Query 015720
Match_columns 402
No_of_seqs 288 out of 1882
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 08:56:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015720.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015720hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07214 Pat17_isozyme_like Pat 100.0 6.4E-73 1.4E-77 555.8 35.6 348 15-365 1-349 (349)
2 cd07215 Pat17_PNPLA8_PNPLA9_li 100.0 1.6E-66 3.5E-71 508.4 31.8 328 19-389 1-329 (329)
3 cd07211 Pat_PNPLA8 Patatin-lik 100.0 4.7E-57 1E-61 438.3 28.7 294 11-356 1-308 (308)
4 cd07216 Pat17_PNPLA8_PNPLA9_li 100.0 1.9E-54 4.2E-59 420.0 24.0 294 18-353 1-308 (309)
5 cd07213 Pat17_PNPLA8_PNPLA9_li 100.0 2E-53 4.4E-58 408.7 27.4 274 17-352 1-284 (288)
6 cd07212 Pat_PNPLA9 Patatin-lik 100.0 7.8E-52 1.7E-56 400.3 24.8 286 20-356 1-311 (312)
7 cd07217 Pat17_PNPLA8_PNPLA9_li 100.0 5.7E-51 1.2E-55 398.1 26.5 264 18-309 1-275 (344)
8 cd07199 Pat17_PNPLA8_PNPLA9_li 100.0 1.8E-49 3.8E-54 376.0 25.6 256 20-353 1-257 (258)
9 KOG4231 Intracellular membrane 100.0 1.9E-50 4.2E-55 390.7 16.7 308 11-392 410-732 (763)
10 COG3621 Patatin [General funct 100.0 1.7E-39 3.8E-44 301.2 19.3 194 17-226 8-207 (394)
11 cd07225 Pat_PNPLA6_PNPLA7 Pata 100.0 5.6E-33 1.2E-37 267.8 23.2 269 18-356 15-290 (306)
12 cd07205 Pat_PNPLA6_PNPLA7_NTE1 100.0 5.5E-33 1.2E-37 248.1 17.9 163 20-229 2-164 (175)
13 cd07207 Pat_ExoU_VipD_like Exo 100.0 3.1E-32 6.6E-37 247.1 16.4 171 21-225 2-185 (194)
14 KOG0513 Ca2+-independent phosp 100.0 4.4E-32 9.5E-37 273.3 18.3 389 9-402 26-455 (503)
15 cd07228 Pat_NTE_like_bacteria 100.0 3.8E-31 8.3E-36 236.2 16.4 162 20-229 2-164 (175)
16 cd07210 Pat_hypo_W_succinogene 100.0 3.2E-31 6.8E-36 244.9 15.4 178 20-262 2-179 (221)
17 cd07227 Pat_Fungal_NTE1 Fungal 100.0 1.5E-30 3.3E-35 245.7 20.1 243 18-322 10-256 (269)
18 PRK10279 hypothetical protein; 100.0 1.4E-27 2.9E-32 229.2 25.1 179 18-260 5-183 (300)
19 cd07209 Pat_hypo_Ecoli_Z1214_l 100.0 1.6E-28 3.4E-33 226.3 16.4 167 21-262 1-170 (215)
20 cd07208 Pat_hypo_Ecoli_yjju_li 100.0 5.1E-28 1.1E-32 230.3 20.2 166 21-229 1-170 (266)
21 cd07198 Patatin Patatin-like p 99.9 3E-26 6.6E-31 204.0 12.3 160 21-226 1-163 (172)
22 cd07218 Pat_iPLA2 Calcium-inde 99.9 2.9E-25 6.2E-30 207.7 14.4 161 21-224 3-166 (245)
23 cd07232 Pat_PLPL Patain-like p 99.9 1.8E-24 3.9E-29 215.8 17.8 184 17-227 66-261 (407)
24 cd07204 Pat_PNPLA_like Patatin 99.9 9.4E-25 2E-29 204.6 14.7 164 21-225 2-168 (243)
25 cd07222 Pat_PNPLA4 Patatin-lik 99.9 6.3E-25 1.4E-29 206.1 13.0 164 21-224 2-168 (246)
26 cd07221 Pat_PNPLA3 Patatin-lik 99.9 1.5E-24 3.2E-29 203.6 14.8 163 21-224 3-168 (252)
27 cd07230 Pat_TGL4-5_like Triacy 99.9 2.2E-24 4.8E-29 216.0 17.0 186 17-227 72-272 (421)
28 COG1752 RssA Predicted esteras 99.9 5.6E-24 1.2E-28 206.3 17.8 172 18-228 11-186 (306)
29 cd07219 Pat_PNPLA1 Patatin-lik 99.9 5.2E-24 1.1E-28 206.7 13.9 167 18-225 12-181 (382)
30 cd07220 Pat_PNPLA2 Patatin-lik 99.9 4.1E-23 8.8E-28 193.3 13.8 166 19-225 5-173 (249)
31 PF01734 Patatin: Patatin-like 99.9 1E-23 2.3E-28 188.9 8.2 185 21-228 1-204 (204)
32 cd07224 Pat_like Patatin-like 99.9 2.2E-22 4.7E-27 187.5 12.4 157 21-225 2-164 (233)
33 cd07229 Pat_TGL3_like Triacylg 99.8 3.5E-20 7.5E-25 182.1 18.5 184 17-224 82-294 (391)
34 cd07223 Pat_PNPLA5-mammals Pat 99.8 7.6E-21 1.7E-25 183.8 13.5 166 18-224 9-177 (405)
35 cd07206 Pat_TGL3-4-5_SDP1 Tria 99.8 1.8E-20 3.9E-25 177.9 12.5 146 17-228 68-217 (298)
36 KOG2968 Predicted esterase of 99.8 1.3E-19 2.7E-24 186.7 18.1 163 19-228 840-1008(1158)
37 cd07231 Pat_SDP1-like Sugar-De 99.8 5.4E-20 1.2E-24 174.8 14.4 146 17-226 67-227 (323)
38 COG4667 Predicted esterase of 99.8 1.1E-19 2.3E-24 165.9 12.8 166 18-227 11-180 (292)
39 TIGR03607 patatin-related prot 99.8 9.2E-18 2E-22 176.4 19.3 203 19-231 4-294 (739)
40 cd01819 Patatin_and_cPLA2 Pata 99.8 1.2E-18 2.6E-23 152.4 10.0 139 21-227 1-142 (155)
41 KOG2214 Predicted esterase of 99.5 3.9E-14 8.5E-19 139.7 11.0 180 17-224 173-369 (543)
42 KOG0513 Ca2+-independent phosp 99.3 6.9E-12 1.5E-16 127.3 8.1 192 17-259 293-503 (503)
43 KOG3773 Adiponutrin and relate 99.0 1.9E-10 4E-15 108.6 4.5 164 19-225 7-174 (354)
44 cd00147 cPLA2_like Cytosolic p 97.4 0.00029 6.3E-09 71.2 6.7 52 17-77 42-95 (438)
45 cd07202 cPLA2_Grp-IVC Group IV 93.8 0.063 1.4E-06 53.8 3.9 52 16-76 38-90 (430)
46 cd07201 cPLA2_Grp-IVB-IVD-IVE- 90.8 0.4 8.6E-06 49.6 5.4 51 17-76 53-104 (541)
47 PF01735 PLA2_B: Lysophospholi 88.9 0.53 1.1E-05 48.8 4.6 56 20-76 2-58 (491)
48 KOG1325 Lysophospholipase [Lip 85.9 0.67 1.4E-05 48.1 3.2 60 16-77 47-107 (571)
49 smart00022 PLAc Cytoplasmic ph 83.6 0.98 2.1E-05 47.3 3.3 59 17-77 76-135 (549)
50 cd07200 cPLA2_Grp-IVA Group IV 83.2 0.77 1.7E-05 47.4 2.3 50 17-75 44-94 (505)
51 cd07203 cPLA2_Fungal_PLB Funga 74.6 1.5 3.1E-05 45.8 1.2 61 17-77 63-125 (552)
52 PF05728 UPF0227: Uncharacteri 73.3 6.1 0.00013 35.5 4.8 36 33-75 42-77 (187)
53 PRK00175 metX homoserine O-ace 68.3 11 0.00024 37.5 6.0 18 60-77 150-167 (379)
54 PF03575 Peptidase_S51: Peptid 63.4 10 0.00022 32.6 4.0 12 60-71 71-82 (154)
55 PF00756 Esterase: Putative es 59.9 20 0.00044 32.9 5.7 18 59-76 117-134 (251)
56 PF01764 Lipase_3: Lipase (cla 57.8 17 0.00037 30.1 4.4 17 60-76 67-83 (140)
57 TIGR01392 homoserO_Ac_trn homo 52.9 33 0.00071 33.6 6.1 18 60-77 130-147 (351)
58 PRK04940 hypothetical protein; 48.0 38 0.00083 30.2 5.1 43 31-76 37-79 (180)
59 PF03959 FSH1: Serine hydrolas 47.3 23 0.00049 32.2 3.7 19 58-76 103-121 (212)
60 PRK05282 (alpha)-aspartyl dipe 46.9 24 0.00051 32.9 3.8 14 60-73 115-128 (233)
61 COG3150 Predicted esterase [Ge 46.0 38 0.00083 30.0 4.6 37 33-76 42-78 (191)
62 KOG2551 Phospholipase/carboxyh 43.7 26 0.00056 32.3 3.4 34 35-76 90-123 (230)
63 smart00827 PKS_AT Acyl transfe 42.5 62 0.0014 30.7 6.1 32 57-95 82-113 (298)
64 PF07859 Abhydrolase_3: alpha/ 42.1 20 0.00043 31.9 2.5 17 60-76 74-90 (211)
65 PF06437 ISN1: IMP-specific 5' 39.1 2.4E+02 0.0053 28.3 9.4 78 314-391 228-321 (408)
66 PF00698 Acyl_transf_1: Acyl t 37.5 68 0.0015 31.0 5.6 33 56-95 83-115 (318)
67 TIGR00128 fabD malonyl CoA-acy 37.4 79 0.0017 29.8 5.9 34 56-96 82-115 (290)
68 COG0331 FabD (acyl-carrier-pro 36.2 99 0.0021 30.1 6.3 81 31-138 68-152 (310)
69 TIGR03131 malonate_mdcH malona 35.9 93 0.002 29.6 6.2 31 57-94 76-106 (295)
70 PF06361 RTBV_P12: Rice tungro 35.9 18 0.00038 27.7 0.9 44 27-73 46-89 (110)
71 TIGR02069 cyanophycinase cyano 33.9 54 0.0012 30.8 4.0 13 60-72 118-130 (250)
72 PF15595 Imm31: Immunity prote 33.8 57 0.0012 26.5 3.6 28 359-391 62-89 (107)
73 cd03145 GAT1_cyanophycinase Ty 33.6 67 0.0014 29.4 4.5 45 18-73 84-132 (217)
74 PLN02752 [acyl-carrier protein 33.0 1.1E+02 0.0024 29.9 6.3 34 56-96 123-156 (343)
75 PF07819 PGAP1: PGAP1-like pro 32.4 76 0.0017 29.2 4.7 17 60-76 88-104 (225)
76 PRK11071 esterase YqiA; Provis 32.1 1.4E+02 0.003 26.4 6.3 18 60-77 64-81 (190)
77 cd03129 GAT1_Peptidase_E_like 31.0 1.1E+02 0.0023 27.7 5.4 15 60-74 116-130 (210)
78 KOG1454 Predicted hydrolase/ac 30.2 94 0.002 30.4 5.2 55 17-77 86-148 (326)
79 PRK06489 hypothetical protein; 29.7 60 0.0013 31.9 3.8 20 58-77 155-174 (360)
80 COG3340 PepE Peptidase E [Amin 29.6 38 0.00083 31.1 2.1 44 18-72 85-132 (224)
81 cd00741 Lipase Lipase. Lipase 29.5 43 0.00094 28.3 2.4 17 60-76 31-47 (153)
82 PRK10162 acetyl esterase; Prov 29.3 67 0.0015 31.1 4.0 17 60-76 157-173 (318)
83 PF00975 Thioesterase: Thioest 28.6 44 0.00095 30.0 2.5 18 58-75 67-84 (229)
84 PRK05077 frsA fermentation/res 28.5 1.1E+02 0.0023 31.1 5.4 18 60-77 268-285 (414)
85 PRK13604 luxD acyl transferase 28.3 1.4E+02 0.003 29.0 5.9 18 59-76 110-127 (307)
86 PLN02408 phospholipase A1 28.3 94 0.002 31.0 4.8 17 60-76 203-219 (365)
87 TIGR03695 menH_SHCHC 2-succiny 27.9 43 0.00093 29.5 2.2 18 60-77 73-90 (251)
88 PRK06765 homoserine O-acetyltr 27.3 84 0.0018 31.6 4.4 22 56-77 160-181 (389)
89 PF12697 Abhydrolase_6: Alpha/ 26.5 51 0.0011 28.4 2.5 17 60-76 69-85 (228)
90 PLN02571 triacylglycerol lipas 26.2 92 0.002 31.6 4.4 17 60-76 229-245 (413)
91 PHA02857 monoglyceride lipase; 26.0 47 0.001 30.8 2.2 18 60-77 100-117 (276)
92 cd00519 Lipase_3 Lipase (class 25.1 52 0.0011 30.0 2.3 17 60-76 131-147 (229)
93 COG1647 Esterase/lipase [Gener 24.9 52 0.0011 30.5 2.1 18 60-77 88-105 (243)
94 cd03146 GAT1_Peptidase_E Type 24.8 1.2E+02 0.0027 27.5 4.7 14 60-73 116-129 (212)
95 PF12695 Abhydrolase_5: Alpha/ 24.8 60 0.0013 26.4 2.5 17 60-76 64-80 (145)
96 COG0657 Aes Esterase/lipase [L 24.7 78 0.0017 30.3 3.5 17 60-76 155-171 (312)
97 PRK10673 acyl-CoA esterase; Pr 24.5 56 0.0012 29.6 2.4 18 60-77 84-101 (255)
98 PF00326 Peptidase_S9: Prolyl 24.1 60 0.0013 29.0 2.5 17 60-76 67-83 (213)
99 cd00312 Esterase_lipase Estera 23.9 1E+02 0.0023 31.6 4.5 39 33-76 157-195 (493)
100 TIGR01250 pro_imino_pep_2 prol 23.7 57 0.0012 29.7 2.3 18 60-77 99-116 (288)
101 PRK11126 2-succinyl-6-hydroxy- 23.6 60 0.0013 29.2 2.4 18 60-77 69-86 (242)
102 PLN02454 triacylglycerol lipas 22.5 1.6E+02 0.0036 29.8 5.3 16 60-75 231-246 (414)
103 PLN02324 triacylglycerol lipas 22.4 1.4E+02 0.003 30.4 4.8 16 60-75 218-233 (415)
104 PRK10439 enterobactin/ferric e 22.2 2.8E+02 0.006 28.1 7.0 18 60-77 291-308 (411)
105 PRK08775 homoserine O-acetyltr 22.1 64 0.0014 31.4 2.4 18 60-77 141-158 (343)
106 PRK07581 hypothetical protein; 21.7 66 0.0014 31.1 2.4 19 59-77 126-144 (339)
107 PF08250 Sperm_act_pep: Sperm- 21.6 34 0.00073 15.5 0.1 7 22-28 3-9 (10)
108 PRK10566 esterase; Provisional 21.1 61 0.0013 29.5 1.9 18 60-77 110-127 (249)
109 COG2267 PldB Lysophospholipase 21.1 1.4E+02 0.0031 28.6 4.6 20 58-77 108-127 (298)
110 PF08343 RNR_N: Ribonucleotide 21.1 99 0.0021 23.8 2.7 34 343-387 20-53 (82)
111 PLN02298 hydrolase, alpha/beta 21.0 63 0.0014 31.1 2.1 18 60-77 137-154 (330)
112 COG2819 Predicted hydrolase of 21.0 1.3E+02 0.0027 28.7 3.9 50 21-75 106-155 (264)
113 PLN02802 triacylglycerol lipas 20.9 1.3E+02 0.0028 31.4 4.2 16 60-75 333-348 (509)
114 TIGR02240 PHA_depoly_arom poly 20.9 73 0.0016 29.7 2.4 18 60-77 94-111 (276)
115 TIGR02427 protocat_pcaD 3-oxoa 20.4 70 0.0015 28.2 2.1 18 60-77 82-99 (251)
116 TIGR03611 RutD pyrimidine util 20.4 73 0.0016 28.4 2.3 17 60-76 83-99 (257)
117 TIGR02821 fghA_ester_D S-formy 20.2 72 0.0016 30.0 2.2 18 60-77 141-158 (275)
118 PF00135 COesterase: Carboxyle 20.0 1.1E+02 0.0024 31.4 3.8 44 27-75 182-226 (535)
No 1
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=100.00 E-value=6.4e-73 Score=555.77 Aligned_cols=348 Identities=63% Similarity=1.046 Sum_probs=299.1
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHH
Q 015720 15 ANLITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFY 94 (402)
Q Consensus 15 ~~~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y 94 (402)
++++|||||||||+||+++++||++||++++++.|++.+++++||+|+|||||||||++|+.+..+++|+++++|+.++|
T Consensus 1 ~~~~rILslDGGGiRGi~~a~iL~~lE~~l~~~~g~~~~i~~~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y 80 (349)
T cd07214 1 GKFITVLSIDGGGIRGIIPATILEFLEGKLQELDGPDARIADYFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFY 80 (349)
T ss_pred CCceEEEEECCCchhhHHHHHHHHHHHHHHHHhcCCCCCHhHhCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHH
Confidence 46799999999999999999999999999998888888999999999999999999999999877789999999999999
Q ss_pred HHhCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCC
Q 015720 95 IRHGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASP 174 (402)
Q Consensus 95 ~~~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~ 174 (402)
.+.+.+||++....+. .+++.+..+.+++|+++.|+++|+++|++.+|.|+.++++|++||+.+++|++|++|....+.
T Consensus 81 ~~~~~~iF~~~~~~~~-~~~~~~~~~~~~~y~~~~L~~~L~~~~gd~~l~d~~~~v~I~a~dl~~~~p~~F~~~~~~~~~ 159 (349)
T cd07214 81 LENGPKIFPQSTGQFE-DDRKKLRSLLGPKYDGVYLHDLLNELLGDTRLSDTLTNVVIPTFDIKLLQPVIFSSSKAKNDK 159 (349)
T ss_pred HHhhHHhcCCCcccch-hHHHHHHHhccCccCcHHHHHHHHHHhccccHhhhCCceEEEeEECCCCCeEEEeCccccCCc
Confidence 9999999987642222 233445666789999999999999999999999999999999999999999999999876666
Q ss_pred CCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhc-CCCCCCCCCCCCCceE
Q 015720 175 DLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILK-NPDFCPINPLDYTRFL 253 (402)
Q Consensus 175 ~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~-~~~~~p~~~~~~~~~~ 253 (402)
..+.++||||+||||||+||||+.+...+..|..+++.||||||++|||+++|+.||.+.... .+.++..+..+.++++
T Consensus 160 ~~~~~l~da~rASSAaPtyFpp~~i~~~~~~g~~~~~~~vDGGv~aNNP~~~A~~ea~~~~~~~~~~~~~~~~~~~~~i~ 239 (349)
T cd07214 160 LTNARLADVCISTSAAPTYFPAHYFTTEDSNGDIREFNLVDGGVAANNPTLLAISEVTKEIIKDNPFFASIKPLDYKKLL 239 (349)
T ss_pred ccCcCHHHHHHHhcccccccCCeEeecccCCCCcceEEEecCceecCCHHHHHHHHHHHhhhccCcccccccCCCCCeEE
Confidence 678999999999999999999999875432233345689999999999999999999875321 2222222334567899
Q ss_pred EEEecCCCCCCCcccchhhhcccccccccccCCCchHHHHHHhhhhhHHHHHHHHHHHhcCCCCcEEEeecCCCCCCCcc
Q 015720 254 VISIGTGSKKSEHKYNAKMASKWGIISWLYDNGDTPLLDCYGRAIGDMVDYHISVVFQALQSEDNYLRIEDDTLQGDVTS 333 (402)
Q Consensus 254 vlSiGTG~~~~~~~~~~~~~~~~g~~~w~~~~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~~~~Y~Ri~~~~~~~~~~~ 333 (402)
|||||||..... +..++..+||+++|+......||++++|+++++++|++++++|+.+.++++|+|||++.+.....+
T Consensus 240 vlSiGTG~~~~~--~~~~~~~~wG~~~W~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~Y~Ri~~~~~~~~~~~ 317 (349)
T cd07214 240 VLSLGTGSAEES--YKYNAAAKWGLITWLSENGXTPIIDIFSNASSDMVDYHLSVIFQALDSEKNYLRIQDDSLTGTASS 317 (349)
T ss_pred EEEecCCCcccc--cChhhhccCCeeecccccCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCCCCcccC
Confidence 999999996543 555666899999999665557899999999999999999999987778899999998655544478
Q ss_pred cccccHHHHHHHHHHHHHHhcccccccccCCC
Q 015720 334 IDLTTKENFENLVRAGETLLKKPVSRINLDTG 365 (402)
Q Consensus 334 lD~~s~~~i~~L~~~a~~~l~~~~~~~~~~~~ 365 (402)
||+++++||+.|+.+|+++++++...+|++||
T Consensus 318 ~d~~~~~ni~~L~~~a~~~l~~~~~~~~~~~~ 349 (349)
T cd07214 318 VDDATEENLEKLVEIGKKLLKKPVSRVNLETG 349 (349)
T ss_pred cccCCHHHHHHHHHHHHHHHhCcccccCCCCC
Confidence 99999999999999999999999999999997
No 2
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=1.6e-66 Score=508.37 Aligned_cols=328 Identities=38% Similarity=0.660 Sum_probs=279.6
Q ss_pred EEEEEeCCchhHHHHHHHHHHHHHHhhhhcC-CCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 19 TILSIDGGGIRGIIPGVILAYLESQLQELDG-EDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 19 ~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g-~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
|||||||||+||+++++||++||+++++..| ++.+++++||+|+|||||||||++|+.+..++++.++++|+.++|.+.
T Consensus 1 rILslDGGGirG~~~~~iL~~le~~l~~~~g~~~~~i~~~fDli~GTStGgiia~~l~~~~~~g~~~~s~~e~~~~y~~~ 80 (329)
T cd07215 1 RILSIDGGGIRGIIPATILVSVEEKLQKKTGNPEARLADYFDLVAGTSTGGILTCLYLCPNESGRPKFSAKEALNFYLER 80 (329)
T ss_pred CEEEEcCChHHHHHHHHHHHHHHHHHhhhcCCCCCcHhhccCeeeccCHHHHHHHHHhCCCCCCCCCcCHHHHHHHHHHh
Confidence 6999999999999999999999999987665 356899999999999999999999987766678899999999999999
Q ss_pred CCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLD 177 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~ 177 (402)
+.+||+... +. .+. ...++++++|+.+.|+++|+++||+.+|.|+.++++|++||+.+++|++|+++....++..+
T Consensus 81 ~~~IF~~~~--~~-~~~-~~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~i~a~d~~~~~~~~f~~~~~~~~~~~~ 156 (329)
T cd07215 81 GNYIFKKKI--WN-KIK-SRGGFLNEKYSHKPLEEVLLEYFGDTKLSELLKPCLITSYDIERRSPHFFKSHTAIKNEQRD 156 (329)
T ss_pred hHhhcccch--hh-hhh-hhccccccccCcHHHHHHHHHHhCCCchhhhcCCceEEeeecCCCCceEecCcccCCCcccC
Confidence 999998753 22 111 23355789999999999999999999999999999999999999999999998765555678
Q ss_pred chHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCceEEEEe
Q 015720 178 AQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPLDYTRFLVISI 257 (402)
Q Consensus 178 ~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~~~~~~~vlSi 257 (402)
+.+|||++||||+|+||||+.++..+ | +++.|||||+++|||+++|+.||.+..++.+ ...+.++++||||
T Consensus 157 ~~l~da~~ASsAaP~~F~p~~i~~~~--g--~~~~~vDGGv~aNnP~~~a~~ea~~~~~~~~-----~~~~~~~i~vlSi 227 (329)
T cd07215 157 FYVRDVARATSAAPTYFEPARIHSLT--G--EKYTLIDGGVFANNPTLCAYAEARKLKFEQP-----GKPTAKDMIILSL 227 (329)
T ss_pred ccHHHHhHHHhhcccccCceEeecCC--C--cEEEEecCceecCCHHHHHHHHHHHhhccCc-----CCCCcCceEEEEe
Confidence 89999999999999999999987542 4 2457999999999999999999977532211 1123467999999
Q ss_pred cCCCCCCCcccchhhhcccccccccccCCCchHHHHHHhhhhhHHHHHHHHHHHhcCCCCcEEEeecCCCCCCCcccccc
Q 015720 258 GTGSKKSEHKYNAKMASKWGIISWLYDNGDTPLLDCYGRAIGDMVDYHISVVFQALQSEDNYLRIEDDTLQGDVTSIDLT 337 (402)
Q Consensus 258 GTG~~~~~~~~~~~~~~~~g~~~w~~~~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~~~~Y~Ri~~~~~~~~~~~lD~~ 337 (402)
|||..... ++..+..+||.++|+ .+|++++|+++++.+|+++++++....++++|+|||++ ++....+||++
T Consensus 228 GTG~~~~~--~~~~~~~~wG~~~W~-----~~l~~~~~~~~~~~~d~~~~~l~~~~~~~~~Y~Ri~~~-l~~~~~~lD~a 299 (329)
T cd07215 228 GTGKNKKS--YTYEKVKDWGLLGWA-----KPLIDIMMDGASQTVDYQLKQIFDAEGDQQQYLRIQPE-LEDADPEMDDA 299 (329)
T ss_pred cCCCCCCC--CCHHHhcccCcccch-----HHHHHHHHhhhHHHHHHHHHHHHhhcCCCCceEEEeCC-CCCCccccccC
Confidence 99996543 556677899999998 47999999999999999999999766678999999986 66666789999
Q ss_pred cHHHHHHHHHHHHHHhcccccccccCCCccccccCCCCCchHHHHHHHHHHH
Q 015720 338 TKENFENLVRAGETLLKKPVSRINLDTGLYEPIENGSAGTNEEALKRFAKML 389 (402)
Q Consensus 338 s~~~i~~L~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~a~~l 389 (402)
+++||+.|++.|++|++ +|++.|++|++.|
T Consensus 300 ~~~~i~~L~~~~~~~~~----------------------~~~~~i~~~~~~~ 329 (329)
T cd07215 300 SPENLEKLREVGQALAE----------------------DHKDQLDEIVDRL 329 (329)
T ss_pred CHHHHHHHHHHHHHHHH----------------------HhHHHHHHHHHhC
Confidence 99999999999999994 5678898888765
No 3
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=100.00 E-value=4.7e-57 Score=438.32 Aligned_cols=294 Identities=28% Similarity=0.391 Sum_probs=233.6
Q ss_pred CCCCCCceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHH
Q 015720 11 PPTYANLITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDI 90 (402)
Q Consensus 11 pp~~~~~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~ 90 (402)
||++++++|||||||||+||++++++|++||++++. +++++||+|+|||+|||||++|+.+. ++++|+
T Consensus 1 ~~~~~~~~riLsLdGGGirG~~~~~vL~~Le~~~~~------~i~~~fDli~GTStGgiiA~~la~~~------~~~~e~ 68 (308)
T cd07211 1 PPVKGRGIRILSIDGGGTRGVVALEILRKIEKLTGK------PIHELFDYICGVSTGAILAFLLGLKK------MSLDEC 68 (308)
T ss_pred CCCCCCCcEEEEECCChHHHHHHHHHHHHHHHHhCC------CchhhcCEEEecChhHHHHHHHhccc------ccHHHH
Confidence 788999999999999999999999999999998643 68999999999999999999999753 789999
Q ss_pred HHHHHHhCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccC-----CceEEeee--cCCCCcce
Q 015720 91 VPFYIRHGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTL-----TNVAIPTF--DIKKLQPT 163 (402)
Q Consensus 91 ~~~y~~~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~-----~~l~V~a~--d~~~~~p~ 163 (402)
.++|.+++.++|.... ++. .. ....+.+++|+.+.|+++|+++||+.++.+.. .+++|+++ +..+.+|+
T Consensus 69 ~~~y~~~~~~iF~~~~-~~~-~~--~~~~~~~~~y~~~~l~~~l~~~~g~~~l~~~~~~~~~p~~~v~st~~~~~~~~p~ 144 (308)
T cd07211 69 EELYRKLGKDVFSQNT-YIS-GT--SRLVLSHAYYDTETWEKILKEMMGSDELIDTSADPNCPKVACVSTQVNRTPLKPY 144 (308)
T ss_pred HHHHHHHHHHhcCCCc-ccc-ch--hhhhccCCccChHHHHHHHHHHhCCccccccccCCCCCEEEEEEEeccCCCCceE
Confidence 9999999999998754 111 00 01123578999999999999999998887643 23556665 55577999
Q ss_pred eecCCCCCCCC------CCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhc
Q 015720 164 IFSSFQVAASP------DLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILK 237 (402)
Q Consensus 164 ~f~~~~~~~~~------~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~ 237 (402)
+|+||..+... ..+.++|||+|||||+|+||||+++++ ..|+|||+.+|||+..|+.||.+ +|
T Consensus 145 ~f~ny~~~~~~~~~~~~~~~~~l~dA~rASsAaP~~F~p~~i~~---------~~~vDGGv~aNnP~~~a~~ea~~-~~- 213 (308)
T cd07211 145 VFRNYNHPPGTRSHYLGSCKHKLWEAIRASSAAPGYFEEFKLGN---------NLHQDGGLLANNPTALALHEAKL-LW- 213 (308)
T ss_pred EEeCCCCCCCcccccCCcccccHHHHHHHhccchhcCCcEEECC---------CeEEECCcccCCcHHHHHHHHHH-hC-
Confidence 99999865332 346789999999999999999999863 27999999999999999999864 44
Q ss_pred CCCCCCCCCCCCCceEEEEecCCCCCCCcccchhhhcccccccccccCCCchHHHHHHhh-hhhHHHHHHHHHHHhcCCC
Q 015720 238 NPDFCPINPLDYTRFLVISIGTGSKKSEHKYNAKMASKWGIISWLYDNGDTPLLDCYGRA-IGDMVDYHISVVFQALQSE 316 (402)
Q Consensus 238 ~~~~~p~~~~~~~~~~vlSiGTG~~~~~~~~~~~~~~~~g~~~w~~~~~~~~l~~~~~~a-~~~~~~~~~~~l~~~~~~~ 316 (402)
|.. +..+|||||||..+..... ..++..+|. .+++++++.+ +++.+|+++++++ .+
T Consensus 214 -----~~~----~i~~vlSiGTG~~~~~~~~-----~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~----~~ 270 (308)
T cd07211 214 -----PDT----PIQCLVSVGTGRYPSSVRL-----ETGGYTSLK-----TKLLNLIDSATDTERVHTALDDLL----PP 270 (308)
T ss_pred -----CCC----CCcEEEEeCCCCCCCcccc-----hhhhhHHHH-----HHHHHHHHHccChHHHHHHHHHhc----CC
Confidence 322 3458999999996543211 123334565 3577777766 4578888877654 47
Q ss_pred CcEEEeecCCCCCCCcccccccHHHHHHHHHHHHHHhccc
Q 015720 317 DNYLRIEDDTLQGDVTSIDLTTKENFENLVRAGETLLKKP 356 (402)
Q Consensus 317 ~~Y~Ri~~~~~~~~~~~lD~~s~~~i~~L~~~a~~~l~~~ 356 (402)
++|||||++ ++.+ .+||++++++|+.|+..|++|++++
T Consensus 271 ~~Y~R~~~~-~~~~-~~ld~~~~~~i~~l~~~~~~yl~~~ 308 (308)
T cd07211 271 DVYFRFNPV-MSEC-VELDETRPEKLDQLQDDTLEYIKRN 308 (308)
T ss_pred CceEEeccc-ccCC-CCcccCCHHHHHHHHHHHHHHHhcC
Confidence 899999986 5555 8999999999999999999999753
No 4
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=1.9e-54 Score=419.98 Aligned_cols=294 Identities=27% Similarity=0.362 Sum_probs=232.0
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcC--CCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHH
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDG--EDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYI 95 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g--~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~ 95 (402)
+|||||||||+||++++++|++||++++...| +.++++++||+|+|||||||||++|+.. .++++|+.++|.
T Consensus 1 ~rILslDGGGiRGl~~~~iL~~le~~l~~~~~~~~~~~~~~~fDli~GTStGgiiA~~l~~~------~~t~~e~~~~y~ 74 (309)
T cd07216 1 LNLLSLDGGGVRGLSSLLILKEIMERIDPKEGLDEPPKPCDYFDLIGGTSTGGLIAIMLGRL------RMTVDECIDAYT 74 (309)
T ss_pred CcEEEEcCCchhHHHHHHHHHHHHHHhhhccccCCCCChhHhcCeeeeccHHHHHHHHhccc------CCCHHHHHHHHH
Confidence 48999999999999999999999999875433 3467899999999999999999999853 389999999999
Q ss_pred HhCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHccccccc---------ccCCceEEeeecCC-CCcceee
Q 015720 96 RHGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLH---------QTLTNVAIPTFDIK-KLQPTIF 165 (402)
Q Consensus 96 ~~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~---------d~~~~l~V~a~d~~-~~~p~~f 165 (402)
+++++||++.. ... . ....+.++.|+.+.+++.|+++|++..+. +..++++|++++.. +++|++|
T Consensus 75 ~~~~~iF~~~~-~~~-~---~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~~~~~f 149 (309)
T cd07216 75 RLAKKIFSRKR-LRL-I---IGDLRTGARFDSKKLAEAIKVILKELGNDEDDLLDEGEEDGCKVFVCATDKDVTGKAVRL 149 (309)
T ss_pred HHhHHhCCCCC-ccc-c---ccccccCCCCChHHHHHHHHHHHHhcCCCchhhhccccccCCCEEEEEEeeCCCCceEEE
Confidence 99999998754 111 1 11223467899999999999999865443 24568999999998 9999999
Q ss_pred cCCCCCCCC--CCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCC
Q 015720 166 SSFQVAASP--DLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCP 243 (402)
Q Consensus 166 ~~~~~~~~~--~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p 243 (402)
++|+..... ..++.+|+|++||||+|+||+|+++... + ..|+|||+.+|||+..|+.||.+. |.. +
T Consensus 150 ~~y~~~~~~~~~~~~~l~~a~rASsAaP~~f~p~~~~~~---~----~~~vDGGv~~NnP~~~a~~ea~~~-~~~----~ 217 (309)
T cd07216 150 RSYPSKDEPSLYKNATIWEAARATSAAPTFFDPVKIGPG---G----RTFVDGGLGANNPIREVWSEAVSL-WEG----L 217 (309)
T ss_pred ecCCCCCCCCcccCccHHHHHHHHhhhHhhCCCEEecCC---C----ceEecCCcccCCcHHHHHHHHHHH-hCC----C
Confidence 999865433 6778999999999999999999998411 2 379999999999999999999764 410 1
Q ss_pred CCCCCCCceEEEEecCCCCCCCcccchhhhcccccccccccCCCchHHHHHHhhhhhHHHHHHHHHHHhcCCCCcEEEee
Q 015720 244 INPLDYTRFLVISIGTGSKKSEHKYNAKMASKWGIISWLYDNGDTPLLDCYGRAIGDMVDYHISVVFQALQSEDNYLRIE 323 (402)
Q Consensus 244 ~~~~~~~~~~vlSiGTG~~~~~~~~~~~~~~~~g~~~w~~~~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~~~~Y~Ri~ 323 (402)
+...++|||||||..+.. ... .++++++|. .+++++++++..+..+++.+.. .+..+++|||||
T Consensus 218 ----~~~~~~vlSiGTG~~~~~--~~~---~~~~~~~~~-----~~l~~~~~d~~~~~~~~~~~~~--~~~~~~~Y~R~n 281 (309)
T cd07216 218 ----ARLVGCLVSIGTGTPSIK--SLG---RSAEGAGLL-----KGLKDLVTDTEAEAKRFSAEHS--ELDEEGRYFRFN 281 (309)
T ss_pred ----CCCccEEEEECCCCCCCc--ccc---cchhHHHHH-----HHHHHHhhChHHHHHHHHHHHh--ccCCCCeEEEEC
Confidence 224679999999996543 221 234667776 3688999998887776655431 123578999999
Q ss_pred cCCCCCCCcccccccHHHHHHHHHHHHHHh
Q 015720 324 DDTLQGDVTSIDLTTKENFENLVRAGETLL 353 (402)
Q Consensus 324 ~~~~~~~~~~lD~~s~~~i~~L~~~a~~~l 353 (402)
++ +..+.++||+ +++|+.|++.+++|+
T Consensus 282 ~~-~~~~~~~ld~--~~~~~~l~~~t~~yl 308 (309)
T cd07216 282 VP-HGLEDVGLDE--YEKMEEIVSLTREYL 308 (309)
T ss_pred CC-CCCCCCChhh--hccHHHHHHHHHHhh
Confidence 85 4445578898 489999999999997
No 5
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=2e-53 Score=408.72 Aligned_cols=274 Identities=32% Similarity=0.568 Sum_probs=228.4
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
++|||||||||+||++++++|++||++. ++++++||+|+|||+|||+|++|+.+ ++++++.++|.+
T Consensus 1 ~~riLsLdGGG~RGi~~~~vL~~Le~~~-------~~~~~~fD~i~GTSaGaiia~~la~g-------~~~~e~~~~~~~ 66 (288)
T cd07213 1 KYRILSLDGGGVKGIVQLVLLKRLAEEF-------PSFLDQIDLFAGTSAGSLIALGLALG-------YSPRQVLKLYEE 66 (288)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHHHHhC-------cccccceeEEEEeCHHHHHHHHHHcC-------cCHHHHHHHHHH
Confidence 5799999999999999999999999983 25789999999999999999999987 689999999999
Q ss_pred hCCCcCCccccchhhhHHHHHHhhhcCCCChH-HHHHHHHHHcccccccccCCceEEeeecCCCCc--------ceeecC
Q 015720 97 HGPKIFPQLRGMLANSVVNLVRALMGTKYDGK-YLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQ--------PTIFSS 167 (402)
Q Consensus 97 ~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~-~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~--------p~~f~~ 167 (402)
....+|+... .. ..+.+..|... .++++++++|++.+|.|+.++++|+++|+.+++ |++|+|
T Consensus 67 ~~~~iF~~~~--~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~l~d~~~~~~i~a~~~~~~~~~~~~~~~~~~f~n 137 (288)
T cd07213 67 VGLKVFSKSS--AG-------GGAGNNQYFAAGFLKAFAEVFFGDLTLGDLKRKVLVPSFQLDSGKDDPNRRWKPKLFHN 137 (288)
T ss_pred hCccccCCCc--cc-------cccccccCCchHHHHHHHHHHhCcCCHhhcCCCEEEEEEeccCCCCCccccccceEeec
Confidence 9999998743 11 12234555554 899999999999999999999999999998886 699998
Q ss_pred CCCCCCCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCC
Q 015720 168 FQVAASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPL 247 (402)
Q Consensus 168 ~~~~~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~ 247 (402)
+... ...+..+|||++||||+|+||||+. .|+|||+.+|||+..|+.|+...... ..
T Consensus 138 ~~~~--~~~~~~l~d~~~ASsAaP~~F~p~~-------------~~iDGGv~~NnP~~~a~~~a~~~~~~--------~~ 194 (288)
T cd07213 138 FPGE--PDLDELLVDVCLRSSAAPTYFPSYQ-------------GYVDGGVFANNPSLCAIAQAIGEEGL--------NI 194 (288)
T ss_pred CCCC--CCccccHHHHHHHhccccccchhhh-------------ceecceeecCChHHHHHHHHHhcccc--------CC
Confidence 7642 2457899999999999999999982 49999999999999999998752110 11
Q ss_pred CCCceEEEEecCCCCCCCcccchh-hhcccccccccccCCCchHHHHHHhhhhhHHHHHHHHHHHhcCCCCcEEEeecCC
Q 015720 248 DYTRFLVISIGTGSKKSEHKYNAK-MASKWGIISWLYDNGDTPLLDCYGRAIGDMVDYHISVVFQALQSEDNYLRIEDDT 326 (402)
Q Consensus 248 ~~~~~~vlSiGTG~~~~~~~~~~~-~~~~~g~~~w~~~~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~~~~Y~Ri~~~~ 326 (402)
+.++++|||||||..... +... +..+||+++|+. ++++++++++++++++++++++ +++|+|||++
T Consensus 195 ~~~~i~vlSiGtG~~~~~--~~~~~~~~~~G~~~w~~-----~l~~~~~~~~~~~~~~~~~~~~-----~~~y~Ri~~~- 261 (288)
T cd07213 195 DLKDIVVLSLGTGRPPSY--LDGANGYGDWGLLQWLP-----DLLDLFMDAGVDAADFQCRQLL-----GERYFRLDPV- 261 (288)
T ss_pred CcccEEEEEecCCCCCCC--ccchhhccccceecccc-----hhHHHHHHHHHHHHHHHHHHHc-----cCcEEEeCCC-
Confidence 347899999999996543 3333 567899999984 6899999999999999998875 6899999986
Q ss_pred CCCCCcccccccHHHHHHHHHHHHHH
Q 015720 327 LQGDVTSIDLTTKENFENLVRAGETL 352 (402)
Q Consensus 327 ~~~~~~~lD~~s~~~i~~L~~~a~~~ 352 (402)
++ ..+|..++++|+.|+++|++.
T Consensus 262 l~---~~~~~~~~~~i~~l~~~~~~~ 284 (288)
T cd07213 262 LP---ANIDLDDNKQIEELVEIANTV 284 (288)
T ss_pred CC---cccCccCHHHHHHHHHHHHhc
Confidence 44 346777789999999999875
No 6
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=100.00 E-value=7.8e-52 Score=400.32 Aligned_cols=286 Identities=24% Similarity=0.318 Sum_probs=218.5
Q ss_pred EEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCC
Q 015720 20 ILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGP 99 (402)
Q Consensus 20 iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~ 99 (402)
||||||||+||+++++||++||+.++ .+++++||+|+|||+|||||++|+.+ ++++|+.++|.++++
T Consensus 1 ILsLDGGG~RGl~~i~vL~~le~~~g------~~i~~~fD~i~GTStGgiIA~~la~g-------~s~~e~~~~y~~~~~ 67 (312)
T cd07212 1 LLCLDGGGIRGLVLIQMLIAIEKALG------RPIRELFDWIAGTSTGGILALALLHG-------KSLREARRLYLRMKD 67 (312)
T ss_pred CEEECCcHHHHHHHHHHHHHHHHHhC------CCchhhccEEEeeChHHHHHHHHHcC-------CCHHHHHHHHHHhhh
Confidence 69999999999999999999999864 37899999999999999999999986 789999999999998
Q ss_pred CcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccc-cccccCCceEEeeecCCC---CcceeecCCCCCCCC-
Q 015720 100 KIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDT-KLHQTLTNVAIPTFDIKK---LQPTIFSSFQVAASP- 174 (402)
Q Consensus 100 ~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~-~l~d~~~~l~V~a~d~~~---~~p~~f~~~~~~~~~- 174 (402)
++|.+. +.|++++|+++|+++||+. ++.|...+.++++++..+ .++++|+||..+...
T Consensus 68 ~iF~~~-----------------~~y~~~~le~~L~~~~g~~~~l~d~~~p~~~v~~~~~~~~~~~~~~f~ny~~~~~~~ 130 (312)
T cd07212 68 RVFDGS-----------------RPYNSEPLEEFLKREFGEDTKMTDVKYPRLMVTGVLADRQPVQLHLFRNYDPPEDVE 130 (312)
T ss_pred hhCCCC-----------------CCCCChHHHHHHHHHHCcCccccccCCCeEEEEeEeccCCCcCceeeecCCCCCCch
Confidence 888652 5689999999999999997 788887765555555544 445999999865322
Q ss_pred -------------CCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCC
Q 015720 175 -------------DLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDF 241 (402)
Q Consensus 175 -------------~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~ 241 (402)
..+..+|+|+|||||+|+||+|+. .|+|||+.+|||++.|+.|+.+. +.. .
T Consensus 131 ~~~~~~~~~~~~~~~~~~l~~a~rASsAaP~~F~p~~-------------~~vDGGv~~NnP~~~a~~Ea~~~-~~~--~ 194 (312)
T cd07212 131 EPEKNANFLPPTDPAEQLLWRAARSSGAAPTYFRPMG-------------RFLDGGLIANNPTLDAMTEIHEY-NKT--L 194 (312)
T ss_pred hccccccccccCCcccccHHHHHHhhccccccccccc-------------ceecCceeccChHHHHHHHHHHh-ccc--c
Confidence 246899999999999999999981 49999999999999999999653 110 0
Q ss_pred CCC-CCCCCCce-EEEEecCCCCCCCccc---chhhhccccccccccc-CCCchHHHHHHhhhhhHHHHHHHHHHHhcC-
Q 015720 242 CPI-NPLDYTRF-LVISIGTGSKKSEHKY---NAKMASKWGIISWLYD-NGDTPLLDCYGRAIGDMVDYHISVVFQALQ- 314 (402)
Q Consensus 242 ~p~-~~~~~~~~-~vlSiGTG~~~~~~~~---~~~~~~~~g~~~w~~~-~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~- 314 (402)
++. ......++ ||||||||..+... + +..+.. |.++|+.. ....++.++++++.++..+.|+...-...+
T Consensus 195 ~~~~~~~~~~~i~~vvSiGTG~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~t~t~~~~~~~~~~~~~~ 271 (312)
T cd07212 195 KSKGRKNKVKKIGCVVSLGTGIIPQTP-VNTVDVFRPS--NPWELAKTVFGAKNLGKMVVDQCTASDGAPVDRARAWCES 271 (312)
T ss_pred cccccCCCCCcccEEEEeCCCCCCCcc-cCCcccccCc--chHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHh
Confidence 000 00012344 99999999975421 2 111111 45666521 112468889998887776666544211111
Q ss_pred CCCcEEEeecCCCCCCCcccccccHHHHHHHHHHHHHHhccc
Q 015720 315 SEDNYLRIEDDTLQGDVTSIDLTTKENFENLVRAGETLLKKP 356 (402)
Q Consensus 315 ~~~~Y~Ri~~~~~~~~~~~lD~~s~~~i~~L~~~a~~~l~~~ 356 (402)
.+.+||||||+ +. +..+||++++++|.+|...|+.|++++
T Consensus 272 ~~~~Y~Rfn~~-l~-~~~~lde~~~~~l~~l~~~~~~yi~~~ 311 (312)
T cd07212 272 IGIPYFRFSPP-LS-KDIMLDETDDEDLVNMLWDTEVYIYTH 311 (312)
T ss_pred cCCceEEeCCc-cC-CCcCCCcCCHHHHHHHHHHHHHHHHhc
Confidence 26799999996 44 678999999999999999999999765
No 7
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=5.7e-51 Score=398.05 Aligned_cols=264 Identities=27% Similarity=0.379 Sum_probs=209.4
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcC-CCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDG-EDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g-~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
+|||||||||+||+++++||++||+.+++..+ ++.+++++||+|+|||||||||++|+.+ ++++|+.++|.+
T Consensus 1 ~rILsLDGGGiRGi~~~gvL~~LE~~l~~~~~~p~~~l~d~FDlIaGTStGgIIAa~la~g-------~s~~ei~~~y~~ 73 (344)
T cd07217 1 KKILALDGGGIRGLLSVEILGRIEKDLRTHLDDPEFRLGDYFDFVGGTSTGSIIAACIALG-------MSVTDLLSFYTL 73 (344)
T ss_pred CEEEEEcCCHHHHHHHHHHHHHHHHHhhhccCCccccccccccEEEEecHHHHHHHHHHcC-------CCHHHHHHHHHh
Confidence 48999999999999999999999999876433 5568899999999999999999999987 799999999999
Q ss_pred hCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccc--cCCceEEeeecCCCCcceeecCCCCCC--
Q 015720 97 HGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQ--TLTNVAIPTFDIKKLQPTIFSSFQVAA-- 172 (402)
Q Consensus 97 ~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d--~~~~l~V~a~d~~~~~p~~f~~~~~~~-- 172 (402)
.+.++|...+ +.. .+......+.|+.+.|+++|+++||+.+|.| ..++++|+++|+.+++|++|+++....
T Consensus 74 ~~~~iF~~~~-~~~----~l~~~~~~~~y~~~~L~~~L~~~fg~~~l~d~~~~~~l~i~a~dl~tg~p~~f~~~~~~~~~ 148 (344)
T cd07217 74 NGVNMFDKAW-LAQ----RLFLNKLYNQYDPTNLGKKLNTVFPETTLGDDTLRTLLMIVTRNATTGSPWPVCNNPEAKYN 148 (344)
T ss_pred hhhhhcCchh-hhh----hccccccccccCcHHHHHHHHHHcCceeecccccCceEEEEEEecCCCCeeEeecCchhhcc
Confidence 9999998753 111 0000111245999999999999999999987 446899999999999999999864311
Q ss_pred -----CCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeecccc-CCchHHHHHHHHHHHhhcCCCCCCCCC
Q 015720 173 -----SPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVA-ANNPTLVAISEMTKHILKNPDFCPINP 246 (402)
Q Consensus 173 -----~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~-~NnP~~~al~ea~~~~~~~~~~~p~~~ 246 (402)
....++++|||+|||||+|+||||+.+...+ | .++.||||||+ +|||+++|+.||...... -.||
T Consensus 149 ~~~~~~~~~~~~L~da~rASsAaPt~FpP~~i~~~~--~--~~~~lVDGGv~aaNNP~l~A~~ea~~~~~~--~~~~--- 219 (344)
T cd07217 149 DSDRSDCNLDLPLWQLVRASTAAPTFFPPEVVSIAP--G--TAFVFVDGGVTTYNNPAFQAFLMATAKPYK--LNWE--- 219 (344)
T ss_pred cccccCcccCCcHHHHHHHHccCccccCceEEEecC--C--ceEEEECCccccccCHHHHHHHHHHHhhhc--ccCC---
Confidence 1345689999999999999999999875321 2 24589999999 699999999998643110 0122
Q ss_pred CCCCceEEEEecCCCCCCCcccchhhhcccccccccccCCCchHHHHHHhhhhhHHHHHHHHH
Q 015720 247 LDYTRFLVISIGTGSKKSEHKYNAKMASKWGIISWLYDNGDTPLLDCYGRAIGDMVDYHISVV 309 (402)
Q Consensus 247 ~~~~~~~vlSiGTG~~~~~~~~~~~~~~~~g~~~w~~~~~~~~l~~~~~~a~~~~~~~~~~~l 309 (402)
.+.++++|||||||..+.. +...+..+||+++|+ .++++++|++++..++++++..
T Consensus 220 ~~~~~i~vlSiGTG~~~~~--~~~~~~~~~g~~~w~-----~~l~~~lm~~~~~~~~~~~~~~ 275 (344)
T cd07217 220 VGADNLLLVSVGTGFAPEA--RPDLKAADMWALDHA-----KYIPSALMNAANAGQDMVCRVL 275 (344)
T ss_pred CCCCcEEEEEECCCCCCCC--CccccccccChhhhH-----HHHHHHHhcchhhHHHHHHHHc
Confidence 2347899999999996543 445567889999997 4799999999887777776553
No 8
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=100.00 E-value=1.8e-49 Score=376.04 Aligned_cols=256 Identities=45% Similarity=0.720 Sum_probs=215.0
Q ss_pred EEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCC
Q 015720 20 ILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGP 99 (402)
Q Consensus 20 iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~ 99 (402)
||||||||+||++++++|++||++++. +.+++++||+|+|||||||+|++|+.+. ++++++.++|.+.+.
T Consensus 1 iLsldGGG~rG~~~~~~L~~le~~~~~----~~~~~~~fd~i~GtS~G~iia~~l~~~~------~~~~~~~~~~~~~~~ 70 (258)
T cd07199 1 ILSLDGGGIRGIIPAEILAELEKRLGK----PSRIADLFDLIAGTSTGGIIALGLALGR------YSAEELVELYEELGR 70 (258)
T ss_pred CEEECCchHhHHHHHHHHHHHHHHhCC----CCchhhccceeeeccHHHHHHHHHhcCC------CCHHHHHHHHHHHhH
Confidence 699999999999999999999999753 1148999999999999999999999873 789999999988765
Q ss_pred CcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCC-CCCCCc
Q 015720 100 KIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAA-SPDLDA 178 (402)
Q Consensus 100 ~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~-~~~~~~ 178 (402)
++|+ +++|++||+++++|++|++|.... .+..+.
T Consensus 71 ~if~---------------------------------------------~~~i~a~~~~~~~~~~f~~~~~~~~~~~~~~ 105 (258)
T cd07199 71 KIFP---------------------------------------------RVLVTAYDLSTGKPVVFSNYDAEEPDDDDDF 105 (258)
T ss_pred hhcc---------------------------------------------CeEEEEEEcCCCCeEEEECCCCcccCCcCCc
Confidence 4431 799999999999999999998653 445678
Q ss_pred hHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCceEEEEec
Q 015720 179 QLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPLDYTRFLVISIG 258 (402)
Q Consensus 179 ~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~~~~~~~vlSiG 258 (402)
++|||++||||+|+||||+.+... + .+..|+|||+.+|||+..|+.||.+. |. .+.++++|||||
T Consensus 106 ~l~d~~~ASsAaP~~f~p~~i~~~---~--~~~~~vDGGv~~NnP~~~a~~ea~~~-~~---------~~~~~~~vlSiG 170 (258)
T cd07199 106 KLWDVARATSAAPTYFPPAVIESG---G--DEGAFVDGGVAANNPALLALAEALRL-LA---------PDKDDILVLSLG 170 (258)
T ss_pred cHHHHHHHHhcchhccCcEEeccC---C--CeeEEecCccccCChHHHHHHHHHHh-cC---------CCCCceEEEEec
Confidence 999999999999999999998532 1 13479999999999999999999764 21 134789999999
Q ss_pred CCCCCCCcccchhhhcccccccccccCCCchHHHHHHhhhhhHHHHHHHHHHHhcCCCCcEEEeecCCCCCCCccccccc
Q 015720 259 TGSKKSEHKYNAKMASKWGIISWLYDNGDTPLLDCYGRAIGDMVDYHISVVFQALQSEDNYLRIEDDTLQGDVTSIDLTT 338 (402)
Q Consensus 259 TG~~~~~~~~~~~~~~~~g~~~w~~~~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~~~~Y~Ri~~~~~~~~~~~lD~~s 338 (402)
||..+.. ........|+.++|. .+++.++++++.++++++++.+++....+++|+|||++ ++.....+|+++
T Consensus 171 TG~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~~-~~~~~~~~d~~~ 242 (258)
T cd07199 171 TGTSPSS--SSSKKASRWGGLGWG-----RPLLDILMDAQSDGVDQWLDLLFGSLDSKDNYLRINPP-LPGPIPALDDAS 242 (258)
T ss_pred CCCCCCC--cCHHHhhccCccccH-----HHHHHHHHHhhHHHHHHHHHHHhhcccCCCeEEEEcCC-CCCCcccchhCC
Confidence 9996544 444455678888887 46889999999999999998887645568999999986 666666789999
Q ss_pred HHHHHHHHHHHHHHh
Q 015720 339 KENFENLVRAGETLL 353 (402)
Q Consensus 339 ~~~i~~L~~~a~~~l 353 (402)
+++++.|...+++++
T Consensus 243 ~~~~~~l~~~~~~~~ 257 (258)
T cd07199 243 EANLLALDSAAFELI 257 (258)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999986
No 9
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-50 Score=390.67 Aligned_cols=308 Identities=27% Similarity=0.378 Sum_probs=238.9
Q ss_pred CCCCCCceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHH
Q 015720 11 PPTYANLITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDI 90 (402)
Q Consensus 11 pp~~~~~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~ 90 (402)
.|.+++++||||+||||+||+..+.+|+.||+--++ ++++.||+|||+|||||+|++|+... |+.+||
T Consensus 410 ~~vkg~G~rILSiDGGGtrG~~~lqiL~kieklsgK------pIheLFD~ICGvSTG~ilA~~Lg~k~------m~l~eC 477 (763)
T KOG4231|consen 410 RQVKGQGLRILSIDGGGTRGLATLQILKKIEKLSGK------PIHELFDLICGVSTGGILAIALGVKL------MTLEEC 477 (763)
T ss_pred cccCCCceEEEEecCCCccchhHHHHHHHHHHhcCC------cHHHHHHHHhccCchHHHHHHHHhcC------ccHHHH
Confidence 477899999999999999999999999999986543 78999999999999999999999764 999999
Q ss_pred HHHHHHhCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHccccc-cccc-----CCceEEeeecCC---CCc
Q 015720 91 VPFYIRHGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTK-LHQT-----LTNVAIPTFDIK---KLQ 161 (402)
Q Consensus 91 ~~~y~~~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~-l~d~-----~~~l~V~a~d~~---~~~ 161 (402)
.++|.++++.+|++.- +.+ +.-..|.+++|++..++.+|++..|+.. |-.+ ..+|+|+++=++ +-+
T Consensus 478 eEiY~~lgk~vFsq~v-~~g----~~~~sw~Hs~y~~n~we~iLKem~ged~~mi~tsr~~~~PkvavVStiVn~~pT~q 552 (763)
T KOG4231|consen 478 EEIYKNLGKLVFSQSV-PKG----NEAASWIHSKYSANEWERILKEMCGEDGDMIITSRVKNVPKVAVVSTIVNVMPTAQ 552 (763)
T ss_pred HHHHHHHhHHHhhccc-ccc----chhheehhhhcchHHHHHHHHHHhhhhhhHHHhhccCCCCceeehhhhhhcCCCcc
Confidence 9999999999998864 222 2223456799999999999999998542 3322 235777766443 578
Q ss_pred ceeecCCCCCCCC------CCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHh
Q 015720 162 PTIFSSFQVAASP------DLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHI 235 (402)
Q Consensus 162 p~~f~~~~~~~~~------~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~ 235 (402)
|++|+||.++... ..+..+|+|+|||+|||.||..+.+++ +.+.|||+.+|||+..|++|| +++
T Consensus 553 pfIFRNY~hp~G~~Shy~Ggc~h~~WqAIrASsAAP~Yf~e~~lgn---------~l~QDGgi~aNNPta~A~hEa-klL 622 (763)
T KOG4231|consen 553 PFIFRNYQHPVGTQSHYMGGCKHQVWQAIRASSAAPYYFDEFSLGN---------YLWQDGGIVANNPTAFAIHEA-KLL 622 (763)
T ss_pred ceeeeccCCCCCcchhhcccchHHHHHHHHhcccCCcchhhhcccc---------ceeccCcEeecCccHHHhhhh-hcc
Confidence 9999999987432 456889999999999999999998864 379999999999999999998 666
Q ss_pred hcCCCCCCCCCCCCCceEEEEecCCCCCCCcccchhhhcccccccccccCCCchHHHHHHhhhhhHHHHHHHHHHHhcCC
Q 015720 236 LKNPDFCPINPLDYTRFLVISIGTGSKKSEHKYNAKMASKWGIISWLYDNGDTPLLDCYGRAIGDMVDYHISVVFQALQS 315 (402)
Q Consensus 236 ~~~~~~~p~~~~~~~~~~vlSiGTG~~~~~~~~~~~~~~~~g~~~w~~~~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~ 315 (402)
||+.++ .|+||||+|..+... .+ | .|........|+++.-. .+|..+.|+ .+..+.+
T Consensus 623 ------WPD~~i----~C~VSiGsGr~~t~V-------r~-~--tv~yts~~~kL~~~i~S-atdtEevh~--~l~~mLP 679 (763)
T KOG4231|consen 623 ------WPDTKI----DCLVSIGSGRVPTRV-------RK-G--TVRYTSTGQKLIESICS-ATDTEEVHS--TLLPMLP 679 (763)
T ss_pred ------CCCCCc----cEEEEecCCcccccc-------cC-C--ceEEecHHHHHHHHHhc-ccchHHHHH--hhhccCC
Confidence 475544 599999999965431 11 1 12111112345555443 355555553 2345568
Q ss_pred CCcEEEeecCCCCCCCcccccccHHHHHHHHHHHHHHhcccccccccCCCccccccCCCCCchHHHHHHHHHHHHHH
Q 015720 316 EDNYLRIEDDTLQGDVTSIDLTTKENFENLVRAGETLLKKPVSRINLDTGLYEPIENGSAGTNEEALKRFAKMLSDE 392 (402)
Q Consensus 316 ~~~Y~Ri~~~~~~~~~~~lD~~s~~~i~~L~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~a~~l~~~ 392 (402)
+..||||||. ......||.++++.++.|...+++|++ .|..+++..|+.|..+
T Consensus 680 e~~YfRFNPv--m~~~~~LDE~d~e~l~ql~~~~e~yI~----------------------rN~qk~k~vaerL~l~ 732 (763)
T KOG4231|consen 680 EIQYFRFNPV--MDRCMELDETDPEILLQLEAAIEEYIQ----------------------RNPQKFKNVAERLTLP 732 (763)
T ss_pred chheEecchh--hhcccCcCccCHHHHHHHHHHHHHHHH----------------------hChHHHHHHHHHhcCC
Confidence 9999999984 556699999999999999999999984 5666777777766654
No 10
>COG3621 Patatin [General function prediction only]
Probab=100.00 E-value=1.7e-39 Score=301.21 Aligned_cols=194 Identities=36% Similarity=0.583 Sum_probs=155.8
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
++|||+|||||+||.+++.+|+.||+. .|+ ++|++||+|+|||+|||+|++|+.+. +..|..++|..
T Consensus 8 k~rIlsldGGGvrG~i~lE~lr~ieqi----qGk--kl~e~FDl~~GTSiGgilal~La~~k-------s~~e~~qlF~~ 74 (394)
T COG3621 8 KYRILSLDGGGVRGAILLEKLRIIEQI----QGK--KLCEYFDLIGGTSIGGILALGLALGK-------SPRELKQLFSA 74 (394)
T ss_pred ceeEEEecCCccccHHHHHHHHHHHHH----hCC--cceeeEeeecCccHHHHHHHHHhcCC-------CCchHHHHHHH
Confidence 689999999999999999999888874 243 78999999999999999999999984 56777777777
Q ss_pred hCCCcCCccc--cchhh-hHHHH-HHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCc-ceeecC-CCC
Q 015720 97 HGPKIFPQLR--GMLAN-SVVNL-VRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQ-PTIFSS-FQV 170 (402)
Q Consensus 97 ~~~~iF~~~~--~~~~~-~~~~~-~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~-p~~f~~-~~~ 170 (402)
....+|+... .++.- .+++. ...+++++|++++|.++|+.+.+|.++.|+.++|+|+.+++.+++ |.+|.+ ++.
T Consensus 75 q~~q~f~ee~~~~~fpv~tFrq~l~~a~~~pkys~~pLiK~lk~~~~D~tlkDL~~~Vvv~~~~l~~~knp~~t~~~~~~ 154 (394)
T COG3621 75 QQAQIFPEEMKHRIFPVGTFRQLLSYALFSPKYSPQPLIKLLKFVCKDYTLKDLIGRVVVPGYDLNNQKNPLFTFSTHHA 154 (394)
T ss_pred hhhhhccHhhccCCCcchhHhhhhhhhhcCCcCCchhHHHHHHHhccccchhhhccceEEEeeecccccCCceeecccCc
Confidence 6666665432 11110 11111 123689999999999999988899999999999999999999988 655544 333
Q ss_pred CCCCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHH
Q 015720 171 AASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLV 226 (402)
Q Consensus 171 ~~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~ 226 (402)
....+.++.|||++.||+|||+||||+++.+.+ +++.+.||||||++|||++.
T Consensus 155 ~~~ry~~~~LsDii~~stAAPtyFp~h~~~~i~---~~k~~~~iDGGv~ANnPsla 207 (394)
T COG3621 155 RPSRYNNYKLSDIILASTAAPTYFPPHHFENIT---NTKYHPIIDGGVVANNPSLA 207 (394)
T ss_pred cccccccchHHHHHHhcccCCcccCcccccccc---cccceeeecceeeecChhHH
Confidence 334478899999999999999999999998773 23456799999999999976
No 11
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=100.00 E-value=5.6e-33 Score=267.79 Aligned_cols=269 Identities=17% Similarity=0.210 Sum_probs=184.9
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
...|+|+|||+||++++|||++||++ ...||+|+|||+||++|++++.+ ++++++.+...+.
T Consensus 15 ~~gLvL~GGG~RG~ahiGvL~aLee~-----------gi~~d~v~GtSaGAi~ga~ya~g-------~~~~~~~~~~~~~ 76 (306)
T cd07225 15 SIALVLGGGGARGCAHIGVIKALEEA-----------GIPVDMVGGTSIGAFIGALYAEE-------RNISRMKQRAREW 76 (306)
T ss_pred CEEEEECChHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHHH
Confidence 36799999999999999999999997 23599999999999999999998 5677776655443
Q ss_pred CCCcCCccccchhhhHHHHH--HhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLV--RALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPD 175 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~--~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~ 175 (402)
... +. .++. .++ .....+.|+.+.+++.|+++|++.++.|+..++.+++||+.+|++++|+.
T Consensus 77 ~~~-~~---~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~edl~~p~~~vatdl~tg~~~~~~~-------- 140 (306)
T cd07225 77 AKD-MT---SIWK----KLLDLTYPITSMFSGAAFNRSIHSIFGDKQIEDLWLPYFTITTDITASAMRVHTD-------- 140 (306)
T ss_pred HHH-hH---HHHH----HHhcccccccccCChHHHHHHHHHHhCCCCHHHcCCCeEEEeeecCCCCEEEecC--------
Confidence 111 00 0111 111 11245779999999999999999999999999999999999999999965
Q ss_pred CCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCceEEE
Q 015720 176 LDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPLDYTRFLVI 255 (402)
Q Consensus 176 ~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~~~~~~~vl 255 (402)
..+++|++||||+|++|||+.+.. +| ..|+|||+.+|+|+..|+.. +.+.+++|
T Consensus 141 --g~l~~avrAS~siP~~f~Pv~~~~---~g----~~~vDGGv~~n~Pv~~a~~~-----------------g~~~ii~V 194 (306)
T cd07225 141 --GSLWRYVRASMSLSGYLPPLCDPK---DG----HLLMDGGYINNLPADVARSM-----------------GAKTVIAI 194 (306)
T ss_pred --CCHHHHHHHHhcCCeeccceEeCC---CC----eEEEeccccCcchHHHHHHC-----------------CcCEEEEE
Confidence 369999999999999999996421 13 47999999999999877531 23679999
Q ss_pred EecCCCCCCCcccchhhhccccccccccc-----CCCchHHHHHHhhhhhHHHHHHHHHHHhcCCCCcEEEeecCCCCCC
Q 015720 256 SIGTGSKKSEHKYNAKMASKWGIISWLYD-----NGDTPLLDCYGRAIGDMVDYHISVVFQALQSEDNYLRIEDDTLQGD 330 (402)
Q Consensus 256 SiGTG~~~~~~~~~~~~~~~~g~~~w~~~-----~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~~~~Y~Ri~~~~~~~~ 330 (402)
+++|+.......+ .++..+|+++.+..+ ...+.+++++...........+.. +...+.-+-|.|+ +
T Consensus 195 ~v~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~p~~~~i~~~~~~~~~~~~~~~----l~~~~~~~~i~P~-v--- 265 (306)
T cd07225 195 DVGSQDETDLTNY-GDALSGWWLLWKRWNPLAEKVKVPNMAEIQSRLAYVSCVRQLEE----VKSSDYCEYLRPP-I--- 265 (306)
T ss_pred ECCCCcccccccc-cccccchhhHHhhccccccccCCCCHHHHHHHHHHHHHHHHHHH----HhccCCeEEEecC-c---
Confidence 9999875422112 123334544433322 123456675333211111111111 1112332235553 2
Q ss_pred CcccccccHHHHHHHHHHHHHHhccc
Q 015720 331 VTSIDLTTKENFENLVRAGETLLKKP 356 (402)
Q Consensus 331 ~~~lD~~s~~~i~~L~~~a~~~l~~~ 356 (402)
..+...+.+.++++.++|.+...+.
T Consensus 266 -~~~~~~d~~kl~~~~~~Gy~~a~~~ 290 (306)
T cd07225 266 -DKYKTLDFGKFDEICEVGYQHGKTV 290 (306)
T ss_pred -cCCCCCChHHHHHHHHHHHHHHHHH
Confidence 2344456688999999998876543
No 12
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=100.00 E-value=5.5e-33 Score=248.08 Aligned_cols=163 Identities=23% Similarity=0.314 Sum_probs=138.0
Q ss_pred EEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCC
Q 015720 20 ILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGP 99 (402)
Q Consensus 20 iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~ 99 (402)
.|+|+|||+||++++|+|++|+++ ...||+|+|||+||++|++++.+ ++.+++.+.|.+...
T Consensus 2 ~Lvl~GGG~rG~~~~Gvl~~L~~~-----------~~~~d~i~GtSaGal~a~~~a~g-------~~~~~~~~~~~~~~~ 63 (175)
T cd07205 2 GLALSGGGARGLAHIGVLKALEEA-----------GIPIDIVSGTSAGAIVGALYAAG-------YSPEEIEERAKLRST 63 (175)
T ss_pred eEEEeChhHHHHHHHHHHHHHHHc-----------CCCeeEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhhcc
Confidence 599999999999999999999986 13599999999999999999988 578999988876544
Q ss_pred CcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCch
Q 015720 100 KIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDAQ 179 (402)
Q Consensus 100 ~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~~ 179 (402)
..+.... + .....+.|+.+.+++.+++.|+..++.++.+++.|+++|++++++++|++ ..
T Consensus 64 ~~~~~~~-~---------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~a~~l~~g~~~~f~~----------~~ 123 (175)
T cd07205 64 DLKALSD-L---------TIPTAGLLRGDKFLELLDEYFGDRDIEDLWIPFFIVATDLTSGKLVVFRS----------GS 123 (175)
T ss_pred chhhhhc-c---------ccccccccChHHHHHHHHHHcCCCcHHHCCCCEEEEEEECCCCCEEEEcC----------CC
Confidence 4332211 0 01135679999999999999999999999999999999999999999975 35
Q ss_pred HHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHH
Q 015720 180 LADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAIS 229 (402)
Q Consensus 180 l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ 229 (402)
+++|++||||+|+||||+++++ ..|+|||+.+|+|+..|+.
T Consensus 124 l~~av~AS~a~P~~f~pv~~~g---------~~~~DGG~~~n~P~~~a~~ 164 (175)
T cd07205 124 LVRAVRASMSIPGIFPPVKIDG---------QLLVDGGVLNNLPVDVLRE 164 (175)
T ss_pred HHHHHHHHcccccccCCEEECC---------EEEEeccCcCCccHHHHHH
Confidence 9999999999999999999863 3799999999999977764
No 13
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=100.00 E-value=3.1e-32 Score=247.11 Aligned_cols=171 Identities=25% Similarity=0.303 Sum_probs=137.3
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|||+|||+||++++|||++||++ ...||+|+|||+||++|++++++ ++.+++.++|.....+
T Consensus 2 Lvl~GGG~rG~~~~Gvl~~L~e~-----------~~~~d~i~GtSaGai~aa~~a~g-------~~~~~~~~~~~~~~~~ 63 (194)
T cd07207 2 LVFEGGGAKGIAYIGALKALEEA-----------GILKKRVAGTSAGAITAALLALG-------YSAADIKDILKETDFA 63 (194)
T ss_pred eEEcCchHHHHHHHHHHHHHHHc-----------CCCcceEEEECHHHHHHHHHHcC-------CCHHHHHHHHHhCCHH
Confidence 89999999999999999999986 23469999999999999999987 6789999999877655
Q ss_pred cCCccccchhhhHHHHHHhh-hcCCCChHHHHHHHHHHcccccc------------cccCCceEEeeecCCCCcceeecC
Q 015720 101 IFPQLRGMLANSVVNLVRAL-MGTKYDGKYLHKVIKENLKDTKL------------HQTLTNVAIPTFDIKKLQPTIFSS 167 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l-~~~~y~~~~l~~~l~~~~~~~~l------------~d~~~~l~V~a~d~~~~~p~~f~~ 167 (402)
.|.... .. .+..+...+ .++.|+.+.|++.|++.+++..+ .+..+++.|++||+.++++++|+.
T Consensus 64 ~~~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~I~atd~~tg~~~~f~~ 140 (194)
T cd07207 64 KLLDSP--VG-LLFLLPSLFKEGGLYKGDALEEWLRELLKEKTGNSFATSLLRDLDDDLGKDLKVVATDLTTGALVVFSA 140 (194)
T ss_pred HHhccc--hh-hhHHHHHHHhhcCCccHHHHHHHHHHHHHhccCCcccchhhhhhccccCCcEEEEEEECCCCCEEEecC
Confidence 553221 00 111111222 35789999999999999987655 557789999999999999999986
Q ss_pred CCCCCCCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHH
Q 015720 168 FQVAASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTL 225 (402)
Q Consensus 168 ~~~~~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~ 225 (402)
... .+..+|+|++||||+|++|||+.++. | ..|+|||+.+|||+.
T Consensus 141 ~~~-----~~~~l~~av~AS~AiP~~f~pv~i~~----g----~~~vDGG~~~n~Pv~ 185 (194)
T cd07207 141 ETT-----PDMPVAKAVRASMSIPFVFKPVRLAK----G----DVYVDGGVLDNYPVW 185 (194)
T ss_pred CCC-----CcccHHHHHHHHcCCCcccccEEeCC----C----eEEEeCccccCCCch
Confidence 432 35679999999999999999999961 2 379999999999985
No 14
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=100.00 E-value=4.4e-32 Score=273.25 Aligned_cols=389 Identities=43% Similarity=0.624 Sum_probs=307.7
Q ss_pred CCCCCCCCceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCC--CCCCCCccE-EEecchHHHHHHHHhCCCCCCCccC
Q 015720 9 NQPPTYANLITILSIDGGGIRGIIPGVILAYLESQLQELDGED--ARLADYFDV-IAGTSTGGLLTAMLTAPSEQNRPMY 85 (402)
Q Consensus 9 ~~pp~~~~~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~--~~~~~~fDl-i~GTStG~iia~~l~~~~~~~~~~~ 85 (402)
.-||..+...++|+|||||+||+++..++..++.+++.++|.. .++.++||+ ++|+++|+++++++-.....++|++
T Consensus 26 ~~~~~~~~~~~~lsld~gg~~gi~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~~~g~~~~gl~~aml~a~~~~~~P~~ 105 (503)
T KOG0513|consen 26 NYDPSYGGLVTILSLDGGGSRGINQGVSLAYLELRLQNIDGDPSAARLADYFDVSIAGTNTGGLITAMLFAPNDCGRPRF 105 (503)
T ss_pred cCCccccccceEEEEcCccceehhhhhhhcccHHHHHhccCChHhhHhhhccCceeeccCCchhhhhhhhccccccCccc
Confidence 3566666789999999999999999999999999999999954 789999999 9999999999999998888889999
Q ss_pred CHhHH-HHHHHHhCCCcCCccc---cchhhhHHHHHHhhhcCCCCh------HHHHHHHHHHcccccccccCCc----eE
Q 015720 86 AAKDI-VPFYIRHGPKIFPQLR---GMLANSVVNLVRALMGTKYDG------KYLHKVIKENLKDTKLHQTLTN----VA 151 (402)
Q Consensus 86 s~~e~-~~~y~~~~~~iF~~~~---~~~~~~~~~~~~~l~~~~y~~------~~l~~~l~~~~~~~~l~d~~~~----l~ 151 (402)
.+.++ ..++.+.++.+|.+.. ..++.+...+.....+.+|+. .......++.+|+.+|.++.++ ++
T Consensus 106 ~a~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~~~~ 185 (503)
T KOG0513|consen 106 GATDILWKFNLEKAPKLLEKFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENLLVV 185 (503)
T ss_pred cccchhhhhhhcCCCccccccccccccccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCcceE
Confidence 99999 8999999988887642 011100000111123455655 5555566777999999999988 99
Q ss_pred EeeecCCCCcceeecCCCCCCC---CCCCchHHHHHHhh--cCCCCCCCc-eeecCCCCCCCcceeeeeecc-ccCCchH
Q 015720 152 IPTFDIKKLQPTIFSSFQVAAS---PDLDAQLADIAIGT--SAAPTYFPA-HYFKNPDEHGTLKEFNLIDGG-VAANNPT 224 (402)
Q Consensus 152 V~a~d~~~~~p~~f~~~~~~~~---~~~~~~l~da~~AS--sAaP~yFpp-~~i~~~~~~G~~~~~~~iDGG-v~~NnP~ 224 (402)
|++++++...|.+|+.|..... +..+..+++.|+++ +|+|++|+| +.+...|..|......++||| +..|||.
T Consensus 186 i~~ldl~~~~P~lf~~~~~~~~~~v~~~~~~~~~~c~~t~~sa~~~~f~~~~~~~~~Dg~~~~~~~~~~~~g~~~m~n~t 265 (503)
T KOG0513|consen 186 IPCLDLKSLTPNLFSIYDALGTKIVPLLDFKAIDICIDTYGSAAPTIFPPILGFPSEDGQGIKTVCVLLDGGDIAMNNPT 265 (503)
T ss_pred EEeeccCcCCceeeeeeccccccchhhhhhhhhhhhhccccccCccccCcccccccccccccceeeEEecchhhhccCch
Confidence 9999999999999999887655 56677889999999 999999999 777777644433556799999 9999999
Q ss_pred HHHHHHHHHHhhcCC---CCCCCCCCCCCceEEEEecCCCCCCCcccchhhh---cccccccccc--cCCCchHHHHHHh
Q 015720 225 LVAISEMTKHILKNP---DFCPINPLDYTRFLVISIGTGSKKSEHKYNAKMA---SKWGIISWLY--DNGDTPLLDCYGR 296 (402)
Q Consensus 225 ~~al~ea~~~~~~~~---~~~p~~~~~~~~~~vlSiGTG~~~~~~~~~~~~~---~~~g~~~w~~--~~~~~~l~~~~~~ 296 (402)
..++.+........+ ..++ .+...++.+|+|+|+|.......+..++. ..|+++.|+. +.+..++.++...
T Consensus 266 ~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~lv~~~G~G~~~~q~l~~~e~~~~~a~~~~f~w~~gtstg~~~~~~i~~~ 344 (503)
T KOG0513|consen 266 LHAITHVTANKRPFPPLLGLFR-YRLRVDDNLVLSDGGGIPIIQVLYWIEKRCGTAAWGYFDWFNGTSTGSTIMADIALD 344 (503)
T ss_pred HhhhhhhhhhcccCCccccccc-ccccccceEEEecCCCChhHHHHHhHHHhcccccccccccccccCcCceeehhhhhc
Confidence 999887654321111 1111 33446778999999999734445666666 7899999997 4566789999999
Q ss_pred hhhhHHH----HHHHHHHHhcCCCCcEEEee--cCCCCCCCccccccc-HHHHHHHHH--HHHHHhcccccccccCCCcc
Q 015720 297 AIGDMVD----YHISVVFQALQSEDNYLRIE--DDTLQGDVTSIDLTT-KENFENLVR--AGETLLKKPVSRINLDTGLY 367 (402)
Q Consensus 297 a~~~~~~----~~~~~l~~~~~~~~~Y~Ri~--~~~~~~~~~~lD~~s-~~~i~~L~~--~a~~~l~~~~~~~~~~~~~~ 367 (402)
++.++++ ++....|....+..+|.||+ -....+....+|... ..++..+.. .++.++..+..+++.++++
T Consensus 345 ~s~d~v~~~y~~~k~~~F~~~r~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~~i~~~~- 423 (503)
T KOG0513|consen 345 GSSDEVDRMYLQMKDVVFDGLRSEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRHNINGGK- 423 (503)
T ss_pred ccHHHHHHHHHHHhHHhhhcccCCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhcccccccccc-
Confidence 9999999 77778888888889999998 323344455667655 678999999 9999999999999999999
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHHhhhhhcCCC
Q 015720 368 EPIENGSAGTNEEALKRFAKMLSDERKLRESKSPH 402 (402)
Q Consensus 368 ~~~~~~~~~~n~~~l~~~a~~l~~~r~~r~~~~~~ 402 (402)
+... ...|.+++++++.+|+.|+++|+...||
T Consensus 424 -~~~~--~~snde~~~~~~~~l~we~~rrss~a~~ 455 (503)
T KOG0513|consen 424 -PRSE--EVSNDEALEEPAMQLVWEAKRRSSRAPP 455 (503)
T ss_pred -cccc--ccccchhhhhHHHHHHHHHHHhccCCCC
Confidence 3333 3899999999999999999999988765
No 15
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=99.97 E-value=3.8e-31 Score=236.20 Aligned_cols=162 Identities=23% Similarity=0.275 Sum_probs=129.1
Q ss_pred EEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhC-
Q 015720 20 ILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHG- 98 (402)
Q Consensus 20 iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~- 98 (402)
.|+|+|||+||++++|+|++|+++ | ..||+|+|||+|||+|++++++. +.+++.. +.+..
T Consensus 2 ~LvL~GGG~rG~~~~Gvl~~L~e~-----g------~~~d~i~GtSaGAi~aa~~a~g~-------~~~~~~~-~~~~~~ 62 (175)
T cd07228 2 GLALGSGGARGWAHIGVLRALEEE-----G------IEIDIIAGSSIGALVGALYAAGH-------LDALEEW-VRSLSQ 62 (175)
T ss_pred EEEecCcHHHHHHHHHHHHHHHHC-----C------CCeeEEEEeCHHHHHHHHHHcCC-------CHHHHHH-HHhhhH
Confidence 599999999999999999999886 1 24999999999999999999883 4444433 22111
Q ss_pred CCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCc
Q 015720 99 PKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDA 178 (402)
Q Consensus 99 ~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~ 178 (402)
.+.+. ++. ......+.++.+.+++.|++++++.++.++.+++.|++||++++++++|++ .
T Consensus 63 ~~~~~----~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~----------~ 122 (175)
T cd07228 63 RDVLR----LLD------LSASRSGLLKGEKVLEYLREIMGGVTIEELPIPFAAVATDLQTGKEVWFRE----------G 122 (175)
T ss_pred HHHHh----hcc------cCCCcccccCHHHHHHHHHHHcCCCCHHHCCCCEEEEEEECCCCCEEEECC----------C
Confidence 01110 111 001124678899999999999999999999999999999999999999975 2
Q ss_pred hHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHH
Q 015720 179 QLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAIS 229 (402)
Q Consensus 179 ~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ 229 (402)
.+++|++||||+|++|||+.++ | ..|+|||+.+|.|+..|+.
T Consensus 123 ~l~~av~AS~a~P~~f~p~~~~-----g----~~~vDGG~~~~~P~~~a~~ 164 (175)
T cd07228 123 SLIDAIRASISIPGIFAPVEHN-----G----RLLVDGGVVNPIPVSVARA 164 (175)
T ss_pred CHHHHHHHHcccCccccCEEEC-----C----EEEEeccCcCCCcHHHHHH
Confidence 4899999999999999999986 3 3799999999999976653
No 16
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.97 E-value=3.2e-31 Score=244.86 Aligned_cols=178 Identities=20% Similarity=0.246 Sum_probs=146.6
Q ss_pred EEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCC
Q 015720 20 ILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGP 99 (402)
Q Consensus 20 iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~ 99 (402)
.|+|+|||+||++++|+|++|+++ | ..+|.|+|||+|||+|++++++ ++.+++.+.|.+...
T Consensus 2 ~LvL~GGG~rG~~~~GvL~aL~e~-----g------i~~~~i~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~ 63 (221)
T cd07210 2 ALVLSSGFFGFYAHLGFLAALLEM-----G------LEPSAISGTSAGALVGGLFASG-------ISPDEMAELLLSLER 63 (221)
T ss_pred eEEEcChHHHHHHHHHHHHHHHHc-----C------CCceEEEEeCHHHHHHHHHHcC-------CCHHHHHHHHHhcCH
Confidence 599999999999999999999986 1 2479999999999999999988 578888888776532
Q ss_pred CcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCch
Q 015720 100 KIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDAQ 179 (402)
Q Consensus 100 ~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~~ 179 (402)
+.| |. . .......+.|+.+.+++.|++++++.++.++..++.|+++|+.++++++|++. .
T Consensus 64 ~~~------~~-~---~~~~~~~g~~~~~~l~~~l~~~l~~~~~~~~~~~l~i~atdl~tg~~~~f~~~----------~ 123 (221)
T cd07210 64 KDF------WM-F---WDPPLRGGLLSGDRFAALLREHLPPDRFEELRIPLAVSVVDLTSRETLLLSEG----------D 123 (221)
T ss_pred HHH------hh-h---ccccCCccccChHHHHHHHHHHcCCCCHHHCCCCeEEEEEECCCCCEEEECCC----------C
Confidence 211 10 0 00112357899999999999999999999999999999999999999999762 4
Q ss_pred HHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCceEEEEecC
Q 015720 180 LADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPLDYTRFLVISIGT 259 (402)
Q Consensus 180 l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~~~~~~~vlSiGT 259 (402)
+++|++||||+|++|+|+.+++ ..|+|||+.+|+|+..++ . +.+.+++|++++
T Consensus 124 l~~av~AS~aiP~~f~Pv~i~g---------~~~vDGGv~~n~Pi~~~~----~--------------~~~~ii~v~~~~ 176 (221)
T cd07210 124 LAEAVAASCAVPPLFQPVEIGG---------RPFVDGGVADRLPFDALR----P--------------EIERILYHHVAP 176 (221)
T ss_pred HHHHHHHHcccccccCCEEECC---------EEEEeccccccccHHHHh----c--------------CCCEEEEEECCC
Confidence 8999999999999999999863 379999999999997665 1 125688888888
Q ss_pred CCC
Q 015720 260 GSK 262 (402)
Q Consensus 260 G~~ 262 (402)
+..
T Consensus 177 ~~~ 179 (221)
T cd07210 177 RRP 179 (221)
T ss_pred CCC
Confidence 874
No 17
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=99.97 E-value=1.5e-30 Score=245.72 Aligned_cols=243 Identities=18% Similarity=0.200 Sum_probs=165.1
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
...|+|+|||+||++|+|||++|||+ ...||+|+|||+||++|++++++ +++.++.....+.
T Consensus 10 ~igLVL~GGGaRG~ahiGVL~aLeE~-----------gi~~d~v~GtSaGAiiga~ya~g-------~~~~~~~~r~~~~ 71 (269)
T cd07227 10 AIGLVLGGGGARGISHIGILQALEEA-----------GIPIDAIGGTSIGSFVGGLYARE-------ADLVPIFGRAKKF 71 (269)
T ss_pred CEEEEECCcHHHHHHHHHHHHHHHHc-----------CCCccEEEEECHHHHHHHHHHcC-------CchHHHHHHHHHH
Confidence 46799999999999999999999986 23599999999999999999988 4555554322221
Q ss_pred CCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLD 177 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~ 177 (402)
..+.+ ++++ .+... ........+...+...|.+.|++..+.|...++++++||+.++++++|++
T Consensus 72 ~~~~~----~~~~-~l~d~-~~p~~~~~~g~~~~~~l~~~~~~~~iedl~~pf~~~aTdl~tg~~~~~~~---------- 135 (269)
T cd07227 72 AGRMA----SMWR-FLSDV-TYPFASYTTGHEFNRGIWKTFGNTHIEDFWIPFYANSTNITHSRMEIHSS---------- 135 (269)
T ss_pred HHHHh----HHHH-HHhhc-ccccccccchhHHHHHHHHHcCcCCHHHCCCCEEEEEEECCCCCEEEecC----------
Confidence 11110 0111 10000 00012234456677778999999999999999999999999999999975
Q ss_pred chHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCceEEEEe
Q 015720 178 AQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPLDYTRFLVISI 257 (402)
Q Consensus 178 ~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~~~~~~~vlSi 257 (402)
..+|+|++||||+|++|||+.++ | ..|+|||+.+|.|+..+.+. +.+.+++|.+
T Consensus 136 g~l~~avrAS~slPg~~pPv~~~-----G----~~~vDGGv~dnlPv~~~~~~-----------------G~~~ii~V~v 189 (269)
T cd07227 136 GYAWRYIRASMSLAGLLPPLSDN-----G----SMLLDGGYMDNLPVSPMRSL-----------------GIRDIFAVDV 189 (269)
T ss_pred CCHHHHHHHHccchhcCCCEEEC-----C----EEEEcccCCccHhHHHHHHc-----------------CCCEEEEEEC
Confidence 35999999999999999999986 3 37999999999999655321 3477999999
Q ss_pred cCCCCCCCcccchhhhccccccc-cc---ccCCCchHHHHHHhhhhhHHHHHHHHHHHhcCCCCcEEEe
Q 015720 258 GTGSKKSEHKYNAKMASKWGIIS-WL---YDNGDTPLLDCYGRAIGDMVDYHISVVFQALQSEDNYLRI 322 (402)
Q Consensus 258 GTG~~~~~~~~~~~~~~~~g~~~-w~---~~~~~~~l~~~~~~a~~~~~~~~~~~l~~~~~~~~~Y~Ri 322 (402)
|++.......+.......|.++. |. .....+++.++++.+.....+.+++.+.+ ...+-|+|-
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~i~~r~~~~~~~~~~~~~~~--~~~~~~i~p 256 (269)
T cd07227 190 GSVDDRTPMDYGDSVSGVWIFFNRWNPFSSRPNVPSMAEIQSRLTYVSSVKTLEKVKA--TPGCHYMRP 256 (269)
T ss_pred CCcCCCCcccccccCccHHHHHHHhccccCCCCCCCHHHHHHHHHHHhhHHHHHHHhh--CCceEEEEC
Confidence 97764333223211112233322 32 11224568888777655445555544421 124668875
No 18
>PRK10279 hypothetical protein; Provisional
Probab=99.96 E-value=1.4e-27 Score=229.24 Aligned_cols=179 Identities=15% Similarity=0.210 Sum_probs=139.9
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
...|+|.|||+||++|+|||++|+++ ...||+|+|||+||++|++++++. ..++.+++...
T Consensus 5 ~igLvL~GGGarG~ahiGVL~aL~E~-----------gi~~d~i~GtS~GAlvga~yA~g~--------~~~l~~~~~~~ 65 (300)
T PRK10279 5 KIGLALGSGAARGWSHIGVINALKKV-----------GIEIDIVAGCSIGSLVGAAYACDR--------LSALEDWVTSF 65 (300)
T ss_pred cEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCcCEEEEEcHHHHHHHHHHcCC--------hHHHHHHHhcc
Confidence 46799999999999999999999986 235899999999999999999873 24555443322
Q ss_pred CCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLD 177 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~ 177 (402)
. |.. ++. . .+ +.....+.++.+.+.+.|++.++..++.++..++.|++||+.++++++|+.
T Consensus 66 ~---~~~---~~~-~-~d-~~~~~~gl~~~~~~~~~l~~~~~~~~~e~l~~~~~ivAtdl~tg~~v~~~~---------- 126 (300)
T PRK10279 66 S---YWD---VLR-L-MD-LSWQRGGLLRGERVFNQYREIMPETEIENCSRRFGAVATNLSTGRELWFTE---------- 126 (300)
T ss_pred c---hhh---hhh-h-hc-cCCCcCcccCcHHHHHHHHHHcChhhHHhCCCCEEEEEEECCCCCEEEecC----------
Confidence 1 100 010 0 00 001124678899999999999999999999999999999999999999975
Q ss_pred chHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCceEEEEe
Q 015720 178 AQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPLDYTRFLVISI 257 (402)
Q Consensus 178 ~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~~~~~~~vlSi 257 (402)
..+++|++||||+|++|+|+.++ | ..|+|||+.+|.|+..|... +.+.+++|.+
T Consensus 127 g~l~~avrAS~aiP~vf~Pv~~~-----g----~~~vDGGv~~~~Pv~~a~~~-----------------Gad~viaV~v 180 (300)
T PRK10279 127 GDLHLAIRASCSMPGLMAPVAHN-----G----YWLVDGAVVNPVPVSLTRAL-----------------GADIVIAVDL 180 (300)
T ss_pred CCHHHHHHHhcccccCCCCEEEC-----C----EEEEECccCccccHHHHHHc-----------------CCCEEEEEEC
Confidence 35889999999999999999986 3 37999999999999766432 2367888888
Q ss_pred cCC
Q 015720 258 GTG 260 (402)
Q Consensus 258 GTG 260 (402)
...
T Consensus 181 ~~~ 183 (300)
T PRK10279 181 QHD 183 (300)
T ss_pred CCc
Confidence 653
No 19
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.96 E-value=1.6e-28 Score=226.33 Aligned_cols=167 Identities=22% Similarity=0.341 Sum_probs=134.3
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|+|+|||+||+|++|+|++|++. ...||+|+|||+||++|++++++.. . ..+++.++|.++...
T Consensus 1 LvL~GGG~rG~~~~Gvl~aL~e~-----------g~~~d~i~GtS~GAl~aa~~a~~~~----~-~~~~l~~~~~~~~~~ 64 (215)
T cd07209 1 LVLSGGGALGAYQAGVLKALAEA-----------GIEPDIISGTSIGAINGALIAGGDP----E-AVERLEKLWRELSRE 64 (215)
T ss_pred CEecccHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcCCc----H-HHHHHHHHHHhCChh
Confidence 78999999999999999999986 2369999999999999999999831 0 267788888764221
Q ss_pred cCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCC---ceEEeeecCCCCcceeecCCCCCCCCCCC
Q 015720 101 IFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLT---NVAIPTFDIKKLQPTIFSSFQVAASPDLD 177 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~---~l~V~a~d~~~~~p~~f~~~~~~~~~~~~ 177 (402)
. ++ ++.++++.+...++.+... ++.|+++|+.++++++|++...
T Consensus 65 -----~---------~~------------l~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~tg~~~~f~~~~~------- 111 (215)
T cd07209 65 -----D---------VF------------LRGLLDRALDFDTLRLLAILFAGLVIVAVNVLTGEPVYFDDIPD------- 111 (215)
T ss_pred -----h---------HH------------HHHHHHHhCCHHHHhhccccCceEEEEEEEcCCCCEEEEeCCCc-------
Confidence 0 00 5666777777666666554 5999999999999999997542
Q ss_pred chHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhcCCCCCCCCCCCCCceEEEEe
Q 015720 178 AQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILKNPDFCPINPLDYTRFLVISI 257 (402)
Q Consensus 178 ~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~~~~~~p~~~~~~~~~~vlSi 257 (402)
..++++++||||+|++|||+.+++ ..|+|||+.+|+|+..++.. ++++++||++
T Consensus 112 ~~~~~av~AS~aiP~~f~pv~i~g---------~~yvDGGv~~n~Pv~~a~~~-----------------g~~~iivv~~ 165 (215)
T cd07209 112 GILPEHLLASAALPPFFPPVEIDG---------RYYWDGGVVDNTPLSPAIDL-----------------GADEIIVVSL 165 (215)
T ss_pred chHHHHHHHhccccccCCCEEECC---------eEEEcCccccCcCHHHHHhc-----------------CCCEEEEEEC
Confidence 569999999999999999999863 37999999999999777642 2477999999
Q ss_pred cCCCC
Q 015720 258 GTGSK 262 (402)
Q Consensus 258 GTG~~ 262 (402)
++...
T Consensus 166 ~~~~~ 170 (215)
T cd07209 166 SDKGR 170 (215)
T ss_pred CCccc
Confidence 98874
No 20
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=99.96 E-value=5.1e-28 Score=230.25 Aligned_cols=166 Identities=22% Similarity=0.316 Sum_probs=126.2
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|+|+|||+||++++|||++|++. .+. .||+|+|||+||++|++++++. + .+..+.|.....+
T Consensus 1 Lvl~GGG~rG~~~~Gvl~al~e~---------~~~-~fd~i~GtSaGAi~a~~~~~g~-------~-~~~~~~~~~~~~~ 62 (266)
T cd07208 1 LVLEGGGMRGAYTAGVLDAFLEA---------GIR-PFDLVIGVSAGALNAASYLSGQ-------R-GRALRINTKYATD 62 (266)
T ss_pred CeeccchhhHHHHHHHHHHHHHc---------CCC-CCCEEEEECHHHHhHHHHHhCC-------c-chHHHHHHHhcCC
Confidence 79999999999999999999987 122 5999999999999999999884 2 2223344333211
Q ss_pred cCCccccchhhhHHHHHHhh-hcCCCChHHHHHHH---HHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCC
Q 015720 101 IFPQLRGMLANSVVNLVRAL-MGTKYDGKYLHKVI---KENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDL 176 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l-~~~~y~~~~l~~~l---~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~ 176 (402)
.. +++ + . ..+ .+..++.+.+.+.+ ...|+..++.++..++.|++||++++++++|++...
T Consensus 63 ----~~-~~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~at~~~~g~~~~~~~~~~------ 126 (266)
T cd07208 63 ----PR-YLG-L-R---SLLRTGNLFDLDFLYDELPDGLDPFDFEAFAASPARFYVVATDADTGEAVYFDKPDI------ 126 (266)
T ss_pred ----CC-ccC-H-H---HHhcCCCeecHHHHHhhccCccCCcCHHHHHhCCCcEEEEEEECCCCCEEEEeCcCc------
Confidence 11 111 0 1 112 24567777777765 445666778888899999999999999999988543
Q ss_pred CchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHH
Q 015720 177 DAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAIS 229 (402)
Q Consensus 177 ~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ 229 (402)
+..+++|++||||+|++|||+.++ | ..|+|||+.+|+|+..|+.
T Consensus 127 ~~~l~~av~AS~aiP~~f~pv~i~-----g----~~yvDGGv~~~~P~~~a~~ 170 (266)
T cd07208 127 LDDLLDALRASSALPGLFPPVRID-----G----EPYVDGGLSDSIPVDKAIE 170 (266)
T ss_pred chHHHHHHHHHhcchhhcCCEEEC-----C----EEEEcCccCcchhHHHHHH
Confidence 357999999999999999999986 3 3799999999999976654
No 21
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=99.94 E-value=3e-26 Score=204.00 Aligned_cols=160 Identities=21% Similarity=0.285 Sum_probs=115.7
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhC--
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHG-- 98 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~-- 98 (402)
|+|+|||+||++++|||++|+++ . ..||+|+|||+|||+|++++++ .+.+++..++.+..
T Consensus 1 Lvl~GGG~rG~~~~Gvl~aL~e~---------g--i~~d~v~GtSaGAi~aa~~a~g-------~~~~~~~~~~~~~~~~ 62 (172)
T cd07198 1 LVLSGGGALGIYHVGVAKALRER---------G--PLIDIIAGTSAGAIVAALLASG-------RDLEEALLLLLRLSRE 62 (172)
T ss_pred CEECCcHHHHHHHHHHHHHHHHc---------C--CCCCEEEEECHHHHHHHHHHcC-------CCHHHHHHHHHHHHHH
Confidence 78999999999999999999987 1 2399999999999999999998 45666665542221
Q ss_pred -CCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCC
Q 015720 99 -PKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLD 177 (402)
Q Consensus 99 -~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~ 177 (402)
+..|... +. ....+....++..++ .+....+.+...++.|++||+.++++++|.. . .+
T Consensus 63 ~~~~~~~~--~~-----------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~at~l~tg~~~~~~~-~------~~ 121 (172)
T cd07198 63 VRLRFDGA--FP-----------PTGRLLGILRQPLLS-ALPDDAHEDASGKLFISLTRLTDGENVLVSD-T------SK 121 (172)
T ss_pred HHHhccCC--cC-----------cccchhHHHHHHHHH-hccHhHHHHCCCCEEEEEEECCCCCEEEEeC-C------Cc
Confidence 1111110 00 011111222233333 3445567778899999999999999999965 2 24
Q ss_pred chHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHH
Q 015720 178 AQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLV 226 (402)
Q Consensus 178 ~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~ 226 (402)
..+++|++||||+|++|+|+.+... | ..|+|||+.+|+|+..
T Consensus 122 ~~l~~av~AS~aiP~~f~p~~~~~~---g----~~~vDGGv~~n~Pv~~ 163 (172)
T cd07198 122 GELWSAVRASSSIPGYFGPVPLSFR---G----RRYGDGGLSNNLPVAE 163 (172)
T ss_pred chHHHHHHHHcchhhhcCceeecCC---C----eEEEeCCcccCCCCcc
Confidence 6799999999999999999998211 3 3799999999999954
No 22
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=99.93 E-value=2.9e-25 Score=207.71 Aligned_cols=161 Identities=20% Similarity=0.290 Sum_probs=127.5
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|||+|||.||+|++|||++|+|+ .+...+|.|+|||+||++|++++++ .+.+++.+.+.+...+
T Consensus 3 LsfsGGG~rG~yh~GVl~aL~e~---------g~~~~~d~i~GtSAGAl~aa~~a~g-------~~~~~~~~~~~~~~~~ 66 (245)
T cd07218 3 LSFAGCGFLGIYHVGVAVCLKKY---------APHLLLNKISGASAGALAACCLLCD-------LPLGEMTSDFLRVVRE 66 (245)
T ss_pred EEEeCcHHHHHHHHHHHHHHHHh---------CcccCCCeEEEEcHHHHHHHHHHhC-------CcHHHHHHHHHHHHHH
Confidence 89999999999999999999997 2234579999999999999999998 3567777666555432
Q ss_pred cCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCch
Q 015720 101 IFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDAQ 179 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~~ 179 (402)
..... ++ . +.+.|+ ...+++.|++++++....+...++.|++|++.+++.++|+.++. +..
T Consensus 67 ~~~~~---lg--------~-~~p~~~l~~~l~~~l~~~lp~d~~~~~~~~L~i~~T~l~~g~~~~~s~f~s------~~d 128 (245)
T cd07218 67 ARRHS---LG--------P-FSPSFNIQTCLLEGLQKFLPDDAHERVSGRLHISLTRVSDGKNVIVSEFES------REE 128 (245)
T ss_pred HHHhc---cc--------C-CccccCHHHHHHHHHHHHCCcchHHhCCCCEEEEEEECCCCCeEEEecCCC------cch
Confidence 21110 11 1 224455 57888899999998887778889999999999999999998754 357
Q ss_pred HHHHHHhhcCCCCCC--CceeecCCCCCCCcceeeeeeccccCCchH
Q 015720 180 LADIAIGTSAAPTYF--PAHYFKNPDEHGTLKEFNLIDGGVAANNPT 224 (402)
Q Consensus 180 l~da~~ASsAaP~yF--pp~~i~~~~~~G~~~~~~~iDGGv~~NnP~ 224 (402)
+++|++|||++|+|+ .|+.++ | ..|+|||+.+|.|+
T Consensus 129 Li~al~AS~~IP~~~g~~P~~~~-----G----~~~vDGGv~dnlP~ 166 (245)
T cd07218 129 LLQALLCSCFIPVFSGLLPPKFR-----G----VRYMDGGFSDNLPT 166 (245)
T ss_pred HHHHHHHhcCCCcccCCCCeEEC-----C----EEEEcCcccCCCCC
Confidence 999999999999994 566665 3 37999999999998
No 23
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.92 E-value=1.8e-24 Score=215.79 Aligned_cols=184 Identities=17% Similarity=0.206 Sum_probs=136.9
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
+..+|+|+|||+||++++|||++|+++ .-.||+|+|||+|||+|++++.. +.+|+.+++..
T Consensus 66 grtALvLsGGG~rG~~h~GVlkaL~e~-----------gllp~iI~GtSAGAivaalla~~--------t~~el~~~~~~ 126 (407)
T cd07232 66 GRTALCLSGGAAFAYYHFGVVKALLDA-----------DLLPNVISGTSGGSLVAALLCTR--------TDEELKQLLVP 126 (407)
T ss_pred CCEEEEECCcHHHHHHHHHHHHHHHhC-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHhh
Confidence 357999999999999999999999987 24589999999999999999975 45777776654
Q ss_pred hCCCcCCcc-ccchhhhHHHHHHhh-hcCCCChHHHHHH-HHHHcccccccccC----CceEEeeecCCCCcceeecCCC
Q 015720 97 HGPKIFPQL-RGMLANSVVNLVRAL-MGTKYDGKYLHKV-IKENLKDTKLHQTL----TNVAIPTFDIKKLQPTIFSSFQ 169 (402)
Q Consensus 97 ~~~~iF~~~-~~~~~~~~~~~~~~l-~~~~y~~~~l~~~-l~~~~~~~~l~d~~----~~l~V~a~d~~~~~p~~f~~~~ 169 (402)
.....|... ..++. ++. +.+ .+..+|.+.+++. ++..+|+.++.+.. +.+.|++++.+++++..|.||.
T Consensus 127 ~~~~~~~~~~~~~~~-~~~---~~l~~G~~~d~~~l~~~~~~~~~gd~TFeEa~~~tgr~l~I~vt~~d~~~~~~lln~~ 202 (407)
T cd07232 127 ELARKITACEPPWLV-WIP---RWLKTGARFDSVEWARTCCWFTRGSMTFEEAYERTGRILNISVVPADPHSPTILLNYL 202 (407)
T ss_pred hhhhhhhhccchHHH-HHH---HHHhcCCCCCHHHHHHHHHHHhcCCCCHHHHHHhcCCEEEEEEEECCCCCceEEeccC
Confidence 222111110 11222 222 222 3568999999998 88899998877653 4466777777778887777765
Q ss_pred CCCCCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCc-----ceeeeeeccccCCchHHHH
Q 015720 170 VAASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTL-----KEFNLIDGGVAANNPTLVA 227 (402)
Q Consensus 170 ~~~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~-----~~~~~iDGGv~~NnP~~~a 227 (402)
.. .++.+|+|++||||+|++|+|+++-.+|.+|+. .+..|+|||+.+|.|...+
T Consensus 203 ts----p~v~I~sAV~AS~svPgvf~pv~l~~k~~~g~~~~~~~~g~~~~DGgv~~diP~~~l 261 (407)
T cd07232 203 TS----PNCTIWSAVLASAAVPGILNPVVLMMKDPDGTLIPPFSFGSKWKDGSLRTDIPLKAL 261 (407)
T ss_pred CC----CccHHHHHHhcccCccccccCeEEEeecCCCCcccccCCCCceecCCcCcccHHHHH
Confidence 42 368899999999999999999998655555643 2347999999999999554
No 24
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=99.92 E-value=9.4e-25 Score=204.57 Aligned_cols=164 Identities=22% Similarity=0.328 Sum_probs=125.2
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|||.|||.||+|++|||++|+++ | +.+...+|.|+|||+||++|++++++ .+.+++.+.+.+...+
T Consensus 2 LslsGGG~~G~yh~GVl~~L~e~-----g--~~l~~~~~~i~GtSAGAl~aa~~a~g-------~~~~~~~~~~~~~~~~ 67 (243)
T cd07204 2 LSFSGCGFLGIYHVGVASALREH-----A--PRLLQNARRIAGASAGAIVAAVVLCG-------VSMEEACSFILKVVSE 67 (243)
T ss_pred eeEcchHHHHHHHHHHHHHHHHc-----C--cccccCCCEEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHHHHhh
Confidence 89999999999999999999987 2 12223357999999999999999998 4667776666555433
Q ss_pred cCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCch
Q 015720 101 IFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDAQ 179 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~~ 179 (402)
..... ++ .+.+.|+ .+.+++.|.+.+++........++.|++||+.++++++|+.+..+ ..
T Consensus 68 ~~~~~---~g---------~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~~g~~~~~~~f~s~------~~ 129 (243)
T cd07204 68 ARRRS---LG---------PLHPSFNLLKILRQGLEKILPDDAHELASGRLHISLTRVSDGENVLVSEFDSK------EE 129 (243)
T ss_pred hhhhh---cC---------cccccchHHHHHHHHHHHHCChhHHHhcCCCEEEEEEECCCCCEEEEecCCCc------hH
Confidence 21111 11 0112222 245777888888887777777899999999999999999987543 46
Q ss_pred HHHHHHhhcCCCCCC--CceeecCCCCCCCcceeeeeeccccCCchHH
Q 015720 180 LADIAIGTSAAPTYF--PAHYFKNPDEHGTLKEFNLIDGGVAANNPTL 225 (402)
Q Consensus 180 l~da~~ASsAaP~yF--pp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~ 225 (402)
+.+|++|||++|+|| .|+.++ | ..|+|||+.+|.|+.
T Consensus 130 Li~Al~AS~~iP~~~g~~P~~~~-----G----~~~vDGGv~~~lP~~ 168 (243)
T cd07204 130 LIQALVCSCFIPFYCGLIPPKFR-----G----VRYIDGGLSDNLPIL 168 (243)
T ss_pred HHHHHHHhccCCcccCCCCeEEC-----C----EEEEeCCcccCCCCC
Confidence 899999999999994 788886 3 379999999999983
No 25
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.92 E-value=6.3e-25 Score=206.10 Aligned_cols=164 Identities=22% Similarity=0.300 Sum_probs=121.9
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|||.|||+||+|++|||++|+++ | +++.+.||.|+|||+||++|++++... ....++.+++......
T Consensus 2 L~l~GGG~rG~yhiGVl~~L~e~-----g--~~l~~~~~~i~GtSaGAl~aa~~a~~~------~~~~~~~~~~~~~~~~ 68 (246)
T cd07222 2 LSFAACGFLGIYHLGAAKALLRH-----G--KKLLKRVKRFAGASAGSLVAAVLLTAP------EKIEECKEFTYKFAEE 68 (246)
T ss_pred eeEcccHHHHHHHHHHHHHHHHc-----C--chhhccCCEEEEECHHHHHHHHHhcCh------HHHHHHHHHHHHHHHH
Confidence 89999999999999999999987 2 234567999999999999999998542 1245555444333222
Q ss_pred cCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCch
Q 015720 101 IFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDAQ 179 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~~ 179 (402)
+.... +. .+.+.|. .+.|++.|++++++........++.|++||+.++++++|+.+..+ ..
T Consensus 69 ~~~~~---~~---------~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~aTdl~tg~~v~~~~f~s~------~~ 130 (246)
T cd07222 69 VRKQR---FG---------AMTPGYDFMARLRKGIESILPTDAHELANDRLHVSITNLKTRKNYLVSNFTSR------ED 130 (246)
T ss_pred HHhcc---cC---------CCCCcchHHHHHHHHHHHHCCHHHHhcCCCcEEEEEEECCCCCeEEEeccCCc------ch
Confidence 11111 00 0112222 567888899998875433334789999999999999999987543 45
Q ss_pred HHHHHHhhcCCCCC--CCceeecCCCCCCCcceeeeeeccccCCchH
Q 015720 180 LADIAIGTSAAPTY--FPAHYFKNPDEHGTLKEFNLIDGGVAANNPT 224 (402)
Q Consensus 180 l~da~~ASsAaP~y--Fpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~ 224 (402)
+.+|++||||+|+| |+|+.+++ ..|+|||+.+|.|+
T Consensus 131 L~~av~AS~aiP~~~g~~pv~~~G---------~~~vDGGv~~~~P~ 168 (246)
T cd07222 131 LIKVLLASCYVPVYAGLKPVEYKG---------QKWIDGGFTNSLPV 168 (246)
T ss_pred HHHHHHHhhcCccccCCCCeEECC---------EEEEecCccCCCCC
Confidence 99999999999998 58998863 37999999999997
No 26
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.92 E-value=1.5e-24 Score=203.60 Aligned_cols=163 Identities=18% Similarity=0.288 Sum_probs=125.4
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|||+|||+||+|++|||++|+++- +++...||.|+|||+||++|+.++++ .+.+++.+.+.++...
T Consensus 3 Lsl~GGG~rG~yh~GVl~aL~e~~-------~~l~~~~~~i~GtSAGAl~aa~~asg-------~~~~~~~~~~~~~~~~ 68 (252)
T cd07221 3 LSFAGCGFLGFYHVGVTRCLSERA-------PHLLRDARMFFGASAGALHCVTFLSG-------LPLDQILQILMDLVRS 68 (252)
T ss_pred EEEeCcHHHHHHHHHHHHHHHHhC-------cchhccCCEEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHHHHHh
Confidence 899999999999999999999871 23455699999999999999999988 4567888777665432
Q ss_pred cCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCch
Q 015720 101 IFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDAQ 179 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~~ 179 (402)
.-... + +++++.|+ ...+++.++++++.........++.|++||+.++++++|+.++. +..
T Consensus 69 ~~~~~---~---------g~~~~~~~~~~~l~~~l~~~lp~~~~~~~~~~l~I~~T~l~tg~~v~~~~f~s------~~~ 130 (252)
T cd07221 69 ARSRN---I---------GILHPSFNLSKHLRDGLQRHLPDNVHQLISGKMCISLTRVSDGENVLVSDFHS------KDE 130 (252)
T ss_pred ccccc---c---------cccCcccCHHHHHHHHHHHHCCcCHHHhcCCCEEEEEEECCCCCEEEEecCCC------chH
Confidence 21111 1 11223333 46777888888887543334568999999999999999998754 357
Q ss_pred HHHHHHhhcCCCCC--CCceeecCCCCCCCcceeeeeeccccCCchH
Q 015720 180 LADIAIGTSAAPTY--FPAHYFKNPDEHGTLKEFNLIDGGVAANNPT 224 (402)
Q Consensus 180 l~da~~ASsAaP~y--Fpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~ 224 (402)
+++|++||||+|+| |.|+.++ | ..|+|||+.+|.|+
T Consensus 131 l~~av~AS~siP~~~g~~P~~~~-----G----~~yvDGGv~dnlPv 168 (252)
T cd07221 131 VVDALVCSCFIPFFSGLIPPSFR-----G----VRYVDGGVSDNVPF 168 (252)
T ss_pred HHHHHHHHccCccccCCCCeEEC-----C----EEEEeCCcccCCCc
Confidence 99999999999999 4566665 3 37999999999998
No 27
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=99.92 E-value=2.2e-24 Score=215.99 Aligned_cols=186 Identities=20% Similarity=0.282 Sum_probs=134.3
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
+..+|+|+|||+||++++|||++|+++ . -.+|+|+|||+|||+|++++.. +.+|+.+++..
T Consensus 72 GrtALvLsGGG~rG~~hiGVLkaL~E~---------g--l~p~vIsGTSaGAivAal~as~--------~~eel~~~l~~ 132 (421)
T cd07230 72 GRTALLLSGGGTFGMFHIGVLKALFEA---------N--LLPRIISGSSAGSIVAAILCTH--------TDEEIPELLEE 132 (421)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc---------C--CCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHHHh
Confidence 468999999999999999999999886 2 2479999999999999999975 46788777765
Q ss_pred hCC---CcCCccccchhhhHHHHHHhh-hcCCCChHHHHHHHHHHccccccccc----CCceEEeeecCCCCc-ceeecC
Q 015720 97 HGP---KIFPQLRGMLANSVVNLVRAL-MGTKYDGKYLHKVIKENLKDTKLHQT----LTNVAIPTFDIKKLQ-PTIFSS 167 (402)
Q Consensus 97 ~~~---~iF~~~~~~~~~~~~~~~~~l-~~~~y~~~~l~~~l~~~~~~~~l~d~----~~~l~V~a~d~~~~~-p~~f~~ 167 (402)
... .+|........ ++..+.+.+ .++.||.+.+++.+++.+|+.++.+. .+.+.|++++.+.++ |.++..
T Consensus 133 ~~~~~~~~f~~~~~~~~-~~~~~~~l~~~g~~~d~~~l~~~l~~~lgd~tF~Eay~rt~r~L~I~vt~~~~~~~p~llny 211 (421)
T cd07230 133 FPYGDFNVFEDPDQEEN-VLQKLSRFLKYGSWFDISHLTRVMRGFLGDLTFQEAYNRTRRILNITVSPASIYELPRLLNY 211 (421)
T ss_pred cchHHHHHHhcccccch-HHHHHHHHHhcCCCcCHHHHHHHHHHHhCCCCHHHHHHhhCCeEEEEEEeccccCCCeeeee
Confidence 321 23433210001 222222223 35689999999999999999887764 445677776666654 555543
Q ss_pred CCCCCCCCCCchHHHHHHhhcCCCCCCCceeecCCCC-CCCc-----ceeeeeeccccCCchHHHH
Q 015720 168 FQVAASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDE-HGTL-----KEFNLIDGGVAANNPTLVA 227 (402)
Q Consensus 168 ~~~~~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~-~G~~-----~~~~~iDGGv~~NnP~~~a 227 (402)
..+ .++.+|+|++||||+|++|+|+++..+|+ +|+. ....|+|||+.+|.|+..+
T Consensus 212 ~t~-----p~v~I~~AV~AS~AlP~vf~pv~l~~Kd~~~g~i~p~~~~g~~~vDGgv~~~iPi~~l 272 (421)
T cd07230 212 ITA-----PNVLIWSAVCASCSVPGVFPSSPLYEKDPKTGEIVPWNPSSVKWIDGSVDNDLPMTRL 272 (421)
T ss_pred ccC-----CCcHHHHHHHHhcCchhhcCCeEEEeecCCCCceecccCCCCceeCCCccccChHHHH
Confidence 333 36779999999999999999999854442 2321 1247999999999999554
No 28
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.92 E-value=5.6e-24 Score=206.34 Aligned_cols=172 Identities=24% Similarity=0.281 Sum_probs=131.6
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
...|+|.|||+||++|+|||++|+++ .-.||+|+|||+||++|++++++ ++.+++..+-..+
T Consensus 11 ~i~LvL~GGgArG~~hiGVl~aL~e~-----------gi~~~~iaGtS~GAiva~l~A~g-------~~~~~~~~~~~~l 72 (306)
T COG1752 11 RIGLVLGGGGARGAAHIGVLKALEEA-----------GIPIDVIAGTSAGAIVAALYAAG-------MDEDELELAAQRL 72 (306)
T ss_pred eEEEEecCcHHHHHHHHHHHHHHHHc-----------CCCccEEEecCHHHHHHHHHHcC-------CChhHHHHHHHHH
Confidence 47899999999999999999999987 24689999999999999999998 3444444433322
Q ss_pred CCCcCCccccchhhhHHHHHHh-hhcCCCChHHHHHHHHHHcccc--cccccCCc-eEEeeecCCCCcceeecCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRA-LMGTKYDGKYLHKVIKENLKDT--KLHQTLTN-VAIPTFDIKKLQPTIFSSFQVAAS 173 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~-l~~~~y~~~~l~~~l~~~~~~~--~l~d~~~~-l~V~a~d~~~~~p~~f~~~~~~~~ 173 (402)
...... ...++. +....+.. ...+.++.+.+.+.+++++++. .+.++..+ +.|+++|+.+++.++|+.
T Consensus 73 ~~~~~~-~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~atd~~~g~~~~~~~------ 144 (306)
T COG1752 73 TARWDN-ARDLLR-LLDLTLPGGRPLGLLRGEKLRNLLRELLGDLLFDFEDLPIPLLYVVATDLLTGREVVFSE------ 144 (306)
T ss_pred Hhhhcc-ccchhh-ccchhhhccCccceecHHHHHHHHHHHhcccccCHHHcCCCcEEEEeeEcCCCCEEEecC------
Confidence 211110 000000 00000000 0136788999999999999999 99999999 999999999999999975
Q ss_pred CCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHH
Q 015720 174 PDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAI 228 (402)
Q Consensus 174 ~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al 228 (402)
..+++|++||||+|++|||+.+++ ..|+|||+.+|.|+..+.
T Consensus 145 ----g~~~~av~AS~siP~vF~Pv~i~~---------~~~vDGg~~~n~Pv~~~~ 186 (306)
T COG1752 145 ----GSLAEAVRASCSIPGVFPPVEIDG---------RLLVDGGVLNNVPVSLLR 186 (306)
T ss_pred ----CcHHHHHHHhcccCccCCCEEECC---------EEEEecCccCCccHHHHH
Confidence 239999999999999999999874 379999999999995554
No 29
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=99.91 E-value=5.2e-24 Score=206.67 Aligned_cols=167 Identities=14% Similarity=0.271 Sum_probs=128.2
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
...|||+|||+||+|++||+++|++. | +++...||.|+|||+||++|++++++ .+++++.+++...
T Consensus 12 ~~gLvFsGGGfrGiYHvGVl~aL~E~-----g--p~ll~~~d~IaGtSAGALvAAl~asG-------~s~de~~r~~~~~ 77 (382)
T cd07219 12 PHSISFSGSGFLSFYQAGVVDALRDL-----A--PRMLETAHRVAGTSAGSVIAALVVCG-------ISMDEYLRVLNVG 77 (382)
T ss_pred CceEEEcCcHHHHHHHHHHHHHHHhc-----C--CcccccCCeEEEEcHHHHHHHHHHhC-------CCHHHHHHHHHHH
Confidence 46799999999999999999999885 2 23456799999999999999999998 4677777765433
Q ss_pred CCCcCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDL 176 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~ 176 (402)
.... .+ . +++ ++.+.+. .+.+++.|++.+++..+.+...++.|++||+.+|+.++|+.+..
T Consensus 78 ~~~~-r~-~-~lG---------~~~p~~~l~~~lr~~L~~~LP~da~e~~~g~L~IsaTdl~tGknv~fS~F~S------ 139 (382)
T cd07219 78 VAEV-RK-S-FLG---------PLSPSCKMVQMMRQFLYRVLPEDSYKVATGKLHVSLTRVTDGENVVVSEFTS------ 139 (382)
T ss_pred HHHH-HH-h-hcc---------CccccchHHHHHHHHHHhhCcHhhHHhCCCcEEEEEEECCCCCEEEEeccCC------
Confidence 2221 00 0 111 1112221 15678888888888888888899999999999999999998754
Q ss_pred CchHHHHHHhhcCCCCCC--CceeecCCCCCCCcceeeeeeccccCCchHH
Q 015720 177 DAQLADIAIGTSAAPTYF--PAHYFKNPDEHGTLKEFNLIDGGVAANNPTL 225 (402)
Q Consensus 177 ~~~l~da~~ASsAaP~yF--pp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~ 225 (402)
+..+.+|++|||++|+|+ .|..++ | ..|||||+.+|+|+.
T Consensus 140 ~~dLidAV~AScaIP~y~G~~Pp~ir-----G----~~yVDGGvsdnlPv~ 181 (382)
T cd07219 140 KEELIEALYCSCFVPVYCGLIPPTYR-----G----VRYIDGGFTGMQPCS 181 (382)
T ss_pred cchHHHHHHHHccCccccCCcCeEEC-----C----EEEEcCCccCCcCcc
Confidence 357999999999999985 355665 3 379999999999983
No 30
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=99.90 E-value=4.1e-23 Score=193.25 Aligned_cols=166 Identities=19% Similarity=0.259 Sum_probs=122.5
Q ss_pred EEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhC
Q 015720 19 TILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHG 98 (402)
Q Consensus 19 ~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~ 98 (402)
--|||+|||.||+|++||+++|+++ | +.+...||.|+|||+||++|+.++++. +.+++.+...+++
T Consensus 5 ~~LsfsGGG~rG~yh~GVl~~L~e~-----g--~~l~~~~~~i~G~SAGAl~aa~~a~g~-------~~~~~~~~~~~~a 70 (249)
T cd07220 5 WNISFAGCGFLGVYHVGVASCLLEH-----A--PFLVANARKIYGASAGALTATALVTGV-------CLGECGASVIRVA 70 (249)
T ss_pred ceEEEeChHHHHHHHHHHHHHHHhc-----C--CcccccCCeEEEEcHHHHHHHHHHcCC-------CHHHHHHHHHHHH
Confidence 4599999999999999999999987 2 234566899999999999999999983 4555544444432
Q ss_pred CCcCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCC
Q 015720 99 PKIFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLD 177 (402)
Q Consensus 99 ~~iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~ 177 (402)
++. +.. +++ .+.+.|+ .+.+++.+.+.+++........++.|++|++.+++.++|+++..+
T Consensus 71 ~~~--r~~-~~g---------~~~~~~~l~~~l~~~l~~~lp~~a~~~~~~~l~is~T~~~tg~~~~~s~f~s~------ 132 (249)
T cd07220 71 KEA--RKR-FLG---------PLHPSFNLVKILRDGLLRTLPENAHELASGRLGISLTRVSDGENVLVSDFNSK------ 132 (249)
T ss_pred HHh--hHh-hcc---------CccccchHHHHHHHHHHHHCChhhHHHCCCcEEEEEEECCCCCEEEEecCCCc------
Confidence 111 000 111 0111111 235777788888887777777899999999999999999987643
Q ss_pred chHHHHHHhhcCCCCCC--CceeecCCCCCCCcceeeeeeccccCCchHH
Q 015720 178 AQLADIAIGTSAAPTYF--PAHYFKNPDEHGTLKEFNLIDGGVAANNPTL 225 (402)
Q Consensus 178 ~~l~da~~ASsAaP~yF--pp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~ 225 (402)
..+.+|++|||++|.|+ .|..++ | ..|+|||+.+|.|+.
T Consensus 133 ~dLi~al~AScsiP~~~g~~P~~~~-----G----~~yvDGGvsdnlPv~ 173 (249)
T cd07220 133 EELIQALVCSCFIPVYCGLIPPTLR-----G----VRYVDGGISDNLPQY 173 (249)
T ss_pred chHHHHHHHhccCccccCCCCeeEC-----C----EEEEcCCcccCCCCC
Confidence 46899999999999885 344554 3 379999999999983
No 31
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=99.89 E-value=1e-23 Score=188.87 Aligned_cols=185 Identities=24% Similarity=0.275 Sum_probs=104.1
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|+|+|||+||++++|+|++| . ......||+|+|||+||++|++++.+.... ...+.+.+++......
T Consensus 1 LvlsGGG~rg~~~~G~l~~L----~------~~~~~~~d~i~GtS~Gal~a~~~~~~~~~~---~~~~~~~~~~~~~~~~ 67 (204)
T PF01734_consen 1 LVLSGGGSRGAYQAGVLKAL----G------QGLGERFDVISGTSAGALNAALLALGYDPD---ESLDQFYDLWRNLFFS 67 (204)
T ss_dssp EEE---CCGCCCCHHHHHHH----C------CTGCCT-SEEEEECCHHHHHHHHHTC-TCC---CCCCHHCCHHHHHHHC
T ss_pred CEEcCcHHHHHHHHHHHHHH----h------hhhCCCccEEEEcChhhhhHHHHHhCCCHH---HHHHHHHHHHHhhccc
Confidence 89999999999999999998 1 145788999999999999999999874221 1224444444433221
Q ss_pred cC-CccccchhhhHHHHHH-hhhcCCCChHHHHHHHHHHcccccccccCCceEEe-----------------eecCCCCc
Q 015720 101 IF-PQLRGMLANSVVNLVR-ALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIP-----------------TFDIKKLQ 161 (402)
Q Consensus 101 iF-~~~~~~~~~~~~~~~~-~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~-----------------a~d~~~~~ 161 (402)
.. .... ........... ...+..|+...+++.+++.++.....+........ ........
T Consensus 68 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (204)
T PF01734_consen 68 SNLMKRR-RPRKAFRRLRGLFGGSGLFDSEPLRDWLRRVLGDLTLEEFSARLPRAIGAADDFTTRSRSIFQSPSSPFRAS 146 (204)
T ss_dssp CCTH-------HHT-------SSS-SS--HHHHHHHHHHHCCHCHHHHCTCECCC-EE--------------EEECCCCE
T ss_pred ccccccc-ccccccccccccccCccchhHHHHHHHHHHhccccCHHHhhhcccccccccccccccccccccccccccccc
Confidence 11 0000 00000000111 12457789999999999999876654433221111 00000001
Q ss_pred ceeecCCCCCCCCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHH
Q 015720 162 PTIFSSFQVAASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAI 228 (402)
Q Consensus 162 p~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al 228 (402)
...............+..+++|++||+|+|++|+|+.+++. .|+|||+.+|+|+..|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~l~~a~~AS~a~P~~~~p~~~~g~---------~~~DGG~~~n~P~~~a~ 204 (204)
T PF01734_consen 147 SNNFNESRSRYDFDPDVPLWDAVRASSAIPGIFPPVKIDGE---------YYIDGGILDNNPIEAAL 204 (204)
T ss_dssp CCEEECCCCCTTCCCTSBHHHHHHHCCHSTTTSTTEEETS----------EEEEGGGCS---GGGC-
T ss_pred ccccccccccccCCCcchHHHhhChhccccccCCCEEECCE---------EEEecceeeccccccCC
Confidence 11111111112234578999999999999999999999742 79999999999997654
No 32
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=99.88 E-value=2.2e-22 Score=187.53 Aligned_cols=157 Identities=19% Similarity=0.255 Sum_probs=120.3
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|||+|||.+|+||+|||++|+|+ .+...|+.|+|||+||++|++++++ .+.+++.+++.++..+
T Consensus 2 lsfsggG~lg~yh~GVl~~L~e~---------gi~~~~~~i~G~SAGAl~aa~~asg-------~~~~~~~~~~~~~~~~ 65 (233)
T cd07224 2 FSFSAAGLLFPYHLGVLSLLIEA---------GVINETTPLAGASAGSLAAACSASG-------LSPEEALEATEELAED 65 (233)
T ss_pred eeecchHHHHHHHHHHHHHHHHc---------CCCCCCCEEEEEcHHHHHHHHHHcC-------CCHHHHHHHHHHHHHH
Confidence 89999999999999999999986 3444589999999999999999998 4567777766665433
Q ss_pred cCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccC-CceEEeeecCCCC-cceeecCCCCCCCCCCC
Q 015720 101 IFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTL-TNVAIPTFDIKKL-QPTIFSSFQVAASPDLD 177 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~-~~l~V~a~d~~~~-~p~~f~~~~~~~~~~~~ 177 (402)
.+... ..++ ...+++.|+++++........ .++.|.+|++.++ +.++++.+..+
T Consensus 66 ~~~~~-----------------~~~~~~~~l~~~l~~~lp~d~~e~~~~~~l~i~~T~~~~~~~~~~v~~f~~~------ 122 (233)
T cd07224 66 CRSNG-----------------TAFRLGGVLRDELDKTLPDDAHERCNRGRIRVAVTQLFPVPRGLLVSSFDSK------ 122 (233)
T ss_pred HHhcC-----------------CcccHHHHHHHHHHHHcCcHHHHHhcCCCEEEEEEecccCCCceEEEecCCc------
Confidence 22211 1111 245677888888877666556 7899999999876 46666655432
Q ss_pred chHHHHHHhhcCCCCCCC---ceeecCCCCCCCcceeeeeeccccCCchHH
Q 015720 178 AQLADIAIGTSAAPTYFP---AHYFKNPDEHGTLKEFNLIDGGVAANNPTL 225 (402)
Q Consensus 178 ~~l~da~~ASsAaP~yFp---p~~i~~~~~~G~~~~~~~iDGGv~~NnP~~ 225 (402)
..+.+|++|||++|+||+ |+.++ | ..|+|||+.+|.|..
T Consensus 123 ~~l~~al~AS~~iP~~~~p~~~v~~~-----G----~~~vDGG~~~~~P~~ 164 (233)
T cd07224 123 SDLIDALLASCNIPGYLAPWPATMFR-----G----KLCVDGGFALFIPPT 164 (233)
T ss_pred chHHHHHHHhccCCcccCCCCCeeEC-----C----EEEEeCCcccCCCCC
Confidence 358999999999999997 46765 3 379999999999984
No 33
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=99.85 E-value=3.5e-20 Score=182.15 Aligned_cols=184 Identities=20% Similarity=0.231 Sum_probs=134.6
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
+...|+|+|||++|++++||+++|+++ .-.+|+|+|||+|||+|++++.. +.+|+.+++..
T Consensus 82 GrtAlvlsGGg~~G~~h~Gv~kaL~e~-----------gl~p~~i~GtS~Gaivaa~~a~~--------~~~e~~~~l~~ 142 (391)
T cd07229 82 GRTALVLQGGSIFGLCHLGVVKALWLR-----------GLLPRIITGTATGALIAALVGVH--------TDEELLRFLDG 142 (391)
T ss_pred CCEEEEecCcHHHHHHHHHHHHHHHHc-----------CCCCceEEEecHHHHHHHHHHcC--------CHHHHHHHHhc
Confidence 468999999999999999999999987 34578999999999999999974 56787777653
Q ss_pred hCCC--cCCc----------cccchhhhHHHHHHhh-hcCCCChHHHHHHHHHHccccccccc----CCceEEeeecCC-
Q 015720 97 HGPK--IFPQ----------LRGMLANSVVNLVRAL-MGTKYDGKYLHKVIKENLKDTKLHQT----LTNVAIPTFDIK- 158 (402)
Q Consensus 97 ~~~~--iF~~----------~~~~~~~~~~~~~~~l-~~~~y~~~~l~~~l~~~~~~~~l~d~----~~~l~V~a~d~~- 158 (402)
..-. .|.. ..+++......+.+.+ .+..+|.+.|++.+++.+|+.++.+. .+.+.|+.+...
T Consensus 143 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~l~~G~l~D~~~l~~~lr~~lgd~TFeEAy~rTgriLnItv~~~~~ 222 (391)
T cd07229 143 DGIDLSAFNRLRGKKSLGYSGYGWLGTLGRRIQRLLREGYFLDVKVLEEFVRANLGDLTFEEAYARTGRVLNITVAPSAV 222 (391)
T ss_pred cchhhhhhhhhccccccccccccccchHHHHHHHHHcCCCcccHHHHHHHHHHHcCCCcHHHHHHhhCCEEEEEEECCCC
Confidence 2111 1111 0011110111122223 35689999999999999999998875 456777777755
Q ss_pred CCcceeecCCCCCCCCCCCchHHHHHHhhcCCCCCCC-ceeecCCCCCCCccee----------eeeeccccCCchH
Q 015720 159 KLQPTIFSSFQVAASPDLDAQLADIAIGTSAAPTYFP-AHYFKNPDEHGTLKEF----------NLIDGGVAANNPT 224 (402)
Q Consensus 159 ~~~p~~f~~~~~~~~~~~~~~l~da~~ASsAaP~yFp-p~~i~~~~~~G~~~~~----------~~iDGGv~~NnP~ 224 (402)
.+.|.+|+...+| |+.||.|++||||.|+.|+ |+.+-.+|.+|+...+ ...||.+....|.
T Consensus 223 ~~~p~LLNylTaP-----nVlIwsAv~aS~a~p~~~~~~~~L~~Kd~~G~ivp~~~~~~~~~~~~~~dgs~~~DlP~ 294 (391)
T cd07229 223 SGSPNLLNYLTAP-----NVLIWSAALASNASSAALYRSVTLLCKDETGSIVPWPPVQVLFFRSWRGANYSERESPL 294 (391)
T ss_pred CCCCeeeecCCCC-----CchHHHHHHHHcCCccccCCCceEEEECCCCCEeeCCCcccccccccccCCCccccChH
Confidence 5678888765554 7999999999999998886 9888877777743211 2458988889998
No 34
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=99.85 E-value=7.6e-21 Score=183.77 Aligned_cols=166 Identities=19% Similarity=0.179 Sum_probs=131.0
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
.--|||+|||.+|+||+||+++|.++- +.+....+-|+|||+|||+|++++.+ .+.+++.+...++
T Consensus 9 ~~~LsfSGgGflG~yHvGV~~~L~e~~-------p~ll~~~~~iaGaSAGAL~aa~~a~g-------~~~~~~~~~i~~i 74 (405)
T cd07223 9 GWNLSFSGAGYLGLYHVGVTECLRQRA-------PRLLQGARRIYGSSSGALNAVSIVCG-------KSADFCCSNLLGM 74 (405)
T ss_pred CEEEEEeCcHHHHHHHHHHHHHHHHhC-------chhhccCCeeeeeCHHHHHHHHHHhC-------CCHHHHHHHHHHH
Confidence 467999999999999999999999872 23445567899999999999999998 4566555443333
Q ss_pred CCCcCCccccchhhhHHHHHHhhhcCCCC-hHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRALMGTKYD-GKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDL 176 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~l~~~~y~-~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~ 176 (402)
.+++=.. ..+.+++.|+ .+.+++.|++++.+........++.|.+|++.+++.++.++|.++
T Consensus 75 a~~~r~~------------~lG~~~p~f~l~~~lr~~L~~~LP~daHe~~sgrL~ISlT~l~~gknvlvS~F~Sr----- 137 (405)
T cd07223 75 VKHLERL------------SLGIFHPAYAPIEHIRQQLQESLPPNIHILASQRLGISMTRWPDGRNFIVTDFATR----- 137 (405)
T ss_pred HHHhhhh------------ccCCCCccccHHHHHHHHHHHhCCchhhHHhCCceEEEEEEccCCceEEecCCCCH-----
Confidence 2211000 0123455565 577899999999998888888899999999999999999888754
Q ss_pred CchHHHHHHhhcCCCCC--CCceeecCCCCCCCcceeeeeeccccCCchH
Q 015720 177 DAQLADIAIGTSAAPTY--FPAHYFKNPDEHGTLKEFNLIDGGVAANNPT 224 (402)
Q Consensus 177 ~~~l~da~~ASsAaP~y--Fpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~ 224 (402)
..|.+|++|||.+|+| |.|..++ | ..|||||+.+|.|.
T Consensus 138 -edLIqALlASc~IP~y~g~~P~~~r-----G----~~yVDGGvsnNLP~ 177 (405)
T cd07223 138 -DELIQALICTLYFPFYCGIIPPEFR-----G----ERYIDGALSNNLPF 177 (405)
T ss_pred -HHHHHHHHHhccCccccCCCCceEC-----C----EEEEcCcccccCCC
Confidence 6799999999999999 8888886 3 37999999999996
No 35
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=99.84 E-value=1.8e-20 Score=177.91 Aligned_cols=146 Identities=18% Similarity=0.256 Sum_probs=106.8
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
+...|+|+|||+||++++|||++|+++ .-.+|+|+|||+||++|++++.+. .+|+
T Consensus 68 g~~aLvlsGGg~~g~~h~Gvl~aL~e~-----------~l~~~~i~GtSaGAi~aa~~~~~~--------~~El------ 122 (298)
T cd07206 68 GRTALMLSGGASLGLFHLGVVKALWEQ-----------DLLPRVISGSSAGAIVAALLGTHT--------DEEL------ 122 (298)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEEcHHHHHHHHHHcCC--------cHHH------
Confidence 457899999999999999999999886 234799999999999999999762 2333
Q ss_pred hCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCC
Q 015720 97 HGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDL 176 (402)
Q Consensus 97 ~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~ 176 (402)
+... .+++..+ .+.+.+.|++++..++++..|-+|... .
T Consensus 123 -----~gdl-----------------------Tf~EA~~---------~tgr~lnI~vt~~~~~~~~~lln~~ts----p 161 (298)
T cd07206 123 -----IGDL-----------------------TFQEAYE---------RTGRIINITVAPAEPHQNSRLLNALTS----P 161 (298)
T ss_pred -----HcCC-----------------------CHHHHHH---------hcCCEEEEEEEECCCCCceEEecccCC----C
Confidence 1110 0111111 234567788888877776666565432 3
Q ss_pred CchHHHHHHhhcCCCCCCCceeecCCCCCCCc----ceeeeeeccccCCchHHHHH
Q 015720 177 DAQLADIAIGTSAAPTYFPAHYFKNPDEHGTL----KEFNLIDGGVAANNPTLVAI 228 (402)
Q Consensus 177 ~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~----~~~~~iDGGv~~NnP~~~al 228 (402)
++.+|+|++||||+|++|+|+.+..+|.+|+. .+..|+|||+..|.|...+.
T Consensus 162 nv~i~sAv~AS~slP~~f~pv~l~~k~~~g~~~p~~~g~~~~DGgv~~~iPv~~l~ 217 (298)
T cd07206 162 NVLIWSAVLASCAVPGVFPPVMLMAKNRDGEIVPYLPGRKWVDGSVSDDLPAKRLA 217 (298)
T ss_pred chHHHHHHhhccCccccccCeEEEeecCCCccccCCCCCcccCCCcCcchHHHHHH
Confidence 67899999999999999999998655544431 12479999999999996553
No 36
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=99.83 E-value=1.3e-19 Score=186.68 Aligned_cols=163 Identities=24% Similarity=0.344 Sum_probs=125.6
Q ss_pred EEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhC
Q 015720 19 TILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHG 98 (402)
Q Consensus 19 ~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~ 98 (402)
..|+|.|||+||+.++|||++|||+ ...+|+|+|||.||+++++++... ++...+.+.
T Consensus 840 IgLVLGGGGARG~ahiGvl~ALeE~-----------GIPvD~VGGTSIGafiGaLYA~e~----------d~~~v~~ra- 897 (1158)
T KOG2968|consen 840 IGLVLGGGGARGAAHIGVLQALEEA-----------GIPVDMVGGTSIGAFIGALYAEER----------DLVPVFGRA- 897 (1158)
T ss_pred EEEEecCcchhhhhHHHHHHHHHHc-----------CCCeeeeccccHHHhhhhhhhccC----------cchHHHHHH-
Confidence 4699999999999999999999997 356899999999999999998542 222222221
Q ss_pred CCcCCccccchhhhHHHHHHhh------hcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCC
Q 015720 99 PKIFPQLRGMLANSVVNLVRAL------MGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAA 172 (402)
Q Consensus 99 ~~iF~~~~~~~~~~~~~~~~~l------~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~ 172 (402)
++.|. .+.+++..+ ..+.|+...+..-+.+.|||..+.|++.+.++.+||+++....+.++
T Consensus 898 k~f~~--------~mssiw~~llDLTyP~tsmftGh~FNrsI~~~Fgd~~IEDlWi~yfciTTdIt~S~mriH~~----- 964 (1158)
T KOG2968|consen 898 KKFAG--------KMSSIWRLLLDLTYPITSMFTGHEFNRSIHSTFGDVLIEDLWIPYFCITTDITSSEMRVHRN----- 964 (1158)
T ss_pred HHHHH--------HHHHHHHHHHhccccchhccchhhhhhHHHHHhcccchhhhhheeeecccccchhhhhhhcC-----
Confidence 11111 111222222 23567888999999999999999999999999999998877666654
Q ss_pred CCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHH
Q 015720 173 SPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAI 228 (402)
Q Consensus 173 ~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al 228 (402)
..+|..+|||+++-+|.||.. +.+ +| ..++|||..+|-|+..+.
T Consensus 965 -----G~~WrYvRASMsLaGylPPlc-dp~--dG----hlLlDGGYvnNlPadvmr 1008 (1158)
T KOG2968|consen 965 -----GSLWRYVRASMSLAGYLPPLC-DPK--DG----HLLLDGGYVNNLPADVMR 1008 (1158)
T ss_pred -----CchHHHHHhhccccccCCCCC-CCC--CC----CEEecccccccCcHHHHH
Confidence 679999999999999999985 332 25 489999999999995543
No 37
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=99.83 E-value=5.4e-20 Score=174.78 Aligned_cols=146 Identities=19% Similarity=0.282 Sum_probs=112.5
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
+...|+|+|||++|++++||+++|+++ .-.+|+|+|||+||++|++++.. +.+|+.+++
T Consensus 67 G~~aLvlsGGg~~g~~h~GVlkaL~e~-----------gl~p~~i~GsSaGAivaa~~~~~--------t~~El~~~~-- 125 (323)
T cd07231 67 GRTALLLSGGAALGTFHVGVVRTLVEH-----------QLLPRVIAGSSVGSIVCAIIATR--------TDEELQSFF-- 125 (323)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHHHHHc-----------CCCCCEEEEECHHHHHHHHHHcC--------CHHHHHHHH--
Confidence 357899999999999999999999986 23579999999999999999874 456666554
Q ss_pred hCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHccccccccc----CCceEEeeecCCCC-cceeecCCCCC
Q 015720 97 HGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQT----LTNVAIPTFDIKKL-QPTIFSSFQVA 171 (402)
Q Consensus 97 ~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~----~~~l~V~a~d~~~~-~p~~f~~~~~~ 171 (402)
++.+|+.++.|. .+.+.|+.++...+ .|.+++...+|
T Consensus 126 --------------------------------------~~~~gd~TF~Eay~~tgr~lnI~v~~~~~~~~~~lln~~T~P 167 (323)
T cd07231 126 --------------------------------------RALLGDLTFQEAYDRTGRILGITVCPPRKSEPPRLLNYLTSP 167 (323)
T ss_pred --------------------------------------HHHcCcccHHHHHhccCCEEEEEEecccCCCCceeeccCCCC
Confidence 223444444432 56777887777665 56666654443
Q ss_pred CCCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcce----------eeeeeccccCCchHHH
Q 015720 172 ASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKE----------FNLIDGGVAANNPTLV 226 (402)
Q Consensus 172 ~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~----------~~~iDGGv~~NnP~~~ 226 (402)
|+.+|.|++||||.|++|+|+.+-.+|.+|+... ..++||++..+.|...
T Consensus 168 -----nv~I~sAv~aS~a~P~if~~~~L~~Kd~~G~ivp~~~~~~~~~~~~~~DGs~~~dlP~~r 227 (323)
T cd07231 168 -----HVVIWSAVAASCAFPGLFEAQELMAKDRFGEIVPYHPPGKVSSPRRWRDGSLEQDLPMQQ 227 (323)
T ss_pred -----CcHHHHHHHHHcCChhhccceeEEEECCCCCEeeccCCCccccccccccCcccccCchHH
Confidence 7899999999999999999999777776675432 3599999999999844
No 38
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.82 E-value=1.1e-19 Score=165.93 Aligned_cols=166 Identities=19% Similarity=0.231 Sum_probs=109.7
Q ss_pred eEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 18 ITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
...|+++|||+||++++|||+++... -..+||+|+|||+||..++.+.+.+ +.++ ....--|...
T Consensus 11 kvaLV~EGGG~RgifTAGVLD~fl~a----------~~~~f~~~~GvSAGA~n~~aYls~Q----~gra-~~~~~~yt~d 75 (292)
T COG4667 11 KVALVLEGGGQRGIFTAGVLDEFLRA----------NFNPFDLVVGVSAGALNLVAYLSKQ----RGRA-RRVIVEYTTD 75 (292)
T ss_pred cEEEEEecCCccceehHHHHHHHHHh----------ccCCcCeeeeecHhHHhHHHHhhcC----CchH-HHHHHHhhcc
Confidence 57899999999999999999999854 1467999999999999999887763 2222 2222223221
Q ss_pred CCCcCCccccchhhhHHHHHHhhh-cCCCChHHHHHHHHH---HcccccccccCCceEEeeecCCCCcceeecCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRALM-GTKYDGKYLHKVIKE---NLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAAS 173 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~l~-~~~y~~~~l~~~l~~---~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~ 173 (402)
++.|... + .+. +..++-+.+-+.+-+ -|...+..+...+.++.+++..+++...+..-
T Consensus 76 -~ry~~~~----~--------~vr~gn~~n~d~~~~~~~~~~~~fD~~tf~~~~~k~~~~~~~~~~g~~~~~~~~----- 137 (292)
T COG4667 76 -RRYFGPL----S--------FVRGGNYFNLDWAFEETPQKLFPFDFDTFSQDKGKFFYMATCRQDGEAVYYFLP----- 137 (292)
T ss_pred -hhhcchh----h--------hhccCcccchHHHHhhccCcCCCccHHHHhcccCCeEEEEEeccCCccceeecc-----
Confidence 1223221 1 111 233333322222211 12233455566778888888888876554331
Q ss_pred CCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHH
Q 015720 174 PDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVA 227 (402)
Q Consensus 174 ~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~a 227 (402)
....+-+++|||||+|+|-++++|++. .|+|||+.+..|+-.|
T Consensus 138 --~~~~~m~viRASSaiPf~~~~V~i~G~---------~YlDGGIsdsIPvq~a 180 (292)
T COG4667 138 --DVFNWLDVIRASSAIPFYSEGVEINGK---------NYLDGGISDSIPVKEA 180 (292)
T ss_pred --cHHHHHHHHHHhccCCCCCCCeEECCE---------ecccCcccccccchHH
Confidence 235688999999999988899999743 7999999999999444
No 39
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=99.78 E-value=9.2e-18 Score=176.37 Aligned_cols=203 Identities=20% Similarity=0.231 Sum_probs=135.4
Q ss_pred EEEEEeCCchhHHHHHHHHHHHHHHhhhhc------------------------CCCCCCCCCccEEEecchHHHHHHHH
Q 015720 19 TILSIDGGGIRGIIPGVILAYLESQLQELD------------------------GEDARLADYFDVIAGTSTGGLLTAML 74 (402)
Q Consensus 19 ~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~------------------------g~~~~~~~~fDli~GTStG~iia~~l 74 (402)
-.|+|.|||.|++|+.||+++|-+..+... +........||+|+|||+|||+|++|
T Consensus 4 lalVl~GG~slA~y~~GV~~ei~~l~~~~~~~~~~~~~~~~~~~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~l 83 (739)
T TIGR03607 4 LALVMYGGVSLAVYMHGVTKEINRLVRASRAYHGYPDEASAGTEAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLL 83 (739)
T ss_pred EEEEecCcHHHHHHHHHHHHHHHHHhhhhcccccccccccccchhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHH
Confidence 459999999999999999999987554311 00113357799999999999999999
Q ss_pred hCCCCCCCccCCHhHHHHHHHHhCC--CcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccc------ccccc
Q 015720 75 TAPSEQNRPMYAAKDIVPFYIRHGP--KIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDT------KLHQT 146 (402)
Q Consensus 75 ~~~~~~~~~~~s~~e~~~~y~~~~~--~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~------~l~d~ 146 (402)
+++.. ..++.+++.++|.+... +.+......+. +..-..+.|+++.++++|.+.+++. +..+.
T Consensus 84 A~~~~---~g~~~~~L~~~W~~~~d~~~lLd~~~~~~~------~~~~~~sLl~G~~l~~~L~~~L~~~~~~~~~~~~~l 154 (739)
T TIGR03607 84 AYALA---YGADLDPLRDLWLELADIDALLRPDAKAWP------RLRRPGSLLDGEYFLPLLLDALAAMVRAGPAGPSLL 154 (739)
T ss_pred Hcccc---cCCCHHHHHHHHHhcccHHhhcChhhhccc------cccCCccccccHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 98431 12578999999887643 22221100000 0000234588999999999988654 34444
Q ss_pred C-----CceEEeeecCCCCccee-ecCCC---------------C-----CCC----CCCCchHHHHHHhhcCCCCCCCc
Q 015720 147 L-----TNVAIPTFDIKKLQPTI-FSSFQ---------------V-----AAS----PDLDAQLADIAIGTSAAPTYFPA 196 (402)
Q Consensus 147 ~-----~~l~V~a~d~~~~~p~~-f~~~~---------------~-----~~~----~~~~~~l~da~~ASsAaP~yFpp 196 (402)
. ..++||+||+ .|+... +.++. . ... ......|..|+||||++|++|+|
T Consensus 155 p~~~~~~dL~VTaTDl-~G~~~~l~dd~~~~~~e~~hr~~f~F~~~~~~~~~~~d~~~~~~~~lA~AaRaSaSfP~aF~P 233 (739)
T TIGR03607 155 PTGTRPLDLFVTATDL-RGRSTRLFDDDGTVVEEREHRGVFRFTEAGRAGGRLSDFDAANAPRLAFAARATASFPGAFPP 233 (739)
T ss_pred ccCCCCccEEEEEEcC-CCcEEEeecCCCcccccccccceeeeecccCCCCCCccccccccHHHHHHHHHhcCCCcccCc
Confidence 3 5689999999 554322 22221 0 000 11237899999999999999999
Q ss_pred eeecCCC-------------------------CCCC-cceeeeeeccccCCchHHHHHHHH
Q 015720 197 HYFKNPD-------------------------EHGT-LKEFNLIDGGVAANNPTLVAISEM 231 (402)
Q Consensus 197 ~~i~~~~-------------------------~~G~-~~~~~~iDGGv~~NnP~~~al~ea 231 (402)
+++...| ..+. .....|+|||+..|-|...++.+.
T Consensus 234 v~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDGGvldN~Pl~pal~~i 294 (739)
T TIGR03607 234 SRLAEIDDVLARRFLPWGGRDAFLHPDFPDYAELGTTPRPRYVVDGGVLDNRPFAPALEAI 294 (739)
T ss_pred eehhhhhHHHHhccCCCCccccccccccccccccCCCccceEEeecccccCcchHHHHHHH
Confidence 9764210 0111 134689999999999999998763
No 40
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=99.77 E-value=1.2e-18 Score=152.36 Aligned_cols=139 Identities=25% Similarity=0.330 Sum_probs=100.5
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHhCCC
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRHGPK 100 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~~~~ 100 (402)
|+|+|||+||++++|+|++|+++ .+.+.||.++|||+||++|+.++ + .
T Consensus 1 l~~~GGg~~~~~~~gvl~~l~~~---------~~~~~~~~~~G~SaGa~~~~~~~-p----------------------~ 48 (155)
T cd01819 1 LSFSGGGFRGMYHAGVLSALAER---------GLLDCVTYLAGTSGGAWVAATLY-P----------------------P 48 (155)
T ss_pred CEEcCcHHHHHHHHHHHHHHHHh---------CCccCCCEEEEEcHHHHHHHHHh-C----------------------h
Confidence 68999999999999999999987 34468999999999999999987 1 0
Q ss_pred cCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCCCchH
Q 015720 101 IFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDLDAQL 180 (402)
Q Consensus 101 iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~~~~l 180 (402)
.+ .+. ....+.+. .+...++.|.+++..+|++.+|..... ...+
T Consensus 49 ~~-----~~~-----------------~~~~~~~~--------~~~~~~~~i~~T~~~tG~~~~~~~~~~------~~~~ 92 (155)
T cd01819 49 SS-----SLD-----------------NKPRQSLE--------EALSGKLWVSFTPVTAGENVLVSRFVS------KEEL 92 (155)
T ss_pred hh-----hhh-----------------hhhhhhhH--------HhcCCCeEEEEEEcCCCcEEEEecccc------chHH
Confidence 00 000 00001111 345678889999999999999875432 3468
Q ss_pred HHHHHhhcCCCCCCCceeecCCC---CCCCcceeeeeeccccCCchHHHH
Q 015720 181 ADIAIGTSAAPTYFPAHYFKNPD---EHGTLKEFNLIDGGVAANNPTLVA 227 (402)
Q Consensus 181 ~da~~ASsAaP~yFpp~~i~~~~---~~G~~~~~~~iDGGv~~NnP~~~a 227 (402)
+++++|||+.|++|+++...... ..++.++..|+|||+.+|+|+...
T Consensus 93 ~~av~aS~s~P~~f~~v~~~~~~~~~~~~~~~g~~lVDGG~~~~iP~~~~ 142 (155)
T cd01819 93 IRALFASGSWPSYFGLIPPAELYTSKSNLKEKGVRLVDGGVSNNLPAPVL 142 (155)
T ss_pred HHHHhHHhhhhhhcCCcccccccccccccccCCeEEeccceecCcCCccc
Confidence 99999999999999987551000 001112358999999999999655
No 41
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=99.53 E-value=3.9e-14 Score=139.74 Aligned_cols=180 Identities=18% Similarity=0.301 Sum_probs=131.2
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
|..+|+|+||+.-|++|+|||+.|.++ .+ .+.+|+|+|+|||+|+.++.. +-+|+..++..
T Consensus 173 GrTAL~LsGG~tFGlfH~GVlrtL~e~---------dL--lP~IIsGsS~GaivAsl~~v~--------~~eEl~~Ll~~ 233 (543)
T KOG2214|consen 173 GRTALILSGGATFGLFHIGVLRTLLEQ---------DL--LPNIISGSSAGAIVASLVGVR--------SNEELKQLLTN 233 (543)
T ss_pred CceEEEecCCchhhhhHHHHHHHHHHc---------cc--cchhhcCCchhHHHHHHHhhc--------chHHHHHHhcc
Confidence 468999999999999999999999876 22 357999999999999999975 56787777654
Q ss_pred hC---CCcCCccccchhhhHHHHHHhh-hcCCCChHHHHHHHHHHcccccccccC----C--ceEEeeecCCCCcceeec
Q 015720 97 HG---PKIFPQLRGMLANSVVNLVRAL-MGTKYDGKYLHKVIKENLKDTKLHQTL----T--NVAIPTFDIKKLQPTIFS 166 (402)
Q Consensus 97 ~~---~~iF~~~~~~~~~~~~~~~~~l-~~~~y~~~~l~~~l~~~~~~~~l~d~~----~--~l~V~a~d~~~~~p~~f~ 166 (402)
.- -.||..+.+ + ++..+-+.+ .+..+|...+...+++..|+.++.+.. + .++|+..+. .+.|.+..
T Consensus 234 ~~~~~~~if~dd~~--n-~~~~ikr~~~~G~~~Di~~l~~~~~~~~~~lTFqEAY~rTGrIlNItV~p~s~-~e~P~lLN 309 (543)
T KOG2214|consen 234 FLHSLFNIFQDDLG--N-LLTIIKRYFTQGALFDISHLACVMKKRLGNLTFQEAYDRTGRILNIVVPPSSK-SEPPRLLN 309 (543)
T ss_pred chHhhhhhhcCcch--h-HHHHHHHHHhcchHHHHHHHHHHHHHHhcchhHHHHHHhhCceEEEEECcccc-CCChhHhh
Confidence 32 234555432 1 222222223 467899999999999999988877653 2 344444443 46788877
Q ss_pred CCCCCCCCCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCc-------ceeeeeeccccCCchH
Q 015720 167 SFQVAASPDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTL-------KEFNLIDGGVAANNPT 224 (402)
Q Consensus 167 ~~~~~~~~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~-------~~~~~iDGGv~~NnP~ 224 (402)
...+| |+.+|.|+.||||.|++|++..+-.+|..|+. ....+.||.+-..+|.
T Consensus 310 ylTaP-----nVLIWSAV~aScs~pgif~~~~Ll~Kd~t~ei~p~~~~~~~~r~~dgsl~~d~P~ 369 (543)
T KOG2214|consen 310 YLTAP-----NVLIWSAVCASCSVPGIFESTPLLAKDLTNEIEPFIVTFSEPRFMDGSLDNDLPY 369 (543)
T ss_pred ccCCC-----ceehhHHHHHhcccccccCccHHHHhhccCcEeeccCCccchhhccCcccccCcH
Confidence 66654 78999999999999999998766555433321 1235889999999998
No 42
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=99.28 E-value=6.9e-12 Score=127.35 Aligned_cols=192 Identities=22% Similarity=0.306 Sum_probs=137.5
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 17 LITILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
...++..+|||++ -..+|-.+|++... ..-.+||.+.|||+||++++.+... -+.+.+...|..
T Consensus 293 ~~~lv~~~G~G~~---~~q~l~~~e~~~~~------a~~~~f~w~~gtstg~~~~~~i~~~-------~s~d~v~~~y~~ 356 (503)
T KOG0513|consen 293 DDNLVLSDGGGIP---IIQVLYWIEKRCGT------AAWGYFDWFNGTSTGSTIMADIALD-------GSSDEVDRMYLQ 356 (503)
T ss_pred cceEEEecCCCCh---hHHHHHhHHHhccc------ccccccccccccCcCceeehhhhhc-------ccHHHHHHHHHH
Confidence 4578999999999 55667777766321 2357899999999999999988876 367778888887
Q ss_pred hCCCcCCccccchhhhHHHHHHhhhcCCCChHHHHHHHHHHcccccccccCC-ceEEeeecC--CCCcceeecCCCCCCC
Q 015720 97 HGPKIFPQLRGMLANSVVNLVRALMGTKYDGKYLHKVIKENLKDTKLHQTLT-NVAIPTFDI--KKLQPTIFSSFQVAAS 173 (402)
Q Consensus 97 ~~~~iF~~~~~~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~~~~~l~d~~~-~l~V~a~d~--~~~~p~~f~~~~~~~~ 173 (402)
+...+|... .+.|+..+++.++...||+....|... ++.|+.... .--+...+++|....+
T Consensus 357 ~k~~~F~~~----------------r~~~~~~~Ie~~~~~~~G~~~~~di~~~~~nl~~~~~~~~~~~l~~~rn~~~~i~ 420 (503)
T KOG0513|consen 357 MKDVVFDGL----------------RSEYNYVRIECAIDRLFGDAPSMDIDGIRLNLTGLLVDITGEELLMARNYRHNIN 420 (503)
T ss_pred HhHHhhhcc----------------cCCCCccchhhhhhcccCccccccCCcchhhhhhhhccccHHHHHHhhccccccc
Confidence 766666542 367899999999999999977777665 444443322 2223455666654321
Q ss_pred ----------------CCCCchHHHHHHhhcCCCCCCCceeecCCCCCCCcceeeeeeccccCCchHHHHHHHHHHHhhc
Q 015720 174 ----------------PDLDAQLADIAIGTSAAPTYFPAHYFKNPDEHGTLKEFNLIDGGVAANNPTLVAISEMTKHILK 237 (402)
Q Consensus 174 ----------------~~~~~~l~da~~ASsAaP~yFpp~~i~~~~~~G~~~~~~~iDGGv~~NnP~~~al~ea~~~~~~ 237 (402)
......+|++.|.|+++|.+|++.. | .|+|||..+|||.+..+.+...+-.
T Consensus 421 ~~~~~~~~~snde~~~~~~~~l~we~~rrss~a~~~f~~~~-------~-----~~~d~~~~~~n~~ld~~t~~~~~~~- 487 (503)
T KOG0513|consen 421 GGKPRSEEVSNDEALEEPAMQLVWEAKRRSSRAPPTFPPSE-------G-----KFIDGGLIANNPALDLMTDIHTYNK- 487 (503)
T ss_pred cccccccccccchhhhhHHHHHHHHHHHhccCCCCcccccc-------c-----ceeecCccCCCcchhhhHHHHHHHh-
Confidence 0123568999999999999998874 3 5999999999999999999755421
Q ss_pred CCCCCCCCCCCCCceEEEEecC
Q 015720 238 NPDFCPINPLDYTRFLVISIGT 259 (402)
Q Consensus 238 ~~~~~p~~~~~~~~~~vlSiGT 259 (402)
+.-+. ..--++||+||
T Consensus 488 --~~~~~----~~~~~~~s~gt 503 (503)
T KOG0513|consen 488 --DLNKR----NTMTIVVSAGT 503 (503)
T ss_pred --hhhhh----cccceEEeccC
Confidence 11011 13469999998
No 43
>KOG3773 consensus Adiponutrin and related vesicular transport proteins; predicted alpha/beta hydrolase [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.03 E-value=1.9e-10 Score=108.63 Aligned_cols=164 Identities=20% Similarity=0.230 Sum_probs=122.0
Q ss_pred EEEEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccE-EEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh
Q 015720 19 TILSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDV-IAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH 97 (402)
Q Consensus 19 ~iLsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDl-i~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~ 97 (402)
..||+.|.|.-|+|+.|+-.++-+...++ .-|. |+|.|+|+++|..+.++ .+.+++......+
T Consensus 7 ~~lSfsg~gFlg~yh~gaa~~l~~~ap~l---------l~~~~~~GaSagsl~a~~ll~~-------~~l~~a~~~l~~~ 70 (354)
T KOG3773|consen 7 MNLSFSGCGFLGIYHVGAANCLPRHAPRL---------LKDRSIAGASAGSLVACDLLCG-------LSLEEATGELYKM 70 (354)
T ss_pred hheeecCCceeEEEecchHHHHHHHHHHH---------hccccccCcccchHHHhhhhcc-------ccHHHHHHHHHHH
Confidence 56999999999999999999887775432 1244 89999999999999887 3567766654444
Q ss_pred CCCcCCccccchhhhHHHHHHhhhcCCC-ChHHHHHHHHHHcccccccccCCceEEeeecCCCCcceeecCCCCCCCCCC
Q 015720 98 GPKIFPQLRGMLANSVVNLVRALMGTKY-DGKYLHKVIKENLKDTKLHQTLTNVAIPTFDIKKLQPTIFSSFQVAASPDL 176 (402)
Q Consensus 98 ~~~iF~~~~~~~~~~~~~~~~~l~~~~y-~~~~l~~~l~~~~~~~~l~d~~~~l~V~a~d~~~~~p~~f~~~~~~~~~~~ 176 (402)
..++-.+. ++. +.|.| ..+.|.+.|++++.+.-......++.|.-|...+++-++.+.|..
T Consensus 71 v~e~~~~s-----------~g~-~tP~f~~~~~l~~~le~~LPpda~~la~~rl~iSlTr~~~~~N~lis~F~s------ 132 (354)
T KOG3773|consen 71 VDEARRKS-----------LGA-FTPGFNLSDRLRSGLEDFLPPDAHWLASGRLHISLTRVKDRENVLISEFPS------ 132 (354)
T ss_pred HHHHHHhh-----------cCC-CCCCcCHHHHHHHHHHHhCChHHHHHhhcceeEEEEeeeehhhhhhhcccc------
Confidence 33322211 111 23444 478999999999987655555678888889999998888877764
Q ss_pred CchHHHHHHhhcCCCCCCC--ceeecCCCCCCCcceeeeeeccccCCchHH
Q 015720 177 DAQLADIAIGTSAAPTYFP--AHYFKNPDEHGTLKEFNLIDGGVAANNPTL 225 (402)
Q Consensus 177 ~~~l~da~~ASsAaP~yFp--p~~i~~~~~~G~~~~~~~iDGGv~~NnP~~ 225 (402)
...|.|+++|||=+|.|-+ |..+ ++..|+|||+.+|.|..
T Consensus 133 ~~~liq~L~~scyiP~ysg~~pp~~---------rg~~yiDGg~snnlP~~ 174 (354)
T KOG3773|consen 133 RDELIQALMCSCYIPMYSGLKPPIF---------RGVRYIDGGTSNNLPEA 174 (354)
T ss_pred HHHHHHHHHHhccCccccCCCCcce---------eeEEEeccccccccccc
Confidence 3579999999999999885 2223 34589999999999984
No 44
>cd00147 cPLA2_like Cytosolic phospholipase A2, catalytic domain; hydrolyses arachidonyl phospholipids. Catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Calcium is required for cPLA2 to bind with membranes or phospholipids. Group IV cPLA2 includes six intercellular enzymes: cPLA2alpha, cPLA2beta, cPLA2gamma, cPLA2delta, cP
Probab=97.41 E-value=0.00029 Score=71.17 Aligned_cols=52 Identities=25% Similarity=0.314 Sum_probs=43.2
Q ss_pred ceEEEEEeCCchhH-HHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHH-HHhCC
Q 015720 17 LITILSIDGGGIRG-IIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTA-MLTAP 77 (402)
Q Consensus 17 ~~~iLsLdGGG~RG-~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~-~l~~~ 77 (402)
+...|+++|||.|+ +..+|+|++|.+. .+.+.+++|+|+|.|+.++. +++.+
T Consensus 42 p~i~~~~sGGG~Ra~~~~~G~l~~l~~~---------gll~~~~yisg~Sgg~w~~~~~~~~~ 95 (438)
T cd00147 42 PVIAILGSGGGYRAMTGGAGALKALDEG---------GLLDCVTYLSGLSGSTWLMASLYSNP 95 (438)
T ss_pred ceEEEEecCchHHHHHhhhHHHHHHHhC---------CchhccceeeeccchHHHHHHHHHcC
Confidence 46779999999999 6899999999884 57899999999999995544 44443
No 45
>cd07202 cPLA2_Grp-IVC Group IVC cytoplasmic phospholipase A2; catalytic domain; Ca-independent. Group IVC cPLA2, a small 61 kDa protein, is a single domain alpha/beta hydrolase. It lacks a C2 domain; therefore, it has no Ca-dependence. Group IVC cPLA2 is also referred to as cPLA2-gamma. The cPLA2-gamma enzyme is predominantly found in cardiac and skeletal muscles, and to a lesser extent in the brain. Human cPLA2-gamma is approximately 30% identical to cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 be
Probab=93.80 E-value=0.063 Score=53.76 Aligned_cols=52 Identities=23% Similarity=0.273 Sum_probs=42.8
Q ss_pred CceEEEEEeCCchhHH-HHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhC
Q 015720 16 NLITILSIDGGGIRGI-IPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 16 ~~~~iLsLdGGG~RG~-~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~ 76 (402)
.+...|+++|||.|.+ ..+|+|.+|.+. .+.+...+++|.|.|+-+...|..
T Consensus 38 ~P~i~ia~SGGG~RAm~~~~G~l~al~~~---------GLl~~~tY~sglSGgsWl~~sLy~ 90 (430)
T cd07202 38 APVIAVLGSGGGLRAMIACLGVLSELDKA---------GLLDCVTYLAGVSGSTWCMSSLYT 90 (430)
T ss_pred CCeEEEEecCccHHHHHhccHHHHHhhhC---------ChhhhhhhhccccchHHHHHHHHh
Confidence 3457799999999997 688999999875 578899999999999977555443
No 46
>cd07201 cPLA2_Grp-IVB-IVD-IVE-IVF Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVB, IVD, IVE, and IVF cPLA2 consists of two domains: the regulatory C2 domain and alpha/beta hydrolase PLA2 domain. Group IVB, IVD, IVE, and IVF cPLA2 are also referred to as cPLA2-beta, -delta, -epsilon, and -zeta respectively. cPLA2-beta is approximately 30% identical to cPLA2-alpha and it shows low enzymatic activity compared to cPLA2alpha. cPLA2-beta hydrolyzes palmitic acid from 1-[14C]palmitoyl-2-arachidonoyl-PC and arachidonic acid from 1-palmitoyl-2[14C]arachidonoyl-PC, but not from 1-O-alkyl-2[3H]arachidonoyl-PC. cPLA2-delta, -epsilon, and -zeta are approximately 45-50% identical to cPLA2-beta and 31-37% identical to cPLA2-alpha. It's possible that cPLA2-beta, -delta, -epsilon, and -zeta may have arisen by gene duplication from an ancestral gene. The catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bon
Probab=90.81 E-value=0.4 Score=49.55 Aligned_cols=51 Identities=25% Similarity=0.223 Sum_probs=41.3
Q ss_pred ceEEEEEeCCchhHH-HHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhC
Q 015720 17 LITILSIDGGGIRGI-IPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~-~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~ 76 (402)
+...++++|||.|.+ .-+|+|.+|.+. .+.+...+++|.|.|+=+...|..
T Consensus 53 P~Igia~SGGGyRAml~gaG~l~al~~~---------GLLq~~tYlaGlSGg~Wl~gSLy~ 104 (541)
T cd07201 53 PVVAVMTTGGGTRALTSMYGSLLGLQKL---------GLLDCVSYITGLSGSTWTMATLYE 104 (541)
T ss_pred CeEEEEecCccHHHHHhccHHHHhhhcC---------CchhhhheecccCccHHHHHHHHc
Confidence 456799999999997 567999998552 478899999999999988555544
No 47
>PF01735 PLA2_B: Lysophospholipase catalytic domain; InterPro: IPR002642 This family consists of lysophospholipase / phospholipase B 3.1.1.5 from EC and cytosolic phospholipase A2 which also has a C2 domain IPR000008 from INTERPRO. Phospholipase B enzymes catalyse the release of fatty acids from lysophsopholipids and are capable in vitro of hydrolyzing all phospholipids extractable from yeast cells []. Cytosolic phospholipase A2 associates with natural membranes in response to physiological increases in Ca2+ and selectively hydrolyses arachidonyl phospholipids [], the aligned region corresponds the carboxy-terminal Ca2+-independent catalytic domain of the protein as discussed in [].; GO: 0004620 phospholipase activity, 0009395 phospholipid catabolic process; PDB: 1CJY_B.
Probab=88.87 E-value=0.53 Score=48.81 Aligned_cols=56 Identities=27% Similarity=0.383 Sum_probs=34.8
Q ss_pred EEEEeCCchhHH-HHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhC
Q 015720 20 ILSIDGGGIRGI-IPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 20 iLsLdGGG~RG~-~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~ 76 (402)
.|+++|||.|.+ ..+|+|.+|..+...-.| .-.|.+..++++|.|-|+=+...|+.
T Consensus 2 aia~SGGG~RAml~gaG~l~Ald~R~~~~~~-~gGLLq~~tY~sGlSGgsW~~~sl~~ 58 (491)
T PF01735_consen 2 AIAGSGGGYRAMLAGAGVLSALDSRNPGANG-TGGLLQCATYISGLSGGSWLVGSLYS 58 (491)
T ss_dssp EEEE---HHHHHHHHHHHHHHHH---------HCS-GGGECEEEE-HHHHHHHHHH--
T ss_pred eEEecCchHHHHHHHHHHHHHhhhhcccccc-ccchhhhhhhhhhcCcchhhhhhhhh
Confidence 589999999997 678999999855332110 12578999999999999987776654
No 48
>KOG1325 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=85.86 E-value=0.67 Score=48.12 Aligned_cols=60 Identities=23% Similarity=0.359 Sum_probs=43.7
Q ss_pred CceEEEEEeCCchhHHHH-HHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCC
Q 015720 16 NLITILSIDGGGIRGIIP-GVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 16 ~~~~iLsLdGGG~RG~~~-~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~ 77 (402)
-++..++++|||.|.... .|+|.+|.++...- |. -.+.+..++|+|.|.|.=+..-|+..
T Consensus 47 ~P~vaIa~SGGG~RAMl~g~G~Laamder~~~~-~l-~GLLqs~tYlaGlSGstW~vssLa~n 107 (571)
T KOG1325|consen 47 GPVVGIAGSGGGLRAMLSGAGALAAMDERTDNA-GL-GGLLQSATYLAGLSGGSWLVSSLAVN 107 (571)
T ss_pred CCeEEEEecCCCHHHHhhhhHHHHHHHhhccCC-cc-cchhhhhhhhcccCCCceeeeeeEEC
Confidence 345668999999999864 59999998763211 11 14678899999999998766666543
No 49
>smart00022 PLAc Cytoplasmic phospholipase A2, catalytic subunit. Cytosolic phospholipases A2 hydrolyse arachidonyl phospholipids. Family includes phospholipases B isoforms.
Probab=83.59 E-value=0.98 Score=47.26 Aligned_cols=59 Identities=22% Similarity=0.325 Sum_probs=45.5
Q ss_pred ceEEEEEeCCchhHH-HHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCC
Q 015720 17 LITILSIDGGGIRGI-IPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~-~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~ 77 (402)
+...|+++|||.|.+ ..+|+|.+|.++... .|. -.+.+.-.+++|.|.|+-+...|+..
T Consensus 76 P~Igia~SGGGyRAml~gaG~l~ald~R~~~-~~l-gGLLq~~tYlaGlSGgsWlv~sl~~n 135 (549)
T smart00022 76 PVIAIAGSGGGFRAMVGGAGVLKAMDNRTDG-HGL-GGLLQSATYLAGLSGGTWLVGTLASN 135 (549)
T ss_pred ceEEEEecCCCHHHHHhccHHHHHhhhcccc-ccc-ccHhhhhhhhhccchHHHHHHHHhhC
Confidence 456799999999997 578999999875322 111 14678889999999999988777754
No 50
>cd07200 cPLA2_Grp-IVA Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent. Group IVA cPLA2, an 85 kDa protein, consists of two domains: the regulatory C2 domain and the alpha/beta hydrolase PLA2 domain. Group IVA cPLA2 is also referred to as cPLA2-alpha. The catalytic domain of cytosolic phospholipase A2 (cPLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms. Movement of the cPLA2 lid possibly exposes a greater hydrophobic surface and the active site. cPLA2 belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile
Probab=83.18 E-value=0.77 Score=47.41 Aligned_cols=50 Identities=22% Similarity=0.254 Sum_probs=40.5
Q ss_pred ceEEEEEeCCchhHHH-HHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHh
Q 015720 17 LITILSIDGGGIRGII-PGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLT 75 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~~-~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~ 75 (402)
+...|+++|||.|.++ -+|+|++|.+. .+.+...+++|.|.|+=+...|.
T Consensus 44 P~Iaia~SGGGyRAMl~gaG~l~Ald~g---------GLLq~aTYlaGLSGgsWlvgsl~ 94 (505)
T cd07200 44 PVIALLGSGGGFRAMVGMSGAMKALYDS---------GVLDCATYVAGLSGSTWYMSTLY 94 (505)
T ss_pred CeEEEEecCccHHHHhhccHHHHhhhcC---------ChhhhhhhhhcCCccHHHHHHHH
Confidence 4567999999999984 67999998762 47899999999999996554444
No 51
>cd07203 cPLA2_Fungal_PLB Fungal Phospholipase B-like; cPLA2 GrpIVA homologs; catalytic domain. Fungal phospholipase B are Group IV cPLA2 homologs. Aspergillus PLA2 is Ca-dependent, yet it does not contain a C2 domain. PLB deacylates both sn-1 and sn-2 chains of phospholipids and are abundantly expressed in fungi. It shows lysophospholipase (lysoPL) and transacylase activities. The active site residues from cPLA2 are also conserved in PLB. Like cPLA2, PLB also has a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). It includes PLB1 from Schizosaccharomyces pombe, PLB2 from Candida glabrata, and PLB3 from Saccharomyces cerevisiae. PLB1, PLB2, and PLB3 show PLB and lysoPL activities; PLB3 is specific for phosphoinositides.
Probab=74.60 E-value=1.5 Score=45.83 Aligned_cols=61 Identities=18% Similarity=0.278 Sum_probs=44.6
Q ss_pred ceEEEEEeCCchhHH-HHHHHHHHHHHHhhhhcCCC-CCCCCCccEEEecchHHHHHHHHhCC
Q 015720 17 LITILSIDGGGIRGI-IPGVILAYLESQLQELDGED-ARLADYFDVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 17 ~~~iLsLdGGG~RG~-~~~~iL~~Le~~~~~~~g~~-~~~~~~fDli~GTStG~iia~~l~~~ 77 (402)
+...|+++|||.|.+ .-+|+|.+|..+...-.... -.+.+.-.+++|.|-|+=+...|+..
T Consensus 63 P~Igia~SGGGyRAMl~GaG~l~AlD~Rt~~~~~~glgGLLQsatYlaGLSGGsWlvgSl~~N 125 (552)
T cd07203 63 PRIGIAVSGGGYRAMLTGAGAIAAMDNRTDNATEHGLGGLLQSSTYLSGLSGGSWLVGSLASN 125 (552)
T ss_pred CeEEEEecCccHHHHHhccHHHHhhhcccccccccccccHHHHhhHhhhcCccchhhhhhhhC
Confidence 456799999999997 57799999976532110000 14678889999999999887777654
No 52
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=73.28 E-value=6.1 Score=35.47 Aligned_cols=36 Identities=33% Similarity=0.526 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHh
Q 015720 33 PGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLT 75 (402)
Q Consensus 33 ~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~ 75 (402)
+..++..+++.+.+... + -.+++|+|.||..|..|+
T Consensus 42 p~~a~~~l~~~i~~~~~------~-~~~liGSSlGG~~A~~La 77 (187)
T PF05728_consen 42 PEEAIAQLEQLIEELKP------E-NVVLIGSSLGGFYATYLA 77 (187)
T ss_pred HHHHHHHHHHHHHhCCC------C-CeEEEEEChHHHHHHHHH
Confidence 44455666666554211 1 169999999999999987
No 53
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=68.35 E-value=11 Score=37.49 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=16.0
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|..++..
T Consensus 150 ~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 150 AVVGGSMGGMQALEWAID 167 (379)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 799999999999988754
No 54
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=63.43 E-value=10 Score=32.63 Aligned_cols=12 Identities=50% Similarity=0.830 Sum_probs=10.8
Q ss_pred EEEecchHHHHH
Q 015720 60 VIAGTSTGGLLT 71 (402)
Q Consensus 60 li~GTStG~iia 71 (402)
+++|||+||+++
T Consensus 71 vi~G~SAGA~i~ 82 (154)
T PF03575_consen 71 VIIGTSAGAMIL 82 (154)
T ss_dssp EEEEETHHHHCT
T ss_pred EEEEEChHHhhc
Confidence 899999999884
No 55
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=59.93 E-value=20 Score=32.91 Aligned_cols=18 Identities=39% Similarity=0.473 Sum_probs=16.2
Q ss_pred cEEEecchHHHHHHHHhC
Q 015720 59 DVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 59 Dli~GTStG~iia~~l~~ 76 (402)
-.|+|.|+||..|+.++.
T Consensus 117 ~~i~G~S~GG~~Al~~~l 134 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLAL 134 (251)
T ss_dssp EEEEEETHHHHHHHHHHH
T ss_pred eEEeccCCCcHHHHHHHH
Confidence 499999999999998874
No 56
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=57.81 E-value=17 Score=30.07 Aligned_cols=17 Identities=47% Similarity=0.735 Sum_probs=15.1
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
+|+|.|.||-+|.+++.
T Consensus 67 ~itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 67 VITGHSLGGALASLAAA 83 (140)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred hhhccchHHHHHHHHHH
Confidence 68999999999998873
No 57
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=52.86 E-value=33 Score=33.59 Aligned_cols=18 Identities=22% Similarity=0.383 Sum_probs=15.8
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||++|..++..
T Consensus 130 ~l~G~S~Gg~ia~~~a~~ 147 (351)
T TIGR01392 130 AVVGGSMGGMQALEWAID 147 (351)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 689999999999988753
No 58
>PRK04940 hypothetical protein; Provisional
Probab=47.99 E-value=38 Score=30.19 Aligned_cols=43 Identities=16% Similarity=0.165 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhC
Q 015720 31 IIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 31 ~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~ 76 (402)
..|..+++.|++.+.+..... . +.-.+++|+|.||.-|..|+.
T Consensus 37 ~~P~~a~~~l~~~i~~~~~~~--~-~~~~~liGSSLGGyyA~~La~ 79 (180)
T PRK04940 37 LHPKHDMQHLLKEVDKMLQLS--D-DERPLICGVGLGGYWAERIGF 79 (180)
T ss_pred CCHHHHHHHHHHHHHHhhhcc--C-CCCcEEEEeChHHHHHHHHHH
Confidence 566667777777654321100 0 123699999999999998873
No 59
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=47.28 E-value=23 Score=32.19 Aligned_cols=19 Identities=47% Similarity=0.662 Sum_probs=16.7
Q ss_pred ccEEEecchHHHHHHHHhC
Q 015720 58 FDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 58 fDli~GTStG~iia~~l~~ 76 (402)
||-|.|-|-||.+|++|+.
T Consensus 103 fdGvlGFSQGA~lAa~ll~ 121 (212)
T PF03959_consen 103 FDGVLGFSQGAALAALLLA 121 (212)
T ss_dssp -SEEEEETHHHHHHHHHHH
T ss_pred eEEEEeecHHHHHHHHHHH
Confidence 9999999999999998873
No 60
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=46.88 E-value=24 Score=32.90 Aligned_cols=14 Identities=21% Similarity=0.173 Sum_probs=11.9
Q ss_pred EEEecchHHHHHHH
Q 015720 60 VIAGTSTGGLLTAM 73 (402)
Q Consensus 60 li~GTStG~iia~~ 73 (402)
.++|||+|++++.-
T Consensus 115 ~~~G~SAGAii~~~ 128 (233)
T PRK05282 115 PYIGWSAGANVAGP 128 (233)
T ss_pred EEEEECHHHHhhhc
Confidence 78999999998643
No 61
>COG3150 Predicted esterase [General function prediction only]
Probab=45.98 E-value=38 Score=29.95 Aligned_cols=37 Identities=38% Similarity=0.487 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhC
Q 015720 33 PGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 33 ~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~ 76 (402)
+...++.||+.+++..++ --+|+|+|-||--|..|+.
T Consensus 42 p~~a~~ele~~i~~~~~~-------~p~ivGssLGGY~At~l~~ 78 (191)
T COG3150 42 PQQALKELEKAVQELGDE-------SPLIVGSSLGGYYATWLGF 78 (191)
T ss_pred HHHHHHHHHHHHHHcCCC-------CceEEeecchHHHHHHHHH
Confidence 456778888877664332 2489999999999998874
No 62
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=43.67 E-value=26 Score=32.32 Aligned_cols=34 Identities=38% Similarity=0.555 Sum_probs=28.0
Q ss_pred HHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhC
Q 015720 35 VILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 35 ~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~ 76 (402)
..|++|++.+.+ .-.||=|.|-|-||.+|++|+.
T Consensus 90 esl~yl~~~i~e--------nGPFDGllGFSQGA~laa~l~~ 123 (230)
T KOG2551|consen 90 ESLEYLEDYIKE--------NGPFDGLLGFSQGAALAALLAG 123 (230)
T ss_pred HHHHHHHHHHHH--------hCCCccccccchhHHHHHHhhc
Confidence 458888888765 2349999999999999999985
No 63
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=42.55 E-value=62 Score=30.67 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=24.3
Q ss_pred CccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHH
Q 015720 57 YFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYI 95 (402)
Q Consensus 57 ~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~ 95 (402)
.+|.++|.|.|-+.|+.++ |. ++.++.+.+-.
T Consensus 82 ~p~~~~GhSlGE~aA~~~a-g~------~~~~~~l~l~~ 113 (298)
T smart00827 82 RPDAVVGHSLGEIAAAYVA-GV------LSLEDAARLVA 113 (298)
T ss_pred cccEEEecCHHHHHHHHHh-CC------CCHHHHHHHHH
Confidence 4689999999998887765 42 67788776543
No 64
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=42.12 E-value=20 Score=31.94 Aligned_cols=17 Identities=41% Similarity=0.618 Sum_probs=15.3
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
.++|.|+||-+|+.++.
T Consensus 74 ~l~G~SAGg~la~~~~~ 90 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLAL 90 (211)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEeecccccchhhhhhh
Confidence 68999999999999874
No 65
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=39.11 E-value=2.4e+02 Score=28.27 Aligned_cols=78 Identities=18% Similarity=0.319 Sum_probs=55.2
Q ss_pred CCCCcE-EEeecCC------CCC---CCcccccccHHHHHHHHHHHHHHhcccccccccCCCcccc------ccCCCCCc
Q 015720 314 QSEDNY-LRIEDDT------LQG---DVTSIDLTTKENFENLVRAGETLLKKPVSRINLDTGLYEP------IENGSAGT 377 (402)
Q Consensus 314 ~~~~~Y-~Ri~~~~------~~~---~~~~lD~~s~~~i~~L~~~a~~~l~~~~~~~~~~~~~~~~------~~~~~~~~ 377 (402)
..+.|| ||+++.. ++. ....|-..+++.|+.|...|+..|.+-..+.++.+...|+ ++....+-
T Consensus 228 GGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~IiRK~RAVGivP~~~~ki 307 (408)
T PF06437_consen 228 GGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATIIRKERAVGIVPKPGVKI 307 (408)
T ss_pred cccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEEeecceeeEecCCCCcc
Confidence 345676 5888741 122 1356778899999999999999999999999999888777 33222234
Q ss_pred hHHHHHHHHHHHHH
Q 015720 378 NEEALKRFAKMLSD 391 (402)
Q Consensus 378 n~~~l~~~a~~l~~ 391 (402)
.+|.|++.+-....
T Consensus 308 ~rE~LEE~VL~vq~ 321 (408)
T PF06437_consen 308 IREQLEEIVLTVQK 321 (408)
T ss_pred hhhhHHHHHHHHHH
Confidence 78888887654433
No 66
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=37.55 E-value=68 Score=30.99 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=24.4
Q ss_pred CCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHH
Q 015720 56 DYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYI 95 (402)
Q Consensus 56 ~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~ 95 (402)
-.+|+++|.|.|=+.|+.. .|. ++.++...+-.
T Consensus 83 i~P~~v~GhSlGE~aA~~a-aG~------ls~e~a~~lv~ 115 (318)
T PF00698_consen 83 IKPDAVIGHSLGEYAALVA-AGA------LSLEDALRLVY 115 (318)
T ss_dssp HCESEEEESTTHHHHHHHH-TTS------SSHHHHHHHHH
T ss_pred cccceeeccchhhHHHHHH-CCc------cchhhhhhhHH
Confidence 4579999999998877654 453 77888777543
No 67
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=37.39 E-value=79 Score=29.77 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=25.1
Q ss_pred CCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 56 DYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 56 ~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
-.+|.++|.|.|=+.|+.++ |. ++.++..++-..
T Consensus 82 i~p~~v~GhS~GE~aAa~~a-G~------ls~eda~~lv~~ 115 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAA-GA------LDFETALKLVKK 115 (290)
T ss_pred CCCCEEeecCHHHHHHHHHh-CC------CCHHHHHHHHHH
Confidence 34789999999998776665 42 678887776443
No 68
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=36.20 E-value=99 Score=30.13 Aligned_cols=81 Identities=21% Similarity=0.262 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHHh---CCCcCCcccc
Q 015720 31 IIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIRH---GPKIFPQLRG 107 (402)
Q Consensus 31 ~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~~---~~~iF~~~~~ 107 (402)
+.++.+++.|+++ .....+|+++|+|-|=..|+..+-- ++.++..++-... ..+..+...+
T Consensus 68 ~~s~a~~~~l~~~---------~~~~~p~~~aGHSlGEysAl~~ag~-------~~~ed~~~Lv~~RG~~M~~a~p~~~g 131 (310)
T COG0331 68 LVSLAAYRVLAEQ---------GLGVKPDFVAGHSLGEYSALAAAGV-------LSFEDALKLVRKRGKLMQEAVPRGEG 131 (310)
T ss_pred HHHHHHHHHHHHh---------cCCCCCceeecccHhHHHHHHHccc-------ccHHHHHHHHHHHHHHHHHHccCCCc
Confidence 4555666666665 1246689999999998888776532 6777777655433 2333433221
Q ss_pred -chhhhHHHHHHhhhcCCCChHHHHHHHHHHc
Q 015720 108 -MLANSVVNLVRALMGTKYDGKYLHKVIKENL 138 (402)
Q Consensus 108 -~~~~~~~~~~~~l~~~~y~~~~l~~~l~~~~ 138 (402)
+.. ..+ .+.+.+++++++.-
T Consensus 132 ~Maa---------v~g--l~~e~v~~~~~~~~ 152 (310)
T COG0331 132 GMAA---------VLG--LDDEQVEKACEEAA 152 (310)
T ss_pred cHHH---------HcC--CCHHHHHHHHHHhc
Confidence 111 111 26777777777764
No 69
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=35.90 E-value=93 Score=29.59 Aligned_cols=31 Identities=19% Similarity=0.240 Sum_probs=23.7
Q ss_pred CccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHH
Q 015720 57 YFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFY 94 (402)
Q Consensus 57 ~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y 94 (402)
.++.++|.|.|-+.|+..+.- ++.++...+-
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG~-------~s~e~a~~lv 106 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAGV-------LTFDDALRLV 106 (295)
T ss_pred CCcEEeecCHHHHHHHHHhCC-------CCHHHHHHHH
Confidence 478999999999888776533 6778876653
No 70
>PF06361 RTBV_P12: Rice tungro bacilliform virus P12 protein; InterPro: IPR009417 This family consists of several Rice tungro bacilliform virus P12 proteins. The function of this family is unknown [].
Probab=35.86 E-value=18 Score=27.71 Aligned_cols=44 Identities=14% Similarity=0.301 Sum_probs=29.3
Q ss_pred chhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHH
Q 015720 27 GIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAM 73 (402)
Q Consensus 27 G~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~ 73 (402)
..+|+.++..|+.|.+.++.+.. .+.....--+..|+|+|+-++
T Consensus 46 askglvqlyalqeidkkinnl~a---qv~k~pttsgs~sagaivpag 89 (110)
T PF06361_consen 46 ASKGLVQLYALQEIDKKINNLSA---QVSKIPTTSGSSSAGAIVPAG 89 (110)
T ss_pred hhhhHHHHHHHHHHHhhhhhhHh---hhhcCccCCCCCCcceeeecC
Confidence 46899999999999888765432 233333344456788887644
No 71
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=33.86 E-value=54 Score=30.81 Aligned_cols=13 Identities=31% Similarity=0.680 Sum_probs=11.5
Q ss_pred EEEecchHHHHHH
Q 015720 60 VIAGTSTGGLLTA 72 (402)
Q Consensus 60 li~GTStG~iia~ 72 (402)
+++|||+||++..
T Consensus 118 vi~G~SAGA~i~~ 130 (250)
T TIGR02069 118 ILGGTSAGAAVMS 130 (250)
T ss_pred eEEEccHHHHhcc
Confidence 8999999999863
No 72
>PF15595 Imm31: Immunity protein 31
Probab=33.83 E-value=57 Score=26.46 Aligned_cols=28 Identities=21% Similarity=0.576 Sum_probs=22.7
Q ss_pred ccccCCCccccccCCCCCchHHHHHHHHHHHHH
Q 015720 359 RINLDTGLYEPIENGSAGTNEEALKRFAKMLSD 391 (402)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~n~~~l~~~a~~l~~ 391 (402)
..|+|+|+|-.- .+|.++|++|+..+..
T Consensus 62 ~fDpEagmF~ay-----s~~~eal~~l~~~i~~ 89 (107)
T PF15595_consen 62 DFDPEAGMFCAY-----SEDKEALKKLAEIIKE 89 (107)
T ss_pred CcCCCCCEEEEe-----cCCHHHHHHHHHHHHH
Confidence 568899998554 6799999999988764
No 73
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=33.62 E-value=67 Score=29.37 Aligned_cols=45 Identities=27% Similarity=0.309 Sum_probs=26.2
Q ss_pred eEEEEEeCCchhHHHH----HHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHH
Q 015720 18 ITILSIDGGGIRGIIP----GVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAM 73 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~----~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~ 73 (402)
.-++-+.||-..=+.. -++++.|.+.+++ | =+++|+|+|+++..-
T Consensus 84 ad~I~~~GG~~~~~~~~l~~t~l~~~l~~~~~~--G---------~v~~G~SAGA~i~~~ 132 (217)
T cd03145 84 ADGIFFTGGDQLRITSALGGTPLLDALRKVYRG--G---------VVIGGTSAGAAVMSD 132 (217)
T ss_pred CCEEEEeCCcHHHHHHHHcCChHHHHHHHHHHc--C---------CEEEEccHHHHhhhh
Confidence 3466677776433322 1344444444321 2 279999999999754
No 74
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=33.03 E-value=1.1e+02 Score=29.94 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=25.3
Q ss_pred CCccEEEecchHHHHHHHHhCCCCCCCccCCHhHHHHHHHH
Q 015720 56 DYFDVIAGTSTGGLLTAMLTAPSEQNRPMYAAKDIVPFYIR 96 (402)
Q Consensus 56 ~~fDli~GTStG~iia~~l~~~~~~~~~~~s~~e~~~~y~~ 96 (402)
...|+++|.|.|=+.|+..+ |. ++.++.+.+...
T Consensus 123 ~~~~~~~GHSlGE~aA~~~A-G~------ls~e~al~lv~~ 156 (343)
T PLN02752 123 DSVDVCAGLSLGEYTALVFA-GA------LSFEDGLKLVKL 156 (343)
T ss_pred cCCCeeeeccHHHHHHHHHh-CC------CCHHHHHHHHHH
Confidence 35689999999998887765 42 677887776543
No 75
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=32.41 E-value=76 Score=29.18 Aligned_cols=17 Identities=29% Similarity=0.591 Sum_probs=14.2
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
+++|.|+||++|-.+..
T Consensus 88 ilVgHSmGGlvar~~l~ 104 (225)
T PF07819_consen 88 ILVGHSMGGLVARSALS 104 (225)
T ss_pred EEEEEchhhHHHHHHHh
Confidence 68899999999976653
No 76
>PRK11071 esterase YqiA; Provisional
Probab=32.07 E-value=1.4e+02 Score=26.43 Aligned_cols=18 Identities=28% Similarity=0.449 Sum_probs=16.0
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 64 ~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQC 81 (190)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 889999999999988753
No 77
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=30.98 E-value=1.1e+02 Score=27.69 Aligned_cols=15 Identities=40% Similarity=0.536 Sum_probs=13.1
Q ss_pred EEEecchHHHHHHHH
Q 015720 60 VIAGTSTGGLLTAML 74 (402)
Q Consensus 60 li~GTStG~iia~~l 74 (402)
+++|+|+|+++..-.
T Consensus 116 v~~G~SAGA~~~~~~ 130 (210)
T cd03129 116 VIGGTSAGAAVMGET 130 (210)
T ss_pred eEEEcCHHHHHhhhc
Confidence 899999999998654
No 78
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=30.23 E-value=94 Score=30.40 Aligned_cols=55 Identities=24% Similarity=0.200 Sum_probs=31.9
Q ss_pred ceEEEEEeCCc-------hhH-HHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhCC
Q 015720 17 LITILSIDGGG-------IRG-IIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 17 ~~~iLsLdGGG-------~RG-~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~~ 77 (402)
++++++||=.| -+| .|++.....+..++-+..+ ... =.++|.|.||++|..+|..
T Consensus 86 ~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~-----~~~-~~lvghS~Gg~va~~~Aa~ 148 (326)
T KOG1454|consen 86 GLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVF-----VEP-VSLVGHSLGGIVALKAAAY 148 (326)
T ss_pred ceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhc-----Ccc-eEEEEeCcHHHHHHHHHHh
Confidence 47888888544 122 2544444433333222111 111 2688999999999999865
No 79
>PRK06489 hypothetical protein; Provisional
Probab=29.74 E-value=60 Score=31.89 Aligned_cols=20 Identities=35% Similarity=0.501 Sum_probs=17.0
Q ss_pred ccEEEecchHHHHHHHHhCC
Q 015720 58 FDVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 58 fDli~GTStG~iia~~l~~~ 77 (402)
+.+++|.|.||.+|+.++..
T Consensus 155 ~~~lvG~SmGG~vAl~~A~~ 174 (360)
T PRK06489 155 LRLILGTSMGGMHAWMWGEK 174 (360)
T ss_pred eeEEEEECHHHHHHHHHHHh
Confidence 45689999999999998854
No 80
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=29.62 E-value=38 Score=31.06 Aligned_cols=44 Identities=16% Similarity=0.320 Sum_probs=27.3
Q ss_pred eEEEEEeCCchhHHHHH----HHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHH
Q 015720 18 ITILSIDGGGIRGIIPG----VILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTA 72 (402)
Q Consensus 18 ~~iLsLdGGG~RG~~~~----~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~ 72 (402)
.-++.+.||-.+-+... |.++-|.++.+. | -+.+|.||||++|.
T Consensus 85 ~d~IyVgGGNTF~LL~~lke~gld~iIr~~vk~--G---------~~YiG~SAGA~ia~ 132 (224)
T COG3340 85 ADIIYVGGGNTFNLLQELKETGLDDIIRERVKA--G---------TPYIGWSAGANIAG 132 (224)
T ss_pred ccEEEECCchHHHHHHHHHHhCcHHHHHHHHHc--C---------CceEEeccCceeec
Confidence 45677777776655432 344444444432 3 26789999999974
No 81
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=29.52 E-value=43 Score=28.33 Aligned_cols=17 Identities=29% Similarity=0.497 Sum_probs=15.1
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
+|+|.|.||-+|.+++.
T Consensus 31 ~v~GHSlGg~lA~l~a~ 47 (153)
T cd00741 31 HVTGHSLGGALAGLAGL 47 (153)
T ss_pred EEEEcCHHHHHHHHHHH
Confidence 68999999999998873
No 82
>PRK10162 acetyl esterase; Provisional
Probab=29.33 E-value=67 Score=31.09 Aligned_cols=17 Identities=29% Similarity=0.382 Sum_probs=15.2
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
.|+|.|+||.+|+.++.
T Consensus 157 ~l~G~SaGG~la~~~a~ 173 (318)
T PRK10162 157 GFAGDSAGAMLALASAL 173 (318)
T ss_pred EEEEECHHHHHHHHHHH
Confidence 78999999999988874
No 83
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=28.64 E-value=44 Score=30.04 Aligned_cols=18 Identities=39% Similarity=0.460 Sum_probs=15.7
Q ss_pred ccEEEecchHHHHHHHHh
Q 015720 58 FDVIAGTSTGGLLTAMLT 75 (402)
Q Consensus 58 fDli~GTStG~iia~~l~ 75 (402)
.=.++|.|.||++|.-++
T Consensus 67 p~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp SEEEEEETHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHH
Confidence 348999999999998876
No 84
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=28.55 E-value=1.1e+02 Score=31.08 Aligned_cols=18 Identities=17% Similarity=0.076 Sum_probs=15.7
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.+.|.|.||.+|+.++..
T Consensus 268 ~l~G~S~GG~~Al~~A~~ 285 (414)
T PRK05077 268 AAFGFRFGANVAVRLAYL 285 (414)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 689999999999988753
No 85
>PRK13604 luxD acyl transferase; Provisional
Probab=28.33 E-value=1.4e+02 Score=29.04 Aligned_cols=18 Identities=6% Similarity=-0.080 Sum_probs=14.7
Q ss_pred cEEEecchHHHHHHHHhC
Q 015720 59 DVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 59 Dli~GTStG~iia~~l~~ 76 (402)
=.+.|.|.||.+|++.+.
T Consensus 110 I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 110 LGLIAASLSARIAYEVIN 127 (307)
T ss_pred eEEEEECHHHHHHHHHhc
Confidence 378999999999876654
No 86
>PLN02408 phospholipase A1
Probab=28.31 E-value=94 Score=31.03 Aligned_cols=17 Identities=29% Similarity=0.448 Sum_probs=15.1
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
.|+|.|.||-+|++.+.
T Consensus 203 ~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 203 TITGHSLGAALATLTAY 219 (365)
T ss_pred EEeccchHHHHHHHHHH
Confidence 79999999999998763
No 87
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=27.88 E-value=43 Score=29.49 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=15.2
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 73 ~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQ 90 (251)
T ss_pred EEEEeccHHHHHHHHHHh
Confidence 467999999999988754
No 88
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=27.28 E-value=84 Score=31.60 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=18.6
Q ss_pred CCccEEEecchHHHHHHHHhCC
Q 015720 56 DYFDVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 56 ~~fDli~GTStG~iia~~l~~~ 77 (402)
+.+.+++|.|.||.+|..++..
T Consensus 160 ~~~~~vvG~SmGG~ial~~a~~ 181 (389)
T PRK06765 160 ARLHAVMGPSMGGMQAQEWAVH 181 (389)
T ss_pred CCceEEEEECHHHHHHHHHHHH
Confidence 3467899999999999998864
No 89
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=26.47 E-value=51 Score=28.43 Aligned_cols=17 Identities=35% Similarity=0.733 Sum_probs=15.2
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
+++|.|.||.+++.++.
T Consensus 69 ~lvG~S~Gg~~a~~~a~ 85 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAA 85 (228)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred ccccccccccccccccc
Confidence 68899999999998875
No 90
>PLN02571 triacylglycerol lipase
Probab=26.24 E-value=92 Score=31.60 Aligned_cols=17 Identities=29% Similarity=0.458 Sum_probs=15.0
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
.|+|+|.||-+|++.+.
T Consensus 229 ~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 229 TICGHSLGAALATLNAV 245 (413)
T ss_pred EEeccchHHHHHHHHHH
Confidence 79999999999988763
No 91
>PHA02857 monoglyceride lipase; Provisional
Probab=25.95 E-value=47 Score=30.82 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=15.3
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|..++..
T Consensus 100 ~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 100 FLLGHSMGATISILAAYK 117 (276)
T ss_pred EEEEcCchHHHHHHHHHh
Confidence 478999999999988753
No 92
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=25.07 E-value=52 Score=29.96 Aligned_cols=17 Identities=35% Similarity=0.743 Sum_probs=15.1
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
+++|.|.||-+|.+++.
T Consensus 131 ~vtGHSLGGaiA~l~a~ 147 (229)
T cd00519 131 IVTGHSLGGALASLLAL 147 (229)
T ss_pred EEEccCHHHHHHHHHHH
Confidence 68999999999988874
No 93
>COG1647 Esterase/lipase [General function prediction only]
Probab=24.86 E-value=52 Score=30.50 Aligned_cols=18 Identities=28% Similarity=0.492 Sum_probs=16.2
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.|+|-|.||++|+-|+..
T Consensus 88 ~v~GlSmGGv~alkla~~ 105 (243)
T COG1647 88 AVVGLSMGGVFALKLAYH 105 (243)
T ss_pred EEEeecchhHHHHHHHhh
Confidence 589999999999999864
No 94
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=24.80 E-value=1.2e+02 Score=27.45 Aligned_cols=14 Identities=29% Similarity=0.052 Sum_probs=11.8
Q ss_pred EEEecchHHHHHHH
Q 015720 60 VIAGTSTGGLLTAM 73 (402)
Q Consensus 60 li~GTStG~iia~~ 73 (402)
.++|+|+|+++..-
T Consensus 116 ~i~G~SAGa~i~~~ 129 (212)
T cd03146 116 VYIGWSAGSNCWFP 129 (212)
T ss_pred EEEEECHhHHhhCC
Confidence 78999999998643
No 95
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=24.79 E-value=60 Score=26.40 Aligned_cols=17 Identities=41% Similarity=0.698 Sum_probs=15.1
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
++.|.|.||.+++.++.
T Consensus 64 ~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAA 80 (145)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEEEccCcHHHHHHhh
Confidence 78999999999998874
No 96
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=24.66 E-value=78 Score=30.29 Aligned_cols=17 Identities=41% Similarity=0.636 Sum_probs=15.5
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
.++|.|+||-+|+.++.
T Consensus 155 ~v~GdSAGG~La~~~a~ 171 (312)
T COG0657 155 AVAGDSAGGHLALALAL 171 (312)
T ss_pred EEEecCcccHHHHHHHH
Confidence 78999999999999874
No 97
>PRK10673 acyl-CoA esterase; Provisional
Probab=24.46 E-value=56 Score=29.65 Aligned_cols=18 Identities=39% Similarity=0.431 Sum_probs=15.4
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|..++..
T Consensus 84 ~lvGhS~Gg~va~~~a~~ 101 (255)
T PRK10673 84 TFIGHSMGGKAVMALTAL 101 (255)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 577999999999988743
No 98
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=24.15 E-value=60 Score=28.97 Aligned_cols=17 Identities=35% Similarity=0.511 Sum_probs=15.1
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
.|.|.|.||.++++++.
T Consensus 67 ~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 67 GIMGHSYGGYLALLAAT 83 (213)
T ss_dssp EEEEETHHHHHHHHHHH
T ss_pred EEEcccccccccchhhc
Confidence 68999999999998874
No 99
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=23.92 E-value=1e+02 Score=31.58 Aligned_cols=39 Identities=21% Similarity=0.455 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHhC
Q 015720 33 PGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 33 ~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~~ 76 (402)
+..+|+.+.+.+....|.+.++ .|.|.|+||..+..+..
T Consensus 157 ~~~al~wv~~~i~~fggd~~~v-----~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 157 QRLALKWVQDNIAAFGGDPDSV-----TIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHHhCCCcceE-----EEEeecHHHHHhhhHhh
Confidence 3345555666655554533333 78999999998887764
No 100
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=23.67 E-value=57 Score=29.67 Aligned_cols=18 Identities=28% Similarity=0.422 Sum_probs=15.5
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 99 ~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 99 YLLGHSWGGMLAQEYALK 116 (288)
T ss_pred EEEEeehHHHHHHHHHHh
Confidence 678999999999988754
No 101
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=23.59 E-value=60 Score=29.23 Aligned_cols=18 Identities=22% Similarity=0.377 Sum_probs=15.8
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 69 ~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 69 WLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred EEEEECHHHHHHHHHHHh
Confidence 678999999999998864
No 102
>PLN02454 triacylglycerol lipase
Probab=22.49 E-value=1.6e+02 Score=29.85 Aligned_cols=16 Identities=31% Similarity=0.551 Sum_probs=14.5
Q ss_pred EEEecchHHHHHHHHh
Q 015720 60 VIAGTSTGGLLTAMLT 75 (402)
Q Consensus 60 li~GTStG~iia~~l~ 75 (402)
+|+|+|.||-+|++.+
T Consensus 231 ~vTGHSLGGALAtLaA 246 (414)
T PLN02454 231 VLTGHSLGASLATLAA 246 (414)
T ss_pred EEEecCHHHHHHHHHH
Confidence 5899999999999877
No 103
>PLN02324 triacylglycerol lipase
Probab=22.45 E-value=1.4e+02 Score=30.38 Aligned_cols=16 Identities=19% Similarity=0.488 Sum_probs=14.3
Q ss_pred EEEecchHHHHHHHHh
Q 015720 60 VIAGTSTGGLLTAMLT 75 (402)
Q Consensus 60 li~GTStG~iia~~l~ 75 (402)
.|+|+|.||-+|++.+
T Consensus 218 tvTGHSLGGALAtLaA 233 (415)
T PLN02324 218 TFTGHSLGAVMSVLSA 233 (415)
T ss_pred EEecCcHHHHHHHHHH
Confidence 5899999999998876
No 104
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=22.20 E-value=2.8e+02 Score=28.11 Aligned_cols=18 Identities=39% Similarity=0.484 Sum_probs=16.0
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
+|+|-|.||+.|+.++..
T Consensus 291 ~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 291 VVAGQSFGGLAALYAGLH 308 (411)
T ss_pred EEEEEChHHHHHHHHHHh
Confidence 799999999999988753
No 105
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=22.13 E-value=64 Score=31.42 Aligned_cols=18 Identities=22% Similarity=0.346 Sum_probs=15.8
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|..++..
T Consensus 141 ~lvG~SmGG~vA~~~A~~ 158 (343)
T PRK08775 141 AFVGYSYGALVGLQFASR 158 (343)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 589999999999998854
No 106
>PRK07581 hypothetical protein; Validated
Probab=21.74 E-value=66 Score=31.10 Aligned_cols=19 Identities=21% Similarity=0.202 Sum_probs=16.4
Q ss_pred cEEEecchHHHHHHHHhCC
Q 015720 59 DVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 59 Dli~GTStG~iia~~l~~~ 77 (402)
-.++|.|.||.+|..++..
T Consensus 126 ~~lvG~S~GG~va~~~a~~ 144 (339)
T PRK07581 126 ALVVGWSMGAQQTYHWAVR 144 (339)
T ss_pred EEEEEeCHHHHHHHHHHHH
Confidence 3579999999999999864
No 107
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=21.64 E-value=34 Score=15.53 Aligned_cols=7 Identities=57% Similarity=1.331 Sum_probs=5.0
Q ss_pred EEeCCch
Q 015720 22 SIDGGGI 28 (402)
Q Consensus 22 sLdGGG~ 28 (402)
+|.|||+
T Consensus 3 ~l~GgGV 9 (10)
T PF08250_consen 3 SLGGGGV 9 (10)
T ss_pred ccccCcC
Confidence 5778875
No 108
>PRK10566 esterase; Provisional
Probab=21.13 E-value=61 Score=29.51 Aligned_cols=18 Identities=28% Similarity=0.497 Sum_probs=15.7
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 110 ~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 110 AVGGASMGGMTALGIMAR 127 (249)
T ss_pred eEEeecccHHHHHHHHHh
Confidence 689999999999988753
No 109
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=21.13 E-value=1.4e+02 Score=28.63 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=16.8
Q ss_pred ccEEEecchHHHHHHHHhCC
Q 015720 58 FDVIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 58 fDli~GTStG~iia~~l~~~ 77 (402)
.=++.|.|+||+||+.++..
T Consensus 108 p~~l~gHSmGg~Ia~~~~~~ 127 (298)
T COG2267 108 PVFLLGHSMGGLIALLYLAR 127 (298)
T ss_pred CeEEEEeCcHHHHHHHHHHh
Confidence 34899999999999988754
No 110
>PF08343 RNR_N: Ribonucleotide reductase N-terminal; InterPro: IPR013554 This domain is found at the N terminus of bacterial ribonucleoside-diphosphate reductases (ribonucleotide reductases, RNRs) which catalyse the formation of deoxyribonucleotides []. It occurs together with the RNR all-alpha domain (IPR013509 from INTERPRO) and the RNR barrel domain (IPR000788 from INTERPRO). ; GO: 0004748 ribonucleoside-diphosphate reductase activity, 0006260 DNA replication, 0055114 oxidation-reduction process, 0005971 ribonucleoside-diphosphate reductase complex; PDB: 1PEM_A 2BQ1_E 1PEU_A 1PEQ_A 1PEO_A.
Probab=21.08 E-value=99 Score=23.79 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhcccccccccCCCccccccCCCCCchHHHHHHHHH
Q 015720 343 ENLVRAGETLLKKPVSRINLDTGLYEPIENGSAGTNEEALKRFAK 387 (402)
Q Consensus 343 ~~L~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~n~~~l~~~a~ 387 (402)
++=+++.+.|++++ |++.|.+|+.. +|+|+++.+
T Consensus 20 ~kD~eA~~~y~~~~---V~pnt~~F~S~--------~Erl~yLv~ 53 (82)
T PF08343_consen 20 EKDKEAVRAYFKEH---VNPNTVKFNSL--------KERLDYLVE 53 (82)
T ss_dssp HHHHHHHHHHHHHT---TGGGB---SSH--------HHHHHHHHH
T ss_pred hhHHHHHHHHHHHh---cccceeecCCH--------HHHHHHHHH
Confidence 44456777888766 57899999776 888887754
No 111
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=21.04 E-value=63 Score=31.08 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=15.6
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 137 ~l~GhSmGG~ia~~~a~~ 154 (330)
T PLN02298 137 FLYGESMGGAICLLIHLA 154 (330)
T ss_pred EEEEecchhHHHHHHHhc
Confidence 899999999999887753
No 112
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=20.95 E-value=1.3e+02 Score=28.66 Aligned_cols=50 Identities=26% Similarity=0.301 Sum_probs=27.2
Q ss_pred EEEeCCchhHHHHHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHh
Q 015720 21 LSIDGGGIRGIIPGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLT 75 (402)
Q Consensus 21 LsLdGGG~RG~~~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~ 75 (402)
.-..|||.-... +.|++++.-..-...++...--.|-|.|.||++++...
T Consensus 106 ~~~~gGg~~~f~-----~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aL 155 (264)
T COG2819 106 FYQFGGGGDAFR-----EFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFAL 155 (264)
T ss_pred CCCCCCChHHHH-----HHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHH
Confidence 345677765543 33334332111111122222368999999999997654
No 113
>PLN02802 triacylglycerol lipase
Probab=20.93 E-value=1.3e+02 Score=31.42 Aligned_cols=16 Identities=25% Similarity=0.530 Sum_probs=14.5
Q ss_pred EEEecchHHHHHHHHh
Q 015720 60 VIAGTSTGGLLTAMLT 75 (402)
Q Consensus 60 li~GTStG~iia~~l~ 75 (402)
+|+|.|.||-+|++.+
T Consensus 333 ~VTGHSLGGALAtLaA 348 (509)
T PLN02802 333 TVTGHSLGAALALLVA 348 (509)
T ss_pred EEeccchHHHHHHHHH
Confidence 6999999999998876
No 114
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=20.89 E-value=73 Score=29.66 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=15.2
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 94 ~LvG~S~GG~va~~~a~~ 111 (276)
T TIGR02240 94 NAIGVSWGGALAQQFAHD 111 (276)
T ss_pred EEEEECHHHHHHHHHHHH
Confidence 366999999999998854
No 115
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=20.45 E-value=70 Score=28.19 Aligned_cols=18 Identities=44% Similarity=0.632 Sum_probs=15.4
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|.||.+|+.++..
T Consensus 82 ~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 82 VFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred EEEEeCchHHHHHHHHHH
Confidence 578999999999988753
No 116
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=20.41 E-value=73 Score=28.43 Aligned_cols=17 Identities=29% Similarity=0.497 Sum_probs=15.2
Q ss_pred EEEecchHHHHHHHHhC
Q 015720 60 VIAGTSTGGLLTAMLTA 76 (402)
Q Consensus 60 li~GTStG~iia~~l~~ 76 (402)
.++|.|.||.+|..++.
T Consensus 83 ~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 83 HFVGHALGGLIGLQLAL 99 (257)
T ss_pred EEEEechhHHHHHHHHH
Confidence 68999999999998874
No 117
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=20.18 E-value=72 Score=30.04 Aligned_cols=18 Identities=28% Similarity=0.348 Sum_probs=16.0
Q ss_pred EEEecchHHHHHHHHhCC
Q 015720 60 VIAGTSTGGLLTAMLTAP 77 (402)
Q Consensus 60 li~GTStG~iia~~l~~~ 77 (402)
.++|.|+||.+|+.++..
T Consensus 141 ~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 141 GITGHSMGGHGALVIALK 158 (275)
T ss_pred EEEEEChhHHHHHHHHHh
Confidence 789999999999998853
No 118
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=20.04 E-value=1.1e+02 Score=31.37 Aligned_cols=44 Identities=18% Similarity=0.469 Sum_probs=34.3
Q ss_pred chhHHH-HHHHHHHHHHHhhhhcCCCCCCCCCccEEEecchHHHHHHHHh
Q 015720 27 GIRGII-PGVILAYLESQLQELDGEDARLADYFDVIAGTSTGGLLTAMLT 75 (402)
Q Consensus 27 G~RG~~-~~~iL~~Le~~~~~~~g~~~~~~~~fDli~GTStG~iia~~l~ 75 (402)
|-.|+. +..+|+-+.+.+....|.+-++ .|.|.|+||..+..+.
T Consensus 182 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~V-----Tl~G~SAGa~sv~~~l 226 (535)
T PF00135_consen 182 GNYGLLDQRLALKWVQDNIAAFGGDPDNV-----TLFGQSAGAASVSLLL 226 (535)
T ss_dssp STHHHHHHHHHHHHHHHHGGGGTEEEEEE-----EEEEETHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhcccCCcce-----eeeeecccccccceee
Confidence 777886 7788999999998887743343 6789999999877654
Done!