Query 015715
Match_columns 402
No_of_seqs 140 out of 162
Neff 3.8
Searched_HMMs 46136
Date Fri Mar 29 08:54:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015715.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015715hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05212 DUF707: Protein of un 100.0 4E-125 9E-130 911.4 26.5 291 68-380 3-293 (294)
2 TIGR01556 rhamnosyltran L-rham 93.4 0.29 6.3E-06 46.0 7.5 128 184-325 72-202 (281)
3 cd04185 GT_2_like_b Subfamily 92.6 0.34 7.4E-06 42.5 6.3 100 184-328 78-177 (202)
4 cd04186 GT_2_like_c Subfamily 91.1 0.49 1.1E-05 39.1 5.3 91 185-324 74-165 (166)
5 cd02510 pp-GalNAc-T pp-GalNAc- 90.7 5.6 0.00012 38.0 12.7 139 184-326 82-227 (299)
6 cd02526 GT2_RfbF_like RfbF is 84.9 2.2 4.8E-05 38.2 5.8 124 185-324 75-204 (237)
7 cd02520 Glucosylceramide_synth 82.6 1.4 3E-05 39.1 3.5 92 184-324 85-176 (196)
8 PF13641 Glyco_tranf_2_3: Glyc 82.4 2.5 5.4E-05 37.8 5.0 193 111-325 3-211 (228)
9 cd06442 DPM1_like DPM1_like re 76.9 1.2 2.5E-05 39.5 1.1 36 184-219 77-112 (224)
10 cd04195 GT2_AmsE_like GT2_AmsE 76.8 1.4 3.1E-05 38.4 1.6 39 184-222 79-118 (201)
11 PF01762 Galactosyl_T: Galacto 76.7 11 0.00023 34.3 7.3 176 91-307 6-186 (195)
12 cd06433 GT_2_WfgS_like WfgS an 71.2 5.3 0.00012 34.0 3.7 37 184-220 74-111 (202)
13 COG1216 Predicted glycosyltran 67.7 25 0.00053 34.2 7.9 133 186-325 85-221 (305)
14 PF00535 Glycos_transf_2: Glyc 66.3 4.8 0.0001 32.8 2.3 38 184-221 77-114 (169)
15 PLN02726 dolichyl-phosphate be 64.9 7.8 0.00017 35.8 3.7 124 184-324 92-218 (243)
16 PF09258 Glyco_transf_64: Glyc 64.7 7.9 0.00017 37.6 3.9 95 118-213 8-103 (247)
17 cd06434 GT2_HAS Hyaluronan syn 64.3 3.8 8.1E-05 36.7 1.5 41 184-224 76-116 (235)
18 cd06421 CESA_CelA_like CESA_Ce 63.6 6 0.00013 35.1 2.6 124 184-325 83-212 (234)
19 cd04188 DPG_synthase DPG_synth 61.3 3.8 8.2E-05 36.5 0.9 36 184-219 81-116 (211)
20 cd02525 Succinoglycan_BP_ExoA 61.1 6.8 0.00015 34.9 2.5 127 184-325 80-209 (249)
21 cd06435 CESA_NdvC_like NdvC_li 56.2 6.3 0.00014 35.4 1.5 37 185-221 84-120 (236)
22 KOG2264 Exostosin EXT1L [Signa 55.0 14 0.00031 41.0 4.1 97 117-214 631-753 (907)
23 PTZ00260 dolichyl-phosphate be 49.6 17 0.00036 36.4 3.4 189 108-318 69-286 (333)
24 cd06437 CESA_CaSu_A2 Cellulose 42.0 15 0.00032 33.2 1.6 127 184-325 86-214 (232)
25 cd06423 CESA_like CESA_like is 40.7 17 0.00037 29.3 1.6 38 185-222 78-116 (180)
26 cd00761 Glyco_tranf_GTA_type G 40.7 23 0.00051 27.7 2.3 22 185-206 77-98 (156)
27 PF10111 Glyco_tranf_2_2: Glyc 39.9 38 0.00082 32.7 4.0 95 113-208 2-111 (281)
28 cd04184 GT2_RfbC_Mx_like Myxoc 39.3 24 0.00051 30.7 2.4 37 184-220 82-119 (202)
29 PF13506 Glyco_transf_21: Glyc 39.0 22 0.00047 32.4 2.2 122 184-324 30-153 (175)
30 cd04192 GT_2_like_e Subfamily 38.4 25 0.00054 30.9 2.4 37 184-220 81-117 (229)
31 cd04196 GT_2_like_d Subfamily 35.0 30 0.00065 30.1 2.3 46 274-324 158-203 (214)
32 cd06427 CESA_like_2 CESA_like_ 34.3 38 0.00082 31.1 3.0 38 184-221 83-122 (241)
33 cd06439 CESA_like_1 CESA_like_ 34.2 23 0.0005 32.1 1.5 40 184-223 108-147 (251)
34 cd02522 GT_2_like_a GT_2_like_ 34.1 30 0.00064 30.5 2.2 41 184-224 71-111 (221)
35 KOG2287 Galactosyltransferases 33.8 71 0.0015 32.6 5.1 183 81-308 100-293 (349)
36 TIGR03469 HonB hopene-associat 31.9 45 0.00097 33.7 3.3 34 185-218 133-166 (384)
37 cd06420 GT2_Chondriotin_Pol_N 30.1 35 0.00077 29.1 1.9 26 184-209 78-103 (182)
38 PF12996 DUF3880: DUF based on 28.6 29 0.00063 27.9 1.1 16 180-195 13-28 (79)
39 KOG0747 Putative NAD+-dependen 28.0 87 0.0019 32.5 4.5 75 108-182 6-81 (331)
40 PHA03165 hypothetical protein; 27.8 44 0.00096 26.0 1.9 32 30-70 23-54 (57)
41 PRK10073 putative glycosyl tra 25.0 66 0.0014 32.0 3.1 107 108-219 5-119 (328)
42 cd06913 beta3GnTL1_like Beta 1 25.0 76 0.0016 28.4 3.2 31 184-214 83-113 (219)
43 cd00505 Glyco_transf_8 Members 24.6 1.5E+02 0.0032 28.0 5.2 89 109-209 30-118 (246)
44 PF12621 DUF3779: Phosphate me 24.4 41 0.00088 28.4 1.3 43 175-221 34-76 (95)
45 PF02593 dTMP_synthase: Thymid 24.4 3.4E+02 0.0073 26.6 7.6 90 114-221 2-110 (217)
46 PF09828 Chrome_Resist: Chroma 24.1 57 0.0012 29.9 2.2 48 171-224 15-80 (135)
47 cd06430 GT8_like_2 GT8_like_2 22.5 2E+02 0.0043 29.5 5.9 102 111-214 2-124 (304)
48 PF11057 Cortexin: Cortexin of 22.3 84 0.0018 26.6 2.6 49 1-49 1-52 (81)
49 KOG1555 26S proteasome regulat 22.0 40 0.00088 34.7 0.9 41 255-295 80-120 (316)
50 cd06438 EpsO_like EpsO protein 21.8 91 0.002 27.2 3.0 29 184-212 80-108 (183)
51 KOG3708 Uncharacterized conser 21.2 47 0.001 36.8 1.2 142 138-327 52-197 (681)
52 PLN02867 Probable galacturonos 20.7 40 0.00088 37.0 0.7 34 175-209 334-367 (535)
53 PF13632 Glyco_trans_2_3: Glyc 20.2 62 0.0013 28.4 1.6 124 188-325 1-124 (193)
54 PF06679 DUF1180: Protein of u 20.0 1.5E+02 0.0033 27.8 4.2 25 23-47 94-118 (163)
No 1
>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana.
Probab=100.00 E-value=4.3e-125 Score=911.45 Aligned_cols=291 Identities=60% Similarity=1.129 Sum_probs=278.1
Q ss_pred cccCCCCCCCCCCCccccCCCcccccCCCCCCcCccCCCCCCceEEEEeccCcccccHHHHHhhcCCCCcEEEEEEeCCC
Q 015715 68 SRFSSGRLKSLPRGIVQARSDLELRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGD 147 (402)
Q Consensus 68 ~~~~~~g~e~LP~giv~~~sd~~lr~Lwg~p~~~~~~~~~~~k~Lva~~VG~kqk~~Vd~~v~kf~~~nFdv~LFhYDg~ 147 (402)
.+++|+|+|+||+|||+++|||+||||||.|+++. +.++|||||||||+|||++||++|+|| ++|||||||||||+
T Consensus 3 ~~~~p~g~e~Lp~giv~~~sd~~~r~lw~~p~~~~---~~~~k~Lla~~VG~kqk~~vd~~v~Kf-~~nF~i~LfhYDg~ 78 (294)
T PF05212_consen 3 VPCNPRGAERLPPGIVVRESDLELRPLWGNPSEDL---PKKPKYLLAMTVGIKQKDNVDAIVKKF-SDNFDIMLFHYDGR 78 (294)
T ss_pred cCCCCCccccCCCCccccCCCceeeecCCCccccc---cCCCceEEEEEecHHHHhhhhHHHhhh-ccCceEEEEEecCC
Confidence 46899999999999999999999999999999887 367899999999999999999999999 89999999999999
Q ss_pred CCccCccCcCCceEEEEeeccchhhhhccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCC
Q 015715 148 VNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNST 227 (402)
Q Consensus 148 vd~W~d~~ws~~aiHvsa~kqtKWw~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~ 227 (402)
+|+|++|+||++||||++.|||||||||||||||||++|||||||||||+||+|+|+|||+||++||||||||||+++++
T Consensus 79 vd~w~~~~ws~~aiHv~~~kqtKww~akrfLHPdiv~~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~ 158 (294)
T PF05212_consen 79 VDEWDDFEWSDRAIHVSARKQTKWWFAKRFLHPDIVAPYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSS 158 (294)
T ss_pred cCchhhcccccceEEEEeccceEEeehhhhcChhhhccceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ceeeeeeeeecCcccceeeeeccCCccccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcC
Q 015715 228 EIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQG 307 (402)
Q Consensus 228 ~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g 307 (402)
++||+||+|++.++||| +.++++.|.+++++||||||||||||||||+||+||||||||||+|||||||+|++|+ +
T Consensus 159 ~~~~~iT~R~~~~~vhr---~~~~~~~~~~~~~~ppct~fVEiMAPVFSr~Awrcvw~miqNDLvhGWGLDf~~~~c~-~ 234 (294)
T PF05212_consen 159 EIHHPITKRRPDSEVHR---KTRGGPRCCDDSTGPPCTGFVEIMAPVFSRAAWRCVWHMIQNDLVHGWGLDFKWGYCA-G 234 (294)
T ss_pred eeeeeEEeecCCceeEe---ccCCCCCcCCCCCCCCcceEEEEecceechHHHHHHHhcccCCCccccchhhhHHHHh-c
Confidence 99999999999999998 4577888989999999999999999999999999999999999999999999999999 5
Q ss_pred CCCCcEEEEeeeeEEecccCCCCCCCCCCccchhhhhhhcCCCCCCcchHHHHHhhHHHHHHHHHHHHHHHhc
Q 015715 308 DRTKNVGIIDSEYVVHQGIQTLGGQPPTRKSTKREELAKRHGPAPVDLRAEIRRQSTMELQIFKKRWNEAIEQ 380 (402)
Q Consensus 308 ~~~~kiGVVDa~~VvH~~~ptlGg~~~~~~~~~~~~~~~~~~~~~~~~r~~vr~r~~~E~~~f~~R~~~A~~~ 380 (402)
++++||||||||||+|+++|||||++.+++ +.++|.+||+||++||++|++||++|++|
T Consensus 235 ~~~~kiGVVDs~~VvH~gvptLG~~~~~~~--------------~~~~~~~Vr~r~~~E~~~F~~R~~~a~~~ 293 (294)
T PF05212_consen 235 DRHKKIGVVDSQYVVHTGVPTLGGQGNSEK--------------GKDPREEVRRRSFAEMRIFQKRWANAVKE 293 (294)
T ss_pred cccccEEEEeeEEEEEcCCCcCCCcccccc--------------CCchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 799999999999999999999999876432 23578999999999999999999999986
No 2
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=93.41 E-value=0.29 Score=46.02 Aligned_cols=128 Identities=14% Similarity=0.073 Sum_probs=72.7
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHh--CCccccCCc-CCCCCceeeeeeeeecCcccceeeeeccCCccccCCCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE--GFEISQPAL-DPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISE 260 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~--gLeISQPAL-d~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~ 260 (402)
+.||||++.|+|..++.-.+.++++.+++. +.-+..|.. +.+.+ ...+...... . .-+.. ...+ .+
T Consensus 72 ~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~-------~~~~-~~ 140 (281)
T TIGR01556 72 RGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGTS-RRLPAIHLDG-L-LLRQI-------SLDG-LT 140 (281)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCCc-ccCCceeecc-c-ceeee-------cccc-cC
Confidence 379999999999999998999999988876 567777764 33221 1122211111 0 00000 0000 00
Q ss_pred CCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 261 GPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 261 ~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
.+.-+.++=.-+.+++|++++.+= .+..++ -.++.|.-|..-+. ..+.+|.++....+.|..
T Consensus 141 ~~~~~~~~~~sg~li~~~~~~~iG-~fde~~-fi~~~D~e~~~R~~-~~G~~i~~~~~~~~~H~~ 202 (281)
T TIGR01556 141 TPQKTSFLISSGCLITREVYQRLG-MMDEEL-FIDHVDTEWSLRAQ-NYGIPLYIDPDIVLEHRI 202 (281)
T ss_pred CceeccEEEcCcceeeHHHHHHhC-CccHhh-cccchHHHHHHHHH-HCCCEEEEeCCEEEEEec
Confidence 111111110012368999998774 344434 34567766653333 135789999999999973
No 3
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=92.57 E-value=0.34 Score=42.52 Aligned_cols=100 Identities=19% Similarity=0.226 Sum_probs=64.4
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP 263 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~pp 263 (402)
+.+|||++.|+|..++...+.++.+.++..++.+..|..-...+ +
T Consensus 78 ~~~d~v~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~ 122 (202)
T cd04185 78 LGYDWIWLMDDDAIPDPDALEKLLAYADKDNPQFLAPLVLDPDG-----------------------------------S 122 (202)
T ss_pred cCCCEEEEeCCCCCcChHHHHHHHHHHhcCCceEecceeEcCCC-----------------------------------c
Confidence 57999999999999998888888887764444444433211110 1
Q ss_pred ccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecccCC
Q 015715 264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQT 328 (402)
Q Consensus 264 cTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~~pt 328 (402)
+.+ -+++|++|..+ ..+. +.-..||=|.-+..-+.. .+.++ .+.+..+.|....+
T Consensus 123 ~~~------~~~~~~~~~~~-g~~~-~~~~~~~eD~~~~~r~~~-~G~~i-~~~~~~~~h~~~~~ 177 (202)
T cd04185 123 FVG------VLISRRVVEKI-GLPD-KEFFIWGDDTEYTLRASK-AGPGI-YVPDAVVVHKTAIN 177 (202)
T ss_pred eEE------EEEeHHHHHHh-CCCC-hhhhccchHHHHHHHHHH-cCCcE-EecceEEEEccccc
Confidence 111 14888888866 2332 334678877665543331 35688 99999999996443
No 4
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=91.14 E-value=0.49 Score=39.13 Aligned_cols=91 Identities=19% Similarity=0.159 Sum_probs=60.0
Q ss_pred CccEEEEeccccccCCCCHHHHHHHHHHh-CCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCC
Q 015715 185 NYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP 263 (402)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~pp 263 (402)
.+|||++.|+|..++...+.++.+.+.+. +..+..+.
T Consensus 74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------------------ 111 (166)
T cd04186 74 KGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK------------------------------------------ 111 (166)
T ss_pred CCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc------------------------------------------
Confidence 79999999999999888888887754443 22222222
Q ss_pred ccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715 264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324 (402)
Q Consensus 264 cTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~ 324 (402)
+=.-+.+|++++++.+-. +.. ....+|-|..+...+.. .+.+|..+....+.|.
T Consensus 112 ----~~~~~~~~~~~~~~~~~~-~~~-~~~~~~eD~~~~~~~~~-~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 112 ----VSGAFLLVRREVFEEVGG-FDE-DFFLYYEDVDLCLRARL-AGYRVLYVPQAVIYHH 165 (166)
T ss_pred ----CceeeEeeeHHHHHHcCC-CCh-hhhccccHHHHHHHHHH-cCCeEEEccceEEEec
Confidence 001245789999987532 332 22237777776654432 4679999999999996
No 5
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=90.67 E-value=5.6 Score=37.98 Aligned_cols=139 Identities=14% Similarity=0.074 Sum_probs=75.2
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCC-ceeeeeeee-ecC---cccceeeeeccCCccccCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNST-EIHHKFTIR-ART---KKFHRRVYDLRGSVKCTNI 258 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~-~i~h~iT~R-~~~---~~vHr~~~~~~g~~~C~~~ 258 (402)
+..|||++.|.|..++..-++++++.+....-.+.-|.+..-.+ ...+.-... ... ..++...........+...
T Consensus 82 A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (299)
T cd02510 82 ATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEERRRES 161 (299)
T ss_pred ccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHhhhcC
Confidence 67899999999999999999999999998887777787653221 112221110 000 0011000000000000111
Q ss_pred CCCCCccceEEEeccccChhHHHHhhhhhccCCCcccc-hhhhhh-hhhcCCCCCcEEEEeeeeEEeccc
Q 015715 259 SEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWG-MDMKLG-YCAQGDRTKNVGIIDSEYVVHQGI 326 (402)
Q Consensus 259 ~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWG-LDf~w~-~Ca~g~~~~kiGVVDa~~VvH~~~ 326 (402)
...+..+.++-..+=+|+|++|..+=. |.. ....|| =|.-+. ++.+ .+.+|-++-...|.|...
T Consensus 162 ~~~~~~~~~~~g~~~~irr~~~~~vGg-fDe-~~~~~~~ED~Dl~~R~~~--~G~~i~~~p~a~v~H~~~ 227 (299)
T cd02510 162 PTAPIRSPTMAGGLFAIDREWFLELGG-YDE-GMDIWGGENLELSFKVWQ--CGGSIEIVPCSRVGHIFR 227 (299)
T ss_pred CCCCccCccccceeeEEEHHHHHHhCC-CCC-cccccCchhHHHHHHHHH--cCCeEEEeeccEEEEecc
Confidence 112222333323233588999987743 443 345565 343332 2222 246899999999999853
No 6
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=84.91 E-value=2.2 Score=38.16 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=61.6
Q ss_pred CccEEEEeccccccCCCCHHHHH---HHHH-HhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCC
Q 015715 185 NYDYIFLWDEDLGVENFDPRRYL---EIVK-SEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISE 260 (402)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ryf---~Ivr-~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~ 260 (402)
.||||++.|+|..++...+.+++ +... ...+-+..|.............. +.....+. .. .+.
T Consensus 75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~------~~~---- 141 (237)
T cd02526 75 GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGV-RKSGYKLR--IQ------KEG---- 141 (237)
T ss_pred CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccce-eccCccce--ec------ccc----
Confidence 68999999999999988888885 2222 22344555543322211111110 00000000 00 000
Q ss_pred CCCccceEEEe--ccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715 261 GPPCTGFVEGM--APVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324 (402)
Q Consensus 261 ~ppcTgFVEIM--APVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~ 324 (402)
..++...-.++ +-+|+|++++.+=. +..+. ...|-|..|...+. ..+.++..+....|.|.
T Consensus 142 ~~~~~~~~~~~~~~~~~rr~~~~~~gg-fd~~~-~~~~eD~d~~~r~~-~~G~~~~~~~~~~v~h~ 204 (237)
T cd02526 142 EEGLKEVDFLITSGSLISLEALEKVGG-FDEDL-FIDYVDTEWCLRAR-SKGYKIYVVPDAVLKHE 204 (237)
T ss_pred cCCceEeeeeeccceEEcHHHHHHhCC-CCHHH-cCccchHHHHHHHH-HcCCcEEEEcCeEEEec
Confidence 00010000111 12589999998754 33222 23355655554333 23568988888888887
No 7
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=82.64 E-value=1.4 Score=39.13 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=54.1
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPP 263 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~pp 263 (402)
+.+|||++.|.|..++...+.++++.....+..+.++. |
T Consensus 85 a~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~---------------------------------~-------- 123 (196)
T cd02520 85 ARYDILVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL---------------------------------C-------- 123 (196)
T ss_pred CCCCEEEEECCCceEChhHHHHHHHHhhCCCCCeEEee---------------------------------c--------
Confidence 57999999999998877777777655422111111111 0
Q ss_pred ccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715 264 CTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324 (402)
Q Consensus 264 cTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~ 324 (402)
++ ..+=+|+|++++.+=.+ . ....-.+=|+.+...+.. .+.+|.+++.. ++|.
T Consensus 124 ~~----g~~~~~r~~~~~~~ggf-~-~~~~~~~eD~~l~~rl~~-~G~~i~~~~~~-~~~~ 176 (196)
T cd02520 124 AF----GKSMALRREVLDAIGGF-E-AFADYLAEDYFLGKLIWR-LGYRVVLSPYV-VMQP 176 (196)
T ss_pred cc----CceeeeEHHHHHhccCh-H-HHhHHHHHHHHHHHHHHH-cCCeEEEcchh-eecc
Confidence 00 12337889998876432 1 112234568777755542 46789888774 5555
No 8
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=82.38 E-value=2.5 Score=37.75 Aligned_cols=193 Identities=16% Similarity=0.130 Sum_probs=88.5
Q ss_pred eEEEEeccCcccccHHHHHhhcCC---CCcEEEEEEeCCCCCccCc-c-----CcCCceEEEEee---cc--chhhhhcc
Q 015715 111 NLLAIPAGIKQKDNVDAIVRKFLP---ENFTVILFHYDGDVNAWRG-L-----DWSNKAIHIAAQ---NQ--TKWWFAKR 176 (402)
Q Consensus 111 ~Lva~~VG~kqk~~Vd~~v~kf~~---~nFdv~LFhYDg~vd~W~d-~-----~ws~~aiHvsa~---kq--tKWw~akR 176 (402)
-.|++++-.. ...+...|+-... .++.|+++.-+. .++=.+ + .+....+++... .+ +|-..+..
T Consensus 3 v~Vvip~~~~-~~~l~~~l~sl~~~~~~~~~v~vvd~~~-~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~n~ 80 (228)
T PF13641_consen 3 VSVVIPAYNE-DDVLRRCLESLLAQDYPRLEVVVVDDGS-DDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARALNE 80 (228)
T ss_dssp EEEE--BSS--HHHHHHHHHHHTTSHHHTEEEEEEEE-S-SS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHHHHH
T ss_pred EEEEEEecCC-HHHHHHHHHHHHcCCCCCeEEEEEECCC-ChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHHHHH
Confidence 4556665443 2345555554432 568888877333 222111 1 233323454322 22 34444444
Q ss_pred ccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCc--ccceeeeeccCCcc
Q 015715 177 FLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTK--KFHRRVYDLRGSVK 254 (402)
Q Consensus 177 FLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~--~vHr~~~~~~g~~~ 254 (402)
.+. ...+|||++.|+|..++...+.++++.+...+..+.++........ ..++.-.... .-|..++ .
T Consensus 81 ~~~---~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~ 149 (228)
T PF13641_consen 81 ALA---AARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDNDR--NWLTRLQDLFFARWHLRFR------S 149 (228)
T ss_dssp HHH---H---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTCC--CEEEE-TT--S-EETTTS-------T
T ss_pred HHH---hcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCCC--CHHHHHHHHHHhhhhhhhh------h
Confidence 442 1459999999999999999999999999778888888665332211 1111111100 0000000 0
Q ss_pred ccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 255 CTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 255 C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
.........++| -+=+|+|+++..+-. |.. ..-|=|+.+...+.. .+.+|.......|.|..
T Consensus 150 ~~~~~~~~~~~G----~~~~~rr~~~~~~g~-fd~---~~~~eD~~l~~r~~~-~G~~~~~~~~~~v~~~~ 211 (228)
T PF13641_consen 150 GRRALGVAFLSG----SGMLFRRSALEEVGG-FDP---FILGEDFDLCLRLRA-AGWRIVYAPDALVYHEE 211 (228)
T ss_dssp T-B----S-B------TEEEEEHHHHHHH-S---S---SSSSHHHHHHHHHHH-TT--EEEEEEEEEEE--
T ss_pred hhcccceeeccC----cEEEEEHHHHHHhCC-CCC---CCcccHHHHHHHHHH-CCCcEEEECCcEEEEeC
Confidence 000000111111 122589999988863 322 444577777643332 46789999888888884
No 9
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=76.87 E-value=1.2 Score=39.49 Aligned_cols=36 Identities=22% Similarity=0.150 Sum_probs=26.4
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCcccc
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQ 219 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQ 219 (402)
+..|||++.|+|..++...+.++++.+...+..+..
T Consensus 77 a~gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 112 (224)
T cd06442 77 ARGDVIVVMDADLSHPPEYIPELLEAQLEGGADLVI 112 (224)
T ss_pred cCCCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEE
Confidence 456999999999888777777777776555555433
No 10
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=76.76 E-value=1.4 Score=38.39 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=31.1
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHh-CCccccCCc
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPAL 222 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPAL 222 (402)
+.+|||++.|+|..++.-.++++++.+.++ +..+..+..
T Consensus 79 a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~ 118 (201)
T cd04195 79 CTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGV 118 (201)
T ss_pred cCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccE
Confidence 579999999999999988889988887654 566665543
No 11
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=76.72 E-value=11 Score=34.33 Aligned_cols=176 Identities=19% Similarity=0.277 Sum_probs=93.0
Q ss_pred cccCCCCCCcCccCCCCCCceEEEEeccCcc--cccHHHHHhhcCCCCcEEEEEEeCCCCCccCccCcCCceEEEEeecc
Q 015715 91 LRPLWSTSSSRKKFGVYSNRNLLAIPAGIKQ--KDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQ 168 (402)
Q Consensus 91 lr~Lwg~p~~~~~~~~~~~k~Lva~~VG~kq--k~~Vd~~v~kf~~~nFdv~LFhYDg~vd~W~d~~ws~~aiHvsa~kq 168 (402)
+|.-||++..-. ..+.-+.+=+|... ...++..|++-....=||+++.+ .|.+..+.. +.+ -.
T Consensus 6 IR~TW~~~~~~~-----~~~~~~~FvvG~~~~~~~~~~~~l~~E~~~y~Dil~~d~---~D~y~nlt~--K~~-----~~ 70 (195)
T PF01762_consen 6 IRETWGNQRNFK-----GVRVKVVFVVGESPNSDSDLQEALQEEAEKYGDILQGDF---VDSYRNLTL--KTL-----AG 70 (195)
T ss_pred HHHHHhcccccC-----CCcEEEEEEEecCCCCcHHHHHHhhhhhhhcCceEeeec---ccccchhhH--HHH-----HH
Confidence 466788666422 24456666778776 44567767653333447877665 344444310 110 11
Q ss_pred chhhhhccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcc--cceee
Q 015715 169 TKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKK--FHRRV 246 (402)
Q Consensus 169 tKWw~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~--vHr~~ 246 (402)
-+|-. + | ...++||+..|||+-| ++.++++..++.-.+.+.+.+... .....-..|++.+. +....
T Consensus 71 ~~w~~-~---~---c~~~~~v~k~DDD~~v---n~~~l~~~L~~~~~~~~~~~~~g~--~~~~~~~~r~~~~kw~v~~~~ 138 (195)
T PF01762_consen 71 LKWAS-K---H---CPNAKYVLKVDDDVFV---NPDRLVSFLKSLKQDPSKNSIYGG--CIKNGPPIRDPSSKWYVSEEE 138 (195)
T ss_pred HHHHH-h---h---CCchhheeecCcEEEE---ehHHhhhhhhhcccCccccccccc--cccCCccccccccCceeeeee
Confidence 12211 1 1 1258999999999988 556666666665333333332221 11122223333322 11111
Q ss_pred eeccCCccccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccchh-hhhhhhhcC
Q 015715 247 YDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMD-MKLGYCAQG 307 (402)
Q Consensus 247 ~~~~g~~~C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLD-f~w~~Ca~g 307 (402)
|. ....| .|....+=++|+++.+.+....+. . .-+-+| -.+|.|++.
T Consensus 139 y~---------~~~yP---~y~~G~~yvls~~~v~~i~~~~~~-~-~~~~~eDv~iGi~~~~ 186 (195)
T PF01762_consen 139 YP---------DDYYP---PYCSGGGYVLSSDVVKRIYKASSH-T-PFFPLEDVFIGILAEK 186 (195)
T ss_pred cc---------cccCC---CcCCCCeEEecHHHHHHHHHHhhc-C-CCCCchHHHHHHHHHH
Confidence 11 11233 345678889999999988866553 3 334455 444888874
No 12
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=71.22 E-value=5.3 Score=33.95 Aligned_cols=37 Identities=8% Similarity=-0.079 Sum_probs=27.3
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHH-HhCCccccC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVK-SEGFEISQP 220 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr-~~gLeISQP 220 (402)
+.+|||++.|+|..++...+.++++... ..+..+..+
T Consensus 74 a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g 111 (202)
T cd06433 74 ATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYG 111 (202)
T ss_pred cCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEe
Confidence 4689999999999999988888884443 334544433
No 13
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=67.66 E-value=25 Score=34.19 Aligned_cols=133 Identities=14% Similarity=0.008 Sum_probs=80.9
Q ss_pred ccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCC----CCC
Q 015715 186 YDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNI----SEG 261 (402)
Q Consensus 186 YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~----~~~ 261 (402)
|+|++++++|..++...++++++.+++.+-...-|++-.+...-.+.-... .........+ ....+... +..
T Consensus 85 ~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~ 160 (305)
T COG1216 85 DDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDRRG-GESDGLTGGW---RASPLLEIAPDLSSY 160 (305)
T ss_pred CcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchheec-cccccccccc---eecccccccccccch
Confidence 459999999999999999999999999988877777655332212221111 1100000000 00111111 111
Q ss_pred CCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 262 PPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 262 ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
+.+..++..-+-+++|++++.+=. +.. .-=.+.-|.-|.+-+.- .+.++..+=.-.|.|..
T Consensus 161 ~~~~~~~~G~~~li~~~~~~~vG~-~de-~~F~y~eD~D~~~R~~~-~G~~i~~~p~a~i~H~~ 221 (305)
T COG1216 161 LEVVASLSGACLLIRREAFEKVGG-FDE-RFFIYYEDVDLCLRARK-AGYKIYYVPDAIIYHKI 221 (305)
T ss_pred hhhhhhcceeeeEEcHHHHHHhCC-CCc-ccceeehHHHHHHHHHH-cCCeEEEeeccEEEEec
Confidence 223335667678899999998875 333 44556677666654442 35589999999999985
No 14
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=66.29 E-value=4.8 Score=32.76 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=30.0
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPA 221 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPA 221 (402)
+..|||++.|+|..++.-.+.++++.+++++-.+.-+.
T Consensus 77 a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~~~~~ 114 (169)
T PF00535_consen 77 AKGEYILFLDDDDIISPDWLEELVEALEKNPPDVVIGS 114 (169)
T ss_dssp --SSEEEEEETTEEE-TTHHHHHHHHHHHCTTEEEEEE
T ss_pred cceeEEEEeCCCceEcHHHHHHHHHHHHhCCCcEEEEE
Confidence 56679999999999999999999999999776554443
No 15
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=64.87 E-value=7.8 Score=35.76 Aligned_cols=124 Identities=10% Similarity=0.052 Sum_probs=65.1
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCC-CCCceeeeeeeeecCcccceeeeeccCCccccCCCCCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDP-NSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGP 262 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~-~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~p 262 (402)
+..|||++.|.|...+...+.++++.+.+.+.++.....-. +.+.-.|....+........ +. ..+. ..
T Consensus 92 a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~-~~-----~~~~----~~ 161 (243)
T PLN02726 92 ASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANV-LA-----QTLL----WP 161 (243)
T ss_pred cCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHH-HH-----HHHh----CC
Confidence 57899999999999988889999988877777665443211 11110111111100000000 00 0000 00
Q ss_pred CccceEEEe--ccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715 263 PCTGFVEGM--APVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324 (402)
Q Consensus 263 pcTgFVEIM--APVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~ 324 (402)
+. ...+ +=+|+|++++.+..+..+ ..-.+.+|+.+.... .+.+|.-|.-.++-|.
T Consensus 162 ~~---~d~~g~~~~~rr~~~~~i~~~~~~-~~~~~~~el~~~~~~---~g~~i~~vp~~~~~r~ 218 (243)
T PLN02726 162 GV---SDLTGSFRLYKRSALEDLVSSVVS-KGYVFQMEIIVRASR---KGYRIEEVPITFVDRV 218 (243)
T ss_pred CC---CcCCCcccceeHHHHHHHHhhccC-CCcEEehHHHHHHHH---cCCcEEEeCcEEeCCC
Confidence 11 1122 336899999998754432 222334554443222 3467888887777766
No 16
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=64.71 E-value=7.9 Score=37.57 Aligned_cols=95 Identities=12% Similarity=0.217 Sum_probs=54.1
Q ss_pred cCcccccHHHHHhhcCC-CCcEEEEEEeCCCCCccCccCcCCceEEEEeeccchhhhhccccCccccCCccEEEEecccc
Q 015715 118 GIKQKDNVDAIVRKFLP-ENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDL 196 (402)
Q Consensus 118 G~kqk~~Vd~~v~kf~~-~nFdv~LFhYDg~vd~W~d~~ws~~aiHvsa~kqtKWw~akRFLHPdiv~~YDYIflwDDDL 196 (402)
..+-......+|+.... ..-.=+++.+.+...--....|.+..+-|....+++=-.-.||+..+.+. -|.||..|||+
T Consensus 8 ~~~R~~~L~~~l~~l~~~~~l~~IvVvWn~~~~~P~~~~~~~~~vpV~~~~~~~nsLnnRF~p~~~i~-T~AVl~~DDDv 86 (247)
T PF09258_consen 8 SYKRSDLLKRLLRHLASSPSLRKIVVVWNNPNPPPPSSKWPSTGVPVRVVRSSRNSLNNRFLPDPEIE-TDAVLSLDDDV 86 (247)
T ss_dssp -SS-HHHHHHHHHHHTTSTTEEEEEEEEE-TS--THHHHHT---S-EEEEEESSHHGGGGGS--TT---SSEEEEEETTE
T ss_pred cccchHHHHHHHHHHHcCCCCCeEEEEeCCCCCCCcccccCCCCceEEEEecCCccHHhcCcCccccC-cceEEEecCCc
Confidence 45545556666666543 34444555555421221124454555556666666666788998544444 49999999999
Q ss_pred ccCCCCHHHHHHHHHHh
Q 015715 197 GVENFDPRRYLEIVKSE 213 (402)
Q Consensus 197 ~vd~f~i~ryf~Ivr~~ 213 (402)
.++..+++.-|+.-+++
T Consensus 87 ~~~~~~l~faF~~W~~~ 103 (247)
T PF09258_consen 87 MLSCDELEFAFQVWREF 103 (247)
T ss_dssp EE-HHHHHHHHHHHCCS
T ss_pred ccCHHHHHHHHHHHHhC
Confidence 99999999989888744
No 17
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=64.25 E-value=3.8 Score=36.67 Aligned_cols=41 Identities=12% Similarity=-0.049 Sum_probs=35.4
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDP 224 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~ 224 (402)
+.+|||++.|+|..++...+.++++.+...+..+.++....
T Consensus 76 a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~ 116 (235)
T cd06434 76 VTTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRI 116 (235)
T ss_pred hCCCEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEe
Confidence 48999999999999999999999999887778888776544
No 18
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=63.57 E-value=6 Score=35.14 Aligned_cols=124 Identities=12% Similarity=-0.020 Sum_probs=69.1
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHH-hCCccccCCcCC--CCCceeeeeeeeec---CcccceeeeeccCCccccC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKS-EGFEISQPALDP--NSTEIHHKFTIRAR---TKKFHRRVYDLRGSVKCTN 257 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~-~gLeISQPALd~--~s~~i~h~iT~R~~---~~~vHr~~~~~~g~~~C~~ 257 (402)
+.+|||.+.|+|..++...+.++++.+.+ .++.+.++.... .... ..+..... ..-.+. +.. +..
T Consensus 83 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~--~~~---- 153 (234)
T cd06421 83 TTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPF--DWLADGAPNEQELFYGV-IQP--GRD---- 153 (234)
T ss_pred CCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcc--hhHHHHHHHHHHHHHHH-HHH--HHh----
Confidence 47999999999999999999999999987 667777664211 1110 00000000 000000 000 000
Q ss_pred CCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 258 ISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 258 ~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
..++ .++=.++=+|+|++++.+-.+ .. ...+-|+.+..-+.. .+.+|..++...+.|..
T Consensus 154 ---~~~~-~~~~g~~~~~r~~~~~~ig~~-~~---~~~~eD~~l~~r~~~-~g~~i~~~~~~~~~~~~ 212 (234)
T cd06421 154 ---RWGA-AFCCGSGAVVRREALDEIGGF-PT---DSVTEDLATSLRLHA-KGWRSVYVPEPLAAGLA 212 (234)
T ss_pred ---hcCC-ceecCceeeEeHHHHHHhCCC-Cc---cceeccHHHHHHHHH-cCceEEEecCccccccC
Confidence 0111 122223447899999987653 22 345778877743321 35688888877776663
No 19
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=61.29 E-value=3.8 Score=36.53 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=26.5
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCcccc
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQ 219 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQ 219 (402)
+..|||++.|.|...+...+.++++.+...+..+..
T Consensus 81 a~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~ 116 (211)
T cd04188 81 ARGDYILFADADLATPFEELEKLEEALKTSGYDIAI 116 (211)
T ss_pred hcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEE
Confidence 456999999999888877777777775555544433
No 20
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=61.14 E-value=6.8 Score=34.93 Aligned_cols=127 Identities=12% Similarity=-0.029 Sum_probs=67.1
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCC-C-CC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNI-S-EG 261 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~-~-~~ 261 (402)
+.+|||.+.|+|..++...++++++..++.+..+.++............ +........ +.......+... . ..
T Consensus 80 a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~ 154 (249)
T cd02525 80 SRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIGESKFQK-AIAVAQSSP----LGSGGSAYRGGAVKIGY 154 (249)
T ss_pred hCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCCCChHHH-HHHHHhhch----hccCCcccccccccccc
Confidence 4799999999999999888999998888877777665432211000000 000000000 000000000000 0 00
Q ss_pred CCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhh-hhhcCCCCCcEEEEeeeeEEecc
Q 015715 262 PPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLG-YCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 262 ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~-~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
..+.++ | +|+|++|+.+=. +... ...|-|+.+. +|.+ .+.++..+....+.|..
T Consensus 155 ~~~~~~---~--~~~~~~~~~~g~-~~~~--~~~~eD~~l~~r~~~--~G~~~~~~~~~~~~~~~ 209 (249)
T cd02525 155 VDTVHH---G--AYRREVFEKVGG-FDES--LVRNEDAELNYRLRK--AGYKIWLSPDIRVYYYP 209 (249)
T ss_pred cccccc---c--eEEHHHHHHhCC-CCcc--cCccchhHHHHHHHH--cCcEEEEcCCeEEEEcC
Confidence 001111 1 478999987642 3322 2346776665 3444 35689999988888874
No 21
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=56.20 E-value=6.3 Score=35.44 Aligned_cols=37 Identities=22% Similarity=0.192 Sum_probs=31.0
Q ss_pred CccEEEEeccccccCCCCHHHHHHHHHHhCCccccCC
Q 015715 185 NYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPA 221 (402)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPA 221 (402)
.||||++.|+|..++.-.+.++++.++..+..+.++.
T Consensus 84 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (236)
T cd06435 84 DAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAP 120 (236)
T ss_pred CCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecC
Confidence 4999999999999999889999888876677766653
No 22
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=54.99 E-value=14 Score=41.04 Aligned_cols=97 Identities=18% Similarity=0.263 Sum_probs=68.5
Q ss_pred ccCcccccHHHHHhhcCCCCcEEEEEEeCCC-------------------------C-CccCccCcCCceEEEEeeccch
Q 015715 117 AGIKQKDNVDAIVRKFLPENFTVILFHYDGD-------------------------V-NAWRGLDWSNKAIHIAAQNQTK 170 (402)
Q Consensus 117 VG~kqk~~Vd~~v~kf~~~nFdv~LFhYDg~-------------------------v-d~W~d~~ws~~aiHvsa~kqtK 170 (402)
+|...|..-.++=...+.++|+|+++-|.-. + +.-+|+.|-+-.+-|....-.+
T Consensus 631 ~gGsGkEF~~aLGGN~pREQFTvVmLTYERe~VLm~sLeRL~gLPYLnKvvVVWNspk~P~ddl~WPdigvPv~viR~~~ 710 (907)
T KOG2264|consen 631 AGGSGKEFSKALGGNRPREQFTVVMLTYEREAVLMGSLERLHGLPYLNKVVVVWNSPKDPPDDLTWPDIGVPVEVIRVAE 710 (907)
T ss_pred CCCchHHHHHHhcCCCccceEEEEEEEehHHHHHHHHHHHhhCCcccceEEEEeCCCCCChhcccCcCCCCceEEEEccc
Confidence 3445555444444466679999999999732 1 2345688877766666666666
Q ss_pred hhhhccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhC
Q 015715 171 WWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEG 214 (402)
Q Consensus 171 Ww~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~g 214 (402)
=-...|||..|.++- +.|.-.|||..+-|..|-==|.+=|++.
T Consensus 711 NsLNNRFlPwd~IET-EAvLS~DDDahLrhdEI~fgFRVWRE~R 753 (907)
T KOG2264|consen 711 NSLNNRFLPWDRIET-EAVLSLDDDAHLRHDEIIFGFRVWRENR 753 (907)
T ss_pred ccccccccCchhhhh-eeeeecccchhhhhhheeeeeehhhhcc
Confidence 668899999998876 9999999999998887755455555443
No 23
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=49.63 E-value=17 Score=36.43 Aligned_cols=189 Identities=16% Similarity=0.202 Sum_probs=94.1
Q ss_pred CCceEEEEeccCcccccHHHHHhhc----C-------CCCcEEEEEEeCCCCCc-cCcc-CcCC------ceEEEE--ee
Q 015715 108 SNRNLLAIPAGIKQKDNVDAIVRKF----L-------PENFTVILFHYDGDVNA-WRGL-DWSN------KAIHIA--AQ 166 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf----~-------~~nFdv~LFhYDg~vd~-W~d~-~ws~------~aiHvs--a~ 166 (402)
.+.--|++||=. ....+..+++.- . ..++.|++. =||+.|+ ...+ ++.+ ..+++. ..
T Consensus 69 ~~~isVVIP~yN-e~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVV-DDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~ 146 (333)
T PTZ00260 69 DVDLSIVIPAYN-EEDRLPKMLKETIKYLESRSRKDPKFKYEIIIV-NDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLR 146 (333)
T ss_pred CeEEEEEEeeCC-CHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEE-eCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCC
Confidence 445667777644 344455544421 1 125665555 5777664 2211 1111 124444 23
Q ss_pred ccchhhhhccccCccccCCccEEEEeccccccCCCCHHHHHHHHHH---hCCccccCCcCCC-CC-c-eeeeeeeeecCc
Q 015715 167 NQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKS---EGFEISQPALDPN-ST-E-IHHKFTIRARTK 240 (402)
Q Consensus 167 kqtKWw~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~---~gLeISQPALd~~-s~-~-i~h~iT~R~~~~ 240 (402)
++.|-.-.+.=+. .+..|||++.|.|...+..++.++++.++. .+.++..-+.... .+ . ...+...+--..
T Consensus 147 N~G~~~A~~~Gi~---~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~~~~~r~~~~~ 223 (333)
T PTZ00260 147 NKGKGGAVRIGML---ASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAKRKWYRNILMY 223 (333)
T ss_pred CCChHHHHHHHHH---HccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccccCcHHHHHHHH
Confidence 5555443333221 257899999999999999999999998875 4554443332210 00 0 011110000011
Q ss_pred ccceeeeeccCCccccCCCCCCCccceEEEecc--ccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEee
Q 015715 241 KFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAP--VFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDS 318 (402)
Q Consensus 241 ~vHr~~~~~~g~~~C~~~~~~ppcTgFVEIMAP--VFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa 318 (402)
.+|.- .. --|. +++-+.++. +|+|++++.+.+.+ ...+|+.|.-+-..+.- .+.+|.-|--
T Consensus 224 ~~~~l-~~----~~~~--------~~i~D~~~Gfk~~~r~~~~~i~~~~---~~~~~~fd~Ell~~a~~-~g~~I~EvPv 286 (333)
T PTZ00260 224 GFHFI-VN----TICG--------TNLKDTQCGFKLFTRETARIIFPSL---HLERWAFDIEIVMIAQK-LNLPIAEVPV 286 (333)
T ss_pred HHHHH-HH----HHcC--------CCcccCCCCeEEEeHHHHHHHhhhc---cccCccchHHHHHHHHH-cCCCEEEEce
Confidence 11110 00 0010 123333444 68999999876432 24688888777766652 3344544433
No 24
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=41.95 E-value=15 Score=33.25 Aligned_cols=127 Identities=15% Similarity=0.085 Sum_probs=65.7
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCC-CCCceeeeeee-eecCcccceeeeeccCCccccCCCCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDP-NSTEIHHKFTI-RARTKKFHRRVYDLRGSVKCTNISEG 261 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~-~s~~i~h~iT~-R~~~~~vHr~~~~~~g~~~C~~~~~~ 261 (402)
+.||||++.|.|..++...++++..+....+..+.|+-+.. +... ..++. +.-....|-.+ ...+. ..
T Consensus 86 a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~-------~~ 155 (232)
T cd06437 86 AKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRWGHINANY--SLLTRVQAMSLDYHFTI-EQVAR-------SS 155 (232)
T ss_pred CCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecceeeEcCCC--chhhHhhhhhHHhhhhH-hHhhH-------hh
Confidence 58999999999999998888887776655555555553321 0000 00100 00000000000 00000 00
Q ss_pred CCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 262 PPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 262 ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
..+...+=.++-+|+|++|..+-.+ .. ...+=|+.+...+. ..+.++..++...|.|..
T Consensus 156 ~~~~~~~~g~~~~~rr~~~~~vgg~-~~---~~~~ED~~l~~rl~-~~G~~~~~~~~~~v~~~~ 214 (232)
T cd06437 156 TGLFFNFNGTAGVWRKECIEDAGGW-NH---DTLTEDLDLSYRAQ-LKGWKFVYLDDVVVPAEL 214 (232)
T ss_pred cCCeEEeccchhhhhHHHHHHhCCC-CC---CcchhhHHHHHHHH-HCCCeEEEeccceeeeeC
Confidence 0111111112236999999887543 32 12457777665443 246789999888877774
No 25
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=40.75 E-value=17 Score=29.31 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=25.7
Q ss_pred CccEEEEeccccccCCCCHHHH-HHHHHHhCCccccCCc
Q 015715 185 NYDYIFLWDEDLGVENFDPRRY-LEIVKSEGFEISQPAL 222 (402)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ry-f~Ivr~~gLeISQPAL 222 (402)
.+|||++.|+|..++...+.++ ..+.+..+..+..+..
T Consensus 78 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 116 (180)
T cd06423 78 KGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRV 116 (180)
T ss_pred CCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeE
Confidence 7999999999998887767777 3333334444444433
No 26
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=40.70 E-value=23 Score=27.74 Aligned_cols=22 Identities=23% Similarity=0.098 Sum_probs=19.1
Q ss_pred CccEEEEeccccccCCCCHHHH
Q 015715 185 NYDYIFLWDEDLGVENFDPRRY 206 (402)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ry 206 (402)
.+||+++.|+|..++...+.++
T Consensus 77 ~~d~v~~~d~D~~~~~~~~~~~ 98 (156)
T cd00761 77 RGEYILFLDADDLLLPDWLERL 98 (156)
T ss_pred cCCEEEEECCCCccCccHHHHH
Confidence 6999999999999888777776
No 27
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=39.88 E-value=38 Score=32.66 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=51.8
Q ss_pred EEEeccCcccc-----cHHHHH---hhc-CCCCcEEEEEEeCCCCCccCc----cCcCCceE-EEEeeccchhhhhcccc
Q 015715 113 LAIPAGIKQKD-----NVDAIV---RKF-LPENFTVILFHYDGDVNAWRG----LDWSNKAI-HIAAQNQTKWWFAKRFL 178 (402)
Q Consensus 113 va~~VG~kqk~-----~Vd~~v---~kf-~~~nFdv~LFhYDg~vd~W~d----~~ws~~ai-Hvsa~kqtKWw~akRFL 178 (402)
|++||..++.. .+..++ +++ ...++.|++..++.. +++.+ +-=....+ .+....+...|..-+-.
T Consensus 2 iIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~eiIvvd~~s~-~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~a~ar 80 (281)
T PF10111_consen 2 IIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEIIVVDDGSS-DEFDEELKKLCEKNGFIRYIRHEDNGEPFSRAKAR 80 (281)
T ss_pred EEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCc-hhHHHHHHHHHhccCceEEEEcCCCCCCcCHHHHH
Confidence 68899888743 232223 332 246888888887765 33311 10011222 12111121122221111
Q ss_pred C-ccccCCccEEEEeccccccCCCCHHHHHH
Q 015715 179 H-PDVVSNYDYIFLWDEDLGVENFDPRRYLE 208 (402)
Q Consensus 179 H-Pdiv~~YDYIflwDDDL~vd~f~i~ryf~ 208 (402)
+ -=-.+.-|||+++|-|+.++...++++++
T Consensus 81 N~g~~~A~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 81 NIGAKYARGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HHHHHHcCCCEEEEEcCCeeeCHHHHHHHHH
Confidence 1 01136889999999999999888888888
No 28
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=39.34 E-value=24 Score=30.69 Aligned_cols=37 Identities=8% Similarity=0.136 Sum_probs=29.6
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHH-HHhCCccccC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIV-KSEGFEISQP 220 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Iv-r~~gLeISQP 220 (402)
+.+|||++.|+|..++...++++++.+ +..+..+..+
T Consensus 82 a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~ 119 (202)
T cd04184 82 ATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYS 119 (202)
T ss_pred hcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEc
Confidence 568999999999999888889999888 5555656544
No 29
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=39.00 E-value=22 Score=32.41 Aligned_cols=122 Identities=20% Similarity=0.140 Sum_probs=70.9
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHH--hCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKS--EGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEG 261 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~--~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~ 261 (402)
+.||||++.|+|+.++...+.++..-... .|+-=+-|-.-+..+....-... ...+|-.++. .
T Consensus 30 a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~~~~~~~~~l~~~---~~~~~~~~~~------------a 94 (175)
T PF13506_consen 30 AKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGVPARGFWSRLEAA---FFNFLPGVLQ------------A 94 (175)
T ss_pred CCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEecccccCCcCHHHHHHHH---HHhHHHHHHH------------H
Confidence 79999999999999998888877765554 33322233322222211110000 0012211111 0
Q ss_pred CCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715 262 PPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324 (402)
Q Consensus 262 ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~ 324 (402)
..-++|+=.|+=.|+|++++.+= -|. .+.+.-.=||.++..+.. .+.+|...... |+|+
T Consensus 95 ~~~~~~~~G~~m~~rr~~L~~~G-G~~-~l~~~ladD~~l~~~~~~-~G~~v~~~~~~-v~~~ 153 (175)
T PF13506_consen 95 LGGAPFAWGGSMAFRREALEEIG-GFE-ALADYLADDYALGRRLRA-RGYRVVLSPYP-VVQT 153 (175)
T ss_pred hcCCCceecceeeeEHHHHHHcc-cHH-HHhhhhhHHHHHHHHHHH-CCCeEEEcchh-eeec
Confidence 12346777888889999999752 222 345566789999987763 56777766543 4455
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=38.37 E-value=25 Score=30.91 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=28.4
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQP 220 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQP 220 (402)
+.+|||++.|+|..++.-.++++++.+.+.+-.+.+.
T Consensus 81 ~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~ 117 (229)
T cd04192 81 AKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAG 117 (229)
T ss_pred hcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEee
Confidence 5689999999999998888888888666555444333
No 31
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=34.97 E-value=30 Score=30.05 Aligned_cols=46 Identities=17% Similarity=0.105 Sum_probs=31.6
Q ss_pred ccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEec
Q 015715 274 VFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQ 324 (402)
Q Consensus 274 VFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~ 324 (402)
+|++++++.+-.+..+ ..|+-|+.+..++.. ..++.+++...+.|+
T Consensus 158 ~~r~~~~~~~~~~~~~---~~~~~D~~~~~~~~~--~~~~~~~~~~~~~~r 203 (214)
T cd04196 158 AFNRELLELALPFPDA---DVIMHDWWLALLASA--FGKVVFLDEPLILYR 203 (214)
T ss_pred eEEHHHHHhhcccccc---ccccchHHHHHHHHH--cCceEEcchhHHHHh
Confidence 6999999988754322 267778666655542 457889888877666
No 32
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=34.31 E-value=38 Score=31.06 Aligned_cols=38 Identities=8% Similarity=0.169 Sum_probs=29.4
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHh--CCccccCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE--GFEISQPA 221 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~--gLeISQPA 221 (402)
+.+|||++.|.|..++.-.+.+.++.+.+. ++-+.|+-
T Consensus 83 a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~ 122 (241)
T cd06427 83 ARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAP 122 (241)
T ss_pred cCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCc
Confidence 678999999999999988888888877643 33344543
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=34.19 E-value=23 Score=32.15 Aligned_cols=40 Identities=8% Similarity=-0.007 Sum_probs=31.2
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALD 223 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd 223 (402)
+..|||++.|+|..++...+.++++.++..+..+.++...
T Consensus 108 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~ 147 (251)
T cd06439 108 ATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELV 147 (251)
T ss_pred cCCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEE
Confidence 3469999999999999888888888886666666665543
No 34
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=34.09 E-value=30 Score=30.53 Aligned_cols=41 Identities=12% Similarity=0.121 Sum_probs=31.7
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDP 224 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~ 224 (402)
+.+|||++.|+|..++...+++++......+..++.+....
T Consensus 71 a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 111 (221)
T cd02522 71 ARGDWLLFLHADTRLPPDWDAAIIETLRADGAVAGAFRLRF 111 (221)
T ss_pred ccCCEEEEEcCCCCCChhHHHHHHHHhhcCCcEEEEEEeee
Confidence 45899999999999998888888777776666666555443
No 35
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]
Probab=33.76 E-value=71 Score=32.59 Aligned_cols=183 Identities=18% Similarity=0.219 Sum_probs=98.9
Q ss_pred CccccCCCccc----ccCCCCCCcCccCCCCCCceEEEEeccCcccc-cHHHHHhhcCCCCcEEEEEEeCCCCCccCccC
Q 015715 81 GIVQARSDLEL----RPLWSTSSSRKKFGVYSNRNLLAIPAGIKQKD-NVDAIVRKFLPENFTVILFHYDGDVNAWRGLD 155 (402)
Q Consensus 81 giv~~~sd~~l----r~Lwg~p~~~~~~~~~~~k~Lva~~VG~kqk~-~Vd~~v~kf~~~nFdv~LFhYDg~vd~W~d~~ 155 (402)
+|-....++.. |+=||+++. . ...+--+.+=+|..... .+++.|.+-....-||++-.|..+.. .+.
T Consensus 100 ~V~S~~~~farR~aiR~TW~~~~~-v----~~~~v~~~FLvG~~~~~~~~~~~l~~Ea~~ygDIi~~df~Dty~---nlt 171 (349)
T KOG2287|consen 100 LVKSAPDNFARRNAIRKTWGNENN-V----RGGRVRVLFLVGLPSNEDKLNKLLADEARLYGDIIQVDFEDTYF---NLT 171 (349)
T ss_pred EEecCCCCHHHHHHHHHHhcCccc-c----CCCcEEEEEEecCCCcHHHHHHHHHHHHHHhCCEEEEecccchh---chH
Confidence 44556666654 567998776 1 12222222333332222 45778877666778999888766422 221
Q ss_pred cCCceEEEEeeccchhhhhccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeee-ee
Q 015715 156 WSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHK-FT 234 (402)
Q Consensus 156 ws~~aiHvsa~kqtKWw~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~-iT 234 (402)
. +.+++ +.+.-.| ...++||.=.|||+-| +++.+++..++.. .|+=+.=.|.+... -.
T Consensus 172 l--Ktl~~---------l~w~~~~---cp~akfi~K~DDDvfv---~~~~L~~~L~~~~----~~~~~~~~G~v~~~~~p 230 (349)
T KOG2287|consen 172 L--KTLAI---------LLWGVSK---CPDAKFILKIDDDVFV---NPDNLLEYLDKLN----DPSSDLYYGRVIQNAPP 230 (349)
T ss_pred H--HHHHH---------HHHHHhc---CCcceEEEeccCceEE---cHHHHHHHHhccC----CCCcceEEEeecccCCC
Confidence 1 11111 1111111 1279999999999987 5566666666665 22221111222211 11
Q ss_pred eeecCcccceeeeeccCCcc--ccCCCCCCCcc---ceEEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCC
Q 015715 235 IRARTKKFHRRVYDLRGSVK--CTNISEGPPCT---GFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGD 308 (402)
Q Consensus 235 ~R~~~~~vHr~~~~~~g~~~--C~~~~~~ppcT---gFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~ 308 (402)
.|.+. +.| +. ..-||+ .|+=.|+-|+|+++-+.+...-. .+..-|-=|-.++-|++.+
T Consensus 231 ~R~~~------------~KwyVp~---~~y~~~~YP~Y~sG~gYvis~~~a~~l~~~s~-~~~~~~iEDV~~g~~l~~~ 293 (349)
T KOG2287|consen 231 IRDKT------------SKWYVPE---SEYPCSVYPPYASGPGYVISGDAARRLLKASK-HLKFFPIEDVFVGGCLAED 293 (349)
T ss_pred CCCCC------------CCCccCH---HHCCCCCCCCcCCCceeEecHHHHHHHHHHhc-CCCccchHHHHHHHHHHHh
Confidence 22222 111 11 112333 34558889999999999887443 4667776678888999853
No 36
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=31.91 E-value=45 Score=33.72 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=30.0
Q ss_pred CccEEEEeccccccCCCCHHHHHHHHHHhCCccc
Q 015715 185 NYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEIS 218 (402)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeIS 218 (402)
++|||++.|.|..++...++++++.+++.+..+.
T Consensus 133 ~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~v 166 (384)
T TIGR03469 133 PADYLLLTDADIAHGPDNLARLVARARAEGLDLV 166 (384)
T ss_pred CCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEE
Confidence 3899999999999999999999999988776654
No 37
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=30.12 E-value=35 Score=29.07 Aligned_cols=26 Identities=19% Similarity=0.120 Sum_probs=20.1
Q ss_pred CCccEEEEeccccccCCCCHHHHHHH
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEI 209 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~I 209 (402)
+.+|||+++|+|..++...+.+.++.
T Consensus 78 a~g~~i~~lD~D~~~~~~~l~~~~~~ 103 (182)
T cd06420 78 AKGDYLIFIDGDCIPHPDFIADHIEL 103 (182)
T ss_pred hcCCEEEEEcCCcccCHHHHHHHHHH
Confidence 57899999999998876556655554
No 38
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=28.60 E-value=29 Score=27.91 Aligned_cols=16 Identities=38% Similarity=0.866 Sum_probs=14.0
Q ss_pred ccccCCccEEEEeccc
Q 015715 180 PDVVSNYDYIFLWDED 195 (402)
Q Consensus 180 Pdiv~~YDYIflwDDD 195 (402)
..+...|||||++|.+
T Consensus 13 ~~i~~~~~~iFt~D~~ 28 (79)
T PF12996_consen 13 YSIANSYDYIFTFDRS 28 (79)
T ss_pred hhhCCCCCEEEEECHH
Confidence 4778999999999985
No 39
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=28.04 E-value=87 Score=32.52 Aligned_cols=75 Identities=12% Similarity=0.123 Sum_probs=63.4
Q ss_pred CCceEEEEeccCcccccHHHHHhhcCCCCcEEEE-EEeCCCCCccCccCcCCceEEEEeeccchhhhhccccCccc
Q 015715 108 SNRNLLAIPAGIKQKDNVDAIVRKFLPENFTVIL-FHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDV 182 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~~~nFdv~L-FhYDg~vd~W~d~~ws~~aiHvsa~kqtKWw~akRFLHPdi 182 (402)
.++.|++--+|.---+.++.++.++++.+|..++ +.|-+....-....||-+.-.+.+..-.-|...+-|+||+|
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~i 81 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEI 81 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCch
Confidence 3567899999999889999999999888887666 67777766667788998988898888888999999999865
No 40
>PHA03165 hypothetical protein; Provisional
Probab=27.81 E-value=44 Score=25.96 Aligned_cols=32 Identities=25% Similarity=0.491 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhhhcchhhhhhhhhhhccCCCccCCcccc
Q 015715 30 FMAIMCTVMLFVVYRTTYYQYKQTEMEAKFSPFDISKGSRF 70 (402)
Q Consensus 30 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (402)
...+++.+++|++|..+- ...+||++.-.++|
T Consensus 23 yilvvafvlaflvysdfl---------snlspfgeilsspc 54 (57)
T PHA03165 23 YILVVAFVLAFLVYSDFL---------SNLSPFGEILSSPC 54 (57)
T ss_pred ehhHHHHHHHHHHHHHHH---------hccCchhhhhcCcc
Confidence 356778889999999887 66778877655554
No 41
>PRK10073 putative glycosyl transferase; Provisional
Probab=25.00 E-value=66 Score=32.04 Aligned_cols=107 Identities=13% Similarity=0.166 Sum_probs=59.7
Q ss_pred CCceEEEEeccCcccccHHHHHhhcC---CCCcEEEEEEeCCCCCccCc-c-CcCC--ceEEEEe-eccchhhhhccccC
Q 015715 108 SNRNLLAIPAGIKQKDNVDAIVRKFL---PENFTVILFHYDGDVNAWRG-L-DWSN--KAIHIAA-QNQTKWWFAKRFLH 179 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~---~~nFdv~LFhYDg~vd~W~d-~-~ws~--~aiHvsa-~kqtKWw~akRFLH 179 (402)
.++.-|++||=... ..+...+.-.. ..+|.|++.. ||.+|+=.+ + +|.+ ..+++.. .++.. -.+...
T Consensus 5 ~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~~EIIiVd-DgStD~t~~i~~~~~~~~~~i~vi~~~n~G~-~~arN~-- 79 (328)
T PRK10073 5 TPKLSIIIPLYNAG-KDFRAFMESLIAQTWTALEIIIVN-DGSTDNSVEIAKHYAENYPHVRLLHQANAGV-SVARNT-- 79 (328)
T ss_pred CCeEEEEEeccCCH-HHHHHHHHHHHhCCCCCeEEEEEe-CCCCccHHHHHHHHHhhCCCEEEEECCCCCh-HHHHHH--
Confidence 35677888884443 34444333221 2578877776 777653111 1 1111 2233322 12221 011110
Q ss_pred ccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCcccc
Q 015715 180 PDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQ 219 (402)
Q Consensus 180 Pdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQ 219 (402)
-=-.+..|||++.|.|-.++...++++++.+++.++++..
T Consensus 80 gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~ 119 (328)
T PRK10073 80 GLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLDVAQ 119 (328)
T ss_pred HHHhCCCCEEEEECCCCccChhHHHHHHHHHHhCCCCEEE
Confidence 0013577999999999889888889999988888877754
No 42
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=24.98 E-value=76 Score=28.40 Aligned_cols=31 Identities=19% Similarity=0.067 Sum_probs=26.4
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEG 214 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~g 214 (402)
+.+|||++.|+|..++...+.+.+..+.+..
T Consensus 83 a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~ 113 (219)
T cd06913 83 SSGRYLCFLDSDDVMMPQRIRLQYEAALQHP 113 (219)
T ss_pred cCCCEEEEECCCccCChhHHHHHHHHHHhCC
Confidence 6789999999999999888888887776654
No 43
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=24.58 E-value=1.5e+02 Score=28.01 Aligned_cols=89 Identities=16% Similarity=0.084 Sum_probs=52.0
Q ss_pred CceEEEEeccCcccccHHHHHhhcCCCCcEEEEEEeCCCCCccCccCcCCceEEEEeeccchhhhhccccCccccCCccE
Q 015715 109 NRNLLAIPAGIKQKDNVDAIVRKFLPENFTVILFHYDGDVNAWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDY 188 (402)
Q Consensus 109 ~k~Lva~~VG~kqk~~Vd~~v~kf~~~nFdv~LFhYDg~vd~W~d~~ws~~aiHvsa~kqtKWw~akRFLHPdiv~~YDY 188 (402)
+-.+.+++-|++.. +.+++-+-....++.+-+..++- .++..+++... | -++. -..||+=|+++..||-
T Consensus 30 ~~~~~il~~~is~~-~~~~L~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~--~-----~~~~-~y~RL~i~~llp~~~k 98 (246)
T cd00505 30 PLRFHVLTNPLSDT-FKAALDNLRKLYNFNYELIPVDI--LDSVDSEHLKR--P-----IKIV-TLTKLHLPNLVPDYDK 98 (246)
T ss_pred CeEEEEEEccccHH-HHHHHHHHHhccCceEEEEeccc--cCcchhhhhcC--c-----cccc-eeHHHHHHHHhhccCe
Confidence 34577777776643 23333221222467777766642 34444433201 1 1222 2345545888888999
Q ss_pred EEEeccccccCCCCHHHHHHH
Q 015715 189 IFLWDEDLGVENFDPRRYLEI 209 (402)
Q Consensus 189 IflwDDDL~vd~f~i~ryf~I 209 (402)
|...|.|+.|- -+++.++++
T Consensus 99 vlYLD~D~iv~-~di~~L~~~ 118 (246)
T cd00505 99 ILYVDADILVL-TDIDELWDT 118 (246)
T ss_pred EEEEcCCeeec-cCHHHHhhc
Confidence 99999999886 688888865
No 44
>PF12621 DUF3779: Phosphate metabolism protein ; InterPro: IPR022257 This domain family is found in eukaryotes, and is approximately 100 amino acids in length. The family is found in association with PF02714 from PFAM. There are two completely conserved residues (W and D) that may be functionally important. This family is likely to be involved in phosphate metabolism however there is little accompanying literature to confirm this.
Probab=24.45 E-value=41 Score=28.37 Aligned_cols=43 Identities=26% Similarity=0.468 Sum_probs=34.7
Q ss_pred ccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCC
Q 015715 175 KRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPA 221 (402)
Q Consensus 175 kRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPA 221 (402)
..|+||.+.++--.|||+-|++||...- ++-.++.|+.||.-+
T Consensus 34 ~ay~~Pa~~~~~P~lWIP~D~~GvS~~e----i~~~~~~~v~~Sd~g 76 (95)
T PF12621_consen 34 HAYLHPAVSAPQPILWIPRDPLGVSRQE----IEETRKVGVPISDEG 76 (95)
T ss_pred hccCCHhHcCCCCeEEeecCCCCCCHHH----HHHhhcCCeEEECCC
Confidence 4588999999999999999999997644 455667777777655
No 45
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=24.43 E-value=3.4e+02 Score=26.62 Aligned_cols=90 Identities=20% Similarity=0.246 Sum_probs=61.0
Q ss_pred EEeccCcccccHHHHHhhcCCCCcE--EEEEEeCCCCCccCcc--------CcCCceEEEEeeccchhhhhccccCcccc
Q 015715 114 AIPAGIKQKDNVDAIVRKFLPENFT--VILFHYDGDVNAWRGL--------DWSNKAIHIAAQNQTKWWFAKRFLHPDVV 183 (402)
Q Consensus 114 a~~VG~kqk~~Vd~~v~kf~~~nFd--v~LFhYDg~vd~W~d~--------~ws~~aiHvsa~kqtKWw~akRFLHPdiv 183 (402)
+++-|.-....++.+..+| +|+ +.++-|.+..+++=|. .=.+-.|.+ -||||+.
T Consensus 2 vi~~G~yGeR~~~~i~~~~---~~~~~v~~~~~p~~l~efId~pee~Lp~i~~~Dl~I~y-------------~lHPDl~ 65 (217)
T PF02593_consen 2 VIYDGKYGERVIENIKNYF---DFCRSVIVYEIPEDLPEFIDDPEEYLPKIPEADLLIAY-------------GLHPDLT 65 (217)
T ss_pred eeeeCcchHHHHHHHHhcC---CCCceEEEEeCCccccccccChHHHccCCCCCCEEEEe-------------ccCchhH
Confidence 3444555555566666654 677 8888888765553221 111112111 2599985
Q ss_pred ---------CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCC
Q 015715 184 ---------SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPA 221 (402)
Q Consensus 184 ---------~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPA 221 (402)
+.+.+|.++-++-. .-..+.+-+..+++|+++.-|-
T Consensus 66 ~~l~~~~~e~g~kavIvp~~~~~--~g~~~~lk~~~e~~gi~~~~P~ 110 (217)
T PF02593_consen 66 YELPEIAKEAGVKAVIVPSESPK--PGLRRQLKKQLEEFGIEVEFPK 110 (217)
T ss_pred HHHHHHHHHcCCCEEEEecCCCc--cchHHHHHHHHHhcCceeecCc
Confidence 78999999998877 6677899999999999998884
No 46
>PF09828 Chrome_Resist: Chromate resistance exported protein; InterPro: IPR018634 Members of this family of bacterial proteins are involved in the reduction of chromate accumulation and are essential for chromate resistance [, ].
Probab=24.07 E-value=57 Score=29.90 Aligned_cols=48 Identities=25% Similarity=0.576 Sum_probs=34.6
Q ss_pred hhhhccccCccccCCccEEEEecccc-------ccCCCCH-----------HHHHHHHHHhCCccccCCcCC
Q 015715 171 WWFAKRFLHPDVVSNYDYIFLWDEDL-------GVENFDP-----------RRYLEIVKSEGFEISQPALDP 224 (402)
Q Consensus 171 Ww~akRFLHPdiv~~YDYIflwDDDL-------~vd~f~i-----------~ryf~Ivr~~gLeISQPALd~ 224 (402)
=|+++||+-|+ =+++|+.++.+ +-..||+ -.|=-++++||| ..|||..
T Consensus 15 ~WLIrRFIDp~----A~F~fv~~~~v~~~~~~~~A~pFD~~ga~~tH~g~~cTFe~ll~~f~L--~dpaL~~ 80 (135)
T PF09828_consen 15 PWLIRRFIDPE----AEFLFVPPPEVLDVACPFDAIPFDIPGAEFTHRGDRCTFEVLLASFGL--DDPALAR 80 (135)
T ss_pred HHHHHHhcCCC----ceEEEeCchhhccccccCCCCcccCCCCeeeeeCCcccHHHHHHHhCC--CCHHHHH
Confidence 49999999885 36888888761 2223443 236678899999 8999976
No 47
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=22.45 E-value=2e+02 Score=29.46 Aligned_cols=102 Identities=17% Similarity=0.281 Sum_probs=63.3
Q ss_pred eEEEEeccCcccccHHHHHh---hcCCCCcEEEEEEeCCC-------CCccCcc--CcCCceEEEEeeccc---hhhh--
Q 015715 111 NLLAIPAGIKQKDNVDAIVR---KFLPENFTVILFHYDGD-------VNAWRGL--DWSNKAIHIAAQNQT---KWWF-- 173 (402)
Q Consensus 111 ~Lva~~VG~kqk~~Vd~~v~---kf~~~nFdv~LFhYDg~-------vd~W~d~--~ws~~aiHvsa~kqt---KWw~-- 173 (402)
.|++++||..- ..+-.+++ .+....+.+.+|.-|.. .++|... .+....+|-.....+ .|-.
T Consensus 2 ~~~vv~~g~~~-~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~ 80 (304)
T cd06430 2 HLAVVACGERL-EETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLF 80 (304)
T ss_pred EEEEEEcCCcH-HHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhcc
Confidence 47889999983 33333333 23456899999985522 2223111 222234444433222 4533
Q ss_pred ----hccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhC
Q 015715 174 ----AKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEG 214 (402)
Q Consensus 174 ----akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~g 214 (402)
..|++=|+++.++|-|.-.|-|+.+ .-++..++++.+.++
T Consensus 81 ~~~~y~RL~ip~lLp~~dkvLYLD~Dii~-~~dI~eL~~~~~df~ 124 (304)
T cd06430 81 KPCAAQRLFLPSLLPDVDSLLYVDTDILF-LRPVEEIWSFLKKFN 124 (304)
T ss_pred cHHHHHHHHHHHHhhhhceEEEeccceee-cCCHHHHHHHHhhcC
Confidence 2467779999999999999999988 468999999866554
No 48
>PF11057 Cortexin: Cortexin of kidney; InterPro: IPR020066 Cortexin is a neuron-specific, 82-residue membrane protein which is found especially in vertebrate brain cortex tissue. It may mediate extracellular or intracellular signalling of cortical neurons during forebrain development. Cortexin is present at significant levels in the foetal brain, suggesting that it may be important to neurons of both the developing and adult cerebral cortex. Cortexin has a conserved single membrane-spanning region in the middle of each sequence []. In humans, there is selective expression of Cortexin 3 (CTXN3) in the kidney as well as the brain []. This entry contains Cortexins 1, 2 and 3.; GO: 0031224 intrinsic to membrane
Probab=22.28 E-value=84 Score=26.58 Aligned_cols=49 Identities=12% Similarity=0.105 Sum_probs=29.0
Q ss_pred CcchhhhHhhhhcCCCcccccceee---ehhhHHHHHHHHHHHHhhhcchhh
Q 015715 1 MKSIKTWRLLKRNSFSDGVKFGVKM---KQLQFMAIMCTVMLFVVYRTTYYQ 49 (402)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~~ 49 (402)
|.|+-.+-+.-..+-.....+++.. ..+-|+.++|+.+++++.|.+.+-
T Consensus 1 M~s~~~~~s~~~~s~~~~~~~~~~~eqkt~faFV~~L~~fL~~liVRCfrIl 52 (81)
T PF11057_consen 1 MSSTYCLPSPLPMSGNPLSASSLDLEQKTAFAFVGLLCLFLGLLIVRCFRIL 52 (81)
T ss_pred CCCcccCCCCcccCCCCCcccccccccceeehHHHHHHHHHHHHHHHHHHHH
Confidence 3444444333222223333444433 236788999999999999999854
No 49
>KOG1555 consensus 26S proteasome regulatory complex, subunit RPN11 [Posttranslational modification, protein turnover, chaperones]
Probab=22.03 E-value=40 Score=34.74 Aligned_cols=41 Identities=27% Similarity=0.392 Sum_probs=33.7
Q ss_pred ccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCccc
Q 015715 255 CTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGW 295 (402)
Q Consensus 255 C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGW 295 (402)
|.-+..+.-.|.|||-+-|||++.+..-+--..+..++-||
T Consensus 80 ~am~~sg~~is~~~e~~d~V~q~q~~~~l~~tGrp~~VVGW 120 (316)
T KOG1555|consen 80 FAMPQSGTGISKFVEAVDPVFQTQMMDLLKQTGRPELVVGW 120 (316)
T ss_pred eccccccceecccchhccHHHHHHHHHHHHhcCCcceEEee
Confidence 44445566778899999999999999988877777788898
No 50
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=21.84 E-value=91 Score=27.23 Aligned_cols=29 Identities=14% Similarity=0.099 Sum_probs=25.0
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHH
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKS 212 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~ 212 (402)
+.||||++.|.|..++...+.++.+.+..
T Consensus 80 ~~~d~v~~~DaD~~~~p~~l~~l~~~~~~ 108 (183)
T cd06438 80 DDPDAVVVFDADNLVDPNALEELNARFAA 108 (183)
T ss_pred CCCCEEEEEcCCCCCChhHHHHHHHHHhh
Confidence 46999999999999998888888877653
No 51
>KOG3708 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.18 E-value=47 Score=36.81 Aligned_cols=142 Identities=25% Similarity=0.317 Sum_probs=78.3
Q ss_pred EEEEEEeCCCCCc-cCccCcCCceEEEEeeccchhhhhccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCc
Q 015715 138 TVILFHYDGDVNA-WRGLDWSNKAIHIAAQNQTKWWFAKRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFE 216 (402)
Q Consensus 138 dv~LFhYDg~vd~-W~d~~ws~~aiHvsa~kqtKWw~akRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLe 216 (402)
-|.+|-|-..+++ ...+ .-.-|.-.+.|-..-..-++||--+.+.|||++|--||..|+.|-.-+++. .+.
T Consensus 52 rv~~F~~~~~i~~~~a~~---~~vs~~d~r~~~~~s~vl~~l~~~~~~~YDwFll~~D~tYv~a~~L~~l~~-----hms 123 (681)
T KOG3708|consen 52 RVHLFADSSRIDNDLAQL---TNVSPYDLRGQKTHSMVLGLLFNMVHNNYDWFLLAKDSTYVNAFVLLRLID-----HMS 123 (681)
T ss_pred eeEEeeccccccccHhhc---cccCccccCccccHHHHHHHHHHhhccccceEEEecCcceecHHHHHHHHh-----hcc
Confidence 4677777766553 3321 011111112222222334456555889999999999999998887776664 345
Q ss_pred cccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCCccceEEEeccccChhHHHHhhhhhc---cCCCc
Q 015715 217 ISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQ---NDLVH 293 (402)
Q Consensus 217 ISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miq---NDlvh 293 (402)
|-||-.-.. . .+ -|+++|.-. || =.+|+.+++.+.+-.. ||. .
T Consensus 124 in~dlymGE-------------------e-~~-~gs~rC~l~------~G------~LLS~s~l~~lrnnle~C~~~~-l 169 (681)
T KOG3708|consen 124 INEDLYMGE-------------------E-AE-DGSGRCRLD------TG------MLLSQSLLHALRNNLEGCRNDI-L 169 (681)
T ss_pred cccccccch-------------------h-hh-CccCccccc------cc------eeecHHHHHHHHhhHHHhhccc-c
Confidence 555532221 0 11 467778643 12 2477777776554322 322 2
Q ss_pred ccchhhhhhhhhcCCCCCcEEEEeeeeEEecccC
Q 015715 294 GWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQGIQ 327 (402)
Q Consensus 294 GWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~~p 327 (402)
.=-=|-++++|++. .+ +|| + .-.|+|++
T Consensus 170 sad~d~~lgrCi~~-At-~v~---C-~~~hQGvr 197 (681)
T KOG3708|consen 170 SADPDEWLGRCIQD-AT-GVG---C-KPLHQGVR 197 (681)
T ss_pred cCCcHHHHHHHHHH-hh-cCC---c-cchhhhHH
Confidence 22346888999984 22 455 2 23577664
No 52
>PLN02867 Probable galacturonosyltransferase
Probab=20.71 E-value=40 Score=36.98 Aligned_cols=34 Identities=24% Similarity=0.455 Sum_probs=29.4
Q ss_pred ccccCccccCCccEEEEeccccccCCCCHHHHHHH
Q 015715 175 KRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEI 209 (402)
Q Consensus 175 kRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~I 209 (402)
.||+=||++.++|-|...|+|+-|.. |+..++++
T Consensus 334 lRflIPeLLP~LdKVLYLD~DVVVqg-DLseLwdi 367 (535)
T PLN02867 334 LRIYIPELFPDLNKIVFLDDDVVVQH-DLSSLWEL 367 (535)
T ss_pred HHHHHHHHhhccCeEEEecCCEEEcC-chHHHHhC
Confidence 45556999999999999999999987 88888876
No 53
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=20.17 E-value=62 Score=28.37 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=65.0
Q ss_pred EEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCCCceeeeeeeeecCcccceeeeeccCCccccCCCCCCCccce
Q 015715 188 YIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTNISEGPPCTGF 267 (402)
Q Consensus 188 YIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~~~~~ppcTgF 267 (402)
||.+.|+|..++.....+..+.++.-+..+.|+...... . ...++.-+....... .+..+-.. ..+....+
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~~~~~~~vq~~~~~~~-~-~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~ 71 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALEDPKVDAVQGPIIFRN-R-GSLLTRLQDFEYAIS-HGLSRLSQ------SSLGRPLF 71 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHhCCCceEEEccEEecC-C-CChhheeehhhhhhh-hhhhHHHH------HhcCCCcc
Confidence 789999999999988999988888558888888876532 1 111222111110000 00000000 00111111
Q ss_pred EEEeccccChhHHHHhhhhhccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 268 VEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 268 VEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
+=.-+=+|++++++.+-. +. ..--.|=|+.+..-+. ..+.+++.++.. ++|+.
T Consensus 72 ~~G~~~~~r~~~l~~vg~-~~--~~~~~~ED~~l~~~l~-~~G~~~~~~~~~-~~~~~ 124 (193)
T PF13632_consen 72 LSGSGMLFRREALREVGG-FD--DPFSIGEDMDLGFRLR-RAGYRIVYVPDA-IVYTE 124 (193)
T ss_pred ccCcceeeeHHHHHHhCc-cc--ccccccchHHHHHHHH-HCCCEEEEeccc-ceeee
Confidence 112234688999997632 11 1123335666653222 135799999888 44553
No 54
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=20.01 E-value=1.5e+02 Score=27.79 Aligned_cols=25 Identities=20% Similarity=0.297 Sum_probs=18.0
Q ss_pred eeeehhhHHHHHHHHHHHHhhhcch
Q 015715 23 VKMKQLQFMAIMCTVMLFVVYRTTY 47 (402)
Q Consensus 23 ~~~~~~~~~~~~~~~~~f~~~~~~~ 47 (402)
++.-++-++++.++++++||.+++-
T Consensus 94 l~R~~~Vl~g~s~l~i~yfvir~~R 118 (163)
T PF06679_consen 94 LKRALYVLVGLSALAILYFVIRTFR 118 (163)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3444556678888888888888765
Done!