BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015718
(402 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 229/321 (71%), Gaps = 2/321 (0%)
Query: 82 DGYASKSEDDDHSNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPA 141
+ A + E D SNS F A YRF R + G +++ S S L V+ ++D++P
Sbjct: 75 NATAGQPEAFD-SNSKQKSFRDSLDAFYRFSRPHTVIGTVLSILSVSFLAVEKVSDISPL 133
Query: 142 YFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALM 201
FTG++EA+V A++M+IY+V +NQLSDVE+DKVNKPYLPLASGE S+ TGIAI + ++M
Sbjct: 134 LFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFSIM 193
Query: 202 SLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVY 261
S ++ S P WA+ +GTAYS+ LPLLRWK + +AA C++++ ++ Q Y
Sbjct: 194 SFWLGWIVGSWPLFWALFVSFMLGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFY 253
Query: 262 VHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
+HIQ +V GRP+ +FTRPL+FATAF+S F VVIA KD+ D++GDK FGI++ SV LG++
Sbjct: 254 LHIQTHVFGRPI-LFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQK 312
Query: 322 RVFRLSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGILASIFWLRVRAVDLSDNASIL 381
RVF V++L +AY A++VGA+SPF+ +K+I+++GH ILA+ W R ++VDLS I
Sbjct: 313 RVFWTCVTLLQMAYAVAILVGATSPFIWSKVISVVGHVILATTLWARAKSVDLSSKTEIT 372
Query: 382 SFYMFIWKLYYAEYLLIPFVR 402
S YMFIWKL+YAEYLL+PF++
Sbjct: 373 SCYMFIWKLFYAEYLLLPFLK 393
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 304 bits (778), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 221/332 (66%), Gaps = 4/332 (1%)
Query: 74 HRAPVTLQD--GYASKSEDDDH-SNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLL 130
HR + D G +S + H S+S A YRF R + G ++ S SLL
Sbjct: 74 HRPTSSSADASGQPLQSSAEAHDSSSIWKPISSSLDAFYRFSRPHTVIGTALSIVSVSLL 133
Query: 131 PVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGT 190
V+ L+D++P + TGL+EA+V A+ M+IY+V +NQL D+E+DKVNKP LPLASGE S T
Sbjct: 134 AVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLASGEYSPAT 193
Query: 191 GIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVS 250
G+A+ A A MS + S P A+ +GTAYS+ LP LRWK ++ +AA C+++
Sbjct: 194 GVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINLPFLRWKRSAVVAALCILA 253
Query: 251 LNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFG 310
+ ++ Q ++HIQ +V RP +FTRPL+FATAF++ F VVIA KD+ D++GD+ FG
Sbjct: 254 VRAVIVQLAFFLHIQTFVFRRP-AVFTRPLIFATAFMTFFSVVIALFKDIPDIEGDRIFG 312
Query: 311 IKTLSVMLGKERVFRLSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGILASIFWLRVR 370
IK+ SV LG+++VF + V +L +AY A+++GA+S L +K T++GH ILA+I W R R
Sbjct: 313 IKSFSVRLGQKKVFWICVGLLEMAYCVAILMGATSACLWSKYATVVGHAILAAILWNRSR 372
Query: 371 AVDLSDNASILSFYMFIWKLYYAEYLLIPFVR 402
++DL+ +I SFYMFIWKL+YAEYLLIP VR
Sbjct: 373 SIDLTSKTAITSFYMFIWKLFYAEYLLIPLVR 404
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 201/311 (64%), Gaps = 8/311 (2%)
Query: 92 DHSNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALV 151
D N L++F Y+F R YA +++ T SL+ V+ L+DL+ A+F G ++ +V
Sbjct: 108 DSVNDALDIF-------YKFCRPYAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVV 160
Query: 152 PAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRS 211
+ +HI+ V +NQL D+E+DK+NKP LPLASG++S + IT +S ++ L +A ++ S
Sbjct: 161 AVICIHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDS 220
Query: 212 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGR 271
P W V V +AY+V LPLLRWK L A ++ + ++H+Q V R
Sbjct: 221 WPLFWTVFISCMVASAYNVDLPLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKR 280
Query: 272 PLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSML 331
P F RPL+F TA +S + +VIA KD+ D++GD+KFGI++LS+ LG +RVF + VS+L
Sbjct: 281 P-TTFPRPLIFCTAIVSIYAIVIALFKDIPDMEGDEKFGIQSLSLRLGPKRVFWICVSLL 339
Query: 332 SIAYGAAVVVGASSPFLANKLITIIGHGILASIFWLRVRAVDLSDNASILSFYMFIWKLY 391
+ YG ++VGA+SP L +K+IT++GH +LAS+ W ++VDL+ N + SFYMFIWKL+
Sbjct: 340 EMTYGVTILVGATSPILWSKIITVLGHAVLASVLWYHAKSVDLTSNVVLHSFYMFIWKLH 399
Query: 392 YAEYLLIPFVR 402
AEY LIP R
Sbjct: 400 TAEYFLIPLFR 410
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 236 bits (602), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 184/296 (62%), Gaps = 1/296 (0%)
Query: 107 ALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQL 166
A Y F Y G+ + S+SLL V+ L+D++ ++ G+++ ++P + + IY+ +NQL
Sbjct: 115 AFYWFSYPYTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIEIYLCGVNQL 174
Query: 167 SDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGT 226
D+E+DK+NKP+LP+ASG+ S TG+ I+ A +S + + S P I ++ T
Sbjct: 175 YDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWITGSWPLICNLVVIASSWT 234
Query: 227 AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAF 286
AYS+ +PLLRWK F+AA CM+S L + H+Q VL RP+ F R L F AF
Sbjct: 235 AYSIDVPLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRPIG-FPRSLGFLVAF 293
Query: 287 ISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVVVGASSP 346
++ + + +A KD+ DV+GDK+ GI + +V LG++R F + VS +A+G ++ GAS
Sbjct: 294 MTFYSLGLALSKDIPDVEGDKEHGIDSFAVRLGQKRAFWICVSFFEMAFGVGILAGASCS 353
Query: 347 FLANKLITIIGHGILASIFWLRVRAVDLSDNASILSFYMFIWKLYYAEYLLIPFVR 402
K+ T +G+ +LASI W + ++VDLSD AS SFYMFIWKL YA + L+ +R
Sbjct: 354 HFWTKIFTGMGNAVLASILWYQAKSVDLSDKASTGSFYMFIWKLLYAGFFLMALIR 409
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 172/321 (53%), Gaps = 18/321 (5%)
Query: 88 SEDDDHSNSFLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGL- 146
+E DD L+ + +A +RF+R + G + +T+ L + L + T L
Sbjct: 77 AESDD---PVLDRIARFQNACWRFLRPHTIRGTALGSTA---LVTRALIENTHLIKWSLV 130
Query: 147 ---MEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSL 203
+ L+ + + Y+V INQ+ D+ +DKVNKPYLP+A+G++S+ + + + A+ L
Sbjct: 131 LKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIFFAIAGL 190
Query: 204 AYAVMIRSPPFIWAVIAW-IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYV 262
V PFI ++ + +F+GT YSV P LR K A + ++ G L F VY
Sbjct: 191 -LVVGFNFGPFITSLYSLGLFLGTIYSV--PPLRMKRFPVAAFLIIATVRGFLLNFGVY- 246
Query: 263 HIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 322
H + LG P + ++ P+ F T+F++ F +VIA KDL DV+GD+KF I TL+ LG
Sbjct: 247 HATRAALGLPFQ-WSAPVAFITSFVTLFALVIAITKDLPDVEGDRKFQISTLATKLGVRN 305
Query: 323 VFRLSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGILASIFWLRVRAVDLSD--NASI 380
+ L +L + Y +A+ + P + + I H ILAS + ++ ++ +I
Sbjct: 306 IAFLGSGLLLVNYVSAISLAFYMPQVFRGSLMIPAHVILASGLIFQTWVLEKANYTKEAI 365
Query: 381 LSFYMFIWKLYYAEYLLIPFV 401
+Y FIW L+YAEYLL PF+
Sbjct: 366 SGYYRFIWNLFYAEYLLFPFL 386
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 141/260 (54%), Gaps = 16/260 (6%)
Query: 149 ALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTG--IAITLASALMSLAYA 206
LV + + Y+V INQ+ D+ +DKVNKPYLP+A+G++S+ T + + A+A S+
Sbjct: 129 GLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTAWLLVVLFAAAGFSI--- 185
Query: 207 VMIRSPPFIWAVIAW-IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQ 265
V+ PFI ++ +F+GT YSV P R K A + ++ G L F VY +
Sbjct: 186 VVTNFGPFITSLYCLGLFLGTIYSV--PPFRLKRYPVAAFLIIATVRGFLLNFGVY-YAT 242
Query: 266 KYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFR 325
+ LG + ++ P+ F T F++ F +VIA KDL DV+GD+K+ I TL+ LG +
Sbjct: 243 RAALGLTFQ-WSSPVAFITCFVTLFALVIAITKDLPDVEGDRKYQISTLATKLGVRNIAF 301
Query: 326 LSVSMLSIAYGAAVVVGASSPFLANKLITIIGHGILAS--IF--WLRVRAVDLSDNASIL 381
L +L Y AA+ V P + + + H LA IF W+ +A D +I
Sbjct: 302 LGSGLLIANYVAAIAVAFLMPQAFRRTVMVPVHAALAVGIIFQTWVLEQAKYTKD--AIS 359
Query: 382 SFYMFIWKLYYAEYLLIPFV 401
+Y FIW L+YAEY+ P +
Sbjct: 360 QYYRFIWNLFYAEYIFFPLI 379
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 21/162 (12%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D E+D++N+P PL G + T + +L + LA A++I F +A++A+I
Sbjct: 56 INDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFALLAYI 115
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 282
+ Y+ +L L + GN +AA V+ P+Y I +G +
Sbjct: 116 TM-FLYAWKLKPLPFIGNIAVAALTGVT--------PLYGAIAVGKIG----------LA 156
Query: 283 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
T + F V +A +KD+ DV+GD K G KTL ++LG+ +
Sbjct: 157 GTLAVCAFLVNVAREIVKDIEDVEGDLKKGAKTLPIILGRRK 198
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 132 VQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSDVEVDKVNKPYLPLASGEISMGTG 191
+ T TP +F L+ +V + YV IN + D+EVDK+NKP PL SG I++
Sbjct: 28 IATTWKFTPLFFLPLL--VVSLIAAGGYV--INDVYDIEVDKINKPERPLPSGRIAVNIA 83
Query: 192 IAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSL 251
++ + L ++ + PF +A+I + + Y+ L L GN +V+L
Sbjct: 84 RRFSIVLFAVGLIISIPLGLIPFGFALITIVLL-YEYARSLKKLGLVGN------FIVAL 136
Query: 252 NGLLTQFPVYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGI 311
L+ + Y + G L F P T +I F + F+K + D++GDK+ G+
Sbjct: 137 TSALSAY--YGGLAS---GSLLGNFIIP----TIYIFFFTLSREFVKGIEDIEGDKRNGV 187
Query: 312 KTLSVMLGKERVFRLSVSMLSI 333
TL+V LG++ + ++ +L I
Sbjct: 188 NTLAVKLGEKSTWIIAKIILGI 209
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 29/166 (17%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASAL--MSLAYAVMIRSPPFIWAVIA 220
IN D E+DK+N+P PL G +MG +A+ + L + LA A MI FI VIA
Sbjct: 56 INDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMINIYAFILGVIA 113
Query: 221 WI--FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTR 278
++ F+ Y+ +L L + GN +A GL P+Y + LG
Sbjct: 114 YVTMFI---YAWKLKPLPFVGNIVVA--------GLTGATPLYGAVAVEHLG-------- 154
Query: 279 PLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
+ I F V +A IKD+ DV+GD G KTL ++ GK+R
Sbjct: 155 --LAGYLAICAFLVNVAREVIKDIEDVEGDMAKGAKTLPIIWGKKR 198
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 20/172 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D E+D +NKPY P+ SG IS + I +A +L +A ++ + FI +I
Sbjct: 54 AINDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFL---GFIEFLIVT 110
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
F + Y+ RW + + +VSL T ++ + L + IF+
Sbjct: 111 AFSLSWYAYA----RWLKRTGVPGNALVSLGVAFTL--IFGSLAAGNLTNKVIIFS---- 160
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER----VFRLSVS 329
+ AF S + F+K + D+ GD+ G++T++V +G +R VF LS++
Sbjct: 161 -SVAFTSNL--IREFVKAVEDLPGDRAHGVRTIAVRIGVKRTGILVFLLSLA 209
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A N D VD +N+P+ P+ SG I G+ I +A +L+SL W + +W
Sbjct: 70 AANDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVG---------WQLGSW 120
Query: 222 IFVGT--------AYSVQLPLLR---WKGNSFLAAFCMVSLNGL--LTQFPVYVHIQKYV 268
FV T AYSV+ L+ W G + ++ GL +T V +
Sbjct: 121 GFVATLLGVAAAWAYSVEPIRLKRSGWWGPGLVG----LAYEGLPWITGAAVLLATADTS 176
Query: 269 LGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSV 328
G P+ +M AT + + I I D ++GD+K GIK+L + G E +++
Sbjct: 177 PGFPI------VMMATLY-ALGAHGIMTINDFKAIEGDRKLGIKSLPAVYGPEVAAKIAC 229
Query: 329 SMLSIAYGAAVVVGA----SSPFLANKLITIIGHGILASIFWLR 368
+++ +A A+V+ S P+ A ++ ++ A W+R
Sbjct: 230 TVMGLA--QALVITMLYLFSKPYHATAVLVLLCGQFWAMSVWMR 271
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN + D+E+DK+NKP PL SG I + ++++ L+ + +V++ FI A++ +
Sbjct: 56 INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALLT-V 114
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVS-LNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
Y+ L GN +A +S G L F +V+ R L+
Sbjct: 115 LALYYYAKDLKKQGLVGNLIVALTSALSAFYGGLAFFE-----GSWVI--------RTLI 161
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSI 333
T +I F + F+K + DV GD G+KTL+V +G E+ + +S +L I
Sbjct: 162 -PTLYIFFFTLTREFVKGIEDVKGDMTNGVKTLAVRVGIEKTWFISKIILVI 212
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A N D VD VN+P P+ SG I G+ I L ++SLA M+ P A +
Sbjct: 69 AANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWML-GPWGFGATVFG 127
Query: 222 IFVGTAYSVQLPLLR---WKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRP-LEIFT 277
+ AYSV+ L+ W G L A C L P + G P I T
Sbjct: 128 VLAAWAYSVEPIRLKRSGWWGPG-LVALCYEGL-------PWFTGAAVLSAGAPSFFIVT 179
Query: 278 RPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 334
L++A I + D ++GD++ G+++L VMLG E +L+ +++++A
Sbjct: 180 VALLYAFGAHG-----IMTLNDFKALEGDRQHGVRSLPVMLGPEVAAKLACTVMAMA 231
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN DVE+DK+N+P P+ G I+ + + L A+++ F++A+ A+
Sbjct: 56 INDYFDVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAY- 114
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVY--VHIQKYVLGRPLEIFTRPL 280
F+ Y+ +L L + GN V++ L P+Y V + + L L I
Sbjct: 115 FLTFVYAWKLKPLPFIGN--------VTVALLTAATPIYGAVGVGRIDLAGYLAI----- 161
Query: 281 MFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
F V ++ +KD+ D +GDK+ G +TL +M+GK++
Sbjct: 162 -------CAFLVNVSREIMKDIEDFEGDKRLGARTLPIMIGKKK 198
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN + DVE+DK+NKPY P+ SG+IS+ A+++A ++ +A ++++ + A++ I
Sbjct: 56 INDVYDVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALVTAI 115
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSL-NGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
+ Y+ L + GN +A +S+ G L F ++L ++
Sbjct: 116 GL-IYYAKDLKKTGFYGNLLVATTTALSIFYGGLAFFS-----DNWLL---------RII 160
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLS 327
T + ++ +K + D +GD +KTL+ LG + +R++
Sbjct: 161 IPTLYAFFLTLIREIVKGIEDYNGDSLNNVKTLATTLGINKSWRIA 206
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D E+DK+N+P PL G +S + ++A + A I F+ A++A++
Sbjct: 56 INDYFDYEIDKINRPERPLPRGAMSRKAALWYSVALFATGIVLAWFINIWDFLLAIVAYV 115
Query: 223 --FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
F+ Y+ +L + + GN +A SL G P+Y I +G
Sbjct: 116 TMFI---YAWKLKPMPFIGNVVVA-----SLTG---ATPLYGAIAVGEIG---------- 154
Query: 281 MFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
+ T + F V +A IKD+ D++GD G KTL +++G++R
Sbjct: 155 LAGTLALCAFLVNVAREVIKDIEDIEGDMAKGAKTLPILIGRKR 198
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN DVE+D+VN+P P+ G I + L ++ LA A + ++A+ A+
Sbjct: 56 INDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYA 115
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 282
Y+ +L L + GN V++ L P+Y + +G +
Sbjct: 116 LT-FIYAWKLKPLPFIGN--------VAVALLTAATPIYGALGVGRVG----------LA 156
Query: 283 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVV 340
I F V ++ +KD+ D++GD K G KTL +++GK R +M+S +G V
Sbjct: 157 GYLAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRR-----AAMISSIFGVLTV 211
Query: 341 VGASSP 346
+ + P
Sbjct: 212 ITSFLP 217
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 25/163 (15%)
Query: 164 NQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMS--LAYAVMIRSPPFIWAVIAW 221
N D E+DK+N+P PL G +S + L + LAY + IR+ F++A IA+
Sbjct: 57 NDYFDYEIDKINRPNRPLPRGAMSRRAALYYALLQYAIGSILAYFLNIRA--FVFATIAY 114
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
F+ Y +L L GN +AA + P+Y I +G +
Sbjct: 115 -FLTFLYGWKLKPLPLVGNITVAALTAAT--------PIYGAIGVGRIG----------L 155
Query: 282 FATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
I F V ++ +KD+ D++GDK G +TL +++G+++
Sbjct: 156 AGYLAICAFLVNVSREIMKDIEDIEGDKALGARTLPIIIGEKK 198
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 110/272 (40%), Gaps = 75/272 (27%)
Query: 110 RFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMHIYVVAINQLSD- 168
MRA CA A L+ L+ +P L + + ++ + A N L+D
Sbjct: 6 ELMRAGNCAMAAFAGLIGVLIAYNILSSASPYVSLSLFDTSLIFAIVFLVTGAGNGLNDY 65
Query: 169 --VEVDKVNKPYLPLASGEISMG-----------TGIA-----------ITLASALMSLA 204
+E+DKVNKP P+ SG+IS+ TGI I L ++++ +
Sbjct: 66 FDIEIDKVNKPSRPIPSGKISLKSALYFSLFLFITGITLAFLVNPLCGIIALFNSMVLIL 125
Query: 205 YAVMIRSPPFIW-AVIAWIFVGTAYSVQLPLLRWKGNSFL---AAFCMVSLNGLLTQFPV 260
YA ++ PF A + ++ G++FL A F M L L+ F
Sbjct: 126 YAQSLKRTPFFGNASVGYL---------------TGSTFLFGGAVFGMAGLQALVVLF-- 168
Query: 261 YVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGK 320
L L R + +KD+ D+ GDKK G +TL +++G
Sbjct: 169 --------LLATLATIAREI----------------VKDVEDIVGDKKDGARTLPILIGA 204
Query: 321 ERVFRLSVSMLSIAYGAAVVVGASSPFLANKL 352
++ S ++ A+G ++ + P+L + L
Sbjct: 205 KK-----ASYIAAAFGFTAMLASPVPYLQSIL 231
>sp|Q18J00|DGGGP_HALWD Digeranylgeranylglyceryl phosphate synthase OS=Haloquadratum
walsbyi (strain DSM 16790) GN=HQ_1884A PE=3 SV=1
Length = 286
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 43/193 (22%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D +DK+N+P P+ G IS I S + +A V P I V+A
Sbjct: 61 AINDYFDRAIDKINRPMRPIPRGAISERGAIVF---SGFLFVAAVVSTSVLPLIAIVLAL 117
Query: 222 --IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRP 279
+ AY+ L GN+ +A Y+ ++ G
Sbjct: 118 MNLLALVAYTELFKGLPGVGNAIVA----------------YLTGSTFLFGAA------- 154
Query: 280 LMFATAFISCFCVVIAFI------------KDLHDVDGDKKFGIKTLSVMLGKERVFRLS 327
A I+ F VV+ FI KD+ D+DGD+K G++TL +++G +R++
Sbjct: 155 ---AIGRITDFGVVVLFILAALATATREIIKDIEDLDGDRKEGLQTLPIVIGVTPAYRVA 211
Query: 328 VSMLSIAYGAAVV 340
+L +A A++V
Sbjct: 212 TGVLLVAVIASIV 224
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D E+DK+N+P PL G +S + ++ +++ A +I FI+A+ A++
Sbjct: 56 INDYFDYEIDKINRPNRPLPRGALSKNIALVYGISLGGVAILIAYLINFEAFIFALGAYL 115
Query: 223 FVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLMF 282
+ Y+ +L K F+ + +L G+ P+Y I +G +
Sbjct: 116 LM-YLYARKL-----KPQPFIGNLVVATLTGIT---PIYGAIAVGKIG----------LA 156
Query: 283 ATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVV 340
+ F V +A KD+ D++GDK G KTL ++ G E S S + + + A +
Sbjct: 157 GYLALCAFLVNVAREIFKDIEDIEGDKAQGAKTLPIVWGIE-----SSSKIGVIFSVATI 211
Query: 341 VGASSPFLAN 350
+ + P A
Sbjct: 212 IASLLPVKAG 221
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
IN D E+D++N P P+ SG+I + + +L L+S+ +I I ++
Sbjct: 50 TINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFIISLENGIVVILCT 109
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
I + Y+ L K F+ C+ L GL F + + LG L F +
Sbjct: 110 ILM-IIYAYDL-----KQRCFIGNLCVAILTGLTFVFGGLIT-KDVNLGFILGFFAFLMT 162
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSV 328
+ IKD+ D++GDKK TL ++ G ++ L+V
Sbjct: 163 LSR----------EIIKDIEDIEGDKKEDAHTLPIIYGTKKAVMLAV 199
>sp|Q5W6H5|CHLG_ORYSJ Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica
GN=CHLG PE=2 SV=1
Length = 376
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 159 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 217
Y IN D ++D +N+PY P+ SG IS I A L L ++ +WA
Sbjct: 139 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLD----VWAG 194
Query: 218 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
+I ++ VG +Y P L+ K N ++ F + + Y+ + +
Sbjct: 195 HDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGA---------SYIGLPWWAGQ 245
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSM 330
T ++ T+ S + IA + D V+GD+ G+++L V G E + V
Sbjct: 246 ALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGA 305
Query: 331 LSI 333
+ I
Sbjct: 306 IDI 308
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A+N + D+E+DK+NKP PL S +IS+ + T+ S L+ ++ ++I I IA
Sbjct: 58 ALNDIQDIEIDKINKPNRPLPSNKISLKSA---TIFSYLLMIS-GIIISLFNMICFAIAL 113
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
I + + L ++K N + + L G +++ V + + ++
Sbjct: 114 I---NSIVLYLYAKKYKRNKIIGNLIVAYLTG-----SIFIFGGASVGNVEITL----IL 161
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 324
F A + + I IKD D+DGDK G+ +L + GK +F
Sbjct: 162 FLCALFATWSREI--IKDYEDLDGDKSEGVISLPIKYGKNSIF 202
>sp|Q9M3W5|CHLG_AVESA Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1
SV=1
Length = 378
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 21/183 (11%)
Query: 159 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 217
Y IN D ++D +N+PY P+ SG IS I L L ++ IWA
Sbjct: 141 YTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLD----IWAG 196
Query: 218 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
+I ++ +G +Y P L+ K N ++ F + + Y+ + +
Sbjct: 197 HDFPIIFYLALGGSLLSYIYSAPPLKLKQNGWIGNFALGA---------SYIGLPWWAGQ 247
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSM 330
T ++ T S + IA + D ++GD+ G+++L V G E + V
Sbjct: 248 ALFGTLTPDIVVLTCLYSIAGLGIAIVNDFKSIEGDRTLGLQSLPVAFGMETAKWICVGA 307
Query: 331 LSI 333
+ I
Sbjct: 308 IDI 310
>sp|Q38833|CHLG_ARATH Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG
PE=2 SV=1
Length = 387
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 159 YVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA- 217
Y IN D ++D +N+PY P+ SG IS I L L A ++ +WA
Sbjct: 150 YTQTINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILD----VWAG 205
Query: 218 ----VIAWIFVGT---AYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
+ ++ +G +Y P L+ K N ++ F + + Y+ + +
Sbjct: 206 HTTPTVFYLALGGSLLSYIYSAPPLKLKQNGWVGNFALGA---------SYISLPWWAGQ 256
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER-----VFR 325
T ++ T S + IA + D V+GD+ G+++L V G E V
Sbjct: 257 ALFGTLTPDVVVLTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWICVGA 316
Query: 326 LSVSMLSIAYGAAVVVGASSPFLANKLITII 356
+ ++ LS+ A ++ + P+ A L+ +I
Sbjct: 317 IDITQLSV---AGYLLASGKPYYALALVALI 344
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 19/167 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D EVD VN+P P+ SG +S + L + + A +I
Sbjct: 51 AINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINR--------MC 102
Query: 222 IFVGTAYSVQLPLLRWK-GNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
+ + SV L L W+ + L MVS Y+ ++ G + P
Sbjct: 103 LAIAALNSVLLYLYSWRLKGTPLIGNVMVS----------YLVGSCFLFGAAVGQRPAPA 152
Query: 281 MFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLS 327
++ +V +KDL DV+GD G+KTL + G+ R++
Sbjct: 153 VWLFLLAFLANLVREILKDLEDVEGDAALGLKTLPIAYGEGVALRVA 199
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 43/174 (24%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGT-----------GIAITLASALMSLAYAVMIRS 211
IN + DVE+D++N+P P+ +G+IS+ GIAI + + LA A++
Sbjct: 54 INDVRDVEIDRINRPDRPIPAGDISLAGARAYAAALFVGGIAIATLTTTLCLAIAIINSV 113
Query: 212 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQF-PVYVHIQKYVLG 270
++AV R K L + L G + F + I+ V
Sbjct: 114 ILIVYAV-----------------RLKRTPVLGNVAVAYLAGSVFLFGGAFAGIEGLVRN 156
Query: 271 RPLEIFTRPLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKER 322
L T F IA +KD DVDGD G +TL +++G +
Sbjct: 157 LSLAAIT------------FLATIARELLKDAEDVDGDAAGGARTLPMIVGVRK 198
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D ++D +N+P P+ G +S A+ + AL ++A + + P A+ A
Sbjct: 55 AINDYFDRDIDAINEPDRPIPRGAVSPRG--ALVYSVALFAVAVVLTLLLPWLAIAIAAI 112
Query: 222 IFVG-TAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
V AY+ L GN+ +A L G +++ V G ++ +
Sbjct: 113 NLVALVAYTEVFKGLPGVGNALVA-----YLTG-----STFLYGGAAVGG---DLAAVVV 159
Query: 281 MFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 322
+FA A +C + +KD+ D+DGD+ G++TL +++G+ R
Sbjct: 160 LFALA--ACATMAREIVKDVEDIDGDRAEGLRTLPIVIGERR 199
>sp|Q9HRP0|DGGGP_HALSA Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=VNG_0610G PE=3 SV=2
Length = 276
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 67/188 (35%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D EVD++N P + G +S +LAY+V++
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVS-----------PRGALAYSVVL------------ 92
Query: 222 IFVGTA-YSVQLPLLRWKGNSFLAAFCMVSLN--GLLTQFPVYVHIQKYVLGRPLE---- 274
FVG A + LP+L A C+ +LN GLLT +Y+ GRP
Sbjct: 93 -FVGAAALAATLPVL---------AVCIAALNLAGLLTY-------TQYLKGRPGAGNAL 135
Query: 275 ---IFTRPLMFATAFI---------------SCFCVVIAFIKDLHDVDGDKKFGIKTLSV 316
+ +F A + S F + IKD+ D+ GD+ G++TL V
Sbjct: 136 VAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREV--IKDVEDLAGDRAAGLRTLPV 193
Query: 317 MLGKERVF 324
++G +R
Sbjct: 194 VVGHQRAL 201
>sp|B0R3S1|DGGGP_HALS3 Digeranylgeranylglyceryl phosphate synthase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE_1921R
PE=3 SV=1
Length = 276
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 67/188 (35%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D EVD++N P + G +S +LAY+V++
Sbjct: 56 AINDYFDREVDRINDPDRAIPRGAVS-----------PRGALAYSVVL------------ 92
Query: 222 IFVGTA-YSVQLPLLRWKGNSFLAAFCMVSLN--GLLTQFPVYVHIQKYVLGRPLE---- 274
FVG A + LP+L A C+ +LN GLLT +Y+ GRP
Sbjct: 93 -FVGAAALAATLPVL---------AVCIAALNLAGLLTY-------TQYLKGRPGAGNAL 135
Query: 275 ---IFTRPLMFATAFI---------------SCFCVVIAFIKDLHDVDGDKKFGIKTLSV 316
+ +F A + S F + IKD+ D+ GD+ G++TL V
Sbjct: 136 VAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREV--IKDVEDLAGDRAAGLRTLPV 193
Query: 317 MLGKERVF 324
++G +R
Sbjct: 194 VVGHQRAL 201
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAV-IAW 221
+N D+E+DKVN+P P+ SG++S A+ A L + A + IW + IA
Sbjct: 54 LNDYFDLEIDKVNRPDRPIPSGKVSPKG--AVVWAGILFAAGVAAACFTN--IWCLAIAL 109
Query: 222 IFVGTAYSVQLPLL---RWKGNSFLAAFCMVSLNGLLTQFPVY-VHIQKYVLGRPLEIFT 277
+ +V L ++ ++KG FL + L+G + F + V + +++ PL
Sbjct: 110 V------NVVLLIIYAAKFKGIPFLGNLSVAYLSGSIFLFGGFLVGPESFLVMLPL---- 159
Query: 278 RPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGA 337
FA F +KD D++GD+ G +TL + +G + S+L++ +
Sbjct: 160 ----FAITFFGTLAR--ELLKDAEDIEGDRLGGARTLPMQIGVRK-----TSVLAVIFVL 208
Query: 338 AVVVGASSPFLANKLITIIGHGIL-ASIFWLRVRAVDLSDNASI 380
V+ + PFL ++ ++ G++ A I + +RA+ + +
Sbjct: 209 FAVLCSFVPFLTWGVVYLVLIGVVDAFILLVTLRALKFETSTEL 252
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 27/178 (15%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
AIN D E+D VN+P P+ SG IS + ++A + A +I A++
Sbjct: 52 AINDYFDREIDAVNRPDRPIPSGRISPRAALIWSVALFIAGCLIAGLINQSCLALALLNS 111
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVS-LNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
FV Y+ +L L GN ++ + L G L P +
Sbjct: 112 -FVLIIYAARLKGLPVAGNIAISYLTGTTFLFGGLAASPSSI------------------ 152
Query: 281 MFATAFISCFCVVIAF----IKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 334
TAF+S + +KD+ D+ GD G KTL +GK + F L+ +L +A
Sbjct: 153 ---TAFLSILSALATLSREIVKDIEDLPGDLAHGAKTLPAFIGKRKSFVLASLVLIVA 207
>sp|A2BIU7|DGGGP_HYPBU Digeranylgeranylglyceryl phosphate synthase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0025 PE=3
SV=1
Length = 302
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAV-MIRSPPFI---WAV 218
IN D+E D V KP+ P+ SG +S G A A L ++ + ++ P FI +AV
Sbjct: 65 INDYYDIETDMVAKPWRPIVSGRVSPGA--ARFYAYMLFTIGLIIALVTCPNFIVFGFAV 122
Query: 219 IAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL--EIF 276
+ + V YS RW + L +++ N T ++ + G+ + +
Sbjct: 123 LNALLV-HEYS------RWIKRTGLPGNIVIAFNSASTIVFGALYASCMIKGKVVLPSVA 175
Query: 277 TRPLMFATAFISCFCVVIA--FIKDLHDVDGDKKFGIKTLSVMLGKERVFRLS 327
P+++A F +V+ F+K + DV GD GI TL+V G + S
Sbjct: 176 LIPVLYA------FLLVLGREFVKGIEDVKGDAIAGIGTLAVRFGVRTAYMAS 222
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLA 204
AIN + DVE+D++NKP P+ SG +S+ T A +L+ LM +
Sbjct: 53 AINDVYDVEIDRINKPDRPIPSGAVSLRT--ATSLSYGLMGVG 93
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 92/227 (40%), Gaps = 22/227 (9%)
Query: 98 LNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLTPAYFTGLMEALVPAVLMH 157
+ VF++K +R C I L+ D+ + + V A
Sbjct: 1 MGVFMEKLKTYLELIRVKNCITASIGGIIGYLISSNFEIDILKSLLVFFVVFFVCA---- 56
Query: 158 IYVVAINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWA 217
Y IN + D+E+D++NKP PL SG+I + + ++ L ++ I I A
Sbjct: 57 -YGNVINDIFDIEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIA 115
Query: 218 VIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFT 277
VI +F+ + F + L G V + V G+ +
Sbjct: 116 VINALFLYLYAKKYKKYKP------IGNFIIGYLTG-------SVFLFGGVAGK--NVMP 160
Query: 278 RPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 324
++F + +S + I +KD D++GDKK G+ +L + GK+ ++
Sbjct: 161 VVILFLCSLLSIWGREI--VKDFEDMEGDKKEGVISLPIKYGKKSLY 205
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 39.3 bits (90), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIW-----A 217
IN D E+D +N+P P+ SG+I G + + L+ A++ P +
Sbjct: 54 INDYYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFTPLPLAGIAMGNS 113
Query: 218 VIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMV------SLNGLLTQFPVYVHIQKYVLGR 271
VI W++ ++ + PL+ S+LAA + G+++ FP+ +L R
Sbjct: 114 VILWLY--ASFLKKTPLIGNISVSYLAASIFLFGGAIQGTQGIISVFPIAGATWGVMLAR 171
Query: 272 PLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSV 328
L IKD D+ GD + G +T ++ G L++
Sbjct: 172 EL-----------------------IKDAEDMPGDNEHGARTFPLLYGIRATIYLAL 205
>sp|A7I9E7|DGGGP_METB6 Digeranylgeranylglyceryl phosphate synthase OS=Methanoregula boonei
(strain 6A8) GN=Mboo_1843 PE=3 SV=1
Length = 279
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 33/187 (17%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
IN D +D +N+P P+ SG +S +A + L+ LA +V +P + +
Sbjct: 54 INDYFDAAIDTINRPDRPIPSGAVSRNAALAWAFSLFLLGLAVSVF-TTPLCMGIALVNA 112
Query: 223 FVGTAYSVQLPLLRWKGNS---------FLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL 273
+ Y+ +L + GN+ FL + LL P+ +L R L
Sbjct: 113 LLLVLYAARLKSTPFFGNAAVAFLSASIFLFGGAYAGWHALLDMLPIAAITFLAMLAREL 172
Query: 274 EIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSI 333
+KD D++GD+ G TL++ +G + ++ + +
Sbjct: 173 -----------------------LKDAEDIEGDRAHGADTLAIRIGVRKTALIAFACTAF 209
Query: 334 AYGAAVV 340
A A+ V
Sbjct: 210 AIAASAV 216
>sp|O27170|DGGGP_METTH Digeranylgeranylglyceryl phosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1098 PE=1 SV=1
Length = 281
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTG-----IAITLASAL---MSLAYAVMIRSPPF 214
IN D E+D +N+P P+ SG IS G I LAS + + L +++ S
Sbjct: 51 INDYFDHEIDAINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLLPGLVVVSSSL 110
Query: 215 IWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLE 274
+ AW R K + + L GL F VLG E
Sbjct: 111 LMVYYAW--------------RLKKRCLVGNITISFLTGLSFVF------GGIVLG---E 147
Query: 275 IFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 334
+ L+ AF+ I +KD+ DV+GD+ G TL + G L+ S + IA
Sbjct: 148 VRASILLGFYAFLMTMAREI--VKDMEDVEGDRAEGATTLPITHGMRISGVLAASFMLIA 205
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 37/172 (21%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIA- 220
AIN DV +D +N+P P+ SG + + A+ + L +L + P I VIA
Sbjct: 69 AINDYFDVRIDSINRPDRPIPSGRMKLKE--ALYFSYTLFALGTLLAFSINP-ICGVIAL 125
Query: 221 -----WIFV-----GTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLG 270
IF GT L + G+SFL + L GL F +++ +
Sbjct: 126 FNSLVLIFYAKTLKGTPLLGNLSIGYLTGSSFLFGASVFGLEGLKALFVLFLLAALAITA 185
Query: 271 RPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKER 322
R + +KD+ D++GDK G TL + +G ++
Sbjct: 186 REI-----------------------VKDIEDMEGDKMEGADTLPLRVGAKK 214
>sp|P39582|MENA_BACSU Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase
OS=Bacillus subtilis (strain 168) GN=menA PE=3 SV=1
Length = 311
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 298 KDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAY---GAAVVVGASSPFL 348
++ D++ DKK G KTL++++G + L + ++AY V+ GA+SP+L
Sbjct: 204 NNIRDIEEDKKGGRKTLAILMGHKGAVTLLAASFAVAYIWVVGLVITGAASPWL 257
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A+N + D+++DK+NKP P+ S IS+G + +M L + M F+ AV+
Sbjct: 56 ALNDIYDLKIDKINKPKRPIPSKRISLGEARIFSYLLVVMGLIIS-MFNITCFLMAVLNS 114
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
I + S +K N + + L G + F +G I ++
Sbjct: 115 IVLQQYAS------TYKKNKIVGNLIVAYLTGSVFIF------GGIAVG---NIDVTIML 159
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 324
F A + + I IKD D++GD K + ++ + G++ ++
Sbjct: 160 FLCALFAMWSREI--IKDYEDIEGDIKEKVISIPIKCGEKSIY 200
>sp|P33326|BCHG_CHLAA Bacteriochlorophyll synthase 34 kDa chain OS=Chloroflexus
aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
GN=bchG PE=4 SV=2
Length = 310
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 18/175 (10%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWI 222
+N +D EVD +N+P+ + SG++S+ +T + + A+ + + + +
Sbjct: 85 VNDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLTWIGASIALFLGRQVAFFVALGLV 144
Query: 223 FVGTAYSVQLPLLRWKGNSFLA-AFCMVSLNGLLTQFPVYVHIQKYVLGRPL--EIFTRP 279
F AYS++ +R K N ++ A +S GL + + PL E T
Sbjct: 145 FA-LAYSLR--PIRGKRNGWIGNALVAISYEGL-------AWMAGHAAFAPLTGESVTIA 194
Query: 280 LMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIA 334
L++ S I + D + GD GI+++ V GK R+ V+ + +A
Sbjct: 195 LLY-----SLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGKVMAARMVVTTMGVA 244
>sp|Q3IHW5|UBIA_PSEHT 4-hydroxybenzoate octaprenyltransferase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=ubiA PE=3 SV=1
Length = 292
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 45/234 (19%)
Query: 131 PVQTLADLTPAYFT-GLMEALVPA-----------VLMHIYVVAINQLSDVEVDKVNKPY 178
P+ TL L P Y+ L A +P+ V+M IN +D ++D K
Sbjct: 23 PIGTLLLLWPTYWALWLANAGMPSLTNFIVFTLGVVIMRSAGCVINDFADRKIDGSVKRT 82
Query: 179 L--PLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLR 236
+ PL SG++S +G AI+L L+++A+ +++ SV LL
Sbjct: 83 MQRPLVSGQVS--SGEAISLFILLITVAFLLVLM-----------------LSVNTILLS 123
Query: 237 WKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPL----EIFTRPLMFATAFISCFCV 292
+ + AFC + TQ P V + P+ I P+ FI+ C
Sbjct: 124 FGALAL--AFCYPFMKRY-TQLPQVVLGAAFGWAIPMAFMASINALPIQAWLLFIANICW 180
Query: 293 VIAF--IKDLHDVDGDKKFGIKTLSVMLGKERVFRLSVSMLSIAYGAAVV-VGA 343
+A+ + + D D D K G+K+ +++ GK R + +L++A+ A ++ +GA
Sbjct: 181 TVAYDTMYAMVDRDDDLKIGVKSTAILFGKYD--RHIIGLLNLAFIALMLSIGA 232
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 91/238 (38%), Gaps = 71/238 (29%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEI-------------SMGTGIA---------ITLASA 199
AIN D+++D +N+P P+ SG + ++GT IA I L ++
Sbjct: 69 AINDYFDIKIDSINRPERPIPSGRVKAKEAFYFSYLLFALGTLIAFSINSICGSIALFNS 128
Query: 200 LMSLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFP 259
L+ + YA ++ P + + G+ + + + G L+ +++
Sbjct: 129 LLLILYAKTLKGTPLLGNLSIGYLTGSVFLFGASIFGFGGIKALSVLFLLA--------- 179
Query: 260 VYVHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLG 319
L I R + +KD+ D++GD G TL + +G
Sbjct: 180 ------------ALAITAREI----------------VKDIEDMEGDSLEGADTLPLRIG 211
Query: 320 KERVFRLSVSMLSIAYGAAVVVGASSPFLAN-------KLITIIGHGILASIFWLRVR 370
++ L++ G V+ + P+ + L+++ G LA+I L VR
Sbjct: 212 AKK-----AGYLAVLTGLLAVILSPLPYFMSVLGLRYIYLVSLADLGFLAAIIQLLVR 264
>sp|A1TJR2|UBIA_ACIAC 4-hydroxybenzoate octaprenyltransferase OS=Acidovorax citrulli
(strain AAC00-1) GN=ubiA PE=3 SV=1
Length = 295
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
Query: 154 VLMHIYVVAINQLSDVEVDKVNK--PYLPLASGEISMGTGIAITLASALMSLAYAVMIRS 211
+LM +N ++D + D+ K P+ SG +S+ + + AL+S + +
Sbjct: 62 ILMRSAGCCVNDVADRDFDRHVKRTAQRPVTSGAVSVREALGVGAVLALVSFGLVLTTNA 121
Query: 212 PPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGR 271
A IAW A ++ P + P V + +G
Sbjct: 122 -----ATIAWSLPALAVTIAYPFAK-----------------RFVSMPQAVLGVAFSMGI 159
Query: 272 PLEIFTR-----PLMFATAFISCFCVVIAFIKD--LHDVDGDKKFGIKTLSVMLGKERV 323
P+ FT P++ A + C V+A+ + + D D D K G+KT ++ LG+ V
Sbjct: 160 PMA-FTAVGGAVPMLAAWLVLGNLCWVLAYDTEYAMVDRDDDLKIGMKTSAITLGRHDV 217
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 149 ALVPAVLMHIYVV-------AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALM 201
AL P +L + V ++N + D+++D++NKP+ P+ S IS+ + + +
Sbjct: 36 ALFPLILAFLVVFFICGFGNSLNDIYDLKIDRINKPFRPIPSKRISLTDAKVFSYSIMIF 95
Query: 202 SLAYAVMIRSPPFIWAVIAWIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVY 261
L + + F+ AV+ A +Q +K N + + L G V+
Sbjct: 96 GLIIS-LFNIYCFLMAVL------NAVVLQKYAKIYKKNKIIGNMLVAYLTG-----SVF 143
Query: 262 VHIQKYVLGRPLEIFTRPLMFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKE 321
+ V + ++ +F+ A S + I IKD D++GD K + +L + G++
Sbjct: 144 IFGGIAVGNVNVSLY----LFSCAMFSMWAREI--IKDYEDIEGDLKEKVSSLPIKYGEK 197
Query: 322 RVF 324
++
Sbjct: 198 SIY 200
>sp|Q3SZP0|IRF1_BOVIN Interferon regulatory factor 1 OS=Bos taurus GN=IRF1 PE=2 SV=1
Length = 322
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 37 LNRSQEKKYAIKCSQSNSFYNLTNKIASSRNCKPFNSHRAPVTLQDGYASKSEDDDHSNS 96
L +SQ K+ K S+ S KP+ + +P T DG +S + DDHSN
Sbjct: 115 LTKSQRKERKSKSSRD---------ARSKAKKKPYGEY-SPDTFSDGLSSSTLPDDHSNY 164
Query: 97 FLNVFLKKFHALYRFMRAYACAGVIIATTSNSLLPVQTLADLT 139
+ ++ + + R + + +T N +PV+ + D T
Sbjct: 165 TVRSYMGQDLDIERTLTPALSPCGVSSTLPNWSIPVEIVPDST 207
>sp|A1S066|DGGGP_THEPD Digeranylgeranylglyceryl phosphate synthase OS=Thermofilum pendens
(strain Hrk 5) GN=Tpen_1449 PE=3 SV=1
Length = 284
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 163 INQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVI--A 220
+N D+E D ++KP+ PL S IS G+ ++ +L LA ++ AV+ A
Sbjct: 64 VNDYFDLESDAISKPWRPLPSRRISPGSAVSASLPLLAAGLALGFLVSPLCGFTAVLASA 123
Query: 221 WIFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPL 280
+F+ YS ++ L GN +A F +++ L P E + L
Sbjct: 124 LLFL---YSWRVKALGLPGNVLIA-------------FLAALNVVYGALASP-EPWRSLL 166
Query: 281 MFATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVFR 325
A AF+ + +K + D++GD G+KT++ LG R
Sbjct: 167 PSAYAFLIILGREV--LKGVEDLEGDAARGVKTVASTLGARAALR 209
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 162 AINQLSDVEVDKVNKPYLPLASGEISMGTGIAITLASALMSLAYAVMIRSPPFIWAVIAW 221
A+N + D+++D++NKP P+ S I++ + + +M L + + F+ AV+
Sbjct: 56 ALNDIYDLKIDRINKPKRPIPSKRITLNNAKVFSYSLVVMGL-FISLFNISCFLMAVLNS 114
Query: 222 IFVGTAYSVQLPLLRWKGNSFLAAFCMVSLNGLLTQFPVYVHIQKYVLGRPLEIFTRPLM 281
I + S +K N + + L G V++ V + I ++
Sbjct: 115 IVLQQYAST------YKKNKIIGNLIVAYLTG-----SVFIFGGIAVGNIDVTI----ML 159
Query: 282 FATAFISCFCVVIAFIKDLHDVDGDKKFGIKTLSVMLGKERVF 324
F A + + I IKD D++GD K + ++ + G+ ++
Sbjct: 160 FLCALFAMWSREI--IKDYEDIEGDLKEKVISIPIKCGERSIY 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,213,607
Number of Sequences: 539616
Number of extensions: 5237767
Number of successful extensions: 15578
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 15479
Number of HSP's gapped (non-prelim): 101
length of query: 402
length of database: 191,569,459
effective HSP length: 120
effective length of query: 282
effective length of database: 126,815,539
effective search space: 35761981998
effective search space used: 35761981998
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)