Query 015724
Match_columns 402
No_of_seqs 178 out of 598
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 08:59:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015724.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015724hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4683 Uncharacterized conser 100.0 1.6E-85 3.6E-90 647.8 22.2 338 52-400 133-474 (549)
2 COG4299 Uncharacterized protei 100.0 3.2E-64 7E-69 482.0 17.2 272 58-400 3-278 (371)
3 PF07786 DUF1624: Protein of u 99.9 2.6E-21 5.7E-26 181.8 14.6 190 62-347 1-195 (223)
4 COG3503 Predicted membrane pro 99.5 2.6E-14 5.6E-19 140.3 8.1 120 61-192 14-138 (323)
5 COG2311 Predicted membrane pro 97.8 5E-05 1.1E-09 78.4 8.2 118 58-195 8-141 (394)
6 PF10129 OpgC_C: OpgC protein; 97.8 0.0012 2.6E-08 67.6 17.8 77 62-142 1-80 (358)
7 PF06423 GWT1: GWT1; InterPro 97.5 0.00058 1.3E-08 60.8 9.4 86 313-399 2-96 (136)
8 PF01757 Acyl_transf_3: Acyltr 97.0 0.029 6.3E-07 52.4 15.3 53 64-117 2-61 (340)
9 PRK10835 hypothetical protein; 97.0 0.0026 5.7E-08 65.2 8.8 99 66-187 1-116 (373)
10 PRK03854 opgC glucans biosynth 96.5 0.0036 7.8E-08 63.5 5.3 90 57-147 3-101 (375)
11 COG4645 Uncharacterized protei 95.8 0.063 1.4E-06 54.8 9.8 83 60-147 21-110 (410)
12 COG3274 Predicted O-acyltransf 89.1 1.2 2.5E-05 45.5 7.0 55 61-115 3-64 (332)
13 PF15345 TMEM51: Transmembrane 85.2 0.62 1.3E-05 45.2 2.5 50 350-399 9-80 (233)
14 COG1835 Predicted acyltransfer 75.8 0.74 1.6E-05 46.9 -0.5 69 56-128 8-76 (386)
15 COG3594 NolL Fucose 4-O-acetyl 66.8 6.2 0.00014 40.6 3.8 69 60-139 2-76 (343)
16 COG5062 Uncharacterized membra 63.7 16 0.00035 37.9 6.0 228 59-391 107-343 (429)
17 COG3619 Predicted membrane pro 49.7 1.4E+02 0.003 29.2 9.5 58 89-148 47-104 (226)
18 PRK05771 V-type ATP synthase s 44.7 60 0.0013 35.8 7.1 20 312-334 344-363 (646)
19 PF13828 DUF4190: Domain of un 38.7 57 0.0012 25.4 4.1 49 316-364 9-58 (62)
20 PF05857 TraX: TraX protein; 27.9 5.1E+02 0.011 24.2 9.9 103 65-188 2-104 (219)
21 TIGR02230 ATPase_gene1 F0F1-AT 27.3 1.9E+02 0.0042 24.7 5.9 25 315-339 42-68 (100)
22 cd08764 Cyt_b561_CG1275_like N 27.1 4.3E+02 0.0094 25.5 8.9 28 311-338 168-195 (214)
23 TIGR02005 PTS-IIBC-alpha PTS s 26.9 8.7E+02 0.019 26.6 13.9 23 263-285 216-240 (524)
24 PF07760 DUF1616: Protein of u 25.9 6.6E+02 0.014 24.9 13.1 78 103-193 29-110 (287)
25 KOG2532 Permease of the major 23.4 1.8E+02 0.004 31.0 6.2 73 314-389 295-370 (466)
26 PRK11089 PTS system glucose-sp 22.0 2.8E+02 0.006 30.0 7.2 77 263-355 196-288 (477)
27 PF11654 DUF2665: Protein of u 21.5 1.1E+02 0.0023 22.9 2.8 33 104-136 7-41 (47)
28 PF09877 DUF2104: Predicted me 21.0 4.1E+02 0.0088 22.9 6.5 60 324-393 9-71 (99)
29 PLN02810 carbon-monoxide oxyge 20.8 6.9E+02 0.015 24.6 9.0 28 311-338 189-216 (231)
No 1
>KOG4683 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.6e-85 Score=647.81 Aligned_cols=338 Identities=42% Similarity=0.758 Sum_probs=308.1
Q ss_pred HhHhhhhcccchhhhhhhhhhhhhheeeeeccCCccccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCChhHHHH
Q 015724 52 LQQLLQQKSKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK 131 (402)
Q Consensus 52 ~~~~~~~~~~Rl~SLD~~RGlti~lMIlvn~~g~~~~~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~~~~~ 131 (402)
+....++..+|+.|||+|||+|+++||+||+.|+.||.++||+|||+++||+|||+|+|||||||++|+++...|....+
T Consensus 133 ~~rsla~~r~RL~SLD~FRGltValMIlVdd~GG~~p~I~HapWnG~~LADfVmPfFLfIvGVsials~K~~s~rf~a~r 212 (549)
T KOG4683|consen 133 EARSLATQRKRLRSLDTFRGLTVALMILVDDGGGGYPWIEHAPWNGLHLADFVMPFFLFIVGVSIALSVKSQSSRFSATR 212 (549)
T ss_pred hhhhcCCCchhhhhhhhhcCceEEEEEEEecCCCCchhhhcCCcCCccHHHHHHHHHHHHHHhhhhhhhhhhhhhhhHhH
Confidence 44445566689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcccccccCccceehhhHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhhhhhHH
Q 015724 132 KIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQW 211 (402)
Q Consensus 132 ~il~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~~~~~~R~~GVLqrIgl~YlvaAll~l~~~~~~~~~~~~~~~~~~~~~~~ 211 (402)
|...|+.+|+++|++++++|.|.++++|++.|.+.+|++|||||+|++|+++|++++++.++.... ..|
T Consensus 213 Ka~~R~cklllwgLflqGgf~h~~~nLTygidve~lR~mGILQr~~~ayLVvAi~~~~~~~~~~~~-----------~S~ 281 (549)
T KOG4683|consen 213 KAKARICKLLLWGLFLQGGFLHSMSNLTYGIDVEQLRIMGILQRFGVAYLVVAILHTLCCRPISPQ-----------RSW 281 (549)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCcccccCCccHHHHHHHHHHHHhhHHHHHHHHHhhhccCCCccc-----------cch
Confidence 999999999999999999999999999999999999999999999999999999998887643211 124
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCccc---cCCCCcceeeeecCCCCCCCc-cccHhHHHhhhhcCcccccCCCccccc
Q 015724 212 QWIGGFIAFVIYIITTYSLYVPNWSFSE---HSDHGVKKYIVKCGMRGHLGP-ACNAVGYVDRELWGINHLYSDPVWSRL 287 (402)
Q Consensus 212 q~~v~~~lL~~y~~l~~~l~vP~~~~~~---~~~~~~~~~~~~cg~~g~l~~-~~n~ag~iDr~vlG~~HlY~~P~~~~~ 287 (402)
|-++....|.+|.+..++-+||+|.+-. ..|+-++.|.++||.+|...+ .||++||.||+++|++|||++|+|+|+
T Consensus 282 ~R~V~~~~L~~~~~~~~~~~V~~~~~~~~~~~~~~~~r~~~~~~G~~~~~~~P~CnAvGy~DrqvLGi~HiY~hP~~~r~ 361 (549)
T KOG4683|consen 282 QRAVHDVCLFSGELAVLLALVATYLGLTFGLRVPGCPRGYLGPGGKHDYNAHPKCNAVGYADRQVLGIAHIYQHPTAKRV 361 (549)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhhhceecccccCCCCcccccCCcccccCCCCCccchhhhHHhhhhhHHHhcCchHHHh
Confidence 5577777777787777777777774432 234446777778888888865 599999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCcCCCCCCCchhhhhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhhC
Q 015724 288 EACTLSSPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAIILHFT 367 (402)
Q Consensus 288 ~~c~~~~p~~g~~~~~~~~~~~~~fDPEGlLStlpAi~t~llG~~aG~~L~~~~~~~~rl~~~l~~G~~ll~lG~ll~~~ 367 (402)
++|+.++|++||++.|+|+||++|||||||||+|.|++++++|+++|+++.+.+++.+|+++|...++++.++|..+++.
T Consensus 362 k~cs~n~P~nG~l~~DAPSWCqapFdPEGilssi~avv~~llG~h~Ghiilh~k~~~sRir~wis~~~~l~llg~tL~~~ 441 (549)
T KOG4683|consen 362 KDCSINYPNNGPLPPDAPSWCQAPFDPEGILSSILAVVQVLLGAHAGHIILHHKNFQSRIRRWISLAILLGLLGGTLCGF 441 (549)
T ss_pred hhcccCCCCCCCCCCCCchhhcCCCChHHHHHHHHHHHHHHHHhhcCeEEEEccchHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcccccCCCchhHHHHHhHHHHHHHHHHHHhh
Q 015724 368 NAIPINKQLYSFSYVCFTAGAAGIVFSALYVLC 400 (402)
Q Consensus 368 ~~~PiNK~LWT~SfVL~T~G~a~llLa~~y~li 400 (402)
+.+|+||||||.||+|+|+|+|+++|+..|++|
T Consensus 442 s~~Plnk~L~slsfvCVT~~~A~Li~S~mY~~i 474 (549)
T KOG4683|consen 442 SAIPLNKNLWSLSFVCVTVSLALLILSLMYYFI 474 (549)
T ss_pred cccchhHhHHHhhhhHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999998
No 2
>COG4299 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=3.2e-64 Score=482.04 Aligned_cols=272 Identities=32% Similarity=0.452 Sum_probs=242.4
Q ss_pred hcccchhhhhhhhhhhhhheeeeeccCC---ccccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCChhHHHHHHH
Q 015724 58 QKSKRVATLDAFRGLTVVLMILVDDAGG---AYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKII 134 (402)
Q Consensus 58 ~~~~Rl~SLD~~RGlti~lMIlvn~~g~---~~~~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~~~~~~il 134 (402)
++..|+.|||+|||+|+++||+||+.|- .|+|+.||+|+|+|++|+|||+|+|++|+|||||++|..+.++..+++.
T Consensus 3 qpa~RltsLDvfRGlTv~lMilVN~ag~gd~~y~qL~HA~w~G~T~tDlVFP~FLF~vG~am~Fs~sk~~~~n~~tw~~~ 82 (371)
T COG4299 3 QPAFRLTSLDVFRGLTVLLMILVNNAGLGDSTYRQLSHAHWGGLTLTDLVFPWFLFCVGAAMPFSASKMNKANVTTWPLY 82 (371)
T ss_pred CchhhhhhHHHHhhhHHHHHHhhcccccccccccccccccccCCCHHHHHHHHHHHHHhhhccccccccCccCCcchHHH
Confidence 3447999999999999999999999863 8999999999999999999999999999999999999988888889999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCccccccc-CccceehhhHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhhhhhHHHH
Q 015724 135 FRTLKLLFWGIILQGGYSHAPDALSYGVD-MKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQWQW 213 (402)
Q Consensus 135 ~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~~-~~~~R~~GVLqrIgl~YlvaAll~l~~~~~~~~~~~~~~~~~~~~~~~q~ 213 (402)
||...+|++|.+++.+.... .|.++ .+.+|.+||||||++||+++|+....+++ |+||
T Consensus 83 RRaa~~f~Lg~Lm~~F~~~~----~ws~~~~s~tr~mGVLQrIaL~ylfAal~v~~L~~-----------------r~q~ 141 (371)
T COG4299 83 RRAAERFALGYLMGAFVTVR----DWSVTSHSLTRGMGVLQRIALAYLFAALLVRQLRG-----------------RWQA 141 (371)
T ss_pred HHHHHHHHHHHHhhhccccc----eeeeeechhhHHHHHHHHHHHHHHHHHHHHHhcCh-----------------HHHH
Confidence 99999999999998642111 12334 56799999999999999999999877764 5899
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCccccCCCCcceeeeecCCCCCCCccccHhHHHhhhhcCcccccCCCcccccccccCC
Q 015724 214 IGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACTLS 293 (402)
Q Consensus 214 ~v~~~lL~~y~~l~~~l~vP~~~~~~~~~~~~~~~~~~cg~~g~l~~~~n~ag~iDr~vlG~~HlY~~P~~~~~~~c~~~ 293 (402)
+.+++++++||+++...++|+.+ ++..+|+..++|+...+.||+|+.
T Consensus 142 ~laavLL~gYwl~lm~~p~P~~~---------------------l~~~Gn~g~~~d~l~i~~~hLy~~------------ 188 (371)
T COG4299 142 LLAAVLLAGYWLFLMFTPHPAAP---------------------LGGIGNVGESADPLQILNDHLYSA------------ 188 (371)
T ss_pred HHHHHHHHHHHHHHhhcCCCccc---------------------cccccccccccchhhhhhhhhhcc------------
Confidence 99999999999988777777643 445678899999999999999974
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCchhhhhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhhCCCcccc
Q 015724 294 SPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAIILHFTNAIPIN 373 (402)
Q Consensus 294 ~p~~g~~~~~~~~~~~~~fDPEGlLStlpAi~t~llG~~aG~~L~~~~~~~~rl~~~l~~G~~ll~lG~ll~~~~~~PiN 373 (402)
...|||||++||+|++++++.|+++++.++++..+.+....+.+.|++++++|+.|+. .+|||
T Consensus 189 ---------------dG~~dpeGLlstvPttv~VLaGylaar~l~~~p~~~ra~l~la~~Gvvl~~~G~gW~~--~fPi~ 251 (371)
T COG4299 189 ---------------DGGFDPEGLLSTVPTTVLVLAGYLAARPLQQKPGNPRAPLLLAGLGVVLTALGYGWAG--RFPIS 251 (371)
T ss_pred ---------------cCCCCchhhhhcchHHHHHHHHHHhhhHHhhCCCCCcchHHHHHHHHHHHHhcccccc--ccccc
Confidence 1348999999999999999999999999998877777788899999999999999985 79999
Q ss_pred cCCCchhHHHHHhHHHHHHHHHHHHhh
Q 015724 374 KQLYSFSYVCFTAGAAGIVFSALYVLC 400 (402)
Q Consensus 374 K~LWT~SfVL~T~G~a~llLa~~y~li 400 (402)
|+|||+|||++|+|++.+++++||.++
T Consensus 252 KkLWTssyvl~t~G~~llllaac~~l~ 278 (371)
T COG4299 252 KKLWTSSYVLYTAGLGLLLLAACWVLA 278 (371)
T ss_pred hhhcCCceeehhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999887
No 3
>PF07786 DUF1624: Protein of unknown function (DUF1624); InterPro: IPR012429 These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species. The region in question is approximately 230 residues long.
Probab=99.86 E-value=2.6e-21 Score=181.78 Aligned_cols=190 Identities=23% Similarity=0.312 Sum_probs=132.9
Q ss_pred chhhhhhhhhhhhhheeeeeccCC-cccc--cccc--CCCCCchhHHHHHHHHHHHHHHHHHhcccCCChhHHHHHHHHH
Q 015724 62 RVATLDAFRGLTVVLMILVDDAGG-AYAR--IDHS--PWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKIIFR 136 (402)
Q Consensus 62 Rl~SLD~~RGlti~lMIlvn~~g~-~~~~--l~Ha--~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~~~~~~il~R 136 (402)
|+.+||++||++|++|+++|...+ .+.. -.|. .+....+.|+++|.|+|++|+|++++.+|+.++ ++.+||
T Consensus 1 Ri~~lD~~RGlaii~Mi~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ap~F~fl~G~s~~l~~~~~~~~----~~~~~R 76 (223)
T PF07786_consen 1 RIPSLDALRGLAIIGMILVHFLFDLNYFGGWPQSWFGSFFWRFFRGLAAPLFLFLAGISLALSTGRRRRR----RKFLKR 76 (223)
T ss_pred CcHHHHHHHHHHHHhhhHhhCcChHhhcCccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHhcccccch----hHHHHH
Confidence 899999999999999999998754 2111 1122 234456889999999999999999999887766 788999
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccccccCccceehhhHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhhhhhHHHHHHH
Q 015724 137 TLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQWQWIGG 216 (402)
Q Consensus 137 sl~Lf~lGl~l~~~~~~~~~~~~~~~~~~~~R~~GVLqrIgl~YlvaAll~l~~~~~~~~~~~~~~~~~~~~~~~q~~v~ 216 (402)
+++|+++|++++.. ++....+...++||||+||+||++++++. ..++ +..++.+
T Consensus 77 ~~~l~~~g~~i~~~--------~~~~~~~~~i~~gIL~~ig~~~ll~~~~~-~~~~-----------------~~~~~~~ 130 (223)
T PF07786_consen 77 GLKLFLLGLLINLL--------TFFFFPEGFIYFGILQFIGLSMLLAALFL-RLPR-----------------RALLILA 130 (223)
T ss_pred HHHHHHHHHHHHHH--------HHHhcCCceeehhHHHHHHHHHHHHHHHH-hcch-----------------hHHHHHH
Confidence 99999999999764 12233455668899999999999988873 3332 2344445
Q ss_pred HHHHHHHHHHHhhcccCCCCccccCCCCcceeeeecCCCCCCCccccHhHHHhhhhcCcccccCCCcccccccccCCCCC
Q 015724 217 FIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACTLSSPN 296 (402)
Q Consensus 217 ~~lL~~y~~l~~~l~vP~~~~~~~~~~~~~~~~~~cg~~g~l~~~~n~ag~iDr~vlG~~HlY~~P~~~~~~~c~~~~p~ 296 (402)
++++++++.+... .. +. + +...+|. +
T Consensus 131 ~~~~~~~~~l~~~--~~-------------------------~~--~-----~~~~~~~---~----------------- 156 (223)
T PF07786_consen 131 LLLLALSWLLSGP--VF-------------------------GP--P-----WLLWLGL---S----------------- 156 (223)
T ss_pred HHHHHHHHHHhhh--hc-------------------------Cc--h-----HHHHhcc---c-----------------
Confidence 5555555543311 00 00 0 1111221 1
Q ss_pred CCCCCCCCCCCcCCCCCCCchhhhhHHHHHHHHHHHHHHHHhcccchhHHH
Q 015724 297 SGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARL 347 (402)
Q Consensus 297 ~g~~~~~~~~~~~~~fDPEGlLStlpAi~t~llG~~aG~~L~~~~~~~~rl 347 (402)
...++++|....+|.++..++|+.+|++..+..+.+.+.
T Consensus 157 ------------~~~~~~~~~~Pl~PW~~~~l~G~~~G~~~~~~~~~~~~~ 195 (223)
T PF07786_consen 157 ------------SRNFFSNGYFPLFPWLGFFLLGMALGRLFLRKGRRRFRV 195 (223)
T ss_pred ------------ccCCCcCCcCccHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 024688899999999999999999999997664444343
No 4
>COG3503 Predicted membrane protein [Function unknown]
Probab=99.51 E-value=2.6e-14 Score=140.31 Aligned_cols=120 Identities=22% Similarity=0.301 Sum_probs=96.1
Q ss_pred cchhhhhhhhhhhhhheeeeeccCC-ccc-cccccCC-CCCc--hhHHHHHHHHHHHHHHHHHhcccCCChhHHHHHHHH
Q 015724 61 KRVATLDAFRGLTVVLMILVDDAGG-AYA-RIDHSPW-NGCT--LADFVMPFFLFIVGVAIALALKKVPKINGAVKKIIF 135 (402)
Q Consensus 61 ~Rl~SLD~~RGlti~lMIlvn~~g~-~~~-~l~Ha~W-~G~t--~aDlVfP~FlFivGvSi~lS~~~~~~k~~~~~~il~ 135 (402)
+|+.+||++||++|++|++.|...+ ++. +++-+.= .|.+ ++.++.|.|+|++|+|+.+|-.|..++ +++.+|
T Consensus 14 ~R~~~ID~LRGla~l~MalyHf~~dl~ffg~~dl~~ta~g~~r~~ar~~A~~FlFLaG~Sl~L~~~r~~~r---~~~l~k 90 (323)
T COG3503 14 NRLGEIDILRGLALLAMALYHFFWDLEFFGYMDLATTALGLWRYFARLIASSFLFLAGVSLSLSHSRGLRR---WRFLVK 90 (323)
T ss_pred cchhhhHHHhHHHHHHHHHHHHHhhhhhcCccccchhhhhHHHHHHHHHHHHHHHHHhhHheeeccccccc---hHHHHH
Confidence 8999999999999999999996655 221 2333322 2333 889999999999999999999887664 789999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcccccccCccceehhhHHHHHHHHHHHHHHHHHhcC
Q 015724 136 RTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTK 192 (402)
Q Consensus 136 Rsl~Lf~lGl~l~~~~~~~~~~~~~~~~~~~~R~~GVLqrIgl~YlvaAll~l~~~~ 192 (402)
|.++|..+++.+++. ||..-++++.++||||.||++.++.+.. +++++
T Consensus 91 RgL~l~~l~l~It~~--------Twf~~P~sfI~fgILh~igLa~ll~~~f-l~lP~ 138 (323)
T COG3503 91 RGLKLAALALAITAV--------TWFAFPDSFIFFGILHAIGLASLLGAAF-LWLPR 138 (323)
T ss_pred HHHHHHHHHHHHHHe--------eeEecCCceehHHHHHHHHHHHHHHHHH-HhCch
Confidence 999999999999876 5544458899999999999999987766 34443
No 5
>COG2311 Predicted membrane protein [Function unknown]
Probab=97.83 E-value=5e-05 Score=78.37 Aligned_cols=118 Identities=30% Similarity=0.448 Sum_probs=78.9
Q ss_pred hcccchhhhhhhhhhhhhheeeeeccCCccc----cccccCC-CCCc-----hhHH-----HHHHHHHHHHHHHHHhccc
Q 015724 58 QKSKRVATLDAFRGLTVVLMILVDDAGGAYA----RIDHSPW-NGCT-----LADF-----VMPFFLFIVGVAIALALKK 122 (402)
Q Consensus 58 ~~~~Rl~SLD~~RGlti~lMIlvn~~g~~~~----~l~Ha~W-~G~t-----~aDl-----VfP~FlFivGvSi~lS~~~ 122 (402)
..++|+.++|++||++++..+++|-..=.+| ..-|..| .+.- +-|+ ..|.|-|+.|+.+..-++|
T Consensus 8 ~~~eRi~~LDilRG~AlLGILl~Ni~~F~~p~~~~~~~~~~~~s~~D~~a~~~v~~f~~~KF~~lFs~LFG~G~~~~~~r 87 (394)
T COG2311 8 AQRERILTLDILRGFALLGILLVNISAFGYPGAAYLNPWSGWLSPLDAWAWALVDLFAQGKFLTLFSFLFGVGLAMMLRR 87 (394)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHhCchHHHhCcCcccCChHHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHH
Confidence 3457999999999999999999996421111 0113333 2221 1222 3699999999999999988
Q ss_pred CCChhH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccCccceehhhHHHHHHHHHHHHHHHHHhcCCCC
Q 015724 123 VPKING-AVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRP 195 (402)
Q Consensus 123 ~~~k~~-~~~~il~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~~~~~~R~~GVLqrIgl~YlvaAll~l~~~~~~~ 195 (402)
+.+|++ .....+||...|+++|++..-. .+|- . |=+.|-+++++.+.++++++
T Consensus 88 ~~~~g~~~~~~~~RR~~~Lll~G~iH~~f----------iW~G------D----IL~~Ya~~g~ill~~~~~~~ 141 (394)
T COG2311 88 AARKGRRWVALYARRLLLLLLLGLIHALF----------IWDG------D----ILLAYALTGLILLLFRRRKP 141 (394)
T ss_pred HHHccCccHHHHHHHHHHHHHHHHHHHHH----------Hhcc------h----HHHHHHHHHHHHHHHHhccc
Confidence 766653 3556689999999999987532 1111 2 34567777777777766553
No 6
>PF10129 OpgC_C: OpgC protein; InterPro: IPR014550 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.81 E-value=0.0012 Score=67.60 Aligned_cols=77 Identities=25% Similarity=0.398 Sum_probs=53.1
Q ss_pred chhhhhhhhhhhhhheeeeeccCCccccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCh---hHHHHHHHHHHH
Q 015724 62 RVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKI---NGAVKKIIFRTL 138 (402)
Q Consensus 62 Rl~SLD~~RGlti~lMIlvn~~g~~~~~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k---~~~~~~il~Rsl 138 (402)
|...||.+||+++++| ++|...+.. +++-.++-+.+.|- .-.|+|++|.+..+.+.|+..| ....+|+.||+.
T Consensus 1 Rd~riD~~RGlaL~~I-fi~Hip~~~--~~~~T~~~~Gfsda-AE~FVflSG~~~gl~Y~~~~~~~g~~~~~~r~~~Ra~ 76 (358)
T PF10129_consen 1 RDLRIDFFRGLALVMI-FIDHIPGNV--LEWFTLRNFGFSDA-AEGFVFLSGYAAGLAYGRRFRRRGLWAATRRLWRRAW 76 (358)
T ss_pred CchHHHHHHHHHHHHH-HHHhcCCcH--HHHhccccccCCCc-chhHhhHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHH
Confidence 6778999999999655 555543322 33434444444442 4579999999999999876533 256889999988
Q ss_pred HHHH
Q 015724 139 KLLF 142 (402)
Q Consensus 139 ~Lf~ 142 (402)
.|..
T Consensus 77 ~lY~ 80 (358)
T PF10129_consen 77 QLYV 80 (358)
T ss_pred HHHH
Confidence 7544
No 7
>PF06423 GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes. GWT1 is involved in GPI anchor biosynthesis; it is required for inositol acylation in yeast [].; GO: 0016746 transferase activity, transferring acyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=97.53 E-value=0.00058 Score=60.77 Aligned_cols=86 Identities=16% Similarity=0.280 Sum_probs=69.3
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHHHhcccchh---------HHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCchhHHH
Q 015724 313 EPEGLLSTISAILSGTIGIHYGHVLIHFKGHS---------ARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYSFSYVC 383 (402)
Q Consensus 313 DPEGlLStlpAi~t~llG~~aG~~L~~~~~~~---------~rl~~~l~~G~~ll~lG~ll~~~~~~PiNK~LWT~SfVL 383 (402)
.-|||+|.+.-++.=++|+..|+.+...+... +...+++.+.+++.++-.+++. ...|+.+++...+||+
T Consensus 2 NrEGi~S~~GY~aIyl~g~~~G~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~vSRRlaNl~Yvl 80 (136)
T PF06423_consen 2 NREGIFSLPGYLAIYLIGVSLGRYILPPSSSSNSSSRRQWIKLLIKLLILSFIFWALYYLLNS-YIEPVSRRLANLPYVL 80 (136)
T ss_pred CcchhhhHHHHHHHHHHHHHHhhhhhCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHh-CCCchhHHhcchHHHH
Confidence 35999999999999999999999986544333 3445666777777777777753 3799999999999999
Q ss_pred HHhHHHHHHHHHHHHh
Q 015724 384 FTAGAAGIVFSALYVL 399 (402)
Q Consensus 384 ~T~G~a~llLa~~y~l 399 (402)
++.+.....+++++.+
T Consensus 81 wv~a~n~~~l~~~~~i 96 (136)
T PF06423_consen 81 WVLAFNTFFLALYLLI 96 (136)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999888876653
No 8
>PF01757 Acyl_transf_3: Acyltransferase family; InterPro: IPR002656 This entry contains a range of acyltransferase enzymes as well as yet uncharacterised proteins from Caenorhabditis elegans. It also includes the protein OatA. The pathogenic bacteria, Staphylococcus aureus, is able to cause persistent infections due to its ability to resist the immune defence system. Lysozyme, a cell wall-lytic enzyme, is one of the first defence compounds induced in serum and tissues after the onset of infection. S. aureus has complete resistance to lysozyme action by O-acetylating its peptidoglycan (PG) by O-acetyltransferase (OatA) [, ]. Staphylococcus bacteria are one of the only bacterial genera that are resistant to lysozyme and tend to colonise the skin and mucosa of humans and animals []. OatA is an integral membrane protein. This entry also includes NolL proteins. NolL-dependent acetylation is specific for the fucosyl penta-N-acetylglucosamine species. In addition, the NolL protein caused elevated production of lipo-chitin oligosaccharides (LCOs). The NolL protein obtained from Rhizobium loti (Mesorhizobium loti) functions as an acetyl transferase [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=97.02 E-value=0.029 Score=52.36 Aligned_cols=53 Identities=23% Similarity=0.468 Sum_probs=37.1
Q ss_pred hhhhhhhhhhhhheeeeeccCCccccccccCCCCC-------chhHHHHHHHHHHHHHHHH
Q 015724 64 ATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGC-------TLADFVMPFFLFIVGVAIA 117 (402)
Q Consensus 64 ~SLD~~RGlti~lMIlvn~~g~~~~~l~Ha~W~G~-------t~aDlVfP~FlFivGvSi~ 117 (402)
.++|.+||++++++++.|....... .....+... .......|.|.++.|..+.
T Consensus 2 ~~iD~lR~ia~l~Vv~~H~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~Ff~iSG~~~~ 61 (340)
T PF01757_consen 2 YWIDGLRGIAILLVVFGHSFIFYFP-PPFQGWPIFDSFSIFLFIGRFAVPLFFFISGYLLA 61 (340)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcc-cccccchhhhhHhhhhhhhhhHHHHHHHHHHHHHH
Confidence 5899999999999999886542111 000011000 5778999999999999998
No 9
>PRK10835 hypothetical protein; Provisional
Probab=97.01 E-value=0.0026 Score=65.22 Aligned_cols=99 Identities=23% Similarity=0.322 Sum_probs=62.5
Q ss_pred hhhhhhhhhhheeeeeccCCcccc-------ccc--cCCCCCc--hhHH-----HHHHHHHHHHHHHHHhcccCCChhHH
Q 015724 66 LDAFRGLTVVLMILVDDAGGAYAR-------IDH--SPWNGCT--LADF-----VMPFFLFIVGVAIALALKKVPKINGA 129 (402)
Q Consensus 66 LD~~RGlti~lMIlvn~~g~~~~~-------l~H--a~W~G~t--~aDl-----VfP~FlFivGvSi~lS~~~~~~k~~~ 129 (402)
||++||++++++.++|-..-..+. ..| +++|-.. +.++ ..|.|.++.|+++.+-.+|..+
T Consensus 1 lD~lRGfALlGIllvNi~~f~~~~~~~~~~~~~~~~~~~d~~~~~~~~~f~~gKf~~LFs~LFG~G~~l~~~r~~~---- 76 (373)
T PRK10835 1 LDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAISPSDAWTWAILDLVAQVKFLTLFALLFGAGLQLLLPRGKR---- 76 (373)
T ss_pred CcHHHHHHHHHHHHHHHHHHhCccccccCccccCCCCchHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHhhhH----
Confidence 799999999999999843111110 111 0111110 1222 2599999999999998864221
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccCccceeh-hhHHHHHHHHHHHHHHH
Q 015724 130 VKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWC-GILQRIALVYVVVALIE 187 (402)
Q Consensus 130 ~~~il~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~~~~~~R~~-GVLqrIgl~YlvaAll~ 187 (402)
...||.+.|+++|++.... -|. .||+-.|++-+++..++
T Consensus 77 --~~~rRl~~Ll~~GliH~~l-----------------lw~GDIL~~YAv~Gl~l~~~~ 116 (373)
T PRK10835 77 --WIQSRLTLLVLLGFIHGLL-----------------FWDGDILLAYGLVGLICWRLI 116 (373)
T ss_pred --HHHHHHHHHHHHHHHHHHH-----------------HccchHHHHHHHHHHHHHHHH
Confidence 3559999999999987432 122 48888887777665443
No 10
>PRK03854 opgC glucans biosynthesis protein; Provisional
Probab=96.50 E-value=0.0036 Score=63.48 Aligned_cols=90 Identities=19% Similarity=0.169 Sum_probs=57.7
Q ss_pred hhcccchhhhhhhhhhhhhheeeeeccC--C--cccc--ccccCCCCC-c--hhHHHHHHHHHHHHHHHHHhcccCCChh
Q 015724 57 QQKSKRVATLDAFRGLTVVLMILVDDAG--G--AYAR--IDHSPWNGC-T--LADFVMPFFLFIVGVAIALALKKVPKIN 127 (402)
Q Consensus 57 ~~~~~Rl~SLD~~RGlti~lMIlvn~~g--~--~~~~--l~Ha~W~G~-t--~aDlVfP~FlFivGvSi~lS~~~~~~k~ 127 (402)
+++++|...+|.+||+++++.++.|... . .+.. .+.+.|-.. . ..-.-+|.|.|++|.....+.+|+ +.+
T Consensus 3 ~~~~~R~~~lD~lR~~a~l~VV~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~mplFf~iSG~~~~~~~~~~-~~~ 81 (375)
T PRK03854 3 PVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEPSLWLTLLNDFIHAFRMQVFFVISGYFSYMLFLRY-PPK 81 (375)
T ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cHH
Confidence 4456899999999999999988877531 1 1100 111122111 0 111458999999999988887654 334
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 015724 128 GAVKKIIFRTLKLLFWGIIL 147 (402)
Q Consensus 128 ~~~~~il~Rsl~Lf~lGl~l 147 (402)
+.++|=++|-+.-++++.++
T Consensus 82 ~f~~~R~~rl~iP~l~~~~~ 101 (375)
T PRK03854 82 RWLKVRLERVGIPMLTAIPL 101 (375)
T ss_pred HHHHHHHHHhhHHHHHHHHH
Confidence 66777778877767766544
No 11
>COG4645 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.76 E-value=0.063 Score=54.77 Aligned_cols=83 Identities=23% Similarity=0.412 Sum_probs=56.0
Q ss_pred ccchhhhhhhhhhhhhheeeeecc-CCccccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCChh---HHHHHHHH
Q 015724 60 SKRVATLDAFRGLTVVLMILVDDA-GGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKIN---GAVKKIIF 135 (402)
Q Consensus 60 ~~Rl~SLD~~RGlti~lMIlvn~~-g~~~~~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~---~~~~~il~ 135 (402)
.+|...||++||++++.|.+ |.. |..+..+.|.+. .+.|- .=.|+||+|+++...++|+--++ ....|+.+
T Consensus 21 mkRdtriDv~Ral~Lv~Ifi-NHvpgt~le~itHknf---gfsda-AEaFVliSGllvgmaYsrKf~~ggrla~~lkiWr 95 (410)
T COG4645 21 MKRDTRIDVFRALALVTIFI-NHVPGTILEEITHKNF---GFSDA-AEAFVLISGLLVGMAYSRKFMKGGRLAGTLKIWR 95 (410)
T ss_pred cCchhHHHHHHHHHHHHHHH-hcccHHHHHHhhcccc---ccccc-chhhhhHHHHHHHHHHhhhhccCcHHHHHHHHHH
Confidence 36999999999999988754 554 433333555442 23332 34699999999999998764332 23458888
Q ss_pred HHHHHHH---HHHHH
Q 015724 136 RTLKLLF---WGIIL 147 (402)
Q Consensus 136 Rsl~Lf~---lGl~l 147 (402)
|+..|.. .|+++
T Consensus 96 RA~~LY~~himtl~i 110 (410)
T COG4645 96 RAMVLYVAHIMTLVI 110 (410)
T ss_pred HHHHHHHHHHHHHHH
Confidence 8888765 45444
No 12
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=89.05 E-value=1.2 Score=45.46 Aligned_cols=55 Identities=16% Similarity=0.366 Sum_probs=40.9
Q ss_pred cchhhhhhhhhhhhhheeeeeccCC-ccccc-ccc-CC---CCCc-hhHHHHHHHHHHHHHH
Q 015724 61 KRVATLDAFRGLTVVLMILVDDAGG-AYARI-DHS-PW---NGCT-LADFVMPFFLFIVGVA 115 (402)
Q Consensus 61 ~Rl~SLD~~RGlti~lMIlvn~~g~-~~~~l-~Ha-~W---~G~t-~aDlVfP~FlFivGvS 115 (402)
+|..++|.+|++++++-+.+|.... .+.+. .|. .| |++. ..-.+-|+|+.+.|.-
T Consensus 3 ~ri~wiD~~r~iA~f~VV~iH~~~~~~t~~~~vs~~~w~i~nvlns~sr~aVPLFfmISGyL 64 (332)
T COG3274 3 PRIVWIDLLRSIACFMVVMIHSTLWSVTEAHFVSPTLWIIANVLNSASRVAVPLFFMISGYL 64 (332)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999988888887643 23222 222 14 6664 6788999999999964
No 13
>PF15345 TMEM51: Transmembrane protein 51
Probab=85.21 E-value=0.62 Score=45.25 Aligned_cols=50 Identities=26% Similarity=0.480 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCccc----------------------ccCCCchhHHHHHhHHHHHHHHHHHHh
Q 015724 350 WVSMGFGLLIIAIILHFTNAIPI----------------------NKQLYSFSYVCFTAGAAGIVFSALYVL 399 (402)
Q Consensus 350 ~l~~G~~ll~lG~ll~~~~~~Pi----------------------NK~LWT~SfVL~T~G~a~llLa~~y~l 399 (402)
+-..|+.|+++|.++-.++++|= +++=-|.-|||+.+|.++|+|++|.-+
T Consensus 9 L~AiG~Gml~LGiiM~vW~~VPg~~~~~~~~~~~~n~~~~~~~~~ksKt~SVAyVLVG~Gv~LLLLSICL~I 80 (233)
T PF15345_consen 9 LTAIGVGMLALGIIMIVWNLVPGFSSGNKPTPQGSNSTEPSDGNLKSKTFSVAYVLVGSGVALLLLSICLSI 80 (233)
T ss_pred HHHHhHhHHHHhhHheeeeecccccCCCCCCCCCCCCcCCCCCcccceeEEEEEehhhHHHHHHHHHHHHHH
Confidence 45678889999988754434442 234567779999999999999999654
No 14
>COG1835 Predicted acyltransferases [Lipid metabolism]
Probab=75.78 E-value=0.74 Score=46.92 Aligned_cols=69 Identities=16% Similarity=0.259 Sum_probs=43.5
Q ss_pred hhhcccchhhhhhhhhhhhhheeeeeccCCccccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCChhH
Q 015724 56 LQQKSKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKING 128 (402)
Q Consensus 56 ~~~~~~Rl~SLD~~RGlti~lMIlvn~~g~~~~~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~~ 128 (402)
.+..++|+.+||.+||+++++-++.|......+ ++..+.+ ...+--..|..++|.-|.-++.++..+++
T Consensus 8 ~~~~~~~~~~ldgLR~iAal~Vv~~H~~~~~~~--~~~g~~~--~g~~gVdiFFvlSGfli~~~~~~~~~~~~ 76 (386)
T COG1835 8 INSSGGRLPGLDGLRAIAALLVVLYHAGFQIGP--GPGGFVG--RGVLGVDLFFVLSGFLITRSLLRSAAAPV 76 (386)
T ss_pred ccccccccCCcHHHHHHHHHHHHHHHccccccC--CCCcccc--ccccceeEeeeccHHHHHHHHHHHhhcCC
Confidence 334467999999999999988777775432111 1121111 22234446888999999998866554443
No 15
>COG3594 NolL Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]
Probab=66.80 E-value=6.2 Score=40.60 Aligned_cols=69 Identities=29% Similarity=0.396 Sum_probs=45.9
Q ss_pred ccchhhhhhhhhhhhhheeeeeccCCccccccccCCCCC---chhHHHHHHHHHHHHHHHHHhcccCCCh---hHHHHHH
Q 015724 60 SKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGC---TLADFVMPFFLFIVGVAIALALKKVPKI---NGAVKKI 133 (402)
Q Consensus 60 ~~Rl~SLD~~RGlti~lMIlvn~~g~~~~~l~Ha~W~G~---t~aDlVfP~FlFivGvSi~lS~~~~~~k---~~~~~~i 133 (402)
.+|-.++|+-||+-|.+.++-|..+... +|.-. -+.-+-+|+|.||+|.- .|...+ .+..+|.
T Consensus 2 ~~R~~~~D~AKGigIlLVV~GH~~~p~~------~~~~~l~~~IysFHMPlFf~ISGyf-----~k~~~~~~~~~~~~kk 70 (343)
T COG3594 2 KKRDLWFDAAKGIGILLVVFGHILQPIS------PWLSVLYKFIYSFHMPLFFFISGYF-----YKTEKRAKSTQYVKKK 70 (343)
T ss_pred chhHHHHhHhhccchhhhhhhhhccccc------ccchHHHHHHHHHHHHHHHhhhhhc-----cccccccchhhHHHHH
Confidence 4799999999999999988877544211 13222 15567799999999974 222222 2566666
Q ss_pred HHHHHH
Q 015724 134 IFRTLK 139 (402)
Q Consensus 134 l~Rsl~ 139 (402)
.++-++
T Consensus 71 ~~tLiv 76 (343)
T COG3594 71 ARTLIV 76 (343)
T ss_pred HHHHHH
Confidence 665554
No 16
>COG5062 Uncharacterized membrane protein [Function unknown]
Probab=63.72 E-value=16 Score=37.93 Aligned_cols=228 Identities=19% Similarity=0.249 Sum_probs=123.1
Q ss_pred cccchhhhhhhhhhhhhhe----eeeeccCCccc-cccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCChhHHHHHH
Q 015724 59 KSKRVATLDAFRGLTVVLM----ILVDDAGGAYA-RIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKI 133 (402)
Q Consensus 59 ~~~Rl~SLD~~RGlti~lM----Ilvn~~g~~~~-~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~~~~~~i 133 (402)
-+.|-..+|..|+..+..- .-|+.+ .|| .+..++--|.++-|+-.-.|+|-.|+-- . |.++ ++.
T Consensus 107 ~~~~~~~it~yR~~i~~~tviaIlAvDFp--~fprRlgKsetwGtsLMDiGVGSFvynsGivs---~-Raks-----K~~ 175 (429)
T COG5062 107 EPYTSMAITRYRFLIIGCTVIAILAVDFP--FFPRRLGKSETWGTSLMDIGVGSFVYNSGIVS---T-RAKS-----KRK 175 (429)
T ss_pred cccchhhhHHHHHHHHHhhhhheeeeccc--cchHhhhhhhcccceeeecccceeEeccceee---c-ccCc-----cHH
Confidence 3457788999998665332 223332 222 2445555588899999999999988742 1 2222 247
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCcccccccCccceehhhHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhhhhhhHHHH
Q 015724 134 IFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAYQWQW 213 (402)
Q Consensus 134 l~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~~~~~~R~~GVLqrIgl~YlvaAll~l~~~~~~~~~~~~~~~~~~~~~~~q~ 213 (402)
+|-++.|+.+|++=.- .. ..+.++ ++.|=.||=.-.=+.--+..+.+.+.+++ ...
T Consensus 176 lkn~lillflGflR~f--~v--k~lnyq---vhvrEyGvhwNFfftLgllnl~~~fir~r-----------------~nf 231 (429)
T COG5062 176 LKNALILLFLGFLRYF--SV--KLLNYQ---VHVREYGVHWNFFFTLGLLNLASLFIRTR-----------------ANF 231 (429)
T ss_pred HHhhhHHHHHHHHHHH--HH--HHhccc---cccHHheeehhHHHHHHHHHHHHHHhhhh-----------------HhH
Confidence 7889999999985321 00 011122 23333344333222223334444444432 235
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCccccCCCCcceeeeecCCCCCCCccccHhHHHhhhhcCcccccCCCcccccccccCC
Q 015724 214 IGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEACTLS 293 (402)
Q Consensus 214 ~v~~~lL~~y~~l~~~l~vP~~~~~~~~~~~~~~~~~~cg~~g~l~~~~n~ag~iDr~vlG~~HlY~~P~~~~~~~c~~~ 293 (402)
.++..+..+|-+++-... + .++.---||.=+
T Consensus 232 lLg~fi~l~he~lLkf~~--------------------------l---~kfi~sa~R~~i-------------------- 262 (429)
T COG5062 232 LLGFFICLTHELLLKFFG--------------------------L---EKFIYSAARSSI-------------------- 262 (429)
T ss_pred HHHHHHHHHHHHHHHhcc--------------------------H---HHhhhcCchhhH--------------------
Confidence 566667777776553210 1 111111111111
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCchhhhhHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH---HHHHHHHHhhCCCc
Q 015724 294 SPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFG---LLIIAIILHFTNAI 370 (402)
Q Consensus 294 ~p~~g~~~~~~~~~~~~~fDPEGlLStlpAi~t~llG~~aG~~L~~~~~~~~rl~~~l~~G~~---ll~lG~ll~~~~~~ 370 (402)
..=.-|||.|++|-+..-+.|.-.|+++...+.. |.+.|-.++.. .+.+=.+.++ -
T Consensus 263 ----------------l~~NrEGI~sll~yisIfl~g~~tg~vvf~~kpT--r~~~wk~~~~~~af~lciylVfnf---~ 321 (429)
T COG5062 263 ----------------LTSNREGITSLLPYISIFLMGADTGKVVFKKKPT--RKKAWKIIILYNAFFLCVYLVFNF---Y 321 (429)
T ss_pred ----------------HHhchhhhhhcchhhhheeeecccceEEecCCCc--hHHHHHHHHHHHHHHHHHHHHHhh---c
Confidence 1127799999999999999999999998654442 33334333333 2233233333 2
Q ss_pred cc-ccCCCchhHHHHHhHHHHH
Q 015724 371 PI-NKQLYSFSYVCFTAGAAGI 391 (402)
Q Consensus 371 Pi-NK~LWT~SfVL~T~G~a~l 391 (402)
|. ..++=...||++..-+-.+
T Consensus 322 s~ssRRlaNlpfv~wi~~lh~f 343 (429)
T COG5062 322 STSSRRLANLPFVMWIMLLHTF 343 (429)
T ss_pred ccchhhhcCccHHHHHHHHHHH
Confidence 22 5667777788776554433
No 17
>COG3619 Predicted membrane protein [Function unknown]
Probab=49.72 E-value=1.4e+02 Score=29.19 Aligned_cols=58 Identities=17% Similarity=0.249 Sum_probs=41.0
Q ss_pred cccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHh
Q 015724 89 RIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKIIFRTLKLLFWGIILQ 148 (402)
Q Consensus 89 ~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~~~~~~il~Rsl~Lf~lGl~l~ 148 (402)
..+-++++....-+...|.+.|++|+.+.--++|+..+ ...-.+.+...++.+++.+.
T Consensus 47 gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~--~~~~~l~~~~~ll~~~v~~~ 104 (226)
T COG3619 47 GIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATR--SFIPVLLLVSLLLALIALLA 104 (226)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHHHHH
Confidence 35667778888899999999999999998888876554 22233445555555555543
No 18
>PRK05771 V-type ATP synthase subunit I; Validated
Probab=44.74 E-value=60 Score=35.83 Aligned_cols=20 Identities=20% Similarity=0.472 Sum_probs=11.3
Q ss_pred CCCCchhhhhHHHHHHHHHHHHH
Q 015724 312 FEPEGLLSTISAILSGTIGIHYG 334 (402)
Q Consensus 312 fDPEGlLStlpAi~t~llG~~aG 334 (402)
.||.-++.-. ...++|+..|
T Consensus 344 iDPT~~~ai~---f~lfFGmM~g 363 (646)
T PRK05771 344 IDPTPFLAIF---FPLFFGMMLG 363 (646)
T ss_pred cCCccHHHHH---HHHHHHHHHH
Confidence 5887776432 3445555554
No 19
>PF13828 DUF4190: Domain of unknown function (DUF4190)
Probab=38.70 E-value=57 Score=25.42 Aligned_cols=49 Identities=27% Similarity=0.398 Sum_probs=25.1
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHHHHH
Q 015724 316 GLLSTISAILSGTIGIHYGHVLIH-FKGHSARLKHWVSMGFGLLIIAIIL 364 (402)
Q Consensus 316 GlLStlpAi~t~llG~~aG~~L~~-~~~~~~rl~~~l~~G~~ll~lG~ll 364 (402)
|++|.+....+.+.|+..|+.=++ -++..++-+.+...|+++..++.++
T Consensus 9 gi~~~~~~~~~~i~aiilG~ial~~i~r~~~~G~g~A~aGivlG~i~~~~ 58 (62)
T PF13828_consen 9 GILGLFLCGLLGIVAIILGHIALRQIRRSGQRGRGMAIAGIVLGYIGIVL 58 (62)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHH
Confidence 344443333455556666655322 1122244455667777776666654
No 20
>PF05857 TraX: TraX protein; InterPro: IPR008875 This family consists of several bacterial TraX proteins. TraX is responsible for the N-terminal acetylation of F-pilin subunits [].
Probab=27.86 E-value=5.1e+02 Score=24.25 Aligned_cols=103 Identities=20% Similarity=0.320 Sum_probs=57.8
Q ss_pred hhhhhhhhhhhheeeeeccCCccccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCChhHHHHHHHHHHHHHHHHH
Q 015724 65 TLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVKKIIFRTLKLLFWG 144 (402)
Q Consensus 65 SLD~~RGlti~lMIlvn~~g~~~~~l~Ha~W~G~t~aDlVfP~FlFivGvSi~lS~~~~~~k~~~~~~il~Rsl~Lf~lG 144 (402)
|-|.+.=++++.|++=|- +-. ...+.+| --.+..+.||.|.|++.-...- .+..+|.++| |+..+
T Consensus 2 s~~~LK~iA~i~M~iDHi-~~~--~~~~~~~-~~~iGR~afPlF~f~~~eG~~~--------T~n~~kY~~R---L~~~a 66 (219)
T PF05857_consen 2 SGFQLKIIAIIAMLIDHI-GFL--FFPDGPW-LRIIGRIAFPLFAFLLVEGFFH--------TRNRKKYLLR---LLIFA 66 (219)
T ss_pred chhHHHHHHHHHHHHHhh-ccc--ccCcchH-HHHhhHHHHHHHHHHHHHHHhh--------hhhHHHHHHH---HHHHH
Confidence 567788899999987443 321 1223333 2238899999999998755433 2223555555 44455
Q ss_pred HHHhhcCCCCCCcccccccCccceehhhHHHHHHHHHHHHHHHH
Q 015724 145 IILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIET 188 (402)
Q Consensus 145 l~l~~~~~~~~~~~~~~~~~~~~R~~GVLqrIgl~YlvaAll~l 188 (402)
++.+..+.-. .. ........+|+--++++..+..++..
T Consensus 67 lis~ip~~l~-----~~-~~~~~~~~NI~fTl~lg~~~l~~~~~ 104 (219)
T PF05857_consen 67 LISQIPFDLA-----FG-KFFDWLSQNILFTLALGLLALYLLDR 104 (219)
T ss_pred HHHHHHHHHH-----hh-cccccccccHHHHHHHHHHHHHHHHH
Confidence 5444321100 00 11123345777777887777666663
No 21
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.27 E-value=1.9e+02 Score=24.73 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=16.7
Q ss_pred CchhhhhHH--HHHHHHHHHHHHHHhc
Q 015724 315 EGLLSTISA--ILSGTIGIHYGHVLIH 339 (402)
Q Consensus 315 EGlLStlpA--i~t~llG~~aG~~L~~ 339 (402)
=|++|+|.. ++.+++|+..|++|-+
T Consensus 42 l~~~g~IG~~~v~pil~G~~lG~WLD~ 68 (100)
T TIGR02230 42 LGMFGLIGWSVAIPTLLGVAVGIWLDR 68 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355666554 4567888888888853
No 22
>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561). Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=27.06 E-value=4.3e+02 Score=25.50 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=23.8
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHHHHHh
Q 015724 311 PFEPEGLLSTISAILSGTIGIHYGHVLI 338 (402)
Q Consensus 311 ~fDPEGlLStlpAi~t~llG~~aG~~L~ 338 (402)
.+.||+.+.....++.+++|....-...
T Consensus 168 ~~~~e~~l~N~~gl~~~~fg~~V~~~~~ 195 (214)
T cd08764 168 NLPAEGVLGNFIGIVLVIFGGLVVYLVT 195 (214)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4689999999999999999999887664
No 23
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=26.86 E-value=8.7e+02 Score=26.62 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=19.2
Q ss_pred cHhHHHhhhhc--CcccccCCCccc
Q 015724 263 NAVGYVDRELW--GINHLYSDPVWS 285 (402)
Q Consensus 263 n~ag~iDr~vl--G~~HlY~~P~~~ 285 (402)
.+-|.++|.+. |..|+...|-|-
T Consensus 216 fiyG~leRlLiP~GLHHil~~pf~~ 240 (524)
T TIGR02005 216 WLYTFLERILIPTGLHHFIYGPFIF 240 (524)
T ss_pred HHHHHHHHHhhhccchhheeeeeee
Confidence 46789999985 999998888885
No 24
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=25.94 E-value=6.6e+02 Score=24.88 Aligned_cols=78 Identities=23% Similarity=0.324 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHhc--ccCCChh--HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccccccCccceehhhHHHHHH
Q 015724 103 FVMPFFLFIVGVAIALAL--KKVPKIN--GAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIAL 178 (402)
Q Consensus 103 lVfP~FlFivGvSi~lS~--~~~~~k~--~~~~~il~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~~~~~~R~~GVLqrIgl 178 (402)
+.+|+.+|+-|.++-=++ ++..-.. +....+---.....++|+++|..+ -.+|..-++--+++
T Consensus 29 ~g~~~vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~~~~-------------~~i~~~~i~~~l~~ 95 (287)
T PF07760_consen 29 LGFPFVLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLNYTP-------------WGIRLIPILISLSI 95 (287)
T ss_pred HHHHHHHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------CCcchhHHHHHHHH
Confidence 678999999999998888 4332111 222223333445667788887431 23566667777777
Q ss_pred HHHHHHHHHHHhcCC
Q 015724 179 VYVVVALIETLTTKR 193 (402)
Q Consensus 179 ~YlvaAll~l~~~~~ 193 (402)
.-++.+++...-+++
T Consensus 96 ~t~~~~~~a~~rr~~ 110 (287)
T PF07760_consen 96 FTLVLSIIAYIRRRR 110 (287)
T ss_pred HHHHHHHHHHHhccc
Confidence 777777666544433
No 25
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=23.36 E-value=1.8e+02 Score=30.96 Aligned_cols=73 Identities=11% Similarity=0.074 Sum_probs=41.1
Q ss_pred CCchhhhhHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCc-hhHHHHHhHHH
Q 015724 314 PEGLLSTISAILSGTIGIHYGHVLIHFKG--HSARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYS-FSYVCFTAGAA 389 (402)
Q Consensus 314 PEGlLStlpAi~t~llG~~aG~~L~~~~~--~~~rl~~~l~~G~~ll~lG~ll~~~~~~PiNK~LWT-~SfVL~T~G~a 389 (402)
--|++|.+|-++..+..+.+|.+--+-+. ...+.++-+.-.+.+...|..+-. ++.-++-+. .+.+++|.+.+
T Consensus 295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~---l~~~~~~~~~~a~~~l~~~~~ 370 (466)
T KOG2532|consen 295 ETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLV---LAFTSDEHRLLAVILLTIAIG 370 (466)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHe---eeecCCCcchHHHHHHHHHHH
Confidence 45899999999999999999987532222 333333333344444444443322 344343333 55555555433
No 26
>PRK11089 PTS system glucose-specific transporter subunits IIBC; Provisional
Probab=22.02 E-value=2.8e+02 Score=30.03 Aligned_cols=77 Identities=16% Similarity=0.132 Sum_probs=42.5
Q ss_pred cHhHHHhhhhc--CcccccCCCcccccccccCCCCCCCCCCCCCCCCcCCCCCCCchhhhhH--------------HHHH
Q 015724 263 NAVGYVDRELW--GINHLYSDPVWSRLEACTLSSPNSGPLREDAPSWCRAPFEPEGLLSTIS--------------AILS 326 (402)
Q Consensus 263 n~ag~iDr~vl--G~~HlY~~P~~~~~~~c~~~~p~~g~~~~~~~~~~~~~fDPEGlLStlp--------------Ai~t 326 (402)
.+-|.++|.+. |..|+...|-|-..-.++. ....+.+|.+.... ...-
T Consensus 196 ~iyG~l~rlLIp~GLHh~l~~p~~~~~gg~~~----------------~~G~~~~G~~~i~~a~~~~~g~~~~~~~~~~f 259 (477)
T PRK11089 196 GIYGFVERSLVPFGLHHIWNVPFQMQIGEYTN----------------AAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMY 259 (477)
T ss_pred HHHHHHHHHHHHhcchHhhhhhheeeccceec----------------cCCceeccHHHHHhccCCcccccccccHHHHh
Confidence 46788899874 9999887787752111110 01234555443332 3334
Q ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHH
Q 015724 327 GTIGIHYGHVLIHFKGHSARLKHWVSMGF 355 (402)
Q Consensus 327 ~llG~~aG~~L~~~~~~~~rl~~~l~~G~ 355 (402)
.+-|...+-++..+++++++.+.++..++
T Consensus 260 glpgaalA~y~~ak~~~kk~vk~l~~sa~ 288 (477)
T PRK11089 260 GLPAAAIAIWHSAKPENRAKVGGIMISAA 288 (477)
T ss_pred hHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 45566666666655555556655554433
No 27
>PF11654 DUF2665: Protein of unknown function (DUF2665); InterPro: IPR024242 This entry represents the non classical export protein 1 family. Family members are Involved in a novel pathway of export of proteins that lack a cleavable signal sequence [].; GO: 0009306 protein secretion
Probab=21.54 E-value=1.1e+02 Score=22.95 Aligned_cols=33 Identities=12% Similarity=0.290 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhcccCCC--hhHHHHHHHHH
Q 015724 104 VMPFFLFIVGVAIALALKKVPK--INGAVKKIIFR 136 (402)
Q Consensus 104 VfP~FlFivGvSi~lS~~~~~~--k~~~~~~il~R 136 (402)
.=|+|-.++|++-.+...++.. ++.....+++|
T Consensus 7 lDP~~av~iG~~ayyl~e~R~~rp~g~~L~eLl~~ 41 (47)
T PF11654_consen 7 LDPLFAVFIGTSAYYLYENREGRPEGHSLNELLRR 41 (47)
T ss_pred hhhHHHHHHHHHHHHHHHHhccCCCCCcHHHHHHH
Confidence 3488999999999999987643 34555555554
No 28
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=21.02 E-value=4.1e+02 Score=22.87 Aligned_cols=60 Identities=28% Similarity=0.244 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhcccchhH--HHHHHHHHHHHHHHHHHH-HhhCCCcccccCCCchhHHHHHhHHHHHHH
Q 015724 324 ILSGTIGIHYGHVLIHFKGHSA--RLKHWVSMGFGLLIIAII-LHFTNAIPINKQLYSFSYVCFTAGAAGIVF 393 (402)
Q Consensus 324 i~t~llG~~aG~~L~~~~~~~~--rl~~~l~~G~~ll~lG~l-l~~~~~~PiNK~LWT~SfVL~T~G~a~llL 393 (402)
+.+-++|-.+|-.+- ++..++ .-++.=..++++-++|++ +..+ .| ++..+.|.|..++-+
T Consensus 9 ~i~fiiGs~~GL~yS-YkKy~~P~v~k~iD~~ALv~aiiG~~~~~vn--~~-------~~~~~~~ig~~li~~ 71 (99)
T PF09877_consen 9 IILFIIGSFLGLEYS-YKKYREPFVEKKIDKLALVLAIIGGLILAVN--SP-------SSPILYTIGAFLIGF 71 (99)
T ss_pred HHHHHHHHHHHHHHH-HHHhccchhhhcccHHHHHHHHHHHHHHHhc--Cc-------chhHHHHHHHHHHhh
Confidence 444555666664442 222111 112223456666677776 5553 55 777888887655443
No 29
>PLN02810 carbon-monoxide oxygenase
Probab=20.83 E-value=6.9e+02 Score=24.60 Aligned_cols=28 Identities=21% Similarity=0.280 Sum_probs=24.1
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHHHHHh
Q 015724 311 PFEPEGLLSTISAILSGTIGIHYGHVLI 338 (402)
Q Consensus 311 ~fDPEGlLStlpAi~t~llG~~aG~~L~ 338 (402)
.|.||+++.....++.+++|...--...
T Consensus 189 ~~~~Ea~lvN~~Glliv~fg~~V~~~~~ 216 (231)
T PLN02810 189 KYGSEALLVNFTAIITILYGAFVVLTAL 216 (231)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHhhc
Confidence 5789999999999999999998875543
Done!