Query 015721
Match_columns 402
No_of_seqs 255 out of 3145
Neff 11.4
Searched_HMMs 46136
Date Fri Mar 29 08:57:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015721.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015721hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4341 F-box protein containi 100.0 1.1E-37 2.5E-42 259.8 13.9 381 4-393 69-461 (483)
2 KOG4341 F-box protein containi 99.9 4E-27 8.8E-32 197.0 10.2 312 85-398 124-440 (483)
3 KOG2120 SCF ubiquitin ligase, 99.9 9.3E-26 2E-30 180.9 14.0 290 6-334 97-388 (419)
4 cd00116 LRR_RI Leucine-rich re 99.7 2.2E-14 4.8E-19 126.4 25.3 162 228-393 137-316 (319)
5 cd00116 LRR_RI Leucine-rich re 99.7 3.2E-14 6.9E-19 125.4 24.4 274 88-369 13-318 (319)
6 PLN00113 leucine-rich repeat r 99.7 1.2E-15 2.5E-20 154.0 16.5 303 61-396 88-392 (968)
7 PLN00113 leucine-rich repeat r 99.7 1.7E-15 3.6E-20 152.9 17.4 14 303-316 328-341 (968)
8 KOG1947 Leucine rich repeat pr 99.7 1.4E-15 3.1E-20 142.0 15.2 140 147-287 185-327 (482)
9 PLN03210 Resistant to P. syrin 99.6 1.3E-15 2.8E-20 154.2 13.4 130 253-399 777-908 (1153)
10 KOG2120 SCF ubiquitin ligase, 99.6 7.7E-16 1.7E-20 124.4 8.8 204 176-387 185-390 (419)
11 KOG1947 Leucine rich repeat pr 99.6 3.2E-15 6.9E-20 139.7 12.2 285 95-382 158-451 (482)
12 PLN03210 Resistant to P. syrin 99.5 2.3E-13 4.9E-18 138.1 12.5 249 122-400 632-885 (1153)
13 KOG0444 Cytoskeletal regulator 99.4 2E-15 4.3E-20 134.1 -7.1 154 227-396 221-374 (1255)
14 KOG4194 Membrane glycoprotein 99.4 5.5E-14 1.2E-18 123.9 -0.5 278 61-369 120-427 (873)
15 KOG4194 Membrane glycoprotein 99.3 1.8E-13 4E-18 120.7 -0.9 191 175-380 268-461 (873)
16 KOG3207 Beta-tubulin folding c 99.2 3.4E-12 7.3E-17 108.9 3.2 210 149-366 120-334 (505)
17 KOG0444 Cytoskeletal regulator 99.2 3.5E-13 7.6E-18 120.1 -3.8 249 97-371 125-375 (1255)
18 KOG1909 Ran GTPase-activating 99.1 6.6E-09 1.4E-13 86.7 16.5 261 90-357 22-324 (382)
19 KOG1909 Ran GTPase-activating 99.1 8.2E-09 1.8E-13 86.2 16.4 267 56-332 20-324 (382)
20 KOG3207 Beta-tubulin folding c 99.1 2.5E-11 5.5E-16 103.7 1.6 215 173-395 118-337 (505)
21 KOG0618 Serine/threonine phosp 99.0 3.6E-11 7.9E-16 111.9 -1.2 126 230-370 361-488 (1081)
22 PF12937 F-box-like: F-box-lik 99.0 2.5E-10 5.4E-15 68.3 2.2 37 8-45 2-38 (47)
23 KOG3665 ZYG-1-like serine/thre 98.8 3E-08 6.5E-13 94.1 11.9 108 124-237 122-229 (699)
24 KOG2982 Uncharacterized conser 98.8 2.7E-09 5.7E-14 87.1 3.6 196 168-371 63-262 (418)
25 KOG3665 ZYG-1-like serine/thre 98.8 4.8E-08 1E-12 92.8 11.2 158 202-366 122-283 (699)
26 KOG0618 Serine/threonine phosp 98.7 1.7E-09 3.6E-14 101.2 -2.4 128 256-396 361-488 (1081)
27 PRK15387 E3 ubiquitin-protein 98.6 4.2E-08 9.1E-13 93.7 5.9 83 281-378 382-464 (788)
28 PRK15387 E3 ubiquitin-protein 98.6 2.5E-08 5.4E-13 95.2 3.8 256 67-396 202-457 (788)
29 smart00256 FBOX A Receptor for 98.6 7.2E-08 1.6E-12 55.9 3.2 35 10-45 1-35 (41)
30 KOG1259 Nischarin, modulator o 98.5 1.9E-08 4.1E-13 82.4 0.1 130 227-371 283-412 (490)
31 PF00646 F-box: F-box domain; 98.5 3.6E-08 7.9E-13 59.3 0.6 38 7-45 3-40 (48)
32 KOG2982 Uncharacterized conser 98.4 3.9E-07 8.4E-12 74.8 4.7 209 100-318 47-260 (418)
33 KOG4237 Extracellular matrix p 98.4 6.7E-08 1.4E-12 82.2 0.0 102 281-387 274-375 (498)
34 PRK15370 E3 ubiquitin-protein 98.3 3.6E-06 7.8E-11 81.1 11.0 255 66-378 178-434 (754)
35 PF14580 LRR_9: Leucine-rich r 98.3 5.1E-07 1.1E-11 70.3 3.8 37 226-262 111-148 (175)
36 KOG4237 Extracellular matrix p 98.3 9.2E-08 2E-12 81.4 -0.7 247 68-340 69-353 (498)
37 KOG4658 Apoptotic ATPase [Sign 98.3 3.1E-07 6.7E-12 89.8 2.1 84 121-211 568-651 (889)
38 KOG3864 Uncharacterized conser 98.2 1.1E-06 2.5E-11 68.0 4.1 104 283-389 103-209 (221)
39 KOG4658 Apoptotic ATPase [Sign 98.2 6.7E-07 1.5E-11 87.4 3.3 236 122-372 543-784 (889)
40 KOG0472 Leucine-rich repeat pr 98.2 5.7E-07 1.2E-11 76.9 2.0 110 249-371 430-541 (565)
41 PRK15370 E3 ubiquitin-protein 98.1 1.6E-05 3.4E-10 76.8 10.1 235 66-353 199-435 (754)
42 KOG0472 Leucine-rich repeat pr 98.1 2.3E-07 4.9E-12 79.3 -2.0 40 354-396 501-540 (565)
43 PF14580 LRR_9: Leucine-rich r 98.1 1.7E-06 3.8E-11 67.4 2.8 134 253-396 18-152 (175)
44 KOG1259 Nischarin, modulator o 97.9 1.9E-06 4.2E-11 70.9 0.1 128 253-396 283-411 (490)
45 COG5238 RNA1 Ran GTPase-activa 97.9 0.0013 2.8E-08 54.0 15.8 90 121-212 27-130 (388)
46 KOG0617 Ras suppressor protein 97.9 9E-08 1.9E-12 71.9 -7.7 152 65-238 32-183 (264)
47 KOG3864 Uncharacterized conser 97.9 8.7E-06 1.9E-10 63.2 2.4 85 309-396 103-188 (221)
48 COG5238 RNA1 Ran GTPase-activa 97.8 0.0011 2.4E-08 54.4 12.8 224 168-396 23-284 (388)
49 KOG0617 Ras suppressor protein 97.3 1.2E-06 2.7E-11 65.9 -8.2 79 124-211 33-111 (264)
50 KOG1859 Leucine-rich repeat pr 97.3 2.2E-05 4.8E-10 72.6 -2.7 55 142-197 76-130 (1096)
51 KOG1859 Leucine-rich repeat pr 97.3 1.3E-05 2.8E-10 74.1 -4.1 206 116-345 76-291 (1096)
52 PRK15386 type III secretion pr 97.1 0.0013 2.8E-08 58.3 6.6 174 174-383 50-225 (426)
53 smart00367 LRR_CC Leucine-rich 97.1 0.00062 1.3E-08 34.4 2.6 24 357-380 1-24 (26)
54 PRK15386 type III secretion pr 97.0 0.00078 1.7E-08 59.7 4.2 169 95-299 49-218 (426)
55 KOG2739 Leucine-rich acidic nu 96.6 0.00027 5.8E-09 57.5 -1.4 9 253-261 142-150 (260)
56 smart00367 LRR_CC Leucine-rich 96.6 0.003 6.4E-08 31.9 2.9 24 306-329 1-24 (26)
57 PF13855 LRR_8: Leucine rich r 96.5 0.00023 5E-09 45.1 -2.2 13 356-368 47-59 (61)
58 KOG2123 Uncharacterized conser 96.4 0.0013 2.8E-08 54.2 1.0 103 97-208 18-123 (388)
59 PLN03215 ascorbic acid mannose 96.4 0.0028 6.1E-08 55.5 3.0 39 6-44 3-41 (373)
60 PF13855 LRR_8: Leucine rich r 96.3 0.0014 3.1E-08 41.4 0.9 37 122-160 23-59 (61)
61 KOG2739 Leucine-rich acidic nu 96.3 0.0013 2.9E-08 53.6 0.9 109 254-369 43-154 (260)
62 KOG2997 F-box protein FBX9 [Ge 96.2 0.004 8.7E-08 52.1 2.7 38 8-46 108-150 (366)
63 KOG2123 Uncharacterized conser 96.1 0.0024 5.1E-08 52.7 1.3 112 253-378 18-134 (388)
64 PF12799 LRR_4: Leucine Rich r 96.1 0.0058 1.3E-07 35.4 2.4 34 334-369 2-35 (44)
65 COG4886 Leucine-rich repeat (L 96.0 0.0065 1.4E-07 55.3 3.7 169 124-316 116-286 (394)
66 KOG1644 U2-associated snRNP A' 95.9 0.007 1.5E-07 47.5 3.0 106 254-367 42-149 (233)
67 PF12799 LRR_4: Leucine Rich r 95.9 0.0093 2E-07 34.6 2.8 35 281-318 1-35 (44)
68 PLN03150 hypothetical protein; 95.8 0.039 8.4E-07 53.3 7.9 108 151-265 419-526 (623)
69 KOG0281 Beta-TrCP (transducin 95.7 0.0073 1.6E-07 51.0 2.5 37 8-45 76-116 (499)
70 PLN03150 hypothetical protein; 95.4 0.05 1.1E-06 52.5 7.4 108 177-292 419-526 (623)
71 COG4886 Leucine-rich repeat (L 95.4 0.017 3.8E-07 52.5 4.0 173 149-345 115-289 (394)
72 PF13013 F-box-like_2: F-box-l 93.8 0.077 1.7E-06 37.6 3.3 28 8-36 23-50 (109)
73 KOG4308 LRR-containing protein 93.4 0.051 1.1E-06 50.2 2.2 110 227-340 203-325 (478)
74 KOG4308 LRR-containing protein 93.3 0.53 1.2E-05 43.7 8.7 67 332-399 403-475 (478)
75 KOG1644 U2-associated snRNP A' 93.3 0.059 1.3E-06 42.6 2.1 109 281-395 42-151 (233)
76 PF13516 LRR_6: Leucine Rich r 93.0 0.12 2.5E-06 25.3 2.3 23 306-329 1-23 (24)
77 KOG4579 Leucine-rich repeat (L 92.3 0.054 1.2E-06 40.0 0.7 59 148-211 51-109 (177)
78 KOG0532 Leucine-rich repeat (L 91.7 0.0085 1.8E-07 54.6 -4.7 62 303-370 185-246 (722)
79 KOG4579 Leucine-rich repeat (L 90.4 0.11 2.5E-06 38.3 0.7 104 255-367 28-132 (177)
80 KOG0531 Protein phosphatase 1, 88.5 0.15 3.2E-06 46.8 0.2 108 226-348 93-201 (414)
81 KOG0532 Leucine-rich repeat (L 87.8 0.0084 1.8E-07 54.6 -7.9 32 282-316 212-243 (722)
82 KOG0274 Cdc4 and related F-box 86.8 0.28 6E-06 46.2 1.0 39 6-45 107-145 (537)
83 KOG3763 mRNA export factor TAP 86.5 1.5 3.3E-05 40.5 5.3 87 94-182 214-307 (585)
84 KOG0531 Protein phosphatase 1, 85.7 0.24 5.2E-06 45.4 -0.1 107 252-372 93-200 (414)
85 KOG3763 mRNA export factor TAP 84.7 1.1 2.5E-05 41.3 3.7 37 281-317 218-254 (585)
86 smart00368 LRR_RI Leucine rich 82.0 2.6 5.6E-05 21.4 2.9 18 125-143 3-20 (28)
87 PF13504 LRR_7: Leucine rich r 81.7 1.2 2.5E-05 19.6 1.3 12 358-369 1-12 (17)
88 PF07723 LRR_2: Leucine Rich R 71.4 3.7 8.1E-05 20.5 1.7 10 298-307 17-26 (26)
89 KOG3926 F-box proteins [Amino 70.0 5.4 0.00012 33.2 3.2 33 4-36 199-231 (332)
90 PF03382 DUF285: Mycoplasma pr 62.1 6.7 0.00014 28.7 2.2 10 145-154 56-65 (120)
91 PF03382 DUF285: Mycoplasma pr 57.6 9.2 0.0002 27.9 2.3 16 168-184 53-68 (120)
92 PF00560 LRR_1: Leucine Rich R 46.3 11 0.00025 17.6 0.8 13 359-372 1-13 (22)
93 PF07735 FBA_2: F-box associat 35.7 1.2E+02 0.0025 19.3 6.7 30 336-365 35-69 (70)
94 KOG2502 Tub family proteins [G 32.6 28 0.00061 30.4 1.6 39 6-44 44-89 (355)
95 smart00370 LRR Leucine-rich re 31.9 40 0.00086 16.4 1.5 12 357-368 1-12 (26)
96 smart00369 LRR_TYP Leucine-ric 31.9 40 0.00086 16.4 1.5 12 357-368 1-12 (26)
97 KOG3735 Tropomodulin and leiom 30.1 1.4E+02 0.003 26.3 5.3 26 197-223 250-275 (353)
98 KOG3735 Tropomodulin and leiom 26.2 2.2E+02 0.0047 25.2 5.7 95 271-367 189-292 (353)
99 smart00365 LRR_SD22 Leucine-ri 25.6 58 0.0013 16.3 1.4 13 334-346 3-15 (26)
100 smart00446 LRRcap occurring C- 21.4 88 0.0019 15.7 1.6 16 352-367 7-22 (26)
No 1
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=259.75 Aligned_cols=381 Identities=27% Similarity=0.504 Sum_probs=335.0
Q ss_pred ccccccCCHHHHHHHHccCCCcchhhHHHHhhHHHHHhhhhccccccc--cc-----ChhHHHHHHHhcC-cceEEeccC
Q 015721 4 LCINEVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTERKKLSV--RA-----GPHMLRKIAARFS-RLVELDLSQ 75 (402)
Q Consensus 4 ~~~~~~LP~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~~~~~l~~--~~-----~~~~~~~~~~~~~-~l~~L~l~~ 75 (402)
..++..||+|++..||++|+ ++.+.+++++|+.|...+.+..-|-.+ .+ .-..+..+..++. .+++|.+.+
T Consensus 69 ~~~~~~LPpEl~lkvFS~LD-tksl~r~a~~c~~~n~~AlD~~~~q~idL~t~~rDv~g~VV~~~~~Rcgg~lk~LSlrG 147 (483)
T KOG4341|consen 69 NSISRSLPPELLLKVFSMLD-TKSLCRAAQCCTMWNKLALDGSCWQHIDLFTFQRDVDGGVVENMISRCGGFLKELSLRG 147 (483)
T ss_pred ccccccCCHHHHHHHHHHHh-HHHHHHHHHHHHHhhhhhhccccceeeehhcchhcCCCcceehHhhhhccccccccccc
Confidence 44566799999999999999 699999999999999887665433332 11 2245667777775 699999998
Q ss_pred CcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEE
Q 015721 76 SVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSL 155 (402)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L 155 (402)
...+.+..+..+...+|++++|.+.+|..+++..+..++..|++|++|++..|..+++..+..+...|++|+++
T Consensus 148 ------~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~l 221 (483)
T KOG4341|consen 148 ------CRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYL 221 (483)
T ss_pred ------cccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHh
Confidence 46788888888899999999999999999999999999999999999999999989998898899999999999
Q ss_pred ecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEe
Q 015721 156 HLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKL 235 (402)
Q Consensus 156 ~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l 235 (402)
+++.|+.+...++..+...+..++.+...+|...+.+.+...-..++-+-++++..|..+++.++..+...+..|+.+..
T Consensus 222 NlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~ 301 (483)
T KOG4341|consen 222 NLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCY 301 (483)
T ss_pred hhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhhhhHhhhhcc
Confidence 99999999888899999989999999888999888888877777778888888889999999888888888999999999
Q ss_pred cCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEecc
Q 015721 236 LDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIG 315 (402)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~ 315 (402)
+++..+++..+.++..++++|+.|.+.+|..+++..+..+...+ +.|+.+++..+..+++..+..+..+||.|+.+.++
T Consensus 302 s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~-~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lsls 380 (483)
T KOG4341|consen 302 SSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNC-PHLERLDLEECGLITDGTLASLSRNCPRLRVLSLS 380 (483)
T ss_pred cCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCC-hhhhhhcccccceehhhhHhhhccCCchhccCChh
Confidence 99999999999999999999999999999999999999998887 89999999999878877788888999999999999
Q ss_pred CCCCCChHHHHHHHhc---cCCCcEEEE-eCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcceEec
Q 015721 316 CCEEVTDAAFQDLGEV---ELSLKVLKV-NCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNF 391 (402)
Q Consensus 316 ~~~~~~~~~~~~~~~~---~~~L~~L~l-~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~ 391 (402)
+|..++|.++..+... ...|+.+++ +|..+++..++.+ ..|++||.+++.+|..++.+.+..+..++|+++....
T Consensus 381 hce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l-~~c~~Leri~l~~~q~vtk~~i~~~~~~lp~i~v~a~ 459 (483)
T KOG4341|consen 381 HCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHL-SICRNLERIELIDCQDVTKEAISRFATHLPNIKVHAY 459 (483)
T ss_pred hhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHH-hhCcccceeeeechhhhhhhhhHHHHhhCccceehhh
Confidence 9999999988877653 347888888 8888888777555 6899999999999999999999999999999987766
Q ss_pred cc
Q 015721 392 AG 393 (402)
Q Consensus 392 ~~ 393 (402)
.+
T Consensus 460 ~a 461 (483)
T KOG4341|consen 460 FA 461 (483)
T ss_pred cc
Confidence 55
No 2
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=99.94 E-value=4e-27 Score=197.02 Aligned_cols=312 Identities=28% Similarity=0.516 Sum_probs=280.6
Q ss_pred CChhhHHHHHhhC-CCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccC
Q 015721 85 VTDSDLAVIADGF-KSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSV 163 (402)
Q Consensus 85 ~~~~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 163 (402)
+....+..+.+.+ ..|+.|.+.+|..+.+..+..+...+|++++|.+.+|.++++..+..+...|++|+.+++..|..+
T Consensus 124 v~g~VV~~~~~Rcgg~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~i 203 (483)
T KOG4341|consen 124 VDGGVVENMISRCGGFLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSI 203 (483)
T ss_pred CCCcceehHhhhhccccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchh
Confidence 3334444444444 479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCCh
Q 015721 164 TDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGD 243 (402)
Q Consensus 164 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 243 (402)
++..+..+...|++|++|++++|+.+...++....+++..++.+...+|.......+......++.+.++++..|..+++
T Consensus 204 T~~~Lk~la~gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD 283 (483)
T KOG4341|consen 204 TDVSLKYLAEGCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTD 283 (483)
T ss_pred HHHHHHHHHHhhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccc
Confidence 99999989999999999999999999988888899999999999888999888888888888888899999999999999
Q ss_pred HHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChH
Q 015721 244 KSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDA 323 (402)
Q Consensus 244 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~ 323 (402)
..+..+...+..|+.|..++|...++..+..+..++ ++|+.|.+++|..+++.++..+-++++.|+.+++.+|..+.+.
T Consensus 284 ~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~-~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~ 362 (483)
T KOG4341|consen 284 EDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHC-HNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDG 362 (483)
T ss_pred hHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCC-CceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhh
Confidence 998888888999999999999999999999999998 9999999999999999999998999999999999999999998
Q ss_pred HHHHHHhccCCCcEEEE-eCCCCCHHHHHHHH---HhCCCCCEEeccCCCCCCHhHHHhhccCCCCcceEeccccccCC
Q 015721 324 AFQDLGEVELSLKVLKV-NCPKVTVVGIGNVL---EKCASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNFAGCLFEP 398 (402)
Q Consensus 324 ~~~~~~~~~~~L~~L~l-~~~~~~~~~l~~~~---~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~ 398 (402)
.+..+...++.|+.+.+ .|..+++.++..+- .....|+.+.+++||.++++.++.+. ..+++++|++-+|-..+
T Consensus 363 tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~-~c~~Leri~l~~~q~vt 440 (483)
T KOG4341|consen 363 TLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLS-ICRNLERIELIDCQDVT 440 (483)
T ss_pred hHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHh-hCcccceeeeechhhhh
Confidence 89999999999999999 89999988775543 36678999999999999999998888 78899999999987643
No 3
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=9.3e-26 Score=180.86 Aligned_cols=290 Identities=24% Similarity=0.342 Sum_probs=174.9
Q ss_pred ccccCCHHHHHHHHccCCCcchhhHHHHhhHHHHHhhhhcccccccccChhHHHHHHHhcCcceEEeccCCcCCCCCCCC
Q 015721 6 INEVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTERKKLSVRAGPHMLRKIAARFSRLVELDLSQSVSRSFYPGV 85 (402)
Q Consensus 6 ~~~~LP~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~ 85 (402)
.++.|||||+..||+.|+ .+++++++.|||||+++..+...|.+ +|+.+ ..+
T Consensus 97 ~~~slpDEill~IFs~L~-kk~LL~~~~VC~Rfyr~~~de~lW~~--------------------lDl~~-------r~i 148 (419)
T KOG2120|consen 97 SWDSLPDEILLGIFSCLC-KKELLKVSGVCKRFYRLASDESLWQT--------------------LDLTG-------RNI 148 (419)
T ss_pred CcccCCHHHHHHHHHhcc-HHHHHHHHHHHHHHhhccccccceee--------------------eccCC-------Ccc
Confidence 368899999999999999 59999999999999999877655543 33332 122
Q ss_pred ChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhc-CCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCC
Q 015721 86 TDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSG-LCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVT 164 (402)
Q Consensus 86 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 164 (402)
.+..+..+.+ ..+..+.+... ...+..+...+.- -..|+++|+++.. ++...+..++..|.+|+.|.+.+. .+.
T Consensus 149 ~p~~l~~l~~--rgV~v~Rlar~-~~~~prlae~~~~frsRlq~lDLS~s~-it~stl~~iLs~C~kLk~lSlEg~-~Ld 223 (419)
T KOG2120|consen 149 HPDVLGRLLS--RGVIVFRLARS-FMDQPRLAEHFSPFRSRLQHLDLSNSV-ITVSTLHGILSQCSKLKNLSLEGL-RLD 223 (419)
T ss_pred ChhHHHHHHh--CCeEEEEcchh-hhcCchhhhhhhhhhhhhHHhhcchhh-eeHHHHHHHHHHHHhhhhcccccc-ccC
Confidence 2222222222 12333333210 0111111111111 1357777777643 666667777777777777777775 344
Q ss_pred hHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCC-CCh
Q 015721 165 DGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYK-VGD 243 (402)
Q Consensus 165 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~-~~~ 243 (402)
+.....+.+ -.+|+.|++++|..++..+...++.+|..|..|++++|....+..-..+..--++|+.|+++++.. +..
T Consensus 224 D~I~~~iAk-N~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~ 302 (419)
T KOG2120|consen 224 DPIVNTIAK-NSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQK 302 (419)
T ss_pred cHHHHHHhc-cccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhh
Confidence 444444444 467777777777777777777777777777888777776555442222222345677777776432 223
Q ss_pred HHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChH
Q 015721 244 KSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDA 323 (402)
Q Consensus 244 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~ 323 (402)
..+..+...+|+|..|+++.+..+++..+..+.. ++.|++|.++.|..+..+-+.. +...|.|.+|++.|| +.|.
T Consensus 303 sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~k--f~~L~~lSlsRCY~i~p~~~~~-l~s~psl~yLdv~g~--vsdt 377 (419)
T KOG2120|consen 303 SHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFK--FNYLQHLSLSRCYDIIPETLLE-LNSKPSLVYLDVFGC--VSDT 377 (419)
T ss_pred hHHHHHHHhCCceeeeccccccccCchHHHHHHh--cchheeeehhhhcCCChHHeee-eccCcceEEEEeccc--cCch
Confidence 3444556667777777777777777655555432 3677777777777666554443 566777777777764 3344
Q ss_pred HHHHHHhccCC
Q 015721 324 AFQDLGEVELS 334 (402)
Q Consensus 324 ~~~~~~~~~~~ 334 (402)
..+-+...+++
T Consensus 378 ~mel~~e~~~~ 388 (419)
T KOG2120|consen 378 TMELLKEMLSH 388 (419)
T ss_pred HHHHHHHhCcc
Confidence 45544444433
No 4
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=2.2e-14 Score=126.37 Aligned_cols=162 Identities=23% Similarity=0.286 Sum_probs=75.7
Q ss_pred CCCCEEEecCCCCCCh--HHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHh--cCCCcEEEccCCCCCChHH---HH
Q 015721 228 SSLKTLKLLDCYKVGD--KSILSLAKFCKNLETLIIGGCRDISDESIKHLAASC--KSSLKNLRMDWCLNISDSS---LS 300 (402)
Q Consensus 228 ~~L~~L~l~~~~~~~~--~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~--~~~L~~L~l~~~~~~~~~~---l~ 300 (402)
++|+.|+++++..... ..+......+++|+.|+++++ .+.+..+..+.... .++|++|+++++ .+++.. +.
T Consensus 137 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~l~~~l~~~~~L~~L~L~~n-~i~~~~~~~l~ 214 (319)
T cd00116 137 PALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANN-GIGDAGIRALAEGLKANCNLEVLDLNNN-GLTDEGASALA 214 (319)
T ss_pred CCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCC-CCchHHHHHHHHHHHhCCCCCEEeccCC-ccChHHHHHHH
Confidence 4555555555432211 112222333455666666554 34433333333222 136666666665 333322 22
Q ss_pred HHHhcCCCCcEEeccCCCCCChHHHHHHHhcc----CCCcEEEEeCCCCCHHHHH---HHHHhCCCCCEEeccCCCCCCH
Q 015721 301 CILSQCRNLEALDIGCCEEVTDAAFQDLGEVE----LSLKVLKVNCPKVTVVGIG---NVLEKCASLEYIDVRSCPHVTQ 373 (402)
Q Consensus 301 ~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~----~~L~~L~l~~~~~~~~~l~---~~~~~~~~L~~L~l~~c~~~~~ 373 (402)
..+..+++|++|++++| .+++..+..+.... ++|++|++.++.+++.+.. ..+..+++|+.++++++. +++
T Consensus 215 ~~~~~~~~L~~L~ls~n-~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~-l~~ 292 (319)
T cd00116 215 ETLASLKSLEVLNLGDN-NLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNK-FGE 292 (319)
T ss_pred HHhcccCCCCEEecCCC-cCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCC-CcH
Confidence 33445666666666664 34444444444332 3666666655555533332 333444566777776643 444
Q ss_pred hHHHhh---ccCC-CCcceEeccc
Q 015721 374 ASCEEA---GLQF-PQCCKVNFAG 393 (402)
Q Consensus 374 ~~~~~~---~~~~-p~l~~l~~~~ 393 (402)
+....+ ...+ +++..+++.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~ 316 (319)
T cd00116 293 EGAQLLAESLLEPGNELESLWVKD 316 (319)
T ss_pred HHHHHHHHHHhhcCCchhhcccCC
Confidence 332222 2223 4555555544
No 5
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.68 E-value=3.2e-14 Score=125.38 Aligned_cols=274 Identities=24% Similarity=0.256 Sum_probs=151.8
Q ss_pred hhHHHHHhhCCCCCEEEccCCCCCChhHH---HHHHhcCCCCCeEecCCCCCcC--hHH---HHHHHhcCccCcEEecCC
Q 015721 88 SDLAVIADGFKSLKLLNLQNCKGITDAGI---ASIGSGLCSLQSLDLSYCRKLT--DKG---LSAVAEGCQDLRSLHLAG 159 (402)
Q Consensus 88 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~---~~~~~~~~~L~~L~l~~~~~~~--~~~---~~~~~~~~~~L~~L~l~~ 159 (402)
..+..++..+++|+.|++.++. ++.... .......++|++++++++. +. ... +......+++|+.|++++
T Consensus 13 ~~~~~~~~~l~~L~~l~l~~~~-l~~~~~~~i~~~l~~~~~l~~l~l~~~~-~~~~~~~~~~~~~~l~~~~~L~~L~l~~ 90 (319)
T cd00116 13 ERATELLPKLLCLQVLRLEGNT-LGEEAAKALASALRPQPSLKELCLSLNE-TGRIPRGLQSLLQGLTKGCGLQELDLSD 90 (319)
T ss_pred cchHHHHHHHhhccEEeecCCC-CcHHHHHHHHHHHhhCCCceEEeccccc-cCCcchHHHHHHHHHHhcCceeEEEccC
Confidence 3344444556667777777754 443332 2223345667777776644 33 111 223334466777777777
Q ss_pred CccCC--hHHHHHHHHhCCCCcEEecCCCCCCchHHHH---HHHhcC-CCCCEEccCCCCCCCc--ccHHHHHhcCCCCC
Q 015721 160 CKSVT--DGTLQALSKNCRNLEELGLLGCTSISDSGVI---DLVNGC-QNIKFLDLNKCSNIGD--NGISSVSKSCSSLK 231 (402)
Q Consensus 160 ~~~~~--~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~---~~~~~~-~~L~~L~l~~~~~~~~--~~~~~~~~~~~~L~ 231 (402)
+.... ...+..+... ++|++|+++++. +++.+.. ..+..+ ++|+.|+++++..... ..+......+++|+
T Consensus 91 ~~~~~~~~~~~~~l~~~-~~L~~L~ls~~~-~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~ 168 (319)
T cd00116 91 NALGPDGCGVLESLLRS-SSLQELKLNNNG-LGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLK 168 (319)
T ss_pred CCCChhHHHHHHHHhcc-CcccEEEeeCCc-cchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcC
Confidence 64321 1222233333 458888887743 4432222 234455 7778888877553321 11233344556788
Q ss_pred EEEecCCCCCChHHHHHH---HHhCCCCcEEEecCCCCCChHHHHHHHHHh--cCCCcEEEccCCCCCChHHHHHHHhcC
Q 015721 232 TLKLLDCYKVGDKSILSL---AKFCKNLETLIIGGCRDISDESIKHLAASC--KSSLKNLRMDWCLNISDSSLSCILSQC 306 (402)
Q Consensus 232 ~L~l~~~~~~~~~~~~~~---~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~--~~~L~~L~l~~~~~~~~~~l~~~l~~~ 306 (402)
+|+++++. +.+.....+ ....++|+.|+++++ .+++.....+.... .++|++|+++++ .+++..+..+...+
T Consensus 169 ~L~l~~n~-l~~~~~~~l~~~l~~~~~L~~L~L~~n-~i~~~~~~~l~~~~~~~~~L~~L~ls~n-~l~~~~~~~l~~~~ 245 (319)
T cd00116 169 ELNLANNG-IGDAGIRALAEGLKANCNLEVLDLNNN-GLTDEGASALAETLASLKSLEVLNLGDN-NLTDAGAAALASAL 245 (319)
T ss_pred EEECcCCC-CchHHHHHHHHHHHhCCCCCEEeccCC-ccChHHHHHHHHHhcccCCCCEEecCCC-cCchHHHHHHHHHH
Confidence 88887753 443333333 233458888888776 44544444443221 267888888887 56655555544443
Q ss_pred ----CCCcEEeccCCCCCChHHHHHHH---hccCCCcEEEEeCCCCCHHHHHHH---HHhC-CCCCEEeccCCC
Q 015721 307 ----RNLEALDIGCCEEVTDAAFQDLG---EVELSLKVLKVNCPKVTVVGIGNV---LEKC-ASLEYIDVRSCP 369 (402)
Q Consensus 307 ----~~L~~L~l~~~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~~~~~l~~~---~~~~-~~L~~L~l~~c~ 369 (402)
+.|++|++.+|. +++.+...+. ...++|+.++++.|.++..+...+ +... +.|+.+++.+.|
T Consensus 246 ~~~~~~L~~L~l~~n~-i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 246 LSPNISLLTLSLSCND-ITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred hccCCCceEEEccCCC-CCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 688888888754 4443433332 233478888887788876654433 2333 578888877644
No 6
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.67 E-value=1.2e-15 Score=154.01 Aligned_cols=303 Identities=22% Similarity=0.174 Sum_probs=167.7
Q ss_pred HHHhcCcceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChH
Q 015721 61 IAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDK 140 (402)
Q Consensus 61 ~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 140 (402)
....+++|+.|+++++... ..+. ..+...+++|++|+++++. +.... +. ..+++|++|+++++. +..
T Consensus 88 ~~~~l~~L~~L~Ls~n~~~---~~ip----~~~~~~l~~L~~L~Ls~n~-l~~~~-p~--~~l~~L~~L~Ls~n~-~~~- 154 (968)
T PLN00113 88 AIFRLPYIQTINLSNNQLS---GPIP----DDIFTTSSSLRYLNLSNNN-FTGSI-PR--GSIPNLETLDLSNNM-LSG- 154 (968)
T ss_pred HHhCCCCCCEEECCCCccC---CcCC----hHHhccCCCCCEEECcCCc-ccccc-Cc--cccCCCCEEECcCCc-ccc-
Confidence 3445667777777654310 0111 1122346677777777643 22111 11 245677777777654 321
Q ss_pred HHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccH
Q 015721 141 GLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGI 220 (402)
Q Consensus 141 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 220 (402)
.++.....+++|++|+++++... . .++....++++|++|+++++. +.. .++..+..+++|+.|+++++..... +
T Consensus 155 ~~p~~~~~l~~L~~L~L~~n~l~-~-~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~l~~l~~L~~L~L~~n~l~~~--~ 228 (968)
T PLN00113 155 EIPNDIGSFSSLKVLDLGGNVLV-G-KIPNSLTNLTSLEFLTLASNQ-LVG-QIPRELGQMKSLKWIYLGYNNLSGE--I 228 (968)
T ss_pred cCChHHhcCCCCCEEECccCccc-c-cCChhhhhCcCCCeeeccCCC-CcC-cCChHHcCcCCccEEECcCCccCCc--C
Confidence 23334456777888888775322 1 122233447778888877643 221 1334556677888888876543222 3
Q ss_pred HHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCC--ChHHHHHHHHHhcCCCcEEEccCCCCCChHH
Q 015721 221 SSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDI--SDESIKHLAASCKSSLKNLRMDWCLNISDSS 298 (402)
Q Consensus 221 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~--~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~ 298 (402)
+.....+++|++|+++++.... ..+.....+++|+.|+++++... .+..+..+ ++|++|+++++ .+.. .
T Consensus 229 p~~l~~l~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~Ls~n-~l~~-~ 299 (968)
T PLN00113 229 PYEIGGLTSLNHLDLVYNNLTG--PIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSL-----QKLISLDLSDN-SLSG-E 299 (968)
T ss_pred ChhHhcCCCCCEEECcCceecc--ccChhHhCCCCCCEEECcCCeeeccCchhHhhc-----cCcCEEECcCC-eecc-C
Confidence 3344567788888887653221 12334445778888888765321 12223332 78888888776 3332 2
Q ss_pred HHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHh
Q 015721 299 LSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEE 378 (402)
Q Consensus 299 l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~ 378 (402)
++..+..+++|+.|+++++. +.......+ ...++|+.|++..+.++.. +...+..+++|+.|++++|.. .......
T Consensus 300 ~p~~~~~l~~L~~L~l~~n~-~~~~~~~~~-~~l~~L~~L~L~~n~l~~~-~p~~l~~~~~L~~L~Ls~n~l-~~~~p~~ 375 (968)
T PLN00113 300 IPELVIQLQNLEILHLFSNN-FTGKIPVAL-TSLPRLQVLQLWSNKFSGE-IPKNLGKHNNLTVLDLSTNNL-TGEIPEG 375 (968)
T ss_pred CChhHcCCCCCcEEECCCCc-cCCcCChhH-hcCCCCCEEECcCCCCcCc-CChHHhCCCCCcEEECCCCee-EeeCChh
Confidence 34446778888888888754 322222222 3445888888855555432 233445778888888887642 2222222
Q ss_pred hccCCCCcceEecccccc
Q 015721 379 AGLQFPQCCKVNFAGCLF 396 (402)
Q Consensus 379 ~~~~~p~l~~l~~~~~~~ 396 (402)
+. ..+++..+++.+|..
T Consensus 376 ~~-~~~~L~~L~l~~n~l 392 (968)
T PLN00113 376 LC-SSGNLFKLILFSNSL 392 (968)
T ss_pred Hh-CcCCCCEEECcCCEe
Confidence 22 466777888777653
No 7
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.67 E-value=1.7e-15 Score=152.93 Aligned_cols=14 Identities=21% Similarity=0.316 Sum_probs=6.8
Q ss_pred HhcCCCCcEEeccC
Q 015721 303 LSQCRNLEALDIGC 316 (402)
Q Consensus 303 l~~~~~L~~L~l~~ 316 (402)
+..+++|+.|++++
T Consensus 328 ~~~l~~L~~L~L~~ 341 (968)
T PLN00113 328 LTSLPRLQVLQLWS 341 (968)
T ss_pred HhcCCCCCEEECcC
Confidence 34445555555544
No 8
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=99.66 E-value=1.4e-15 Score=141.99 Aligned_cols=140 Identities=36% Similarity=0.724 Sum_probs=65.7
Q ss_pred hcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCC-CCCCch--HHHHHHHhcCCCCCEEccCCCCCCCcccHHHH
Q 015721 147 EGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLG-CTSISD--SGVIDLVNGCQNIKFLDLNKCSNIGDNGISSV 223 (402)
Q Consensus 147 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~~--~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 223 (402)
..++.|+.+.+.++..+.+..+..+...+++|+.|++.+ +..... .........+++|+.|+++++..+++.++..+
T Consensus 185 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 185 SSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred hhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 334555555555554444433334444455555555543 111111 11222333445555555555444555555555
Q ss_pred HhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEE
Q 015721 224 SKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLR 287 (402)
Q Consensus 224 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~ 287 (402)
...|++|++|.+..|..+++.++..+...+++|+.|++++|..+++..+..+...| ++|+.|.
T Consensus 265 ~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c-~~l~~l~ 327 (482)
T KOG1947|consen 265 ASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNC-PNLRELK 327 (482)
T ss_pred HhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhC-cchhhhh
Confidence 54455555555444444455555555555555555555555555454444444443 4444443
No 9
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.65 E-value=1.3e-15 Score=154.18 Aligned_cols=130 Identities=18% Similarity=0.407 Sum_probs=78.5
Q ss_pred CCCCcEEEecCCCCCCh--HHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHh
Q 015721 253 CKNLETLIIGGCRDISD--ESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGE 330 (402)
Q Consensus 253 ~~~L~~L~l~~~~~~~~--~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~ 330 (402)
+++|+.|+++++..... ..+. .+ ++|+.|++++|..+. .++... .+++|+.|++++|..+.. + ..
T Consensus 777 ~~sL~~L~Ls~n~~l~~lP~si~----~L-~~L~~L~Ls~C~~L~--~LP~~~-~L~sL~~L~Ls~c~~L~~--~---p~ 843 (1153)
T PLN03210 777 SPSLTRLFLSDIPSLVELPSSIQ----NL-HKLEHLEIENCINLE--TLPTGI-NLESLESLDLSGCSRLRT--F---PD 843 (1153)
T ss_pred cccchheeCCCCCCccccChhhh----CC-CCCCEEECCCCCCcC--eeCCCC-CccccCEEECCCCCcccc--c---cc
Confidence 35677777766543221 1122 22 677777777775544 222212 567777777777765522 1 12
Q ss_pred ccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcceEeccccccCCc
Q 015721 331 VELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNFAGCLFEPD 399 (402)
Q Consensus 331 ~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~ 399 (402)
..++|+.|++..+.++. ++..+..+++|+.|++++|+.+.. +......++++..+++.+|+.+++
T Consensus 844 ~~~nL~~L~Ls~n~i~~--iP~si~~l~~L~~L~L~~C~~L~~--l~~~~~~L~~L~~L~l~~C~~L~~ 908 (1153)
T PLN03210 844 ISTNISDLNLSRTGIEE--VPWWIEKFSNLSFLDMNGCNNLQR--VSLNISKLKHLETVDFSDCGALTE 908 (1153)
T ss_pred cccccCEeECCCCCCcc--ChHHHhcCCCCCEEECCCCCCcCc--cCcccccccCCCeeecCCCccccc
Confidence 23477888886666664 334456788888888888887753 323333567777888888877654
No 10
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=7.7e-16 Score=124.38 Aligned_cols=204 Identities=22% Similarity=0.342 Sum_probs=163.0
Q ss_pred CCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCC
Q 015721 176 RNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKN 255 (402)
Q Consensus 176 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 255 (402)
.+|++|+++. ..++...+..++++|.+|+.|.+.+. .+.+.....+ +.-.+|+.|+++.+..++..++..++..|..
T Consensus 185 sRlq~lDLS~-s~it~stl~~iLs~C~kLk~lSlEg~-~LdD~I~~~i-AkN~~L~~lnlsm~sG~t~n~~~ll~~scs~ 261 (419)
T KOG2120|consen 185 SRLQHLDLSN-SVITVSTLHGILSQCSKLKNLSLEGL-RLDDPIVNTI-AKNSNLVRLNLSMCSGFTENALQLLLSSCSR 261 (419)
T ss_pred hhhHHhhcch-hheeHHHHHHHHHHHHhhhhcccccc-ccCcHHHHHH-hccccceeeccccccccchhHHHHHHHhhhh
Confidence 5799999998 77888888999999999999999984 4444433334 3567899999999999999888889999999
Q ss_pred CcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCC-CCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCC
Q 015721 256 LETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCL-NISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELS 334 (402)
Q Consensus 256 L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~-~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 334 (402)
|..|+++.|....+ .+..+..+..++|+.|+++|+. ++....+..+.+.||+|..|++++|..+++..+..+.+.. .
T Consensus 262 L~~LNlsWc~l~~~-~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~-~ 339 (419)
T KOG2120|consen 262 LDELNLSWCFLFTE-KVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFN-Y 339 (419)
T ss_pred HhhcCchHhhccch-hhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcc-h
Confidence 99999999854444 4777777778999999999874 3445567778889999999999999999998888777665 9
Q ss_pred CcEEEE-eCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcc
Q 015721 335 LKVLKV-NCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCC 387 (402)
Q Consensus 335 L~~L~l-~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~ 387 (402)
|++|.+ .|..+....+..+ ...|+|.+|++.+|- ++...+-+....|+++
T Consensus 340 L~~lSlsRCY~i~p~~~~~l-~s~psl~yLdv~g~v--sdt~mel~~e~~~~lk 390 (419)
T KOG2120|consen 340 LQHLSLSRCYDIIPETLLEL-NSKPSLVYLDVFGCV--SDTTMELLKEMLSHLK 390 (419)
T ss_pred heeeehhhhcCCChHHeeee-ccCcceEEEEecccc--CchHHHHHHHhCcccc
Confidence 999999 8888776555433 578999999999974 4556666666677654
No 11
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=99.62 E-value=3.2e-15 Score=139.68 Aligned_cols=285 Identities=31% Similarity=0.505 Sum_probs=184.1
Q ss_pred hhCCCCCEEEccCCCC-CChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCC-ccCC--hHHHHH
Q 015721 95 DGFKSLKLLNLQNCKG-ITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGC-KSVT--DGTLQA 170 (402)
Q Consensus 95 ~~~~~L~~L~l~~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~-~~~~--~~~~~~ 170 (402)
.....++.+....+.. ........+...+++|+.+.+..+..+.+.....+...+++|++|+++++ .... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 237 (482)
T KOG1947|consen 158 RGLANLESLSLSCCGSLLLDKILLRLLSSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLL 237 (482)
T ss_pred HHHHHHheeeeecccccccHHHHHHHHhhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhh
Confidence 3445666666665442 33344555555678888888888877777666677777888888888762 2222 122334
Q ss_pred HHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHH
Q 015721 171 LSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLA 250 (402)
Q Consensus 171 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 250 (402)
+...+++|+.|++..+..+++.++..+...|++|+.|.+.+|..+++.++..+...++.|++|+++.|..+++.++..+.
T Consensus 238 ~~~~~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~ 317 (482)
T KOG1947|consen 238 LLSICRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALL 317 (482)
T ss_pred hhhhcCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHH
Confidence 55567888888888876678887777777788888888888777788888888888888888888888888777777777
Q ss_pred HhCCCCcEEEecCCC---CCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCc-EEeccCCCCCChHHHH
Q 015721 251 KFCKNLETLIIGGCR---DISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLE-ALDIGCCEEVTDAAFQ 326 (402)
Q Consensus 251 ~~~~~L~~L~l~~~~---~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~-~L~l~~~~~~~~~~~~ 326 (402)
..+++++.|.+..+. .+++..+..........+..+.+.+++++++..+.... ..... .+.+.+|..++ ..+.
T Consensus 318 ~~c~~l~~l~~~~~~~c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~~l~gc~~l~-~~l~ 394 (482)
T KOG1947|consen 318 KNCPNLRELKLLSLNGCPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCG--ISDLGLELSLRGCPNLT-ESLE 394 (482)
T ss_pred HhCcchhhhhhhhcCCCccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhh--ccCcchHHHhcCCcccc-hHHH
Confidence 778887777665443 23333333322211013444444444444433333211 11111 34444555554 4444
Q ss_pred HHHhccCCCcEEEE-eCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccC
Q 015721 327 DLGEVELSLKVLKV-NCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQ 382 (402)
Q Consensus 327 ~~~~~~~~L~~L~l-~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~ 382 (402)
.......+++.|.+ .|...+...+......+..++.+.+.+|+.+...........
T Consensus 395 ~~~~~~~~l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 451 (482)
T KOG1947|consen 395 LRLCRSDSLRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCRVITLKSLEGFASN 451 (482)
T ss_pred HHhccCCccceEecccCccccccchHHHhhhhhccccCCccCcccccchhhhhhhcc
Confidence 44444434788888 777777777766655588888999999988888777665544
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.48 E-value=2.3e-13 Score=138.06 Aligned_cols=249 Identities=18% Similarity=0.280 Sum_probs=127.6
Q ss_pred cCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcC
Q 015721 122 GLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGC 201 (402)
Q Consensus 122 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 201 (402)
.+++|+.|+++++..+.. ++. ...+++|++|++.+|..+.. ++....++++|+.|++.+|..+.. ++..+ ++
T Consensus 632 ~l~~Lk~L~Ls~~~~l~~--ip~-ls~l~~Le~L~L~~c~~L~~--lp~si~~L~~L~~L~L~~c~~L~~--Lp~~i-~l 703 (1153)
T PLN03210 632 SLTGLRNIDLRGSKNLKE--IPD-LSMATNLETLKLSDCSSLVE--LPSSIQYLNKLEDLDMSRCENLEI--LPTGI-NL 703 (1153)
T ss_pred cCCCCCEEECCCCCCcCc--CCc-cccCCcccEEEecCCCCccc--cchhhhccCCCCEEeCCCCCCcCc--cCCcC-CC
Confidence 345555555554432221 111 22345555555555543322 222333455555555555543332 11111 34
Q ss_pred CCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCC--h--HHHHHHHH
Q 015721 202 QNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDIS--D--ESIKHLAA 277 (402)
Q Consensus 202 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~--~--~~~~~l~~ 277 (402)
++|+.|.+++|..+.. ++. ..++|+.|++.++. +. .++... .+++|++|.+.++.... . ..+..+..
T Consensus 704 ~sL~~L~Lsgc~~L~~--~p~---~~~nL~~L~L~~n~-i~--~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~ 774 (1153)
T PLN03210 704 KSLYRLNLSGCSRLKS--FPD---ISTNISWLDLDETA-IE--EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMT 774 (1153)
T ss_pred CCCCEEeCCCCCCccc--ccc---ccCCcCeeecCCCc-cc--cccccc-cccccccccccccchhhccccccccchhhh
Confidence 5555555555543322 111 12445555555432 11 111111 24556666654432100 0 00011111
Q ss_pred HhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEE-eCCCCCHHHHHHHHHh
Q 015721 278 SCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKV-NCPKVTVVGIGNVLEK 356 (402)
Q Consensus 278 ~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l-~~~~~~~~~l~~~~~~ 356 (402)
..+++|+.|+++++..+. .++..+.++++|+.|++++|..+.. ++... .+++|+.|++ +|+.+... . ..
T Consensus 775 ~~~~sL~~L~Ls~n~~l~--~lP~si~~L~~L~~L~Ls~C~~L~~--LP~~~-~L~sL~~L~Ls~c~~L~~~--p---~~ 844 (1153)
T PLN03210 775 MLSPSLTRLFLSDIPSLV--ELPSSIQNLHKLEHLEIENCINLET--LPTGI-NLESLESLDLSGCSRLRTF--P---DI 844 (1153)
T ss_pred hccccchheeCCCCCCcc--ccChhhhCCCCCCEEECCCCCCcCe--eCCCC-CccccCEEECCCCCccccc--c---cc
Confidence 224688888888875544 3455577889999999988876543 22211 3458889998 77666532 1 23
Q ss_pred CCCCCEEeccCCCCCCHhHHHhhccCCCCcceEeccccccCCcC
Q 015721 357 CASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNFAGCLFEPDV 400 (402)
Q Consensus 357 ~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~ 400 (402)
.++|+.|+++++ .+. .++.....++++..+++.||.++..+
T Consensus 845 ~~nL~~L~Ls~n-~i~--~iP~si~~l~~L~~L~L~~C~~L~~l 885 (1153)
T PLN03210 845 STNISDLNLSRT-GIE--EVPWWIEKFSNLSFLDMNGCNNLQRV 885 (1153)
T ss_pred ccccCEeECCCC-CCc--cChHHHhcCCCCCEEECCCCCCcCcc
Confidence 468889998874 343 22333347999999999999887653
No 13
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.41 E-value=2e-15 Score=134.13 Aligned_cols=154 Identities=14% Similarity=0.169 Sum_probs=82.2
Q ss_pred CCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcC
Q 015721 227 CSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQC 306 (402)
Q Consensus 227 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~ 306 (402)
+.+|+.++++.+ .+. .++.....+++|+.|+++++ .++.-.+.. .. ..+|++|+++.+ .++ .++..+..+
T Consensus 221 l~NL~dvDlS~N-~Lp--~vPecly~l~~LrrLNLS~N-~iteL~~~~--~~-W~~lEtLNlSrN-QLt--~LP~avcKL 290 (1255)
T KOG0444|consen 221 LHNLRDVDLSEN-NLP--IVPECLYKLRNLRRLNLSGN-KITELNMTE--GE-WENLETLNLSRN-QLT--VLPDAVCKL 290 (1255)
T ss_pred hhhhhhcccccc-CCC--cchHHHhhhhhhheeccCcC-ceeeeeccH--HH-Hhhhhhhccccc-hhc--cchHHHhhh
Confidence 344555555542 222 12333334566777777663 233211110 11 156777777665 344 455566677
Q ss_pred CCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCc
Q 015721 307 RNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQC 386 (402)
Q Consensus 307 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l 386 (402)
++|+.|.+.+ +.++.++++.-.....+|+.+....|.+.. ++..+.+|+.|+.|.++.+.-+ .+++...-+|.+
T Consensus 291 ~kL~kLy~n~-NkL~FeGiPSGIGKL~~Levf~aanN~LEl--VPEglcRC~kL~kL~L~~NrLi---TLPeaIHlL~~l 364 (1255)
T KOG0444|consen 291 TKLTKLYANN-NKLTFEGIPSGIGKLIQLEVFHAANNKLEL--VPEGLCRCVKLQKLKLDHNRLI---TLPEAIHLLPDL 364 (1255)
T ss_pred HHHHHHHhcc-CcccccCCccchhhhhhhHHHHhhcccccc--CchhhhhhHHHHHhccccccee---echhhhhhcCCc
Confidence 7888887775 445555554333323355555554444443 3444567777777777654433 233333456777
Q ss_pred ceEecccccc
Q 015721 387 CKVNFAGCLF 396 (402)
Q Consensus 387 ~~l~~~~~~~ 396 (402)
+.+++..+|+
T Consensus 365 ~vLDlreNpn 374 (1255)
T KOG0444|consen 365 KVLDLRENPN 374 (1255)
T ss_pred ceeeccCCcC
Confidence 7777777665
No 14
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.37 E-value=5.5e-14 Score=123.89 Aligned_cols=278 Identities=21% Similarity=0.215 Sum_probs=128.6
Q ss_pred HHHhcCcceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChH
Q 015721 61 IAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDK 140 (402)
Q Consensus 61 ~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 140 (402)
+.....++++|++.++. ...+....+ .+.|.||+|+++... +.......+ ..-.++++|++.++. +++-
T Consensus 120 f~~~sghl~~L~L~~N~----I~sv~se~L----~~l~alrslDLSrN~-is~i~~~sf-p~~~ni~~L~La~N~-It~l 188 (873)
T KOG4194|consen 120 FGHESGHLEKLDLRHNL----ISSVTSEEL----SALPALRSLDLSRNL-ISEIPKPSF-PAKVNIKKLNLASNR-ITTL 188 (873)
T ss_pred ccccccceeEEeeeccc----cccccHHHH----HhHhhhhhhhhhhch-hhcccCCCC-CCCCCceEEeecccc-cccc
Confidence 33445678888888765 344444433 345667777766522 332222222 122456666666543 3321
Q ss_pred HHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcC-------------------
Q 015721 141 GLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGC------------------- 201 (402)
Q Consensus 141 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~------------------- 201 (402)
.... +..+.+|..|.++.+.. +. .....++.+|+|+.|++.. +.+.... ...++++
T Consensus 189 ~~~~-F~~lnsL~tlkLsrNri-tt-Lp~r~Fk~L~~L~~LdLnr-N~irive-~ltFqgL~Sl~nlklqrN~I~kL~DG 263 (873)
T KOG4194|consen 189 ETGH-FDSLNSLLTLKLSRNRI-TT-LPQRSFKRLPKLESLDLNR-NRIRIVE-GLTFQGLPSLQNLKLQRNDISKLDDG 263 (873)
T ss_pred cccc-ccccchheeeecccCcc-cc-cCHHHhhhcchhhhhhccc-cceeeeh-hhhhcCchhhhhhhhhhcCcccccCc
Confidence 1111 12234455555554321 11 1122233355555555543 2221110 1122333
Q ss_pred -----CCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCC--CCChHHHHH
Q 015721 202 -----QNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCR--DISDESIKH 274 (402)
Q Consensus 202 -----~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~--~~~~~~~~~ 274 (402)
.++++|+++.++. ... -..+.-+++.|++|+++++ .+.... ......+++|+.|+++.+. .+.+..+..
T Consensus 264 ~Fy~l~kme~l~L~~N~l-~~v-n~g~lfgLt~L~~L~lS~N-aI~rih-~d~WsftqkL~~LdLs~N~i~~l~~~sf~~ 339 (873)
T KOG4194|consen 264 AFYGLEKMEHLNLETNRL-QAV-NEGWLFGLTSLEQLDLSYN-AIQRIH-IDSWSFTQKLKELDLSSNRITRLDEGSFRV 339 (873)
T ss_pred ceeeecccceeecccchh-hhh-hcccccccchhhhhccchh-hhheee-cchhhhcccceeEeccccccccCChhHHHH
Confidence 4444444443211 100 0112223455666666553 221111 1223336777777776542 233445555
Q ss_pred HHHHhcCCCcEEEccCCCCCChHHH-HHHHhcCCCCcEEeccCCC---CCChHHHHHHHhccCCCcEEEEeCCCCCHHHH
Q 015721 275 LAASCKSSLKNLRMDWCLNISDSSL-SCILSQCRNLEALDIGCCE---EVTDAAFQDLGEVELSLKVLKVNCPKVTVVGI 350 (402)
Q Consensus 275 l~~~~~~~L~~L~l~~~~~~~~~~l-~~~l~~~~~L~~L~l~~~~---~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l 350 (402)
+ ..|++|.++.+ .++ .+ ...+..+.+|+.|+++++. .+.| +... ....++|+.|.+..|++...+-
T Consensus 340 L-----~~Le~LnLs~N-si~--~l~e~af~~lssL~~LdLr~N~ls~~IED-aa~~-f~gl~~LrkL~l~gNqlk~I~k 409 (873)
T KOG4194|consen 340 L-----SQLEELNLSHN-SID--HLAEGAFVGLSSLHKLDLRSNELSWCIED-AAVA-FNGLPSLRKLRLTGNQLKSIPK 409 (873)
T ss_pred H-----HHhhhhccccc-chH--HHHhhHHHHhhhhhhhcCcCCeEEEEEec-chhh-hccchhhhheeecCceeeecch
Confidence 4 66777777665 232 12 1235566677777776532 1222 1122 2224577777776666666655
Q ss_pred HHHHHhCCCCCEEeccCCC
Q 015721 351 GNVLEKCASLEYIDVRSCP 369 (402)
Q Consensus 351 ~~~~~~~~~L~~L~l~~c~ 369 (402)
..+ ..++.|++|++.+++
T Consensus 410 rAf-sgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 410 RAF-SGLEALEHLDLGDNA 427 (873)
T ss_pred hhh-ccCcccceecCCCCc
Confidence 544 357777777776643
No 15
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.31 E-value=1.8e-13 Score=120.68 Aligned_cols=191 Identities=17% Similarity=0.116 Sum_probs=119.3
Q ss_pred CCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCC
Q 015721 175 CRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCK 254 (402)
Q Consensus 175 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 254 (402)
+.++++|++.. +.++.. -..++.++.+|+.|+++++. +.......+ ..+++|+.|+++++. ++.....+ +..+.
T Consensus 268 l~kme~l~L~~-N~l~~v-n~g~lfgLt~L~~L~lS~Na-I~rih~d~W-sftqkL~~LdLs~N~-i~~l~~~s-f~~L~ 341 (873)
T KOG4194|consen 268 LEKMEHLNLET-NRLQAV-NEGWLFGLTSLEQLDLSYNA-IQRIHIDSW-SFTQKLKELDLSSNR-ITRLDEGS-FRVLS 341 (873)
T ss_pred ecccceeeccc-chhhhh-hcccccccchhhhhccchhh-hheeecchh-hhcccceeEeccccc-cccCChhH-HHHHH
Confidence 67788888876 333321 12456678999999999843 333222333 257899999999853 33222122 23367
Q ss_pred CCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCC---CCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhc
Q 015721 255 NLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCL---NISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEV 331 (402)
Q Consensus 255 ~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~---~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 331 (402)
+|+.|.++.+. + ..+...+..+..+|++|+++++. -+.| -...+..+++|++|.+.| +++....-..+. .
T Consensus 342 ~Le~LnLs~Ns-i--~~l~e~af~~lssL~~LdLr~N~ls~~IED--aa~~f~gl~~LrkL~l~g-Nqlk~I~krAfs-g 414 (873)
T KOG4194|consen 342 QLEELNLSHNS-I--DHLAEGAFVGLSSLHKLDLRSNELSWCIED--AAVAFNGLPSLRKLRLTG-NQLKSIPKRAFS-G 414 (873)
T ss_pred Hhhhhcccccc-h--HHHHhhHHHHhhhhhhhcCcCCeEEEEEec--chhhhccchhhhheeecC-ceeeecchhhhc-c
Confidence 89999997742 2 12222222334899999998762 1222 233467899999999998 445443334443 3
Q ss_pred cCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhc
Q 015721 332 ELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAG 380 (402)
Q Consensus 332 ~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~ 380 (402)
+++|++|+++.|.+.......+- .+ .|++|.+..-..+.|-.+.|+.
T Consensus 415 l~~LE~LdL~~NaiaSIq~nAFe-~m-~Lk~Lv~nSssflCDCql~Wl~ 461 (873)
T KOG4194|consen 415 LEALEHLDLGDNAIASIQPNAFE-PM-ELKELVMNSSSFLCDCQLKWLA 461 (873)
T ss_pred CcccceecCCCCcceeecccccc-cc-hhhhhhhcccceEEeccHHHHH
Confidence 44999999988887766555553 34 8888888876666666666655
No 16
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.25 E-value=3.4e-12 Score=108.90 Aligned_cols=210 Identities=19% Similarity=0.136 Sum_probs=97.5
Q ss_pred CccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCC
Q 015721 149 CQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCS 228 (402)
Q Consensus 149 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 228 (402)
+.+|+++.+.+++ +...+.....+.||+++.|+++.+-......+..+..++|+|+.|.++.+......+ ......++
T Consensus 120 ~kkL~~IsLdn~~-V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~-s~~~~~l~ 197 (505)
T KOG3207|consen 120 LKKLREISLDNYR-VEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFIS-SNTTLLLS 197 (505)
T ss_pred HHhhhheeecCcc-ccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcc-ccchhhhh
Confidence 4445555555442 222222233334555555555553222334444555566666666665532211100 01111345
Q ss_pred CCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCC
Q 015721 229 SLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRN 308 (402)
Q Consensus 229 ~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~ 308 (402)
+|++|.+++|. ++...+..+...+|+|+.|.+.++.... ........+..|++|+|+++..++.+.+. ....+|.
T Consensus 198 ~lK~L~l~~CG-ls~k~V~~~~~~fPsl~~L~L~~N~~~~---~~~~~~~i~~~L~~LdLs~N~li~~~~~~-~~~~l~~ 272 (505)
T KOG3207|consen 198 HLKQLVLNSCG-LSWKDVQWILLTFPSLEVLYLEANEIIL---IKATSTKILQTLQELDLSNNNLIDFDQGY-KVGTLPG 272 (505)
T ss_pred hhheEEeccCC-CCHHHHHHHHHhCCcHHHhhhhcccccc---eecchhhhhhHHhhccccCCccccccccc-ccccccc
Confidence 66666666653 3444555555556677766665542111 11111112356666777666444433333 2556666
Q ss_pred CcEEeccCCCCCChHH-----HHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEecc
Q 015721 309 LEALDIGCCEEVTDAA-----FQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVR 366 (402)
Q Consensus 309 L~~L~l~~~~~~~~~~-----~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~ 366 (402)
|+.|+++.+. +.+.. .......+++|+.|.++.|++.+..--.-+..+++|+.|.+.
T Consensus 273 L~~Lnls~tg-i~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~ 334 (505)
T KOG3207|consen 273 LNQLNLSSTG-IASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRIT 334 (505)
T ss_pred hhhhhccccC-cchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcc
Confidence 6666666532 21111 111223345677777755555332222223345556655543
No 17
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.23 E-value=3.5e-13 Score=120.11 Aligned_cols=249 Identities=19% Similarity=0.204 Sum_probs=156.5
Q ss_pred CCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCC
Q 015721 97 FKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCR 176 (402)
Q Consensus 97 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 176 (402)
.+++-.|++++.. +.... ..+.-++..|-.|+++++. +.. +|.-...+.+|++|++++++. ....+..+.+ ++
T Consensus 125 AKn~iVLNLS~N~-IetIP-n~lfinLtDLLfLDLS~Nr-Le~--LPPQ~RRL~~LqtL~Ls~NPL-~hfQLrQLPs-mt 197 (1255)
T KOG0444|consen 125 AKNSIVLNLSYNN-IETIP-NSLFINLTDLLFLDLSNNR-LEM--LPPQIRRLSMLQTLKLSNNPL-NHFQLRQLPS-MT 197 (1255)
T ss_pred hcCcEEEEcccCc-cccCC-chHHHhhHhHhhhccccch-hhh--cCHHHHHHhhhhhhhcCCChh-hHHHHhcCcc-ch
Confidence 4566667776632 33322 2222345566677777654 332 222334577888888888642 2222333322 55
Q ss_pred CCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCC
Q 015721 177 NLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNL 256 (402)
Q Consensus 177 ~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L 256 (402)
+|+.|++++ +.-+-..++..+..+.+|..++++.+ .+.. ++.-...+++|+.|+++++ .++.. ........+|
T Consensus 198 sL~vLhms~-TqRTl~N~Ptsld~l~NL~dvDlS~N-~Lp~--vPecly~l~~LrrLNLS~N-~iteL--~~~~~~W~~l 270 (1255)
T KOG0444|consen 198 SLSVLHMSN-TQRTLDNIPTSLDDLHNLRDVDLSEN-NLPI--VPECLYKLRNLRRLNLSGN-KITEL--NMTEGEWENL 270 (1255)
T ss_pred hhhhhhccc-ccchhhcCCCchhhhhhhhhcccccc-CCCc--chHHHhhhhhhheeccCcC-ceeee--eccHHHHhhh
Confidence 666677776 33333344555666788888898873 3332 4555567889999999985 44432 1222235789
Q ss_pred cEEEecCCCCCC--hHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCC
Q 015721 257 ETLIIGGCRDIS--DESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELS 334 (402)
Q Consensus 257 ~~L~l~~~~~~~--~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 334 (402)
++|+++.+ .++ +..+-.+ +.|+.|...++ .++-++++.-++.+.+|+.+...++ .+ +.++.-.+.|+.
T Consensus 271 EtLNlSrN-QLt~LP~avcKL-----~kL~kLy~n~N-kL~FeGiPSGIGKL~~Levf~aanN-~L--ElVPEglcRC~k 340 (1255)
T KOG0444|consen 271 ETLNLSRN-QLTVLPDAVCKL-----TKLTKLYANNN-KLTFEGIPSGIGKLIQLEVFHAANN-KL--ELVPEGLCRCVK 340 (1255)
T ss_pred hhhccccc-hhccchHHHhhh-----HHHHHHHhccC-cccccCCccchhhhhhhHHHHhhcc-cc--ccCchhhhhhHH
Confidence 99999874 333 3334444 67777777665 6666677777788888898888863 33 344555566669
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCC
Q 015721 335 LKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHV 371 (402)
Q Consensus 335 L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~ 371 (402)
|+.|.+++|.+-. ++..+.-+|.|+.|++..+|.+
T Consensus 341 L~kL~L~~NrLiT--LPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 341 LQKLKLDHNRLIT--LPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred HHHhcccccceee--chhhhhhcCCcceeeccCCcCc
Confidence 9999998887754 5556677899999999998876
No 18
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.12 E-value=6.6e-09 Score=86.69 Aligned_cols=261 Identities=20% Similarity=0.274 Sum_probs=126.6
Q ss_pred HHHHHhhCCCCCEEEccCCCCCChhHHHHHHh---cCCCCCeEecCCCC--CcChHH------HHHHHhcCccCcEEecC
Q 015721 90 LAVIADGFKSLKLLNLQNCKGITDAGIASIGS---GLCSLQSLDLSYCR--KLTDKG------LSAVAEGCQDLRSLHLA 158 (402)
Q Consensus 90 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~---~~~~L~~L~l~~~~--~~~~~~------~~~~~~~~~~L~~L~l~ 158 (402)
+......+..++.+++++.+ +.......++. .-++|++.++++.- ...+.. +...+..+|+|+.++++
T Consensus 22 v~~~~~~~~s~~~l~lsgnt-~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLS 100 (382)
T KOG1909|consen 22 VEEELEPMDSLTKLDLSGNT-FGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLS 100 (382)
T ss_pred HHHHhcccCceEEEeccCCc-hhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecc
Confidence 34444556788888888844 55544444443 34567777665421 111111 12223457788888888
Q ss_pred CCccCC--hHHHHHHHHhCCCCcEEecCCCCCCchHHHHH------------HHhcCCCCCEEccCCCCCCCccc---HH
Q 015721 159 GCKSVT--DGTLQALSKNCRNLEELGLLGCTSISDSGVID------------LVNGCQNIKFLDLNKCSNIGDNG---IS 221 (402)
Q Consensus 159 ~~~~~~--~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~------------~~~~~~~L~~L~l~~~~~~~~~~---~~ 221 (402)
++..-. ...+..+.+++..|++|.+.+|. +...+-.. ....-+.|+++...++. ..+.+ +.
T Consensus 101 DNA~G~~g~~~l~~ll~s~~~L~eL~L~N~G-lg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNr-len~ga~~~A 178 (382)
T KOG1909|consen 101 DNAFGPKGIRGLEELLSSCTDLEELYLNNCG-LGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNR-LENGGATALA 178 (382)
T ss_pred ccccCccchHHHHHHHHhccCHHHHhhhcCC-CChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccc-cccccHHHHH
Confidence 753211 23455666678888888888753 33222111 12223666666666532 22222 23
Q ss_pred HHHhcCCCCCEEEecCCCCCChHH---HHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHh--cCCCcEEEccCCCCCCh
Q 015721 222 SVSKSCSSLKTLKLLDCYKVGDKS---ILSLAKFCKNLETLIIGGCRDISDESIKHLAASC--KSSLKNLRMDWCLNISD 296 (402)
Q Consensus 222 ~~~~~~~~L~~L~l~~~~~~~~~~---~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~--~~~L~~L~l~~~~~~~~ 296 (402)
..++..+.|+.+++..+. +...+ +...+..+|+|+.|++..+ .++..+-..++... +++|+.|+++.| .+.+
T Consensus 179 ~~~~~~~~leevr~~qN~-I~~eG~~al~eal~~~~~LevLdl~DN-tft~egs~~LakaL~s~~~L~El~l~dc-ll~~ 255 (382)
T KOG1909|consen 179 EAFQSHPTLEEVRLSQNG-IRPEGVTALAEALEHCPHLEVLDLRDN-TFTLEGSVALAKALSSWPHLRELNLGDC-LLEN 255 (382)
T ss_pred HHHHhccccceEEEeccc-ccCchhHHHHHHHHhCCcceeeecccc-hhhhHHHHHHHHHhcccchheeeccccc-cccc
Confidence 344455666766666532 22222 2223444666777766553 23333322332221 245666666665 3333
Q ss_pred HHH----HHHHhcCCCCcEEeccCCCCCChHHHHHHH---hccCCCcEEEEeCCCC--CHHHHHHHHHhC
Q 015721 297 SSL----SCILSQCRNLEALDIGCCEEVTDAAFQDLG---EVELSLKVLKVNCPKV--TVVGIGNVLEKC 357 (402)
Q Consensus 297 ~~l----~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~--~~~~l~~~~~~~ 357 (402)
.+. ..+-...|+|+.|.+.+|. ++..+...+. ...|.|+.|+++.|.+ .+.++..+...+
T Consensus 256 ~Ga~a~~~al~~~~p~L~vl~l~gNe-It~da~~~la~~~~ek~dL~kLnLngN~l~e~de~i~ei~~~~ 324 (382)
T KOG1909|consen 256 EGAIAFVDALKESAPSLEVLELAGNE-ITRDAALALAACMAEKPDLEKLNLNGNRLGEKDEGIDEIASKF 324 (382)
T ss_pred ccHHHHHHHHhccCCCCceeccCcch-hHHHHHHHHHHHHhcchhhHHhcCCcccccccchhHHHHHHhc
Confidence 222 2222345666666666533 3333222211 1133555555544444 334444444433
No 19
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.10 E-value=8.2e-09 Score=86.16 Aligned_cols=267 Identities=18% Similarity=0.240 Sum_probs=131.6
Q ss_pred hHHHHHHHhcCcceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCC--CCChhHH------HHHHhcCCCCC
Q 015721 56 HMLRKIAARFSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCK--GITDAGI------ASIGSGLCSLQ 127 (402)
Q Consensus 56 ~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~--~~~~~~~------~~~~~~~~~L~ 127 (402)
..+.........++.++++++. +..-....+......-++|+..++++.- ...+..+ ......+|+|+
T Consensus 20 ~~v~~~~~~~~s~~~l~lsgnt----~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~ 95 (382)
T KOG1909|consen 20 KDVEEELEPMDSLTKLDLSGNT----FGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQ 95 (382)
T ss_pred hhHHHHhcccCceEEEeccCCc----hhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCcee
Confidence 3444455556667777777653 1111122223333334556666665421 1111111 11122456777
Q ss_pred eEecCCCCCcChH---HHHHHHhcCccCcEEecCCCccCChHHHHH------------HHHhCCCCcEEecCCCCCCch-
Q 015721 128 SLDLSYCRKLTDK---GLSAVAEGCQDLRSLHLAGCKSVTDGTLQA------------LSKNCRNLEELGLLGCTSISD- 191 (402)
Q Consensus 128 ~L~l~~~~~~~~~---~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~------------~~~~~~~L~~L~l~~~~~~~~- 191 (402)
+|+++.+- +... ++..++..+..|++|.+.+|.. ....-.. ....-+.|+.+.... +.+.+
T Consensus 96 ~ldLSDNA-~G~~g~~~l~~ll~s~~~L~eL~L~N~Gl-g~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r-Nrlen~ 172 (382)
T KOG1909|consen 96 KLDLSDNA-FGPKGIRGLEELLSSCTDLEELYLNNCGL-GPEAGGRLGRALFELAVNKKAASKPKLRVFICGR-NRLENG 172 (382)
T ss_pred Eeeccccc-cCccchHHHHHHHHhccCHHHHhhhcCCC-ChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec-cccccc
Confidence 77777654 4433 3344556677777777777642 2111111 112345677776665 33322
Q ss_pred --HHHHHHHhcCCCCCEEccCCCCCCCcccH---HHHHhcCCCCCEEEecCCCCCChH--HHHHHHHhCCCCcEEEecCC
Q 015721 192 --SGVIDLVNGCQNIKFLDLNKCSNIGDNGI---SSVSKSCSSLKTLKLLDCYKVGDK--SILSLAKFCKNLETLIIGGC 264 (402)
Q Consensus 192 --~~~~~~~~~~~~L~~L~l~~~~~~~~~~~---~~~~~~~~~L~~L~l~~~~~~~~~--~~~~~~~~~~~L~~L~l~~~ 264 (402)
..+...++..|.|+.+.+..+ .+...+. ..-+..+++|+.|++.++...... .+......+|+|+.|.++.|
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN-~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dc 251 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQN-GIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDC 251 (382)
T ss_pred cHHHHHHHHHhccccceEEEecc-cccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccc
Confidence 233445566677777777663 3333222 233446777777777765433221 12223334566777777776
Q ss_pred CCCChHHHHHHHH---HhcCCCcEEEccCCCCCChHHH---HHHHhcCCCCcEEeccCCCC-CChHHHHHHHhcc
Q 015721 265 RDISDESIKHLAA---SCKSSLKNLRMDWCLNISDSSL---SCILSQCRNLEALDIGCCEE-VTDAAFQDLGEVE 332 (402)
Q Consensus 265 ~~~~~~~~~~l~~---~~~~~L~~L~l~~~~~~~~~~l---~~~l~~~~~L~~L~l~~~~~-~~~~~~~~~~~~~ 332 (402)
. +...+...+.. ...|+|+.|.+.++ .++.+.. ...+...|.|+.|++.+|.. -.+.++..+...+
T Consensus 252 l-l~~~Ga~a~~~al~~~~p~L~vl~l~gN-eIt~da~~~la~~~~ek~dL~kLnLngN~l~e~de~i~ei~~~~ 324 (382)
T KOG1909|consen 252 L-LENEGAIAFVDALKESAPSLEVLELAGN-EITRDAALALAACMAEKPDLEKLNLNGNRLGEKDEGIDEIASKF 324 (382)
T ss_pred c-cccccHHHHHHHHhccCCCCceeccCcc-hhHHHHHHHHHHHHhcchhhHHhcCCcccccccchhHHHHHHhc
Confidence 3 33333222222 11467777777766 3443322 22234567777777777442 1444555555444
No 20
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=2.5e-11 Score=103.67 Aligned_cols=215 Identities=15% Similarity=0.153 Sum_probs=144.5
Q ss_pred HhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHh
Q 015721 173 KNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKF 252 (402)
Q Consensus 173 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 252 (402)
+++.+|+++.+.++ .+...+.......||+++.|+++.+-.-....+..++..+|+|+.|+++.+..... .-......
T Consensus 118 sn~kkL~~IsLdn~-~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~-~~s~~~~~ 195 (505)
T KOG3207|consen 118 SNLKKLREISLDNY-RVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNF-ISSNTTLL 195 (505)
T ss_pred hhHHhhhheeecCc-cccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCC-ccccchhh
Confidence 45778888888874 44443333567788999999999855555556777888899999999987532211 11112224
Q ss_pred CCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhcc
Q 015721 253 CKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVE 332 (402)
Q Consensus 253 ~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 332 (402)
++.|+.|.+++| +++...++.+...+ |+|+.|.+.++..+...... ...+..|+.|+++++..++.......+ .+
T Consensus 196 l~~lK~L~l~~C-Gls~k~V~~~~~~f-Psl~~L~L~~N~~~~~~~~~--~~i~~~L~~LdLs~N~li~~~~~~~~~-~l 270 (505)
T KOG3207|consen 196 LSHLKQLVLNSC-GLSWKDVQWILLTF-PSLEVLYLEANEIILIKATS--TKILQTLQELDLSNNNLIDFDQGYKVG-TL 270 (505)
T ss_pred hhhhheEEeccC-CCCHHHHHHHHHhC-CcHHHhhhhcccccceecch--hhhhhHHhhccccCCcccccccccccc-cc
Confidence 688999999998 57788888888887 99999999877433211111 234556899999987777665555444 34
Q ss_pred CCCcEEEEeCCCCCHHHHH-----HHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcceEeccccc
Q 015721 333 LSLKVLKVNCPKVTVVGIG-----NVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNFAGCL 395 (402)
Q Consensus 333 ~~L~~L~l~~~~~~~~~l~-----~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~~~~~ 395 (402)
|+|+.|.+..+.+.+.+.. +-...+|+|+.|++..++-..-..+..+. ..++++.+.+.+.+
T Consensus 271 ~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~-~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 271 PGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLR-TLENLKHLRITLNY 337 (505)
T ss_pred cchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhh-ccchhhhhhccccc
Confidence 4888888855666554332 22457899999999986653334454444 57777777765544
No 21
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.00 E-value=3.6e-11 Score=111.92 Aligned_cols=126 Identities=21% Similarity=0.366 Sum_probs=89.1
Q ss_pred CCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCC--CCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCC
Q 015721 230 LKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGC--RDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCR 307 (402)
Q Consensus 230 L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~--~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~ 307 (402)
|+.|.+.+ ..+++..++.+ .+.++|+.|+++++ ..+++..+..+ ..|++|.++++ .++ .++.-+..|+
T Consensus 361 Lq~Lylan-N~Ltd~c~p~l-~~~~hLKVLhLsyNrL~~fpas~~~kl-----e~LeeL~LSGN-kL~--~Lp~tva~~~ 430 (1081)
T KOG0618|consen 361 LQELYLAN-NHLTDSCFPVL-VNFKHLKVLHLSYNRLNSFPASKLRKL-----EELEELNLSGN-KLT--TLPDTVANLG 430 (1081)
T ss_pred HHHHHHhc-Ccccccchhhh-ccccceeeeeecccccccCCHHHHhch-----HHhHHHhcccc-hhh--hhhHHHHhhh
Confidence 45555555 34555554443 44789999999875 34556666666 78899999987 555 4556677888
Q ss_pred CCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCC
Q 015721 308 NLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPH 370 (402)
Q Consensus 308 ~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~ 370 (402)
.|++|...++. + ..++++.... .|+.++++||+++...+..... -|+|++|+++++++
T Consensus 431 ~L~tL~ahsN~-l--~~fPe~~~l~-qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 431 RLHTLRAHSNQ-L--LSFPELAQLP-QLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTR 488 (1081)
T ss_pred hhHHHhhcCCc-e--eechhhhhcC-cceEEecccchhhhhhhhhhCC-CcccceeeccCCcc
Confidence 99999887633 3 3455666555 8999999999998877765532 38999999999874
No 22
>PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B.
Probab=98.98 E-value=2.5e-10 Score=68.27 Aligned_cols=37 Identities=35% Similarity=0.670 Sum_probs=31.7
Q ss_pred ccCCHHHHHHHHccCCCcchhhHHHHhhHHHHHhhhhc
Q 015721 8 EVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTE 45 (402)
Q Consensus 8 ~~LP~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~~ 45 (402)
..||+||+.+||+||+ .+|+.++++|||+|+.++...
T Consensus 2 ~~LP~Eil~~If~~L~-~~dl~~~~~vcr~w~~~~~~~ 38 (47)
T PF12937_consen 2 SSLPDEILLEIFSYLD-PRDLLRLSLVCRRWRRIANDN 38 (47)
T ss_dssp CCS-HHHHHHHHTTS--HHHHHHHTTSSHHHHHHHTCC
T ss_pred hHhHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHCCh
Confidence 5699999999999999 599999999999999987554
No 23
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.84 E-value=3e-08 Score=94.13 Aligned_cols=108 Identities=20% Similarity=0.273 Sum_probs=55.6
Q ss_pred CCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCC
Q 015721 124 CSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQN 203 (402)
Q Consensus 124 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 203 (402)
.+|++|++++...+...-...+...+|+|++|.+.+.. .....+..++.++|+|..||+++ ..+++. ..++++++
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~-~~~~dF~~lc~sFpNL~sLDIS~-TnI~nl---~GIS~Lkn 196 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQ-FDNDDFSQLCASFPNLRSLDISG-TNISNL---SGISRLKN 196 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCce-ecchhHHHHhhccCccceeecCC-CCccCc---HHHhcccc
Confidence 35666666655544444444455556666666666532 22233555555566666666665 333331 33455566
Q ss_pred CCEEccCCCCCCCcccHHHHHhcCCCCCEEEecC
Q 015721 204 IKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLD 237 (402)
Q Consensus 204 L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 237 (402)
|+.|.+.+-.......+..++ .+++|+.|+++.
T Consensus 197 Lq~L~mrnLe~e~~~~l~~LF-~L~~L~vLDIS~ 229 (699)
T KOG3665|consen 197 LQVLSMRNLEFESYQDLIDLF-NLKKLRVLDISR 229 (699)
T ss_pred HHHHhccCCCCCchhhHHHHh-cccCCCeeeccc
Confidence 666655554333333344444 355566666554
No 24
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.83 E-value=2.7e-09 Score=87.10 Aligned_cols=196 Identities=16% Similarity=0.097 Sum_probs=94.6
Q ss_pred HHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHH
Q 015721 168 LQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSIL 247 (402)
Q Consensus 168 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 247 (402)
...+...+.+++++++.++.-.....+..++.++|.|+.|+++.+.-.++ +........+|+.|.+.+ ..+......
T Consensus 63 ~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~--I~~lp~p~~nl~~lVLNg-T~L~w~~~~ 139 (418)
T KOG2982|consen 63 VMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSD--IKSLPLPLKNLRVLVLNG-TGLSWTQST 139 (418)
T ss_pred HHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCc--cccCcccccceEEEEEcC-CCCChhhhh
Confidence 33334444555555555532223334445555555555555554332222 222212334555555554 334444444
Q ss_pred HHHHhCCCCcEEEecCCC----CCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChH
Q 015721 248 SLAKFCKNLETLIIGGCR----DISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDA 323 (402)
Q Consensus 248 ~~~~~~~~L~~L~l~~~~----~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~ 323 (402)
.....+|.++.|+++.++ .+.++..... .+.+++|...+|..........+.+.+|++..+.+..|+..+ .
T Consensus 140 s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~----s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~-~ 214 (418)
T KOG2982|consen 140 SSLDDLPKVTELHMSDNSLRQLNLDDNCIEDW----STEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKT-E 214 (418)
T ss_pred hhhhcchhhhhhhhccchhhhhcccccccccc----chhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccc-h
Confidence 444455555555554421 1111112211 234556655555444444455556667777777776654322 2
Q ss_pred HHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCC
Q 015721 324 AFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHV 371 (402)
Q Consensus 324 ~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~ 371 (402)
..+.-....|.+..|.++.+++.+.+-.+-+..+|.|..|.+.+.|-.
T Consensus 215 s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 215 SSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred hhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 222222333355566666666655444444556777777777766543
No 25
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.78 E-value=4.8e-08 Score=92.82 Aligned_cols=158 Identities=21% Similarity=0.207 Sum_probs=73.7
Q ss_pred CCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcC
Q 015721 202 QNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKS 281 (402)
Q Consensus 202 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~ 281 (402)
.+|++|++++.......-...+...+|+|++|.+.+.. .....+..+..++|+|.+|++++++--.-.++..+ +
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~-~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~GIS~L-----k 195 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQ-FDNDDFSQLCASFPNLRSLDISGTNISNLSGISRL-----K 195 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCce-ecchhHHHHhhccCccceeecCCCCccCcHHHhcc-----c
Confidence 45666666554433332233444455666666666532 22223445555566666666665432222233333 5
Q ss_pred CCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChH-HHHHH---HhccCCCcEEEEeCCCCCHHHHHHHHHhC
Q 015721 282 SLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDA-AFQDL---GEVELSLKVLKVNCPKVTVVGIGNVLEKC 357 (402)
Q Consensus 282 ~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~-~~~~~---~~~~~~L~~L~l~~~~~~~~~l~~~~~~~ 357 (402)
+|+.|.+.+....+...+.. +-++++|+.|+++.-...++. .+... ...+|+|+.|+.+.+.++...++.++..=
T Consensus 196 nLq~L~mrnLe~e~~~~l~~-LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH 274 (699)
T KOG3665|consen 196 NLQVLSMRNLEFESYQDLID-LFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSH 274 (699)
T ss_pred cHHHHhccCCCCCchhhHHH-HhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhC
Confidence 55555555443333333444 335666666666643322222 11111 11233555555555555555555555555
Q ss_pred CCCCEEecc
Q 015721 358 ASLEYIDVR 366 (402)
Q Consensus 358 ~~L~~L~l~ 366 (402)
|+|+.+.+.
T Consensus 275 ~~L~~i~~~ 283 (699)
T KOG3665|consen 275 PNLQQIAAL 283 (699)
T ss_pred ccHhhhhhh
Confidence 555554443
No 26
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.66 E-value=1.7e-09 Score=101.19 Aligned_cols=128 Identities=17% Similarity=0.263 Sum_probs=81.1
Q ss_pred CcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCC
Q 015721 256 LETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSL 335 (402)
Q Consensus 256 L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L 335 (402)
|+.|.+.++ .+++..+..+. ++..|+.|+++++ .+.. .-...+..++.|+.|+++|+ .++ .+..-...++.|
T Consensus 361 Lq~LylanN-~Ltd~c~p~l~--~~~hLKVLhLsyN-rL~~-fpas~~~kle~LeeL~LSGN-kL~--~Lp~tva~~~~L 432 (1081)
T KOG0618|consen 361 LQELYLANN-HLTDSCFPVLV--NFKHLKVLHLSYN-RLNS-FPASKLRKLEELEELNLSGN-KLT--TLPDTVANLGRL 432 (1081)
T ss_pred HHHHHHhcC-cccccchhhhc--cccceeeeeeccc-cccc-CCHHHHhchHHhHHHhcccc-hhh--hhhHHHHhhhhh
Confidence 444555442 45555555542 2367888888876 2221 11223567778888888884 342 223333334477
Q ss_pred cEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcceEecccccc
Q 015721 336 KVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNFAGCLF 396 (402)
Q Consensus 336 ~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~~~~~~ 396 (402)
++|..+.|.+... +.+ ..++.|+.++++ |+.++.-.+++.. +.|+|+.++++|+++
T Consensus 433 ~tL~ahsN~l~~f--Pe~-~~l~qL~~lDlS-~N~L~~~~l~~~~-p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 433 HTLRAHSNQLLSF--PEL-AQLPQLKVLDLS-CNNLSEVTLPEAL-PSPNLKYLDLSGNTR 488 (1081)
T ss_pred HHHhhcCCceeec--hhh-hhcCcceEEecc-cchhhhhhhhhhC-CCcccceeeccCCcc
Confidence 7777777777653 334 369999999996 4777777776666 569999999999985
No 27
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.63 E-value=4.2e-08 Score=93.72 Aligned_cols=83 Identities=19% Similarity=0.214 Sum_probs=48.4
Q ss_pred CCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCC
Q 015721 281 SSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASL 360 (402)
Q Consensus 281 ~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L 360 (402)
.+|+.|+++++ .++ .++. ..++|+.|+++++. ++. ++. .+.+|+.|++..|.++. ++.-+..+++|
T Consensus 382 ~~L~~LdLs~N-~Lt--~LP~---l~s~L~~LdLS~N~-Lss--IP~---l~~~L~~L~Ls~NqLt~--LP~sl~~L~~L 447 (788)
T PRK15387 382 SGLKELIVSGN-RLT--SLPV---LPSELKELMVSGNR-LTS--LPM---LPSGLLSLSVYRNQLTR--LPESLIHLSSE 447 (788)
T ss_pred cccceEEecCC-ccc--CCCC---cccCCCEEEccCCc-CCC--CCc---chhhhhhhhhccCcccc--cChHHhhccCC
Confidence 56777777765 333 1221 23567788887743 322 221 22367777776677764 34445578888
Q ss_pred CEEeccCCCCCCHhHHHh
Q 015721 361 EYIDVRSCPHVTQASCEE 378 (402)
Q Consensus 361 ~~L~l~~c~~~~~~~~~~ 378 (402)
+.|++++++ ++...+..
T Consensus 448 ~~LdLs~N~-Ls~~~~~~ 464 (788)
T PRK15387 448 TTVNLEGNP-LSERTLQA 464 (788)
T ss_pred CeEECCCCC-CCchHHHH
Confidence 888888865 45444443
No 28
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.61 E-value=2.5e-08 Score=95.21 Aligned_cols=256 Identities=18% Similarity=0.152 Sum_probs=131.9
Q ss_pred cceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHH
Q 015721 67 RLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVA 146 (402)
Q Consensus 67 ~l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 146 (402)
+-..|+++.+.... +. ..+ .++|+.|.+.++. ++.. + ...++|++|+++++. ++. ++.
T Consensus 202 ~~~~LdLs~~~Lts----LP-~~l------~~~L~~L~L~~N~-Lt~L--P---~lp~~Lk~LdLs~N~-Lts--LP~-- 259 (788)
T PRK15387 202 GNAVLNVGESGLTT----LP-DCL------PAHITTLVIPDNN-LTSL--P---ALPPELRTLEVSGNQ-LTS--LPV-- 259 (788)
T ss_pred CCcEEEcCCCCCCc----CC-cch------hcCCCEEEccCCc-CCCC--C---CCCCCCcEEEecCCc-cCc--ccC--
Confidence 35677877654322 11 111 1467888887633 4421 1 234778888887764 442 221
Q ss_pred hcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhc
Q 015721 147 EGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKS 226 (402)
Q Consensus 147 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 226 (402)
..++|+.|++.++. +. .++. ..++|+.|++.++ .++. ++. ..++|+.|+++++. +.. ++. .
T Consensus 260 -lp~sL~~L~Ls~N~-L~--~Lp~---lp~~L~~L~Ls~N-~Lt~--LP~---~p~~L~~LdLS~N~-L~~--Lp~---l 320 (788)
T PRK15387 260 -LPPGLLELSIFSNP-LT--HLPA---LPSGLCKLWIFGN-QLTS--LPV---LPPGLQELSVSDNQ-LAS--LPA---L 320 (788)
T ss_pred -cccccceeeccCCc-hh--hhhh---chhhcCEEECcCC-cccc--ccc---cccccceeECCCCc-ccc--CCC---C
Confidence 24677888887753 21 1222 2356777777763 3332 221 23678888887743 222 111 1
Q ss_pred CCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcC
Q 015721 227 CSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQC 306 (402)
Q Consensus 227 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~ 306 (402)
..+|+.|.+.++. +.. ++. ..++|+.|+++++ .++. +.. .+.+|+.|.++++ .++ .++. ..
T Consensus 321 p~~L~~L~Ls~N~-L~~--LP~---lp~~Lq~LdLS~N-~Ls~--LP~----lp~~L~~L~Ls~N-~L~--~LP~---l~ 381 (788)
T PRK15387 321 PSELCKLWAYNNQ-LTS--LPT---LPSGLQELSVSDN-QLAS--LPT----LPSELYKLWAYNN-RLT--SLPA---LP 381 (788)
T ss_pred cccccccccccCc-ccc--ccc---cccccceEecCCC-ccCC--CCC----CCcccceehhhcc-ccc--cCcc---cc
Confidence 2356667776642 221 111 1246777777664 2321 111 1356777777665 333 2222 23
Q ss_pred CCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCc
Q 015721 307 RNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQC 386 (402)
Q Consensus 307 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l 386 (402)
++|+.|+++++. ++. ++ ...++|+.|+++.|.++.. +.+ ..+|+.|+++++. ++ .++.-...++++
T Consensus 382 ~~L~~LdLs~N~-Lt~--LP---~l~s~L~~LdLS~N~LssI--P~l---~~~L~~L~Ls~Nq-Lt--~LP~sl~~L~~L 447 (788)
T PRK15387 382 SGLKELIVSGNR-LTS--LP---VLPSELKELMVSGNRLTSL--PML---PSGLLSLSVYRNQ-LT--RLPESLIHLSSE 447 (788)
T ss_pred cccceEEecCCc-ccC--CC---CcccCCCEEEccCCcCCCC--Ccc---hhhhhhhhhccCc-cc--ccChHHhhccCC
Confidence 467777777643 321 11 1234777777766666542 221 2356677776633 33 122222256777
Q ss_pred ceEecccccc
Q 015721 387 CKVNFAGCLF 396 (402)
Q Consensus 387 ~~l~~~~~~~ 396 (402)
..|++++++-
T Consensus 448 ~~LdLs~N~L 457 (788)
T PRK15387 448 TTVNLEGNPL 457 (788)
T ss_pred CeEECCCCCC
Confidence 7777777764
No 29
>smart00256 FBOX A Receptor for Ubiquitination Targets.
Probab=98.55 E-value=7.2e-08 Score=55.86 Aligned_cols=35 Identities=40% Similarity=0.590 Sum_probs=32.0
Q ss_pred CCHHHHHHHHccCCCcchhhHHHHhhHHHHHhhhhc
Q 015721 10 LRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTE 45 (402)
Q Consensus 10 LP~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~~ 45 (402)
||+|++..||.+|+ .+|+.+++.|||+|+.+....
T Consensus 1 lP~~ll~~I~~~l~-~~d~~~~~~vc~~~~~~~~~~ 35 (41)
T smart00256 1 LPDEILEEILSKLP-PKDLLRLRKVSRRWRSLIDSH 35 (41)
T ss_pred CCHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHhcCh
Confidence 79999999999999 499999999999999987554
No 30
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.52 E-value=1.9e-08 Score=82.40 Aligned_cols=130 Identities=17% Similarity=0.194 Sum_probs=89.4
Q ss_pred CCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcC
Q 015721 227 CSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQC 306 (402)
Q Consensus 227 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~ 306 (402)
...|++++++.+. +. .+.....-.|.++.|+++.+.......+..+ ++|++|+++++ .++ .+...-..+
T Consensus 283 Wq~LtelDLS~N~-I~--~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L-----~~L~~LDLS~N-~Ls--~~~Gwh~KL 351 (490)
T KOG1259|consen 283 WQELTELDLSGNL-IT--QIDESVKLAPKLRRLILSQNRIRTVQNLAEL-----PQLQLLDLSGN-LLA--ECVGWHLKL 351 (490)
T ss_pred Hhhhhhccccccc-hh--hhhhhhhhccceeEEeccccceeeehhhhhc-----ccceEeecccc-hhH--hhhhhHhhh
Confidence 3468889998742 32 2333444579999999988655555556666 89999999987 333 222233456
Q ss_pred CCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCC
Q 015721 307 RNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHV 371 (402)
Q Consensus 307 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~ 371 (402)
-|.++|.++++. + +.+..+.+.. +|..|++..|++....-..-+.++|.|+.+.+.++|--
T Consensus 352 GNIKtL~La~N~-i--E~LSGL~KLY-SLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 352 GNIKTLKLAQNK-I--ETLSGLRKLY-SLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred cCEeeeehhhhh-H--hhhhhhHhhh-hheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 789999999743 3 3334444444 89999998888877655566779999999999987743
No 31
>PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ]. This relatively conserved structural motif is present in numerous proteins and serves as a link between a target protein and a ubiquitin-conjugating enzyme. The SCF complex (e.g., Skp1-Cullin-F-box) plays a similar role as an E3 ligase in the ubiquitin protein degradation pathway [, ]. Different F-box proteins as a part of SCF complex recruit particular substrates for ubiquitination through specific protein-protein interaction domains. Many mammalian F-box domains contain leucine-rich or WD-40 repeats (IPR001680 from INTERPRO). However, several F-box proteins either have other previously described domains such as Sec7 domain found in FBS protein or do not contain defined protein-protein interaction domains or motifs.; GO: 0005515 protein binding; PDB: 2E32_A 2E31_A 3V7D_B 1NEX_B 3MKS_D 3L2O_B.
Probab=98.48 E-value=3.6e-08 Score=59.32 Aligned_cols=38 Identities=42% Similarity=0.558 Sum_probs=30.9
Q ss_pred cccCCHHHHHHHHccCCCcchhhHHHHhhHHHHHhhhhc
Q 015721 7 NEVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTE 45 (402)
Q Consensus 7 ~~~LP~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~~ 45 (402)
+..||+|++.+||++|+ ..++.++++|||+|+.+....
T Consensus 3 ~~~LP~~il~~Il~~l~-~~~~~~l~~vsk~~~~~~~~~ 40 (48)
T PF00646_consen 3 LSDLPDEILQEILSYLD-PKDLLRLSLVSKRWRSLVDSP 40 (48)
T ss_dssp HHHS-HHHHHHHHHTS--HHHHHHHCTT-HHHHHHHTTH
T ss_pred HHHCCHHHHHHHHHHCc-HHHHHHHHHHhhHHHHHHcCC
Confidence 35699999999999999 599999999999999986554
No 32
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.39 E-value=3.9e-07 Score=74.77 Aligned_cols=209 Identities=22% Similarity=0.213 Sum_probs=128.3
Q ss_pred CCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCc
Q 015721 100 LKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLE 179 (402)
Q Consensus 100 L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~ 179 (402)
++-+.+.+|.--+.-....+...+.+++++++..+..-....+..+++++|.|+.|+++.++...+ +.....-..+|+
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~--I~~lp~p~~nl~ 124 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSD--IKSLPLPLKNLR 124 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCc--cccCcccccceE
Confidence 444555566533344566677778899999998876334456777889999999999987643222 222222256899
Q ss_pred EEecCCCCCCchHHHHHHHhcCCCCCEEccCCCC----CCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCC
Q 015721 180 ELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCS----NIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKN 255 (402)
Q Consensus 180 ~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~----~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 255 (402)
.|-+.+ +.+........+..+|.++.|.++.++ .+.+..... .-+.+++++...|..........+...+|+
T Consensus 125 ~lVLNg-T~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~---~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpn 200 (418)
T KOG2982|consen 125 VLVLNG-TGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIED---WSTEVLTLHQLPCLEQLWLNKNKLSRIFPN 200 (418)
T ss_pred EEEEcC-CCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccc---cchhhhhhhcCCcHHHHHHHHHhHHhhccc
Confidence 998887 677777777788888999998887642 122222222 124677777777765555555566666888
Q ss_pred CcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCC-hHHHHHHHhcCCCCcEEeccCCC
Q 015721 256 LETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNIS-DSSLSCILSQCRNLEALDIGCCE 318 (402)
Q Consensus 256 L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~-~~~l~~~l~~~~~L~~L~l~~~~ 318 (402)
+.++.+..|+--+ ..-..-... ++.+..|.++.. ++. ..++.. +..+|.|..|.+.+.+
T Consensus 201 v~sv~v~e~PlK~-~s~ek~se~-~p~~~~LnL~~~-~idswasvD~-Ln~f~~l~dlRv~~~P 260 (418)
T KOG2982|consen 201 VNSVFVCEGPLKT-ESSEKGSEP-FPSLSCLNLGAN-NIDSWASVDA-LNGFPQLVDLRVSENP 260 (418)
T ss_pred chheeeecCcccc-hhhcccCCC-CCcchhhhhccc-ccccHHHHHH-HcCCchhheeeccCCc
Confidence 8888887764221 111111111 145555666554 332 233333 6677778877777644
No 33
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.38 E-value=6.7e-08 Score=82.18 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=70.8
Q ss_pred CCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCC
Q 015721 281 SSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASL 360 (402)
Q Consensus 281 ~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L 360 (402)
++|++|+++++ .++.- -...+.....++.|.+..+ .+.... ........+|+.|+++.|+++......+ +...+|
T Consensus 274 ~~L~~lnlsnN-~i~~i-~~~aFe~~a~l~eL~L~~N-~l~~v~-~~~f~~ls~L~tL~L~~N~it~~~~~aF-~~~~~l 348 (498)
T KOG4237|consen 274 PNLRKLNLSNN-KITRI-EDGAFEGAAELQELYLTRN-KLEFVS-SGMFQGLSGLKTLSLYDNQITTVAPGAF-QTLFSL 348 (498)
T ss_pred ccceEeccCCC-ccchh-hhhhhcchhhhhhhhcCcc-hHHHHH-HHhhhccccceeeeecCCeeEEEecccc-ccccee
Confidence 88889998886 55532 2234667778888888763 332221 2223334489999998899887655443 578899
Q ss_pred CEEeccCCCCCCHhHHHhhccCCCCcc
Q 015721 361 EYIDVRSCPHVTQASCEEAGLQFPQCC 387 (402)
Q Consensus 361 ~~L~l~~c~~~~~~~~~~~~~~~p~l~ 387 (402)
.+|++-.+|...+-.+.|++..+.+-.
T Consensus 349 ~~l~l~~Np~~CnC~l~wl~~Wlr~~~ 375 (498)
T KOG4237|consen 349 STLNLLSNPFNCNCRLAWLGEWLRKKS 375 (498)
T ss_pred eeeehccCcccCccchHHHHHHHhhCC
Confidence 999999999888888888886665544
No 34
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.35 E-value=3.6e-06 Score=81.12 Aligned_cols=255 Identities=17% Similarity=0.192 Sum_probs=143.3
Q ss_pred CcceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHH
Q 015721 66 SRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAV 145 (402)
Q Consensus 66 ~~l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 145 (402)
.+...|++++......... + .++|+.|+++++. ++.. +.. .+++|++|+++++. +.. ++..
T Consensus 178 ~~~~~L~L~~~~LtsLP~~-----I------p~~L~~L~Ls~N~-LtsL--P~~--l~~nL~~L~Ls~N~-Lts--LP~~ 238 (754)
T PRK15370 178 NNKTELRLKILGLTTIPAC-----I------PEQITTLILDNNE-LKSL--PEN--LQGNIKTLYANSNQ-LTS--IPAT 238 (754)
T ss_pred cCceEEEeCCCCcCcCCcc-----c------ccCCcEEEecCCC-CCcC--Chh--hccCCCEEECCCCc-ccc--CChh
Confidence 3467888876543221111 1 2478899998753 5532 221 13689999998865 542 2221
Q ss_pred HhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHh
Q 015721 146 AEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSK 225 (402)
Q Consensus 146 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 225 (402)
. .++|+.|+++++. +.. ++... ..+|+.|++++ +.+.. ++..+ .++|+.|+++++. +.. ++...
T Consensus 239 l--~~~L~~L~Ls~N~-L~~--LP~~l--~s~L~~L~Ls~-N~L~~--LP~~l--~~sL~~L~Ls~N~-Lt~--LP~~l- 302 (754)
T PRK15370 239 L--PDTIQEMELSINR-ITE--LPERL--PSALQSLDLFH-NKISC--LPENL--PEELRYLSVYDNS-IRT--LPAHL- 302 (754)
T ss_pred h--hccccEEECcCCc-cCc--CChhH--hCCCCEEECcC-CccCc--ccccc--CCCCcEEECCCCc-ccc--Ccccc-
Confidence 1 3478999998874 322 22211 35799999986 44442 22212 2579999998853 322 11111
Q ss_pred cCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhc
Q 015721 226 SCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQ 305 (402)
Q Consensus 226 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~ 305 (402)
.++|+.|+++++. +.. ++.. ..++|+.|.++++. ++. +....+++|+.|+++++ .++ .++..+
T Consensus 303 -p~sL~~L~Ls~N~-Lt~--LP~~--l~~sL~~L~Ls~N~-Lt~-----LP~~l~~sL~~L~Ls~N-~L~--~LP~~l-- 365 (754)
T PRK15370 303 -PSGITHLNVQSNS-LTA--LPET--LPPGLKTLEAGENA-LTS-----LPASLPPELQVLDVSKN-QIT--VLPETL-- 365 (754)
T ss_pred -hhhHHHHHhcCCc-ccc--CCcc--ccccceeccccCCc-ccc-----CChhhcCcccEEECCCC-CCC--cCChhh--
Confidence 1357777777643 221 1111 13678888887753 221 22222478999999887 444 222212
Q ss_pred CCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHH--HHHHHHHhCCCCCEEeccCCCCCCHhHHHh
Q 015721 306 CRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVV--GIGNVLEKCASLEYIDVRSCPHVTQASCEE 378 (402)
Q Consensus 306 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~ 378 (402)
.++|+.|++++|. ++. ....+. .+|+.|+++.|+++.. .+..+...++++..|++.++| ++...++.
T Consensus 366 p~~L~~LdLs~N~-Lt~-LP~~l~---~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Np-ls~~tl~~ 434 (754)
T PRK15370 366 PPTITTLDVSRNA-LTN-LPENLP---AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNP-FSERTIQN 434 (754)
T ss_pred cCCcCEEECCCCc-CCC-CCHhHH---HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCC-ccHHHHHH
Confidence 3678999998864 332 111222 2678888866776642 344455566888889888865 44444443
No 35
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.32 E-value=5.1e-07 Score=70.33 Aligned_cols=37 Identities=22% Similarity=0.050 Sum_probs=12.4
Q ss_pred cCCCCCEEEecCCCCCChHHH-HHHHHhCCCCcEEEec
Q 015721 226 SCSSLKTLKLLDCYKVGDKSI-LSLAKFCKNLETLIIG 262 (402)
Q Consensus 226 ~~~~L~~L~l~~~~~~~~~~~-~~~~~~~~~L~~L~l~ 262 (402)
.+++|+.|++.+++....... ..+...+|+|+.|+-.
T Consensus 111 ~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 111 SLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp G-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred cCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 355555555555432211111 1233345666666543
No 36
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.31 E-value=9.2e-08 Score=81.36 Aligned_cols=247 Identities=22% Similarity=0.210 Sum_probs=122.2
Q ss_pred ceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHh
Q 015721 68 LVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAE 147 (402)
Q Consensus 68 l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 147 (402)
..++++..+.. ..+.+..+ +.+++||+|++++. .+......++ +.+++|.+|.+.++.++.+- ....++
T Consensus 69 tveirLdqN~I----~~iP~~aF----~~l~~LRrLdLS~N-~Is~I~p~AF-~GL~~l~~Lvlyg~NkI~~l-~k~~F~ 137 (498)
T KOG4237|consen 69 TVEIRLDQNQI----SSIPPGAF----KTLHRLRRLDLSKN-NISFIAPDAF-KGLASLLSLVLYGNNKITDL-PKGAFG 137 (498)
T ss_pred ceEEEeccCCc----ccCChhhc----cchhhhceeccccc-chhhcChHhh-hhhHhhhHHHhhcCCchhhh-hhhHhh
Confidence 45666665542 23333222 45778888888873 3665555555 45667777666664445542 223445
Q ss_pred cCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHH-HHHhcCCCCCEEccCCCCCCCcccHH-----
Q 015721 148 GCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVI-DLVNGCQNIKFLDLNKCSNIGDNGIS----- 221 (402)
Q Consensus 148 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~----- 221 (402)
++..|+.|.+..+. +. -.....+..++++..|.+.++ .+.. +. ..+..+.+++.+.+.....+.+-.++
T Consensus 138 gL~slqrLllNan~-i~-Cir~~al~dL~~l~lLslyDn-~~q~--i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~ 212 (498)
T KOG4237|consen 138 GLSSLQRLLLNANH-IN-CIRQDALRDLPSLSLLSLYDN-KIQS--ICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADD 212 (498)
T ss_pred hHHHHHHHhcChhh-hc-chhHHHHHHhhhcchhcccch-hhhh--hccccccchhccchHhhhcCccccccccchhhhH
Confidence 56666666665431 22 123333444666776766652 1111 11 12233344444444332211100000
Q ss_pred ----------------HHH-----------hcCCCCCEE--EecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCC---h
Q 015721 222 ----------------SVS-----------KSCSSLKTL--KLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDIS---D 269 (402)
Q Consensus 222 ----------------~~~-----------~~~~~L~~L--~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~---~ 269 (402)
... .....++.+ .+.+...........-++.+|+|+.|++++. .++ +
T Consensus 213 ~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN-~i~~i~~ 291 (498)
T KOG4237|consen 213 LAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNN-KITRIED 291 (498)
T ss_pred HhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCC-ccchhhh
Confidence 000 000011111 1111111111222334566899999999774 343 3
Q ss_pred HHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEE
Q 015721 270 ESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKV 340 (402)
Q Consensus 270 ~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l 340 (402)
..+... ..+++|.+..+ ++.. .-...+..+..|+.|++++ +.++-.....+.... +|.+|.+
T Consensus 292 ~aFe~~-----a~l~eL~L~~N-~l~~-v~~~~f~~ls~L~tL~L~~-N~it~~~~~aF~~~~-~l~~l~l 353 (498)
T KOG4237|consen 292 GAFEGA-----AELQELYLTRN-KLEF-VSSGMFQGLSGLKTLSLYD-NQITTVAPGAFQTLF-SLSTLNL 353 (498)
T ss_pred hhhcch-----hhhhhhhcCcc-hHHH-HHHHhhhccccceeeeecC-CeeEEEecccccccc-eeeeeeh
Confidence 333333 67888888765 3331 1234578889999999998 445554444444444 8888888
No 37
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.28 E-value=3.1e-07 Score=89.76 Aligned_cols=84 Identities=24% Similarity=0.239 Sum_probs=36.9
Q ss_pred hcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhc
Q 015721 121 SGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNG 200 (402)
Q Consensus 121 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 200 (402)
..+|.|+.|++++|.... .+|...+.+-+|+.|++++.. +. .++....++..|.+|++........ ++.....
T Consensus 568 ~~m~~LrVLDLs~~~~l~--~LP~~I~~Li~LryL~L~~t~-I~--~LP~~l~~Lk~L~~Lnl~~~~~l~~--~~~i~~~ 640 (889)
T KOG4658|consen 568 RSLPLLRVLDLSGNSSLS--KLPSSIGELVHLRYLDLSDTG-IS--HLPSGLGNLKKLIYLNLEVTGRLES--IPGILLE 640 (889)
T ss_pred hhCcceEEEECCCCCccC--cCChHHhhhhhhhcccccCCC-cc--ccchHHHHHHhhheecccccccccc--ccchhhh
Confidence 345555555555443222 244444445555555555532 21 2333333455555555544222111 1223333
Q ss_pred CCCCCEEccCC
Q 015721 201 CQNIKFLDLNK 211 (402)
Q Consensus 201 ~~~L~~L~l~~ 211 (402)
+++|++|.+..
T Consensus 641 L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 641 LQSLRVLRLPR 651 (889)
T ss_pred cccccEEEeec
Confidence 45555555544
No 38
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.25 E-value=1.1e-06 Score=67.97 Aligned_cols=104 Identities=23% Similarity=0.403 Sum_probs=82.2
Q ss_pred CcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEE-eCCCCCHHHHHHHHHhCCCCC
Q 015721 283 LKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKV-NCPKVTVVGIGNVLEKCASLE 361 (402)
Q Consensus 283 L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l-~~~~~~~~~l~~~~~~~~~L~ 361 (402)
++.++-+++ .+..+++.. ++.++.++.|.+.+|..++|.++..+....++|+.|+| .|.+||+.++..+. .+++|+
T Consensus 103 IeaVDAsds-~I~~eGle~-L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~-~lknLr 179 (221)
T KOG3864|consen 103 IEAVDASDS-SIMYEGLEH-LRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLL-KLKNLR 179 (221)
T ss_pred EEEEecCCc-hHHHHHHHH-HhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHH-HhhhhH
Confidence 455655554 455566666 77899999999999999999999999998889999999 79999999997775 699999
Q ss_pred EEeccCCCCCCHh--HHHhhccCCCCcceE
Q 015721 362 YIDVRSCPHVTQA--SCEEAGLQFPQCCKV 389 (402)
Q Consensus 362 ~L~l~~c~~~~~~--~~~~~~~~~p~l~~l 389 (402)
.|.+.+-+.+... ....+...+|++..+
T Consensus 180 ~L~l~~l~~v~~~e~~~~~Le~aLP~c~I~ 209 (221)
T KOG3864|consen 180 RLHLYDLPYVANLELVQRQLEEALPKCDIV 209 (221)
T ss_pred HHHhcCchhhhchHHHHHHHHHhCccccee
Confidence 9999988777542 234456678886643
No 39
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.23 E-value=6.7e-07 Score=87.45 Aligned_cols=236 Identities=21% Similarity=0.182 Sum_probs=119.7
Q ss_pred cCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcC
Q 015721 122 GLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGC 201 (402)
Q Consensus 122 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 201 (402)
.+++|++|-+..+...-......++..+|.|+.|++++|.... .++...+.+-+|++|++++ +.+.. ++..+..+
T Consensus 543 ~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~--~LP~~I~~Li~LryL~L~~-t~I~~--LP~~l~~L 617 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLS--KLPSSIGELVHLRYLDLSD-TGISH--LPSGLGNL 617 (889)
T ss_pred CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccC--cCChHHhhhhhhhcccccC-CCccc--cchHHHHH
Confidence 4567777777654321111223345668888888888754332 2555555577888888877 44543 66667777
Q ss_pred CCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcC
Q 015721 202 QNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKS 281 (402)
Q Consensus 202 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~ 281 (402)
..|.+|++........ ++.+...+++|++|.+.......+.....-...+.+|+.+..+.........+..+. ....
T Consensus 618 k~L~~Lnl~~~~~l~~--~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~~-~L~~ 694 (889)
T KOG4658|consen 618 KKLIYLNLEVTGRLES--IPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSVLLLEDLLGMT-RLRS 694 (889)
T ss_pred Hhhheecccccccccc--ccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchhHhHhhhhhhH-HHHH
Confidence 7888888876443332 244444577888888765331111111122233455555555332210001111110 0001
Q ss_pred CCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHH----HHh-ccCCCcEEEE-eCCCCCHHHHHHHHH
Q 015721 282 SLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQD----LGE-VELSLKVLKV-NCPKVTVVGIGNVLE 355 (402)
Q Consensus 282 ~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~----~~~-~~~~L~~L~l-~~~~~~~~~l~~~~~ 355 (402)
..+.+.+.++... .....+..+++|+.|.+.+|....... .. ... .++++..+.+ +|......... .
T Consensus 695 ~~~~l~~~~~~~~---~~~~~~~~l~~L~~L~i~~~~~~e~~~-~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~---~ 767 (889)
T KOG4658|consen 695 LLQSLSIEGCSKR---TLISSLGSLGNLEELSILDCGISEIVI-EWEESLIVLLCFPNLSKVSILNCHMLRDLTWL---L 767 (889)
T ss_pred HhHhhhhcccccc---eeecccccccCcceEEEEcCCCchhhc-ccccccchhhhHHHHHHHHhhccccccccchh---h
Confidence 1122222222111 222335677888888888766432111 00 000 1224444444 55555543332 2
Q ss_pred hCCCCCEEeccCCCCCC
Q 015721 356 KCASLEYIDVRSCPHVT 372 (402)
Q Consensus 356 ~~~~L~~L~l~~c~~~~ 372 (402)
..|+|+.|.+..|+.+.
T Consensus 768 f~~~L~~l~l~~~~~~e 784 (889)
T KOG4658|consen 768 FAPHLTSLSLVSCRLLE 784 (889)
T ss_pred ccCcccEEEEecccccc
Confidence 46888888888887764
No 40
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=98.21 E-value=5.7e-07 Score=76.90 Aligned_cols=110 Identities=16% Similarity=0.194 Sum_probs=58.0
Q ss_pred HHHhCCCCcEEEecCCCCCC--hHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHH
Q 015721 249 LAKFCKNLETLIIGGCRDIS--DESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQ 326 (402)
Q Consensus 249 ~~~~~~~L~~L~l~~~~~~~--~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~ 326 (402)
....+++|..|++++.. +. +..+..+ ..|+.|+++.+. .. .++.++.....++.+-.++ .++......
T Consensus 430 ~l~~l~kLt~L~L~NN~-Ln~LP~e~~~l-----v~Lq~LnlS~Nr-Fr--~lP~~~y~lq~lEtllas~-nqi~~vd~~ 499 (565)
T KOG0472|consen 430 ELSQLQKLTFLDLSNNL-LNDLPEEMGSL-----VRLQTLNLSFNR-FR--MLPECLYELQTLETLLASN-NQIGSVDPS 499 (565)
T ss_pred HHHhhhcceeeecccch-hhhcchhhhhh-----hhhheecccccc-cc--cchHHHhhHHHHHHHHhcc-ccccccChH
Confidence 33446677777776631 11 1122222 457777777652 22 2344343434444444443 333322222
Q ss_pred HHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCC
Q 015721 327 DLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHV 371 (402)
Q Consensus 327 ~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~ 371 (402)
.+.. ..+|..|++..|.+.. ++..+.+|.+|++|+++++|.-
T Consensus 500 ~l~n-m~nL~tLDL~nNdlq~--IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 500 GLKN-MRNLTTLDLQNNDLQQ--IPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred Hhhh-hhhcceeccCCCchhh--CChhhccccceeEEEecCCccC
Confidence 2222 2277788886666654 4556778888888888887654
No 41
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.13 E-value=1.6e-05 Score=76.82 Aligned_cols=235 Identities=17% Similarity=0.161 Sum_probs=136.8
Q ss_pred CcceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHH
Q 015721 66 SRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAV 145 (402)
Q Consensus 66 ~~l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 145 (402)
++++.|+++++.... +.. . .+++|+.|+++++. +... +.. ..++|+.|+++++. +.. ++..
T Consensus 199 ~~L~~L~Ls~N~Lts----LP~-~------l~~nL~~L~Ls~N~-LtsL--P~~--l~~~L~~L~Ls~N~-L~~--LP~~ 259 (754)
T PRK15370 199 EQITTLILDNNELKS----LPE-N------LQGNIKTLYANSNQ-LTSI--PAT--LPDTIQEMELSINR-ITE--LPER 259 (754)
T ss_pred cCCcEEEecCCCCCc----CCh-h------hccCCCEEECCCCc-cccC--Chh--hhccccEEECcCCc-cCc--CChh
Confidence 468899999875322 211 1 13689999999854 4432 221 12579999999876 442 2222
Q ss_pred HhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHh
Q 015721 146 AEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSK 225 (402)
Q Consensus 146 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 225 (402)
. ..+|+.|+++++. +.. ++.. ..++|+.|+++++ .++. ++..+ .++|+.|+++++.. .. ++..
T Consensus 260 l--~s~L~~L~Ls~N~-L~~--LP~~--l~~sL~~L~Ls~N-~Lt~--LP~~l--p~sL~~L~Ls~N~L-t~--LP~~-- 322 (754)
T PRK15370 260 L--PSALQSLDLFHNK-ISC--LPEN--LPEELRYLSVYDN-SIRT--LPAHL--PSGITHLNVQSNSL-TA--LPET-- 322 (754)
T ss_pred H--hCCCCEEECcCCc-cCc--cccc--cCCCCcEEECCCC-cccc--Ccccc--hhhHHHHHhcCCcc-cc--CCcc--
Confidence 2 2579999998753 332 2221 1358999999985 3432 22111 14688888887433 22 2211
Q ss_pred cCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhc
Q 015721 226 SCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQ 305 (402)
Q Consensus 226 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~ 305 (402)
..++|+.|.++++. +.. ++... .++|+.|+++++. ++. +....+++|+.|+++++ .++ .++.-+.
T Consensus 323 l~~sL~~L~Ls~N~-Lt~--LP~~l--~~sL~~L~Ls~N~-L~~-----LP~~lp~~L~~LdLs~N-~Lt--~LP~~l~- 387 (754)
T PRK15370 323 LPPGLKTLEAGENA-LTS--LPASL--PPELQVLDVSKNQ-ITV-----LPETLPPTITTLDVSRN-ALT--NLPENLP- 387 (754)
T ss_pred ccccceeccccCCc-ccc--CChhh--cCcccEEECCCCC-CCc-----CChhhcCCcCEEECCCC-cCC--CCCHhHH-
Confidence 13678999888764 221 22211 3689999998863 331 11222478999999887 443 2222121
Q ss_pred CCCCcEEeccCCCCCCh--HHHHHHHhccCCCcEEEEeCCCCCHHHHHHH
Q 015721 306 CRNLEALDIGCCEEVTD--AAFQDLGEVELSLKVLKVNCPKVTVVGIGNV 353 (402)
Q Consensus 306 ~~~L~~L~l~~~~~~~~--~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~ 353 (402)
++|+.|+++++. +.. ..+..+....+++..|.++.|.++...+..+
T Consensus 388 -~sL~~LdLs~N~-L~~LP~sl~~~~~~~~~l~~L~L~~Npls~~tl~~L 435 (754)
T PRK15370 388 -AALQIMQASRNN-LVRLPESLPHFRGEGPQPTRIIVEYNPFSERTIQNM 435 (754)
T ss_pred -HHHHHHhhccCC-cccCchhHHHHhhcCCCccEEEeeCCCccHHHHHHH
Confidence 258888888754 321 1234444445688899998888876555433
No 42
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=98.13 E-value=2.3e-07 Score=79.28 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=30.2
Q ss_pred HHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcceEecccccc
Q 015721 354 LEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNFAGCLF 396 (402)
Q Consensus 354 ~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~~~~~~ 396 (402)
+..+.+|.+|++.++. + +.++..-..+.+++++.++|+|.
T Consensus 501 l~nm~nL~tLDL~nNd-l--q~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 501 LKNMRNLTTLDLQNND-L--QQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred hhhhhhcceeccCCCc-h--hhCChhhccccceeEEEecCCcc
Confidence 4578899999998743 2 44444444899999999999985
No 43
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.12 E-value=1.7e-06 Score=67.39 Aligned_cols=134 Identities=16% Similarity=0.156 Sum_probs=52.1
Q ss_pred CCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhcc
Q 015721 253 CKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVE 332 (402)
Q Consensus 253 ~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 332 (402)
+.+++.|++.++.-.. +..+... ..+|+.|+++++ .++ .+.. +..+++|+.|++++ +.+++.. ..+...+
T Consensus 18 ~~~~~~L~L~~n~I~~---Ie~L~~~-l~~L~~L~Ls~N-~I~--~l~~-l~~L~~L~~L~L~~-N~I~~i~-~~l~~~l 87 (175)
T PF14580_consen 18 PVKLRELNLRGNQIST---IENLGAT-LDKLEVLDLSNN-QIT--KLEG-LPGLPRLKTLDLSN-NRISSIS-EGLDKNL 87 (175)
T ss_dssp ---------------------S--TT--TT--EEE-TTS---S----TT-----TT--EEE--S-S---S-C-HHHHHH-
T ss_pred cccccccccccccccc---ccchhhh-hcCCCEEECCCC-CCc--cccC-ccChhhhhhcccCC-CCCCccc-cchHHhC
Confidence 4578999998864222 2233212 278999999988 454 2333 56789999999998 4454321 2343456
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCH-hHHHhhccCCCCcceEecccccc
Q 015721 333 LSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQ-ASCEEAGLQFPQCCKVNFAGCLF 396 (402)
Q Consensus 333 ~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~-~~~~~~~~~~p~l~~l~~~~~~~ 396 (402)
|+|++|+++.|.+....--..+..+|+|+.|++.++|--.. .+=..+...+|+++.++-.....
T Consensus 88 p~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~~V~~ 152 (175)
T PF14580_consen 88 PNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQDVTE 152 (175)
T ss_dssp TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTEETTS
T ss_pred CcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCEEccH
Confidence 79999999778776533223346899999999999875533 33444566799999888765443
No 44
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=97.94 E-value=1.9e-06 Score=70.89 Aligned_cols=128 Identities=22% Similarity=0.211 Sum_probs=86.1
Q ss_pred CCCCcEEEecCCCCC-ChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhc
Q 015721 253 CKNLETLIIGGCRDI-SDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEV 331 (402)
Q Consensus 253 ~~~L~~L~l~~~~~~-~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 331 (402)
.+.|+.++++++..- .++++.-+ |.++.|+++++. +. .+.. +..+++|+.|+++++. + ..+..+-..
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~-----Pkir~L~lS~N~-i~--~v~n-La~L~~L~~LDLS~N~-L--s~~~Gwh~K 350 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLA-----PKLRRLILSQNR-IR--TVQN-LAELPQLQLLDLSGNL-L--AECVGWHLK 350 (490)
T ss_pred Hhhhhhccccccchhhhhhhhhhc-----cceeEEeccccc-ee--eehh-hhhcccceEeecccch-h--HhhhhhHhh
Confidence 456888999874311 13333333 899999999873 33 2233 6788999999999844 3 233444444
Q ss_pred cCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcceEecccccc
Q 015721 332 ELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCCKVNFAGCLF 396 (402)
Q Consensus 332 ~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~~l~~~~~~~ 396 (402)
..|+++|.+..|.+.+.+ .+..+=+|..|++.++.--.-+.+..++ .+|=+..+.+.++|.
T Consensus 351 LGNIKtL~La~N~iE~LS---GL~KLYSLvnLDl~~N~Ie~ldeV~~IG-~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 351 LGNIKTLKLAQNKIETLS---GLRKLYSLVNLDLSSNQIEELDEVNHIG-NLPCLETLRLTGNPL 411 (490)
T ss_pred hcCEeeeehhhhhHhhhh---hhHhhhhheeccccccchhhHHHhcccc-cccHHHHHhhcCCCc
Confidence 459999999777776532 2345668999999985543445566666 788888888888874
No 45
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.93 E-value=0.0013 Score=53.95 Aligned_cols=90 Identities=20% Similarity=0.255 Sum_probs=47.2
Q ss_pred hcCCCCCeEecCCCCCcChHHHHHHHhcCc---cCcEEecCCCc--cCChH-------HHHHHHHhCCCCcEEecCCCCC
Q 015721 121 SGLCSLQSLDLSYCRKLTDKGLSAVAEGCQ---DLRSLHLAGCK--SVTDG-------TLQALSKNCRNLEELGLLGCTS 188 (402)
Q Consensus 121 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~---~L~~L~l~~~~--~~~~~-------~~~~~~~~~~~L~~L~l~~~~~ 188 (402)
..+..+.++++++++ +.......++.... +|+..+++... ...+. .++.+ -.||+|+..+++++..
T Consensus 27 ~~~d~~~evdLSGNt-igtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aL-lkcp~l~~v~LSDNAf 104 (388)
T COG5238 27 EMMDELVEVDLSGNT-IGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKAL-LKCPRLQKVDLSDNAF 104 (388)
T ss_pred HhhcceeEEeccCCc-ccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHH-hcCCcceeeecccccc
Confidence 346788889998876 76666655555443 44444444310 00011 11122 2367777777776322
Q ss_pred C--chHHHHHHHhcCCCCCEEccCCC
Q 015721 189 I--SDSGVIDLVNGCQNIKFLDLNKC 212 (402)
Q Consensus 189 ~--~~~~~~~~~~~~~~L~~L~l~~~ 212 (402)
- ....+..++++...|.+|.+++|
T Consensus 105 g~~~~e~L~d~is~~t~l~HL~l~Nn 130 (388)
T COG5238 105 GSEFPEELGDLISSSTDLVHLKLNNN 130 (388)
T ss_pred CcccchHHHHHHhcCCCceeEEeecC
Confidence 1 11223445556666777777664
No 46
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=97.88 E-value=9e-08 Score=71.90 Aligned_cols=152 Identities=21% Similarity=0.220 Sum_probs=81.2
Q ss_pred cCcceEEeccCCcCCCCCCCCChhhHHHHHhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHH
Q 015721 65 FSRLVELDLSQSVSRSFYPGVTDSDLAVIADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSA 144 (402)
Q Consensus 65 ~~~l~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 144 (402)
+++++.|.++++......+.+ ..+.+|+.|++.+.. +++ ++.-.+.+++|+.|++..+. +. .++.
T Consensus 32 ~s~ITrLtLSHNKl~~vppni---------a~l~nlevln~~nnq-ie~--lp~~issl~klr~lnvgmnr-l~--~lpr 96 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLTVVPPNI---------AELKNLEVLNLSNNQ-IEE--LPTSISSLPKLRILNVGMNR-LN--ILPR 96 (264)
T ss_pred hhhhhhhhcccCceeecCCcH---------HHhhhhhhhhcccch-hhh--cChhhhhchhhhheecchhh-hh--cCcc
Confidence 345666677765432222222 135677777777632 332 22223457777777776533 22 2344
Q ss_pred HHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHH
Q 015721 145 VAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVS 224 (402)
Q Consensus 145 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 224 (402)
-++.+|.|+.|++.++ ++.+..++.-+-.+..|+.|++.++ .+ +.++.-+..+.+|+.|.+..+..++ ++.-.
T Consensus 97 gfgs~p~levldltyn-nl~e~~lpgnff~m~tlralyl~dn-df--e~lp~dvg~lt~lqil~lrdndll~---lpkei 169 (264)
T KOG0617|consen 97 GFGSFPALEVLDLTYN-NLNENSLPGNFFYMTTLRALYLGDN-DF--EILPPDVGKLTNLQILSLRDNDLLS---LPKEI 169 (264)
T ss_pred ccCCCchhhhhhcccc-ccccccCCcchhHHHHHHHHHhcCC-Cc--ccCChhhhhhcceeEEeeccCchhh---CcHHH
Confidence 4566777777777765 3444444433333566677777663 22 2244445666777777776543332 33333
Q ss_pred hcCCCCCEEEecCC
Q 015721 225 KSCSSLKTLKLLDC 238 (402)
Q Consensus 225 ~~~~~L~~L~l~~~ 238 (402)
..+..|++|++.++
T Consensus 170 g~lt~lrelhiqgn 183 (264)
T KOG0617|consen 170 GDLTRLRELHIQGN 183 (264)
T ss_pred HHHHHHHHHhcccc
Confidence 44556666666653
No 47
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.86 E-value=8.7e-06 Score=63.23 Aligned_cols=85 Identities=18% Similarity=0.310 Sum_probs=72.4
Q ss_pred CcEEeccCCCCCChHHHHHHHhccCCCcEEEE-eCCCCCHHHHHHHHHhCCCCCEEeccCCCCCCHhHHHhhccCCCCcc
Q 015721 309 LEALDIGCCEEVTDAAFQDLGEVELSLKVLKV-NCPKVTVVGIGNVLEKCASLEYIDVRSCPHVTQASCEEAGLQFPQCC 387 (402)
Q Consensus 309 L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l-~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~~~~~~p~l~ 387 (402)
++.++-++ ..+...+++++.... +++.|.+ +|..+.+..++.+..-.|+|+.|+|++|+.|++.++..+. ++++|+
T Consensus 103 IeaVDAsd-s~I~~eGle~L~~l~-~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~-~lknLr 179 (221)
T KOG3864|consen 103 IEAVDASD-SSIMYEGLEHLRDLR-SIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLL-KLKNLR 179 (221)
T ss_pred EEEEecCC-chHHHHHHHHHhccc-hhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHH-HhhhhH
Confidence 55666666 557778888887655 8888999 9999999999999888999999999999999999999998 799999
Q ss_pred eEecccccc
Q 015721 388 KVNFAGCLF 396 (402)
Q Consensus 388 ~l~~~~~~~ 396 (402)
.+.+.+-+.
T Consensus 180 ~L~l~~l~~ 188 (221)
T KOG3864|consen 180 RLHLYDLPY 188 (221)
T ss_pred HHHhcCchh
Confidence 998877543
No 48
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.76 E-value=0.0011 Score=54.38 Aligned_cols=224 Identities=17% Similarity=0.170 Sum_probs=125.2
Q ss_pred HHHHHHhCCCCcEEecCCCCCCchHHHH---HHHhcCCCCCEEccCCCCCCC--cc------cHHHHHhcCCCCCEEEec
Q 015721 168 LQALSKNCRNLEELGLLGCTSISDSGVI---DLVNGCQNIKFLDLNKCSNIG--DN------GISSVSKSCSSLKTLKLL 236 (402)
Q Consensus 168 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~---~~~~~~~~L~~L~l~~~~~~~--~~------~~~~~~~~~~~L~~L~l~ 236 (402)
+..+.. +..+.+++++++ .+..+... ..+.+-.+|+..+++....-. +. .+......||+|+..+++
T Consensus 23 ~eel~~-~d~~~evdLSGN-tigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LS 100 (388)
T COG5238 23 VEELEM-MDELVEVDLSGN-TIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLS 100 (388)
T ss_pred HHHHHh-hcceeEEeccCC-cccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeecc
Confidence 444443 788999999994 45544333 334445677777776532111 11 122233468899999998
Q ss_pred CCCCCC--hHHHHHHHHhCCCCcEEEecCCCCCChH-------HHHHHHHH----hcCCCcEEEccCCC--CCChHHHHH
Q 015721 237 DCYKVG--DKSILSLAKFCKNLETLIIGGCRDISDE-------SIKHLAAS----CKSSLKNLRMDWCL--NISDSSLSC 301 (402)
Q Consensus 237 ~~~~~~--~~~~~~~~~~~~~L~~L~l~~~~~~~~~-------~~~~l~~~----~~~~L~~L~l~~~~--~~~~~~l~~ 301 (402)
.+.... ...+..+......|+.|.+.+| .+.+. .+.+++.. -.|.|+.+....+. +-+......
T Consensus 101 DNAfg~~~~e~L~d~is~~t~l~HL~l~Nn-GlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~ 179 (388)
T COG5238 101 DNAFGSEFPEELGDLISSSTDLVHLKLNNN-GLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAA 179 (388)
T ss_pred ccccCcccchHHHHHHhcCCCceeEEeecC-CCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHH
Confidence 754332 2334455555678899988775 33332 22233211 13678877766542 222333444
Q ss_pred HHhcCCCCcEEeccCCCCCChHHHHHHH----hccCCCcEEEEeCCCCCHHH---HHHHHHhCCCCCEEeccCCCCCCHh
Q 015721 302 ILSQCRNLEALDIGCCEEVTDAAFQDLG----EVELSLKVLKVNCPKVTVVG---IGNVLEKCASLEYIDVRSCPHVTQA 374 (402)
Q Consensus 302 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~----~~~~~L~~L~l~~~~~~~~~---l~~~~~~~~~L~~L~l~~c~~~~~~ 374 (402)
.+..-.+|+.+.+..+ .+...++..+. .++.+|+.|++..|.++-.+ +...+...+.|+.|.+..|-- +.+
T Consensus 180 ~l~sh~~lk~vki~qN-gIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDCll-s~~ 257 (388)
T COG5238 180 LLESHENLKEVKIQQN-GIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLL-SNE 257 (388)
T ss_pred HHHhhcCceeEEeeec-CcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhh-ccc
Confidence 5555578888888863 34444443332 34558888888556665443 344455667788888888853 334
Q ss_pred HHHhhcc-----CCCCcceEecccccc
Q 015721 375 SCEEAGL-----QFPQCCKVNFAGCLF 396 (402)
Q Consensus 375 ~~~~~~~-----~~p~l~~l~~~~~~~ 396 (402)
+.+.+-. .+|++..+......+
T Consensus 258 G~~~v~~~f~e~~~p~l~~L~~~Yne~ 284 (388)
T COG5238 258 GVKSVLRRFNEKFVPNLMPLPGDYNER 284 (388)
T ss_pred cHHHHHHHhhhhcCCCccccccchhhh
Confidence 4433322 355655555554443
No 49
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=97.34 E-value=1.2e-06 Score=65.90 Aligned_cols=79 Identities=18% Similarity=0.184 Sum_probs=36.3
Q ss_pred CCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCC
Q 015721 124 CSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQN 203 (402)
Q Consensus 124 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 203 (402)
++...|.++.+. ++. ++.-...+.+|+.|++.++. +. .++...+.+++|+.|++.. +.+.. ++.-++.+|.
T Consensus 33 s~ITrLtLSHNK-l~~--vppnia~l~nlevln~~nnq-ie--~lp~~issl~klr~lnvgm-nrl~~--lprgfgs~p~ 103 (264)
T KOG0617|consen 33 SNITRLTLSHNK-LTV--VPPNIAELKNLEVLNLSNNQ-IE--ELPTSISSLPKLRILNVGM-NRLNI--LPRGFGSFPA 103 (264)
T ss_pred hhhhhhhcccCc-eee--cCCcHHHhhhhhhhhcccch-hh--hcChhhhhchhhhheecch-hhhhc--CccccCCCch
Confidence 445555555543 322 11112235666666666532 11 1222333366666666554 22211 3334455566
Q ss_pred CCEEccCC
Q 015721 204 IKFLDLNK 211 (402)
Q Consensus 204 L~~L~l~~ 211 (402)
|+.|++.+
T Consensus 104 levldlty 111 (264)
T KOG0617|consen 104 LEVLDLTY 111 (264)
T ss_pred hhhhhccc
Confidence 66666655
No 50
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=97.29 E-value=2.2e-05 Score=72.64 Aligned_cols=55 Identities=22% Similarity=0.274 Sum_probs=30.1
Q ss_pred HHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHH
Q 015721 142 LSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDL 197 (402)
Q Consensus 142 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 197 (402)
+..+..-+++++.+.+-..+.-.....-.++. +..|+.|.+.+|.--+..++..+
T Consensus 76 Lq~i~d~lqkt~~lkl~~~pa~~pt~pi~ifp-F~sLr~LElrg~~L~~~~GL~~l 130 (1096)
T KOG1859|consen 76 LQRILDFLQKTKVLKLLPSPARDPTEPISIFP-FRSLRVLELRGCDLSTAKGLQEL 130 (1096)
T ss_pred HHHHHHHHhhheeeeecccCCCCCCCCceecc-ccceeeEEecCcchhhhhhhHHH
Confidence 33445556777777766543222221223333 77888888888765444444433
No 51
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=97.28 E-value=1.3e-05 Score=74.07 Aligned_cols=206 Identities=17% Similarity=0.164 Sum_probs=91.2
Q ss_pred HHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHH
Q 015721 116 IASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVI 195 (402)
Q Consensus 116 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 195 (402)
+..+...+++++.|.+-....-.... +--+..+..|+.|.+.+|+.-...++..+- ..|++|- |... ...+.
T Consensus 76 Lq~i~d~lqkt~~lkl~~~pa~~pt~-pi~ifpF~sLr~LElrg~~L~~~~GL~~lr---~qLe~LI---C~~S-l~Al~ 147 (1096)
T KOG1859|consen 76 LQRILDFLQKTKVLKLLPSPARDPTE-PISIFPFRSLRVLELRGCDLSTAKGLQELR---HQLEKLI---CHNS-LDALR 147 (1096)
T ss_pred HHHHHHHHhhheeeeecccCCCCCCC-CceeccccceeeEEecCcchhhhhhhHHHH---Hhhhhhh---hhcc-HHHHH
Confidence 34444555677777765543222221 112234788999999998654433343332 2344442 2211 11233
Q ss_pred HHHhcC----------CCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCC
Q 015721 196 DLVNGC----------QNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCR 265 (402)
Q Consensus 196 ~~~~~~----------~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 265 (402)
.++..| ..|...+.+++ .+. .+..-.+.++.|+.|+++.+.... .. ....++.|+.|+++.+
T Consensus 148 ~v~ascggd~~ns~~Wn~L~~a~fsyN-~L~--~mD~SLqll~ale~LnLshNk~~~---v~-~Lr~l~~LkhLDlsyN- 219 (1096)
T KOG1859|consen 148 HVFASCGGDISNSPVWNKLATASFSYN-RLV--LMDESLQLLPALESLNLSHNKFTK---VD-NLRRLPKLKHLDLSYN- 219 (1096)
T ss_pred HHHHHhccccccchhhhhHhhhhcchh-hHH--hHHHHHHHHHHhhhhccchhhhhh---hH-HHHhcccccccccccc-
Confidence 333322 12223223221 111 122333345667777776643221 11 3334667777777542
Q ss_pred CCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCC
Q 015721 266 DISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKV 345 (402)
Q Consensus 266 ~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 345 (402)
.+.. +..+.... ..|+.|.+.++ .++ .+.. +.++.+|+.|+++++-......+..+.... .|+.|++..|.+
T Consensus 220 ~L~~--vp~l~~~g-c~L~~L~lrnN-~l~--tL~g-ie~LksL~~LDlsyNll~~hseL~pLwsLs-~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 220 CLRH--VPQLSMVG-CKLQLLNLRNN-ALT--TLRG-IENLKSLYGLDLSYNLLSEHSELEPLWSLS-SLIVLWLEGNPL 291 (1096)
T ss_pred hhcc--ccccchhh-hhheeeeeccc-HHH--hhhh-HHhhhhhhccchhHhhhhcchhhhHHHHHH-HHHHHhhcCCcc
Confidence 1211 11111111 23666666654 222 2333 456666666666653322222333333333 566666644443
No 52
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.12 E-value=0.0013 Score=58.30 Aligned_cols=174 Identities=17% Similarity=0.314 Sum_probs=99.7
Q ss_pred hCCCCcEEecCCCCCCchHHHHHHHhcC-CCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHh
Q 015721 174 NCRNLEELGLLGCTSISDSGVIDLVNGC-QNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKF 252 (402)
Q Consensus 174 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 252 (402)
.+++++.|++++| .+.. ++ .+ ++|++|.+++|..+.. ++... .++|++|.+.+|..+. . -
T Consensus 50 ~~~~l~~L~Is~c-~L~s--LP----~LP~sLtsL~Lsnc~nLts--LP~~L--P~nLe~L~Ls~Cs~L~-----s---L 110 (426)
T PRK15386 50 EARASGRLYIKDC-DIES--LP----VLPNELTEITIENCNNLTT--LPGSI--PEGLEKLTVCHCPEIS-----G---L 110 (426)
T ss_pred HhcCCCEEEeCCC-CCcc--cC----CCCCCCcEEEccCCCCccc--CCchh--hhhhhheEccCccccc-----c---c
Confidence 3789999999987 4433 22 23 4699999998876543 22222 2579999999875543 1 1
Q ss_pred CCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhcc
Q 015721 253 CKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVE 332 (402)
Q Consensus 253 ~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 332 (402)
.+.|+.|.+.+. ... .+.. .+++|+.|.+.+........+.. .-.++|+.|.+++|..+. .. ...+
T Consensus 111 P~sLe~L~L~~n-~~~--~L~~----LPssLk~L~I~~~n~~~~~~lp~--~LPsSLk~L~Is~c~~i~---LP--~~LP 176 (426)
T PRK15386 111 PESVRSLEIKGS-ATD--SIKN----VPNGLTSLSINSYNPENQARIDN--LISPSLKTLSLTGCSNII---LP--EKLP 176 (426)
T ss_pred ccccceEEeCCC-CCc--cccc----CcchHhheecccccccccccccc--ccCCcccEEEecCCCccc---Cc--cccc
Confidence 357888888542 221 1233 35788888885432111111111 112579999999887542 11 1233
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHhC-CCCCEEeccCCCCCCHhHHHhhccCC
Q 015721 333 LSLKVLKVNCPKVTVVGIGNVLEKC-ASLEYIDVRSCPHVTQASCEEAGLQF 383 (402)
Q Consensus 333 ~~L~~L~l~~~~~~~~~l~~~~~~~-~~L~~L~l~~c~~~~~~~~~~~~~~~ 383 (402)
.+|+.|.++.+......+. ...+ +++ .|.+.+|-.+....+...+..+
T Consensus 177 ~SLk~L~ls~n~~~sLeI~--~~sLP~nl-~L~f~n~lkL~~~~f~d~~i~~ 225 (426)
T PRK15386 177 ESLQSITLHIEQKTTWNIS--FEGFPDGL-DIDLQNSVLLSPDVFKDKNITF 225 (426)
T ss_pred ccCcEEEecccccccccCc--cccccccc-EechhhhcccCHHHhhcccccc
Confidence 4899999843321111111 1112 466 8888888777666665555333
No 53
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=97.09 E-value=0.00062 Score=34.39 Aligned_cols=24 Identities=21% Similarity=0.599 Sum_probs=21.9
Q ss_pred CCCCCEEeccCCCCCCHhHHHhhc
Q 015721 357 CASLEYIDVRSCPHVTQASCEEAG 380 (402)
Q Consensus 357 ~~~L~~L~l~~c~~~~~~~~~~~~ 380 (402)
||+|++|++++|+.+++.++..++
T Consensus 1 c~~L~~L~l~~C~~itD~gl~~l~ 24 (26)
T smart00367 1 CPNLRELDLSGCTNITDEGLQALA 24 (26)
T ss_pred CCCCCEeCCCCCCCcCHHHHHHHh
Confidence 689999999999999999998776
No 54
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.01 E-value=0.00078 Score=59.66 Aligned_cols=169 Identities=16% Similarity=0.287 Sum_probs=87.8
Q ss_pred hhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHh
Q 015721 95 DGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKN 174 (402)
Q Consensus 95 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 174 (402)
..++++++|++++|. +... +. --++|++|.+++|..+.. ++... .++|+.|++.+|..+.. +
T Consensus 49 ~~~~~l~~L~Is~c~-L~sL--P~---LP~sLtsL~Lsnc~nLts--LP~~L--P~nLe~L~Ls~Cs~L~s-----L--- 110 (426)
T PRK15386 49 EEARASGRLYIKDCD-IESL--PV---LPNELTEITIENCNNLTT--LPGSI--PEGLEKLTVCHCPEISG-----L--- 110 (426)
T ss_pred HHhcCCCEEEeCCCC-Cccc--CC---CCCCCcEEEccCCCCccc--CCchh--hhhhhheEccCcccccc-----c---
Confidence 457889999999873 4432 21 124699999988765532 22211 35788898888754321 1
Q ss_pred CCCCcEEecCCCCCCchHHHHHHHhcC-CCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhC
Q 015721 175 CRNLEELGLLGCTSISDSGVIDLVNGC-QNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFC 253 (402)
Q Consensus 175 ~~~L~~L~l~~~~~~~~~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 253 (402)
.++|+.|++.. ..... + ..+ ++|+.|.+.+.+......++.. -.++|++|.+.+|.... ++.. -.
T Consensus 111 P~sLe~L~L~~-n~~~~--L----~~LPssLk~L~I~~~n~~~~~~lp~~--LPsSLk~L~Is~c~~i~---LP~~--LP 176 (426)
T PRK15386 111 PESVRSLEIKG-SATDS--I----KNVPNGLTSLSINSYNPENQARIDNL--ISPSLKTLSLTGCSNII---LPEK--LP 176 (426)
T ss_pred ccccceEEeCC-CCCcc--c----ccCcchHhheeccccccccccccccc--cCCcccEEEecCCCccc---Cccc--cc
Confidence 35678888764 22221 1 122 4677777754222111111111 12568888888765432 1111 12
Q ss_pred CCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHH
Q 015721 254 KNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSL 299 (402)
Q Consensus 254 ~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l 299 (402)
..|+.|.++.+...+ +.-.....++++ .|.+.+|..+..+.+
T Consensus 177 ~SLk~L~ls~n~~~s---LeI~~~sLP~nl-~L~f~n~lkL~~~~f 218 (426)
T PRK15386 177 ESLQSITLHIEQKTT---WNISFEGFPDGL-DIDLQNSVLLSPDVF 218 (426)
T ss_pred ccCcEEEeccccccc---ccCccccccccc-EechhhhcccCHHHh
Confidence 478888886531110 000011223556 777776655554443
No 55
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.64 E-value=0.00027 Score=57.52 Aligned_cols=9 Identities=22% Similarity=-0.079 Sum_probs=4.2
Q ss_pred CCCCcEEEe
Q 015721 253 CKNLETLII 261 (402)
Q Consensus 253 ~~~L~~L~l 261 (402)
+|+|++|+-
T Consensus 142 l~~L~~LD~ 150 (260)
T KOG2739|consen 142 LPSLKYLDG 150 (260)
T ss_pred hhhhccccc
Confidence 444544443
No 56
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=96.63 E-value=0.003 Score=31.87 Aligned_cols=24 Identities=42% Similarity=0.843 Sum_probs=15.8
Q ss_pred CCCCcEEeccCCCCCChHHHHHHH
Q 015721 306 CRNLEALDIGCCEEVTDAAFQDLG 329 (402)
Q Consensus 306 ~~~L~~L~l~~~~~~~~~~~~~~~ 329 (402)
||+|+.|++++|..++|.++..+.
T Consensus 1 c~~L~~L~l~~C~~itD~gl~~l~ 24 (26)
T smart00367 1 CPNLRELDLSGCTNITDEGLQALA 24 (26)
T ss_pred CCCCCEeCCCCCCCcCHHHHHHHh
Confidence 466677777777667666666554
No 57
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=96.48 E-value=0.00023 Score=45.10 Aligned_cols=13 Identities=23% Similarity=0.537 Sum_probs=6.4
Q ss_pred hCCCCCEEeccCC
Q 015721 356 KCASLEYIDVRSC 368 (402)
Q Consensus 356 ~~~~L~~L~l~~c 368 (402)
.+++|++|++++|
T Consensus 47 ~l~~L~~L~l~~N 59 (61)
T PF13855_consen 47 NLPNLRYLDLSNN 59 (61)
T ss_dssp TSTTESEEEETSS
T ss_pred CCCCCCEEeCcCC
Confidence 4455555555443
No 58
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.38 E-value=0.0013 Score=54.15 Aligned_cols=103 Identities=27% Similarity=0.310 Sum_probs=51.7
Q ss_pred CCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCCccCChHHHHHHHHhCC
Q 015721 97 FKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGCKSVTDGTLQALSKNCR 176 (402)
Q Consensus 97 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 176 (402)
+.+.+.|+..+|. +++. .++..++.|+.|.++-+. ++. + .-+..|++|++|.+..+....-..+. ..+++|
T Consensus 18 l~~vkKLNcwg~~-L~DI---sic~kMp~lEVLsLSvNk-Iss--L-~pl~rCtrLkElYLRkN~I~sldEL~-YLknlp 88 (388)
T KOG2123|consen 18 LENVKKLNCWGCG-LDDI---SICEKMPLLEVLSLSVNK-ISS--L-APLQRCTRLKELYLRKNCIESLDELE-YLKNLP 88 (388)
T ss_pred HHHhhhhcccCCC-ccHH---HHHHhcccceeEEeeccc-ccc--c-hhHHHHHHHHHHHHHhcccccHHHHH-HHhcCc
Confidence 3456667776664 5543 234556777777776544 332 1 11244677777776654322222222 233466
Q ss_pred CCcEEecCCCCCCchHH---HHHHHhcCCCCCEEc
Q 015721 177 NLEELGLLGCTSISDSG---VIDLVNGCQNIKFLD 208 (402)
Q Consensus 177 ~L~~L~l~~~~~~~~~~---~~~~~~~~~~L~~L~ 208 (402)
+|+.|-+..+......+ -...+.-+|+|++|+
T Consensus 89 sLr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 89 SLRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 66666665543322111 123445556666653
No 59
>PLN03215 ascorbic acid mannose pathway regulator 1; Provisional
Probab=96.35 E-value=0.0028 Score=55.51 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=34.4
Q ss_pred ccccCCHHHHHHHHccCCCcchhhHHHHhhHHHHHhhhh
Q 015721 6 INEVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQST 44 (402)
Q Consensus 6 ~~~~LP~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~ 44 (402)
-+++||+|++..|..+|+..-|+++++.|||.||.....
T Consensus 3 ~Ws~Lp~dll~~i~~~l~~~~d~~~~~~vC~sWr~a~~~ 41 (373)
T PLN03215 3 DWSTLPEELLHMIAGRLFSNVELKRFRSICRSWRSSVSG 41 (373)
T ss_pred ChhhCCHHHHHHHHhhCCcHHHHHHHHhhhhhHHHhccc
Confidence 367899999999999997667999999999999987543
No 60
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=96.34 E-value=0.0014 Score=41.39 Aligned_cols=37 Identities=32% Similarity=0.343 Sum_probs=17.2
Q ss_pred cCCCCCeEecCCCCCcChHHHHHHHhcCccCcEEecCCC
Q 015721 122 GLCSLQSLDLSYCRKLTDKGLSAVAEGCQDLRSLHLAGC 160 (402)
Q Consensus 122 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~ 160 (402)
.+++|++|+++++. +... .+..+.++++|++|+++++
T Consensus 23 ~l~~L~~L~l~~N~-l~~i-~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 23 NLPNLETLDLSNNN-LTSI-PPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TGTTESEEEETSSS-ESEE-ETTTTTTSTTESEEEETSS
T ss_pred CCCCCCEeEccCCc-cCcc-CHHHHcCCCCCCEEeCcCC
Confidence 44555555555443 3221 1122344556666665554
No 61
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.34 E-value=0.0013 Score=53.59 Aligned_cols=109 Identities=22% Similarity=0.275 Sum_probs=54.6
Q ss_pred CCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCCh-HHHHHHHhcc
Q 015721 254 KNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTD-AAFQDLGEVE 332 (402)
Q Consensus 254 ~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~ 332 (402)
..|+.|.+.++...+-..+..+ ++|++|.++.+..-...++..+...+|+|++|+++++. +.+ ..+..+...
T Consensus 43 ~~le~ls~~n~gltt~~~~P~L-----p~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nk-i~~lstl~pl~~l- 115 (260)
T KOG2739|consen 43 VELELLSVINVGLTTLTNFPKL-----PKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNK-IKDLSTLRPLKEL- 115 (260)
T ss_pred cchhhhhhhccceeecccCCCc-----chhhhhcccCCcccccccceehhhhCCceeEEeecCCc-cccccccchhhhh-
Confidence 4455555555433333333333 67788877654222222445556667888888887733 332 222222222
Q ss_pred CCCcEEEE-eCCCCCHH-HHHHHHHhCCCCCEEeccCCC
Q 015721 333 LSLKVLKV-NCPKVTVV-GIGNVLEKCASLEYIDVRSCP 369 (402)
Q Consensus 333 ~~L~~L~l-~~~~~~~~-~l~~~~~~~~~L~~L~l~~c~ 369 (402)
++|..|++ +|...... .-......+|+|+.|+-..+.
T Consensus 116 ~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~ 154 (260)
T KOG2739|consen 116 ENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVD 154 (260)
T ss_pred cchhhhhcccCCccccccHHHHHHHHhhhhccccccccC
Confidence 26777777 44322211 112334456777777655543
No 62
>KOG2997 consensus F-box protein FBX9 [General function prediction only]
Probab=96.16 E-value=0.004 Score=52.07 Aligned_cols=38 Identities=26% Similarity=0.462 Sum_probs=32.1
Q ss_pred ccCCHHHHHHHHcc-----CCCcchhhHHHHhhHHHHHhhhhcc
Q 015721 8 EVLRDDELRSILSR-----LEDDKDKERFGLVCKRWLHLQSTER 46 (402)
Q Consensus 8 ~~LP~eil~~If~~-----L~~~~~~~~~~~vcr~W~~~~~~~~ 46 (402)
..|||||+..||.. ++ .+++.+++.|||.|+..++.+.
T Consensus 108 ~~LPdEvLm~I~~~vv~~~~d-~rsL~~~s~vCr~F~~~~R~~~ 150 (366)
T KOG2997|consen 108 SVLPDEVLMRIFRWVVSSLLD-LRSLEQLSLVCRGFYKCARDPE 150 (366)
T ss_pred hhCCHHHHHHHHHHHHhhhcc-hhhHHHhHhhHHHHHHHHcChH
Confidence 67999999999964 46 3899999999999998876653
No 63
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.14 E-value=0.0024 Score=52.69 Aligned_cols=112 Identities=25% Similarity=0.238 Sum_probs=65.2
Q ss_pred CCCCcEEEecCCCCCChHHH-HHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhc
Q 015721 253 CKNLETLIIGGCRDISDESI-KHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEV 331 (402)
Q Consensus 253 ~~~L~~L~l~~~~~~~~~~~-~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 331 (402)
+.+.+.|++.|| .++|..+ ..+ +.|+.|.|+-+ .++ .+.. +..|++|+.|++..+ .+.+-.--.....
T Consensus 18 l~~vkKLNcwg~-~L~DIsic~kM-----p~lEVLsLSvN-kIs--sL~p-l~rCtrLkElYLRkN-~I~sldEL~YLkn 86 (388)
T KOG2123|consen 18 LENVKKLNCWGC-GLDDISICEKM-----PLLEVLSLSVN-KIS--SLAP-LQRCTRLKELYLRKN-CIESLDELEYLKN 86 (388)
T ss_pred HHHhhhhcccCC-CccHHHHHHhc-----ccceeEEeecc-ccc--cchh-HHHHHHHHHHHHHhc-ccccHHHHHHHhc
Confidence 346677888776 3454333 233 78888888765 444 3333 678888998888863 3433222233445
Q ss_pred cCCCcEEEEeCC-CC--CHH-HHHHHHHhCCCCCEEeccCCCCCCHhHHHh
Q 015721 332 ELSLKVLKVNCP-KV--TVV-GIGNVLEKCASLEYIDVRSCPHVTQASCEE 378 (402)
Q Consensus 332 ~~~L~~L~l~~~-~~--~~~-~l~~~~~~~~~L~~L~l~~c~~~~~~~~~~ 378 (402)
.|+|+.|+|.-| .. ... .-...++-+|+|++|+= ..++.+.+++
T Consensus 87 lpsLr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLDn---v~VteeEle~ 134 (388)
T KOG2123|consen 87 LPSLRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLDN---VPVTEEELEE 134 (388)
T ss_pred CchhhhHhhccCCcccccchhHHHHHHHHcccchhccC---ccccHHHHHH
Confidence 568888888222 11 111 12245677888888843 4455555444
No 64
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=96.06 E-value=0.0058 Score=35.43 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=21.4
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCC
Q 015721 334 SLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCP 369 (402)
Q Consensus 334 ~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~ 369 (402)
+|++|++..+.+++ +...+..+++|+.|++++|+
T Consensus 2 ~L~~L~l~~N~i~~--l~~~l~~l~~L~~L~l~~N~ 35 (44)
T PF12799_consen 2 NLEELDLSNNQITD--LPPELSNLPNLETLNLSNNP 35 (44)
T ss_dssp T-SEEEETSSS-SS--HGGHGTTCTTSSEEEETSSC
T ss_pred cceEEEccCCCCcc--cCchHhCCCCCCEEEecCCC
Confidence 67777776667665 33334677777777777764
No 65
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=96.00 E-value=0.0065 Score=55.32 Aligned_cols=169 Identities=31% Similarity=0.364 Sum_probs=70.6
Q ss_pred CCCCeEecCCCCCcChHHHHHHHhcCc-cCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCC
Q 015721 124 CSLQSLDLSYCRKLTDKGLSAVAEGCQ-DLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQ 202 (402)
Q Consensus 124 ~~L~~L~l~~~~~~~~~~~~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 202 (402)
+.++.|++.++. +.. ++....... +|+.|++++.. +.. ++.-...+++|+.|++..+ .+.+ +.......+
T Consensus 116 ~~l~~L~l~~n~-i~~--i~~~~~~~~~nL~~L~l~~N~-i~~--l~~~~~~l~~L~~L~l~~N-~l~~--l~~~~~~~~ 186 (394)
T COG4886 116 TNLTSLDLDNNN-ITD--IPPLIGLLKSNLKELDLSDNK-IES--LPSPLRNLPNLKNLDLSFN-DLSD--LPKLLSNLS 186 (394)
T ss_pred cceeEEecCCcc-ccc--Cccccccchhhcccccccccc-hhh--hhhhhhccccccccccCCc-hhhh--hhhhhhhhh
Confidence 456666665533 221 222222232 56666666542 111 1112334666666666652 2322 222222445
Q ss_pred CCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCC-hHHHHHHHHHhcC
Q 015721 203 NIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDIS-DESIKHLAASCKS 281 (402)
Q Consensus 203 ~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~l~~~~~~ 281 (402)
+|+.|.++++. +.. ++........|+++.+.++..+. .......+.++..+.+.+..... ...+..+ +
T Consensus 187 ~L~~L~ls~N~-i~~--l~~~~~~~~~L~~l~~~~N~~~~---~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l-----~ 255 (394)
T COG4886 187 NLNNLDLSGNK-ISD--LPPEIELLSALEELDLSNNSIIE---LLSSLSNLKNLSGLELSNNKLEDLPESIGNL-----S 255 (394)
T ss_pred hhhheeccCCc-ccc--CchhhhhhhhhhhhhhcCCccee---cchhhhhcccccccccCCceeeeccchhccc-----c
Confidence 66666666532 222 22221222346666665542111 11122223444444443321111 1122222 4
Q ss_pred CCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccC
Q 015721 282 SLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGC 316 (402)
Q Consensus 282 ~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~ 316 (402)
+++.|+++++ .++ .+.. +....+++.|++++
T Consensus 256 ~l~~L~~s~n-~i~--~i~~-~~~~~~l~~L~~s~ 286 (394)
T COG4886 256 NLETLDLSNN-QIS--SISS-LGSLTNLRELDLSG 286 (394)
T ss_pred ccceeccccc-ccc--cccc-ccccCccCEEeccC
Confidence 5666666655 232 1222 45556666666665
No 66
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=95.93 E-value=0.007 Score=47.53 Aligned_cols=106 Identities=17% Similarity=0.078 Sum_probs=47.9
Q ss_pred CCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccC
Q 015721 254 KNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVEL 333 (402)
Q Consensus 254 ~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 333 (402)
.+...+++++........+..+ +.|.+|.+.++ .++. .-..+..-+|+|+.|.+.++....-..+..++ .+|
T Consensus 42 d~~d~iDLtdNdl~~l~~lp~l-----~rL~tLll~nN-rIt~-I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa-~~p 113 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKLDNLPHL-----PRLHTLLLNNN-RITR-IDPDLDTFLPNLKTLILTNNSIQELGDLDPLA-SCP 113 (233)
T ss_pred cccceecccccchhhcccCCCc-----cccceEEecCC-ccee-eccchhhhccccceEEecCcchhhhhhcchhc-cCC
Confidence 3455555554332222222222 56666666655 3331 11122334566666666653322112222232 233
Q ss_pred CCcEEEEeCCCCCHHHH--HHHHHhCCCCCEEeccC
Q 015721 334 SLKVLKVNCPKVTVVGI--GNVLEKCASLEYIDVRS 367 (402)
Q Consensus 334 ~L~~L~l~~~~~~~~~l--~~~~~~~~~L~~L~l~~ 367 (402)
+|+.|.+-.|.++...- ..++..+|+|+.|++..
T Consensus 114 ~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 114 KLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred ccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 66666664444433211 12344566666666654
No 67
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=95.93 E-value=0.0093 Score=34.59 Aligned_cols=35 Identities=29% Similarity=0.342 Sum_probs=22.6
Q ss_pred CCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCC
Q 015721 281 SSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCE 318 (402)
Q Consensus 281 ~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~ 318 (402)
++|++|+++++ .++ .+...+..+++|+.|+++++.
T Consensus 1 ~~L~~L~l~~N-~i~--~l~~~l~~l~~L~~L~l~~N~ 35 (44)
T PF12799_consen 1 KNLEELDLSNN-QIT--DLPPELSNLPNLETLNLSNNP 35 (44)
T ss_dssp TT-SEEEETSS-S-S--SHGGHGTTCTTSSEEEETSSC
T ss_pred CcceEEEccCC-CCc--ccCchHhCCCCCCEEEecCCC
Confidence 36778888776 555 344446778888888888754
No 68
>PLN03150 hypothetical protein; Provisional
Probab=95.75 E-value=0.039 Score=53.27 Aligned_cols=108 Identities=19% Similarity=0.147 Sum_probs=67.3
Q ss_pred cCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCC
Q 015721 151 DLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSL 230 (402)
Q Consensus 151 ~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L 230 (402)
.++.|++.++. +.. .++.....+++|+.|+++++ .+.. .++..+..+++|+.|+++++..... ++.....+++|
T Consensus 419 ~v~~L~L~~n~-L~g-~ip~~i~~L~~L~~L~Ls~N-~l~g-~iP~~~~~l~~L~~LdLs~N~lsg~--iP~~l~~L~~L 492 (623)
T PLN03150 419 FIDGLGLDNQG-LRG-FIPNDISKLRHLQSINLSGN-SIRG-NIPPSLGSITSLEVLDLSYNSFNGS--IPESLGQLTSL 492 (623)
T ss_pred EEEEEECCCCC-ccc-cCCHHHhCCCCCCEEECCCC-cccC-cCChHHhCCCCCCEEECCCCCCCCC--CchHHhcCCCC
Confidence 37788888763 222 23334455899999999884 3332 2445577889999999998644333 45556678999
Q ss_pred CEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCC
Q 015721 231 KTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCR 265 (402)
Q Consensus 231 ~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 265 (402)
+.|+++++..... ....+.....++..+++.++.
T Consensus 493 ~~L~Ls~N~l~g~-iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 493 RILNLNGNSLSGR-VPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CEEECcCCccccc-CChHHhhccccCceEEecCCc
Confidence 9999988643221 111222223456778877654
No 69
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=95.74 E-value=0.0073 Score=51.03 Aligned_cols=37 Identities=32% Similarity=0.436 Sum_probs=33.3
Q ss_pred ccCC----HHHHHHHHccCCCcchhhHHHHhhHHHHHhhhhc
Q 015721 8 EVLR----DDELRSILSRLEDDKDKERFGLVCKRWLHLQSTE 45 (402)
Q Consensus 8 ~~LP----~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~~ 45 (402)
..|| ++|.+.||+||+. .++..+-.|||+|+++..+.
T Consensus 76 ~~lP~~gl~hi~e~ilsyld~-~sLc~celv~k~W~r~l~dg 116 (499)
T KOG0281|consen 76 TALPEQGLDHIAENILSYLDA-LSLCACELVCKEWKRVLSDG 116 (499)
T ss_pred HhcccccHHHHHHHHHHhcch-hhhhHHHHHHHHHHHHhccc
Confidence 4699 9999999999995 89999999999999987654
No 70
>PLN03150 hypothetical protein; Provisional
Probab=95.43 E-value=0.05 Score=52.55 Aligned_cols=108 Identities=19% Similarity=0.130 Sum_probs=69.1
Q ss_pred CCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcCCCCCEEEecCCCCCChHHHHHHHHhCCCC
Q 015721 177 NLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSCSSLKTLKLLDCYKVGDKSILSLAKFCKNL 256 (402)
Q Consensus 177 ~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L 256 (402)
.++.|++.++ .+.. .++..+..+++|+.|+++++..... ++.....+++|+.|+++++.... .++.....+++|
T Consensus 419 ~v~~L~L~~n-~L~g-~ip~~i~~L~~L~~L~Ls~N~l~g~--iP~~~~~l~~L~~LdLs~N~lsg--~iP~~l~~L~~L 492 (623)
T PLN03150 419 FIDGLGLDNQ-GLRG-FIPNDISKLRHLQSINLSGNSIRGN--IPPSLGSITSLEVLDLSYNSFNG--SIPESLGQLTSL 492 (623)
T ss_pred EEEEEECCCC-Cccc-cCCHHHhCCCCCCEEECCCCcccCc--CChHHhCCCCCCEEECCCCCCCC--CCchHHhcCCCC
Confidence 4788888874 3332 2445577889999999998644332 45556688999999999864332 134445568999
Q ss_pred cEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCC
Q 015721 257 ETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCL 292 (402)
Q Consensus 257 ~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~ 292 (402)
+.|+++++. +.......+... ..++..+++.++.
T Consensus 493 ~~L~Ls~N~-l~g~iP~~l~~~-~~~~~~l~~~~N~ 526 (623)
T PLN03150 493 RILNLNGNS-LSGRVPAALGGR-LLHRASFNFTDNA 526 (623)
T ss_pred CEEECcCCc-ccccCChHHhhc-cccCceEEecCCc
Confidence 999998763 332222222111 2456778777653
No 71
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=95.40 E-value=0.017 Score=52.53 Aligned_cols=173 Identities=24% Similarity=0.290 Sum_probs=76.7
Q ss_pred CccCcEEecCCCccCChHHHHHHHHhCC-CCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCCCCCCCcccHHHHHhcC
Q 015721 149 CQDLRSLHLAGCKSVTDGTLQALSKNCR-NLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNKCSNIGDNGISSVSKSC 227 (402)
Q Consensus 149 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 227 (402)
.+.++.|.+.+... .+ ++......+ +|+.|++++ ..+.. ++..+..+++|+.|+++.+. +.+ ++......
T Consensus 115 ~~~l~~L~l~~n~i-~~--i~~~~~~~~~nL~~L~l~~-N~i~~--l~~~~~~l~~L~~L~l~~N~-l~~--l~~~~~~~ 185 (394)
T COG4886 115 LTNLTSLDLDNNNI-TD--IPPLIGLLKSNLKELDLSD-NKIES--LPSPLRNLPNLKNLDLSFND-LSD--LPKLLSNL 185 (394)
T ss_pred ccceeEEecCCccc-cc--Cccccccchhhcccccccc-cchhh--hhhhhhccccccccccCCch-hhh--hhhhhhhh
Confidence 45677777766422 11 222222232 677777766 33332 22345566777777776633 222 22222245
Q ss_pred CCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCC-hHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcC
Q 015721 228 SSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDIS-DESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQC 306 (402)
Q Consensus 228 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~ 306 (402)
+.|+.|.++++. +.. ++........|++|.+++..... ...+..+ .++..+.+.+.. +. .+...+..+
T Consensus 186 ~~L~~L~ls~N~-i~~--l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~-----~~l~~l~l~~n~-~~--~~~~~~~~l 254 (394)
T COG4886 186 SNLNNLDLSGNK-ISD--LPPEIELLSALEELDLSNNSIIELLSSLSNL-----KNLSGLELSNNK-LE--DLPESIGNL 254 (394)
T ss_pred hhhhheeccCCc-ccc--CchhhhhhhhhhhhhhcCCcceecchhhhhc-----ccccccccCCce-ee--eccchhccc
Confidence 666777776642 221 12221223346666665542111 1112222 344444443331 11 112335556
Q ss_pred CCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCC
Q 015721 307 RNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKV 345 (402)
Q Consensus 307 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 345 (402)
++++.|+++++. +++... + ....+++.|+++.+.+
T Consensus 255 ~~l~~L~~s~n~-i~~i~~--~-~~~~~l~~L~~s~n~~ 289 (394)
T COG4886 255 SNLETLDLSNNQ-ISSISS--L-GSLTNLRELDLSGNSL 289 (394)
T ss_pred cccceecccccc-cccccc--c-cccCccCEEeccCccc
Confidence 666666666532 322111 2 2222666666644433
No 72
>PF13013 F-box-like_2: F-box-like domain
Probab=93.82 E-value=0.077 Score=37.60 Aligned_cols=28 Identities=18% Similarity=0.107 Sum_probs=25.2
Q ss_pred ccCCHHHHHHHHccCCCcchhhHHHHhhH
Q 015721 8 EVLRDDELRSILSRLEDDKDKERFGLVCK 36 (402)
Q Consensus 8 ~~LP~eil~~If~~L~~~~~~~~~~~vcr 36 (402)
.+||+||+..||++... .+...+..+|+
T Consensus 23 ~DLP~ELl~~I~~~C~~-~~l~~l~~~~~ 50 (109)
T PF13013_consen 23 LDLPWELLQLIFDYCND-PILLALSRTCR 50 (109)
T ss_pred hhChHHHHHHHHhhcCc-HHHHHHHHHHH
Confidence 35999999999999994 89989999987
No 73
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.37 E-value=0.051 Score=50.20 Aligned_cols=110 Identities=27% Similarity=0.338 Sum_probs=64.8
Q ss_pred CCCCCEEEecCCCCCChHHHHH---HHHhCCC-CcEEEecCCCCCChHHHHHHHHHh---cCCCcEEEccCCCCCChH--
Q 015721 227 CSSLKTLKLLDCYKVGDKSILS---LAKFCKN-LETLIIGGCRDISDESIKHLAASC---KSSLKNLRMDWCLNISDS-- 297 (402)
Q Consensus 227 ~~~L~~L~l~~~~~~~~~~~~~---~~~~~~~-L~~L~l~~~~~~~~~~~~~l~~~~---~~~L~~L~l~~~~~~~~~-- 297 (402)
..++++|++.+|. ++...... .....+. +..|++..+ .+.+..+..+.... ...+++++++.+ .+++.
T Consensus 203 ~~~le~L~L~~~~-~t~~~c~~l~~~l~~~~~~~~el~l~~n-~l~d~g~~~L~~~l~~~~~~l~~l~l~~n-si~~~~~ 279 (478)
T KOG4308|consen 203 LSSLETLKLSRCG-VTSSSCALLDEVLASGESLLRELDLASN-KLGDVGVEKLLPCLSVLSETLRVLDLSRN-SITEKGV 279 (478)
T ss_pred cccHHHHhhhhcC-cChHHHHHHHHHHhccchhhHHHHHHhc-CcchHHHHHHHHHhcccchhhhhhhhhcC-Cccccch
Confidence 4567788887753 33332222 2222344 555777553 56666666665433 145688888877 34432
Q ss_pred -HHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccC---CCcEEEE
Q 015721 298 -SLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVEL---SLKVLKV 340 (402)
Q Consensus 298 -~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~---~L~~L~l 340 (402)
.+...+..++.++.+.+.. +.+++........... .+..+.+
T Consensus 280 ~~L~~~l~~~~~l~~l~l~~-n~l~~~~~~~~~~~l~~~~~~~~~~l 325 (478)
T KOG4308|consen 280 RDLAEVLVSCRQLEELSLSN-NPLTDYGVELLLEALERKTPLLHLVL 325 (478)
T ss_pred HHHHHHHhhhHHHHHhhccc-CccccHHHHHHHHHhhhcccchhhhc
Confidence 3556677888999999987 4566666555544322 4555555
No 74
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.32 E-value=0.53 Score=43.67 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=32.6
Q ss_pred cCCCcEEEEeCCCCCHHHHHHHH----HhCCCCCEEeccCCCCCC--HhHHHhhccCCCCcceEeccccccCCc
Q 015721 332 ELSLKVLKVNCPKVTVVGIGNVL----EKCASLEYIDVRSCPHVT--QASCEEAGLQFPQCCKVNFAGCLFEPD 399 (402)
Q Consensus 332 ~~~L~~L~l~~~~~~~~~l~~~~----~~~~~L~~L~l~~c~~~~--~~~~~~~~~~~p~l~~l~~~~~~~~~~ 399 (402)
.+.++.+++..|...+.+...+. .+. .++.+.++..+.-. ++-..+-...-+.+..+..++|...++
T Consensus 403 ~~~l~~~~l~~n~~~~~~~~~l~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (478)
T KOG4308|consen 403 NEKLEILDLSLNSLHDEGAEVLTEQLSRNG-SLKALRLSRNPITALGTEELQRALALNPGILAIRLRGNVIGRA 475 (478)
T ss_pred cchhhhhhhhcCccchhhHHHHHHhhhhcc-cchhhhhccChhhhcchHHHHHHHhcCCCcceeecccCccccc
Confidence 34666666644444333333222 234 77777777644321 122222233345555666666655444
No 75
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=93.26 E-value=0.059 Score=42.56 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=73.7
Q ss_pred CCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCC
Q 015721 281 SSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASL 360 (402)
Q Consensus 281 ~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L 360 (402)
.+...++++.+.... ...+.++++|.+|.+.++ .++.. -+.+....|+|+.|.+..|++...+--.-+..||.|
T Consensus 42 d~~d~iDLtdNdl~~----l~~lp~l~rL~tLll~nN-rIt~I-~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L 115 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRK----LDNLPHLPRLHTLLLNNN-RITRI-DPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKL 115 (233)
T ss_pred cccceecccccchhh----cccCCCccccceEEecCC-cceee-ccchhhhccccceEEecCcchhhhhhcchhccCCcc
Confidence 566677776652221 223678889999999874 44432 344666677999999977777654433344689999
Q ss_pred CEEeccCCCCCCHhHH-HhhccCCCCcceEeccccc
Q 015721 361 EYIDVRSCPHVTQASC-EEAGLQFPQCCKVNFAGCL 395 (402)
Q Consensus 361 ~~L~l~~c~~~~~~~~-~~~~~~~p~l~~l~~~~~~ 395 (402)
+.|.+.++|--..+.. ..+.-.+|++..+++++-.
T Consensus 116 ~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt 151 (233)
T KOG1644|consen 116 EYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVT 151 (233)
T ss_pred ceeeecCCchhcccCceeEEEEecCcceEeehhhhh
Confidence 9999999775444333 3345578999999988643
No 76
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=92.99 E-value=0.12 Score=25.28 Aligned_cols=23 Identities=35% Similarity=0.468 Sum_probs=11.0
Q ss_pred CCCCcEEeccCCCCCChHHHHHHH
Q 015721 306 CRNLEALDIGCCEEVTDAAFQDLG 329 (402)
Q Consensus 306 ~~~L~~L~l~~~~~~~~~~~~~~~ 329 (402)
+++|++|++++|. +++.++..++
T Consensus 1 ~~~L~~L~l~~n~-i~~~g~~~l~ 23 (24)
T PF13516_consen 1 NPNLETLDLSNNQ-ITDEGASALA 23 (24)
T ss_dssp -TT-SEEE-TSSB-EHHHHHHHHH
T ss_pred CCCCCEEEccCCc-CCHHHHHHhC
Confidence 3556666666544 5555555443
No 77
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=92.28 E-value=0.054 Score=39.96 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=25.0
Q ss_pred cCccCcEEecCCCccCChHHHHHHHHhCCCCcEEecCCCCCCchHHHHHHHhcCCCCCEEccCC
Q 015721 148 GCQDLRSLHLAGCKSVTDGTLQALSKNCRNLEELGLLGCTSISDSGVIDLVNGCQNIKFLDLNK 211 (402)
Q Consensus 148 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 211 (402)
...+|+..+++++ ......+.+...+|.++.|++.+ +.+.+ ++.-+..+|.|+.|+++.
T Consensus 51 ~~~el~~i~ls~N--~fk~fp~kft~kf~t~t~lNl~~-neisd--vPeE~Aam~aLr~lNl~~ 109 (177)
T KOG4579|consen 51 KGYELTKISLSDN--GFKKFPKKFTIKFPTATTLNLAN-NEISD--VPEELAAMPALRSLNLRF 109 (177)
T ss_pred CCceEEEEecccc--hhhhCCHHHhhccchhhhhhcch-hhhhh--chHHHhhhHHhhhccccc
Confidence 3444555555542 11122223333344555555554 23322 222344455555555554
No 78
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=91.74 E-value=0.0085 Score=54.61 Aligned_cols=62 Identities=18% Similarity=0.265 Sum_probs=29.3
Q ss_pred HhcCCCCcEEeccCCCCCChHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCC
Q 015721 303 LSQCRNLEALDIGCCEEVTDAAFQDLGEVELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPH 370 (402)
Q Consensus 303 l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~ 370 (402)
+..+.+|+.|.+..+... ...+++. .. .|..|+++||++....+. +.++..|+.|.+.++|-
T Consensus 185 l~~l~slr~l~vrRn~l~--~lp~El~-~L-pLi~lDfScNkis~iPv~--fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 185 LGYLTSLRDLNVRRNHLE--DLPEELC-SL-PLIRLDFSCNKISYLPVD--FRKMRHLQVLQLENNPL 246 (722)
T ss_pred hhhHHHHHHHHHhhhhhh--hCCHHHh-CC-ceeeeecccCceeecchh--hhhhhhheeeeeccCCC
Confidence 444455555555542221 1122232 22 455555566666554332 33556666666655543
No 79
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=90.36 E-value=0.11 Score=38.32 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=51.0
Q ss_pred CCcEEEecCCCCC-ChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHhccC
Q 015721 255 NLETLIIGGCRDI-SDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGEVEL 333 (402)
Q Consensus 255 ~L~~L~l~~~~~~-~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 333 (402)
.+..+++++|.-. -...+..+... ..|+..+++++. +.+ .-..+...+|.++.|++.+ +++.+...+ ++ .++
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~--~el~~i~ls~N~-fk~-fp~kft~kf~t~t~lNl~~-neisdvPeE-~A-am~ 100 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKG--YELTKISLSDNG-FKK-FPKKFTIKFPTATTLNLAN-NEISDVPEE-LA-AMP 100 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCC--ceEEEEecccch-hhh-CCHHHhhccchhhhhhcch-hhhhhchHH-Hh-hhH
Confidence 4556777776422 12222233211 456666776652 220 1123344556778888876 445443333 33 344
Q ss_pred CCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccC
Q 015721 334 SLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRS 367 (402)
Q Consensus 334 ~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~ 367 (402)
.|+.|++..|.+... ...+..+.+|-.|+..+
T Consensus 101 aLr~lNl~~N~l~~~--p~vi~~L~~l~~Lds~~ 132 (177)
T KOG4579|consen 101 ALRSLNLRFNPLNAE--PRVIAPLIKLDMLDSPE 132 (177)
T ss_pred HhhhcccccCccccc--hHHHHHHHhHHHhcCCC
Confidence 888888866666542 11222244555554444
No 80
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=88.52 E-value=0.15 Score=46.77 Aligned_cols=108 Identities=25% Similarity=0.244 Sum_probs=66.0
Q ss_pred cCCCCCEEEecCCCCCChHHHHHHHHhCCCCcEEEecCCCCCChHHHHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhc
Q 015721 226 SCSSLKTLKLLDCYKVGDKSILSLAKFCKNLETLIIGGCRDISDESIKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQ 305 (402)
Q Consensus 226 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~ 305 (402)
.+.+|+.+.+.++. +. .+......+++|+.|++++..-..-..+..+ ..|+.|+++++ .++ .+.. +..
T Consensus 93 ~~~~l~~l~l~~n~-i~--~i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l-----~~L~~L~l~~N-~i~--~~~~-~~~ 160 (414)
T KOG0531|consen 93 KLKSLEALDLYDNK-IE--KIENLLSSLVNLQVLDLSFNKITKLEGLSTL-----TLLKELNLSGN-LIS--DISG-LES 160 (414)
T ss_pred cccceeeeeccccc-hh--hcccchhhhhcchheeccccccccccchhhc-----cchhhheeccC-cch--hccC-Ccc
Confidence 46778888887643 22 2223244578999999988644444455555 56899999887 333 2222 445
Q ss_pred CCCCcEEeccCCCCCChHHHHHH-HhccCCCcEEEEeCCCCCHH
Q 015721 306 CRNLEALDIGCCEEVTDAAFQDL-GEVELSLKVLKVNCPKVTVV 348 (402)
Q Consensus 306 ~~~L~~L~l~~~~~~~~~~~~~~-~~~~~~L~~L~l~~~~~~~~ 348 (402)
+++|+.++++++... . +... ...+.+++.+++..+.+...
T Consensus 161 l~~L~~l~l~~n~i~-~--ie~~~~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 161 LKSLKLLDLSYNRIV-D--IENDELSELISLEELDLGGNSIREI 201 (414)
T ss_pred chhhhcccCCcchhh-h--hhhhhhhhccchHHHhccCCchhcc
Confidence 788888888874432 2 2221 23344888888866666543
No 81
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=87.77 E-value=0.0084 Score=54.64 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=14.3
Q ss_pred CCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccC
Q 015721 282 SLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGC 316 (402)
Q Consensus 282 ~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~ 316 (402)
.|..|+++.+ +++ .++.-+..++.|++|.+.+
T Consensus 212 pLi~lDfScN-kis--~iPv~fr~m~~Lq~l~Len 243 (722)
T KOG0532|consen 212 PLIRLDFSCN-KIS--YLPVDFRKMRHLQVLQLEN 243 (722)
T ss_pred ceeeeecccC-cee--ecchhhhhhhhheeeeecc
Confidence 3444444433 333 2333344555555555554
No 82
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=86.80 E-value=0.28 Score=46.17 Aligned_cols=39 Identities=26% Similarity=0.407 Sum_probs=33.9
Q ss_pred ccccCCHHHHHHHHccCCCcchhhHHHHhhHHHHHhhhhc
Q 015721 6 INEVLRDDELRSILSRLEDDKDKERFGLVCKRWLHLQSTE 45 (402)
Q Consensus 6 ~~~~LP~eil~~If~~L~~~~~~~~~~~vcr~W~~~~~~~ 45 (402)
....||.|+..+||.||+ .+++.++++||+.|+.+....
T Consensus 107 fi~~lp~el~~~il~~Ld-~~~l~~~~~v~~~w~~~~~~~ 145 (537)
T KOG0274|consen 107 FLSLLPSELSLHILSFLD-GRDLLAVRQVCRNWNKLLDDD 145 (537)
T ss_pred hhhcccchhcccccccCC-HHHhhhhhhhcchhhhhhhcc
Confidence 344699999999999999 599999999999999886544
No 83
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=86.50 E-value=1.5 Score=40.48 Aligned_cols=87 Identities=22% Similarity=0.221 Sum_probs=40.8
Q ss_pred HhhCCCCCEEEccCCCCCChhHHHHHHhcCCCCCeEecCCCCCc--ChHHHHHHHhcCccCcEEecCCCccCC-----hH
Q 015721 94 ADGFKSLKLLNLQNCKGITDAGIASIGSGLCSLQSLDLSYCRKL--TDKGLSAVAEGCQDLRSLHLAGCKSVT-----DG 166 (402)
Q Consensus 94 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~~~~~~L~~L~l~~~~~~~-----~~ 166 (402)
....|.+..+.+++..-..-..+..+++..|+|+.|+|++++.. ....+.+. +...|++|-+.+++... ..
T Consensus 214 ~~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~--k~l~Leel~l~GNPlc~tf~~~s~ 291 (585)
T KOG3763|consen 214 EENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKL--KGLPLEELVLEGNPLCTTFSDRSE 291 (585)
T ss_pred hcCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhh--cCCCHHHeeecCCccccchhhhHH
Confidence 34455666666665432333344555555666666666665211 11111111 23446666666544322 12
Q ss_pred HHHHHHHhCCCCcEEe
Q 015721 167 TLQALSKNCRNLEELG 182 (402)
Q Consensus 167 ~~~~~~~~~~~L~~L~ 182 (402)
.+..+...+|+|..||
T Consensus 292 yv~~i~~~FPKL~~LD 307 (585)
T KOG3763|consen 292 YVSAIRELFPKLLRLD 307 (585)
T ss_pred HHHHHHHhcchheeec
Confidence 3344444555555554
No 84
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=85.66 E-value=0.24 Score=45.43 Aligned_cols=107 Identities=21% Similarity=0.206 Sum_probs=67.1
Q ss_pred hCCCCcEEEecCCCCCChHH-HHHHHHHhcCCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCCCCCChHHHHHHHh
Q 015721 252 FCKNLETLIIGGCRDISDES-IKHLAASCKSSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCCEEVTDAAFQDLGE 330 (402)
Q Consensus 252 ~~~~L~~L~l~~~~~~~~~~-~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~ 330 (402)
.+.+|+.|++.+........ +..+ ++|++|+++++ .++ .+.. +..++.|+.|++.++..-+-..+..
T Consensus 93 ~~~~l~~l~l~~n~i~~i~~~l~~~-----~~L~~L~ls~N-~I~--~i~~-l~~l~~L~~L~l~~N~i~~~~~~~~--- 160 (414)
T KOG0531|consen 93 KLKSLEALDLYDNKIEKIENLLSSL-----VNLQVLDLSFN-KIT--KLEG-LSTLTLLKELNLSGNLISDISGLES--- 160 (414)
T ss_pred cccceeeeeccccchhhcccchhhh-----hcchheecccc-ccc--cccc-hhhccchhhheeccCcchhccCCcc---
Confidence 36788888887643222222 2222 89999999887 444 2333 5566779999999855322222222
Q ss_pred ccCCCcEEEEeCCCCCHHHHHHHHHhCCCCCEEeccCCCCCC
Q 015721 331 VELSLKVLKVNCPKVTVVGIGNVLEKCASLEYIDVRSCPHVT 372 (402)
Q Consensus 331 ~~~~L~~L~l~~~~~~~~~l~~~~~~~~~L~~L~l~~c~~~~ 372 (402)
.++|+.++++.+.++...-.. +..+.+++.+.+.++....
T Consensus 161 -l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 161 -LKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE 200 (414)
T ss_pred -chhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc
Confidence 448888888777776644311 4678899999998865443
No 85
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=84.73 E-value=1.1 Score=41.25 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=21.6
Q ss_pred CCCcEEEccCCCCCChHHHHHHHhcCCCCcEEeccCC
Q 015721 281 SSLKNLRMDWCLNISDSSLSCILSQCRNLEALDIGCC 317 (402)
Q Consensus 281 ~~L~~L~l~~~~~~~~~~l~~~l~~~~~L~~L~l~~~ 317 (402)
+.+..++++++.-..-+.+..+....|+|+.|+|+++
T Consensus 218 p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 218 PEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred cceeeeecccchhhchhhhhHHHHhcchhheeecccc
Confidence 5666666666543333345555566666666666654
No 86
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=81.98 E-value=2.6 Score=21.44 Aligned_cols=18 Identities=50% Similarity=0.673 Sum_probs=7.7
Q ss_pred CCCeEecCCCCCcChHHHH
Q 015721 125 SLQSLDLSYCRKLTDKGLS 143 (402)
Q Consensus 125 ~L~~L~l~~~~~~~~~~~~ 143 (402)
+|++|+++++. +.+.+..
T Consensus 3 ~L~~LdL~~N~-i~~~G~~ 20 (28)
T smart00368 3 SLRELDLSNNK-LGDEGAR 20 (28)
T ss_pred ccCEEECCCCC-CCHHHHH
Confidence 34444444433 4444433
No 87
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=81.66 E-value=1.2 Score=19.65 Aligned_cols=12 Identities=17% Similarity=0.307 Sum_probs=7.3
Q ss_pred CCCCEEeccCCC
Q 015721 358 ASLEYIDVRSCP 369 (402)
Q Consensus 358 ~~L~~L~l~~c~ 369 (402)
++|+.|++++|.
T Consensus 1 ~~L~~L~l~~n~ 12 (17)
T PF13504_consen 1 PNLRTLDLSNNR 12 (17)
T ss_dssp TT-SEEEETSS-
T ss_pred CccCEEECCCCC
Confidence 467777777775
No 88
>PF07723 LRR_2: Leucine Rich Repeat; InterPro: IPR013101 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This entry includes some LRRs that fail to be detected by IPR001611 from INTERPRO [, ].
Probab=71.44 E-value=3.7 Score=20.48 Aligned_cols=10 Identities=50% Similarity=0.760 Sum_probs=4.2
Q ss_pred HHHHHHhcCC
Q 015721 298 SLSCILSQCR 307 (402)
Q Consensus 298 ~l~~~l~~~~ 307 (402)
.+..++..||
T Consensus 17 ~l~~LlS~CP 26 (26)
T PF07723_consen 17 SLERLLSGCP 26 (26)
T ss_pred HHHHhhccCc
Confidence 3444444443
No 89
>KOG3926 consensus F-box proteins [Amino acid transport and metabolism]
Probab=70.02 E-value=5.4 Score=33.21 Aligned_cols=33 Identities=24% Similarity=0.175 Sum_probs=28.0
Q ss_pred ccccccCCHHHHHHHHccCCCcchhhHHHHhhH
Q 015721 4 LCINEVLRDDELRSILSRLEDDKDKERFGLVCK 36 (402)
Q Consensus 4 ~~~~~~LP~eil~~If~~L~~~~~~~~~~~vcr 36 (402)
+.-+.+||.|++..|+..+++.+|+..+++|--
T Consensus 199 ~ltl~dLP~e~vl~Il~rlsDh~dL~s~aqa~e 231 (332)
T KOG3926|consen 199 GLTLHDLPLECVLNILLRLSDHRDLESLAQAWE 231 (332)
T ss_pred CCCcccchHHHHHHHHHHccCcchHHHHHHhhH
Confidence 344667999999999999999999999988743
No 90
>PF03382 DUF285: Mycoplasma protein of unknown function, DUF285; InterPro: IPR005046 This is a family proteins of unknown function. Many contain a tandem peptide repeat sequence of 25 or 26 residues, found in predicted surface proteins (often lipoproteins) from Listeria monocytogenes, Listeria innocua, Enterococcus faecalis (Streptococcus faecalis), Lactobacillus plantarum, Mycoplasma mycoides, Helicobacter hepaticus, and other species.
Probab=62.06 E-value=6.7 Score=28.66 Aligned_cols=10 Identities=30% Similarity=0.753 Sum_probs=4.1
Q ss_pred HHhcCccCcE
Q 015721 145 VAEGCQDLRS 154 (402)
Q Consensus 145 ~~~~~~~L~~ 154 (402)
+..++++|..
T Consensus 56 mF~~~~~l~~ 65 (120)
T PF03382_consen 56 MFAGCSSLNQ 65 (120)
T ss_pred HHhhhhhcCC
Confidence 3334444444
No 91
>PF03382 DUF285: Mycoplasma protein of unknown function, DUF285; InterPro: IPR005046 This is a family proteins of unknown function. Many contain a tandem peptide repeat sequence of 25 or 26 residues, found in predicted surface proteins (often lipoproteins) from Listeria monocytogenes, Listeria innocua, Enterococcus faecalis (Streptococcus faecalis), Lactobacillus plantarum, Mycoplasma mycoides, Helicobacter hepaticus, and other species.
Probab=57.56 E-value=9.2 Score=27.92 Aligned_cols=16 Identities=19% Similarity=0.507 Sum_probs=7.3
Q ss_pred HHHHHHhCCCCcEEecC
Q 015721 168 LQALSKNCRNLEELGLL 184 (402)
Q Consensus 168 ~~~~~~~~~~L~~L~l~ 184 (402)
+..++..++.|.. +++
T Consensus 53 m~~mF~~~~~l~~-dls 68 (120)
T PF03382_consen 53 MSGMFAGCSSLNQ-DLS 68 (120)
T ss_pred HHHHHhhhhhcCC-Ccc
Confidence 3344444555554 443
No 92
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=46.33 E-value=11 Score=17.63 Aligned_cols=13 Identities=38% Similarity=0.756 Sum_probs=9.0
Q ss_pred CCCEEeccCCCCCC
Q 015721 359 SLEYIDVRSCPHVT 372 (402)
Q Consensus 359 ~L~~L~l~~c~~~~ 372 (402)
+|+.|++++| .++
T Consensus 1 ~L~~Ldls~n-~l~ 13 (22)
T PF00560_consen 1 NLEYLDLSGN-NLT 13 (22)
T ss_dssp TESEEEETSS-EES
T ss_pred CccEEECCCC-cCE
Confidence 4778888887 444
No 93
>PF07735 FBA_2: F-box associated; InterPro: IPR012885 This domain is found is found towards the C terminus of proteins that contain an F-box, IPR001810 from INTERPRO, suggesting that they are effectors linked with ubiquitination.
Probab=35.72 E-value=1.2e+02 Score=19.28 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=12.8
Q ss_pred cEEEEeCCCCCHHHHHHHHH-----hCCCCCEEec
Q 015721 336 KVLKVNCPKVTVVGIGNVLE-----KCASLEYIDV 365 (402)
Q Consensus 336 ~~L~l~~~~~~~~~l~~~~~-----~~~~L~~L~l 365 (402)
+.+.+....++...+..++. ..|+|+.+.+
T Consensus 35 ~~i~l~~~~~t~~dln~Flk~W~~G~~~~Le~l~i 69 (70)
T PF07735_consen 35 KKIELWNSKFTNEDLNKFLKHWINGSNPRLEYLEI 69 (70)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHcCCCcCCcEEEE
Confidence 44444334444444433322 3455555543
No 94
>KOG2502 consensus Tub family proteins [General function prediction only]
Probab=32.65 E-value=28 Score=30.45 Aligned_cols=39 Identities=21% Similarity=0.420 Sum_probs=30.8
Q ss_pred ccccCCHHHHHHHHccCCCcc-------hhhHHHHhhHHHHHhhhh
Q 015721 6 INEVLRDDELRSILSRLEDDK-------DKERFGLVCKRWLHLQST 44 (402)
Q Consensus 6 ~~~~LP~eil~~If~~L~~~~-------~~~~~~~vcr~W~~~~~~ 44 (402)
.+..||.|.+..|+...+..+ ..+.++-||+.|+.....
T Consensus 44 ~~~~l~~~~L~d~~~r~eese~~wp~r~~vvs~~~~~~~~r~~~~~ 89 (355)
T KOG2502|consen 44 LWAALPPELLSDVLKRDEESEDTWPSRRNVVSCAGVCDKWREISKE 89 (355)
T ss_pred hhhcCCHhHHHHHhhhccccccccccccccccccchhhhhhhhccc
Confidence 566899999999998886432 457788999999987543
No 95
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=31.93 E-value=40 Score=16.35 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=9.1
Q ss_pred CCCCCEEeccCC
Q 015721 357 CASLEYIDVRSC 368 (402)
Q Consensus 357 ~~~L~~L~l~~c 368 (402)
+++|+.|+++++
T Consensus 1 L~~L~~L~L~~N 12 (26)
T smart00370 1 LPNLRELDLSNN 12 (26)
T ss_pred CCCCCEEECCCC
Confidence 367888888875
No 96
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=31.93 E-value=40 Score=16.35 Aligned_cols=12 Identities=17% Similarity=0.268 Sum_probs=9.1
Q ss_pred CCCCCEEeccCC
Q 015721 357 CASLEYIDVRSC 368 (402)
Q Consensus 357 ~~~L~~L~l~~c 368 (402)
+++|+.|+++++
T Consensus 1 L~~L~~L~L~~N 12 (26)
T smart00369 1 LPNLRELDLSNN 12 (26)
T ss_pred CCCCCEEECCCC
Confidence 367888888875
No 97
>KOG3735 consensus Tropomodulin and leiomodulin [Cytoskeleton]
Probab=30.08 E-value=1.4e+02 Score=26.34 Aligned_cols=26 Identities=15% Similarity=0.312 Sum_probs=12.5
Q ss_pred HHhcCCCCCEEccCCCCCCCcccHHHH
Q 015721 197 LVNGCQNIKFLDLNKCSNIGDNGISSV 223 (402)
Q Consensus 197 ~~~~~~~L~~L~l~~~~~~~~~~~~~~ 223 (402)
++.-++.|++|.+++ ++++..++..+
T Consensus 250 ml~~n~sl~slnves-nFItg~gi~a~ 275 (353)
T KOG3735|consen 250 MLKENKSLTSLNVES-NFITGLGIMAL 275 (353)
T ss_pred HHhhcchhhheeccc-cccccHHHHHH
Confidence 344445555555555 34444444433
No 98
>KOG3735 consensus Tropomodulin and leiomodulin [Cytoskeleton]
Probab=26.24 E-value=2.2e+02 Score=25.22 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=61.0
Q ss_pred HHHHHHHHhcCCCcEEEccCCCCCChHHHHHH---HhcCCCCcEEeccCCCCCChH---HHHHHHhccCCCcEEEEeCCC
Q 015721 271 SIKHLAASCKSSLKNLRMDWCLNISDSSLSCI---LSQCRNLEALDIGCCEEVTDA---AFQDLGEVELSLKVLKVNCPK 344 (402)
Q Consensus 271 ~~~~l~~~~~~~L~~L~l~~~~~~~~~~l~~~---l~~~~~L~~L~l~~~~~~~~~---~~~~~~~~~~~L~~L~l~~~~ 344 (402)
.+..+ ..+-+.++.+++.+...+...-+..+ +..-...+.+.+.+ ...++. .+..+...+..|++|++..|.
T Consensus 189 ~leri-~~nd~~l~evnlnn~~~ip~e~lk~~~eal~~nt~vk~Fsla~-tr~~d~vA~a~a~ml~~n~sl~slnvesnF 266 (353)
T KOG3735|consen 189 SLERI-KENDTGLTEVNLNNIRRIPIETLKQFSEALKNNTHVKKFSLAN-TRSSDPVAFAIAEMLKENKSLTSLNVESNF 266 (353)
T ss_pred HHHHH-hcCCCCceeeeccccccCCHHHHHHHHHHHhcCchhhhhhhhc-ccCCchhHHHHHHHHhhcchhhheeccccc
Confidence 34444 44458899999988877775544433 44555677777765 222222 334455566699999998899
Q ss_pred CCHHHHHHHHHhCC---CCCEEeccC
Q 015721 345 VTVVGIGNVLEKCA---SLEYIDVRS 367 (402)
Q Consensus 345 ~~~~~l~~~~~~~~---~L~~L~l~~ 367 (402)
|+..++..+++.+. +|..+.+.+
T Consensus 267 Itg~gi~a~~~al~~n~tl~el~~dn 292 (353)
T KOG3735|consen 267 ITGLGIMALLRALQSNKSLTELKNDN 292 (353)
T ss_pred cccHHHHHHHHHHhccchhhHhhhhh
Confidence 99988877666554 455555544
No 99
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=25.63 E-value=58 Score=16.25 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=6.9
Q ss_pred CCcEEEEeCCCCC
Q 015721 334 SLKVLKVNCPKVT 346 (402)
Q Consensus 334 ~L~~L~l~~~~~~ 346 (402)
+|+.|+++.|.++
T Consensus 3 ~L~~L~L~~NkI~ 15 (26)
T smart00365 3 NLEELDLSQNKIK 15 (26)
T ss_pred ccCEEECCCCccc
Confidence 4555555555543
No 100
>smart00446 LRRcap occurring C-terminal to leucine-rich repeats. A motif occurring C-terminal to leucine-rich repeats in "sds22-like" and "typical" LRR-containing proteins.
Probab=21.44 E-value=88 Score=15.70 Aligned_cols=16 Identities=19% Similarity=0.306 Sum_probs=11.3
Q ss_pred HHHHhCCCCCEEeccC
Q 015721 352 NVLEKCASLEYIDVRS 367 (402)
Q Consensus 352 ~~~~~~~~L~~L~l~~ 367 (402)
..+..+|+|+.|+...
T Consensus 7 ~Vi~~LPqL~~LD~~~ 22 (26)
T smart00446 7 KVIRLLPQLRKLDXXX 22 (26)
T ss_pred HHHHHCCccceecccc
Confidence 3456788888887654
Done!