Query 015713
Match_columns 402
No_of_seqs 224 out of 1815
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 17:23:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015713.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015713hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 2.2E-40 7.6E-45 339.2 23.0 302 89-397 17-330 (451)
2 3juk_A UDP-glucose pyrophospho 100.0 1.5E-38 5.1E-43 306.2 21.3 245 92-374 2-272 (281)
3 3brk_X Glucose-1-phosphate ade 100.0 9.8E-38 3.4E-42 317.2 26.8 282 90-392 10-313 (420)
4 4ecm_A Glucose-1-phosphate thy 100.0 9.5E-36 3.3E-40 285.4 25.8 237 91-375 23-262 (269)
5 2e3d_A UTP--glucose-1-phosphat 100.0 6.4E-35 2.2E-39 283.8 24.5 246 91-376 7-285 (302)
6 1tzf_A Glucose-1-phosphate cyt 100.0 9.9E-35 3.4E-39 275.1 22.5 246 92-374 2-252 (259)
7 2ux8_A Glucose-1-phosphate uri 100.0 7.7E-35 2.6E-39 282.8 19.6 249 90-376 12-283 (297)
8 3pnn_A Conserved domain protei 100.0 3.9E-34 1.3E-38 279.4 20.7 257 89-372 2-291 (303)
9 2pa4_A UTP-glucose-1-phosphate 100.0 1.2E-33 4E-38 278.2 22.4 251 90-376 10-286 (323)
10 4evw_A Nucleoside-diphosphate- 100.0 5.7E-34 2E-38 271.8 19.0 230 95-370 2-245 (255)
11 1fxo_A Glucose-1-phosphate thy 100.0 1.5E-32 5.1E-37 267.1 24.6 236 92-374 2-243 (293)
12 1lvw_A Glucose-1-phosphate thy 100.0 4.1E-32 1.4E-36 264.4 26.2 236 92-374 3-244 (295)
13 1mc3_A Glucose-1-phosphate thy 100.0 1.8E-32 6E-37 267.1 19.6 236 92-374 3-244 (296)
14 2qh5_A PMI, ALGA, mannose-6-ph 100.0 8.2E-32 2.8E-36 263.3 18.4 243 92-373 4-285 (308)
15 3st8_A Bifunctional protein GL 100.0 4.4E-30 1.5E-34 266.8 20.6 240 90-370 10-257 (501)
16 1jyk_A LICC protein, CTP:phosp 100.0 1.1E-29 3.7E-34 241.7 16.0 221 92-372 25-252 (254)
17 2x65_A Mannose-1-phosphate gua 100.0 6.4E-30 2.2E-34 253.3 13.4 233 93-366 2-270 (336)
18 1hm9_A GLMU, UDP-N-acetylgluco 100.0 1.2E-28 4.2E-33 252.7 22.4 231 93-372 12-250 (468)
19 2cu2_A Putative mannose-1-phos 100.0 1.1E-28 3.8E-33 244.5 14.7 236 92-371 2-270 (337)
20 3oam_A 3-deoxy-manno-octuloson 100.0 2.7E-27 9.2E-32 224.9 23.2 238 92-373 2-250 (252)
21 2ggo_A 401AA long hypothetical 100.0 9.2E-28 3.2E-32 241.5 19.1 222 93-375 1-227 (401)
22 4fce_A Bifunctional protein GL 99.9 5.9E-27 2E-31 239.2 19.8 231 91-373 7-245 (459)
23 2v0h_A Bifunctional protein GL 99.9 2.9E-26 1E-30 233.9 20.1 231 91-373 4-242 (456)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 8.1E-25 2.8E-29 208.9 23.2 238 91-369 8-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 1.3E-24 4.4E-29 208.4 22.2 238 91-370 17-263 (264)
26 2y6p_A 3-deoxy-manno-octuloson 99.9 2E-24 6.9E-29 201.2 21.7 225 92-370 2-231 (234)
27 1h7e_A 3-deoxy-manno-octuloson 99.9 4.8E-24 1.6E-28 200.2 19.3 230 92-373 2-240 (245)
28 2xme_A CTP-inositol-1-phosphat 99.9 1.7E-24 5.8E-29 202.2 13.2 214 90-369 16-231 (232)
29 1vic_A 3-deoxy-manno-octuloson 99.9 9.9E-23 3.4E-27 193.9 23.1 246 92-375 2-256 (262)
30 4fcu_A 3-deoxy-manno-octuloson 99.9 2.8E-22 9.7E-27 190.9 22.1 238 93-373 2-251 (253)
31 3f1c_A Putative 2-C-methyl-D-e 99.9 5.7E-22 1.9E-26 187.3 19.1 231 90-374 1-236 (246)
32 2vsh_A TARI, 2-C-methyl-D-eryt 99.9 6.2E-22 2.1E-26 184.1 17.6 223 93-371 3-234 (236)
33 1ezi_A CMP-N-acetylneuraminic 99.9 2.3E-21 7.7E-26 180.3 17.7 214 92-372 4-225 (228)
34 2xwl_A 2-C-methyl-D-erythritol 99.9 2.7E-21 9.1E-26 178.5 17.3 214 92-372 2-220 (223)
35 1vgw_A 4-diphosphocytidyl-2C-m 99.9 2E-20 6.7E-25 173.8 22.3 220 91-370 5-228 (231)
36 2yc3_A 2-C-methyl-D-erythritol 99.9 1.4E-21 4.8E-26 181.3 13.5 220 91-372 3-226 (228)
37 2dpw_A Hypothetical protein TT 99.8 1.8E-21 6.3E-26 182.1 7.2 200 92-364 2-231 (232)
38 1i52_A 4-diphosphocytidyl-2-C- 99.8 5.3E-19 1.8E-23 165.1 19.7 221 90-374 5-231 (236)
39 1qwj_A Cytidine monophospho-N- 99.8 2.6E-19 9E-24 167.0 15.6 217 91-373 2-223 (229)
40 2waw_A MOBA relate protein; un 99.8 1.1E-18 3.8E-23 157.7 14.5 187 92-371 5-196 (199)
41 3rsb_A Adenosylcobinamide-phos 99.8 4.3E-19 1.5E-23 161.0 11.7 130 93-251 1-137 (196)
42 2wee_A MOBA-related protein; u 99.8 1.2E-18 4.3E-23 157.3 12.6 186 92-370 5-195 (197)
43 2icy_A Probable UTP-glucose-1- 99.8 8.8E-18 3E-22 172.5 19.5 253 91-372 78-374 (469)
44 2px7_A 2-C-methyl-D-erythritol 99.8 8.8E-18 3E-22 157.5 16.3 206 92-373 25-234 (236)
45 1vpa_A 2-C-methyl-D-erythritol 99.8 3.7E-17 1.3E-21 152.0 19.4 215 92-373 13-230 (234)
46 3q80_A 2-C-methyl-D-erythritol 99.7 2.9E-16 9.8E-21 147.4 20.0 217 92-370 7-229 (231)
47 2e8b_A Probable molybdopterin- 99.7 7.1E-17 2.4E-21 147.7 10.6 180 90-370 12-198 (201)
48 2i5k_A UTP--glucose-1-phosphat 99.7 1E-15 3.5E-20 157.9 19.4 249 90-372 90-391 (488)
49 3d5n_A Q97W15_sulso; NESG, SSR 99.7 1.2E-16 4.2E-21 145.7 10.6 183 92-372 2-190 (197)
50 1jv1_A Glcnac1P uridyltransfer 99.7 1.7E-15 5.8E-20 157.0 19.1 210 91-322 101-343 (505)
51 1e5k_A Molybdopterin-guanine d 99.7 1.5E-15 5.1E-20 139.1 15.9 117 90-243 4-122 (201)
52 3ngw_A Molybdopterin-guanine d 99.6 8.9E-14 3E-18 128.3 17.4 186 93-375 1-197 (208)
53 1w55_A ISPD/ISPF bifunctional 99.5 9.3E-15 3.2E-19 146.2 9.8 197 90-367 1-202 (371)
54 2oeg_A UTP-glucose-1-phosphate 99.5 2.4E-13 8.2E-18 140.4 16.9 263 91-375 74-397 (505)
55 3oc9_A UDP-N-acetylglucosamine 99.5 8.8E-13 3E-17 132.5 19.7 210 91-321 34-275 (405)
56 2yqc_A UDP-N-acetylglucosamine 99.4 7.8E-13 2.7E-17 136.5 15.4 211 91-323 102-352 (486)
57 3r3i_A UTP--glucose-1-phosphat 98.2 1.7E-05 5.9E-10 81.7 14.8 252 89-370 124-428 (528)
58 3gue_A UTP-glucose-1-phosphate 98.0 0.00019 6.4E-09 73.5 17.0 261 91-372 75-390 (484)
59 3ogz_A UDP-sugar pyrophosphory 97.7 0.00051 1.7E-08 72.1 15.2 173 91-269 113-320 (630)
60 2i5e_A Hypothetical protein MM 97.3 0.00035 1.2E-08 63.4 6.1 105 91-234 2-111 (211)
61 2iu8_A LPXD, UDP-3-O-[3-hydrox 97.1 1.1E-05 3.7E-10 80.4 -6.6 104 214-357 11-118 (374)
62 3cgx_A Putative nucleotide-dip 94.8 0.82 2.8E-05 42.2 15.3 92 124-238 37-130 (242)
63 3bcv_A Putative glycosyltransf 85.1 8.5 0.00029 33.8 11.4 101 119-245 12-118 (240)
64 1qg8_A Protein (spore coat pol 82.8 25 0.00084 31.1 19.7 111 118-243 7-121 (255)
65 1xhb_A Polypeptide N-acetylgal 67.6 76 0.0026 31.2 13.7 98 125-243 43-146 (472)
66 2ffu_A Ppgalnact-2, polypeptid 58.8 84 0.0029 31.2 12.2 92 126-243 81-178 (501)
67 2d7i_A Polypeptide N-acetylgal 54.3 1.1E+02 0.0039 31.1 12.4 101 118-240 118-225 (570)
68 2z86_A Chondroitin synthase; G 54.2 97 0.0033 31.6 12.0 105 118-244 99-207 (625)
69 2z86_A Chondroitin synthase; G 52.2 1E+02 0.0035 31.4 11.8 99 118-239 381-482 (625)
70 3ckj_A Putative uncharacterize 47.9 1.6E+02 0.0056 27.3 11.6 51 192-248 117-170 (329)
71 3f1y_A Mannosyl-3-phosphoglyce 35.6 1.6E+02 0.0056 28.4 9.7 52 192-249 165-219 (387)
72 4fix_A UDP-galactofuranosyl tr 34.5 2.4E+02 0.0081 29.5 11.2 106 119-246 187-303 (657)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=2.2e-40 Score=339.20 Aligned_cols=302 Identities=55% Similarity=0.977 Sum_probs=226.7
Q ss_pred CCCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcc
Q 015713 89 DPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVN 168 (402)
Q Consensus 89 ~~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~ 168 (402)
+|++|+|||||||.||||+|||..+||||+||+|+||||+|++++|.++|+++|+|+++++.+++.+|+.+.| +.+..
T Consensus 17 ~~~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~--~~~~~ 94 (451)
T 1yp2_A 17 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMG 94 (451)
T ss_dssp HHHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHC--C----
T ss_pred cccceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHHHHhhhh--hcccc
Confidence 4778999999999999999999999999999999889999999999999999999999999999999997654 11110
Q ss_pred -c-CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCccHHHHHHHHHhCCCcEEEE
Q 015713 169 -F-GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVS 246 (402)
Q Consensus 169 -~-~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~di~~~l~~h~~~~aditi~ 246 (402)
+ ..+.++++...|.+ ...+|.+||+++|+.+++++++ ...++|+|++||+++..++.++++.|.++++++|++
T Consensus 95 ~~~~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~~~~---~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~ 169 (451)
T 1yp2_A 95 GYKNEGFVEVLAAQQSP--ENPDWFQGTADAVRQYLWLFEE---HTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVA 169 (451)
T ss_dssp ----CCEEEEEESCSST--TSCCCCCSHHHHHHHTHHHHTT---SCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEE
T ss_pred cccccCcEEEecccccc--cccccccCcHHHHHHHHHHHHh---cCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEE
Confidence 1 12236666544432 1235678999999999988852 135899999999999999999999999999999999
Q ss_pred EEEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCC
Q 015713 247 CVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP 326 (402)
Q Consensus 247 ~~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~ 326 (402)
+.+.+.+.+.+||++.+|++|+|+.|.|||.....+.++++.++++-.+.......+++++|+|+|++++|..+++...+
T Consensus 170 ~~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~ 249 (451)
T 1yp2_A 170 ALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFP 249 (451)
T ss_dssp EEEECHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCT
T ss_pred EEEcChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhcc
Confidence 88875323678999999988999999999975322222233333321000000125789999999999998777776555
Q ss_pred CCCchhhccHHhhhcC-CcEEEEEEcCeEEecCCHHHHHHHHhHhhccc-CCccc--------cccccCCCccccccccc
Q 015713 327 LSNDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSL-RSLNF--------MIPRHLSIRLLDSCHPL 396 (402)
Q Consensus 327 ~~~d~~~~ii~~li~~-~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~-~~~~~--------t~~~~~pp~~~~~~~~~ 396 (402)
...++.+++++.++++ .++++|.++++|.|||||++|.+|++.++.+. +..++ +.....|++.+..++|.
T Consensus 250 ~~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~~I~ 329 (451)
T 1yp2_A 250 GANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKMLDADVT 329 (451)
T ss_dssp TCCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEEEEEEEE
T ss_pred cccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEEcceEEe
Confidence 5567778999999987 68999999999999999999999999999776 33332 56777788777555553
Q ss_pred c
Q 015713 397 K 397 (402)
Q Consensus 397 ~ 397 (402)
+
T Consensus 330 ~ 330 (451)
T 1yp2_A 330 D 330 (451)
T ss_dssp E
T ss_pred C
Confidence 3
No 2
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=1.5e-38 Score=306.23 Aligned_cols=245 Identities=19% Similarity=0.259 Sum_probs=197.4
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcc---
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVN--- 168 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~--- 168 (402)
.|+|||||||.||||+|+|..+||||+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+...+.+...+.
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~~ 80 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN 80 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC--------CC
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhhhhhhccc
Confidence 57999999999999999999999999999999 99999999999999999999999999999988864322211000
Q ss_pred ------------cCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-----HHH
Q 015713 169 ------------FGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-----YTE 231 (402)
Q Consensus 169 ------------~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-----i~~ 231 (402)
++ +.+....+. +..||+++|++++.+++ .++|+|++||++++.+ +.+
T Consensus 81 ~~~~~~~~~~~~~~---~~i~~~~~~-------~~~Gt~~al~~a~~~l~------~~~~lv~~~D~~~~~~~~~~~l~~ 144 (281)
T 3juk_A 81 KENALKSIRNIIEK---CCFSYVRQK-------QMKGLGHAILTGEALIG------NEPFAVILADDLCISHDHPSVLKQ 144 (281)
T ss_dssp HHHHHHHHHHHHHH---CEEEEEECS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEEECTTSCCHHHH
T ss_pred chhhhhhhhccccC---ccEEEEecC-------CCCCcHHHHHHHHHHcC------CCCEEEEeCCeeccCccchHHHHH
Confidence 11 223222222 24699999999998884 4799999999999888 999
Q ss_pred HHHHHHhCCCcEEEEEEEcCCCCCCcceEEEECC--CC--cEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeee
Q 015713 232 FLQKHIDTKADITVSCVPMDDCRASDYGLMKIDR--SG--QIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASM 307 (402)
Q Consensus 232 ~l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD~--~g--~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~ 307 (402)
+++.|.+.++ .++++..++.+.+..||++.+|+ +| +|..|.|||..... .++++++
T Consensus 145 l~~~~~~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~ 204 (281)
T 3juk_A 145 MTSLYQKYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVI 204 (281)
T ss_dssp HHHHHHHHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEE
T ss_pred HHHHHHHcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEE
Confidence 9999988887 67777777555578999999986 78 99999999974321 1468999
Q ss_pred eEEEEehHHHHHHHHhhCCC--CCchhhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhccc
Q 015713 308 GVYLFRTDVLLNLLRSSYPL--SNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSL 374 (402)
Q Consensus 308 Giyvf~~~~l~~ll~~~~~~--~~d~~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~ 374 (402)
|+|+|++++|. .++...+. ....+.++++.++.+++|.+|.++|+|.|||||+||++|++.++..+
T Consensus 205 GiYi~~~~~l~-~l~~~~~~~~~e~~l~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 205 GRYILTPDIFE-ILSETKPGKNNEIQITDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp EEEEECTTHHH-HHHTCCCCGGGSCCHHHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHH-HHHhcCCCCCCceeHHHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhch
Confidence 99999999986 45543221 12235899999999899999999999999999999999999998655
No 3
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=9.8e-38 Score=317.16 Aligned_cols=282 Identities=36% Similarity=0.619 Sum_probs=217.4
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
|++|+|||||||.||||+|+|..+||+|+||+|+||||+|++++|.++|+++|+|+++++.+++.+|+...|.+.. .+
T Consensus 10 m~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~~~~--~~ 87 (420)
T 3brk_X 10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFFR--PE 87 (420)
T ss_dssp GGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSCCCC--GG
T ss_pred hhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhcccc--cc
Confidence 4568999999999999999999999999999999789999999999999999999999998999999875442210 00
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCccHHHHHHHHHhCCCcEEEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~di~~~l~~h~~~~aditi~~~~ 249 (402)
....+.++...+.. ....|+.||+++|++++.++++. ..++|+|++||+++..++.++++.|.++++++|+++.+
T Consensus 88 ~~~~v~i~~~~~~~--~~~~~~~Gt~~al~~a~~~l~~~---~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~ 162 (420)
T 3brk_X 88 RNESFDILPASQRV--SETQWYEGTADAVYQNIDIIEPY---APEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLE 162 (420)
T ss_dssp GTCEEEEECCC---------CCCCHHHHHHTTHHHHHHH---CCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEE
T ss_pred ccCCEEEeCccccc--cCCccccCCHHHHHHHHHHHHhc---CCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEee
Confidence 11235665543320 01246689999999999888531 24789999999999999999999999999999999888
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC--
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL-- 327 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~-- 327 (402)
.+.+.+..||++.+|++|+|..|.|||...... +.....+++++|+|+|++++|.++++...+.
T Consensus 163 ~~~~~~~~~g~v~~d~~g~v~~~~ekp~~~~~~--------------~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~ 228 (420)
T 3brk_X 163 VPRMEATGFGVMHVNEKDEIIDFIEKPADPPGI--------------PGNEGFALASMGIYVFHTKFLMEAVRRDAADPT 228 (420)
T ss_dssp EETTGGGGSEEEEECTTSBEEEEEESCSSCCCB--------------TTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC--
T ss_pred cCccccCcccEEEECCCCcEEEeEeCCCccccc--------------cccccceEEeeeeEEEeHHHHHHHHHHhcccCC
Confidence 644346789999999899999999998643210 0001247899999999999987777553331
Q ss_pred -CCchhhccHHhhhcCCcEEEEEE-----------cCeEEecCCHHHHHHHHhHhhcccCCccc--------cccccCCC
Q 015713 328 -SNDFGSEIIPASVKDHNVQAFLF-----------NDYWEDIGTIKSFFMPIWPSQNSLRSLNF--------MIPRHLSI 387 (402)
Q Consensus 328 -~~d~~~~ii~~li~~~~v~a~~~-----------~g~w~DIgtp~d~~~A~~~ll~~~~~~~~--------t~~~~~pp 387 (402)
..+|..++++.+++++++++|.+ +++|.|||||+||.+|++.++++.+..++ +.....||
T Consensus 229 ~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~~~~~~~~~~i~~~~~i~~~ 308 (420)
T 3brk_X 229 SSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPP 308 (420)
T ss_dssp --------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCSSCTTCCSSCCCCCCCCCCC
T ss_pred ccccchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCchhhcCCCCCceeeccccCCC
Confidence 23566799999998889999999 88999999999999999999987654432 56777888
Q ss_pred ccccc
Q 015713 388 RLLDS 392 (402)
Q Consensus 388 ~~~~~ 392 (402)
+.+..
T Consensus 309 ~~i~~ 313 (420)
T 3brk_X 309 AKFVH 313 (420)
T ss_dssp CEEEC
T ss_pred cEEec
Confidence 88864
No 4
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=9.5e-36 Score=285.44 Aligned_cols=237 Identities=23% Similarity=0.348 Sum_probs=194.7
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCC-chhHHHHHHhhccCCCCccc
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFN-SFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~-~~~i~~~l~~~y~~~~g~~~ 169 (402)
+.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++. .+.+.+++.. +..+
T Consensus 23 ~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~------~~~~ 95 (269)
T 4ecm_A 23 NAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGS------GQEF 95 (269)
T ss_dssp -CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGG
T ss_pred cCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhh------cccc
Confidence 458999999999999999999999999999999 9999999999999999999999975 3666666642 2233
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCccHHHHHHHHHhCCCcEEEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~di~~~l~~h~~~~aditi~~~~ 249 (402)
+.. +.++. +. +..||+++|+.++..++ .++|+|++||+++..++.++++.|.++++++++++.+
T Consensus 96 ~~~-i~~~~--~~-------~~~G~~~al~~a~~~~~------~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~ 159 (269)
T 4ecm_A 96 GVS-FTYRV--QD-------KAGGIAQALGLCEDFVG------NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQS 159 (269)
T ss_dssp TCE-EEEEE--CS-------SCCCHHHHHHTTHHHHT------TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEE
T ss_pred Cce-EEEee--CC-------ccCcHHHHHHHHHHhcC------CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEE
Confidence 322 33332 21 23699999999988874 4899999999999999999999999999999999988
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC--
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL-- 327 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~-- 327 (402)
.++ +..||++..| +|+|+.|.|||..+. .+++++|+|+|++++|. .++...+.
T Consensus 160 ~~~--~~~~g~v~~d-~g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~~ 214 (269)
T 4ecm_A 160 VDD--PERFGVANIQ-NRKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSAR 214 (269)
T ss_dssp CSC--GGGSEEEEEE-TTEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCTT
T ss_pred CCC--CCCceEEEEc-CCEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCCC
Confidence 865 6789999987 599999999985432 47899999999999885 44433221
Q ss_pred CCchhhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhcccC
Q 015713 328 SNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSLR 375 (402)
Q Consensus 328 ~~d~~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~~ 375 (402)
..-++.++++.++.++++.++.++++|.|||||+||.+|++.+++...
T Consensus 215 ge~~l~d~l~~l~~~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~~ 262 (269)
T 4ecm_A 215 GELEITDINNWYLKRGVLTYNEMSGWWTDAGTHVSLQRANALARDINF 262 (269)
T ss_dssp SCBCHHHHHHHHHHTTCEEEEECCSCEEECSSHHHHHHHHHHTTTCCC
T ss_pred CeeeHHHHHHHHHHcCCEEEEEeCCEEEeCCCHHHHHHHHHHHHhccc
Confidence 122358999999999999999999999999999999999999887654
No 5
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=6.4e-35 Score=283.84 Aligned_cols=246 Identities=22% Similarity=0.297 Sum_probs=191.9
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCC-----
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGN----- 165 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~----- 165 (402)
+.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+...|.+.+
T Consensus 7 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 85 (302)
T 2e3d_A 7 KVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKR 85 (302)
T ss_dssp SCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC--
T ss_pred cccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhhhc
Confidence 458999999999999999999999999999999 99999999999999999999999988999888854221000
Q ss_pred C-c----------ccCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCc-------
Q 015713 166 G-V----------NFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRM------- 227 (402)
Q Consensus 166 g-~----------~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~------- 227 (402)
+ . .++. .+.++. +. +..||+++|+++..++. .++|+|++||++++.
T Consensus 86 ~~~~~l~~~~~~~~~~~-~i~~~~--~~-------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~~~~ 149 (302)
T 2e3d_A 86 VKRQLLDEVQSICPPHV-TIMQVR--QG-------LAKGLGHAVLCAHPVVG------DEPVAVILPDVILDEYESDLSQ 149 (302)
T ss_dssp --CHHHHHHHHTSCTTC-EEEEEE--CS-------SCCCHHHHHHHTHHHHC------SSCEEEECTTEEECTTSSCTTT
T ss_pred cchhhhhhhhhccccCc-ceEEee--CC-------ccCCHHHHHHHHHHHcC------CCcEEEEcCCccccCccccchH
Confidence 0 0 0111 133333 21 24699999999998873 379999999998862
Q ss_pred -cHHHHHHHHHhCCCcEEEEEEEcCCCCCCcceEEEEC----CCC---cEEEEEecCCCCCCCCcccccccccCCCCCCC
Q 015713 228 -DYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKID----RSG---QIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAV 299 (402)
Q Consensus 228 -di~~~l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD----~~g---~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~ 299 (402)
++.++++.|.+.++ +++++.+..+ +..||++.++ ++| +|..|.|||.....
T Consensus 150 ~~l~~l~~~~~~~~~-~~i~~~~~~~--~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~------------------ 208 (302)
T 2e3d_A 150 DNLAEMIRRFDETGH-SQIMVEPVAD--VTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA------------------ 208 (302)
T ss_dssp STHHHHHHHHHHHCC-EEEEEEECSC--GGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC------------------
T ss_pred HHHHHHHHHHHhcCC-cEEEEEEccC--CCCccEEEecccccCCCCceeEEEEEECCCCCcc------------------
Confidence 79999999988777 7777777643 6789999874 567 89999999864321
Q ss_pred CCCceeeeeEEEEehHHHHHHHHhhCCC--CCchhhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhcccCC
Q 015713 300 KFPYIASMGVYLFRTDVLLNLLRSSYPL--SNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSLRS 376 (402)
Q Consensus 300 ~~~~~~~~Giyvf~~~~l~~ll~~~~~~--~~d~~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~~~ 376 (402)
..+++++|+|+|++++|. .++...+. ...++.++++.+++++++.+|.++++|.|||||++|.+|++.++.+.+.
T Consensus 209 -~~~~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~~~~ 285 (302)
T 2e3d_A 209 -PSNLAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNT 285 (302)
T ss_dssp -SCSEEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHHHCTT
T ss_pred -ccceEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhcCcc
Confidence 147899999999999885 44443332 1223578899988878999999999999999999999999777655543
No 6
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=100.00 E-value=9.9e-35 Score=275.14 Aligned_cols=246 Identities=21% Similarity=0.304 Sum_probs=180.6
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCccc--
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNF-- 169 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~-- 169 (402)
+|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+.+.+|+...+..+.+..+
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHM 80 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccc
Confidence 48899999999999999999999999999999 999999999999999999999999999999988643100001110
Q ss_pred CCCcEEEEecccCCCc---CCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCccHHHHHHHHHhCCCcEEEE
Q 015713 170 GDGFVEVLAATQTPGE---AGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVS 246 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~---~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~di~~~l~~h~~~~aditi~ 246 (402)
+.+.+.++.....+.+ .......||+++|+.++.+++ ..++|++++||+++..++.++++.|.+.++++|+.
T Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~-----~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~ 155 (259)
T 1tzf_A 81 AENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVK-----DDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLT 155 (259)
T ss_dssp GGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTT-----TSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEE
T ss_pred cccceeeeeccccccceeeeecccccCcHHHHHHHHHhcC-----CCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEE
Confidence 0001222211000000 000113699999999887663 24789999999999999999999998888888775
Q ss_pred EEEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCC
Q 015713 247 CVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP 326 (402)
Q Consensus 247 ~~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~ 326 (402)
... . +..||++.+| +|+|..|.|||... .+++++|+|+|++++|. .++.
T Consensus 156 ~~~--~--~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~-~l~~--- 204 (259)
T 1tzf_A 156 ATF--P--PGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVID-LIDN--- 204 (259)
T ss_dssp EEC--C--CCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGG-GCCS---
T ss_pred Eec--C--CCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHH-hhcc---
Confidence 432 2 5789999998 89999999998642 25789999999999884 3321
Q ss_pred CCCchhhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhccc
Q 015713 327 LSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSL 374 (402)
Q Consensus 327 ~~~d~~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~ 374 (402)
...++..++++.+++++++.++.++++|.|||||+||.+|++.+..+.
T Consensus 205 ~~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~~ 252 (259)
T 1tzf_A 205 DATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEKGK 252 (259)
T ss_dssp TTCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhcCC
Confidence 123455788999888889999999999999999999999999988655
No 7
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=7.7e-35 Score=282.82 Aligned_cols=249 Identities=16% Similarity=0.193 Sum_probs=175.6
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCC-----
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLG----- 164 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~----- 164 (402)
...|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+...|.+.
T Consensus 12 ~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~ 90 (297)
T 2ux8_A 12 KPLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAA 90 (297)
T ss_dssp CCCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHT
T ss_pred cCccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhh
Confidence 4558999999999999999999999999999999 9999999999999999999999999888988875321000
Q ss_pred CC---------cccCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCC---ccHHHH
Q 015713 165 NG---------VNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYR---MDYTEF 232 (402)
Q Consensus 165 ~g---------~~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~---~di~~~ 232 (402)
.+ ..++. .+.++... +..||+++|++++.++. .++|+|++||++++ .++.++
T Consensus 91 ~~~~~~~~~~~~~~g~-~i~~~~~~---------~~~Gt~~al~~a~~~~~------~~~~lv~~~D~~~~~~~~~l~~l 154 (297)
T 2ux8_A 91 RGKSLDVLDGTRLKPG-NIAYVRQQ---------EPMGLGHAVWCARDIVG------DEPFAVLLPDDFMFGQPGCLKQM 154 (297)
T ss_dssp TTCCGGGGTTSCCSTT-SEEEEECC---------SCCCHHHHHHTTHHHHC------SSCEEEECTTEEEESSSCHHHHH
T ss_pred ccchhhhhhhcccCCC-ceEEEeCC---------CCCChHHHHHHHHHHcC------CCcEEEEeCCeecCCChHHHHHH
Confidence 00 00121 24444321 24699999999988873 48999999999887 578999
Q ss_pred HHHHHhCCCcEEEEEEEcCCCCCCcceEEEECC--CC--cEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeee
Q 015713 233 LQKHIDTKADITVSCVPMDDCRASDYGLMKIDR--SG--QIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMG 308 (402)
Q Consensus 233 l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD~--~g--~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~G 308 (402)
++.|.+.++ .++++.+.+...+..||++.+|+ +| +|..|.|||..... ..+++++|
T Consensus 155 ~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~G 214 (297)
T 2ux8_A 155 VDAYNKVGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVIG 214 (297)
T ss_dssp HHHHHHHCS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEEE
T ss_pred HHHHHhcCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEEE
Confidence 999988775 56777665433467899887763 55 89999999863211 13678999
Q ss_pred EEEEehHHHHHHHHhhCCC--CCchhhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhcccCC
Q 015713 309 VYLFRTDVLLNLLRSSYPL--SNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSLRS 376 (402)
Q Consensus 309 iyvf~~~~l~~ll~~~~~~--~~d~~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~~~ 376 (402)
+|+|++++|. .++...+. ..-++.++++.++++++|.++.++++|.|||||+||.+|++.++...+.
T Consensus 215 iyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~~~ 283 (297)
T 2ux8_A 215 RYILQPEVMR-ILENQGKGAGGEIQLTDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSRPD 283 (297)
T ss_dssp EEEECTHHHH-HHHHTC--------CCTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHHHHCTT
T ss_pred EEEECHHHHH-HHHhhCCCCCCeeEHHHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHHhcChh
Confidence 9999999875 44443322 1123478899998888999999999999999999999999888876653
No 8
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.9e-34 Score=279.40 Aligned_cols=257 Identities=15% Similarity=0.194 Sum_probs=189.9
Q ss_pred CCCCeeEEEEcCCCCCcCCCCCCCCCccceecC--CcchHHHHHHHHhHhCCCCeEEEEccCCc-hhHHHHHHhhccCCC
Q 015713 89 DPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIG--GNYRLIDIPMSNCINSGFNKIFIMTQFNS-FSLNRHLARSYNLGN 165 (402)
Q Consensus 89 ~~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIg--G~~pLId~~i~~l~~~GI~~IiVv~~~~~-~~i~~~l~~~y~~~~ 165 (402)
.|++|.+||||||.||||+| ||+|+||| |+ |||+|+++++.++|+++|+|++++.. +++.+|+...+.
T Consensus 2 ~~m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~--- 72 (303)
T 3pnn_A 2 NAMKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYE--- 72 (303)
T ss_dssp -CCCCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHT---
T ss_pred CCCceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhc---
Confidence 36778999999999999988 69999994 88 99999999999999999999999985 889988875431
Q ss_pred CcccCCCcEEEEecccC---CC---cCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHh
Q 015713 166 GVNFGDGFVEVLAATQT---PG---EAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHID 238 (402)
Q Consensus 166 g~~~~~~~V~vl~~~q~---~~---~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~ 238 (402)
++. .+.++..... .+ .....+++||++||+++..++ .++|+|++||++++.+ +.++++.|.+
T Consensus 73 ---~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-------~~~~lV~~gD~l~~~~~~~~l~~~~~~ 141 (303)
T 3pnn_A 73 ---GRI-PVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-------REPFAVINADDFYGRNGFEVLARKLMT 141 (303)
T ss_dssp ---TTS-CEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-------CSCEEEEESSCBCCHHHHHHHHHHHHT
T ss_pred ---cCC-cEEEEecccccccccccccccccccCCcHHHHHHHHHhc-------CCCEEEEECCeecCHHHHHHHHHHHHH
Confidence 111 1444432210 00 000124579999999997665 3899999999999876 8999999976
Q ss_pred ---CCCcEEEEEEEcCCCCCCcc-----eEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCC----CCCceee
Q 015713 239 ---TKADITVSCVPMDDCRASDY-----GLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAV----KFPYIAS 306 (402)
Q Consensus 239 ---~~aditi~~~~~~~~~~~~~-----g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~----~~~~~~~ 306 (402)
.++++++++.++++. .++| |++.+|++|+|++|.|||........ +....++.. ..+++++
T Consensus 142 ~~~~~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~------~~~~~~~g~~~~~~~~~~i~ 214 (303)
T 3pnn_A 142 LEGKQGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGT------ISFRDETGKICTLAEDAPVS 214 (303)
T ss_dssp TTTCSSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTE------EEEECTTSCEEEECTTCEEE
T ss_pred hccccCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCcccccc------ccccccccccccCCCCCEEE
Confidence 678899999888652 1455 68899989999999999864210000 000000000 1247899
Q ss_pred eeEEEEehHHHHHHHH-------hhC--CCCCchhhccHHhhhcCC--cEEEEEEcCeEEecCCHHHHHHHHhHhhc
Q 015713 307 MGVYLFRTDVLLNLLR-------SSY--PLSNDFGSEIIPASVKDH--NVQAFLFNDYWEDIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 307 ~Giyvf~~~~l~~ll~-------~~~--~~~~d~~~~ii~~li~~~--~v~a~~~~g~w~DIgtp~d~~~A~~~ll~ 372 (402)
+|+|+|++++|..+.+ +.. .....++.++++.++.++ +|.+|.++|+|+|||||+||.+|++.+.+
T Consensus 215 ~GiY~f~~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 215 MNMWGFTPDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred EEEEEECHHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 9999999999875432 111 122345789999999887 79999999999999999999999998764
No 9
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=1.2e-33 Score=278.22 Aligned_cols=251 Identities=20% Similarity=0.233 Sum_probs=189.5
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCC----C
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLG----N 165 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~----~ 165 (402)
++.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.+|+...+.+. .
T Consensus 10 ~~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 10 NAVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLME 88 (323)
T ss_dssp --CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHH
T ss_pred hcceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhc
Confidence 3458999999999999999999999999999999 9999999999999999999999998888887764211000 0
Q ss_pred -C----------cccCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCC--ccHHHH
Q 015713 166 -G----------VNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYR--MDYTEF 232 (402)
Q Consensus 166 -g----------~~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~--~di~~~ 232 (402)
+ ..++. .+.++. +. +..||+++|++++.++.+ ..+.|+|++||++++ .++.++
T Consensus 89 ~~~~~~~~~~~~~~~g~-~i~~~~--~~-------~~~Gt~~al~~a~~~l~~----~~d~~lv~~~D~~~~~~~~l~~l 154 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLI-KAVPVT--QD-------KPLGLGHAVGLAESVLDD----DEDVVAVMLPDDLVLPTGVMERM 154 (323)
T ss_dssp TTCHHHHHHTTHHHHHC-EEEEEE--CS-------SCCCHHHHHHTTGGGSCS----SCCEEEEECTTEEEESSCHHHHH
T ss_pred cchhhhhhhhhccccCc-ceEEEe--CC-------ccCCcHHHHHHHHHHhcC----CCCeEEEEeCCcccCchHHHHHH
Confidence 0 00111 133333 21 236999999998766631 123399999999886 578999
Q ss_pred HHHHHhCCCcEEEEEEEcCCCCCCcceEEEEC----CCC--cEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceee
Q 015713 233 LQKHIDTKADITVSCVPMDDCRASDYGLMKID----RSG--QIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIAS 306 (402)
Q Consensus 233 l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD----~~g--~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~ 306 (402)
++.|.+.++ .++++.+.+.+....||++.+| ++| +|..|.|||..... ..++++
T Consensus 155 ~~~~~~~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~~ 214 (323)
T 2pa4_A 155 AQVRAEFGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLAA 214 (323)
T ss_dssp HHHHHTTCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEEE
T ss_pred HHHHHhcCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEEE
Confidence 999988775 5677777643346789999886 554 99999999864321 147899
Q ss_pred eeEEEEehHHHHHHHHhhCCCC--CchhhccHHhhhcC-CcEEEEEEcCeEEecCCHHHHHHHHhHhhcccCC
Q 015713 307 MGVYLFRTDVLLNLLRSSYPLS--NDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSLRS 376 (402)
Q Consensus 307 ~Giyvf~~~~l~~ll~~~~~~~--~d~~~~ii~~li~~-~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~~~ 376 (402)
+|+|+|++++|..+ +...+.. .-++.++++.++++ .+|.++.++++|.|||||+||.+|++.++.+.+.
T Consensus 215 ~GiY~~~~~~~~~l-~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~~~ 286 (323)
T 2pa4_A 215 TGRYLLDRKIFDAL-RRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSHPV 286 (323)
T ss_dssp EEEEEEETHHHHHH-HHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTCTT
T ss_pred EEEEEECHHHHHHH-HhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcChh
Confidence 99999999988644 4433221 12347899999987 6899999999999999999999999888866553
No 10
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=100.00 E-value=5.7e-34 Score=271.79 Aligned_cols=230 Identities=13% Similarity=0.139 Sum_probs=173.2
Q ss_pred EEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHh-CCCCeEEEEccCCchhHHHHHHhhccCCCCcccCCCc
Q 015713 95 AIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCIN-SGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGF 173 (402)
Q Consensus 95 AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~-~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~~ 173 (402)
+||||||.||||+|+|..+||||+||+|+ |||+|++++|.+ +|+++|+|++++..+ +.+++.+... .++...
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~-----~~~~~~ 74 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKAT-----QLGIKQ 74 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHH-----HHTCSS
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHH-----HcCCCC
Confidence 79999999999999999999999999999 999999999999 799999999999876 5566654320 112111
Q ss_pred EEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccC-CccHHHHHHHHHhCCCcEEEEEEEcCC
Q 015713 174 VEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLY-RMDYTEFLQKHIDTKADITVSCVPMDD 252 (402)
Q Consensus 174 V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~-~~di~~~l~~h~~~~aditi~~~~~~~ 252 (402)
+.++.. |. +.+||++||++++.++........++|+|++||+++ +.++.++ ..++++++++..+++
T Consensus 75 ~~~~~~-~~-------~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~ 141 (255)
T 4evw_A 75 FYIAEL-HT-------ETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGG 141 (255)
T ss_dssp EEEEEE-SS-------CCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCS
T ss_pred ceEEEe-CC-------CCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCC
Confidence 222211 21 246999999999998831000135789999999988 4555443 246678899988864
Q ss_pred CCCCcceEEEECCCC--cEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehH-HHHHHHH----hhC
Q 015713 253 CRASDYGLMKIDRSG--QIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTD-VLLNLLR----SSY 325 (402)
Q Consensus 253 ~~~~~~g~v~iD~~g--~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~-~l~~ll~----~~~ 325 (402)
..||++..|++| +|++|.||+.. +.++++|+|+|++. .|.+.+. ...
T Consensus 142 ---p~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~~~ 195 (255)
T 4evw_A 142 ---DNWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVARPS 195 (255)
T ss_dssp ---SCSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTSCG
T ss_pred ---CceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhccc
Confidence 399999999888 99999999432 35899999999986 3433332 211
Q ss_pred C---CCCchhhccHHhhhcCC-cEEEEEEc-CeEEecCCHHHHHHHHhHh
Q 015713 326 P---LSNDFGSEIIPASVKDH-NVQAFLFN-DYWEDIGTIKSFFMPIWPS 370 (402)
Q Consensus 326 ~---~~~d~~~~ii~~li~~~-~v~a~~~~-g~w~DIgtp~d~~~A~~~l 370 (402)
+ ....+++++++.+++++ +|.++.++ ++|+|||||++|.++++.-
T Consensus 196 ~~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~~ 245 (255)
T 4evw_A 196 QEWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQP 245 (255)
T ss_dssp GGCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC-
T ss_pred ccccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhcC
Confidence 1 23346789999999876 69999985 8999999999999997643
No 11
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=100.00 E-value=1.5e-32 Score=267.14 Aligned_cols=236 Identities=25% Similarity=0.361 Sum_probs=187.6
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEc-cCCchhHHHHHHhhccCCCCcccC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMT-QFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~-~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
+|++||||||.||||+|+|..+||+|+||+|+ |||+|+++.+..+||++|+|++ +++.+.+.+++.. +..|+
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 74 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGD------GSNWG 74 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhc------ccccC
Confidence 58999999999999999999999999999999 9999999999999999999877 4566777777642 22344
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccC-CccHHHHHHHHHhCCCcEEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLY-RMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~-~~di~~~l~~h~~~~aditi~~~~ 249 (402)
.. +.++. |.. +.|++++++.+..++. .++++++.||+++ ..++.++++.|.+.+.++++.+.+
T Consensus 75 ~~-i~~~~--~~~-------~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 138 (293)
T 1fxo_A 75 LD-LQYAV--QPS-------PDGLAQAFLIGESFIG------NDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYH 138 (293)
T ss_dssp CE-EEEEE--CSS-------CCCGGGHHHHTHHHHT------TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEee--CCC-------CCCHHHHHHHHHHHhC------CCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEE
Confidence 21 33332 321 3699999999988874 3788888899955 578999999998777788888888
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC-C
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL-S 328 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~-~ 328 (402)
+.+ +..||++.+|++|+|..|.|||..+. ++++++|+|+|+++++..+ +...+. .
T Consensus 139 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~~-~~~~~~~~ 194 (293)
T 1fxo_A 139 VLD--PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVDIA-RDLKPSPR 194 (293)
T ss_dssp CSC--GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHHHH-HHCCCCTT
T ss_pred CCC--cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHHHH-HhcCcccC
Confidence 765 67899999999999999999985332 3689999999999998644 333222 1
Q ss_pred C-chhhccHHhhhcCCcEEEEEEc-Ce-EEecCCHHHHHHHHhHhhccc
Q 015713 329 N-DFGSEIIPASVKDHNVQAFLFN-DY-WEDIGTIKSFFMPIWPSQNSL 374 (402)
Q Consensus 329 ~-d~~~~ii~~li~~~~v~a~~~~-g~-w~DIgtp~d~~~A~~~ll~~~ 374 (402)
. -...++++.+++.+.+.++... || |.|||||+||.+|+..+..-+
T Consensus 195 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~~~ 243 (293)
T 1fxo_A 195 GELEITDVNRAYLERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIATLE 243 (293)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTSEEEECCSHHHHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHhcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHHHHH
Confidence 2 2347888988888888888775 75 999999999999998876443
No 12
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=100.00 E-value=4.1e-32 Score=264.40 Aligned_cols=236 Identities=22% Similarity=0.344 Sum_probs=187.1
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEcc-CCchhHHHHHHhhccCCCCcccC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQ-FNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~-~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
.|++||||||.||||+|+|..+||+|+||+|+ |||+|+++.+..+||++|+|+++ ++.+.+.+++.. +..++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~------g~~~g 75 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGD------GSQFG 75 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhh------ccccC
Confidence 37999999999999999999999999999999 99999999999999999999886 667777777642 22334
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccC-CccHHHHHHHHHhCCCcEEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLY-RMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~-~~di~~~l~~h~~~~aditi~~~~ 249 (402)
.. +.++. |.. +.|++++++.+..++. .++++++.||+++ ..++.++++.|.+.+.++++.+.+
T Consensus 76 ~~-i~~~~--~~~-------~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (295)
T 1lvw_A 76 VR-FSYRV--QEE-------PRGIADAFIVGKDFIG------DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYY 139 (295)
T ss_dssp SE-EEEEE--CSS-------CCCGGGHHHHTHHHHT------TSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEE
T ss_pred ce-EEEee--CCC-------CCChHHHHHHHHHHhC------CCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEE
Confidence 21 33332 221 3699999999988874 3678888899965 678999999998777788888888
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC-C
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL-S 328 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~-~ 328 (402)
+.+ +..||+|.+|++|+|..|.|||..+. ++++++|+|+|+++++..+ ....+. .
T Consensus 140 v~d--p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~~~-~~~~~~~~ 195 (295)
T 1lvw_A 140 VRD--PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVEIA-RRIEPSDR 195 (295)
T ss_dssp CSC--CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHHHH-HHCCCCTT
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHHHH-HhcCCccc
Confidence 765 56899999999999999999985332 3578999999999998654 333222 1
Q ss_pred C-chhhccHHhhhcCCcEEEEEEc-Ce-EEecCCHHHHHHHHhHhhccc
Q 015713 329 N-DFGSEIIPASVKDHNVQAFLFN-DY-WEDIGTIKSFFMPIWPSQNSL 374 (402)
Q Consensus 329 ~-d~~~~ii~~li~~~~v~a~~~~-g~-w~DIgtp~d~~~A~~~ll~~~ 374 (402)
. ...+++++.+++.+.+.++.+. ++ |.|||||+||.+|+..+..-+
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~~~ 244 (295)
T 1lvw_A 196 GELEITSVNEEYLRMGKLRVELMGRGMAWLDTGTHDGLLEASSFIETIQ 244 (295)
T ss_dssp SCCCHHHHHHHHHHTTCEEEEEECTTCEECCCSSHHHHHHHHHHHHHHH
T ss_pred CceeHHHHHHHHHHcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHHHHH
Confidence 1 2347888888888888888775 75 999999999999999876433
No 13
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=100.00 E-value=1.8e-32 Score=267.14 Aligned_cols=236 Identities=25% Similarity=0.344 Sum_probs=186.9
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEcc-CCchhHHHHHHhhccCCCCcccC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQ-FNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~-~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
.|++||||||.||||+|+|..+||+|+||+|+ |||+|+++.+..+||++|+|+++ ++.+.+.+++.. +..++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~------g~~~g 75 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGD------GSEFG 75 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTT------SGGGT
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhc------ccccC
Confidence 37999999999999999999999999999999 99999999999999999999886 666777776642 22334
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccC-CccHHHHHHHHHhCCCcEEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLY-RMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~-~~di~~~l~~h~~~~aditi~~~~ 249 (402)
.. +.++. |. .+.|++++++.+..++. .++++++.||+++ ..++.++++.|.+.+.++++.+.+
T Consensus 76 ~~-i~~~~--~~-------~~~G~~~al~~a~~~i~------~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~ 139 (296)
T 1mc3_A 76 IQ-LEYAE--QP-------SPDGLAQAFIIGETFLN------GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQ 139 (296)
T ss_dssp CE-EEEEE--CS-------SCCCSTHHHHHTHHHHT------TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEE
T ss_pred ce-EEEec--cC-------CCCCHHHHHHHHHHHhC------CCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEE
Confidence 21 33332 22 13699999999988874 3678888899854 678999999997777788888888
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC-C
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL-S 328 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~-~ 328 (402)
+.+ +..||+|.+|++|+|..|.|||..+. ++++++|+|+|+++++.. ++...+. .
T Consensus 140 v~d--p~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~~-~~~~~~~~~ 195 (296)
T 1mc3_A 140 VMD--PERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVEY-AKQVKPSER 195 (296)
T ss_dssp CSC--CSSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHHH-HHSCCCCSS
T ss_pred CCC--cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHHH-HHhcCcccc
Confidence 766 66899999998999999999985432 357899999999999864 4443332 1
Q ss_pred C-chhhccHHhhhcCCcEEEEEEc-Ce-EEecCCHHHHHHHHhHhhccc
Q 015713 329 N-DFGSEIIPASVKDHNVQAFLFN-DY-WEDIGTIKSFFMPIWPSQNSL 374 (402)
Q Consensus 329 ~-d~~~~ii~~li~~~~v~a~~~~-g~-w~DIgtp~d~~~A~~~ll~~~ 374 (402)
. ..+.++++.+++++.+.++.+. ++ |.|||||+||.+|+..+..-+
T Consensus 196 ge~~~td~~~~~l~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~~~ 244 (296)
T 1mc3_A 196 GELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTVE 244 (296)
T ss_dssp SSCCHHHHHHHHHHTTCEEEEECCTTCEEEECCSHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHhcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 1 2347888888888888888775 75 999999999999999877544
No 14
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.98 E-value=8.2e-32 Score=263.31 Aligned_cols=243 Identities=17% Similarity=0.326 Sum_probs=153.9
Q ss_pred CeeEEEEcCCCCCcCCCCCC-CCCccceec-CCcchHHHHHHHHhHhCCCCeEEEEccCCc-hhHHHHHHhhccCCCCcc
Q 015713 92 NVAAIILGGGAGTRLFPLTN-RRAKPAVPI-GGNYRLIDIPMSNCINSGFNKIFIMTQFNS-FSLNRHLARSYNLGNGVN 168 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~-~~PKpLvpI-gG~~pLId~~i~~l~~~GI~~IiVv~~~~~-~~i~~~l~~~y~~~~g~~ 168 (402)
+|+|||||||.||||+|+|. .+||||+|| +|+ |||+|+++++.++ +++|+|++++.. +.+.+++...
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~-------- 73 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE-------- 73 (308)
T ss_dssp CEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT--------
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh--------
Confidence 58999999999999999997 899999999 588 9999999999999 999999999874 4566665321
Q ss_pred cCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccC-Ccc-HHHHHHH---HHhCCCcE
Q 015713 169 FGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLY-RMD-YTEFLQK---HIDTKADI 243 (402)
Q Consensus 169 ~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~-~~d-i~~~l~~---h~~~~adi 243 (402)
++...+.++... +..||+++|+.+..++. ..+.|+|++||+++ +.+ +.++++. |.+.++++
T Consensus 74 ~~~~~~~~i~~~---------~~~gt~~al~~a~~~l~-----~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (308)
T 2qh5_A 74 IKNKSVGFLLES---------LSKNTANAIALSALMSD-----KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLV 139 (308)
T ss_dssp CSSCEEEEEEES---------SCCCHHHHHHHHHHTSC-----TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEE
T ss_pred hCCCccEEEeCC---------CCCChHHHHHHHHHHhC-----CCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEE
Confidence 222124444322 13699999999987662 23569999999988 666 8899887 77778888
Q ss_pred EEEEEEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHh
Q 015713 244 TVSCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS 323 (402)
Q Consensus 244 ti~~~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~ 323 (402)
|+++.+..+ ...||++.+|++|+|..|.|||........ + ....+++++|+|+|++++|.+.+++
T Consensus 140 t~~~~~~~~--~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~-~------------~~g~~~~n~Giy~~~~~~ll~~l~~ 204 (308)
T 2qh5_A 140 TFGVSIDKP--NTEFGYIESPNGLDVKRFIEKPSLDKAIEF-Q------------KSGGFYFNSGMFVFQAGVFLDELKK 204 (308)
T ss_dssp EEEEECSSC--CTTSEEEECSSSSBCSEEEESCCHHHHHHH-H------------HHCCEEEEEEEEEEEHHHHHHHHHH
T ss_pred EEEEecCCC--CCCceEEEECCCCEEEEEEECCChHHHHHH-h------------hcCCeEEEeEEEEEEHHHHHHHHHH
Confidence 888887654 578999998878999999999864210000 0 0014789999999999987555443
Q ss_pred hCCC------------C------Cchh---hccHH--------h-hhcC-CcEEEEEEcCeEEecCCHHHHHHHHhHhhc
Q 015713 324 SYPL------------S------NDFG---SEIIP--------A-SVKD-HNVQAFLFNDYWEDIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 324 ~~~~------------~------~d~~---~~ii~--------~-li~~-~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~ 372 (402)
..+. . ..+. .++++ . ++.+ .+|.++.++++|.|||||++|.+++.....
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~~~ 284 (308)
T 2qh5_A 205 HAPTILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANEPK 284 (308)
T ss_dssp HCHHHHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC----------------
T ss_pred hChHHHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcCcC
Confidence 2211 0 1111 24444 2 4554 689999999999999999999999886544
Q ss_pred c
Q 015713 373 S 373 (402)
Q Consensus 373 ~ 373 (402)
+
T Consensus 285 ~ 285 (308)
T 2qh5_A 285 E 285 (308)
T ss_dssp -
T ss_pred C
Confidence 3
No 15
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.97 E-value=4.4e-30 Score=266.76 Aligned_cols=240 Identities=19% Similarity=0.223 Sum_probs=187.2
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
+.++++||||||.||||+|+| ||||+||+|+ |||+|+|++|.++|+++|+|+++|..+++.+|+.+.. ..+
T Consensus 10 ~~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~-----~~~ 80 (501)
T 3st8_A 10 PGDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELA-----DTL 80 (501)
T ss_dssp --CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHH-----HHH
T ss_pred CCCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHH-----Hhc
Confidence 456889999999999999986 9999999999 9999999999999999999999999999999997421 012
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSC 247 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~ 247 (402)
+. .+.++. |. +++|||+||+++++++.+ ...+.+++++||. ++. ..+.++++.|+..++++|+++
T Consensus 81 ~~-~i~~~~--q~-------~~lGTa~Av~~a~~~l~~---~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~ 147 (501)
T 3st8_A 81 GR-TIDVAL--QD-------RPLGTGHAVLCGLSALPD---DYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLT 147 (501)
T ss_dssp TS-CCEEEE--CS-------SCCCHHHHHHHHHTTSCT---TCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CC-cEEEEE--cC-------CCCCcHHHHHHHHHHhcc---ccccceeeecCcceeecHHHHHHHHHHHhhccccceEee
Confidence 22 144443 32 357999999999988852 2457899999998 444 457899999999999999999
Q ss_pred EEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC
Q 015713 248 VPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL 327 (402)
Q Consensus 248 ~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~ 327 (402)
.++++ +..||.+..|++|+|+.|.||+..+.. + ....++++|+|+|+++.|..++......
T Consensus 148 ~~~~d--p~~yG~i~~~~~g~v~~ivEk~~~~~~---------------~--~~i~~in~Giy~f~~~~l~~~l~~l~~~ 208 (501)
T 3st8_A 148 TTLDD--PFGYGRILRTQDHEVMAIVEQTDATPS---------------Q--REIREVNAGVYAFDIAALRSALSRLSSN 208 (501)
T ss_dssp EECSC--CTTSCEEEECTTCCEEEEECGGGCCHH---------------H--HHCCEEEEEEEEEEHHHHHHHHTTCCCC
T ss_pred eccCC--chhccccccccceeEEeeccccCCChh---------------h--ccceeeeceeeeecchhHHHhhhhhccc
Confidence 99876 899999999999999999999875421 0 1246899999999999998887654322
Q ss_pred ---CCchhhccHHhhhcCC-cEEEEEEcCeEEecC--CHHHHHHHHhHh
Q 015713 328 ---SNDFGSEIIPASVKDH-NVQAFLFNDYWEDIG--TIKSFFMPIWPS 370 (402)
Q Consensus 328 ---~~d~~~~ii~~li~~~-~v~a~~~~g~w~DIg--tp~d~~~A~~~l 370 (402)
...++.+++..+...+ .+.++..+++|...+ +...+.++...+
T Consensus 209 n~~~e~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~ 257 (501)
T 3st8_A 209 NAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASEL 257 (501)
T ss_dssp STTCSCCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHH
T ss_pred ccccccchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHh
Confidence 3446778888887765 677777777776655 445555544433
No 16
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.96 E-value=1.1e-29 Score=241.75 Aligned_cols=221 Identities=18% Similarity=0.252 Sum_probs=163.2
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
+|.|||||||.||||+|+|..+||+|+||+|+ |||+|+++++.++|+++|+|++++..+++.. +.+.| +
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~-~~~~~--------~- 93 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDY-LKEKY--------G- 93 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTH-HHHHH--------C-
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHH-HHHhC--------C-
Confidence 58899999999999999999999999999999 9999999999999999999999998877754 33333 2
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCccHHHHHHHHHhCCCcEEEEEEEcC
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDYTEFLQKHIDTKADITVSCVPMD 251 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~di~~~l~~h~~~~aditi~~~~~~ 251 (402)
+.++...+. ...|++++|+.+...+ ++++|++||+++..++ ++.+.+.++.+++ ...
T Consensus 94 --~~iv~~~~~-------~~~g~~~al~~a~~~~--------~~~lv~~~D~~~~~~~---~~~~~~~~~~~t~---~~~ 150 (254)
T 1jyk_A 94 --VRLVFNDKY-------ADYNNFYSLYLVKEEL--------ANSYVIDADNYLFKNM---FRNDLTRSTYFSV---YRE 150 (254)
T ss_dssp --CEEEECTTT-------TTSCTHHHHHTTGGGC--------TTEEEEETTEEESSCC---CCSCCCSEEEEEC---EES
T ss_pred --cEEEECCCc-------cCCCcHHHHHHHHHHC--------CCEEEEeCCcccCHHH---HHHHHhCCceEEE---Ecc
Confidence 445543321 1258999998876544 3589999999776553 2223333332332 222
Q ss_pred CCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHH---HHHHhhCCC-
Q 015713 252 DCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLL---NLLRSSYPL- 327 (402)
Q Consensus 252 ~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~---~ll~~~~~~- 327 (402)
+. ...|+++ +|++|+|+.|.|++. ..++++|+|+|+++.+. .+++.....
T Consensus 151 ~~-~~~~~v~-~d~~g~v~~~~e~~~------------------------~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~ 204 (254)
T 1jyk_A 151 DC-TNEWFLV-YGDDYKVQDIIVDSK------------------------AGRILSGVSFWDAPTAEKIVSFIDKAYVSG 204 (254)
T ss_dssp SC-SSCCEEE-ECTTCBEEEEECCCS------------------------SEEBCCSEEEECHHHHHHHHHHHHHHHTTT
T ss_pred cC-CCCeEEE-ECCCCeEEEEEECCC------------------------CCcEEEEEEEEcHHHHHHHHHHHHHHHhcC
Confidence 21 2368865 888899999999642 24788999999987443 333332221
Q ss_pred --CCchhhccHHhhhcCCcEEEEEEc-CeEEecCCHHHHHHHHhHhhc
Q 015713 328 --SNDFGSEIIPASVKDHNVQAFLFN-DYWEDIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 328 --~~d~~~~ii~~li~~~~v~a~~~~-g~w~DIgtp~d~~~A~~~ll~ 372 (402)
...+.+++++.+....++.++.++ ++|.+|||++||.+|++.+..
T Consensus 205 ~~~e~~~~d~~~~l~~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~~ 252 (254)
T 1jyk_A 205 EFVDLYWDNMVKDNIKELDVYVEELEGNSIYEIDSVQDYRKLEEILKN 252 (254)
T ss_dssp CCTTCCTTHHHHTTGGGCCEEEEECCTTSEEECCSHHHHHHHHHHHC-
T ss_pred CccccCHHHHHHHHHhhCCeEEEEecCCeEEEcCCHHHHHHHHHHhhh
Confidence 234567788888778899999987 799999999999999997754
No 17
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.96 E-value=6.4e-30 Score=253.27 Aligned_cols=233 Identities=20% Similarity=0.291 Sum_probs=169.5
Q ss_pred eeEEEEcCCCCCcCCCCC-CCCCccceecCC-cchHHHHHHHHhHhC-CCCeEEEEccCCc-hhHHHHHHhhccCCCCcc
Q 015713 93 VAAIILGGGAGTRLFPLT-NRRAKPAVPIGG-NYRLIDIPMSNCINS-GFNKIFIMTQFNS-FSLNRHLARSYNLGNGVN 168 (402)
Q Consensus 93 m~AIILAaG~GtRL~PlT-~~~PKpLvpIgG-~~pLId~~i~~l~~~-GI~~IiVv~~~~~-~~i~~~l~~~y~~~~g~~ 168 (402)
|.+||||||.||||+|+| ..+||+|+|++| + |||+|+++++..+ |+++|+|++++.. +.+.+++.. .
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~-pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~------~-- 72 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNK-SLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPE------L-- 72 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTB-CHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTT------S--
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCC-cHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhc------c--
Confidence 789999999999999999 789999999999 7 9999999999996 8999999999864 445555431 1
Q ss_pred cCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCc--cHH----HHHHHHHhCCCc
Q 015713 169 FGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRM--DYT----EFLQKHIDTKAD 242 (402)
Q Consensus 169 ~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~--di~----~~l~~h~~~~ad 242 (402)
+. ..++... +.+||++++..+...+. ..+.++|++||+++.. ++. .+++.|.+.++.
T Consensus 73 -~~--~~ii~e~---------~~~gta~ai~~a~~~~~-----~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~ 135 (336)
T 2x65_A 73 -PD--ENIIAEP---------MKKNTAPACFIGTKLAD-----DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGL 135 (336)
T ss_dssp -CG--GGEEEES---------SCCCHHHHHHHHHTTSC-----TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSE
T ss_pred -cc--ceEEeCC---------CCCCcHHHHHHHHHhhC-----CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCe
Confidence 10 1122211 13699999998875331 3467999999998754 444 445557665778
Q ss_pred EEEEEEEcCCCCCCcceEEEECCC-----CcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHH
Q 015713 243 ITVSCVPMDDCRASDYGLMKIDRS-----GQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVL 317 (402)
Q Consensus 243 iti~~~~~~~~~~~~~g~v~iD~~-----g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l 317 (402)
+|+.+.+... ...||+++.|++ ++|..|.|||.....+.. .....|++++|+|+|+++.|
T Consensus 136 vt~~i~p~~~--~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~-------------~~~g~y~~n~Giy~~~~~~l 200 (336)
T 2x65_A 136 FTFGIVPTRP--ETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKF-------------VESGRFLWNSGMFLWKAREF 200 (336)
T ss_dssp EEEEECCCSC--CSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHH-------------HHHTCEEEEEEEEEEEHHHH
T ss_pred EEEEeecccC--CCCceEEEECCccCCCccEEEEEEECCChHHHHHH-------------HhcCCeEEEeeeEEEEHHHH
Confidence 8888777654 468999998765 799999999874321000 00124789999999999987
Q ss_pred HHHHHhhCCC-----------CCchhhccHHh---------hhcC-CcEEEEEEcCeEEecCCHHHHHHH
Q 015713 318 LNLLRSSYPL-----------SNDFGSEIIPA---------SVKD-HNVQAFLFNDYWEDIGTIKSFFMP 366 (402)
Q Consensus 318 ~~ll~~~~~~-----------~~d~~~~ii~~---------li~~-~~v~a~~~~g~w~DIgtp~d~~~A 366 (402)
.+.++...+. ..+|+.++++. ++++ .++++++++++|.|||||++|.++
T Consensus 201 l~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 201 IEEVKVCEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HHHHHHHCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 5444432221 01344566665 3443 689999999999999999999999
No 18
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.96 E-value=1.2e-28 Score=252.71 Aligned_cols=231 Identities=19% Similarity=0.239 Sum_probs=184.5
Q ss_pred eeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCCC
Q 015713 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDG 172 (402)
Q Consensus 93 m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~ 172 (402)
-+|||||||.||||++ .+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++. .+
T Consensus 12 ~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~------~~------ 75 (468)
T 1hm9_A 12 NFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLA------GQ------ 75 (468)
T ss_dssp EEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSS------SS------
T ss_pred CcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhC------CC------
Confidence 4799999999999974 689999999999 9999999999999999999999998776655442 11
Q ss_pred cEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc--cCCccHHHHHHHHHhCCCcEEEEEEEc
Q 015713 173 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH--LYRMDYTEFLQKHIDTKADITVSCVPM 250 (402)
Q Consensus 173 ~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~--l~~~di~~~l~~h~~~~aditi~~~~~ 250 (402)
+.++... +..|++++|+.++..+++ ..++|++++||+ +...++.++++.|.+.++++++++.+.
T Consensus 76 -i~~v~~~---------~~~G~~~sl~~a~~~~~~----~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~ 141 (468)
T 1hm9_A 76 -TEFVTQS---------EQLGTGHAVMMTEPILEG----LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAET 141 (468)
T ss_dssp -SEEEECS---------SCCCHHHHHHTTHHHHTT----CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC
T ss_pred -cEEEeCC---------ccCChHHHHHHHHHHhcc----CCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEecc
Confidence 3444321 236999999999988741 258999999999 456789999999999899999988887
Q ss_pred CCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC---
Q 015713 251 DDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL--- 327 (402)
Q Consensus 251 ~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~--- 327 (402)
.+ +..||.+.+|++|+|..|.|||..... ....+++++|+|+|+++.|.+.++.....
T Consensus 142 ~~--~~~~g~v~~d~~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~ 202 (468)
T 1hm9_A 142 DN--PFGYGRIVRNDNAEVLRIVEQKDATDF-----------------EKQIKEINTGTYVFDNERLFEALKNINTNNAQ 202 (468)
T ss_dssp SC--CTTSCEEEECTTCCEEEEECTTTCCTT-----------------GGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTT
T ss_pred CC--CCceeEEEECCCCCEEEEEECCCCChH-----------------HhcCeEEEEEEEEEEHHHHHHHHHhhccccCC
Confidence 65 677999999989999999999753210 01247899999999999776666543322
Q ss_pred CCchhhccHHhhhcCC-cEEEEEEcCeEEecC--CHHHHHHHHhHhhc
Q 015713 328 SNDFGSEIIPASVKDH-NVQAFLFNDYWEDIG--TIKSFFMPIWPSQN 372 (402)
Q Consensus 328 ~~d~~~~ii~~li~~~-~v~a~~~~g~w~DIg--tp~d~~~A~~~ll~ 372 (402)
...++.++++.+++.+ ++++|.++|+|.|+| ||+||..|+..+..
T Consensus 203 ~~~~~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~ 250 (468)
T 1hm9_A 203 GEYYITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRR 250 (468)
T ss_dssp CSCCTTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHH
T ss_pred CeEEHHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHH
Confidence 2245689999998874 899999999998855 99999999987654
No 19
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.96 E-value=1.1e-28 Score=244.46 Aligned_cols=236 Identities=20% Similarity=0.298 Sum_probs=167.5
Q ss_pred CeeEEEEcCCCCCcCCCCC-CCCCccceecCC-cchHHHHHHHHhHhC-CCCeEEEEccCCc-hhHHHHHHhhccCCCCc
Q 015713 92 NVAAIILGGGAGTRLFPLT-NRRAKPAVPIGG-NYRLIDIPMSNCINS-GFNKIFIMTQFNS-FSLNRHLARSYNLGNGV 167 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT-~~~PKpLvpIgG-~~pLId~~i~~l~~~-GI~~IiVv~~~~~-~~i~~~l~~~y~~~~g~ 167 (402)
+|.+||||||.||||+|+| ..+||+|+||+| + |||+|+++++..+ |+++|+|++++.. +.+.++ ++.
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~-pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~------l~~-- 72 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGK-TLLEATLERLAPLVPPERTLLAVRRDQEAVARPY------ADG-- 72 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGC-BHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGG------CSS--
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCC-hHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHH------hcc--
Confidence 4899999999999999999 689999999999 6 9999999999998 8999999998754 222222 221
Q ss_pred ccCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCc--cHHHH----HHHHHhCCC
Q 015713 168 NFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRM--DYTEF----LQKHIDTKA 241 (402)
Q Consensus 168 ~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~--di~~~----l~~h~~~~a 241 (402)
..+ ++.+ +.+||+.++..+.. +... ...+.++|++||+++.. .+..+ ++.|.+ ++
T Consensus 73 ----~~~-i~e~----------~~~gta~ai~~a~~-l~~~--~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~ 133 (337)
T 2cu2_A 73 ----IRL-LLEP----------LGRDTAGAVLLGVA-EALK--EGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GF 133 (337)
T ss_dssp ----SEE-EEES----------SCCHHHHHHHHHHH-HHHH--HTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TC
T ss_pred ----Cce-EecC----------CCCCcHHHHHHHHH-Hhcc--CCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CC
Confidence 112 3321 13689999999887 5421 13578999999997753 34444 444544 67
Q ss_pred cEEEEEEEcCCCCCCcceEEEECCC----CcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHH
Q 015713 242 DITVSCVPMDDCRASDYGLMKIDRS----GQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVL 317 (402)
Q Consensus 242 diti~~~~~~~~~~~~~g~v~iD~~----g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l 317 (402)
.+|+.+.+... ...||+++.|++ ++|..|.|||.....+.+ + ... |++++|+|+|+++.|
T Consensus 134 ~vt~~i~p~~~--~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~------~-------~~g-~~~n~Giy~f~~~~l 197 (337)
T 2cu2_A 134 VVALGLRPTRP--ETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEY------I-------RKG-YVWNGGVFAFAPATM 197 (337)
T ss_dssp EEEEEECCSSC--CSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHH------H-------HTT-CEEEEEEEEECHHHH
T ss_pred eEEEeeccCCC--CCCceEEEECCcccccCeEEEEEeCCChHHHHHH------h-------hcC-CEEEEEEEEEeHHHH
Confidence 78888877654 568999998765 899999999874311000 0 001 789999999999988
Q ss_pred HHHHHhhCCCCC-ch--------hhccHHh---------hhcC-CcEEEEEEcCeEEecCCHHHHHHHHhHhh
Q 015713 318 LNLLRSSYPLSN-DF--------GSEIIPA---------SVKD-HNVQAFLFNDYWEDIGTIKSFFMPIWPSQ 371 (402)
Q Consensus 318 ~~ll~~~~~~~~-d~--------~~~ii~~---------li~~-~~v~a~~~~g~w~DIgtp~d~~~A~~~ll 371 (402)
.+.++...+... .+ ..+.++. ++++ .++++++++++|.|||||++|+++...-.
T Consensus 198 l~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~~d~ 270 (337)
T 2cu2_A 198 AELFRRHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFSQDP 270 (337)
T ss_dssp HHHHHHHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHTSCT
T ss_pred HHHHHHHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhhccc
Confidence 555544322100 00 1234444 3443 58999999999999999999999976443
No 20
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.96 E-value=2.7e-27 Score=224.95 Aligned_cols=238 Identities=16% Similarity=0.228 Sum_probs=172.1
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
++.|||||||.|||| | +|+|+||+|+ |||+|+++.+..+|+++|+|+++ .+.+.+++.+ + |
T Consensus 2 ~~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~-~--------g- 62 (252)
T 3oam_A 2 SFTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA-F--------G- 62 (252)
T ss_dssp CEEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-T--------T-
T ss_pred ceEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH-c--------C-
Confidence 578999999999999 3 7999999999 99999999999999999999995 5777777752 2 2
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cC-CccHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LY-RMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~-~~di~~~l~~h~~~~aditi~~~~ 249 (402)
+.++...+. ++.||++ +..+...+. ....+.|++++||. ++ ..++.++++.|.+.++++++++.+
T Consensus 63 --~~v~~~~~~-------~~~Gt~~-~~~~~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (252)
T 3oam_A 63 --GVVCMTSPN-------HQSGTER-LAEVVAKMA---IPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVE 129 (252)
T ss_dssp --CEEEECCTT-------CCSHHHH-HHHHHHHTT---CCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEE
T ss_pred --CEEEEcCCC-------CCCcHHH-HHHHHHhcC---cCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeee
Confidence 334332222 2458888 455555542 01358899999999 44 467899999998888899999998
Q ss_pred cCCCCCCcc-----eEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCC-CCCCceeeeeEEEEehHHHHHHHHh
Q 015713 250 MDDCRASDY-----GLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDA-VKFPYIASMGVYLFRTDVLLNLLRS 323 (402)
Q Consensus 250 ~~~~~~~~~-----g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a-~~~~~~~~~Giyvf~~~~l~~ll~~ 323 (402)
+++ +.+| |.|..|++|+++.|.++|........ ..+.+ ...++++++|+|+|++++|..+...
T Consensus 130 v~~--~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~---------~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~ 198 (252)
T 3oam_A 130 IED--EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNF---------AKADKAIVQPLLRHIGIYAYRAGFINTYLDW 198 (252)
T ss_dssp ECC--HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHH---------HSSSCCCCSCEEEEEEEEEEETTHHHHHHHS
T ss_pred cCC--HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCcc---------ccccccccccceEEEEEEEcCHHHHHHHHcC
Confidence 875 4556 89999999999999999765321000 00000 0125899999999999999877654
Q ss_pred hCCCCCchhh--ccHHhhhcCCcEEEEEEcC-eEEecCCHHHHHHHHhHhhcc
Q 015713 324 SYPLSNDFGS--EIIPASVKDHNVQAFLFND-YWEDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 324 ~~~~~~d~~~--~ii~~li~~~~v~a~~~~g-~w~DIgtp~d~~~A~~~ll~~ 373 (402)
. ++.....+ +.+..+-...+|.++..++ +|.|||||+||.+|++.+.++
T Consensus 199 ~-~~~~e~~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 199 Q-PSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp C-CCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred C-CCcccccchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 2 22111111 2333333346899987644 689999999999999987654
No 21
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.95 E-value=9.2e-28 Score=241.47 Aligned_cols=222 Identities=21% Similarity=0.366 Sum_probs=174.7
Q ss_pred eeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCCC
Q 015713 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDG 172 (402)
Q Consensus 93 m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~ 172 (402)
|+|||||||.|+||+|+|..+||+|+|++|+ |||+|++++|.++|+++|+|+++++ +.+++...+ .
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~---~------- 66 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKL---K------- 66 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHC---T-------
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccC---C-------
Confidence 6899999999999999999999999999999 9999999999999999999999876 667775432 0
Q ss_pred cEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCC--ccHHHHHHHHHhCCCcEEEEEEEc
Q 015713 173 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYR--MDYTEFLQKHIDTKADITVSCVPM 250 (402)
Q Consensus 173 ~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~--~di~~~l~~h~~~~aditi~~~~~ 250 (402)
.+.++.... |+.|++++++.+.. .++|+++.||+++. .++.++++ .++.++++.+.
T Consensus 67 ~i~~~~~~~--------~~~g~~~~l~~~~~---------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~ 124 (401)
T 2ggo_A 67 EISIVTQKD--------DIKGTGAAILSAKF---------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKV 124 (401)
T ss_dssp TCEEEECCT--------TCCBSTTTGGGCCC---------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEEC
T ss_pred cEEEEeCCC--------CCCChHHHHHHhcc---------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEc
Confidence 144544221 23588888876531 47899999999876 56777765 35778888887
Q ss_pred CCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC--C
Q 015713 251 DDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL--S 328 (402)
Q Consensus 251 ~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~--~ 328 (402)
.+ +..|+.+..+++|+|..|.|||..+. .+++++|+|+|++++|.. ++...+. .
T Consensus 125 ~~--~~~~~~v~~~~~g~v~~~~ek~~~~~---------------------~~~~~~Giy~~~~~~~~~-l~~~~~~~~~ 180 (401)
T 2ggo_A 125 SN--PKDYGVLVLDNQNNLSKIIEKPEIPP---------------------SNLINAGIYKLNSDIFTY-LDKISISERG 180 (401)
T ss_dssp SC--CSSSCEEEECTTSSEEEEECSCSSCS---------------------CSEEEEEEEEEETHHHHH-HHHSCCCSSS
T ss_pred CC--CcceeEEEECCCCeEEEEEECCCCCC---------------------CcEEEEEEEEEcHHHHHH-hhhcCcCCCC
Confidence 65 56799999988899999999985431 368999999999999865 4443221 1
Q ss_pred CchhhccHHhhhcC-CcEEEEEEcCeEEecCCHHHHHHHHhHhhcccC
Q 015713 329 NDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSLR 375 (402)
Q Consensus 329 ~d~~~~ii~~li~~-~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~~ 375 (402)
.....++++.+ .. .++.++..+++|.||+||+||.+|++.++.+..
T Consensus 181 ~~~~~~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~ 227 (401)
T 2ggo_A 181 ELELTDAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLV 227 (401)
T ss_dssp CBCHHHHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTC
T ss_pred ceEHHHHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcc
Confidence 12246788877 54 589999999999999999999999999987643
No 22
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.95 E-value=5.9e-27 Score=239.23 Aligned_cols=231 Identities=18% Similarity=0.239 Sum_probs=180.7
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccC
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
++|.|||||||.||||++ .+||+|+|++|+ |||+|+++.|.++|+++|+|++++..+.+.+++.. + +
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~-~--------~ 73 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLAD-P--------S 73 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc-C--------C
Confidence 368999999999999986 689999999999 99999999999999999999999988877776642 1 1
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc--cCCccHHHHHHHHHhCCCcEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH--LYRMDYTEFLQKHIDTKADITVSCV 248 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~--l~~~di~~~l~~h~~~~aditi~~~ 248 (402)
+.++... +..|++++|+.++..++ ..++|++++||+ +...++.++++.|.+ .++++.+.
T Consensus 74 ---~~~v~~~---------~~~g~~~~i~~~~~~~~-----~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 134 (459)
T 4fce_A 74 ---LNWVLQA---------EQLGTGHAMQQAAPHFA-----DDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTV 134 (459)
T ss_dssp ----CEEECS---------SCCCHHHHHHHHGGGSC-----TTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEeCC---------CCCCcHHHHHHHHHhcC-----CCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEE
Confidence 3344321 23699999999987763 348999999999 445678999998865 56777777
Q ss_pred EcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCC--
Q 015713 249 PMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP-- 326 (402)
Q Consensus 249 ~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~-- 326 (402)
+..+ +..||.+..| +|+|..|.|||..... +...+++++|+|+|+++.|..+++....
T Consensus 135 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~~-----------------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 194 (459)
T 4fce_A 135 KLDN--PSGYGRIVRE-NGDVVGIVEHKDASDA-----------------QREINEINTGILVANGRDLKRWLSLLDNNN 194 (459)
T ss_dssp ECSC--CTTSCEEEEE-TTEEEEEECGGGCCTT-----------------GGGCCEEEEEEEEEEHHHHHHHHHTCCCCS
T ss_pred ecCC--CCcccEEEeC-CCcEEEEEECCCCChH-----------------HhhccEEEEEEEEEEHHHHHHHHHHhCccc
Confidence 7765 6789998887 7999999999754321 1134789999999999988777765322
Q ss_pred -CCCchhhccHHhhhcC-CcEEEEEEcCeE--EecCCHHHHHHHHhHhhcc
Q 015713 327 -LSNDFGSEIIPASVKD-HNVQAFLFNDYW--EDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 327 -~~~d~~~~ii~~li~~-~~v~a~~~~g~w--~DIgtp~d~~~A~~~ll~~ 373 (402)
....++.++++.+... .++.++..+++| .+|+||+||..|+..+..+
T Consensus 195 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~ 245 (459)
T 4fce_A 195 AQGEFYITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTE 245 (459)
T ss_dssp TTCSCCTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHH
T ss_pred cCCcEEHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHH
Confidence 2334568889988887 489999999866 6699999999998766644
No 23
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.94 E-value=2.9e-26 Score=233.89 Aligned_cols=231 Identities=21% Similarity=0.261 Sum_probs=179.1
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccC
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
++|.|||||||.||||++ .+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++.. + +
T Consensus 4 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~-~--------~ 70 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLAN-E--------Q 70 (456)
T ss_dssp CCEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTT-C--------C
T ss_pred CcceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhc-C--------C
Confidence 468899999999999974 689999999999 99999999999999999999999987777666531 1 1
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc--cCCccHHHHHHHHHhCCCcEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH--LYRMDYTEFLQKHIDTKADITVSCV 248 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~--l~~~di~~~l~~h~~~~aditi~~~ 248 (402)
++++... +..|++++++.++.+++ ..++|++++||+ +...++.++++.|.+ +++++++.
T Consensus 71 ---~~~v~~~---------~~~g~~~~~~~~~~~~~-----~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~ 131 (456)
T 2v0h_A 71 ---VNWVLQT---------EQLGTAHAVQQAAPFFK-----DNENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTV 131 (456)
T ss_dssp ---CEEEECS---------CCCCHHHHHHHHGGGCC-----TTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEE
T ss_pred ---cEEEeCC---------CCCCcHHHHHHHHHhcC-----CCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEe
Confidence 3444322 23699999999987663 258999999999 345678999998866 57888887
Q ss_pred EcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC-
Q 015713 249 PMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL- 327 (402)
Q Consensus 249 ~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~- 327 (402)
+..+ +..|+.+..| +|+|..|.||+.... ++...+++++|+|+|+++.|.+.++.....
T Consensus 132 ~~~~--~~~~g~v~~~-~g~v~~~~ek~~~~~-----------------~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~ 191 (456)
T 2v0h_A 132 NLDN--PTGYGRIIRE-NGNVVAIVEQKDANA-----------------EQLNIKEVNTGVMVSDGASFKKWLARVGNNN 191 (456)
T ss_dssp ECSS--CTTSCEEEEE-TTEEEEEECTTTCCH-----------------HHHTCCEEEEEEEEEEHHHHHHHHTTCCCCS
T ss_pred ecCC--CCccceEEEc-CCcEEEEEECCCCCh-----------------hHhcCcEEEEEEEEEEHHHHHHHHHHhcccc
Confidence 7765 5679988887 899999999875321 011247899999999999876666543221
Q ss_pred --CCchhhccHHhhhcCC-cEEEEEEcCe--EEecCCHHHHHHHHhHhhcc
Q 015713 328 --SNDFGSEIIPASVKDH-NVQAFLFNDY--WEDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 328 --~~d~~~~ii~~li~~~-~v~a~~~~g~--w~DIgtp~d~~~A~~~ll~~ 373 (402)
...++.++++.+...+ ++.++..+++ |.+|+||+||.+|++.+..+
T Consensus 192 ~~~~~~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~ 242 (456)
T 2v0h_A 192 AQGEYYLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNK 242 (456)
T ss_dssp TTCCCCGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHH
T ss_pred ccccEEHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHH
Confidence 2234678898888764 7999998765 56999999999999876643
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.93 E-value=8.1e-25 Score=208.89 Aligned_cols=238 Identities=16% Similarity=0.180 Sum_probs=161.6
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccC
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
+++.+||||||.|||| | ||+|+||+|+ |||+|+++.+..+|+++|+|+++ .+.+.+++. .+ |
T Consensus 8 M~~~aIIlA~G~stRl-~-----~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~-~~--------g 69 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRL-P-----GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAE-DF--------G 69 (256)
T ss_dssp -CCEEEEECCCC---C-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHH-HT--------T
T ss_pred CCceEEEEcCCCCCCC-C-----CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHH-Hc--------C
Confidence 4688999999999999 3 8999999999 99999999999999999999986 466766664 22 2
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhC-CCcEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDT-KADITVSC 247 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~-~aditi~~ 247 (402)
+.++...+ +++.||+. +.+++..+. ....+.|+++.||. ++. ..+.++++.|.+. ++++++++
T Consensus 70 ---~~v~~~~~-------~~~~Gt~~-i~~a~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~ 135 (256)
T 3tqd_A 70 ---AVVCMTSS-------DHQSGTER-IAEAAVALG---FEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLC 135 (256)
T ss_dssp ---CEEEECCT-------TCCSHHHH-HHHHHHHTT---CCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEE
T ss_pred ---CeEEEeCC-------CCCCcHHH-HHHHHHHhC---cCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 33433222 23458876 777776652 11358899999999 444 5688999998874 56777888
Q ss_pred EEcCC----CCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHh
Q 015713 248 VPMDD----CRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS 323 (402)
Q Consensus 248 ~~~~~----~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~ 323 (402)
.++.+ .++..++ |.+|++|+++.|.++|.+........ +.+.....+++..+|+|.|++++|..+...
T Consensus 136 ~~v~~~~~~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~~~-------~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l 207 (256)
T 3tqd_A 136 TPITEVDELFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTFSD-------KENLQLNGSHYRHVGIYAYRVGFLEEYLSW 207 (256)
T ss_dssp EECCCHHHHTCTTSCE-EEECTTSBEEEEESSCSSCCTTTTTC-------GGGCCCSSCCEEEEEEEEEEHHHHHHHHHS
T ss_pred eEcCCHHHhhCCCccE-EEECCCCEEeEEecCCCCCCCccccc-------ccccccCCcceEEEEEEEcCHHHHHHHHhC
Confidence 87743 1234444 46889999999999987432110000 000001136889999999999999876543
Q ss_pred hCCCCCchhh--ccHHhhhcCCcEEEEEEcCe-EEecCCHHHHHHHHhH
Q 015713 324 SYPLSNDFGS--EIIPASVKDHNVQAFLFNDY-WEDIGTIKSFFMPIWP 369 (402)
Q Consensus 324 ~~~~~~d~~~--~ii~~li~~~~v~a~~~~g~-w~DIgtp~d~~~A~~~ 369 (402)
.++.....+ +.+..+-...+|.++..+++ |.|||||+||.+|++.
T Consensus 208 -~~s~lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 208 -DACPAEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp -CCCHHHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred -CCCcccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 222111111 22333444569999999875 8999999999999864
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.93 E-value=1.3e-24 Score=208.38 Aligned_cols=238 Identities=16% Similarity=0.200 Sum_probs=166.0
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccC
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
+++.|||||||.|||| | +|+|+||+|+ |||+|+++.+.++|+++|+|+++ .+.+.+++. .| +
T Consensus 17 M~~~aIIlA~G~stRl-p-----~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~-~~--------g 78 (264)
T 3k8d_A 17 MSFVVIIPARYASTRL-P-----GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVE-AA--------G 78 (264)
T ss_dssp -CCEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHH-HT--------T
T ss_pred CceEEEEEcCCCCCCC-C-----CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHH-Hc--------C
Confidence 4588999999999999 2 5999999999 99999999999999999999995 566766664 22 2
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cC-CccHHHHHHHHHhCCCcEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LY-RMDYTEFLQKHIDTKADITVSCV 248 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~-~~di~~~l~~h~~~~aditi~~~ 248 (402)
+.++...+ +++.||+. +..+...++ ....+.|+++.||. ++ ...+.++++.|.+.++++++++.
T Consensus 79 ---~~v~~~~~-------~~~~Gt~~-i~~~~~~l~---~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~ 144 (264)
T 3k8d_A 79 ---GEVCMTRA-------DHQSGTER-LAEVVEKCA---FSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAV 144 (264)
T ss_dssp ---CEEEECCT-------TCCSHHHH-HHHHHHHHT---CCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEE
T ss_pred ---CEEEEecC-------CCCCCHHH-HHHHHHHhc---cCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEE
Confidence 33433222 23458876 777776663 12358899999999 44 46689999999988899999999
Q ss_pred EcCCC----CCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhh
Q 015713 249 PMDDC----RASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSS 324 (402)
Q Consensus 249 ~~~~~----~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~ 324 (402)
++.+. .+..+. |.+|++|+++.|.+||.+.......++ ++....+++.++|+|+|++++|..+...
T Consensus 145 ~v~d~~~~~~p~~vk-Vv~d~~g~~l~fsr~~ip~~r~~~~~~--------~~~~~~~~~~~~GiY~y~~~~l~~~~~~- 214 (264)
T 3k8d_A 145 PIHNAEEAFNPNAVK-VVLDAEGYALYFSRATIPWDRDRFAEG--------LETVGDNFLRHLGIYGYRAGFIRRYVNW- 214 (264)
T ss_dssp ECCSHHHHTCTTSCE-EEECTTSBEEEEESSCCSCCHHHHHHC--------SSCCCSCCEEECSEEEEEHHHHHHHHHS-
T ss_pred EcCCHHHccCCCceE-EEECCCCeEEEEecCCCCCCCcccccc--------ccccCCcceEEEEEEEECHHHHHHHHhC-
Confidence 88652 122333 457899999999999864211000000 0000125789999999999999877543
Q ss_pred CCCCCchhh--ccHHhhhcCCcEEEEEEcC-eEEecCCHHHHHHHHhHh
Q 015713 325 YPLSNDFGS--EIIPASVKDHNVQAFLFND-YWEDIGTIKSFFMPIWPS 370 (402)
Q Consensus 325 ~~~~~d~~~--~ii~~li~~~~v~a~~~~g-~w~DIgtp~d~~~A~~~l 370 (402)
.+......+ +.+..+-...+|.++...+ +|.+||||+||..|++.+
T Consensus 215 ~~~~lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 215 QPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp CCCHHHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred CCChhhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 222111101 2233334456899986644 699999999999998754
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.93 E-value=2e-24 Score=201.16 Aligned_cols=225 Identities=16% Similarity=0.221 Sum_probs=154.5
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
++.|||||||.||||+ ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+ +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~---------~-- 60 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVED---------L-- 60 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTT---------T--
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHh---------c--
Confidence 4789999999999995 9999999999 9999999999999 9999999986 566666531 1
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~~~ 249 (402)
+.++...+. +..|+++++ .++..+ ..+.|++++||+ +++ .++.++++.|.+.++.++++...
T Consensus 61 --~~~~~~~~~-------~~~g~~~~~-~~~~~~------~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 124 (234)
T 2y6p_A 61 --CEVFLTPSD-------LPSGSDRVL-YVVRDL------DVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKD 124 (234)
T ss_dssp --SEEEECCTT-------CCSHHHHHH-HHHTTC------CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEEC
T ss_pred --eEEEECCcc-------cccchHHHH-HHHHhC------CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCC
Confidence 223322111 124787766 333222 357899999999 877 67899999998877444444432
Q ss_pred cCC-CCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCC
Q 015713 250 MDD-CRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS 328 (402)
Q Consensus 250 ~~~-~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~ 328 (402)
..+ ..+..++ +..|++|+|..|.|||...... +. ..++++++|+|+|+++.|..+.+.. +..
T Consensus 125 ~~~~~~~~~~~-~~~~~~g~v~~~~e~~~~~~~~--------------~~-~~~~~~~~giy~~~~~~l~~~~~~~-~~~ 187 (234)
T 2y6p_A 125 KEAYERPEDVK-VVLDREGYALYFSRSPIPYFRK--------------ND-TFYPLKHVGIYGFRKETLMEFGAMP-PSK 187 (234)
T ss_dssp SGGGGCTTSCE-EEECTTSBEEEEESSCCSCCSS--------------CC-SSCCEEEEEEEEEEHHHHHHHHHSC-CCH
T ss_pred HHHhcCCCceE-EEEcCCCCEeeeecCCCCcccc--------------cc-cceeeEEEEEEEcCHHHHHHHHhCC-CCc
Confidence 111 1133444 3457889999999987531100 00 0135679999999999987765421 111
Q ss_pred Cchhhc--cHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHh
Q 015713 329 NDFGSE--IIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPS 370 (402)
Q Consensus 329 ~d~~~~--ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~l 370 (402)
....+. .+..+....++.++..+++|.|||||+||..|++.+
T Consensus 188 ~~~~d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 188 LEQIEGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HHHHHTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred cchhhHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 111111 233333467999999999999999999999998765
No 27
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.92 E-value=4.8e-24 Score=200.18 Aligned_cols=230 Identities=17% Similarity=0.223 Sum_probs=159.8
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCC-CeEEEEccCCchhHHHHHHhhccCCCCcccC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGF-NKIFIMTQFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI-~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
++.|||||||.|||| | ||+|+|++|+ |||+|+++.+..+|+ ++|+|++++ +.+.+++.+ + +
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~-~--------~ 63 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA-F--------G 63 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH-T--------T
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH-c--------C
Confidence 488999999999999 5 9999999999 999999999999996 999999986 566666642 2 2
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCcc-C-CccHHHHHHHHHhC-CCcEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHL-Y-RMDYTEFLQKHIDT-KADITVSC 247 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l-~-~~di~~~l~~h~~~-~aditi~~ 247 (402)
+.++...+. +..|+++++ .+...+ ..+.+++++||+. . ..++.++++.|.+. ++++++++
T Consensus 64 ---~~~~~~~~~-------~~~g~~~~~-~~~~~~------~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~ 126 (245)
T 1h7e_A 64 ---GKAIMTRND-------HESGTDRLV-EVMHKV------EADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLC 126 (245)
T ss_dssp ---CEEEECCSC-------CSSHHHHHH-HHHHHS------CCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred ---CeEEeCCCc-------cCCcHHHHH-HHHHhC------CCCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEe
Confidence 344432221 234776655 343333 3478999999994 3 35689999999887 78888877
Q ss_pred EEcCCCC--CCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhC
Q 015713 248 VPMDDCR--ASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSY 325 (402)
Q Consensus 248 ~~~~~~~--~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~ 325 (402)
.+.+... ...+..+..+++|++..|.+++...... + ...+++.++|+|+|+++.|..++ . .
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~r~--------------~-~~~~~~~~~g~y~~~~~~l~~~~-~-~ 189 (245)
T 1h7e_A 127 HAISAAEAAEPSTVKVVVNTRQDALYFSRSPIPYPRN--------------A-EKARYLKHVGIYAYRRDVLQNYS-Q-L 189 (245)
T ss_dssp EEECHHHHTCTTSCEEEECTTCBEEEEESSCSSCCTT--------------G-GGCCEEEEEEEEEEEHHHHHHGG-G-S
T ss_pred ecCCHHHhcCCCCcEEEECCCCcEEEeecCCCCCCcc--------------c-ccCceeEEEEEEEcCHHHHHHHH-h-C
Confidence 7762110 1122122336789999999875431100 0 00135779999999999887665 2 2
Q ss_pred CCCCchhhccHHhhh--c-CCcEEEEEEcCeEEecCCHHHHHHHHhHhhcc
Q 015713 326 PLSNDFGSEIIPASV--K-DHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 326 ~~~~d~~~~ii~~li--~-~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~ 373 (402)
+...-...+.++.+. . ..++.++..+++|.|||||+||..|+..+..+
T Consensus 190 ~~~~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~~~ 240 (245)
T 1h7e_A 190 PESMPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQE 240 (245)
T ss_dssp CCCHHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHHHH
T ss_pred CCCccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHh
Confidence 221122345555432 3 56899999999999999999999999876543
No 28
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.91 E-value=1.7e-24 Score=202.16 Aligned_cols=214 Identities=14% Similarity=0.186 Sum_probs=136.9
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
|++|.+||||||.||||+|+ ||+|+|++|+ |||+|+++++.++ +++|+|++ ++.+++.+++.+.|
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~~-------- 80 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKDK-------- 80 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTTS--------
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHhc--------
Confidence 66799999999999999886 9999999999 9999999999999 99999999 77778877764333
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCccH-HHHHHHHHhCCCcEEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMDY-TEFLQKHIDTKADITVSCV 248 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~di-~~~l~~h~~~~aditi~~~ 248 (402)
+. .+.++.... +..|++++++.++..+ .+++++++||+.++.++ .++++ .. . +++..
T Consensus 81 ~~-~~~~v~~~~--------~~~g~~~~i~~a~~~~-------~~~~lv~~~D~p~~~~~~~~l~~----~~-~-~~~~~ 138 (232)
T 2xme_A 81 GF-NYKIVRHDR--------PEKGNGYSLLVAKNHV-------EDRFILTMGDHVYSQQFIEKAVR----GE-G-VIADR 138 (232)
T ss_dssp CC-CEEEEECSC--------GGGCHHHHHHTTGGGC-------CSSEEEEETTEEECHHHHHHHTT----CC-E-EEEES
T ss_pred CC-cEEEEECCC--------CCCCcHHHHHHHHHHC-------CCCEEEEcCCcccCHHHHHHHHh----CC-C-cEEEc
Confidence 21 155554221 1258999999887554 26899999999876553 34433 21 1 22211
Q ss_pred EcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCC
Q 015713 249 PMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS 328 (402)
Q Consensus 249 ~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~ 328 (402)
........+++.+..+ +|+|+.|.|++.. .+.+++|+|+|++++|..+ +......
T Consensus 139 ~~~~~~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~~l-~~~~~~g 193 (232)
T 2xme_A 139 EPRFVDIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFEHA-EKLRDRE 193 (232)
T ss_dssp SCSSSCTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHHHH-GGGTTSS
T ss_pred cccccCCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHHHH-HHHHhcC
Confidence 1111123567777676 7899999987642 2467899999999998744 4332111
Q ss_pred CchhhccHHhhhcCCcEEEEEEc-CeEEecCCHHHHHHHHhH
Q 015713 329 NDFGSEIIPASVKDHNVQAFLFN-DYWEDIGTIKSFFMPIWP 369 (402)
Q Consensus 329 ~d~~~~ii~~li~~~~v~a~~~~-g~w~DIgtp~d~~~A~~~ 369 (402)
.. -+..+++++++.++.++ ++|.|||||+||.+|+..
T Consensus 194 ~~----~l~~ll~~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 194 EI----PLSEIVKLARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp CC----CHHHHHHHHTCBEEECCSCCEEEEECC---------
T ss_pred hh----HHHHHHHcCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 11 13344444567777765 689999999999998764
No 29
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.91 E-value=9.9e-23 Score=193.88 Aligned_cols=246 Identities=15% Similarity=0.158 Sum_probs=162.3
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
+|.|||||||.||||. +|+|+|++|+ |||+|+++.+..+|+++|+|++++ +.+.+++.+ + +
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~-~--------~- 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS-F--------G- 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH-T--------T-
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh-c--------C-
Confidence 4789999999999993 4999999999 999999999999999999999975 456666542 2 2
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cC-CccHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LY-RMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~-~~di~~~l~~h~~~~aditi~~~~ 249 (402)
+.++...+. +..|++ .+..+...++ ....+.|++++||+ +. ..++.++++.|.+.++++++++.+
T Consensus 63 --~~~~~~~~~-------~~~g~~-~~~~~~~~l~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~ 129 (262)
T 1vic_A 63 --AEVCMTSVN-------HNSGTE-RLAEVVEKLA---IPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVK 129 (262)
T ss_dssp --CEEEECCCS-------SCCHHH-HHHHHHHHTT---CCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred --CEEEECCcc-------ccCChH-HHHHHHHHhc---cCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 334332111 124665 4555555443 11357899999999 33 467899999998888888888888
Q ss_pred cCCC---CCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCC
Q 015713 250 MDDC---RASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP 326 (402)
Q Consensus 250 ~~~~---~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~ 326 (402)
..+. ....|+.+..|++|++..|.+++..........+. ..+. .+. ...+..++|+|+|+++.|..+... .+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~~~~-~~~~-~~~--p~~~~~~~giy~~~~~~l~~~~~~-~~ 204 (262)
T 1vic_A 130 IHDAEELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFMNLQ-DVQK-VQL--SDAYLRHIGIYAYRAGFIKQYVQW-AP 204 (262)
T ss_dssp CCCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHTTCS-CGGG-CCC--CTTCEEEEEEEEEEHHHHHHHHHS-CC
T ss_pred cCCHHHhcCCCceEEEECCCCCEeeeecCCCCcCCccccccc-cccc-ccc--ccceEEEEEEEEeeHHHHHHHHhC-CC
Confidence 7541 01344555558889999999876321100000000 0000 000 012678999999999988765432 11
Q ss_pred CCCchhhccHH--hhh-cCCcEEEEEEc-CeEEecCCHHHHHHHHhHhhcccC
Q 015713 327 LSNDFGSEIIP--ASV-KDHNVQAFLFN-DYWEDIGTIKSFFMPIWPSQNSLR 375 (402)
Q Consensus 327 ~~~d~~~~ii~--~li-~~~~v~a~~~~-g~w~DIgtp~d~~~A~~~ll~~~~ 375 (402)
...+.. ++++ .++ ...+|.++..+ ++|.|||||+||..|+..+..+.+
T Consensus 205 ~~~~~~-e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~~~ 256 (262)
T 1vic_A 205 TQLENL-EKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAANGS 256 (262)
T ss_dssp CHHHHH-HTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHTCC
T ss_pred Cchhhh-hhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhcCc
Confidence 111111 1121 234 35689999998 799999999999999998875543
No 30
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.90 E-value=2.8e-22 Score=190.90 Aligned_cols=238 Identities=15% Similarity=0.171 Sum_probs=162.2
Q ss_pred eeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHH-HHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPM-SNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 93 m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i-~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
+.|||||+|.||||. +|+|+||+|+ |||+|++ +.+..+|+++|+|+++ .+.+.+++. .+ |
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~-~~--------g- 62 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATD--DERIAEICR-AE--------G- 62 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHH-TT--------T-
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHH-Hc--------C-
Confidence 369999999999994 5999999999 9999999 9999999999999996 466666653 22 2
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhC-CCcEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDT-KADITVSCV 248 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~-~aditi~~~ 248 (402)
++++...+. +..|| +++..++..+.. ...+.|+++.||. +.. ..+.++++.|.+. ++.+..++.
T Consensus 63 --~~v~~~~~~-------~~~Gt-~~i~~a~~~~~~---~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~ 129 (253)
T 4fcu_A 63 --VDVVLTSAD-------HPSGT-DRLSEVARIKGW---DADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCE 129 (253)
T ss_dssp --CCEEECCTT-------CCCHH-HHHHHHHHHHTC---CTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEE
T ss_pred --CeEEEeCCC-------CCChH-HHHHHHHHhcCc---CCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeE
Confidence 223321121 12466 578888776631 1347899999999 554 5688999998876 344444444
Q ss_pred EcCC----CCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhh
Q 015713 249 PMDD----CRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSS 324 (402)
Q Consensus 249 ~~~~----~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~ 324 (402)
+..+ .++..++ |..|++|+++.|.++|.+........+ ++.....++.++|+|+|++++|..+...
T Consensus 130 ~~~~~~~~~~p~~~k-vv~d~~g~~l~fsr~~ip~~r~~~~~~--------~~~~~~~~~~~~GiY~f~~~~l~~~~~~- 199 (253)
T 4fcu_A 130 PIHALDEFQRDSIVK-VVMSKQNEALYFSRATIPYDRDGAKRD--------EPTLHTQAFRHLGLYAYRVSLLQEYVTW- 199 (253)
T ss_dssp ECCCHHHHHCTTSCE-EEECTTSBEEEEESSCCSCCTTTSSSS--------SCCCCSCCEEEEEEEEEEHHHHHHHTTS-
T ss_pred EcCCHHHccCCCccE-EEECCCCeEEEecCCCCCCCCCccccc--------ccccccceeEEEEEEEeCHHHHHHHHhC-
Confidence 4321 1244454 568889999999998764321100000 0000125788999999999999877532
Q ss_pred CCCCCchhhccHHh---hhcCCcEEEEEEcCe-EEecCCHHHHHHHHhHhhcc
Q 015713 325 YPLSNDFGSEIIPA---SVKDHNVQAFLFNDY-WEDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 325 ~~~~~d~~~~ii~~---li~~~~v~a~~~~g~-w~DIgtp~d~~~A~~~ll~~ 373 (402)
+...-...|.+.. +-...+|.++..+++ |.+||||+||.+|++.+.++
T Consensus 200 -~~~~le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 200 -EMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp -CCCHHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred -CCCcccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 2111112233333 334568999999999 99999999999999876543
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.89 E-value=5.7e-22 Score=187.30 Aligned_cols=231 Identities=15% Similarity=0.140 Sum_probs=156.6
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCchhHHHHHHhhccCCCCcc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNSFSLNRHLARSYNLGNGVN 168 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~~~i~~~l~~~y~~~~g~~ 168 (402)
|+.+.+||||||.||||++ ..+||+|+|++|+ |||+|+++.+.+++ +++|+|++++......+.+.+.|..
T Consensus 1 M~~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~~----- 72 (246)
T 3f1c_A 1 MSLIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYIS----- 72 (246)
T ss_dssp -CCEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHCC-----
T ss_pred CCccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhCC-----
Confidence 5568999999999999976 5789999999999 99999999999997 9999999998765433333334411
Q ss_pred cCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhc-CCCceEEEEcCCc-cC-CccHHHHHHHHHhCCCcEEE
Q 015713 169 FGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKN-KNVENVLILSGDH-LY-RMDYTEFLQKHIDTKADITV 245 (402)
Q Consensus 169 ~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~-~~~e~~Lvl~gD~-l~-~~di~~~l~~h~~~~aditi 245 (402)
...+.++.. + .+..++++.++..+.+... ...+.++|+.||. +. ...+.++++.|.+.++. +
T Consensus 73 --~~~~~~~~~-~----------~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~--i 137 (246)
T 3f1c_A 73 --DDRIVVIEG-G----------EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAV--D 137 (246)
T ss_dssp --CTTEEEEEC-C----------SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEE--E
T ss_pred --CCCEEEECC-C----------CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCE--E
Confidence 112454432 1 2678999999988863100 1257899999998 44 45689999999887654 4
Q ss_pred EEEEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhC
Q 015713 246 SCVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSY 325 (402)
Q Consensus 246 ~~~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~ 325 (402)
.+.+..+ .++..++++.|..+.+++. .+..-.-++|+.+.|.+.++...
T Consensus 138 ~~~~~~d------~i~~~~~~~~v~~~~~r~~-------------------------l~~~qtpq~f~~~~L~~a~~~~~ 186 (246)
T 3f1c_A 138 TVIEALD------TIVESSNHEVITDIPVRDH-------------------------MYQGQTPQSFNMKKVFNHYQNLT 186 (246)
T ss_dssp EEEECSS------CEEECSSSSBCCBCCCGGG-------------------------EEEEEEEEEEEHHHHHHHHHTSC
T ss_pred EEEeccc------eEEEecCCCeEEEecChHH-------------------------hhhhcCCceeEHHHHHHHHHHHH
Confidence 4565543 3455555566665555532 12223457999998887776531
Q ss_pred CCCCchhhccHHhhhcC-CcEEEEEEcCeEEecCCHHHHHHHHhHhhccc
Q 015713 326 PLSNDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSL 374 (402)
Q Consensus 326 ~~~~d~~~~ii~~li~~-~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~ 374 (402)
.....+.+|.+..+... .+|.++..+.+|.+|+||+||..|+..+..+.
T Consensus 187 ~~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 187 PEKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp HHHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred HcCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 11122445666666554 57999999999999999999999999876544
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.88 E-value=6.2e-22 Score=184.11 Aligned_cols=223 Identities=13% Similarity=0.079 Sum_probs=142.5
Q ss_pred eeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhC-CCCeEEEEccCCc-hhHHHHHHhhccCCCCcccC
Q 015713 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINS-GFNKIFIMTQFNS-FSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 93 m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~-GI~~IiVv~~~~~-~~i~~~l~~~y~~~~g~~~~ 170 (402)
|.+||||||.||||++ ..+||+|+|++|+ |||+|+++++.++ ++++|+|+++++. +.+.+++. .|. ..+.
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~-~~~----~~~~ 74 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVD-KYL----PLYK 74 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHH-HHC----GGGG
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHH-hcc----cccc
Confidence 7899999999999987 6789999999999 9999999999998 5999999999877 44555443 331 1111
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcC--CCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNK--NVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVS 246 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~--~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~ 246 (402)
..+.+... ..|++++++.++..+++. .. ..+.++++.||+ +.. .++.++++.|.+.++ .++
T Consensus 75 -~~~~~~~~-----------~~~~~~~i~~~l~~~~~~-~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~ 139 (236)
T 2vsh_A 75 -ERIIITKG-----------GADRNTSIKNIIEAIDAY-RPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDT 139 (236)
T ss_dssp -GGEEEEEC-----------CSSHHHHHHHHHHHHHHH-SCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEE
T ss_pred -CceEEECC-----------CCchHHHHHHHHHHHHhh-ccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEE
Confidence 01222211 037899999998887421 01 236799999999 554 578999999887664 345
Q ss_pred EEEcCCCCCCcceEEEECCCC-cEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhC
Q 015713 247 CVPMDDCRASDYGLMKIDRSG-QIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSY 325 (402)
Q Consensus 247 ~~~~~~~~~~~~g~v~iD~~g-~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~ 325 (402)
+.+..+ + ++.+++| ++..+.+++. .......|+|+++.|..+++...
T Consensus 140 ~~~~~~--~-----~~~~~~g~~~~~~~~~~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~ 187 (236)
T 2vsh_A 140 VVEAVD--T-----IVESTNGQFITDIPNRAH-------------------------LYQGQTPQTFRCKDFMDLYGSLS 187 (236)
T ss_dssp EEECCS--C-----EEECSSSSBCCBCCCGGG-------------------------EEEEEEEEEEEHHHHHHHHHTCC
T ss_pred EEeccc--c-----EEEeCCCCeeeeecChHH-------------------------heeecCCcEecHHHHHHHHHHHH
Confidence 556543 2 2334567 7777766532 11112378999998877665422
Q ss_pred CCCCch-hhccHHhhhc-CCcEEEEEEcCeEEecCCHHHHHHHHhHhh
Q 015713 326 PLSNDF-GSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFMPIWPSQ 371 (402)
Q Consensus 326 ~~~~d~-~~~ii~~li~-~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll 371 (402)
.. ..+ ..+.+..+.. ..++.++..+++|.|||||+||..|+..+.
T Consensus 188 ~~-g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~~ 234 (236)
T 2vsh_A 188 DE-EKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMIE 234 (236)
T ss_dssp HH-HHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHTC
T ss_pred hc-CCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHhh
Confidence 11 111 2333344433 357888888889999999999999988654
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.87 E-value=2.3e-21 Score=180.30 Aligned_cols=214 Identities=15% Similarity=0.118 Sum_probs=148.1
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCchhHHHHHHhhccCCCCcccC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
++.|||||||.||||. ||+|+||+|+ |||+|+++.+.++| +++|+|++++ +.+.+++. .+ +
T Consensus 4 ~~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~~--~~i~~~~~-~~--------~ 65 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTDG--GLIAEEAK-NF--------G 65 (228)
T ss_dssp EEEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEESC--HHHHHHHH-HT--------T
T ss_pred ceEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECCC--HHHHHHHH-Hc--------C
Confidence 4679999999999995 8999999999 99999999999988 8999999964 45555543 22 2
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCcc-CC-ccHHHHHHHHHhCCCcEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHL-YR-MDYTEFLQKHIDTKADITVSCV 248 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l-~~-~di~~~l~~h~~~~aditi~~~ 248 (402)
+.++........ +..|++++|+.++..+. ...+.|++++||+. .. .++.++++.|.+.++++++.+.
T Consensus 66 ---~~~~~~~~~~~~----~~~g~~~sv~~~l~~~~----~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~ 134 (228)
T 1ezi_A 66 ---VEVVLRPAELAS----DTASSISGVIHALETIG----SNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSAC 134 (228)
T ss_dssp ---CEEEECCC----------CHHHHHHHHHHHHHT----CCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEE
T ss_pred ---CEEEeCchHHcC----CCCChHHHHHHHHHHhC----CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEE
Confidence 233221110000 12478999999988873 13478999999993 34 5688999888777778888888
Q ss_pred EcCCCCCCcceEEEECCCCcEEEEEecC----CCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhh
Q 015713 249 PMDDCRASDYGLMKIDRSGQIIQFAEKP----KGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSS 324 (402)
Q Consensus 249 ~~~~~~~~~~g~v~iD~~g~V~~~~EKp----~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~ 324 (402)
+..+. +..+ +.+|++|++..|.+.. ..... ...+..++|+|+++++.|.+.+
T Consensus 135 ~~~~~-p~~~--~~~~~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~~giy~~~~~~l~~~~--- 190 (228)
T 1ezi_A 135 PMEHH-PLKT--LLQINNGEYAPMRHLSDLEQPRQQL------------------PQAFRPNGAIYINDTASLIANN--- 190 (228)
T ss_dssp ECSSC-TTSC--EEECC--CEEESSCHHHHTCCGGGS------------------CCEEEEEEEEEEEEHHHHHHHT---
T ss_pred ecCCC-ccee--eEEcCCCcEeeccccccccCCcccC------------------chhheeeeEEEEEeHHHHhhCC---
Confidence 77541 2223 3347788999887621 11100 0124567899999998876431
Q ss_pred CCCCCchhhccHHhhhcCCcEEEEEEc-CeEEecCCHHHHHHHHhHhhc
Q 015713 325 YPLSNDFGSEIIPASVKDHNVQAFLFN-DYWEDIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 325 ~~~~~d~~~~ii~~li~~~~v~a~~~~-g~w~DIgtp~d~~~A~~~ll~ 372 (402)
.+ ...++.++..+ ++|.|||||+||..|+..+..
T Consensus 191 ---------~~-----~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~~ 225 (228)
T 1ezi_A 191 ---------CF-----FIAPTKLYIMSHQDSIDIDTELDLQQAENILNH 225 (228)
T ss_dssp ---------SS-----CCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC-
T ss_pred ---------cc-----cCCceEEEEeCcccccCCCCHHHHHHHHHHHHh
Confidence 00 14577778776 589999999999999887654
No 34
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.87 E-value=2.7e-21 Score=178.50 Aligned_cols=214 Identities=17% Similarity=0.145 Sum_probs=149.9
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCchh-HHHHHHhhccCCCCccc
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNSFS-LNRHLARSYNLGNGVNF 169 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~~~-i~~~l~~~y~~~~g~~~ 169 (402)
+|.+||||||.||||+ ...||+|+|++|+ |||+|+++.+..+| +++|+|++++.... +.+++ . +
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~------~-~--- 67 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVF------G-G--- 67 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHT------C-B---
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHh------c-c---
Confidence 4889999999999997 4589999999999 99999999999988 99999999986533 32221 1 1
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSC 247 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~ 247 (402)
. .+.++... .+++++++.++..++ ..+.++++.||+ +.. .++.++++.|. .+.++++.+
T Consensus 68 -~-~v~~~~~~-----------~~~~~~i~~al~~~~-----~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~ 128 (223)
T 2xwl_A 68 -E-DSVIVSGG-----------VDRTESVALALEAAG-----DAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPG 128 (223)
T ss_dssp -T-TEEEEECC-----------SSHHHHHHHHHTTCT-----TCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEE
T ss_pred -C-CeEEEcCC-----------CCHHHHHHHHHHhcC-----CCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEE
Confidence 1 25544321 257889988876552 347799999999 444 46888998883 234666766
Q ss_pred EEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC
Q 015713 248 VPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL 327 (402)
Q Consensus 248 ~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~ 327 (402)
.+..+ +..+ +|++|++..+.|++. .......|+|++..+..+++...
T Consensus 129 ~~~~d--~~~~----~~~~g~~~~~~e~~~-------------------------l~~~~~p~~f~~~~l~~~~~~~~-- 175 (223)
T 2xwl_A 129 LAPAD--TIKA----VDANGAVLGTPERAG-------------------------LRAVQTPQGFHADVLRRAYARAT-- 175 (223)
T ss_dssp ECCSS--CEEE----ECTTSBEEECCCGGG-------------------------EEEECSCEEEEHHHHHHHHTTCC--
T ss_pred Eeccc--ceEE----EcCCCcEEeecChHH-------------------------heeeeCCcccCHHHHHHHHHHhh--
Confidence 66643 2222 377889988877642 11223458899988876664421
Q ss_pred CCchhhccHHhhhc-CCcEEEEEEcCeEEecCCHHHHHHHHhHhhc
Q 015713 328 SNDFGSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 328 ~~d~~~~ii~~li~-~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~ 372 (402)
..+..+....+.. ..++..+..+++|.|||||+||..|+..+..
T Consensus 176 -~~~~~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 176 -AGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp -SCCCCCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred -CCCCccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 2223334443333 3578888888899999999999999887654
No 35
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.86 E-value=2e-20 Score=173.76 Aligned_cols=220 Identities=12% Similarity=0.091 Sum_probs=136.9
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
++|.+||||||.||||++ ..||+|+|++|+ |||+|+++.+..++ +++|+|+++++.+.+.+ +.+ + +
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~--~----- 71 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQT-A--F----- 71 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHH-H--C-----
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHh-c--C-----
Confidence 458999999999999986 579999999999 99999999999985 99999999988776665 542 2 1
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhh-cCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAK-NKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVS 246 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~-~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~ 246 (402)
...+.++. . ..|++++++.++..+.+.. ....+.++++.||+ +.. ..+.++++.|.+.+..+ ++
T Consensus 72 -~~~i~~~~-~----------~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~~-~~ 138 (231)
T 1vgw_A 72 -PQVRVWKN-G----------GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGG-IL 138 (231)
T ss_dssp -TTSEEECC-C----------CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCE-EE
T ss_pred -CCceEEEc-C----------CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCeE-EE
Confidence 11244431 1 1489999999988774200 00247899999998 444 45788998887654223 45
Q ss_pred EEEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCC
Q 015713 247 CVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP 326 (402)
Q Consensus 247 ~~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~ 326 (402)
+.+..+ . ++.+++|+|....++ . ..+.....|+|+.+.|..+++....
T Consensus 139 ~~~~~~--~-----~~~~~~g~i~~~~~~---~----------------------~~~~~~~p~~f~~~~l~~~~~~~~~ 186 (231)
T 1vgw_A 139 AVPVAD--T-----LKRAESGQISATVDR---S----------------------GLWQAQTPQLFQAGLLHRALAAENL 186 (231)
T ss_dssp EEECCS--C-----EEEESSSBEEEEECC---T----------------------TEEEEEEEEEEEHHHHHHHHHC---
T ss_pred Eeeccc--c-----eEEeCCCceEecCCh---H----------------------HheeeeCCcEecHHHHHHHHHHHhh
Confidence 555533 1 111245666543321 1 1222335899999988777654321
Q ss_pred CCCchhhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHh
Q 015713 327 LSNDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPS 370 (402)
Q Consensus 327 ~~~d~~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~l 370 (402)
........++..+ ..++..+..++.|.|||||+||..|+..+
T Consensus 187 ~g~~~~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 187 GGITDEASAVEKL--GVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp -CCCSHHHHHHTT--TCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred cCCCcHHHHHHHc--CCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 1100112223222 35788888777899999999999998754
No 36
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.86 E-value=1.4e-21 Score=181.33 Aligned_cols=220 Identities=14% Similarity=0.088 Sum_probs=141.4
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhC-CCCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINS-GFNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~-GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
++|.|||||||.||||+ ..+||+|+|++|+ |||+|+++.+.++ |+++|+|++++..+.+.+++...|
T Consensus 3 ~~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~~-------- 70 (228)
T 2yc3_A 3 KSVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESI-------- 70 (228)
T ss_dssp TCEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTTS--------
T ss_pred cceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHhC--------
Confidence 46899999999999995 3579999999999 9999999999998 899999999988766655543222
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSC 247 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~ 247 (402)
+. .+.++... .|..++++.++..+++ ..+.|+++.||. +.. .++.++++.|.+.++ ++++
T Consensus 71 ~~-~v~~~~~~-----------~~~~~sv~~al~~~~~----~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~ 132 (228)
T 2yc3_A 71 DV-DLSFAIPG-----------KERQDSVYSGLQEIDV----NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLG 132 (228)
T ss_dssp SS-EEEEECCC-----------SSHHHHHHHHHTTSCT----TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEE
T ss_pred CC-cEEEECCC-----------CCHHHHHHHHHHhhcc----CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEE
Confidence 21 14444311 3789999999876631 246789999997 444 568899998876653 4555
Q ss_pred EEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC
Q 015713 248 VPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL 327 (402)
Q Consensus 248 ~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~ 327 (402)
.+..+ ++..+|++|.+..+.+++ . .+.. ...|+|+.+.|.+.++.....
T Consensus 133 ~~~~~------~~~~~~~~~~v~~~~~~~---~---------------------~~~~-~~~~~f~~~~l~~~~~~~~~~ 181 (228)
T 2yc3_A 133 VPAKA------TIKEVNSDSLVVKTLDRK---T---------------------LWEM-QTPQVIKPELLKKGFELVKSE 181 (228)
T ss_dssp EECCS------CCCCBCTTSCBCCCCSCC---C---------------------CEEE-EEEEEECHHHHHHHHHHHHHH
T ss_pred Eeccc------eEEEEcCCCceEEecCcc---c---------------------eEEE-eCCcEEEHHHHHHHHHHHHhc
Confidence 55433 122235555554332111 0 1223 348999988776655321111
Q ss_pred CCchhhccHHhhhcC-CcEEEEEEcCeEEecCCHHHHHHHHhHhhc
Q 015713 328 SNDFGSEIIPASVKD-HNVQAFLFNDYWEDIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 328 ~~d~~~~ii~~li~~-~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~ 372 (402)
. .+..+.+..+... .++..+..+..|.|||||+||..|+..+..
T Consensus 182 ~-~~~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 226 (228)
T 2yc3_A 182 G-LEVTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE 226 (228)
T ss_dssp T-CCCCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHTC
T ss_pred C-CCcccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHhh
Confidence 1 1234444444443 466555555679999999999999886653
No 37
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.84 E-value=1.8e-21 Score=182.10 Aligned_cols=200 Identities=14% Similarity=0.165 Sum_probs=139.5
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
+|.+||||||. |||.+.+...||+|+|++|+ |||+|+++.+..+|+ +|+|++.. +.+.+ + + +
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~~--~~i~~-----~-~------~- 63 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGEN--PGLVP-----A-P------A- 63 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESCC--SSCSS-----C-C------S-
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeCh--HHHhh-----h-c------C-
Confidence 47899999999 77766665689999999999 999999999999999 99887653 33321 1 1 1
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc--cCCccHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH--LYRMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~--l~~~di~~~l~~h~~~~aditi~~~~ 249 (402)
+.+ .. ..|++++|+.++..+ . ++|+|++||+ +....+.++++ | ..++++++.+.+
T Consensus 64 --~~~---~~---------~~g~~~~i~~a~~~~------~-~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 64 --LTL---PD---------RGGLLENLEQALEHV------E-GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp --EEE---CC---------CSSHHHHHHHHHHTC------C-SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred --eEe---cC---------CCCHHHHHHHHHHHc------C-CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 444 11 259999999987654 2 7899999999 34456888888 6 667788887776
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhh-----
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSS----- 324 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~----- 324 (402)
.++. ...|+.+ .++|..+.||| .+++|+|+|+++++..+.+..
T Consensus 121 ~~~~-~~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~ 168 (232)
T 2dpw_A 121 KEAV-EARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVA 168 (232)
T ss_dssp HHHH-HHHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHH
T ss_pred ccch-hhhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHH
Confidence 4221 1223321 24566666553 367999999999876543210
Q ss_pred CCC-------------------CCchhhccHHhhhc--CCcEEEEEEc--CeEEecCCHHHHH
Q 015713 325 YPL-------------------SNDFGSEIIPASVK--DHNVQAFLFN--DYWEDIGTIKSFF 364 (402)
Q Consensus 325 ~~~-------------------~~d~~~~ii~~li~--~~~v~a~~~~--g~w~DIgtp~d~~ 364 (402)
... .....+++++.++. ..++.++.++ +.|.|||||+||.
T Consensus 169 ~~~~P~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 169 LRKRPLALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp TTTCHHHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred hccCHHHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 010 12234566666554 3678888874 5799999999984
No 38
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.82 E-value=5.3e-19 Score=165.11 Aligned_cols=221 Identities=11% Similarity=0.151 Sum_probs=143.9
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCchhHHHHHHhhccCCCCcc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNSFSLNRHLARSYNLGNGVN 168 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~~~i~~~l~~~y~~~~g~~ 168 (402)
|++|.+||||||.||||+ ...||+|+|++|+ |||+|+++.+..++ +++|+|++++..+.+.+ +. .+
T Consensus 5 ~~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~-~~------- 71 (236)
T 1i52_A 5 HLDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LP-LA------- 71 (236)
T ss_dssp CCCEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SG-GG-------
T ss_pred CCceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HH-hc-------
Confidence 567899999999999996 4579999999999 99999999999987 89999999987666554 32 22
Q ss_pred cCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCCc-cHHHHHHHHHhCCCcEEEE
Q 015713 169 FGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYRM-DYTEFLQKHIDTKADITVS 246 (402)
Q Consensus 169 ~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~~-di~~~l~~h~~~~aditi~ 246 (402)
+...+.++... .|+.++++.++..+. ..+.|+++.||+ +... .+.++++.+.+.++.. +.
T Consensus 72 -~~~~v~~~~~~-----------~g~~~~i~~al~~~~-----~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~ 133 (236)
T 1i52_A 72 -NHPQITVVDGG-----------DERADSVLAGLKAAG-----DAQWVLVHDAARPCLHQDDLARLLALSETSRTGG-IL 133 (236)
T ss_dssp -GCTTEEEEECC-----------SSHHHHHHHHHHTST-----TCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EE
T ss_pred -CCCCEEEECCC-----------CCHHHHHHHHHHhcC-----CCCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EE
Confidence 11125544321 378899998876652 247899999999 4454 5788888776655333 44
Q ss_pred EEEcCCCCCCcceEEEECCC-CcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhC
Q 015713 247 CVPMDDCRASDYGLMKIDRS-GQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSY 325 (402)
Q Consensus 247 ~~~~~~~~~~~~g~v~iD~~-g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~ 325 (402)
+.+..+ . + ..++++ |++....+. . ..+..-+.++|+.+.+..+++...
T Consensus 134 ~~~~~~--~--~--~~~~~~~~~i~~~~~~---~----------------------~i~~~~~p~~f~~~~l~~~~~~~~ 182 (236)
T 1i52_A 134 AAPVRD--T--M--KRAEPGKNAIAHTVDR---N----------------------GLWHALTPQFFPRELLHDCLTRAL 182 (236)
T ss_dssp EEECCS--C--E--EEECTTSSSEEEEECC---T----------------------TCEEEEEEEEEEHHHHHHHHHHHH
T ss_pred EEeccc--c--E--EEEcCCCCceeeccCh---H----------------------hheeeeCCceecHHHHHHHHHHHH
Confidence 445432 1 1 123444 566543211 0 012222567888877766654321
Q ss_pred CCCCch--hhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhccc
Q 015713 326 PLSNDF--GSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNSL 374 (402)
Q Consensus 326 ~~~~d~--~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~~ 374 (402)
.....+ ...++..+ ..++..+..++.|.||+||+||..|+..+..+.
T Consensus 183 ~~g~~~td~~~~~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~~ 231 (236)
T 1i52_A 183 NEGATITDEASALEYC--GFHPQLVEGRADNIKVTRPEDLALAEFYLTRTI 231 (236)
T ss_dssp HTTCCCCSHHHHHHHT--TCCCEEEECCTTCCCCCSHHHHHHHHHHHCC--
T ss_pred hcCCCcccHHHHHHHc--CCCEEEEecCccccccCCHHHHHHHHHHHHHhh
Confidence 111111 01223221 357878877788999999999999998776543
No 39
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.81 E-value=2.6e-19 Score=166.98 Aligned_cols=217 Identities=13% Similarity=0.146 Sum_probs=137.0
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
+++.|||||||.||||. +|+|+||+|+ |||+|+++.+..+| +++|+|++. .+.+.+++. .+
T Consensus 2 ~~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~~--~~~i~~~~~-~~-------- 63 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVSTD--HDEIENVAK-QF-------- 63 (229)
T ss_dssp CCEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEES--CHHHHHHHH-HT--------
T ss_pred CcEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEECC--hHHHHHHHH-Hc--------
Confidence 35789999999999993 5999999999 99999999999998 699999994 566666653 22
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSC 247 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~ 247 (402)
+ ++++........ + ..+..++|..++..+. ..+.|++++||. +.. .++.++++.|.+.+++.++.+
T Consensus 64 g---~~~~~~~~~~~~---~-~~~~~~~v~~al~~~~-----~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 64 G---AQVHRRSSETSK---D-SSTSLDAIVEFLNYHN-----EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp T---CEEEECCGGGSS---T-TCCHHHHHHHHHTTCT-----TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred C---CEEEeChhhhcC---C-CCcHHHHHHHHHHhcC-----CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 2 333322110000 0 1244588888876552 357899999999 444 568899999988888766665
Q ss_pred EEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC
Q 015713 248 VPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL 327 (402)
Q Consensus 248 ~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~ 327 (402)
.+..+ +..+++ .| + +..|.+++...... -| ..+.....+..++|+|+|+++.| +
T Consensus 132 ~~~~~--p~~~~v--~~--~-~~~~~~~~~~~~~~---~~-------~~~~~~~~~~~n~giY~~~~~~l---~------ 185 (229)
T 1qwj_A 132 VRRHQ--FRWSEI--QK--G-VREVTEPLNLNPAK---RP-------RRQDWDGELYENGSFYFAKRHLI---E------ 185 (229)
T ss_dssp EEECC--CEECCC--CS--S-TTCCCCBSSSBTTB---CC-------CTTTSCCEEEEEEEEEEEEHHHH---H------
T ss_pred eeccC--hhHhhc--cc--c-cccccccccccccc---cc-------CCCCCCceEEEeeEEEEEEHHHh---c------
Confidence 54332 333322 22 2 11122211100000 00 00000113677999999999987 1
Q ss_pred CCchhhccHHhhhcCCcEEEE-EEc-CeEEecCCHHHHHHHHhHhhcc
Q 015713 328 SNDFGSEIIPASVKDHNVQAF-LFN-DYWEDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 328 ~~d~~~~ii~~li~~~~v~a~-~~~-g~w~DIgtp~d~~~A~~~ll~~ 373 (402)
..+.....+ .+ ..+ ++|.|||||+||..|+..+...
T Consensus 186 ---------~~~~~g~~~-~~~~~~~~~~~dIdt~~Dl~~a~~~~~~~ 223 (229)
T 1qwj_A 186 ---------MGYLQGGKM-AYYEMRAEHSVDIDVDIDWPIAEQRVLRF 223 (229)
T ss_dssp ---------TTCSSCSSE-EEEECCGGGCCCHHHHCSHHHHHHHHHHH
T ss_pred ---------cccccCCeE-EEEECCcccccCCCCHHHHHHHHHHHHHh
Confidence 111222344 44 554 6899999999999999876643
No 40
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.79 E-value=1.1e-18 Score=157.68 Aligned_cols=187 Identities=14% Similarity=0.187 Sum_probs=130.0
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
+|.+||||||.||||. .||+|+|++|+ |||+|+++.+..+|+++|+|++++..+.+.+++.. ++
T Consensus 5 ~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~- 68 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL---------DG- 68 (199)
T ss_dssp CEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC---------TT-
T ss_pred ceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc---------CC-
Confidence 4889999999999994 69999999999 99999999999999999999999877666554421 12
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccC--CccHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLY--RMDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~--~~di~~~l~~h~~~~aditi~~~~ 249 (402)
+.++.... +..|++++++.++..++ ...+.++++.||+.+ ..++.++++. +.++++++.+.
T Consensus 69 --~~~~~~~~--------~~~g~~~~i~~al~~~~----~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~- 131 (199)
T 2waw_A 69 --LDIVLVDD--------AGLGCSSSLKSALTWVD----PTAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY- 131 (199)
T ss_dssp --SEEEECCC--------CCTTCCCHHHHHHHTSC----TTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE-
T ss_pred --CEEEECCC--------cccCHHHHHHHHHHhhh----ccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec-
Confidence 34443211 12589999999987662 135889999999954 4567888876 44555543221
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCCC
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN 329 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~~ 329 (402)
+|+ +.. + ++|+++.+..+... ..
T Consensus 132 ----------------~g~-------~~~-----------------------P-------~~~~~~~l~~~~~~--~~-- 154 (199)
T 2waw_A 132 ----------------ANG-------IGH-----------------------P-------FWVSRGVFGDLAEL--HG-- 154 (199)
T ss_dssp ----------------TTE-------EEE-----------------------E-------EEEEGGGHHHHHTC--SS--
T ss_pred ----------------CCc-------ccC-----------------------C-------EEEcHHHHHHHHhc--CC--
Confidence 111 000 1 47888888766532 11
Q ss_pred chhhccHHhhhcC--CcEEEEEE-cCeEEecCCHHHHHHHHhHhh
Q 015713 330 DFGSEIIPASVKD--HNVQAFLF-NDYWEDIGTIKSFFMPIWPSQ 371 (402)
Q Consensus 330 d~~~~ii~~li~~--~~v~a~~~-~g~w~DIgtp~d~~~A~~~ll 371 (402)
+. -+..++.+ .++..+.. .++|.||+||+||..++..+.
T Consensus 155 ~~---~~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~~ 196 (199)
T 2waw_A 155 DK---GVWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASVV 196 (199)
T ss_dssp TT---CHHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHHH
T ss_pred CH---HHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHHh
Confidence 11 12333333 46777777 458999999999999987653
No 41
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.79 E-value=4.3e-19 Score=160.96 Aligned_cols=130 Identities=25% Similarity=0.334 Sum_probs=94.3
Q ss_pred eeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCCC
Q 015713 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDG 172 (402)
Q Consensus 93 m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~ 172 (402)
|+|||||||.||||+| +||+|+|++|+ |||+|+++.+.++|+++|+|+++++.+.+.+++...|.+..
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~~~~------- 68 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYKDYK------- 68 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTTTTT-------
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhccCCC-------
Confidence 6899999999999987 89999999999 99999999999999999999999998889888876542211
Q ss_pred cEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc--cCCccHHHHHHHHHh-----CCCcEEE
Q 015713 173 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH--LYRMDYTEFLQKHID-----TKADITV 245 (402)
Q Consensus 173 ~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~--l~~~di~~~l~~h~~-----~~aditi 245 (402)
.+.++... ..|++++++.++..+ .+.|+++.||+ +....+.++++.|.+ .+.+.++
T Consensus 69 ~~~~~~~~----------~~g~~~si~~al~~~-------~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~ 131 (196)
T 3rsb_A 69 NIVVIDTS----------GKGYIEDLNECIGYF-------SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALA 131 (196)
T ss_dssp EEEE------------------CCCCCTTTTTC-------SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEE
T ss_pred CEEEEECC----------CCCcHHHHHHHHHhC-------CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEE
Confidence 14444321 147777887775443 48999999999 334678999999987 6667777
Q ss_pred EEEEcC
Q 015713 246 SCVPMD 251 (402)
Q Consensus 246 ~~~~~~ 251 (402)
.+.+..
T Consensus 132 ~~~p~~ 137 (196)
T 3rsb_A 132 VMIPKE 137 (196)
T ss_dssp EEEETT
T ss_pred EEEEcc
Confidence 777764
No 42
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.78 E-value=1.2e-18 Score=157.31 Aligned_cols=186 Identities=16% Similarity=0.238 Sum_probs=126.0
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
+|.+||||||.||||. .||+|+|++|+ |||+|+++.+..+|+++|+|++++..+.+.+++.. ++
T Consensus 5 ~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~---------~~- 68 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL---------DG- 68 (197)
T ss_dssp EEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC---------TT-
T ss_pred ceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc---------CC-
Confidence 4789999999999993 79999999999 99999999999999999999999876666554421 12
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~~~ 249 (402)
+.++.... +..|++++++.++..+. ...+.++++.||+ +.. ..+.++++. +.++++++.+.
T Consensus 69 --~~~~~~~~--------~~~g~~~~i~~al~~~~----~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~- 131 (197)
T 2wee_A 69 --TDVVVVED--------VERGCAASLRVALARVH----PRATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY- 131 (197)
T ss_dssp --SEEEECC------------CCHHHHHHHHTTSC----TTEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE-
T ss_pred --CEEEECCC--------cccCHHHHHHHHHHHhc----ccCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec-
Confidence 34443211 22589999999986652 1247899999999 444 457788876 44455432211
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCCC
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN 329 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~~ 329 (402)
+|+ +.. + ++|+++.|..+.. .. .
T Consensus 132 ----------------~g~-------~~~-----------------------P-------~~~~~~~l~~l~~--~~--~ 154 (197)
T 2wee_A 132 ----------------ADG-------VGH-----------------------P-------FWFSRTVFGELAR--LH--G 154 (197)
T ss_dssp ----------------TTE-------EEE-----------------------E-------EEEEGGGHHHHHT--CC--S
T ss_pred ----------------CCC-------cCC-----------------------C-------EEECHHHHHHHHh--CC--C
Confidence 111 000 1 3788888876652 11 1
Q ss_pred chhhccHHhhhcC--CcEEEEEE-cCeEEecCCHHHHHHHHhHh
Q 015713 330 DFGSEIIPASVKD--HNVQAFLF-NDYWEDIGTIKSFFMPIWPS 370 (402)
Q Consensus 330 d~~~~ii~~li~~--~~v~a~~~-~g~w~DIgtp~d~~~A~~~l 370 (402)
+ .-+..++.. .++..+.. .++|.||+||+||..++..+
T Consensus 155 ~---~~~~~~l~~~~~~v~~v~~~~~~~~dIdtpeDl~~~~~~~ 195 (197)
T 2wee_A 155 D---KGVWKLVHSGRHPVRELAVDGCVPLDVDTWDDYRRLLESV 195 (197)
T ss_dssp T---THHHHHHHCTTSCEEEEECSSCCCCCCSSHHHHHHHHTC-
T ss_pred C---hhHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHh
Confidence 1 112334444 35777776 45899999999999987643
No 43
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.77 E-value=8.8e-18 Score=172.52 Aligned_cols=253 Identities=12% Similarity=0.137 Sum_probs=166.7
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecC-CcchHHHHHHHHhHhC----C--CCeEEEEccCCchhHHHHHHhhccC
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIG-GNYRLIDIPMSNCINS----G--FNKIFIMTQFNSFSLNRHLARSYNL 163 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIg-G~~pLId~~i~~l~~~----G--I~~IiVv~~~~~~~i~~~l~~~y~~ 163 (402)
.+|.+||||||.|||| +...||||+||+ |+ |++++.++.+... | |.-+++...+..+.+.+|+.+.-
T Consensus 78 ~k~~vviLAGGlGTRL---g~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~-- 151 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTM---GCTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYT-- 151 (469)
T ss_dssp TTEEEEEEECCBSGGG---TCCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGT--
T ss_pred ccceEEEEcCCccccC---CCCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcc--
Confidence 5799999999999999 568999999999 88 9999999999887 5 66666666677899999987421
Q ss_pred CCCcccCCCcEEEEeccc-------------CCC--cCCccccCChHHHHHHHH--HHHHhhhcCCCceEEEEcCCccCC
Q 015713 164 GNGVNFGDGFVEVLAATQ-------------TPG--EAGKKWFQGTADAVRQFI--WVFEDAKNKNVENVLILSGDHLYR 226 (402)
Q Consensus 164 ~~g~~~~~~~V~vl~~~q-------------~~~--~~g~~~~~Gta~Al~~~~--~~l~~~~~~~~e~~Lvl~gD~l~~ 226 (402)
.||. .|.++.... ... ..-...+.||+++++... ..+++....+.++|+|+++|.+..
T Consensus 152 ----~fG~-~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~ 226 (469)
T 2icy_A 152 ----NSNV-DIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGA 226 (469)
T ss_dssp ----TSSS-CEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTC
T ss_pred ----cCCc-eEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCc
Confidence 2332 244321110 000 000123579999997642 112222223579999999999987
Q ss_pred ccHHHHHHHHHhCCCcEEEEEEEcCCCCCCcceEEEECCCCc--EEEEEecCCCCCCCCcccccccccCCCCCCCCCCce
Q 015713 227 MDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDRSGQ--IIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYI 304 (402)
Q Consensus 227 ~di~~~l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD~~g~--V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~ 304 (402)
.....++.+|.++++++++.+.+..+. ...||++... +|+ ++++.|+|...... .-| . . ....
T Consensus 227 ~~d~~ll~~~~~~~a~~t~~v~~k~~~-~~~~Gvl~~~-dg~~~vvE~~e~p~~~~~e--~k~--~--------~-~~~~ 291 (469)
T 2icy_A 227 IVDLTILKHLIQNKNEYCMEVTPKTLA-DVKGGTLISY-EGKVQLLEIAQVPDEHVNE--FKS--I--------E-KFKI 291 (469)
T ss_dssp CCCHHHHHHHHHHTCSEEEEEEECCTT-CCSSCEEEEE-TTEEEEECGGGSCGGGHHH--HHS--S--------S-SCCE
T ss_pred ccCHHHHHHHHHcCCCeeEEEEEeccC-CCceeEEEEE-CCEEEEEEEeccChhhhhh--hcc--c--------c-ccce
Confidence 543479999999999999999887541 2468887642 455 55555665431000 000 0 0 1245
Q ss_pred eeeeEEEEehHHHHHHHHhhC---CC--------------CCchhhccHHhhhcCCcEEEEEE-cCeEEecCCHHHHHHH
Q 015713 305 ASMGVYLFRTDVLLNLLRSSY---PL--------------SNDFGSEIIPASVKDHNVQAFLF-NDYWEDIGTIKSFFMP 366 (402)
Q Consensus 305 ~~~Giyvf~~~~l~~ll~~~~---~~--------------~~d~~~~ii~~li~~~~v~a~~~-~g~w~DIgtp~d~~~A 366 (402)
.++|+|+|++++|.++++... +. -..++.++++.. .+..++.. ..+|.++.++.|++.+
T Consensus 292 ~N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~~---~~~~~~~V~R~~F~PvKn~~dll~~ 368 (469)
T 2icy_A 292 FNTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFF---DNAIGVNVPRSRFLPVKASSDLLLV 368 (469)
T ss_dssp EEEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGS---TTCEEEECCGGGCCBCCSHHHHHHH
T ss_pred eeEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHhc---CCeEEEEechhHcCcCCCHHHHHHH
Confidence 699999999999998876521 10 011233444322 34556644 4589999999999999
Q ss_pred HhHhhc
Q 015713 367 IWPSQN 372 (402)
Q Consensus 367 ~~~ll~ 372 (402)
+..+..
T Consensus 369 ~s~l~~ 374 (469)
T 2icy_A 369 QSDLYT 374 (469)
T ss_dssp HSTTEE
T ss_pred HHHHHH
Confidence 998554
No 44
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.76 E-value=8.8e-18 Score=157.52 Aligned_cols=206 Identities=12% Similarity=0.073 Sum_probs=127.9
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
++.|||||||.||||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++ .+.+ +. . .
T Consensus 25 ~~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~---~~~~-~~------~---~-- 82 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPP---GAEP-PK------G---L-- 82 (236)
T ss_dssp CCEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECT---TCCC-CT------T---C--
T ss_pred ceEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCH---HHHH-hh------c---C--
Confidence 45699999999999974 3 9999999999 999999999 7789999999985 1111 11 0 1
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~~~ 249 (402)
.+.++.. . .|..++++.++..++ .+.+++++||+ ++. ..+..+++.+.+.+ ..+.+.+
T Consensus 83 -~v~~~~~--~---------~~~~~~i~~al~~~~------~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~ 142 (236)
T 2px7_A 83 -GAVFLEG--G---------ATRQASVARLLEAAS------LPLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLP 142 (236)
T ss_dssp -SCEEEEC--C---------SSHHHHHHHHHHHCC------SSEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEE
T ss_pred -CcEEEeC--C---------CchHHHHHHHHHHcC------CCeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEe
Confidence 1344321 1 267899998876652 47899999998 545 45788888876653 3444555
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCCC
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN 329 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~~ 329 (402)
..+ .. ...+ +|++..+.++.. .+.+. ..++|+++.|..+++.......
T Consensus 143 ~~~--~~----~~~~-~G~v~~~~~~~~------------------------~~~~~-~~~~f~~~~l~~~~~~~~~~g~ 190 (236)
T 2px7_A 143 VPD--TL----MAPE-GEAYGRVVPREA------------------------FRLVQ-TPQGFFTALLREAHAYARRKGL 190 (236)
T ss_dssp CCS--EE----EEEC-SSSCEEEECGGG------------------------CEEEC-SCEEEEHHHHHHHHHHHHHHTC
T ss_pred cCC--cE----EEec-CCeEEecCChHh------------------------hcccc-CCeEEcHHHHHHHHHHHHhcCC
Confidence 432 11 1124 788876655311 01122 3567888877665543211000
Q ss_pred ch--hhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhcc
Q 015713 330 DF--GSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 330 d~--~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~ 373 (402)
.+ ...++... ..++..+..++.|.|||||+||..|+..+..+
T Consensus 191 ~~~d~~~ll~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~~ 234 (236)
T 2px7_A 191 EASDDAQLVQAL--GYPVALVEGEATAFKITHPQDLVLAEALARVW 234 (236)
T ss_dssp CCSSHHHHHHHT--TCCCEEEECCTTCCCCCSHHHHHHHHHHHTC-
T ss_pred CchhHHHHHHHc--CCcEEEEECCccccCCCCHHHHHHHHHHHHhc
Confidence 00 12223221 35788888888999999999999998876543
No 45
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.76 E-value=3.7e-17 Score=152.05 Aligned_cols=215 Identities=15% Similarity=0.221 Sum_probs=137.7
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCchhHHHHHHhhccCCCCcccC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNSFSLNRHLARSYNLGNGVNFG 170 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~ 170 (402)
.|.|||||||.||||+ ...||+|+|++|+ |||+|+++.+..+| +++|+|++++..+.+ +. .+ +. ++
T Consensus 13 ~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~---~~-~~-~~----~~ 79 (234)
T 1vpa_A 13 MNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEV---VE-KR-VF----HE 79 (234)
T ss_dssp CEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHH---HH-TT-CC----CT
T ss_pred cCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHH---HH-HH-hc----cC
Confidence 4789999999999996 3469999999999 99999999999998 999999999865432 22 11 11 11
Q ss_pred CCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEEEE
Q 015713 171 DGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVSCV 248 (402)
Q Consensus 171 ~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~~~ 248 (402)
. .+... .. | .+..++++.++..+++ ...+.+++++||. +.. ..+.++++.+.+.+ ..+++.
T Consensus 80 ~-~~~~~--~g-----g----~~~~~sv~~al~~~~~---~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~~~ 142 (234)
T 1vpa_A 80 K-VLGIV--EG-----G----DTRSQSVRSALEFLEK---FSPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATLAL 142 (234)
T ss_dssp T-EEEEE--EC-----C----SSHHHHHHHHHHHHGG---GCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEEEE
T ss_pred C-ceEEe--CC-----C----CcHHHHHHHHHHHhhh---cCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEEEE
Confidence 1 12211 10 0 1378899998877741 0236788899999 555 45788888876654 334455
Q ss_pred EcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCC
Q 015713 249 PMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLS 328 (402)
Q Consensus 249 ~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~ 328 (402)
+..+ ++..++++| | .+.++.. .+..-.-++|+.+.+..++.......
T Consensus 143 ~~~~------~~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~~~~~ 189 (234)
T 1vpa_A 143 KNSD------ALVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENGGEWA 189 (234)
T ss_dssp ECCS------EEEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTCCCCS
T ss_pred ecCC------cEEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhcCCCC
Confidence 5432 122345567 6 5554310 11112345889888877665421001
Q ss_pred CchhhccHHhhhcCCcEEEEEEcCeEEecCCHHHHHHHHhHhhcc
Q 015713 329 NDFGSEIIPASVKDHNVQAFLFNDYWEDIGTIKSFFMPIWPSQNS 373 (402)
Q Consensus 329 ~d~~~~ii~~li~~~~v~a~~~~g~w~DIgtp~d~~~A~~~ll~~ 373 (402)
. ...++... ..++..+..++.|.|||||+||..|+..+.++
T Consensus 190 ~--~~~~~~~~--g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~~~ 230 (234)
T 1vpa_A 190 D--DTEPVQKL--GVKIALVEGDPLCFKVTFKEDLELARIIAREW 230 (234)
T ss_dssp S--SHHHHHTT--TCCCEEEECCGGGCCCCSTTHHHHHHHHHHHH
T ss_pred c--HHHHHHHc--CCcEEEEECCchhcCCCCHHHHHHHHHHHhcc
Confidence 1 01222221 34677777677899999999999998866543
No 46
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.72 E-value=2.9e-16 Score=147.44 Aligned_cols=217 Identities=18% Similarity=0.167 Sum_probs=147.5
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCC-CCeEEEEccCCc-hhHHHHHHhhccCCCCccc
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSG-FNKIFIMTQFNS-FSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~G-I~~IiVv~~~~~-~~i~~~l~~~y~~~~g~~~ 169 (402)
.+.+||||||.||||. ...||+|+|++|+ |||+|+++.+..++ +++|+|++++.. +.+.+++..
T Consensus 7 ~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~---------- 72 (231)
T 3q80_A 7 EVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH---------- 72 (231)
T ss_dssp CEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG----------
T ss_pred ceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC----------
Confidence 4789999999999995 4679999999999 99999999999874 999999998765 334333321
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCCc-cHHHHHHHHHhCCCcEEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYRM-DYTEFLQKHIDTKADITVSC 247 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~~-di~~~l~~h~~~~aditi~~ 247 (402)
.+.++... .+..++++.++..+.+. ...+.++|+.||. +... .+.++++.+.+ +.+..+.+
T Consensus 73 ---~v~~v~gg-----------~~r~~sv~~gl~~~~~~--~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~ 135 (231)
T 3q80_A 73 ---RAMIVAGG-----------SNRTDTVNLALTVLSGT--AEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPV 135 (231)
T ss_dssp ---GCEEEECC-----------SSHHHHHHHHHGGGC-----CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEE
T ss_pred ---CeEEEcCC-----------CchHHHHHHHHHHhhhc--CCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEE
Confidence 13444311 13578999988776420 1247899999999 5554 47888888765 34566777
Q ss_pred EEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC
Q 015713 248 VPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL 327 (402)
Q Consensus 248 ~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~ 327 (402)
.++.+ +- ...|++|.|.++.+. .. -+.+.+ -++|+.+.|.+.++.....
T Consensus 136 ~p~~d--t~----~~~~~~g~v~~~~~r---~~---------------------l~~~qT-Pq~F~~~~L~~a~~~~~~~ 184 (231)
T 3q80_A 136 LPLSD--TI----KAVDANGVVLGTPER---AG---------------------LRAVQT-PQGFTTDLLLRSYQRGSLD 184 (231)
T ss_dssp ECCSS--CE----EEECTTSBEEECCCG---GG---------------------EEEECS-CEEEEHHHHHHHHHHHTC-
T ss_pred EeccC--CE----EEEcCCCcEEEecch---hh---------------------eEEEcC-CcEEEHHHHHHHHHHHHhh
Confidence 77765 22 224777888765432 11 133343 5899999988877654321
Q ss_pred -CCchhhccHHhhhc-CCcEEEEEEcCeEEecCCHHHHHHHHhHh
Q 015713 328 -SNDFGSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFMPIWPS 370 (402)
Q Consensus 328 -~~d~~~~ii~~li~-~~~v~a~~~~g~w~DIgtp~d~~~A~~~l 370 (402)
...+.+|....+.. ..+|..+.-+..++.|.||+||..|+..+
T Consensus 185 n~~~~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 185 LPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp ----CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 11223444444433 35777777666799999999999999865
No 47
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.69 E-value=7.1e-17 Score=147.72 Aligned_cols=180 Identities=13% Similarity=0.086 Sum_probs=113.4
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
|+++.+||||||.||||+ .||+|+|++|+ |||+|+++.+..+ +++|+|++++..+ ++ + .
T Consensus 12 ~~~~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~----~--~----- 70 (201)
T 2e8b_A 12 SKVNTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FS----F--L----- 70 (201)
T ss_dssp CSCCEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GG----G--G-----
T ss_pred ccCceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hh----c--C-----
Confidence 445789999999999995 79999999999 9999999999988 9999999987654 11 1 1
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccC-Ccc-HHH-HHHHHHhCCCcEEEE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLY-RMD-YTE-FLQKHIDTKADITVS 246 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~-~~d-i~~-~l~~h~~~~aditi~ 246 (402)
+ ++++.... +..|++++|+.++..+. .+.++|++||+.+ ..+ +.. ++ . .++++.
T Consensus 71 ~---~~~v~~~~--------~~~g~~~~i~~al~~~~------~~~~lv~~~D~P~i~~~~i~~~l~----~--~~~~v~ 127 (201)
T 2e8b_A 71 N---APVVLDEF--------EESASIIGLYTALKHAK------EENVFVLSGDLPLMKKETVLYVLE----N--FKEPVS 127 (201)
T ss_dssp T---CCEEECCC--------SSCCHHHHHHHHHHHCS------SSEEEEEETTCTTCCHHHHHHHHH----T--CCSSEE
T ss_pred C---ceEEecCC--------CCCCcHHHHHHHHHHcC------CCCEEEEeCCcCcCCHHHHHHHHh----c--CCEEEE
Confidence 1 33433221 12599999999987662 4889999999944 544 455 54 1 222111
Q ss_pred EEEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCC
Q 015713 247 CVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYP 326 (402)
Q Consensus 247 ~~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~ 326 (402)
.. +|+ .....|+| |+++++..+......
T Consensus 128 ---------------~~--~g~----------------------------------~~p~~giy-~~~~~~~~l~~~~~~ 155 (201)
T 2e8b_A 128 ---------------VA--KTE----------------------------------KLHTLVGV-YSKKLLEKIEERIKK 155 (201)
T ss_dssp ---------------EE--ESS----------------------------------SEEEEEEE-EEGGGHHHHHHHHHT
T ss_pred ---------------ec--CCc----------------------------------eeeEEEEE-eChhHHHHHHHHHHc
Confidence 00 110 13457999 999977655331111
Q ss_pred CCCchhhccHHhhhcCCcEEEEEEc--CeEE--ecCCHHHHHHHHhHh
Q 015713 327 LSNDFGSEIIPASVKDHNVQAFLFN--DYWE--DIGTIKSFFMPIWPS 370 (402)
Q Consensus 327 ~~~d~~~~ii~~li~~~~v~a~~~~--g~w~--DIgtp~d~~~A~~~l 370 (402)
+ .....+++.. .++..+.++ +.|. |||||+||.+++..+
T Consensus 156 g-~~~~~~~l~~----~~~~~~~~~~~~~~~~~dintpedl~~~~~~~ 198 (201)
T 2e8b_A 156 G-DYRIWALLKD----VGYNEVEIPEELRYTLLNMNTKEDLKRILAIE 198 (201)
T ss_dssp T-CCCHHHHHHH----HCCEEEECCGGGGGGGCCSCCC----------
T ss_pred C-CchHHHHHHH----CCeEEeccccccchhhcCCCCHHHHHHHHHHh
Confidence 1 1223444444 356666664 4799 999999999987654
No 48
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1e-15 Score=157.94 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=157.7
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecC-CcchHHHHHHHHhHhC----CCC-eEEEEcc-CCchhHHHHHHhhcc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIG-GNYRLIDIPMSNCINS----GFN-KIFIMTQ-FNSFSLNRHLARSYN 162 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIg-G~~pLId~~i~~l~~~----GI~-~IiVv~~-~~~~~i~~~l~~~y~ 162 (402)
-.++.+||||||.||||+ ...||+|+||+ |+ ||++|+++.+... |+. .++|+++ +..+.+.+++.+..
T Consensus 90 ~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~- 164 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYS- 164 (488)
T ss_dssp GGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGC-
T ss_pred cCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhcc-
Confidence 457889999999999995 67899999999 98 9999999999876 533 3666666 88899999886421
Q ss_pred CCCCcccCCCcEEEEecccC-----------C-CcC----Cc-cccCChHHHHHHHH--HHHHhhhcCCCceEEEEcCCc
Q 015713 163 LGNGVNFGDGFVEVLAATQT-----------P-GEA----GK-KWFQGTADAVRQFI--WVFEDAKNKNVENVLILSGDH 223 (402)
Q Consensus 163 ~~~g~~~~~~~V~vl~~~q~-----------~-~~~----g~-~~~~Gta~Al~~~~--~~l~~~~~~~~e~~Lvl~gD~ 223 (402)
.||. .|.++ .|. . ... .. ..+.||++++.... ..++.......++++|++||.
T Consensus 165 -----~fg~-~i~~f--~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDn 236 (488)
T 2i5k_A 165 -----ANRI-RIRSF--NQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDN 236 (488)
T ss_dssp -----SSSC-EEEEE--CCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTB
T ss_pred -----ccCc-eEEEE--EeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCc
Confidence 1222 13322 222 0 000 01 23579999998331 112222123578999999999
Q ss_pred cCC-ccHHHHHHHHHhCCCcEEEEEEEcCCCCCC-cceEEEECCCCcEEEEEe---cCCCCCCCCcccccccccCCCCCC
Q 015713 224 LYR-MDYTEFLQKHIDTKADITVSCVPMDDCRAS-DYGLMKIDRSGQIIQFAE---KPKGPDLKGMQCDTTLLGLSMPDA 298 (402)
Q Consensus 224 l~~-~di~~~l~~h~~~~aditi~~~~~~~~~~~-~~g~v~iD~~g~V~~~~E---Kp~~~~~~~~~v~~~~~~~~~~~a 298 (402)
+.. .|+. ++..|.++++++++.+.+..+ +. .||.+..+ +|+ ..+.| .+..... ..+ +.
T Consensus 237 L~~~~d~~-~L~~~~~~~a~~t~~v~~~~~--p~~~yG~Iv~~-dG~-~~iVE~~e~~~e~~~---~~~---------~~ 299 (488)
T 2i5k_A 237 LGATVDLK-ILNHMIETGAEYIMELTDKTR--ADVKGGTLISY-DGQ-VRLLEVAQVPKEHID---EFK---------NI 299 (488)
T ss_dssp SSCCCCHH-HHHHHHHSCCSEEEEEEECCG--GGSSSCEEEEE-TTE-EEEECGGGSCTTSHH---HHT---------CT
T ss_pred CCCcccHH-HHHHHHhcCCcEEEEEEEecC--CCCceeEEEEE-CCc-EEEEEeccCCHHHHh---hcc---------cc
Confidence 886 5775 668899999999999887754 44 49987654 566 34444 3322100 000 00
Q ss_pred CCCCceeeeeEEEEehHHHHHHHHhhC---CC-----C-------------CchhhccHHhhhcCCcEEEEEE-cCeEEe
Q 015713 299 VKFPYIASMGVYLFRTDVLLNLLRSSY---PL-----S-------------NDFGSEIIPASVKDHNVQAFLF-NDYWED 356 (402)
Q Consensus 299 ~~~~~~~~~Giyvf~~~~l~~ll~~~~---~~-----~-------------~d~~~~ii~~li~~~~v~a~~~-~g~w~D 356 (402)
. .-...++|+|+|+.+.|.++++... +. . ..++.++++.+ + +..++.. ...|..
T Consensus 300 ~-~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~-~--~~~~~~V~R~~F~P 375 (488)
T 2i5k_A 300 R-KFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF-D--GAHGVVVPRSRFLP 375 (488)
T ss_dssp T-TCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGS-S--SCEEEEECGGGCCB
T ss_pred c-ccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhc-c--CceEEEeccccccc
Confidence 0 1235799999999999998877521 10 0 12333444433 1 2333333 236888
Q ss_pred cCCHHHHHHHHhHhhc
Q 015713 357 IGTIKSFFMPIWPSQN 372 (402)
Q Consensus 357 Igtp~d~~~A~~~ll~ 372 (402)
+.+..+++-++..+..
T Consensus 376 vKn~~~ll~~~~~~~~ 391 (488)
T 2i5k_A 376 VKTCSDLLLVKSDLFR 391 (488)
T ss_dssp CCSHHHHHHHTSTTEE
T ss_pred ccCCccHHHHHHHHHH
Confidence 9898888777665544
No 49
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.68 E-value=1.2e-16 Score=145.68 Aligned_cols=183 Identities=15% Similarity=0.163 Sum_probs=113.5
Q ss_pred CeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCC
Q 015713 92 NVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGD 171 (402)
Q Consensus 92 ~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~ 171 (402)
+|.+||||||.||||+ .||+|+|++|+ |||+|+++.+..+ +|+|+++++.+.+.+++ . .+
T Consensus 2 ~~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~------~----~~- 61 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEMLPLL------M----DQ- 61 (197)
T ss_dssp CEEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHGGGC------T----TS-
T ss_pred ceEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHHHHh------c----CC-
Confidence 4789999999999995 39999999999 9999999999887 89999988654443221 1 12
Q ss_pred CcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCCc-cHHHHHHHHHhCCCcEEEEEEE
Q 015713 172 GFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYRM-DYTEFLQKHIDTKADITVSCVP 249 (402)
Q Consensus 172 ~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~~-di~~~l~~h~~~~aditi~~~~ 249 (402)
+ ++... .|..|++++|+.++..+. ..+.++++.||+ +... .+.++++.+ +.++++++.+.
T Consensus 62 --~-~v~~~--------~~~~G~~~si~~al~~~~-----~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~- 123 (197)
T 3d5n_A 62 --I-VIYNP--------FWNEGISTSLKLGLRFFK-----DYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH- 123 (197)
T ss_dssp --C-EEECT--------TGGGCHHHHHHHHHHHTT-----TSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE-
T ss_pred --E-EEECC--------CCCCCHHHHHHHHHHhhc-----cCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe-
Confidence 3 33321 123599999999987764 237899999999 5554 467888776 55555543321
Q ss_pred cCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCCC
Q 015713 250 MDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSN 329 (402)
Q Consensus 250 ~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~~ 329 (402)
+|+ +.. + .+|+++.+..+... ....
T Consensus 124 ----------------~g~-------~~~-----------------------P-------~~~~~~~l~~l~~l--~g~~ 148 (197)
T 3d5n_A 124 ----------------KGE-------RGN-----------------------P-------VLISKSLFNEIEKL--RGDV 148 (197)
T ss_dssp ----------------TTE-------ECS-----------------------C-------EEEEHHHHHHHHHC--CTTC
T ss_pred ----------------CCc-------ccC-----------------------C-------EEECHHHHHHHHcc--CCCc
Confidence 110 000 1 27888888766521 2211
Q ss_pred chhhccHHhhhcC--CcEEEEEEc--CeEEecCCHHHHHHHHhHhhc
Q 015713 330 DFGSEIIPASVKD--HNVQAFLFN--DYWEDIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 330 d~~~~ii~~li~~--~~v~a~~~~--g~w~DIgtp~d~~~A~~~ll~ 372 (402)
.+ ..++.. .++..+..+ +.|.||+||+||..++..+..
T Consensus 149 ----~~-~~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~~~ 190 (197)
T 3d5n_A 149 ----GA-RVILNKIKIEELCFIECSEGVLIDIDKKEDLMRLRDFHPL 190 (197)
T ss_dssp ----CT-HHHHTTSCGGGEEEEECCGGGTCCTTTC------------
T ss_pred ----cH-HHHHHhCccCeEEEEcCCCCcccCCCCHHHHHHHHHhhcc
Confidence 11 222333 346666664 478999999999998876543
No 50
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.67 E-value=1.7e-15 Score=156.96 Aligned_cols=210 Identities=15% Similarity=0.202 Sum_probs=141.1
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceec---CCcchHHHHHHHHhHh--------CC----CCeEEEEccCCchhHHH
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPI---GGNYRLIDIPMSNCIN--------SG----FNKIFIMTQFNSFSLNR 155 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpI---gG~~pLId~~i~~l~~--------~G----I~~IiVv~~~~~~~i~~ 155 (402)
.+|.+||||||.|||| +...||+|+|| .|+ |+|+++++.+.. .| |..+++...+..+.+.+
T Consensus 101 ~kvavViLAGG~GTRL---g~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~ 176 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRL---GVAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKE 176 (505)
T ss_dssp TCEEEEEECCCCCCTT---SCSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHH
T ss_pred CceEEEEEcCCccccC---CCCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHH
Confidence 5699999999999999 46799999999 688 999999999876 36 77888888888999999
Q ss_pred HHHhhccCCCCcccCCCcEEEEeccc-----CCCc------CC-ccccCChHHHHHHHHH--HHHhhhcCCCceEEEEcC
Q 015713 156 HLARSYNLGNGVNFGDGFVEVLAATQ-----TPGE------AG-KKWFQGTADAVRQFIW--VFEDAKNKNVENVLILSG 221 (402)
Q Consensus 156 ~l~~~y~~~~g~~~~~~~V~vl~~~q-----~~~~------~g-~~~~~Gta~Al~~~~~--~l~~~~~~~~e~~Lvl~g 221 (402)
++.+.-.|+- ....|.++.... ..+. .. ...+.||++.+..... .+++....+.++|+|+++
T Consensus 177 ~f~~~~~fGl----~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~ 252 (505)
T 1jv1_A 177 FFTKHKYFGL----KKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCV 252 (505)
T ss_dssp HHHHTGGGGS----CGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEET
T ss_pred HHHhhhhcCC----CcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEEC
Confidence 9974211321 111233222100 0000 00 0135699999876643 233222235699999999
Q ss_pred Ccc-CCccHHHHHHHHHhCCCcEEEEEEE-cCCCCCCcceEEEECCCCcE--EEEEecCCCCCCCCcccccccccCCCCC
Q 015713 222 DHL-YRMDYTEFLQKHIDTKADITVSCVP-MDDCRASDYGLMKIDRSGQI--IQFAEKPKGPDLKGMQCDTTLLGLSMPD 297 (402)
Q Consensus 222 D~l-~~~di~~~l~~h~~~~aditi~~~~-~~~~~~~~~g~v~iD~~g~V--~~~~EKp~~~~~~~~~v~~~~~~~~~~~ 297 (402)
|.+ ...+...++..|..+++++++.+.+ ..+ ...+|++..+ +|++ +++.|+|..... ..| +.
T Consensus 253 Dn~L~~~~d~~~lg~~~~~~~~~~~~v~~k~~~--~e~~Gvl~~~-dg~~~vvEy~E~p~~~~~---~~~-------~~- 318 (505)
T 1jv1_A 253 DNILVKVADPRFIGFCIQKGADCGAKVVEKTNP--TEPVGVVCRV-DGVYQVVEYSEISLATAQ---KRS-------SD- 318 (505)
T ss_dssp TBTTCCTTCHHHHHHHHHTTCSEEEEEEECCST--TCSCCEEEEE-TTEEEEECGGGSCHHHHH---CBC-------TT-
T ss_pred CccccccchHHHHHHHHHcCCCEEEEEEEccCC--ccCcceEEEE-CCeEEEEEEeeCCHHHhh---hcc-------cc-
Confidence 995 7777778999999999999999887 433 6788988764 4554 555555542100 000 00
Q ss_pred CCCCCceeeeeEEEEehHHHHHHHH
Q 015713 298 AVKFPYIASMGVYLFRTDVLLNLLR 322 (402)
Q Consensus 298 a~~~~~~~~~Giyvf~~~~l~~ll~ 322 (402)
-....+.+++|+|+|+.++|.++.+
T Consensus 319 g~~~~~~~N~~~~~f~l~~L~~i~~ 343 (505)
T 1jv1_A 319 GRLLFNAGNIANHFFTVPFLRDVVN 343 (505)
T ss_dssp SSBSSCEEEEEEEEEEHHHHHHHHH
T ss_pred cccccceeeEEEEEecHHHHHHHHH
Confidence 0011357899999999999988865
No 51
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.66 E-value=1.5e-15 Score=139.05 Aligned_cols=117 Identities=12% Similarity=0.166 Sum_probs=86.4
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCccc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNF 169 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~ 169 (402)
|++|.+||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|++++..+.+ . .+
T Consensus 4 mm~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~----~-~~-------- 64 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIY----Q-AS-------- 64 (201)
T ss_dssp CCSEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHH----H-TT--------
T ss_pred CCcceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHH----h-hc--------
Confidence 567999999999999996 379999999999 999999999985 6999999998865322 1 11
Q ss_pred CCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCCc-cHHHHHHHHHhCCCcE
Q 015713 170 GDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYRM-DYTEFLQKHIDTKADI 243 (402)
Q Consensus 170 ~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~~-di~~~l~~h~~~~adi 243 (402)
+ +.++..... + ..|++++|+.++..++ .+.++|+.||+ +... .+..+++. ..++++
T Consensus 65 ~---~~~v~~~~~-~------~~G~~~si~~~l~~~~------~~~vlv~~~D~P~i~~~~i~~l~~~--~~~~~~ 122 (201)
T 1e5k_A 65 G---LKVIEDSLA-D------YPGPLAGMLSVMQQEA------GEWFLFCPCDTPYIPPDLAARLNHQ--RKDAPV 122 (201)
T ss_dssp S---CCEECCCTT-C------CCSHHHHHHHHHHHCC------SSEEEEEETTCTTCCTTHHHHHHHT--CTTCSE
T ss_pred C---CeEEecCCC-C------CCCHHHHHHHHHHhCC------CCcEEEEeCCcCcCCHHHHHHHHhh--cCCCCE
Confidence 2 334332211 0 1489999999987763 47899999999 5554 46777765 344444
No 52
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.56 E-value=8.9e-14 Score=128.30 Aligned_cols=186 Identities=14% Similarity=0.132 Sum_probs=120.4
Q ss_pred eeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCCC
Q 015713 93 VAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDG 172 (402)
Q Consensus 93 m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~ 172 (402)
|.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +|+|++++ .+.+ +.+.+.+ +
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~-~~~~~~~--------~-- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQA-EKLSSRY--------E-- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHH-HHHHTTS--------C--
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHH-HHHHHhc--------C--
Confidence 689999999999995 79999999999 9999999999887 99999974 2333 3333222 2
Q ss_pred cEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCCcc-HHHHHHHHHhCCCcEEEEEEEc
Q 015713 173 FVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYRMD-YTEFLQKHIDTKADITVSCVPM 250 (402)
Q Consensus 173 ~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~~d-i~~~l~~h~~~~aditi~~~~~ 250 (402)
+.++..... -.|..++|+.++..+ .+.+ |+.||+ +...+ +..+++.+.+.++++++..
T Consensus 60 -~~~v~d~~~--------~~G~~~si~~gl~~~-------~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~--- 119 (208)
T 3ngw_A 60 -AEFIWDLHK--------GVGSIAGIHAALRHF-------GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK--- 119 (208)
T ss_dssp -SCEECCTTC--------CCSHHHHHHHHHHHH-------SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE---
T ss_pred -CeEEecCCC--------CCChHHHHHHHHHHc-------CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc---
Confidence 334432221 148889999998766 2678 999999 55554 6778877765566654432
Q ss_pred CCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCCCc
Q 015713 251 DDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSND 330 (402)
Q Consensus 251 ~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~~d 330 (402)
+ |+. .| - +-+++++.+..+......+..
T Consensus 120 ~---------------g~~-----~P--------------------------l-----~al~~~~~~~~l~~~l~~G~~- 147 (208)
T 3ngw_A 120 H---------------DYP-----EP--------------------------L-----LAYYAESAADELERAILQGIR- 147 (208)
T ss_dssp S---------------SSB-----CT--------------------------T-----EEEECGGGHHHHHHHHHTTCC-
T ss_pred C---------------CCe-----eE--------------------------E-----EEEEcHHHHHHHHHHHHcCCC-
Confidence 1 110 01 0 124566655544332111111
Q ss_pred hhhccHHhhhcCCcEEEEEEc---------CeEEecCCHHHHHHHHhHhhcccC
Q 015713 331 FGSEIIPASVKDHNVQAFLFN---------DYWEDIGTIKSFFMPIWPSQNSLR 375 (402)
Q Consensus 331 ~~~~ii~~li~~~~v~a~~~~---------g~w~DIgtp~d~~~A~~~ll~~~~ 375 (402)
-+..++.+.++..+.+. +.|.||+||+||..+++.+..+..
T Consensus 148 ----~~~~~l~~~~~~~v~~~~~~~~d~~~~~~~ninTpeDl~~~~~~~~~~~~ 197 (208)
T 3ngw_A 148 ----KILVPLERLNVVYYPVEKLRKFDKELISFFNINTPDDLKRAEEICSKMST 197 (208)
T ss_dssp ----CTHHHHHTSCEEEEEGGGGTTTCTTCGGGCCCCSHHHHHHHHHHHHHC--
T ss_pred ----CHHHHHHhCCEEEecHHHhcccCcccceEEecCCHHHHHHHHHHhccccc
Confidence 13445555566666654 358999999999999988765543
No 53
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.54 E-value=9.3e-15 Score=146.23 Aligned_cols=197 Identities=13% Similarity=0.124 Sum_probs=126.4
Q ss_pred CCCeeEEEEcCCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHh-CCCCeEEEEccCCchhHHHHHHhhccCCCCcc
Q 015713 90 PKNVAAIILGGGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCIN-SGFNKIFIMTQFNSFSLNRHLARSYNLGNGVN 168 (402)
Q Consensus 90 ~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~-~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~ 168 (402)
|++|.+||||||.||||. ...||+|+|++|+ |||+|+++.+.. .++++|+|+++ ..+.+. .+ +. +
T Consensus 1 Mmki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~-----~~-~~-~-- 66 (371)
T 1w55_A 1 MSEMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMK-----KF-TK-N-- 66 (371)
T ss_dssp -CCEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHH-----TT-CS-S--
T ss_pred CCccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHH-----HH-hC-C--
Confidence 456899999999999996 3579999999999 999999999998 58999999998 433322 11 11 1
Q ss_pred cCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCC-ccHHHHHHHHHhCCCcEEEE
Q 015713 169 FGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYR-MDYTEFLQKHIDTKADITVS 246 (402)
Q Consensus 169 ~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~-~di~~~l~~h~~~~aditi~ 246 (402)
++++.. ..|..++++.++..++ .+.++++.||. +.. ..+.++++.+.+. +.++.
T Consensus 67 -----v~~v~~-----------g~g~~~sv~~aL~~l~------~d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~ 122 (371)
T 1w55_A 67 -----YEFIEG-----------GDTRAESLKKALELID------SEFVMVSDVARVLVSKNLFDRLIENLDKA--DCITP 122 (371)
T ss_dssp -----SEEEEC-----------CSSHHHHHHHHHTTCC------SSEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEE
T ss_pred -----CEEEeC-----------CCChHHHHHHHHHhcC------CCeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEE
Confidence 344421 1378899998876542 47899999999 444 4578888877655 34455
Q ss_pred EEEcCCCCCCcceEEEECCCCcEEEEEecCCCCCCCCcccccccccCCCCCCCCCCceeee-eEEEEehHHHHHHHHhhC
Q 015713 247 CVPMDDCRASDYGLMKIDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVKFPYIASM-GVYLFRTDVLLNLLRSSY 325 (402)
Q Consensus 247 ~~~~~~~~~~~~g~v~iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~~~~~~~~-Giyvf~~~~l~~ll~~~~ 325 (402)
+.+..+ . ++. + .+.+... .+... .-++|+.+.+.++++...
T Consensus 123 ~~~~~d--~-----vk~-----v---~~t~~r~-----------------------~l~~~~~P~~f~~~~l~~~~~~~~ 164 (371)
T 1w55_A 123 ALKVAD--T-----TLF-----D---NEALQRE-----------------------KIKLIQTPQISKTKLLKKALDQNL 164 (371)
T ss_dssp EECCCS--C-----EEE-----T---TEEECGG-----------------------GCCEECSCEEEEHHHHHHHTSSCC
T ss_pred EEEeec--C-----eee-----e---eeecCcc-----------------------ceeecCCcceecHHHHHHHHHhcc
Confidence 555433 1 110 0 0111100 00011 125788887776654321
Q ss_pred CCCCchhhccHHhhhc-CCcEEEEEEcCeEEecCCHHHHHHHH
Q 015713 326 PLSNDFGSEIIPASVK-DHNVQAFLFNDYWEDIGTIKSFFMPI 367 (402)
Q Consensus 326 ~~~~d~~~~ii~~li~-~~~v~a~~~~g~w~DIgtp~d~~~A~ 367 (402)
. ..+....+.. ..++..+..++.|.||+||+||..|+
T Consensus 165 ---~--~td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 165 ---E--FTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp ---C--CSSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred ---c--ccCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 0 1121111111 35787777777899999999999998
No 54
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.51 E-value=2.4e-13 Score=140.40 Aligned_cols=263 Identities=14% Similarity=0.144 Sum_probs=161.6
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecC-CcchHHHHHHHHhHhCC------CCeEEEEccCCchhHHHHHH-hhcc
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIG-GNYRLIDIPMSNCINSG------FNKIFIMTQFNSFSLNRHLA-RSYN 162 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIg-G~~pLId~~i~~l~~~G------I~~IiVv~~~~~~~i~~~l~-~~y~ 162 (402)
+++.+||||||.||||+ ...||||+||+ |+ |++++.++.+...| |.-+++...+..+.+.+||. +.-.
T Consensus 74 ~k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 74 QSTVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPW 149 (505)
T ss_dssp HTEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHH
T ss_pred hcceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhc
Confidence 36899999999999997 67899999999 98 99999999999875 44444555566899999997 3111
Q ss_pred CCC---Ccc-cCCCcEEEEeccc-C----CCcCC-ccccCChHHHHHHHH--HHHHhhhcCCCceEEEEcCCccCC-ccH
Q 015713 163 LGN---GVN-FGDGFVEVLAATQ-T----PGEAG-KKWFQGTADAVRQFI--WVFEDAKNKNVENVLILSGDHLYR-MDY 229 (402)
Q Consensus 163 ~~~---g~~-~~~~~V~vl~~~q-~----~~~~g-~~~~~Gta~Al~~~~--~~l~~~~~~~~e~~Lvl~gD~l~~-~di 229 (402)
|+- .+. |..+.+..+.... . ..+.. ...+.||++++.... ..+++....+.++++|+++|.+.. .|+
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 321 111 2222222222211 0 00000 123469999987541 012221123578999999999884 577
Q ss_pred HHHHHHHHhCCCcEEEEEEEcCCCCCCcceEEEEC------CCCc-------E--EEEEecCCCCCCCCcccccccccCC
Q 015713 230 TEFLQKHIDTKADITVSCVPMDDCRASDYGLMKID------RSGQ-------I--IQFAEKPKGPDLKGMQCDTTLLGLS 294 (402)
Q Consensus 230 ~~~l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD------~~g~-------V--~~~~EKp~~~~~~~~~v~~~~~~~~ 294 (402)
.++.+|.++++++++.+.+..+. ...+|++..+ .+|+ + +++.|-|... ++. .-|.+
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~~~-d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~------~~~-~~g~~ 300 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRTES-DKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKAD------MES-FQDIN 300 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECCTT-CCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGG------HHH-HHCTT
T ss_pred -HHHHHHHhcCCcEEEEEEEecCC-ccceeEEEEecccccccCCccccccCceeEEEeccCChhh------hhc-ccCcc
Confidence 89999999999999999887641 3568887762 4677 3 3333333321 100 00110
Q ss_pred CCCCCCCCceeeeeEEEEehHHHHHHHHhh-----CCC-----C--------------CchhhccHHhhhcCCcEEEEEE
Q 015713 295 MPDAVKFPYIASMGVYLFRTDVLLNLLRSS-----YPL-----S--------------NDFGSEIIPASVKDHNVQAFLF 350 (402)
Q Consensus 295 ~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~-----~~~-----~--------------~d~~~~ii~~li~~~~v~a~~~ 350 (402)
.-.+.++...+|+-+.+.++++.. .+. . ..++.++++.+ .+..++.+
T Consensus 301 ------~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~vn~K~i~~~d~~~~~~~qlE~~~~d~~~~~---~~~~~~~V 371 (505)
T 2oeg_A 301 ------KYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIRNEKTVDSSNSASPKVYQLETAMGAAIAMF---ESASAIVV 371 (505)
T ss_dssp ------TTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEEEEEESSSSCTTSCEEEEEECCGGGGGGSC---TTCEEEEC
T ss_pred ------ccCeeEEEEEEEEHHHHHHHHhhhcCccCCcceecccccCCCCCCCCCeEEEeEHHHHHHHhc---CcceEEEe
Confidence 112478999999999998887651 110 0 00222333322 13334433
Q ss_pred -cCeEEecCCHHHHHHHHhHhhcccC
Q 015713 351 -NDYWEDIGTIKSFFMPIWPSQNSLR 375 (402)
Q Consensus 351 -~g~w~DIgtp~d~~~A~~~ll~~~~ 375 (402)
...|..+.+..|+..++..+.....
T Consensus 372 ~R~~FsPvKn~~dl~~~~sdly~~~~ 397 (505)
T 2oeg_A 372 PRSRFAPVKTCADLLALRSDAYVVTD 397 (505)
T ss_dssp CGGGCCCCSSHHHHHHHHSTTEEECT
T ss_pred ccceeecccCCCCHHHHHHHHHhhcC
Confidence 2368889999999988887765443
No 55
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.50 E-value=8.8e-13 Score=132.48 Aligned_cols=210 Identities=11% Similarity=0.109 Sum_probs=144.6
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceec---CCcchHHHHHHHHhHh-------------CCCCeEEEEccCCchhHH
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPI---GGNYRLIDIPMSNCIN-------------SGFNKIFIMTQFNSFSLN 154 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpI---gG~~pLId~~i~~l~~-------------~GI~~IiVv~~~~~~~i~ 154 (402)
.++.+||||||.|||| +...||+|+|| .|+ |++++.++.+.. .+|.-+++...+..+.+.
T Consensus 34 gkvavvlLAGG~GTRL---G~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~ 109 (405)
T 3oc9_A 34 GKTALITPAGGQGSRL---GFEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEIN 109 (405)
T ss_dssp TCEEEEEECCSBCTTT---TCCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHH
T ss_pred CceEEEEecCCCcccc---cCCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHH
Confidence 4689999999999999 55799999999 898 999999988863 578888888888999999
Q ss_pred HHHHhhccCCCCcccCCCcEEEEecccCC-----C-----c-CCc-cccCChHHHHHHHH--HHHHhhhcCCCceEEEEc
Q 015713 155 RHLARSYNLGNGVNFGDGFVEVLAATQTP-----G-----E-AGK-KWFQGTADAVRQFI--WVFEDAKNKNVENVLILS 220 (402)
Q Consensus 155 ~~l~~~y~~~~g~~~~~~~V~vl~~~q~~-----~-----~-~g~-~~~~Gta~Al~~~~--~~l~~~~~~~~e~~Lvl~ 220 (402)
+++.+.-.|+- ....|.+.....-+ + + ... ..+.|+++...... ..++++...+.+.++|.+
T Consensus 110 ~~f~~~~~fGl----~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~n 185 (405)
T 3oc9_A 110 NYFKEHQYFGL----SSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHN 185 (405)
T ss_dssp HHHHHTGGGGS----CTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEC
T ss_pred HHHHhCcccCC----CccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEe
Confidence 99975321331 11123322110000 0 0 001 12358888777532 234444345679999999
Q ss_pred CCc-cCCccHHHHHHHHHhCCCcEEEEEEEcCCCCCCcceEEE-ECCCCcEEEEEecCCCCCCCCcccccccccCCCCCC
Q 015713 221 GDH-LYRMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMK-IDRSGQIIQFAEKPKGPDLKGMQCDTTLLGLSMPDA 298 (402)
Q Consensus 221 gD~-l~~~di~~~l~~h~~~~aditi~~~~~~~~~~~~~g~v~-iD~~g~V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a 298 (402)
+|. |.......++.+|.++++++++-+.+..+. ...+|.+. .|...+|+++.|.|...+ .-..+.
T Consensus 186 vDN~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~-dek~Gvl~~~dg~~~vvEysei~~e~e--~~~~~g---------- 252 (405)
T 3oc9_A 186 VDNILCKDVDPNMIGYMDLLQSEICIKIVKKGFK-EEKVGVLVKEQERIKVVEYTELTDELN--KQLSNG---------- 252 (405)
T ss_dssp TTBTTCCSSCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEETTEEEEECGGGCCTTTT--CBCTTS----------
T ss_pred CCCcccccCCHHHHHHHHHcCCCEEEEEEECCCC-CCccceEEEECCeeEEEEEeeCCHHHh--hcCCCC----------
Confidence 999 888888889999999999999999887541 25677765 454457888888776511 111111
Q ss_pred CCCCceeeeeEEEEehHHHHHHH
Q 015713 299 VKFPYIASMGVYLFRTDVLLNLL 321 (402)
Q Consensus 299 ~~~~~~~~~Giyvf~~~~l~~ll 321 (402)
...-+..++++|+|+.++|.+++
T Consensus 253 ~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 253 EFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp CBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ceeeccceeEeeecCHHHHHHhh
Confidence 11235678999999999998876
No 56
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.45 E-value=7.8e-13 Score=136.50 Aligned_cols=211 Identities=18% Similarity=0.262 Sum_probs=141.0
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecC---CcchHHHHHHHHhHhC--------C------CCeEEEEccCCchhH
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIG---GNYRLIDIPMSNCINS--------G------FNKIFIMTQFNSFSL 153 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIg---G~~pLId~~i~~l~~~--------G------I~~IiVv~~~~~~~i 153 (402)
.+|.+||||||.|||| +...||+|+||+ |+ |++++.++.+... | |..+++...+..+.+
T Consensus 102 gkvavvlLaGG~GTRL---g~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t 177 (486)
T 2yqc_A 102 GEVAVLLMAGGQGTRL---GSSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNAT 177 (486)
T ss_dssp TCEEEEEEEESBCGGG---TCSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHH
T ss_pred CCeEEEEEcCCccccC---CCCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHH
Confidence 3699999999999999 678999999999 99 9999999999886 7 889999999999999
Q ss_pred HHHHHhhccCCCCcccCCCcEEEEecccCC--CcCC----------c-cccCChHHHHHHHHH--HHHhhhcCCCceEEE
Q 015713 154 NRHLARSYNLGNGVNFGDGFVEVLAATQTP--GEAG----------K-KWFQGTADAVRQFIW--VFEDAKNKNVENVLI 218 (402)
Q Consensus 154 ~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~--~~~g----------~-~~~~Gta~Al~~~~~--~l~~~~~~~~e~~Lv 218 (402)
.+++.+.-.|+-. ...|.++....-+ ...| . ..+.|+++.+..... .+++....+.+.+.|
T Consensus 178 ~~~~~~~~~fgl~----~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v 253 (486)
T 2yqc_A 178 ESFFIENNYFGLN----SHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHM 253 (486)
T ss_dssp HHHHHHTGGGGSC----GGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEE
T ss_pred HHHHhhccccCCC----cceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEE
Confidence 9999753113311 1123221111000 0001 0 125699998865532 233333347899999
Q ss_pred EcCCccCC--ccHHHHHHHHHhCCCcEEEEEEEcCCCCCCcceEEEEC-CCC--cEEEEEecCCCCCCCCccccc---cc
Q 015713 219 LSGDHLYR--MDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKID-RSG--QIIQFAEKPKGPDLKGMQCDT---TL 290 (402)
Q Consensus 219 l~gD~l~~--~di~~~l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD-~~g--~V~~~~EKp~~~~~~~~~v~~---~~ 290 (402)
.+.|.+.- .| ..++..|.++++++++.+.+.... ...+|++... .+| +|+++.|+|..... ..|. +.
T Consensus 254 ~~vDN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~~-~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~---~~~~~~~~~ 328 (486)
T 2yqc_A 254 YCVDNCLVKVAD-PIFIGFAIAKKFDLATKVVRKRDA-NESVGLIVLDQDNQKPCVIEYSEISQELAN---KKDPQDSSK 328 (486)
T ss_dssp EETTBTTCCTTC-HHHHHHHHHHTCSEEEEEEECCST-TCCCCEEEEETTTTEEEEECGGGSCHHHHH---CEETTEEEE
T ss_pred ECCCCceeeccC-HHHHHHHHHcCCCEEEEEEEcCCC-CCceeEEEEEecCCCEEEEEEecCCHHHhh---ccccccccc
Confidence 99998543 34 457889999999999988876321 3567776643 145 57888888753100 0000 00
Q ss_pred ccCCCCCCCCCCceeeeeEEEEehHHHHHHHHh
Q 015713 291 LGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRS 323 (402)
Q Consensus 291 ~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~ 323 (402)
+ ..+..++|+|+|+.++|.+++..
T Consensus 329 ~---------~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 329 L---------FLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp E---------SSCEEEEEEEEEEHHHHHHHHHH
T ss_pred c---------cccceeEEEEEEeHHHHHHHHHh
Confidence 0 13578999999999999884443
No 57
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.21 E-value=1.7e-05 Score=81.73 Aligned_cols=252 Identities=12% Similarity=0.153 Sum_probs=142.2
Q ss_pred CCCCeeEEEEcCCCCCcCCCCCCCCCccceecC-CcchHHHHHHHHhHhC----CC-CeEEEEcc-CCchhHHHHHHhhc
Q 015713 89 DPKNVAAIILGGGAGTRLFPLTNRRAKPAVPIG-GNYRLIDIPMSNCINS----GF-NKIFIMTQ-FNSFSLNRHLARSY 161 (402)
Q Consensus 89 ~~~~m~AIILAaG~GtRL~PlT~~~PKpLvpIg-G~~pLId~~i~~l~~~----GI-~~IiVv~~-~~~~~i~~~l~~~y 161 (402)
.-.++..|+||||.|||| +...||.++||. |+ +++++.++++... |. -.++|.+. .+.+...++|.+..
T Consensus 124 ~l~kvavvlLaGGlGTRL---G~~~PK~~i~V~sgk-tflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~ 199 (528)
T 3r3i_A 124 VLNKLVVVKLNGGLGTSM---GCKGPKSLIGVRNEN-TFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYN 199 (528)
T ss_dssp TCTTEEEEEECCCBCTTT---TCSSBGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGT
T ss_pred hcCceEEEEeCCCCcccc---CCCCCccceecCCCC-cHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcC
Confidence 456899999999999999 567899999997 66 9999999998774 42 23455554 56677777776432
Q ss_pred cCCCCcccCCCcEEEEecccCC---------Cc-------C-Ccccc-CChHHHHH--HHHHHHHhhhcCCCceEEEEcC
Q 015713 162 NLGNGVNFGDGFVEVLAATQTP---------GE-------A-GKKWF-QGTADAVR--QFIWVFEDAKNKNVENVLILSG 221 (402)
Q Consensus 162 ~~~~g~~~~~~~V~vl~~~q~~---------~~-------~-g~~~~-~Gta~Al~--~~~~~l~~~~~~~~e~~Lvl~g 221 (402)
.|+. .|.+.....-+ -+ . ...|. -|.++-.. ..-..+++....+.+.+.+.+.
T Consensus 200 ~fg~-------~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nv 272 (528)
T 3r3i_A 200 HCRV-------KIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNI 272 (528)
T ss_dssp TSSC-------CEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEET
T ss_pred ccCC-------CeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEcc
Confidence 1331 12222211111 00 0 11232 35544322 2223455555568899999999
Q ss_pred CccC-CccHHHHHHHHHhC----CCcEEEEEEEcCCCCCCcceEEEECCCCc--EEEEEecCCCCCCCCcccccccccCC
Q 015713 222 DHLY-RMDYTEFLQKHIDT----KADITVSCVPMDDCRASDYGLMKIDRSGQ--IIQFAEKPKGPDLKGMQCDTTLLGLS 294 (402)
Q Consensus 222 D~l~-~~di~~~l~~h~~~----~aditi~~~~~~~~~~~~~g~v~iD~~g~--V~~~~EKp~~~~~~~~~v~~~~~~~~ 294 (402)
|.+. ..| ..++.++..+ ++++.+-+.+-... ...-|.+. ..+|+ ++++.|-|...... -++.+
T Consensus 273 DNlga~vD-p~~Lg~~~~~~~~~~~d~~~kVv~Kt~~-dek~Gvl~-~~dGk~~vvEyseip~e~~~~----~~g~~--- 342 (528)
T 3r3i_A 273 DNLGATVD-LYILNHLMNPPNGKRCEFVMEVTNKTRA-DVKGGTLT-QYEGKLRLVEIAQVPKAHVDE----FKSVS--- 342 (528)
T ss_dssp TBTTCCCC-HHHHHHHSSCSSSCCCSEEEEECCCCTT-CCSSCEEE-CSSSSCEEECTTSSCGGGTTT----SSCSS---
T ss_pred CCcccccC-HHHHHHHHhcccccCCcEEEEEeEcccc-CCcccEEE-EECCeEEEEEecCCChhHhhc----cCCcc---
Confidence 9964 344 3366777776 88887766654321 22235443 23554 44444443322110 00111
Q ss_pred CCCCCCCCceeeeeEEEEehHHHHHHHHhhCCC------------C------CchhhccHHhhhcCCcEEEEEE-cCeEE
Q 015713 295 MPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPL------------S------NDFGSEIIPASVKDHNVQAFLF-NDYWE 355 (402)
Q Consensus 295 ~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~------------~------~d~~~~ii~~li~~~~v~a~~~-~g~w~ 355 (402)
+ -.+.++..++|+-+.+.++++..... . ..+..++++.. .+..++.+ ...|.
T Consensus 343 -----~-f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f---~~~~~i~VpR~rF~ 413 (528)
T 3r3i_A 343 -----K-FKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSF---ENSLGINVPRSRFL 413 (528)
T ss_dssp -----S-CCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTS---SSCCCEECCGGGCC
T ss_pred -----c-CCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhc---cCcEEEEEehHHcc
Confidence 1 13478999999999999888753110 0 00122222222 12333333 33499
Q ss_pred ecCCHHHHHHHHhHh
Q 015713 356 DIGTIKSFFMPIWPS 370 (402)
Q Consensus 356 DIgtp~d~~~A~~~l 370 (402)
.+.+..|++-++-.+
T Consensus 414 PvKn~sdLll~~Sdl 428 (528)
T 3r3i_A 414 PVKTTSDLLLVMSNL 428 (528)
T ss_dssp BCCSHHHHHHHHSTT
T ss_pred cccchHHHHHHhcce
Confidence 999999998666444
No 58
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=97.98 E-value=0.00019 Score=73.47 Aligned_cols=261 Identities=13% Similarity=0.151 Sum_probs=152.2
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceec-CCcchHHHHHHHHhHhC----CC-CeEEEEccC-CchhHHHHHHhhccC
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPI-GGNYRLIDIPMSNCINS----GF-NKIFIMTQF-NSFSLNRHLARSYNL 163 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpI-gG~~pLId~~i~~l~~~----GI-~~IiVv~~~-~~~~i~~~l~~~y~~ 163 (402)
+++..|+||||.|||| ....||.++|| .|+ ++++..++++... |. --++|.|.+ +.+...++|.+.-.|
T Consensus 75 ~kvavvlLaGGlGTRL---G~~~pKg~~~v~sgk-sflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~F 150 (484)
T 3gue_A 75 RQAVVLKLNGGLGTGM---GLNGPKSLLQVKNGQ-TFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTL 150 (484)
T ss_dssp TTEEEEEEECCCCGGG---TCSSCGGGSEEETTE-EHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHH
T ss_pred hhcEEEEEcCCccccc---CCCCCceeeecCCCC-cHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCccc
Confidence 4789999999999999 56689999999 455 9999999888762 32 245666665 567888888643113
Q ss_pred CC---C-cccCCCcEEEEecccC-C----CcCCcccc-CChHHHHHHH--HHHHHhhhcCCCceEEEEcCCccCCccHHH
Q 015713 164 GN---G-VNFGDGFVEVLAATQT-P----GEAGKKWF-QGTADAVRQF--IWVFEDAKNKNVENVLILSGDHLYRMDYTE 231 (402)
Q Consensus 164 ~~---g-~~~~~~~V~vl~~~q~-~----~~~g~~~~-~Gta~Al~~~--~~~l~~~~~~~~e~~Lvl~gD~l~~~di~~ 231 (402)
+- . .-|..+.+..+..... + ......|. -|.++-.... -..+++....+.+++.+.+.|.+...-=..
T Consensus 151 gl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~ 230 (484)
T 3gue_A 151 YEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVR 230 (484)
T ss_dssp HTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHH
T ss_pred CCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHH
Confidence 21 1 1122233333322111 0 00112233 4665533322 234555555688999999999976532256
Q ss_pred HHHHHHhCCCcEEEEEEEcCCCCCCcceE-EEE--------CCCCc--EEEEEecCCCCCCCCcccccccccCCCCCCCC
Q 015713 232 FLQKHIDTKADITVSCVPMDDCRASDYGL-MKI--------DRSGQ--IIQFAEKPKGPDLKGMQCDTTLLGLSMPDAVK 300 (402)
Q Consensus 232 ~l~~h~~~~aditi~~~~~~~~~~~~~g~-v~i--------D~~g~--V~~~~EKp~~~~~~~~~v~~~~~~~~~~~a~~ 300 (402)
++.++.++++++.+-+.+-... ...-|. +.. ..+|+ |.++.|-|....... . ...+
T Consensus 231 ~lG~~~~~~~d~~~kvv~Kt~~-dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f--~----------~~~g 297 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRRTES-DKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSF--Q----------NIAK 297 (484)
T ss_dssp HHHHHHHTTCSEEEEEEECCTT-CCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHHH--T----------CTTT
T ss_pred HHHHHHhcCCCEEEEEEECCCC-CCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhhh--c----------CCCC
Confidence 7888889999998888776432 233453 333 12454 444444433211000 0 0111
Q ss_pred CCceeeeeEEEEehHHHHHHHHhh--C---CC----------C---------CchhhccHHhhhcCCcEEEEEE-cCeEE
Q 015713 301 FPYIASMGVYLFRTDVLLNLLRSS--Y---PL----------S---------NDFGSEIIPASVKDHNVQAFLF-NDYWE 355 (402)
Q Consensus 301 ~~~~~~~Giyvf~~~~l~~ll~~~--~---~~----------~---------~d~~~~ii~~li~~~~v~a~~~-~g~w~ 355 (402)
. ...+++-.++.-..+.++++.. . +. . +.++.++++.+ .+..++.+ ...|.
T Consensus 298 ~-~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~---~~~~~ieV~R~rF~ 373 (484)
T 3gue_A 298 H-CFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLF---DRSEAVVVPRERFA 373 (484)
T ss_dssp S-CEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTS---SSEEEEECCGGGCC
T ss_pred c-eEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhC---CccEEEEEChhhcc
Confidence 2 2448888999988887777653 1 10 0 01233444333 24555544 35799
Q ss_pred ecCCHHHHHHHHhHhhc
Q 015713 356 DIGTIKSFFMPIWPSQN 372 (402)
Q Consensus 356 DIgtp~d~~~A~~~ll~ 372 (402)
.+.+..|++-++-.+-.
T Consensus 374 PvKn~sdLl~~~Sdly~ 390 (484)
T 3gue_A 374 PVKTCSDLLALRSDAYQ 390 (484)
T ss_dssp CCSSHHHHHHHHSTTEE
T ss_pred ccccchHHHHHhhhcee
Confidence 99999999888766654
No 59
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.71 E-value=0.00051 Score=72.10 Aligned_cols=173 Identities=17% Similarity=0.198 Sum_probs=104.9
Q ss_pred CCeeEEEEcCCCCCcCCCCCCCCCccceecC---CcchHHHHHHHHhHh-CCC-CeEEEEcc-CCchhHHHHHHhhccCC
Q 015713 91 KNVAAIILGGGAGTRLFPLTNRRAKPAVPIG---GNYRLIDIPMSNCIN-SGF-NKIFIMTQ-FNSFSLNRHLARSYNLG 164 (402)
Q Consensus 91 ~~m~AIILAaG~GtRL~PlT~~~PKpLvpIg---G~~pLId~~i~~l~~-~GI-~~IiVv~~-~~~~~i~~~l~~~y~~~ 164 (402)
+++..|+||||.|||| ....||.++|++ |+ +++++.++.+.+ .|. -.++|.|. .+.+...++|.+ |.+.
T Consensus 113 ~kvavvllaGGlGTRL---G~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-fgl~ 187 (630)
T 3ogz_A 113 CKTVFVLVAGGLGERL---GYSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-LQLE 187 (630)
T ss_dssp GGEEEEEECCCEEGGG---TEEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-TTCC
T ss_pred hhceEEEecCCccccc---CCCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-hCCC
Confidence 3689999999999998 567899999997 88 999999999986 342 24455555 567888888876 5332
Q ss_pred CC-cc-cCCCcEEEEeccc-C-C-CcCC-cccc-CChHHHHHHHHH--------------------HHHhhhcCCCceEE
Q 015713 165 NG-VN-FGDGFVEVLAATQ-T-P-GEAG-KKWF-QGTADAVRQFIW--------------------VFEDAKNKNVENVL 217 (402)
Q Consensus 165 ~g-~~-~~~~~V~vl~~~q-~-~-~~~g-~~~~-~Gta~Al~~~~~--------------------~l~~~~~~~~e~~L 217 (402)
.. +. |..+.+..+.... . . .+.+ ..|. -|.++-...... .+++....+.+.+.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 11 00 1112222221110 0 0 0111 1222 466554433221 45555556889999
Q ss_pred EEcCCccC-CccHHHHHHHHHhCCCcEEEEEEEcCCCCCCcceEEEE-CCCCcE
Q 015713 218 ILSGDHLY-RMDYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKI-DRSGQI 269 (402)
Q Consensus 218 vl~gD~l~-~~di~~~l~~h~~~~aditi~~~~~~~~~~~~~g~v~i-D~~g~V 269 (402)
+.+.|.+. ..--..++..+.++++++.+-|.+... ....-+++.+ ..+|+.
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~p-~E~vG~l~~~~~~dGk~ 320 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPRVP-KEPIGLLCRTKKNSGDP 320 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCCS-SCSSCEEEEEESSTTSC
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEECCC-CcceeeEEEEecCCCce
Confidence 99999944 444455788889999999888776421 1222234443 245655
No 60
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.25 E-value=0.00035 Score=63.43 Aligned_cols=105 Identities=19% Similarity=0.227 Sum_probs=70.7
Q ss_pred CCeeEEEEc--CCCCCcCCCCCCCCCccceecCCcchHHHHHHHHhHhCCCCeE-EEEccCCchhHHHHHHhhccCCCCc
Q 015713 91 KNVAAIILG--GGAGTRLFPLTNRRAKPAVPIGGNYRLIDIPMSNCINSGFNKI-FIMTQFNSFSLNRHLARSYNLGNGV 167 (402)
Q Consensus 91 ~~m~AIILA--aG~GtRL~PlT~~~PKpLvpIgG~~pLId~~i~~l~~~GI~~I-iVv~~~~~~~i~~~l~~~y~~~~g~ 167 (402)
+.|.+||++ +...|||.|. .........++ |||+|+++.+..++++++ +|++++.. +. .+
T Consensus 2 ~~~~~vip~k~g~~KtRL~~~---l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~--~~-----~~------ 64 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSPV---LSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYG--LE-----EM------ 64 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTTT---SCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTT--CS-----SC------
T ss_pred CceEEEEEeCCCCCccccCcc---CCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHH--HH-----hh------
Confidence 358899999 7778898421 11111225567 999999999999999999 99987643 11 11
Q ss_pred ccCCCcEEEEecccCCCcCCccccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCc-cCCc-cHHHHHH
Q 015713 168 NFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDH-LYRM-DYTEFLQ 234 (402)
Q Consensus 168 ~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~-l~~~-di~~~l~ 234 (402)
++ +.++... .|.+++++.+...+ .+.++++.||+ +... .+..+++
T Consensus 65 -~~---~~~v~~~-----------~gl~~sl~~a~~~~-------~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 65 -TE---ARVLLDE-----------KDLNEALNRYLKEA-------EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp -CS---SEEEECC-----------SCHHHHHHHHHHHC-------CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred -cC---CEEEECC-----------CCHHHHHHHHHHhc-------CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 12 3444322 27899998886543 37899999999 4444 4566665
No 61
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=97.06 E-value=1.1e-05 Score=80.35 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=64.4
Q ss_pred ceEEEEcCCccCCc--cHHHHHHHHHhCCCcEEEEEEEcCCCCCCcceEEEECC--CCcEEEEEecCCCCCCCCcccccc
Q 015713 214 ENVLILSGDHLYRM--DYTEFLQKHIDTKADITVSCVPMDDCRASDYGLMKIDR--SGQIIQFAEKPKGPDLKGMQCDTT 289 (402)
Q Consensus 214 e~~Lvl~gD~l~~~--di~~~l~~h~~~~aditi~~~~~~~~~~~~~g~v~iD~--~g~V~~~~EKp~~~~~~~~~v~~~ 289 (402)
..=|+-.|||+|+| +|.++++.|. +++.. ++....||+..+|+ +++| .|.|||+...
T Consensus 11 ~~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~--------- 71 (374)
T 2iu8_A 11 SSGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAK--------- 71 (374)
T ss_dssp ----------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHH---------
T ss_pred ccCcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhh---------
Confidence 34578889999998 8999999885 35543 23467899988874 4677 9999997431
Q ss_pred cccCCCCCCCCCCceeeeeEEEEehHHHHHHHHhhCCCCCchhhccHHhhhcCCcEEEEEEcCeEEec
Q 015713 290 LLGLSMPDAVKFPYIASMGVYLFRTDVLLNLLRSSYPLSNDFGSEIIPASVKDHNVQAFLFNDYWEDI 357 (402)
Q Consensus 290 ~~~~~~~~a~~~~~~~~~Giyvf~~~~l~~ll~~~~~~~~d~~~~ii~~li~~~~v~a~~~~g~w~DI 357 (402)
....++||+|+|+++++..+. ++ .+++| ++.++..++|.+..+|+|.
T Consensus 72 -----------~~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~~~~~a~~~~~~~~~~ 118 (374)
T 2iu8_A 72 -----------HLKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSESPSLVFQKCLELFIT 118 (374)
T ss_dssp -----------HHHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESSCHHHHHHHHHTTTSC
T ss_pred -----------hhhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeCCHHHHHHHHHHHhcc
Confidence 014578999999999874221 12 46667 6666666565555566664
No 62
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=94.85 E-value=0.82 Score=42.24 Aligned_cols=92 Identities=9% Similarity=0.009 Sum_probs=59.4
Q ss_pred chHHHHHHHHhHhCCCCeEEEEccCCchhHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCccccCChHHHHHHHHH
Q 015713 124 YRLIDIPMSNCINSGFNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIW 203 (402)
Q Consensus 124 ~pLId~~i~~l~~~GI~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~~~~ 203 (402)
.+|+.++++.+..++...++++++.....+.+ ...+ .+. + +.+.. |.. .|.+.+++.+..
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~--~~~~-~~~------~-~~~~~--q~~--------~gLg~rl~~a~~ 96 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDADLPEK--FKAW-LGP------Q-HMFAA--QQG--------LDLGERMKHAMQ 96 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTTHHHH--HHHH-HCT------T-SEEEE--CCS--------SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchhhhhh--hhhh-ccC------C-cEEec--CCC--------CCHHHHHHHHHH
Confidence 37999999999999888888888765544320 0111 111 1 22222 321 378999998877
Q ss_pred HHHhhhcCCCceEEEEcCCc--cCCccHHHHHHHHHh
Q 015713 204 VFEDAKNKNVENVLILSGDH--LYRMDYTEFLQKHID 238 (402)
Q Consensus 204 ~l~~~~~~~~e~~Lvl~gD~--l~~~di~~~l~~h~~ 238 (402)
.+-. ...+.++|+.+|+ |...++.++++.+..
T Consensus 97 ~~~~---~~~~~vliigaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 97 KAFD---DGYDRVVLMGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp HHHH---TTCSEEEEECSSCTTCCHHHHHHHHHHTTT
T ss_pred HHHh---CCCCeEEEEcCCCCCCCHHHHHHHHHHhcc
Confidence 6521 2457899999999 445678888775543
No 63
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=85.08 E-value=8.5 Score=33.80 Aligned_cols=101 Identities=16% Similarity=0.157 Sum_probs=61.6
Q ss_pred ecCCcchHHHHHHHHhHhCCCC--eEEEEccCCch---hHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCccccCC
Q 015713 119 PIGGNYRLIDIPMSNCINSGFN--KIFIMTQFNSF---SLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQG 193 (402)
Q Consensus 119 pIgG~~pLId~~i~~l~~~GI~--~IiVv~~~~~~---~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~~G 193 (402)
|.-+....|...++.+.+.... +|+||-..... ++.+.+...+ . .|.++... ..|
T Consensus 12 p~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~--------~--~i~~i~~~----------n~G 71 (240)
T 3bcv_A 12 PIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQY--------P--NIKVIHKK----------NAG 71 (240)
T ss_dssp EESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHC--------S--SEEEEECC----------CCC
T ss_pred ecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHhhC--------C--CEEEEECC----------CCC
Confidence 3334336778888888775433 66666543222 2222222222 1 26666522 148
Q ss_pred hHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhCCCcEEE
Q 015713 194 TADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDTKADITV 245 (402)
Q Consensus 194 ta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~~aditi 245 (402)
.+.+...++... ..+.++++.+|.+...+ +..+++...+.+.++.+
T Consensus 72 ~~~a~N~g~~~a------~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 72 LGMACNSGLDVA------TGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp HHHHHHHHHHHC------CSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHc------CCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 888888877554 46899999999988877 56777776665666644
No 64
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=82.84 E-value=25 Score=31.07 Aligned_cols=111 Identities=15% Similarity=0.199 Sum_probs=62.5
Q ss_pred eecCCcchHHHHHHHHhHhCCCC--eEEEEccCCchhHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCccccCChH
Q 015713 118 VPIGGNYRLIDIPMSNCINSGFN--KIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTA 195 (402)
Q Consensus 118 vpIgG~~pLId~~i~~l~~~GI~--~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~~Gta 195 (402)
+|.-+....|...++.+.+.... +|+|+-........+.+ +.| .. ...|.++..... +-.......|.+
T Consensus 7 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~-~~~-~~------~~~i~~i~~~~~-~~~~~~~n~G~~ 77 (255)
T 1qg8_A 7 MTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVI-RPF-LN------DNRVRFYQSDIS-GVKERTEKTRYA 77 (255)
T ss_dssp EEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHH-GGG-GG------STTEEEEECCCC-SHHHHHSSCHHH
T ss_pred EEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHH-HHH-hh------cCCEEEEecccc-cccccccccCHH
Confidence 44444446788888888775443 66666554433333333 333 11 113666654300 000000014778
Q ss_pred HHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhC-CCcE
Q 015713 196 DAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDT-KADI 243 (402)
Q Consensus 196 ~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~-~adi 243 (402)
.+...++... ..+.++++.+|.+...+ +..+++...+. +.++
T Consensus 78 ~a~N~gi~~a------~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~ 121 (255)
T 1qg8_A 78 ALINQAIEMA------EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAV 121 (255)
T ss_dssp HHHHHHHHHC------CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHHc------CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceE
Confidence 8887776553 46899999999988776 56677766654 4444
No 65
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=67.55 E-value=76 Score=31.16 Aligned_cols=98 Identities=14% Similarity=0.081 Sum_probs=59.2
Q ss_pred hHHHHHHHHhHhCCC----CeEEEEccCCch-hHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCccccCChHHHHH
Q 015713 125 RLIDIPMSNCINSGF----NKIFIMTQFNSF-SLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVR 199 (402)
Q Consensus 125 pLId~~i~~l~~~GI----~~IiVv~~~~~~-~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~ 199 (402)
..|...|+.+.+.-. .+|+||-..... ...+.+.+.. . .++ ..|.++...+. .|-+.|..
T Consensus 43 ~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~--~---~~~-~~v~vi~~~~n---------~G~~~a~N 107 (472)
T 1xhb_A 43 STLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV--K---KLK-VPVHVIRMEQR---------SGLIRARL 107 (472)
T ss_dssp HHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH--H---SSS-SCEEEEECSSC---------CCHHHHHH
T ss_pred HHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH--H---HCC-CcEEEEECCCC---------CChHHHHH
Confidence 466777777776432 377777654332 2333333210 0 011 12677654332 48888888
Q ss_pred HHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhCCCcE
Q 015713 200 QFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDTKADI 243 (402)
Q Consensus 200 ~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~~adi 243 (402)
.++... ..+.++++.+|.....+ +..+++...+....+
T Consensus 108 ~g~~~A------~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 108 KGAAVS------RGQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp HHHHHC------CSSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred HHHHhc------cCCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 876554 46899999999987766 678887776655443
No 66
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=58.83 E-value=84 Score=31.20 Aligned_cols=92 Identities=9% Similarity=0.094 Sum_probs=56.4
Q ss_pred HHHHHHHHhHhCCC----CeEEEEccCC-chhHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCccccCChHHHHHH
Q 015713 126 LIDIPMSNCINSGF----NKIFIMTQFN-SFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQ 200 (402)
Q Consensus 126 LId~~i~~l~~~GI----~~IiVv~~~~-~~~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~~Gta~Al~~ 200 (402)
.|...|+.+.+.-. -+|+||-... ...+...+. .+ . .|.++..... .|-+.|...
T Consensus 81 ~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~-~~--------~--~v~vi~~~~n---------~G~~~A~N~ 140 (501)
T 2ffu_A 81 ALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLG-KI--------E--KVRVLRNDRR---------EGLMRSRVR 140 (501)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGG-GB--------T--TEEEEECSSC---------CHHHHHHHH
T ss_pred HHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHh-cC--------C--CEEEEECCCC---------cCHHHHHHH
Confidence 56677777666322 2777775532 233332221 21 1 2677654332 478888887
Q ss_pred HHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhCCCcE
Q 015713 201 FIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDTKADI 243 (402)
Q Consensus 201 ~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~~adi 243 (402)
++... ..+.++++.+|.....+ +..+++...+....+
T Consensus 141 G~~~A------~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~v 178 (501)
T 2ffu_A 141 GADAA------QAKVLTFLDSHCECNEHWLEPLLERVAEDRTRV 178 (501)
T ss_dssp HHHHC------CSSEEEECCSSEEECTTCHHHHHHHHHHCTTEE
T ss_pred HHHhc------CCCEEEEECCCcccCccHHHHHHHHHHhCCCeE
Confidence 76554 46889999999977665 788888776665543
No 67
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=54.27 E-value=1.1e+02 Score=31.08 Aligned_cols=101 Identities=14% Similarity=0.205 Sum_probs=61.0
Q ss_pred eecCCcc-hHHHHHHHHhHhCCC-C---eEEEEccCCc-hhHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCcccc
Q 015713 118 VPIGGNY-RLIDIPMSNCINSGF-N---KIFIMTQFNS-FSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWF 191 (402)
Q Consensus 118 vpIgG~~-pLId~~i~~l~~~GI-~---~IiVv~~~~~-~~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~ 191 (402)
+|.-+.. ..|...|+.+.+... . +|+||-.... ..+.+.+.+ | .. .+ ..|.++...+.
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~-~-~~---~~--~~v~vi~~~~n--------- 181 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLED-Y-MA---LF--PSVRILRTKKR--------- 181 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHH-H-HT---TS--TTEEEEECSSC---------
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHH-H-HH---hC--CeEEEEECCCC---------
Confidence 4445553 577778888776432 2 7777765432 222333332 1 01 11 13777764332
Q ss_pred CChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhCC
Q 015713 192 QGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDTK 240 (402)
Q Consensus 192 ~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~~ 240 (402)
.|-+.|...++... ..+.++++.+|.....+ +..+++...+..
T Consensus 182 ~G~~~A~N~G~~~A------~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~ 225 (570)
T 2d7i_A 182 EGLIRTRMLGASVA------TGDVITFLDSHCEANVNWLPPLLDRIARNR 225 (570)
T ss_dssp CCHHHHHHHHHHHC------CSSEEEECCSSEEECTTCSHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHhc------CCCEEEEEcCCccccccHHHHHHHHHHhCC
Confidence 48888888887554 46899999999988766 577777766544
No 68
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=54.25 E-value=97 Score=31.58 Aligned_cols=105 Identities=7% Similarity=-0.018 Sum_probs=62.4
Q ss_pred eecCCcchHHHHHHHHhHhCC---CCeEEEEccCCchhHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCccccCCh
Q 015713 118 VPIGGNYRLIDIPMSNCINSG---FNKIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGT 194 (402)
Q Consensus 118 vpIgG~~pLId~~i~~l~~~G---I~~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~~Gt 194 (402)
+|.-+....|..+++.+.... --+|+||-........+.+. .+ .. ...+.++..... -.|-
T Consensus 99 Ip~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~-~~--~~-----~~~i~~i~~~~~--------~~g~ 162 (625)
T 2z86_A 99 IPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVR-EF--ES-----LLNIKYVRQKDY--------GYQL 162 (625)
T ss_dssp EEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHH-TT--TT-----TSCEEEEEECCC--------SCCH
T ss_pred EecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHH-Hh--hh-----cCCeEEEEeCCC--------Ccch
Confidence 344454467888888887753 34677776544443333333 32 11 012555543221 1257
Q ss_pred HHHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhCCCcEE
Q 015713 195 ADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDTKADIT 244 (402)
Q Consensus 195 a~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~~adit 244 (402)
+.++..++... ..+.++++.+|.+...+ +..+++...+.+..+.
T Consensus 163 ~~a~N~g~~~a------~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~ 207 (625)
T 2z86_A 163 CAVRNLGLRAA------KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVAL 207 (625)
T ss_dssp HHHHHHHHHHC------CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEE
T ss_pred hHHHHHHHHhC------CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEE
Confidence 78887776554 46899999999988777 4667776665554433
No 69
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=52.16 E-value=1e+02 Score=31.39 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=59.4
Q ss_pred eecCCcchHHHHHHHHhHhCCCC--eEEEEccCCchhHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCccccCChH
Q 015713 118 VPIGGNYRLIDIPMSNCINSGFN--KIFIMTQFNSFSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTA 195 (402)
Q Consensus 118 vpIgG~~pLId~~i~~l~~~GI~--~IiVv~~~~~~~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~~~~~Gta 195 (402)
+|.-+....|..+|+.+.+.... +|+|+-......-.+.+.+.. .. ...|.++...+ .|-+
T Consensus 381 i~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~--~~-----~~~i~~~~~~n----------~G~~ 443 (625)
T 2z86_A 381 IPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHY--AN-----HPRVRFISQKN----------KGIG 443 (625)
T ss_dssp EEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHH--TT-----CTTEEEEEECC----------CCHH
T ss_pred EeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHH--hh-----CCcEEEEeCCC----------CCHH
Confidence 34445447888899998775332 666665433332233333211 11 11266664221 4888
Q ss_pred HHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhC
Q 015713 196 DAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDT 239 (402)
Q Consensus 196 ~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~ 239 (402)
.++..++... ..+.++++.+|.+...+ +..+++...+.
T Consensus 444 ~a~n~g~~~a------~g~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 444 SASNTAVRLC------RGFYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp HHHHHHHHHC------CSSEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred HHHHHHHHhc------CCCEEEEECCCcccChhHHHHHHHHHHhC
Confidence 8888877554 46899999999988776 56677666543
No 70
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=47.94 E-value=1.6e+02 Score=27.28 Aligned_cols=51 Identities=10% Similarity=0.065 Sum_probs=36.0
Q ss_pred CChHHHHHHHHHHHHhhhcCCCceEEEEcCCcc-CCcc-HHHHHHHHHh-CCCcEEEEEE
Q 015713 192 QGTADAVRQFIWVFEDAKNKNVENVLILSGDHL-YRMD-YTEFLQKHID-TKADITVSCV 248 (402)
Q Consensus 192 ~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l-~~~d-i~~~l~~h~~-~~aditi~~~ 248 (402)
.|-+.|+..++... ..+.++++.+|.+ +..+ +..+++...+ .+.+++....
T Consensus 117 ~G~~~a~n~g~~~a------~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~ 170 (329)
T 3ckj_A 117 PGKGEALWRSLAAS------RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFY 170 (329)
T ss_dssp CSHHHHHHHHHHHC------CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEE
T ss_pred CCHHHHHHHHHHhC------CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEe
Confidence 58889998887554 4689999999998 7766 5777776444 3556554443
No 71
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=35.64 E-value=1.6e+02 Score=28.43 Aligned_cols=52 Identities=17% Similarity=0.206 Sum_probs=37.6
Q ss_pred CChHHHHHHHHHHHHhhhcCCCceEEEEcCCcc-CCcc-HHHHHHHHHhC-CCcEEEEEEE
Q 015713 192 QGTADAVRQFIWVFEDAKNKNVENVLILSGDHL-YRMD-YTEFLQKHIDT-KADITVSCVP 249 (402)
Q Consensus 192 ~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l-~~~d-i~~~l~~h~~~-~aditi~~~~ 249 (402)
.|-+.|+..++... ..+.++++.+|.. +..+ +..+++...+. ++++++....
T Consensus 165 ~G~g~A~n~G~~~A------~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~ 219 (387)
T 3f1y_A 165 HGKGDAMWRALSVT------RGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYR 219 (387)
T ss_dssp CSHHHHHHHHTTTC------CSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEE
T ss_pred CCHHHHHHHHHHhc------CCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeec
Confidence 58889988876433 4688999999998 6765 67777776554 5777666553
No 72
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=34.47 E-value=2.4e+02 Score=29.47 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=62.6
Q ss_pred ecCCcchHHHHHHHHhHhC-----CCCeEEEEccCCc-----hhHHHHHHhhccCCCCcccCCCcEEEEecccCCCcCCc
Q 015713 119 PIGGNYRLIDIPMSNCINS-----GFNKIFIMTQFNS-----FSLNRHLARSYNLGNGVNFGDGFVEVLAATQTPGEAGK 188 (402)
Q Consensus 119 pIgG~~pLId~~i~~l~~~-----GI~~IiVv~~~~~-----~~i~~~l~~~y~~~~g~~~~~~~V~vl~~~q~~~~~g~ 188 (402)
|.-+....|...|+.+.+. .+.+|+||=+... ..+.+.+.... ..|.++... .
T Consensus 187 ptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~----------~~I~vI~~~-N------ 249 (657)
T 4fix_A 187 PTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG----------SRLSIHDQP-N------ 249 (657)
T ss_dssp CBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG----------GGEEEEECC-C------
T ss_pred EecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC----------CCEEEEECC-C------
Confidence 3334447888888888764 2347777755321 12333333221 126676533 1
Q ss_pred cccCChHHHHHHHHHHHHhhhcCCCceEEEEcCCccCCcc-HHHHHHHHHhCCCcEEEE
Q 015713 189 KWFQGTADAVRQFIWVFEDAKNKNVENVLILSGDHLYRMD-YTEFLQKHIDTKADITVS 246 (402)
Q Consensus 189 ~~~~Gta~Al~~~~~~l~~~~~~~~e~~Lvl~gD~l~~~d-i~~~l~~h~~~~aditi~ 246 (402)
.|-+.+...++..... ....+.+++++.|.+...+ +..+++..........+.
T Consensus 250 ---~G~a~a~N~Gl~~A~g--~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg 303 (657)
T 4fix_A 250 ---LGGSGGYSRVMYEALK--NTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVG 303 (657)
T ss_dssp ---CHHHHHHHHHHHHHHH--HCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEE
T ss_pred ---CCHHHHHHHHHHHHHh--cCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEE
Confidence 4777777777665531 0135789999999988776 577777776654433333
Done!