Query 015715
Match_columns 402
No_of_seqs 140 out of 162
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 17:25:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015715.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015715hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 89.4 0.68 2.3E-05 40.4 6.4 119 184-325 87-215 (255)
2 1xhb_A Polypeptide N-acetylgal 83.5 1.7 5.9E-05 42.4 6.4 39 184-222 113-151 (472)
3 3bcv_A Putative glycosyltransf 67.1 4.1 0.00014 35.0 3.5 109 108-221 4-120 (240)
4 2ffu_A Ppgalnact-2, polypeptid 65.8 5.8 0.0002 39.2 4.7 40 183-222 144-183 (501)
5 3f1y_A Mannosyl-3-phosphoglyce 61.6 9.4 0.00032 37.5 5.4 196 108-324 93-309 (387)
6 4fix_A UDP-galactofuranosyl tr 53.2 25 0.00085 37.1 7.1 37 185-221 268-305 (657)
7 2d7i_A Polypeptide N-acetylgal 45.5 42 0.0015 34.1 7.2 208 108-325 111-339 (570)
8 2z86_A Chondroitin synthase; G 42.6 8.5 0.00029 38.8 1.6 108 108-220 92-210 (625)
9 1omz_A Alpha-1,4-N-acetylhexos 38.4 41 0.0014 32.6 5.6 102 108-213 27-134 (293)
10 2c0n_A A197; thermophil protei 31.4 17 0.00058 33.9 1.5 39 173-218 44-85 (203)
11 3l7i_A Teichoic acid biosynthe 30.6 11 0.00036 39.5 0.0 36 183-218 81-116 (729)
12 2nxv_A ATP synthase subunits r 30.3 31 0.0011 30.8 3.1 29 184-212 73-101 (249)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=89.44 E-value=0.68 Score=40.43 Aligned_cols=119 Identities=8% Similarity=-0.053 Sum_probs=67.1
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHh-CCccccCCc-----CCCCCceeeeeeeeecCcccceeeeeccCCccccC
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPAL-----DPNSTEIHHKFTIRARTKKFHRRVYDLRGSVKCTN 257 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPAL-----d~~s~~i~h~iT~R~~~~~vHr~~~~~~g~~~C~~ 257 (402)
+..|||++.|+|..++...+.++++.++++ +..+..+.. +.+. ...+.. . .+...+. .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~----------~--- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENR-DIVKET-V-RPAAQVT----------W--- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-E-ECCCSCB----------S---
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCC-cchhhc-c-CchHHHH----------H---
Confidence 578999999999999998899999999876 666665543 2211 111110 0 0100000 0
Q ss_pred CCCCCCccceEEEeccccChhHHHHhh-hh---hccCCCcccchhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 258 ISEGPPCTGFVEGMAPVFSRSAWYCAW-HL---IQNDLVHGWGMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 258 ~~~~ppcTgFVEIMAPVFSR~Awrcvw-~m---iqNDlvhGWGLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
....++-..+=+|+|++++.+- .+ +..+.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus 151 -----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 -----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI 215 (255)
T ss_dssp -----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred -----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence 0011111234468999999875 32 111222334567665544432 23 69999988888773
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=83.52 E-value=1.7 Score=42.37 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=33.5
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCc
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPAL 222 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPAL 222 (402)
+..|||+|.|+|..++.--++++++.+++..-.+.-|.+
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~ 151 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII 151 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeee
Confidence 568999999999999999999999999987765655654
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=67.14 E-value=4.1 Score=34.96 Aligned_cols=109 Identities=16% Similarity=0.155 Sum_probs=59.8
Q ss_pred CCceEEEEeccCcccccHHHHHhhcC---CCCcEEEEEEeCCCCCccCc-c-CcC--CceEEEE-eeccchhhhhccccC
Q 015715 108 SNRNLLAIPAGIKQKDNVDAIVRKFL---PENFTVILFHYDGDVNAWRG-L-DWS--NKAIHIA-AQNQTKWWFAKRFLH 179 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~---~~nFdv~LFhYDg~vd~W~d-~-~ws--~~aiHvs-a~kqtKWw~akRFLH 179 (402)
.++.-|++++=.. ...+...|+-.. ..+|.|++.. ||..|+=.+ + ++. ..-+++. ..+..+=.-.+.=+
T Consensus 4 ~p~vsViIp~yn~-~~~l~~~l~Sl~~q~~~~~eiIvvD-d~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~a~N~g~- 80 (240)
T 3bcv_A 4 IPKVSVIVPIYNV-EKYLDQCVQALLAQTLSDIEIILID-DESPDNCPKICDDYAAQYPNIKVIHKKNAGLGMACNSGL- 80 (240)
T ss_dssp CCSEEEEEEESSC-TTTHHHHHHHHHTCSSSSEEEEEEE-CCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHHHHHHHH-
T ss_pred CCcEEEEEecCCC-HHHHHHHHHHHHhCcCCCeEEEEEE-CCCCcCHHHHHHHHHhhCCCEEEEECCCCChHHHHHHHH-
Confidence 3556677777433 344444444321 2467777765 666553111 0 000 0113332 22222111111111
Q ss_pred ccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCC
Q 015715 180 PDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPA 221 (402)
Q Consensus 180 Pdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPA 221 (402)
+ .+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 81 -~-~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 81 -D-VATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp -H-HCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred -H-HcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 1 256799999999999999999999999998777766544
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=65.76 E-value=5.8 Score=39.23 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=35.3
Q ss_pred cCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCc
Q 015715 183 VSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPAL 222 (402)
Q Consensus 183 v~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPAL 222 (402)
.+..|||+|.|+|..++...+.++++.+++..-.+..|.+
T Consensus 144 ~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~ 183 (501)
T 2ffu_A 144 AAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPII 183 (501)
T ss_dssp HCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred hcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeee
Confidence 3578999999999999999999999999988777777765
No 5
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=61.60 E-value=9.4 Score=37.53 Aligned_cols=196 Identities=12% Similarity=0.070 Sum_probs=97.4
Q ss_pred CCceEEEEeccCcccccHHHHHhhcC------CCCcEEEEEEeCCCCCccCcc--CcCCceEEEE------eeccchhhh
Q 015715 108 SNRNLLAIPAGIKQKDNVDAIVRKFL------PENFTVILFHYDGDVNAWRGL--DWSNKAIHIA------AQNQTKWWF 173 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~------~~nFdv~LFhYDg~vd~W~d~--~ws~~aiHvs------a~kqtKWw~ 173 (402)
.++..|++|+=.. ..++..+|.... ..+|.|++.. ||++|+=.++ +...+.++.. ..++.|-.-
T Consensus 93 ~p~vSVVIP~yNe-~~~l~~~l~sl~~~l~~~~~~~EIIVVD-DgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSRNV-ADTVGGIIDEIHALNERAPLIDQILVVD-ADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEESSC-TTTHHHHHHHHHHHHHHSCCCSEEEEEE-CSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcCCC-HHHHHHHHHHHHHHHhcCCCCeEEEEEc-CcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 5678889998554 444555444331 2478877766 7777643321 1111111110 013333222
Q ss_pred hccccCccccCCccEEEEeccccc-cCCCCHHHHHHHHHHh-CCccccCCcCCCCCceeeeeeeeecCcccce----eee
Q 015715 174 AKRFLHPDVVSNYDYIFLWDEDLG-VENFDPRRYLEIVKSE-GFEISQPALDPNSTEIHHKFTIRARTKKFHR----RVY 247 (402)
Q Consensus 174 akRFLHPdiv~~YDYIflwDDDL~-vd~f~i~ryf~Ivr~~-gLeISQPALd~~s~~i~h~iT~R~~~~~vHr----~~~ 247 (402)
.+.=+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+.......... ...... +.....+-+ .++
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~-~~~~~~-~~~~g~v~~~~~~~l~ 245 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFR-KGESIE-EDGGGRVTELTAKPLF 245 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC--------C-CBCCSHHHHHTHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccc-cccccc-cccCCchhhhhHHHHH
Confidence 22212 1357999999999999 8999999999988775 56665543321100 000000 000110000 000
Q ss_pred eccCCccccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCcccchhhhhh-hhhcCCCCCcEEEEeeeeEEec
Q 015715 248 DLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGWGMDMKLG-YCAQGDRTKNVGIIDSEYVVHQ 324 (402)
Q Consensus 248 ~~~g~~~C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGWGLDf~w~-~Ca~g~~~~kiGVVDa~~VvH~ 324 (402)
..--+.-+ . ..-+.+||. +|+|++++.+ ++ ..|||.|..+- .++.-...++|.=|+-.+..|.
T Consensus 246 ~~~~~~l~--~-~~d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~ 309 (387)
T 3f1y_A 246 NLFYPELA--G-FVQPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNR 309 (387)
T ss_dssp HHHCGGGT--T-CSCTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCC
T ss_pred HHHhHhhc--c-ccccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecC
Confidence 00000000 0 111233442 5899998876 32 37899886654 3322111235888888887775
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=53.17 E-value=25 Score=37.05 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=31.0
Q ss_pred CccEEEEeccccccCCCCHHHHHHHHHHh-CCccccCC
Q 015715 185 NYDYIFLWDEDLGVENFDPRRYLEIVKSE-GFEISQPA 221 (402)
Q Consensus 185 ~YDYIflwDDDL~vd~f~i~ryf~Ivr~~-gLeISQPA 221 (402)
.||||+|.|+|..++...+.++++.++.. ...+..|.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 68999999999999999999999999876 34455554
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=45.51 E-value=42 Score=34.09 Aligned_cols=208 Identities=13% Similarity=0.102 Sum_probs=97.7
Q ss_pred CCceEEEEeccCccccc----HHHHHhhcCCCC--cEEEEEEeCCCCCcc-Cc-cC-c--CCceEEEEee--ccchhhhh
Q 015715 108 SNRNLLAIPAGIKQKDN----VDAIVRKFLPEN--FTVILFHYDGDVNAW-RG-LD-W--SNKAIHIAAQ--NQTKWWFA 174 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~----Vd~~v~kf~~~n--Fdv~LFhYDg~vd~W-~d-~~-w--s~~aiHvsa~--kqtKWw~a 174 (402)
.++.-|++++=...... +++++..- ..+ |.|+|+. ||..|+- .+ ++ + ....|++... +..+ +
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVVD-DgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~---~ 185 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLVD-DFSDREHLKKPLEDYMALFPSVRILRTKKREGL---I 185 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEEE-CSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCH---H
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEEE-CCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCH---H
Confidence 46677888875554122 55555432 234 3666654 6665543 11 10 0 0012444322 2221 1
Q ss_pred ccccCccccCCccEEEEeccccccCCCCHHHHHHHHHHhCCccccCCcCCCC-Cceeeeee----eeec-Ccccc-eeee
Q 015715 175 KRFLHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEISQPALDPNS-TEIHHKFT----IRAR-TKKFH-RRVY 247 (402)
Q Consensus 175 kRFLHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeISQPALd~~s-~~i~h~iT----~R~~-~~~vH-r~~~ 247 (402)
.-...-=-.+..|||+|.|+|..++...++++++.+++..--+..|.++.-. ..+.+... .+.. ...++ +.+.
T Consensus 186 ~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (570)
T 2d7i_A 186 RTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIP 265 (570)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEEC
T ss_pred HHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccc
Confidence 1111000135679999999999999999999999998765445545432100 00111100 0000 00000 0000
Q ss_pred eccCCccccCCCCCCCccceEEEeccccChhHHHHhhhhhccCCCccc-chhhhhhhhhcCCCCCcEEEEeeeeEEecc
Q 015715 248 DLRGSVKCTNISEGPPCTGFVEGMAPVFSRSAWYCAWHLIQNDLVHGW-GMDMKLGYCAQGDRTKNVGIIDSEYVVHQG 325 (402)
Q Consensus 248 ~~~g~~~C~~~~~~ppcTgFVEIMAPVFSR~Awrcvw~miqNDlvhGW-GLDf~w~~Ca~g~~~~kiGVVDa~~VvH~~ 325 (402)
... ...-.+ ...+..+.++-.-+=+|+|++|..+=. |. +....| |=|+-+..-+.- .+.+|.++....|.|..
T Consensus 266 ~~~-~~~~~~-~~~~~~~~~~~g~~~~irr~~~~~iGg-fD-e~~~~~g~ED~dl~~Rl~~-~G~~i~~~p~~~v~H~~ 339 (570)
T 2d7i_A 266 IPP-ELQKAD-PSDPFESPVMAGGLFAVDRKWFWELGG-YD-PGLEIWGGEQYEISFKVWM-CGGRMEDIPCSRVGHIY 339 (570)
T ss_dssp CCT-TTCCSS-TTSCEECSSCCSSSEEEEHHHHHHTTS-SC-TTCCSSSSHHHHHHHHHHH-TTCEEEEEEEEEEEECC
T ss_pred cch-hhhccC-CCcceecccccceEEEEEHHHHHhcCC-CC-CcccccCcchHHHHHHHHh-CCCeEEEccCeEEEEEc
Confidence 000 000000 001111111112233588999998753 33 345566 445444422221 35689999999999974
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=42.62 E-value=8.5 Score=38.83 Aligned_cols=108 Identities=15% Similarity=0.231 Sum_probs=59.4
Q ss_pred CCceEEEEeccCcccccHHHHHhhcC----CCCcEEEEEEeCCCCCccCc-cC-cCC-ceEEEEeeccch--hhhh-ccc
Q 015715 108 SNRNLLAIPAGIKQKDNVDAIVRKFL----PENFTVILFHYDGDVNAWRG-LD-WSN-KAIHIAAQNQTK--WWFA-KRF 177 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~----~~nFdv~LFhYDg~vd~W~d-~~-ws~-~aiHvsa~kqtK--Ww~a-kRF 177 (402)
.++.-|++++=.. ...+...|.... ..++.|++.. ||..|+=.+ ++ +.+ ..+++....... .-.+ ..-
T Consensus 92 ~p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g 169 (625)
T 2z86_A 92 IDGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLG 169 (625)
T ss_dssp CCCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHH
T ss_pred CCcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHH
Confidence 4566677777443 344444444332 2378888776 665553221 11 111 123333332211 1111 111
Q ss_pred cCccccCCccEEEEeccccccCCCCHHHHHHHHHHhC-CccccC
Q 015715 178 LHPDVVSNYDYIFLWDEDLGVENFDPRRYLEIVKSEG-FEISQP 220 (402)
Q Consensus 178 LHPdiv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~g-LeISQP 220 (402)
+ -.+.+|||++.|+|..++...+.++++.+.+.. .-+.+|
T Consensus 170 ~---~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~ 210 (625)
T 2z86_A 170 L---RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGP 210 (625)
T ss_dssp H---HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECC
T ss_pred H---HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEe
Confidence 1 135789999999999999999999999998753 334444
No 9
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=38.39 E-value=41 Score=32.65 Aligned_cols=102 Identities=13% Similarity=0.135 Sum_probs=62.6
Q ss_pred CCceEEEEeccCcccccHHHHHhhcCC-CCcEEEEEEeCCC----CC-ccCccCcCCceEEEEeeccchhhhhccccCcc
Q 015715 108 SNRNLLAIPAGIKQKDNVDAIVRKFLP-ENFTVILFHYDGD----VN-AWRGLDWSNKAIHIAAQNQTKWWFAKRFLHPD 181 (402)
Q Consensus 108 ~~k~Lva~~VG~kqk~~Vd~~v~kf~~-~nFdv~LFhYDg~----vd-~W~d~~ws~~aiHvsa~kqtKWw~akRFLHPd 181 (402)
..++=|++-+-. ......++|+.... ..-+=+++.+.+. ++ .|..+ +..++.|....+.+=-.-.||+..+
T Consensus 27 ~~~FTvvi~ty~-R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~--~~~~vpv~v~~~~~nsLnnRF~p~~ 103 (293)
T 1omz_A 27 LDSFTLIMQTYN-RTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSL--GPHPIPVIFKPQTANKMRNRLQVFP 103 (293)
T ss_dssp TTCEEEEEEESS-CHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHT--CCCSSCEEEEECSSCCGGGGGSCCT
T ss_pred CCceEEEEEeec-ccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhcccc--CCCCccEEEEeCCCCchhhccCCCc
Confidence 345555554443 34556666765543 5566666777653 12 24333 1113344444454445678888533
Q ss_pred ccCCccEEEEeccccccCCCCHHHHHHHHHHh
Q 015715 182 VVSNYDYIFLWDEDLGVENFDPRRYLEIVKSE 213 (402)
Q Consensus 182 iv~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~ 213 (402)
.+ .-|.||..|||+.++..+++.=|++-+++
T Consensus 104 ~i-~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 104 EV-ETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp TC-CSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred cC-CcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 33 45999999999999999999988888754
No 10
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=31.38 E-value=17 Score=33.95 Aligned_cols=39 Identities=23% Similarity=0.492 Sum_probs=29.0
Q ss_pred hhccccCccccCCccEEEEeccc---cccCCCCHHHHHHHHHHhCCccc
Q 015715 173 FAKRFLHPDVVSNYDYIFLWDED---LGVENFDPRRYLEIVKSEGFEIS 218 (402)
Q Consensus 173 ~akRFLHPdiv~~YDYIflwDDD---L~vd~f~i~ryf~Ivr~~gLeIS 218 (402)
.+.+||- -..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 44 lv~~Fl~---~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 44 ALDMFLE---MKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp HHHHHHH---CTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred HHHHHHh---cCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 5566763 1369999999999 988888888887 4566554
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=30.55 E-value=11 Score=39.47 Aligned_cols=36 Identities=19% Similarity=0.237 Sum_probs=0.0
Q ss_pred cCCccEEEEeccccccCCCCHHHHHHHHHHhCCccc
Q 015715 183 VSNYDYIFLWDEDLGVENFDPRRYLEIVKSEGFEIS 218 (402)
Q Consensus 183 v~~YDYIflwDDDL~vd~f~i~ryf~Ivr~~gLeIS 218 (402)
.+..|||++.|+|-.++...++++++.++..++-++
T Consensus 81 ~A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~ 116 (729)
T 3l7i_A 81 EVETPYFMFLDADDELASYAITFYLEKFNNTDGLIA 116 (729)
T ss_dssp ------------------------------------
T ss_pred hccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEE
Confidence 357899999999999998888898888874444333
No 12
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=30.34 E-value=31 Score=30.80 Aligned_cols=29 Identities=10% Similarity=0.242 Sum_probs=26.6
Q ss_pred CCccEEEEeccccccCCCCHHHHHHHHHH
Q 015715 184 SNYDYIFLWDEDLGVENFDPRRYLEIVKS 212 (402)
Q Consensus 184 ~~YDYIflwDDDL~vd~f~i~ryf~Ivr~ 212 (402)
+..|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 56799999999999999999999999887
Done!