx54 PE=1 SV=1
Length = 874
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 20/230 (8%)
Query: 116 QPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAV 175
+P+ +++ ++++K SG FQ +GL + K + K G VP+ IQ IP +
Sbjct: 77 EPDTREMVRAQNKKKKKSGG-------FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 129
Query: 176 LNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHM 235
L+GK VV + +GSG+T +LLP+ + L+ A RA++L T E A Q
Sbjct: 130 LDGKDVVAMARTGSGKTACFLLPMFERLKARSA-----QTGARALILSPTRELALQTMKF 184
Query: 236 AKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVV 295
K + L +++ GG + + ++IATP ++ + N+ + YVV
Sbjct: 185 TKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVV 244
Query: 296 LDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
DEAD LF+ GF ++ +I+ L G QT+L +A + ++L E
Sbjct: 245 FDEADRLFEMGFAEQLQEIIGRLPG--------GHQTVLFSATLPKLLVE 286
>sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=dbp10 PE=3 SV=1
Length = 869
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 123/242 (50%), Gaps = 21/242 (8%)
Query: 109 ENKPSPPQ----PEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVP 164
++K PP+ EQQ +N + K G + FQ +GL A ++KA+ + G VP
Sbjct: 36 KSKRQPPKKAFIAEQQTSANRKASNLK--GRTVKKGGGFQAMGLSANLLKAIARKGFSVP 93
Query: 165 SEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCT 224
+ IQ IP +++ + VV + +GSG+T A+++P+++ L+ + R +VL
Sbjct: 94 TPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKLKSHST-----KVGARGLVLSP 148
Query: 225 TEESADQGFHMAKFISHCARLDSSMENGGVS-SKALEDVSNAPIGMLIATPSEVLQHIED 283
+ E A Q + K + L S + GG S + ++ P ++IATP L +
Sbjct: 149 SRELALQTLKVVKELGRGTDLKSVLLVGGDSLEEQFAMIAGNP-DIIIATPGRFLHLKVE 207
Query: 284 RNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEML 343
N+ IRYVV DEAD LF+ GF ++++IL+ L + QT+L +A + + L
Sbjct: 208 MNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPANR--------QTLLFSATLPKSL 259
Query: 344 GE 345
E
Sbjct: 260 VE 261
>sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp.
japonica GN=Os02g0150100 PE=2 SV=2
Length = 627
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 105/185 (56%), Gaps = 7/185 (3%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
F++L L M++ + + G+ P+ IQ G+P VL+G+ ++ + +GSG+TL ++LPL+
Sbjct: 183 DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIM 242
Query: 202 MLRRDEALLPMKPMH-PRAIVLCTTEESADQGFH-MAKFI-----SHCARLDSSMENGGV 254
+ ++E ++P+ P P +++C + E A Q + + +F+ + + + GGV
Sbjct: 243 VALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGV 302
Query: 255 SSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKI 314
+A DV + +++ATP + + + ++ D+ RY+ LDEAD L D GF +I ++
Sbjct: 303 DMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREV 362
Query: 315 LNPLK 319
+ K
Sbjct: 363 FDHFK 367
>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp10 PE=3 SV=1
Length = 929
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 126 ASEREKSSGSNAEVV---SSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVV 182
AS K+S V FQ +GL A ++KA+ + G VP+ IQ IP +++G+ VV
Sbjct: 71 ASANRKASNLKGRTVKKGGGFQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVV 130
Query: 183 LSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHC 242
+ +GSG+T A+++P+++ L+ + R ++L + E A Q + K +
Sbjct: 131 GMARTGSGKTAAFVIPMIEKLKSHST-----KVGARGLILSPSRELALQTLKVVKELGKG 185
Query: 243 ARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTL 302
L S + GG S + + ++IATP L + N+ IRYVV DEAD L
Sbjct: 186 TDLKSVLLVGGDSLEEQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRL 245
Query: 303 FDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
F+ GF ++++IL L + QT+L +A + + L E
Sbjct: 246 FEMGFADQLTEILYGLPANR--------QTLLFSATLPKSLVE 280
>sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DRS1 PE=3 SV=3
Length = 741
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 109/196 (55%), Gaps = 13/196 (6%)
Query: 126 ASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSS 185
A E+E S + ++V ++FQ L L ++K + ++G PS IQ IP L G+ +V +
Sbjct: 208 ADEKETKS-AKSQVHTTFQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIALLGRDIVAGA 266
Query: 186 GSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESA----DQGFHMAKFISH 241
+GSG+T AY++P+++ L P K R IVL T E A D G + +F+++
Sbjct: 267 VTGSGKTAAYMIPIIERL----LYKPSKVASTRVIVLTPTRELAIQVGDVGKKIGQFVNN 322
Query: 242 CARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR-NVSCDDIRYVVLDEAD 300
L+ + GG++ + E + ++IATP ++ HI + + S D + +V+DEAD
Sbjct: 323 ---LNFGLAVGGLNLRQQEQQLKSRPDVVIATPGRLIDHIRNSPSFSIDSLEVLVIDEAD 379
Query: 301 TLFDRGFGPEISKILN 316
+ D GF E+++IL+
Sbjct: 380 RMLDEGFQVELTEILS 395
>sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DRS1 PE=3 SV=2
Length = 705
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 21/214 (9%)
Query: 116 QPEQQQLSNIASEREKSSGSNAEV---------VSSFQELGLKAEMIKAVEKMGLFVPSE 166
+ E +Q I+ E S+ + AE ++SFQ L L ++K V +G VPS
Sbjct: 164 ESEDEQEQEISENDEDSAAAIAEFYEESKTTEKITSFQALQLSRPLLKGVGNLGYTVPSA 223
Query: 167 IQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTE 226
IQ IP + GK +V + +GSG+T AYL+P+++ L P R IVL T
Sbjct: 224 IQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIERL----IYKPAAVSATRVIVLTPTR 279
Query: 227 ESA----DQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIE 282
E A D G + +F+ A L+ + GG++ + E + +++ATP ++ HI
Sbjct: 280 ELAIQVCDVGKKLGQFV---ANLNFGLAVGGLNLRQQEQQLKSRPDIVVATPGRLIDHIR 336
Query: 283 DR-NVSCDDIRYVVLDEADTLFDRGFGPEISKIL 315
+ + S +++ +V+DEAD + + GF E+++IL
Sbjct: 337 NSPSFSIENLEVLVMDEADRMLEEGFQVELTEIL 370
>sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp10 PE=3 SV=1
Length = 928
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 21/231 (9%)
Query: 118 EQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLN 177
EQQ +N + K G + FQ +GL A ++KA+ + G VP+ IQ IP +++
Sbjct: 68 EQQTSANRKAANLK--GRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMD 125
Query: 178 GKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAK 237
+ VV + +GSG+T A+++P+++ L+ + R ++L + E A Q + K
Sbjct: 126 DRDVVGMARTGSGKTAAFVIPMIEKLKSHSS-----KFGARGLILSPSRELALQTLKVVK 180
Query: 238 FISHCARLDSSMENGGVSSKALEDVSNAPIG---MLIATPSEVLQHIEDRNVSCDDIRYV 294
+ L S + GG S LE+ G ++IATP L + N+ IRYV
Sbjct: 181 ELGKGTDLKSVLLVGGDS---LEEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYV 237
Query: 295 VLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
V DEAD LF+ GF ++++IL+ L + QT+L +A + + L E
Sbjct: 238 VFDEADRLFEMGFAAQLTEILHGLPTTR--------QTLLFSATLPKSLVE 280
>sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=DBP10 PE=3 SV=1
Length = 762
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 121/232 (52%), Gaps = 23/232 (9%)
Query: 118 EQQQLSNIASEREKSSGS----NAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIP 173
+QQ+ SN + +GS +A+ FQ +GL + +++A+ + G VP+ IQ IP
Sbjct: 65 KQQRSSN------RKTGSLQSKSAKKSGGFQAMGLNSNLLRAISRKGFSVPTPIQRKTIP 118
Query: 174 AVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGF 233
VL + VV + +GSG+T A+++P+++ L+ A + RAI++ + E A Q
Sbjct: 119 LVLERRDVVGMARTGSGKTAAFVIPMIERLKAHSARVGA-----RAIIMSPSRELALQTL 173
Query: 234 HMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRY 293
+ K + L + + GG S + + A ++IATP L + +++ +RY
Sbjct: 174 KVVKELGKGTDLKTVLLVGGDSLEEQFGLMAANPDIIIATPGRFLHLKVEMSLNLSSVRY 233
Query: 294 VVLDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
VV DEAD LF+ GF ++++IL+ L S QT+L +A + L E
Sbjct: 234 VVFDEADRLFEMGFAAQLTEILHALPPSR--------QTLLFSATLPSSLVE 277
>sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=has-1 PE=3 SV=1
Length = 578
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 5/185 (2%)
Query: 135 SNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLA 194
S A + F EL L + +KA+ +MG +EIQ GIP +L GK V+ ++ +GSG+TLA
Sbjct: 101 SIATNATDFSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLA 160
Query: 195 YLLPLVQMLRRDEALLPMKPMHPR-AIVLCTTEESADQGFHMAKFISHCARLDSSMENGG 253
+L+P ++ML + L KP + AIV+ T E A Q F +A+ + + GG
Sbjct: 161 FLIPAIEML----SSLRFKPRNGTGAIVVTPTRELALQIFGVARELMKNHSQTYGVVIGG 216
Query: 254 VSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISK 313
+ +A + + +LIATP +L H+++ ++R +++DEAD + + GF E+ +
Sbjct: 217 ANRRAEAEKLGKGVNLLIATPGRLLDHLQNTPFVFKNMRSLIIDEADRILEIGFEDEMRQ 276
Query: 314 ILNPL 318
I+ L
Sbjct: 277 IIKIL 281
>sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp10 PE=1 SV=1
Length = 848
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 14/218 (6%)
Query: 126 ASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSS 185
++ R K N + S+FQ +GL +++A+ K G P+ IQ IP +L G+ VV +
Sbjct: 55 SNRRTKGKKGNGKA-SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMA 113
Query: 186 GSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARL 245
+GSG+T A+++P+++ L+ + + RA++L E A Q + K S L
Sbjct: 114 RTGSGKTAAFVIPMIEHLKS-----TLANSNTRALILSPNRELALQTVKVVKDFSKGTDL 168
Query: 246 DSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDR 305
S GGVS + + + +++ATP L + + I YVV DEAD LF+
Sbjct: 169 RSVAIVGGVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEM 228
Query: 306 GFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEML 343
GF ++++IL+ L S QT+L +A + L
Sbjct: 229 GFAAQLTEILHALPTSR--------QTLLFSATLPRTL 258
>sp|Q8TDD1|DDX54_HUMAN ATP-dependent RNA helicase DDX54 OS=Homo sapiens GN=DDX54 PE=1 SV=2
Length = 881
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 114/230 (49%), Gaps = 20/230 (8%)
Query: 116 QPEQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAV 175
+P+ +++ ++++K SG FQ +GL + K + K G VP+ IQ IP +
Sbjct: 78 EPDTREMVRAQNKKKKKSGG-------FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVI 130
Query: 176 LNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHM 235
L+GK VV + +GSG+T +LLP+ + L+ A RA++L T E A Q
Sbjct: 131 LDGKDVVAMARTGSGKTACFLLPMFERLKTHSA-----QTGARALILSPTRELALQTLKF 185
Query: 236 AKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVV 295
K + L +++ GG + + ++IATP ++ + ++ + YVV
Sbjct: 186 TKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVV 245
Query: 296 LDEADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
DEAD LF+ GF ++ +I+ L G QT+L +A + ++L E
Sbjct: 246 FDEADRLFEMGFAEQLQEIIARLPG--------GHQTVLFSATLPKLLVE 287
>sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium
discoideum GN=ddx41 PE=1 SV=1
Length = 671
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 131/269 (48%), Gaps = 22/269 (8%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+++F+E+ + +I + + G+ PS IQ G+P +L+G+ ++ + +GSG+TL + LP+
Sbjct: 221 ITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPM 280
Query: 200 VQMLRRDEALLP-MKPMHPRAIVLCTTEESADQGFHMAKFISHC-------ARLDSSMEN 251
V +E LP ++ P ++LC + E A Q + + ++ +L + +
Sbjct: 281 VLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAI 340
Query: 252 GGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEI 311
GG+ + E + + M+IATP +L + + ++ +Y+ LDEAD L D GF +I
Sbjct: 341 GGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDI 400
Query: 312 SKILNPLKDSALKSNGQGFQTILVTAAIAEMLGEQLSSLMECLERDNAGKVTAMLLEMDQ 371
+L+ + QT+L +A + + + E S + N G+ A L + Q
Sbjct: 401 RSVLDNFTNQR--------QTLLFSATMPKKIQEFARSALVLPVEVNVGRAGAANLNVTQ 452
Query: 372 AEVFDLTESQDALKKKVVEAMDSLHLSAP 400
F E+ K+V ++ L + P
Sbjct: 453 EVEFVKPEA------KIVYLLECLQKTPP 475
>sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp10 PE=3 SV=1
Length = 932
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 22/226 (9%)
Query: 126 ASEREKSSGSNAEVV---SSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVV 182
AS K+S V FQ +GL A ++KA+ + G VP+ IQ IP ++ + VV
Sbjct: 72 ASANRKASNLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVV 131
Query: 183 LSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHC 242
+ +GSG+T A+++P++Q L+ + R ++L + E A Q + K +
Sbjct: 132 GMARTGSGKTAAFVIPMIQKLKSHST-----QVGARGLILSPSRELALQTLKVVKELGKG 186
Query: 243 ARLDSSMENGGVSSKALEDVSNAPIG---MLIATPSEVLQHIEDRNVSCDDIRYVVLDEA 299
L + + GG S LE+ + G ++IATP L + N+ IRYVV DEA
Sbjct: 187 TDLKAVLLVGGDS---LEEQFSMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEA 243
Query: 300 DTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
D LF+ GF ++++IL+ L + QT+L +A + + L E
Sbjct: 244 DRLFEMGFAAQLTEILHGLPSTR--------QTLLFSATLPKSLVE 281
>sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp10
PE=3 SV=1
Length = 934
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 15/228 (6%)
Query: 118 EQQQLSNIASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLN 177
EQQ +N + K G + FQ +GL A ++KA+ + G VP+ IQ IP +++
Sbjct: 69 EQQTSANRKASNLK--GRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMD 126
Query: 178 GKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAK 237
+ VV + +GSG+T A+++P+++ L+ + R ++L + E A Q + K
Sbjct: 127 DQDVVGMARTGSGKTAAFVIPMIEKLKSHST-----KVGARGLILSPSRELALQTLKVVK 181
Query: 238 FISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLD 297
+ L S + GG S + + ++IATP L + N+ IRYVV D
Sbjct: 182 ELGRGTDLKSVLLVGGDSLEEQFAMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFD 241
Query: 298 EADTLFDRGFGPEISKILNPLKDSALKSNGQGFQTILVTAAIAEMLGE 345
EAD LF+ GF ++++IL+ L + QT+L +A + + L E
Sbjct: 242 EADRLFEMGFAAQLTEILHGLPANR--------QTLLFSATLPKSLVE 281
>sp|Q9H8H2|DDX31_HUMAN Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens GN=DDX31
PE=1 SV=2
Length = 851
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 9/204 (4%)
Query: 141 SSFQELGLKAEMIKAVEK-MGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
++F ELGL +I + + + + +Q IP +L G+ ++ S +GSG+TLAY +P+
Sbjct: 230 AAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPV 289
Query: 200 VQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFH-MAKFISHCARLDSSMENGGVSSKA 258
VQ L+ E+ + + P A+VL T E A Q F + K + + + GG K+
Sbjct: 290 VQSLQAMESKI-QRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKS 348
Query: 259 LEDVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEADTLFDRGFGPEISKILNP 317
+ I +LI+TP ++ HI+ +N+ +R++V DEAD + D GF +I+ ILN
Sbjct: 349 EKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILN- 407
Query: 318 LKDSALKSNGQGFQTILVTAAIAE 341
A+ + Q Q +L++A + E
Sbjct: 408 ----AVNAECQKRQNVLLSATLTE 427
>sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP10 PE=3
SV=1
Length = 897
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Query: 106 NNPENKPSPPQPEQQQLSNIASEREKSS--GSNAEVVSSFQELGLKAEMIKAVEKMGLFV 163
NNPE L AS R+ ++ G + FQ +GL ++KA+ + G V
Sbjct: 45 NNPEPGNDDTDEAFIALQQAASFRKATNLKGRTVKKGGGFQAMGLNNNLLKAITRKGFSV 104
Query: 164 PSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLC 223
P+ IQ IP +L+ K +V + +GSG+T A+++P+++ LR A RA+++
Sbjct: 105 PTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIEKLRAHSARFGT-----RALIMS 159
Query: 224 TTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIED 283
+ E A Q + K S L + GG S + A ++IATP L +
Sbjct: 160 PSRELAIQTLKVVKEFSRGTDLKCVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVE 219
Query: 284 RNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
++ I+YVV DEAD LF+ GF ++++IL+ L
Sbjct: 220 MSLDLSSIKYVVFDEADRLFEMGFAAQLTEILHAL 254
>sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rrp3 PE=3 SV=1
Length = 465
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 102/183 (55%), Gaps = 12/183 (6%)
Query: 136 NAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAY 195
N E +F+ELG+ E+ +A EK+G P+ IQ IP VLN + V+ + +GSG+T A+
Sbjct: 41 NNEAPKTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAF 100
Query: 196 LLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVS 255
LP++Q L + P A+VL T E A Q + I + S + GG+
Sbjct: 101 ALPVIQELWNN-------PSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMD 153
Query: 256 --SKALEDVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEADTLFDRGFGPEIS 312
++A+ +S P +L+ TP ++ H+E+ + S +++Y+++DEAD L D FGP I
Sbjct: 154 MVTQAVA-LSKKP-HVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIID 211
Query: 313 KIL 315
KIL
Sbjct: 212 KIL 214
>sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis (strain
RS) GN=DBP10 PE=3 SV=1
Length = 927
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQM 202
FQ +GL A ++KA+ + G VP+ IQ IP VL+ + VV + +GSG+T A+++P+++
Sbjct: 83 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 142
Query: 203 LRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDV 262
L+ + R ++L + E A Q + K + L + GG S LE+
Sbjct: 143 LKSHST-----KVGSRGLILSPSRELALQTLKVVKELGRGTDLKCVLLVGGDS---LEEQ 194
Query: 263 SNAPIG---MLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLK 319
G ++IATP L + N+ I+YVV DEAD LF+ GF ++++IL+ L
Sbjct: 195 FGYMAGNPDIIIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLP 254
Query: 320 DSALKSNGQGFQTILVTAAIAEMLGE 345
Q QT+L +A + + L E
Sbjct: 255 --------QSRQTLLFSATLPKSLVE 272
>sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=has1 PE=3 SV=1
Length = 576
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 6/178 (3%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQM 202
F EL L +KA+ +MG +EIQ IP L G+ ++ ++ +GSG+TLA+L+P V+M
Sbjct: 100 FDELNLSEPTMKAIRQMGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEM 159
Query: 203 LRRDEALLPMKPMHPRAIVLCT-TEESADQGFHMAKFISHCARLDSSMENGGVSSKALED 261
L + L KP + +++ T T E A Q F +AK + + GG + +A +
Sbjct: 160 L----SALRFKPRNGTGVIIITPTRELALQIFGVAKELCEFHSQTYGIVIGGANRRAEAE 215
Query: 262 VSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
N + +LIATP +L H+++ + + + +VLDEAD D GF E+ +I+ L
Sbjct: 216 KLNKGVNLLIATPGRLLDHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIVKIL 273
>sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis
thaliana GN=RH43 PE=3 SV=1
Length = 542
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 105/187 (56%), Gaps = 7/187 (3%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ +F ++ + +++ ++ G+ P+ IQ G+P VL+G+ ++ + +GSG+TL ++LP+
Sbjct: 96 IKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPM 155
Query: 200 VQMLRRDEALLPMKPMH-PRAIVLCTTEESADQGFHMA-KFISHCA-----RLDSSMENG 252
+ + ++E ++P+ P A+V+C + E A Q + + +F++ RL S + G
Sbjct: 156 IILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIG 215
Query: 253 GVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEIS 312
GV ++ DV + +++ATP + + + +S D R + LDEAD L D GF +I
Sbjct: 216 GVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIR 275
Query: 313 KILNPLK 319
+ + K
Sbjct: 276 HVFDHFK 282
>sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DRS1 PE=3 SV=1
Length = 613
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 125 IASEREKSSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLS 184
IA E+SS +SFQ L L ++K + ++ P+ IQ IP L GK +V
Sbjct: 116 IADFYEESSPQQTH--TSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAG 173
Query: 185 SGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFIS-HCA 243
+ +GSG+T AY++P++ E LL + I+L T E A Q + K +S H
Sbjct: 174 AQTGSGKTGAYMIPII------ERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVN 227
Query: 244 RLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR-NVSCDDIRYVVLDEADTL 302
L+ + GG++ + E+ ++IATP ++ HI + + S DI+ +V+DEAD +
Sbjct: 228 NLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRM 287
Query: 303 FDRGFGPEISKILN 316
+ GF E+++IL+
Sbjct: 288 LEEGFQDELTEILS 301
>sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster
GN=abs PE=1 SV=1
Length = 619
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 21/268 (7%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ SF+E+ ++ + G+ P+ IQ G+P VL G+ ++ + +GSG+TL ++LP+
Sbjct: 176 IRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPV 235
Query: 200 VQMLRRDEALLPM-KPMHPRAIVLCTTEESADQGF----HMAKFISHCA--RLDSSMENG 252
+ E LP + P +++C + E A Q H +K + C + S + G
Sbjct: 236 IMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMG 295
Query: 253 GVSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEIS 312
G+ DV + + +++ATP ++ ++ + ++ D RY+ +DEAD + D GF ++
Sbjct: 296 GLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVR 355
Query: 313 KILNPLKDSALKSNGQGFQTILVTAAIAEMLGEQLSSLMECLERDNAGKVTAMLLEMDQA 372
I + K GQ QT+L +A + + + S + N G+ A + + Q
Sbjct: 356 TIFSFFK-------GQR-QTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQ 407
Query: 373 EVFDLTESQDALKKKVVEAMDSLHLSAP 400
+ E+ KVV +D L +AP
Sbjct: 408 VEYVKQEA------KVVYLLDCLQKTAP 429
>sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP2 PE=1 SV=1
Length = 546
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+++F E G ++ V+ G P+ IQC G P L+G+ +V + +GSG+TL+Y LP
Sbjct: 112 ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 171
Query: 200 VQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGV-SSKA 258
+ + L P P +VL T E A Q H +R+ ++ GGV S+
Sbjct: 172 IVHINAQPLLAPGD--GPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQ 229
Query: 259 LEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
+ D+S ++IATP ++ +E + + Y+VLDEAD + D GF P+I KI++ +
Sbjct: 230 IRDLSRGS-EIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI 288
Query: 319 K 319
+
Sbjct: 289 R 289
>sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP2 PE=3 SV=1
Length = 546
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+++F E G ++ V+ G P+ IQC G P L+G+ +V + +GSG+TL+Y LP
Sbjct: 112 ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 171
Query: 200 VQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGV-SSKA 258
+ + L P P +VL T E A Q H +R+ ++ GGV S+
Sbjct: 172 IVHINAQPLLAPGD--GPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQ 229
Query: 259 LEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
+ D+S ++IATP ++ +E + + Y+VLDEAD + D GF P+I KI++ +
Sbjct: 230 IRDLSRGS-EIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI 288
Query: 319 K 319
+
Sbjct: 289 R 289
>sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp10 PE=3 SV=1
Length = 935
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 16/205 (7%)
Query: 119 QQQLSNIASEREKSS--GSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVL 176
QQQ S + R+ S+ G + FQ +GL A ++KA+ + G VP+ IQ IP ++
Sbjct: 68 QQQTS---ANRKASNLKGRTVKKGGGFQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIM 124
Query: 177 NGKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMA 236
+ + VV + +GSG+T A+++P+++ LR + R ++L + E A Q +
Sbjct: 125 DDQDVVGMARTGSGKTAAFVIPMIEKLRSHST-----KVGARGLILSPSRELALQTLKVV 179
Query: 237 KFISHCARLDSSMENGGVSSKALEDVSNAPIG---MLIATPSEVLQHIEDRNVSCDDIRY 293
K + L + GG S LE+ G ++IATP L + N+ IRY
Sbjct: 180 KELGKGTDLKCVLLVGGDS---LEEQFTMMAGNPDIVIATPGRFLHLKVEMNLDLYSIRY 236
Query: 294 VVLDEADTLFDRGFGPEISKILNPL 318
VV DEAD LF+ GF ++++IL+ L
Sbjct: 237 VVFDEADRLFEMGFAAQLTEILHGL 261
>sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=dbp10 PE=3 SV=1
Length = 936
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQM 202
FQ +GL A ++KA+ + G VP+ IQ IP ++ + VV + +GSG+T A+++P+++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 203 LRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALEDV 262
L+ R ++L + E A Q + K + L S + GG S LE+
Sbjct: 153 LKSHST-----KFGARGLILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDS---LEEQ 204
Query: 263 SNAPIG---MLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPLK 319
G ++IATP L + N+ I+YVV DEAD LF+ GF ++++IL+ L
Sbjct: 205 FGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLP 264
Query: 320 DSALKSNGQGFQTILVTAAIAEMLGE 345
+ QT+L +A + + L E
Sbjct: 265 STR--------QTLLFSATLPKSLVE 282
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ +F E G ++K V++ G P+ IQC G P L+G+ ++ + +GSG+TL+Y LP
Sbjct: 113 IRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPG 172
Query: 200 VQMLRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGV-SSKA 258
+ + L P P +VL T E A Q +R+ ++ GGV S+
Sbjct: 173 IVHINAQPLLSPGD--GPVVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQ 230
Query: 259 LEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
+ D+ + +LIATP ++ +E + + Y+VLDEAD + D GF P+I KI++ +
Sbjct: 231 IRDLQRG-VEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI 289
Query: 319 K 319
+
Sbjct: 290 R 290
>sp|Q2GMX1|HAS1_CHAGB ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=HAS1 PE=3 SV=1
Length = 586
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 99/178 (55%), Gaps = 5/178 (2%)
Query: 142 SFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQ 201
+F EL L + + ++ +MG +EIQ GIP +L GK V+ ++ +GSG+TLA+L+P ++
Sbjct: 113 AFSELNLSDKTMMSINEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIE 172
Query: 202 MLRRDEALLPMKPMHPRAIVLCT-TEESADQGFHMAKFISHCARLDSSMENGGVSSKALE 260
ML L KP + +++ T T E A Q F +A+ + + GG + +A E
Sbjct: 173 MLNS----LRFKPRNGTGVIVVTPTRELALQIFGVARELMKNHSQTYGVVIGGANIRAEE 228
Query: 261 DVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
D + +LIATP +L H+ + +++ +++DEAD + + GF E+ I+ L
Sbjct: 229 DKLGKGVNLLIATPGRLLDHLRRGSFVFKNLKSLIIDEADRILEVGFEDEMRHIVKIL 286
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 14/186 (7%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
V +F++ G ++++ A++K P+ IQC +P VL+G+ V+ + +GSG+T A++LP+
Sbjct: 227 VKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPM 286
Query: 200 VQM------LRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGG 253
+ L+RDE P ++ T E A Q F AK S L S GG
Sbjct: 287 IVHIMDQPELQRDEG--------PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGG 338
Query: 254 VSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISK 313
+S A +++ATP ++ ++ + ++ Y+VLDEAD +FD GF P++
Sbjct: 339 MSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRS 398
Query: 314 ILNPLK 319
I+ ++
Sbjct: 399 IVGQIR 404
>sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DRS1 PE=3 SV=1
Length = 725
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 132 SSGSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGR 191
S + EV +F +L L ++K + +G PS IQ IP L GK ++ + +GSG+
Sbjct: 197 SENAKKEVHKTFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGK 256
Query: 192 TLAYLLPLVQMLRRDEALLPMKPMHPRAIVLCTTEE----SADQGFHMAKFISHCARLDS 247
T A+++P+++ L P K R IVL T E AD G + +F+S+ L
Sbjct: 257 TAAFMIPIIERL----LYKPAKVASTRVIVLTPTRELAIQVADVGKKIGQFVSN---LTF 309
Query: 248 SMENGGVSSKALEDVSNAPIGMLIATPSEVLQHIEDR-NVSCDDIRYVVLDEADTLFDRG 306
+ GG++ + E + ++IATP + HI + + + D + +V+DEAD + + G
Sbjct: 310 GLAVGGLNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDG 369
Query: 307 FGPEISKILNPL 318
F E+++I++ L
Sbjct: 370 FQDELNEIMSLL 381
>sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana
GN=RH21 PE=2 SV=1
Length = 733
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
+ S++E L +E++KAVE+ G PS IQ IP L + V+ + +GSG+T A++LP+
Sbjct: 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 371
Query: 200 VQMLRRDEALLPMKPMH----PRAIVLCTTEESADQ-GFHMAKFISHCA-RLDSSMENGG 253
+ + R L PM + P A+V+ T E A Q KF + R+ S +
Sbjct: 372 LAYISR---LPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQS 428
Query: 254 VSSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISK 313
+ + L+ I +IATP ++ +E R + YVVLDEAD + D GF P+++
Sbjct: 429 IEEQGLKITQGCEI--VIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAG 486
Query: 314 ILNPLKDSALK 324
+L+ + S LK
Sbjct: 487 VLDAMPSSNLK 497
>sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAS1 PE=1 SV=1
Length = 505
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 6/187 (3%)
Query: 134 GSNAEVVSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTL 193
G V F+EL L +KA+EKMG + +Q IP +L G+ V+ ++ +GSG+TL
Sbjct: 35 GEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTL 94
Query: 194 AYLLPLVQMLRRDEALLPMKPMHPRAIVLCT-TEESADQGFHMAKFISHCARLDSSMENG 252
A+L+P +++L L KP + I++ T T E A Q F +A+ + + G
Sbjct: 95 AFLIPAIELLHS----LKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIG 150
Query: 253 GVSSKALEDVSNAPIGMLIATPSEVLQHIED-RNVSCDDIRYVVLDEADTLFDRGFGPEI 311
G + + + + MLIATP +L H+++ + +++ +++DEAD + + GF E+
Sbjct: 151 GANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEM 210
Query: 312 SKILNPL 318
+I+ L
Sbjct: 211 RQIIKIL 217
>sp|O60173|DBP7_SCHPO ATP-dependent RNA helicase dbp7 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp7 PE=3 SV=1
Length = 709
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 33/221 (14%)
Query: 118 EQQQLSNIASEREKSSGSNAEV-VSSFQELGLKAEMIKAVE-KMGLFVPSEIQCVGIPAV 175
E Q+SNI + +E SNA + ++F + L ++ + KM + P+ IQ +PA+
Sbjct: 117 EDNQISNIGTTKE---ASNAPIKTTNFAGVQLDTQLADHLNNKMNISAPTAIQSCCLPAL 173
Query: 176 LN--GKSVVLSSGSGSGRTLAYLLPLVQMLRRDEALLPMKPMHPR-----AIVLCTTEES 228
LN K + + +GSG+TLAYLLP+VQ L R LP K +H R A+++ T E
Sbjct: 174 LNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIR----LP-KNLHTRTSGIYAVIMAPTREL 228
Query: 229 ADQGFHMAK---------FISHCARLDSSMENGGVSSKALEDVSNAPIGMLIATPSEVLQ 279
Q +++A +I C + GG K+ + + +LI TP +
Sbjct: 229 CQQIYNVANKLNNNPLSHWIVSCNVI------GGEKKKSEKARIRKGVNILIGTPGRLAD 282
Query: 280 HIEDRN-VSCDDIRYVVLDEADTLFDRGFGPEISKILNPLK 319
H+E+ + +R+VVLDE D L D GF ++KIL+ L+
Sbjct: 283 HLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLE 323
>sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP2 PE=3 SV=1
Length = 552
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 140 VSSFQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPL 199
V++F E G ++K V++ G P+ IQC G P L G+ V+ + +GSG+TL+Y LP
Sbjct: 115 VTNFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPA 174
Query: 200 VQMLRRDEALLPMKPM-----HPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGV 254
+ + +PM P +VL T E A Q +++ ++ GGV
Sbjct: 175 I-------VHINAQPMLSHGDGPIVLVLAPTRELAVQIQQECSKFGKSSKIRNTCVYGGV 227
Query: 255 -SSKALEDVSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISK 313
+ + D++ + ++IATP +L +E + + Y+VLDEAD + D GF P+I K
Sbjct: 228 PRGQQIRDLARG-VEIVIATPGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRK 286
Query: 314 ILNPLK 319
I++ ++
Sbjct: 287 IVDQIR 292
>sp|A4R5B8|DBP10_MAGO7 ATP-dependent RNA helicase DBP10 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP10 PE=3 SV=1
Length = 914
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 21/207 (10%)
Query: 143 FQELGLKAEMIKAVEKMGLFVPSEIQCVGIPAVLNGKSVVLSSGSGSGRTLAYLLPLVQM 202
FQ +GL +++A+ + G VP+ IQ IP +L+ + VV + +GSG+T A+++P+++
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 203 LRRDEALLPMKPMHPRAIVLCTTEESADQGFHMAKFISHCARLDSSMENGGVSSKALED- 261
LR A + RA+++ + E A Q + K L + + GG S LED
Sbjct: 152 LRAHSARVG-----ARALIMSPSRELALQTLKVVKEFGKGTDLKTVLLVGGDS---LEDQ 203
Query: 262 ---VSNAPIGMLIATPSEVLQHIEDRNVSCDDIRYVVLDEADTLFDRGFGPEISKILNPL 318
++ P ++IATP L + ++ I+YVV DEAD LF+ GF ++++IL+ L
Sbjct: 204 FGFMTTNP-DIIIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLTEILHSL 262
Query: 319 KDSALKSNGQGFQTILVTAAIAEMLGE 345
S QT+L +A + L E
Sbjct: 263 PPSR--------QTLLFSATLPRSLVE 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,382,598
Number of Sequences: 539616
Number of extensions: 5844766
Number of successful extensions: 22049
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 19297
Number of HSP's gapped (non-prelim): 1593
length of query: 402
length of database: 191,569,459
effective HSP length: 120
effective length of query: 282
effective length of database: 126,815,539
effective search space: 35761981998
effective search space used: 35761981998
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)