Query 015719
Match_columns 402
No_of_seqs 116 out of 154
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 17:29:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015719.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015719hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cy5a1 b.55.1.2 (A:31-159) EP 35.3 41 0.003 25.7 6.5 60 37-111 24-83 (129)
2 d2zkmx3 b.55.1.1 (X:11-141) Ph 26.1 22 0.0016 28.0 3.3 43 56-98 13-55 (131)
3 d1vb7a_ b.36.1.1 (A:) PDZ-LIM 21.1 68 0.005 23.1 5.1 22 35-59 64-85 (94)
4 d1wfya_ d.15.1.5 (A:) Regulato 15.2 27 0.002 26.9 1.4 59 17-75 17-79 (104)
5 d1nzia1 b.23.1.1 (A:1-117) Com 13.6 54 0.0039 23.8 2.8 21 308-330 12-32 (117)
6 d2qqma3 b.23.1.1 (A:156-263) M 12.3 72 0.0052 22.5 3.2 24 305-330 3-27 (108)
7 d1wj1a_ b.55.1.2 (A:) Numb {Mo 11.0 1.2E+02 0.0088 23.5 4.4 56 28-100 32-92 (156)
8 d1r7aa1 b.71.1.1 (A:435-504) S 9.8 55 0.004 22.9 1.5 15 16-30 24-38 (70)
9 d2doea1 a.159.2.1 (A:784-853) 9.4 64 0.0047 22.4 1.8 20 341-360 24-43 (70)
10 d2o3ga1 d.145.1.4 (A:180-255) 8.5 1.5E+02 0.011 20.4 3.6 23 379-401 50-74 (76)
No 1
>d2cy5a1 b.55.1.2 (A:31-159) EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.33 E-value=41 Score=25.66 Aligned_cols=60 Identities=10% Similarity=0.194 Sum_probs=39.9
Q ss_pred cHHHHHHHHhcCCCccceEEEEEcCCCCCccceEEEcCCCCeEEEecCCCCeEEEEEEeeCCcceEEEccccccC
Q 015719 37 PICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRLQMRYATSLIGG 111 (402)
Q Consensus 37 sL~~vl~~Lk~~~~~~~~v~i~Ys~~~Pl~~~Ivi~l~~~GirL~Fd~~~QRL~lIEv~d~~~~~L~Y~~~~~~~ 111 (402)
++.+||..|+... .....-..++.|.+...||+| .|+.++.+ ++-+.+.+ ++|++...+.
T Consensus 24 ~~~dAi~~l~~~~----------~~~~~~~q~v~L~Vs~~gi~l-~D~~t~~~--l~~~~i~~--Is~c~~~~~~ 83 (129)
T d2cy5a1 24 TVEDASRKLAVMD----------SQGRVWAQEMLLRVSPSQVTL-LDPVSKEE--LESYPLDA--IVRCDAVMPR 83 (129)
T ss_dssp SHHHHHHHHHHHH----------HTTCCCCEEEEEEECSSEEEE-ECTTTCCE--EEEEEGGG--EEEEEEECCS
T ss_pred HHHHHHHHHHHHH----------hhcCccCceEEEEEeCCeEEE-EeCCCCce--eeccccce--EEEEeecCCC
Confidence 5889999887321 011112468899999999999 59988776 44455553 5777766544
No 2
>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.05 E-value=22 Score=27.96 Aligned_cols=43 Identities=21% Similarity=0.427 Sum_probs=35.2
Q ss_pred EEEEcCCCCCccceEEEcCCCCeEEEecCCCCeEEEEEEeeCC
Q 015719 56 HVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIK 98 (402)
Q Consensus 56 ~i~Ys~~~Pl~~~Ivi~l~~~GirL~Fd~~~QRL~lIEv~d~~ 98 (402)
=++|++.+-...++.+.|.++|..|+..+.++.-..|+|-+.+
T Consensus 13 f~K~~~~~~~~~~~~frlD~~g~~L~W~~~~k~~~~l~i~~I~ 55 (131)
T d2zkmx3 13 FIKWDDETTVASPVILRVDPKGYYLYWTYQSKEMEFLDITSIR 55 (131)
T ss_dssp EEEECTTTCCEEEEEEEECTTSCEEEEEETTSCEEEEEGGGEE
T ss_pred EEEEcCCCCccceEEEEECCCCCEEEEECCCCceeEEEeccee
Confidence 4678888878889999999999999998878777776655554
No 3
>d1vb7a_ b.36.1.1 (A:) PDZ-LIM protein mystique {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.15 E-value=68 Score=23.14 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=17.0
Q ss_pred CCcHHHHHHHHhcCCCccceEEEEE
Q 015719 35 GMPICEAFASIEQQPNIYDVVHVKY 59 (402)
Q Consensus 35 G~sL~~vl~~Lk~~~~~~~~v~i~Y 59 (402)
+++..+|+++||+.. ..|++.-
T Consensus 64 ~~~~~~~~~~l~~~~---~~v~L~V 85 (94)
T d1vb7a_ 64 NMLHAEAQSKIRQSA---SPLRLQL 85 (94)
T ss_dssp TCCHHHHHHHHHTCC---SSEEEEE
T ss_pred CCCHHHHHHHHHcCC---CeEEEEE
Confidence 899999999999854 4565544
No 4
>d1wfya_ d.15.1.5 (A:) Regulator of G-protein signaling 14, RGS14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.16 E-value=27 Score=26.90 Aligned_cols=59 Identities=15% Similarity=0.070 Sum_probs=42.2
Q ss_pred ceeEEEEec-CCcccc-eecCCcHHHHHH-HHhcCCCccceEEEEE-cCCCCCccceEEEcCC
Q 015719 17 GAIVLDLRP-GVGIGP-FSLGMPICEAFA-SIEQQPNIYDVVHVKY-FDEEPLKLDIIISFPD 75 (402)
Q Consensus 17 ~ml~l~l~P-g~gLG~-f~LG~sL~~vl~-~Lk~~~~~~~~v~i~Y-s~~~Pl~~~Ivi~l~~ 75 (402)
..+.|+|.| ++.+|- =+-+.+|.|||. +|.++.-.-..+.+.- +++.|++...-|...+
T Consensus 17 v~F~LdLp~~~k~I~VkaKptK~l~EvLrpIL~KYgl~l~~v~v~~~ge~~~LDl~~pVs~v~ 79 (104)
T d1wfya_ 17 ITFQLELVGLERVVRISAKPTKRLQEALQPILAKHGLSLDQVVLHRPGEKQPMDLENPVSSVA 79 (104)
T ss_dssp EEEEEEESSSSSEEEEEECSSSBTTTTTHHHHTTTTCCTTTCCBCCTTCSSCCCTTSBGGGSS
T ss_pred EEEEEEcCCCCcEEEEEeCCCCcHHHHHHHHHHHhCCChhHeEEEeCCCcccccCCCchhhhc
Confidence 467799999 999995 677889999986 5566655566777765 5566776555555543
No 5
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.61 E-value=54 Score=23.78 Aligned_cols=21 Identities=24% Similarity=0.243 Sum_probs=16.3
Q ss_pred CCCCCcCcCceeeeeEEEecCCC
Q 015719 308 NYPGHADFNSYIKCNFIILGSDC 330 (402)
Q Consensus 308 N~PG~y~Fn~Y~RC~w~I~~~~~ 330 (402)
|+|+.|. ....|.|.|...++
T Consensus 12 ~yP~~Yp--~~~~C~w~I~~p~g 32 (117)
T d1nzia1 12 NYPQAYP--SEVEKSWDIEVPEG 32 (117)
T ss_dssp TTTSCCC--SSEEEEEEEECCTT
T ss_pred CCCCCCC--CCCcEEEEEEcCCC
Confidence 7787665 55789999998764
No 6
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.29 E-value=72 Score=22.45 Aligned_cols=24 Identities=13% Similarity=0.599 Sum_probs=17.5
Q ss_pred eee-CCCCCcCcCceeeeeEEEecCCC
Q 015719 305 MHT-NYPGHADFNSYIKCNFIILGSDC 330 (402)
Q Consensus 305 LHt-N~PG~y~Fn~Y~RC~w~I~~~~~ 330 (402)
+++ |+|+.|.=| ..|.|.|....+
T Consensus 3 i~SP~yP~~Y~~~--~~C~w~I~~p~~ 27 (108)
T d2qqma3 3 IKSPGFPEKYPNS--LECTYIVFAPKM 27 (108)
T ss_dssp EECTTTTSCCCSS--CEEEEEEECGGG
T ss_pred EeCCCCCCCCCCC--CeEEEEEEeCCC
Confidence 344 889877644 479999998764
No 7
>d1wj1a_ b.55.1.2 (A:) Numb {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.97 E-value=1.2e+02 Score=23.49 Aligned_cols=56 Identities=13% Similarity=0.214 Sum_probs=36.2
Q ss_pred cccceecCCc-----HHHHHHHHhcCCCccceEEEEEcCCCCCccceEEEcCCCCeEEEecCCCCeEEEEEEeeCCcc
Q 015719 28 GIGPFSLGMP-----ICEAFASIEQQPNIYDVVHVKYFDEEPLKLDIIISFPDHGFHLRFDPWSQRLRLIEIFDIKRL 100 (402)
Q Consensus 28 gLG~f~LG~s-----L~~vl~~Lk~~~~~~~~v~i~Ys~~~Pl~~~Ivi~l~~~GirL~Fd~~~QRL~lIEv~d~~~~ 100 (402)
=||.+..+.+ +.+++..|++... . ..++.|.+...||+|. |..++.+ |.-+.+.+|
T Consensus 32 YLGs~~v~~~~g~~~v~~ai~~l~~~~~------------k--~~~V~L~Vs~~gi~v~-d~~~~~~--l~~~~l~~I 92 (156)
T d1wj1a_ 32 YLGHVEVDESRGMHICEDAVKRLKATGK------------K--AVKAVLWVSADGLRVV-DEKTKDL--IVDQTIEKV 92 (156)
T ss_dssp EEEEEECSSSCCHHHHHHHHHHHHHHTC------------C--CEEEEEEEETTEEEEE-ETTTTEE--EECCBTTTC
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHhcCC------------C--CCeEEEEEecCccEEE-cCCCCce--eeEEeccEE
Confidence 4666555443 7888888887542 2 3568888999999986 6665544 443444443
No 8
>d1r7aa1 b.71.1.1 (A:435-504) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]}
Probab=9.76 E-value=55 Score=22.89 Aligned_cols=15 Identities=27% Similarity=0.572 Sum_probs=12.1
Q ss_pred cceeEEEEecCCccc
Q 015719 16 MGAIVLDLRPGVGIG 30 (402)
Q Consensus 16 ~~ml~l~l~Pg~gLG 30 (402)
-+..+|...||||||
T Consensus 24 ~s~AtLTFeP~~GlG 38 (70)
T d1r7aa1 24 TSQATLTFEPKRGLG 38 (70)
T ss_dssp SCEEEEEECGGGSCS
T ss_pred cceEEEEEcCCcccc
Confidence 355668889999999
No 9
>d2doea1 a.159.2.1 (A:784-853) Transcription elongation regulator 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.37 E-value=64 Score=22.36 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=16.8
Q ss_pred ccCCCCChHHHHHhhCCCCC
Q 015719 341 KITPNTKWEQVKEILGDCGR 360 (402)
Q Consensus 341 ~it~~~~~~~i~~~l~~~~r 360 (402)
.|++.+.|+++...|..++|
T Consensus 24 ~i~~~s~W~~~~~~~~~DpR 43 (70)
T d2doea1 24 HLDSQSRWSKVKDKVESDPR 43 (70)
T ss_dssp TCCTTCCHHHHHHHHTTSTH
T ss_pred CCCCCCCHHHHHHHhccCHH
Confidence 48999999999999976554
No 10
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=8.53 E-value=1.5e+02 Score=20.38 Aligned_cols=23 Identities=22% Similarity=0.377 Sum_probs=18.1
Q ss_pred eeeCCeEEEEE--cCCceEEEEEee
Q 015719 379 YGYQNIAFEVM--KNGYISTVTMFQ 401 (402)
Q Consensus 379 yG~~giIfEV~--~n~~IasVTlf~ 401 (402)
+=++|+.|||+ ++..|..|-|..
T Consensus 50 v~~~~~~f~V~~~~~~rI~~V~v~~ 74 (76)
T d2o3ga1 50 ADFHGWRFEVVEKEGQRIERVKITK 74 (76)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEEE
T ss_pred EEECCEEEEEEEeeCCeEEEEEEEE
Confidence 34468999998 888999998753
Done!