Your job contains 1 sequence.
>015728
MKEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDP
SIVPNHTLRHLINQWLQMGGGQHFDPNYLATIDSLSTLKHSLQSHEATLETKLQIVQKIH
VVLRESPPASNCLIQLGFLPLLLKQLFGKAESKFSQVYVQFVEESLSCVQKLLLVGETES
LNLLNEESKMESFIVLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREII
SLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMAR
IEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAIC
AGVLTQLLLLLQSQCSNRTKTKARMLLKLLRSKWAEELKHV
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015728
(401 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 422 1.4e-39 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 397 6.3e-37 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 220 1.8e-26 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 226 1.1e-25 2
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 213 1.5e-21 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 222 2.4e-21 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 226 8.0e-21 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 240 1.1e-20 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 236 5.3e-20 2
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 219 9.1e-20 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 250 4.9e-19 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 199 7.0e-19 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 245 7.1e-19 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 218 8.9e-19 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 214 9.4e-19 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 230 1.2e-18 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 215 3.7e-18 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 208 4.9e-18 2
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 237 6.5e-18 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 192 1.2e-17 2
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 216 1.2e-17 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 205 1.4e-16 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 192 2.5e-16 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 191 2.8e-16 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 193 1.4e-15 3
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 189 4.1e-15 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 167 6.4e-14 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 189 9.1e-14 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 199 2.4e-13 2
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 149 4.9e-12 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 179 2.2e-11 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 185 2.7e-11 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 161 5.2e-10 2
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 163 1.5e-09 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 157 1.4e-08 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 126 1.7e-07 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 132 1.9e-07 2
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 146 4.6e-07 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 143 7.4e-07 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 141 1.1e-06 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 141 1.2e-06 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 141 1.2e-06 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 139 1.9e-06 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 137 3.4e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 140 3.6e-06 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 136 4.6e-06 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 135 5.8e-06 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 135 5.8e-06 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 93 6.5e-06 2
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 134 7.4e-06 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 131 1.0e-05 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 135 1.2e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 134 1.6e-05 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 134 1.6e-05 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 89 2.9e-05 2
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 121 3.2e-05 2
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 131 3.3e-05 1
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 128 3.4e-05 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 130 4.5e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 125 8.4e-05 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 120 0.00054 1
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 112 0.00080 1
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 116/404 (28%), Positives = 194/404 (48%)
Query: 4 DRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIV 63
D + IP+ FRCPISLDL +DPVT+ TGQTYDR+SI+ W+A GN TCPVT L D +++
Sbjct: 9 DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68
Query: 64 PNHTLRHLINQWL---QMGGGQHFD-PNYLA---TIDSLSTLKHSLQSHEATLETKLQIV 116
PNHTLR LI +W + G + P A ++ SL + ++ ++ ++ +
Sbjct: 69 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAI 128
Query: 117 QKIHVVLRESPPASNCXXXXXXXXXXXXXXXXXAESKFSQVYVQFVEESLSCVQKLLLVG 176
+++ + R+S N A+ + + + + V ESL+ + LL +
Sbjct: 129 RRLRGLARDSE--KNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLV-LLHMT 185
Query: 177 ETXXXXXXXXXXKMESFIVLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLL 236
ET ++ L S I+ L+E++++ + ++ +L + D +
Sbjct: 186 ETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGA-KSMDLKLIISGSDSIF 244
Query: 237 REIISLVHH---NSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSL 293
++ L+ + + A G++A ALC + R + GA LI + A +R
Sbjct: 245 EGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRL--AADFDRCD 302
Query: 294 AAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQ 353
+A +E L + A + V +VK + RVSD +E A +L+ +C +
Sbjct: 303 TERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDR-ATEYAAGALLALCTAEER 361
Query: 354 AREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRSKWAEE 397
R+EA AG+ C+ R K KA+MLLKLLR W ++
Sbjct: 362 CRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDD 405
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 119/400 (29%), Positives = 178/400 (44%)
Query: 4 DRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGN-LTCPVTMQTLHDPSI 62
D + IP+ FRCPISL+L DPVT+CTGQTYDR+SIE W++ GN TCPVT L D ++
Sbjct: 9 DLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTL 68
Query: 63 VPNHTLRHLINQWL--QMGGGQHFDPNYLATIDSLSTLKHSLQSHEATLETKLQIVQKIH 120
+PNHTLR LI +W G P D S ++ L A T + + +
Sbjct: 69 IPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTS-VRALLSQASAITGTHVSVRSRA- 126
Query: 121 VVLRESPPASNCXXXXXXXXXXXXXXXXXAESKFSQVYV-QFVEESLSCVQKLLLVGETX 179
LR + + FS+ + V ESL+ + L +
Sbjct: 127 AALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQ 186
Query: 180 XXXXXXXXXKMESFIVLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREI 239
++E L S + L+E I+S+ ++ +L + + + +
Sbjct: 187 FVSISSDPGRVEFLTRLLFDSSIETRVNAAALIE-IVSTGTKSADLKGSISNSESVFEGV 245
Query: 240 ISLVHH---NSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAI 296
+ L+ + + A G++ ALCS ++ R + GA LI + A +R
Sbjct: 246 LDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRL--AADFDRCDTER 303
Query: 297 AMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQARE 356
A+A +E L A + V LVK + RVSD +E A +L+ +C + RE
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDR-ATEYAAGALLALCTAEERWRE 362
Query: 357 EAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRSKWAE 396
EA AGV C+ R K KA+ LLKLLR W +
Sbjct: 363 EAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPD 402
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 220 (82.5 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 45/132 (34%), Positives = 73/132 (55%)
Query: 4 DRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNL-TCPVTMQTLHDPSI 62
D+++ IP F CPISLD+ DPV + TG TYDR SIEKWL +G +CPVT Q + + +
Sbjct: 2 DQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDL 61
Query: 63 VPNHTLRHLINQWLQMGGGQHFD--PNYLATIDSLSTLKHSLQSHEATLETKLQIVQKIH 120
PNHTLR LI W + + P I S ++ ++ ++ +++ ++++
Sbjct: 62 TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICK-SEIEKLIKESSSSHLNQVKCLKRLR 120
Query: 121 VVLRESPPASNC 132
++ E+ C
Sbjct: 121 QIVSENTTNKRC 132
Score = 139 (54.0 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 235 LLREIISLVHH--NSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYI-SNALTRER 291
L E+I ++H + +A+ + ++ C NR V+ G I+ +I + + + ER
Sbjct: 256 LFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSER 315
Query: 292 SLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMI--CC 349
+ +AM ++ L + +N+ + + K + RVS SE A+ L+ + C
Sbjct: 316 RNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQIT-SERAVRVLLSVGRFC 374
Query: 350 DSLQAREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRSKWAE 396
+ +E + GV C N+TK KA+ LLKL W E
Sbjct: 375 ATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRE 421
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 226 (84.6 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 47/132 (35%), Positives = 73/132 (55%)
Query: 4 DRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNL-TCPVTMQTLHDPSI 62
D ++ IP F CPISL++ DPV + TG TYDR SIEKWL AG +CPVT Q + D +
Sbjct: 7 DEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADL 66
Query: 63 VPNHTLRHLINQWLQMGGGQHFD--PNYLATIDSLSTLKHSLQSHEATLETKLQIVQKIH 120
PNHTLR LI W + + P I S ++ ++ ++ E +++ ++++
Sbjct: 67 TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICK-SEIEKLIRDSASSHENQVKCLKRLR 125
Query: 121 VVLRESPPASNC 132
++ E+ C
Sbjct: 126 QIVSENATNKRC 137
Score = 122 (48.0 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 38/164 (23%), Positives = 71/164 (43%)
Query: 238 EIISLVHH--NSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISN-ALTRERSLA 294
E++ ++ + +A+ A + +C NR V+ G I+ +I + + + T ER
Sbjct: 235 EVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGP 294
Query: 295 AIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMI--CCDSL 352
+AM ++ L + +N+ + + K + RVS S+ A+ L+ + C +
Sbjct: 295 EMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQ-TASDRAVRVLLSVGRFCATP 353
Query: 353 QAREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRSKWAE 396
E + GV C +TK KA+ LLKL W +
Sbjct: 354 ALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKD 397
Score = 73 (30.8 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 31/150 (20%), Positives = 68/150 (45%)
Query: 216 ISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGA 275
I S + T + C + L I+S N +D + L ++ET K L+
Sbjct: 127 IVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKK 186
Query: 276 INGLIAYISNALTRERSLAAI-AMARIEQLLAIENSKDALINNPNGVYALVKMVF-RVSD 333
N ++ ++ + R + + A ++ +L + + ++ P +V+++ R+S
Sbjct: 187 DNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILDDRISQ 246
Query: 334 HEGSENAINSLMMICCDSLQAREEAICAGV 363
+ ++ A++ L+ IC + R +A+ AGV
Sbjct: 247 -KATKAAMHILVNICPWG-RNRHKAVEAGV 274
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 213 (80.0 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 39/68 (57%), Positives = 47/68 (69%)
Query: 8 TIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHT 67
T+P F+CPISLD+ PV+L TG TYDR SI++WL GN TCP TMQ L + VPN T
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLT 69
Query: 68 LRHLINQW 75
L LI+ W
Sbjct: 70 LHRLIDHW 77
Score = 99 (39.9 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 39/163 (23%), Positives = 81/163 (49%)
Query: 190 MESFIVLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEA 249
+ SF +L + G+ +K C V I+ E+K + + K + L+ EII L+ +S++
Sbjct: 191 LTSFFLLIKRGNPKLKID-CSAVLEFIAVDAESKLI---IAKGEGLVTEIIKLISSDSDS 246
Query: 250 S--DAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAI 307
S +A + A+ S++ + L++E L+ +++ LT + ++ ++ L AI
Sbjct: 247 SLIEANLSLLIAIASSKRVKLALIREK----LVTKLTSLLTDPTTSVSVTEKCLKLLEAI 302
Query: 308 ENSKDALINNPNGVYA--LVKMVFRVSDHEGSENAINSLMMIC 348
+ K+ +GV +V + +VS +E+A+ L +C
Sbjct: 303 SSCKEGRSEICDGVCVETVVNKLMKVST-AATEHAVTVLWSVC 344
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 222 (83.2 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 43/84 (51%), Positives = 54/84 (64%)
Query: 3 EDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSI 62
+D ++P F CPISLDL DPV TGQTYDR SI +W+ G+ TCP + QTL D +
Sbjct: 291 DDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRL 350
Query: 63 VPNHTLRHLINQWLQMGGGQHFDP 86
VPN LR LI+QW + G Q+ P
Sbjct: 351 VPNRALRSLISQWCGVYGLQYDSP 374
Score = 97 (39.2 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 39/170 (22%), Positives = 72/170 (42%)
Query: 196 LFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVR 255
+ E GS ++K + ++ + + + LG L R ++S ++ A + V
Sbjct: 407 MLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLS---NDWMAQENAVT 463
Query: 256 AFSALCSTETNR-KTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDAL 314
A L E N+ + + QEG + ++ + N T E A A + L + N K +
Sbjct: 464 ALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAK--ENAAATLFSLSVVHNFKKLI 521
Query: 315 INNPNGVYALVKMVFRVSDHEGSENAINSLMMICCD-SLQAREEAICAGV 363
+N P V L M+ + + G ++A+ +L + AR CA V
Sbjct: 522 MNEPGAVEELASMLTKGTSR-GKKDAVMALFNLSTHPESSARMLESCAVV 570
Score = 65 (27.9 bits), Expect = 5.2e-18, Sum P(2) = 5.2e-18
Identities = 38/179 (21%), Positives = 79/179 (44%)
Query: 216 ISSSHETKELCCKLGKDDRLLREIISLVHHNSEAS--DAGVRAFSALCSTETNRKTLVQE 273
+S H K+L + + + E+ S++ + DA + F+ E++ + L +
Sbjct: 511 LSVVHNFKKL---IMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARML-ES 566
Query: 274 GAINGLIAYISNALTRERSLAAIAMARIE-QLLAIENSKDALINNPNGVYALVKMVFRVS 332
A+ LI + N E + A+A+ + ++ + S + +I + LV ++ R +
Sbjct: 567 CAVVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITS------LVGLMRRGT 620
Query: 333 DHEGSENAINSLMMICC--DSLQAREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKL 389
+G ENA+++L IC S + A G+ + R K KA +++K+
Sbjct: 621 P-KGKENAVSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNG-TKRAKKKASLIVKM 677
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 226 (84.6 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 48/109 (44%), Positives = 67/109 (61%)
Query: 4 DRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIV 63
D +T+P F CPISLDL TDPV + TGQTYDR+SI +W+ G+ TCP T Q L D IV
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 64 PNHTLRHLINQWLQMGGGQH---FDPNYLATIDSLSTLKHSLQSHEATL 109
PN L++LI QW G + F + + S K ++++++AT+
Sbjct: 360 PNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATV 408
Score = 87 (35.7 bits), Expect = 8.0e-21, Sum P(2) = 8.0e-21
Identities = 39/181 (21%), Positives = 78/181 (43%)
Query: 216 ISSSHETKELCCKLGKDDRLLREIISLVHHNSEAS--DAGVRAFSALCSTETNRKTLVQE 273
+S+ HE K+ ++ D+ + + L+ + + DA V A L + N +++
Sbjct: 518 LSAVHEYKK---RIAIVDQCVEALALLLQNGTPRGKKDA-VTALYNLSTHPDNCSRMIEG 573
Query: 274 GAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSD 333
G ++ L+ + N E + A+A+ + Q L E A+ + V L+ M+ R
Sbjct: 574 GGVSSLVGALKNEGVAEEAAGALALL-VRQSLGAE----AIGKEDSAVAGLMGMM-RCGT 627
Query: 334 HEGSENAINSLMMICCDSLQA-REEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRS 392
G ENA+ +L+ +C A E+ + A + R + KA L ++ +
Sbjct: 628 PRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQR 687
Query: 393 K 393
+
Sbjct: 688 R 688
Score = 63 (27.2 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 28/134 (20%), Positives = 57/134 (42%)
Query: 212 VEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCSTETNRKTLV 271
+ ++ + E + + G L R + S N+ A + V A L E N+ ++
Sbjct: 430 IRLLAKTGKENRAYIAEAGAIPHLCRLLTS---ENAIAQENSVTAMLNLSIYEKNKSRIM 486
Query: 272 QEG-AINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFR 330
+EG + +++ + + LT E A A + L A+ K + V AL ++ +
Sbjct: 487 EEGDCLESIVSVLVSGLTVEAQ--ENAAATLFSLSAVHEYKKRIAIVDQCVEALA-LLLQ 543
Query: 331 VSDHEGSENAINSL 344
G ++A+ +L
Sbjct: 544 NGTPRGKKDAVTAL 557
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 240 (89.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 42/74 (56%), Positives = 53/74 (71%)
Query: 2 KEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPS 61
K+D +T+P FRCPISLD+ PV+LCTG TYDR+SI++WL GN TCP TMQ L +
Sbjct: 3 KDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKD 62
Query: 62 IVPNHTLRHLINQW 75
+PN TL+ LI W
Sbjct: 63 FIPNRTLQRLIEIW 76
Score = 56 (24.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 17/80 (21%), Positives = 38/80 (47%)
Query: 201 SCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIIS-LVHHNSEASDAGVRAFSA 259
S S+ ++ L+E++ S+ E+C G D L+ ++ L+ ++ A++ V +
Sbjct: 297 SVSVTEKCLKLLEILASTKEGRSEIC---GGDGECLKTVVKKLMKVSTAATEHAVTVLWS 353
Query: 260 LCSTETNRKTLVQEGAINGL 279
+ K L ++NG+
Sbjct: 354 VSYLFKEDKALEAVTSVNGV 373
Score = 48 (22.0 bits), Expect = 7.5e-20, Sum P(2) = 7.5e-20
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 196 LFEHGSCSIKKRLC-HLVEVIISSSHETKELC--CKLGKDDRLLREIIS-LVHHNSEASD 251
L E S S+++R C E+ + E + K+ K++R RE++S +V E+ D
Sbjct: 72 LIEIWSDSVRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREVLSKIVRFGRESDD 131
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 236 (88.1 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 3 EDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSI 62
+ R +TIP FRCPISL+L DPV + TGQTY+R+ IEKW+A+G+ TCP T Q + ++
Sbjct: 267 DSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSAL 326
Query: 63 VPNHTLRHLINQWLQMGG 80
PN+ LR LI+QW + G
Sbjct: 327 TPNYVLRSLISQWCETNG 344
Score = 66 (28.3 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
Identities = 26/111 (23%), Positives = 48/111 (43%)
Query: 239 IISLVHHNS-EASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIA 297
++SL+ + + V A L E N+ +++ GA+ ++ + N R AA
Sbjct: 414 LLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAA-- 471
Query: 298 MARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMIC 348
A + L I+ K I + ALV ++ S G ++A +L +C
Sbjct: 472 -ATLFSLSVIDEYK-VTIGGMGAIPALVVLLGEGSQR-GKKDAAAALFNLC 519
Score = 58 (25.5 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 26/115 (22%), Positives = 52/115 (45%)
Query: 233 DRLLREIISLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERS 292
D LL ++ S ++ A +R + NR + + GAI L++ +S++ R +
Sbjct: 370 DALLSKLCSPDTEEQRSAAAELRLLAK--RNANNRICIAEAGAIPLLLSLLSSSDLRTQE 427
Query: 293 LAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMI 347
A A+ + E++K ++I++ G + V + E ENA +L +
Sbjct: 428 HAVTALLNLS---IHEDNKASIISS--GAVPSIVHVLKNGSMEARENAAATLFSL 477
Score = 51 (23.0 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 262 STETNRKTLV---QEGA-INGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINN 317
ST+ N+ T E A I+ L++ + + T E+ AA + +LLA N+ + +
Sbjct: 351 STQPNKPTPACSSSERANIDALLSKLCSPDTEEQRSAAAEL----RLLAKRNANNRICIA 406
Query: 318 PNGVYALVKMVFRVSDHEGSENAINSLM 345
G L+ + SD E+A+ +L+
Sbjct: 407 EAGAIPLLLSLLSSSDLRTQEHAVTALL 434
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 219 (82.2 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 47/126 (37%), Positives = 74/126 (58%)
Query: 7 MTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNH 66
+ +PH F CPI+L++ DPV + TGQTY++ SI+KW AG+ TCP T Q L S+ PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNF 347
Query: 67 TLRHLINQWLQMGG----GQHFDPNYL-ATIDSLSTLKHSLQSHEATLETKLQIVQKIHV 121
L++LI QW + + P+ D +S L +L S + LE + + V+++ +
Sbjct: 348 ALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQ--LEEQRRSVKQMRL 405
Query: 122 VLRESP 127
+ RE+P
Sbjct: 406 LARENP 411
Score = 84 (34.6 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 38/159 (23%), Positives = 70/159 (44%)
Query: 205 KKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCSTE 264
++R + ++ + E + L G LL +++S + +S + V L E
Sbjct: 396 QRRSVKQMRLLARENPENRVLIANAGAIP-LLVQLLS--YPDSGIQENAVTTLLNLSIDE 452
Query: 265 TNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYAL 324
N+K + EGAI +I + N R +A A+ + L EN I NG+ L
Sbjct: 453 VNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSML--DENK--VTIGLSNGIPPL 508
Query: 325 VKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGV 363
V ++ + G ++A+ +L + +S + AI AG+
Sbjct: 509 VDLL-QHGTLRGKKDALTALFNLSLNSAN-KGRAIDAGI 545
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 250 (93.1 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 98/401 (24%), Positives = 174/401 (43%)
Query: 2 KEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPS 61
K D +TIP F CPISL+L DP + TGQTY+RS I++W+ GNL+CP T Q L + +
Sbjct: 237 KSDN-LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFT 295
Query: 62 IVPNHTLRHLINQW-----LQMGGGQHFDPNYLATIDSLSTLKHSLQSHEATLETKL--Q 114
+ PN+ LR LI+QW ++ GG + + + S L + + A L KL Q
Sbjct: 296 LTPNYVLRSLISQWCTKHNIEQPGG-YMNGRTKNSDGSFRDLSGDMSAIRA-LVCKLSSQ 353
Query: 115 IVQKIHVVLRESPPASNCXXXXXXXXXXXXXXXXXAESKFSQVYVQFVEESLSCVQKLLL 174
++ + E S + S + E +++C+ L +
Sbjct: 354 SIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSI 413
Query: 175 VGETXXXXXXXXXXKMESFIVLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDR 234
+ S +++ GS ++ + +S + E K + +G
Sbjct: 414 YEHNKELIMLAGA--VTSIVLVLRAGSMEARENAAATL-FSLSLADENKII---IGASGA 467
Query: 235 LLREIISLVHHNSEAS--DAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERS 292
++ ++ L+ + S DA F+ LC + N+ V+ G + L+ ++++ + ER
Sbjct: 468 IMA-LVDLLQYGSVRGKKDAATALFN-LCIYQGNKGRAVRAGIVKPLVKMLTDS-SSER- 523
Query: 293 LAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSL 352
+A A+ + L + + +K A++ N + L+ + + ENA L+ +C
Sbjct: 524 MADEALTILSVLASNQVAKTAILR-ANAIPPLIDCLQK-DQPRNRENAAAILLCLC---K 578
Query: 353 QAREEAICAGVXXXXX--XXXXXXCSNRTKTKARMLLKLLR 391
+ E+ I G + R K KA LL+LLR
Sbjct: 579 RDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLR 619
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 199 (75.1 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 34/74 (45%), Positives = 50/74 (67%)
Query: 7 MTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNH 66
++ P FRCP+S +L DPV L +GQTYD+ I+KWL++GN TCP T Q L ++ PN
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNL 131
Query: 67 TLRHLINQWLQMGG 80
+R +I++W + G
Sbjct: 132 LIREMISKWCKKNG 145
Score = 93 (37.8 bits), Expect = 7.0e-19, Sum P(2) = 7.0e-19
Identities = 36/121 (29%), Positives = 53/121 (43%)
Query: 229 LGKDDRLLREIISLVHHNSEASDAGVRA-FSALCSTETNRKTLVQEGAINGLIAYISNAL 287
+GK +L+ +I L+ + + V A LC NR V++GA+ L ISN L
Sbjct: 295 IGKSG-ILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGL 353
Query: 288 TRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMI 347
+ LA +AM + A+E + GV L+K+ ENAI L I
Sbjct: 354 YVDELLAILAML-VTHWKAVEE-----LGELGGVSWLLKITRESECKRNKENAIVILHTI 407
Query: 348 C 348
C
Sbjct: 408 C 408
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 245 (91.3 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 83/395 (21%), Positives = 168/395 (42%)
Query: 3 EDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSI 62
E+ ++TIP F+CPIS +L DPV + +G TYDR +IEKW +G TCPVT L
Sbjct: 27 EEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQ 86
Query: 63 VPNHTLRHLINQWL--QMGGG-QHFD-PNYLATIDSLSTL--KHSLQSHEATLETKLQIV 116
+PNHT+R +I W +GGG + P T +S + + S + +++V
Sbjct: 87 IPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMV 146
Query: 117 QKIHVVLRESPPASNCXXXXXXXXXXXXXXXXXAESKFSQVYVQFVEESLSCVQKLLLVG 176
K+ + +ES C +E+ + + +EE++S + +L +G
Sbjct: 147 TKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASL---LLEETVSVLTWMLPIG 203
Query: 177 ETXXXXXXXXXXKMESFIVLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLL 236
+ L +G + + L+E+ ++ H ++ G + +
Sbjct: 204 -LEGQSKLTTTSSFNRLVELLRNGDQNAAFLIKELLELNVTHVHALTKIN---GVQEAFM 259
Query: 237 REIISLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAI 296
+ I + +S ++ + + + + ++ +N + + ++ E S+
Sbjct: 260 KSI----NRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDS---ENSVCEK 312
Query: 297 AMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAR- 355
A+ + + + ++ + N + LVK + ++S+ ++ ++ + +C +
Sbjct: 313 ALTVLNVICETKEGREKVRRNKLVIPILVKKILKISE---KKDLVSVMWKVCKSGDGSEV 369
Query: 356 EEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLL 390
EEA+ G C TK K LLK++
Sbjct: 370 EEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMM 404
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 218 (81.8 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 40/76 (52%), Positives = 51/76 (67%)
Query: 5 RQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVP 64
R IP FRCPISL+L DPV + TGQTY+RSSI+KWL AG+ TCP + +TL + P
Sbjct: 244 RSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTP 303
Query: 65 NHTLRHLINQWLQMGG 80
N+ L+ LI W + G
Sbjct: 304 NYVLKSLIALWCESNG 319
Score = 75 (31.5 bits), Expect = 8.9e-19, Sum P(2) = 8.9e-19
Identities = 28/114 (24%), Positives = 49/114 (42%)
Query: 235 LLREIISLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLA 294
LL E++S + + V A L E N+ +V GAI ++ + N R A
Sbjct: 391 LLVELLS--SPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENA 448
Query: 295 AIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMIC 348
A A + L I+ +K A I + AL+ ++ G ++A ++ +C
Sbjct: 449 A---ATLFSLSVIDENKVA-IGAAGAIQALISLL-EEGTRRGKKDAATAIFNLC 497
Score = 51 (23.0 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 266 NRKTLVQEGAINGLIAYISNA--LTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYA 323
NR + + GAI L+ +S+ T+E S+ A+ I E +K A+++ G
Sbjct: 379 NRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSIN-----EGNKGAIVDA--GAIT 431
Query: 324 LVKMVFRVSDHEGSENAINSLMMI 347
+ V + E ENA +L +
Sbjct: 432 DIVEVLKNGSMEARENAAATLFSL 455
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 214 (80.4 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 37/74 (50%), Positives = 54/74 (72%)
Query: 2 KEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPS 61
K+ ++TIP F CP+SL+L DPV + TGQTY+R+ I++W+ GNLTCP T Q L + +
Sbjct: 234 KKSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFT 293
Query: 62 IVPNHTLRHLINQW 75
+ PN+ LR LI++W
Sbjct: 294 LTPNYVLRSLISRW 307
Score = 79 (32.9 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 37/143 (25%), Positives = 63/143 (44%)
Query: 251 DAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENS 310
DA F+ LC N+ V+ G + L+ +S++ TR R + A+ + L +++
Sbjct: 474 DAATALFN-LCIYHGNKGRAVRAGIVTALVKMLSDS-TRHRMVDE-ALTILSVLANNQDA 530
Query: 311 KDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXXXX-- 368
K A++ N + AL+ + + ENA L+ +C + E+ I G
Sbjct: 531 KSAIVK-ANTLPALIG-ILQTDQTRNRENAAAILLSLC---KRDTEKLITIGRLGAVVPL 585
Query: 369 XXXXXXCSNRTKTKARMLLKLLR 391
+ R K KA LL+LLR
Sbjct: 586 MDLSKNGTERGKRKAISLLELLR 608
Score = 61 (26.5 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 26/127 (20%), Positives = 52/127 (40%)
Query: 264 ETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYA 323
E N++ ++ GA+ ++ + R AA + + LA EN +I + A
Sbjct: 404 ENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLS--LADENK--IIIGGSGAIPA 459
Query: 324 LVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXXXXXXXXXXCSNRTKTKA 383
LV ++ + G ++A +L +C + A+ AG+ +R +A
Sbjct: 460 LVDLLENGTPR-GKKDAATALFNLCIYHGN-KGRAVRAGIVTALVKMLSDSTRHRMVDEA 517
Query: 384 RMLLKLL 390
+L +L
Sbjct: 518 LTILSVL 524
Score = 61 (26.5 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 29/144 (20%), Positives = 55/144 (38%)
Query: 248 EASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAI 307
EA + +L + N+ + GAI L+ + N R + AA A+ L I
Sbjct: 429 EARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFN----LCI 484
Query: 308 ENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXXX 367
+ V ALVKM+ + H + A+ +++ + ++ A+ + A
Sbjct: 485 YHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEAL-TILSVLANNQDAKSAIVKANTLPAL 543
Query: 368 XXXXXXXCSNRTKTKARMLLKLLR 391
+ + A +LL L +
Sbjct: 544 IGILQTDQTRNRENAAAILLSLCK 567
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 230 (86.0 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 43/75 (57%), Positives = 51/75 (68%)
Query: 1 MKEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDP 60
+KE IP +F CPISL+ DPVTLCTGQTY+R +I KW G+LTCP TMQ L D
Sbjct: 56 IKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDD 115
Query: 61 SIVPNHTLRHLINQW 75
++ PN TL HLI W
Sbjct: 116 TVTPNKTLHHLIYTW 130
Score = 52 (23.4 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 28/136 (20%), Positives = 60/136 (44%)
Query: 267 RKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVK 326
R +V GA+ L+ + + + +A+ ++ L + A+ ++ N + V+
Sbjct: 308 RSLMVSIGAVPQLVDILPSL---DPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVR 364
Query: 327 MVFRVSDHEGSENAINSLMMICCDSLQAREE----AICAGVXXXXXXXXXXXCSNRTKTK 382
++ RVS++ + A++ L +C L A EE A+ G+ C K +
Sbjct: 365 VLMRVSEN-CTNYALSILWSVC--KL-APEECSPLAVEVGLAAKLLLVIQSGCDAALKQR 420
Query: 383 ARMLLKLLRSKWAEEL 398
+ LLKL +++ +
Sbjct: 421 SAELLKLCSLHYSDTM 436
Score = 50 (22.7 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 267 RKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVK 326
RKT+V+EG ++ +I+ + T ++ + +A + L +SK L+ P V +V
Sbjct: 182 RKTVVEEGGVS-VISSLLGPFT-SHAVGSEVVAILVSLDLDSDSKSGLMQ-PAKVSLIVD 238
Query: 327 MVFRVSDHEGS-ENAINSLMMI 347
M+ ++GS E IN +I
Sbjct: 239 ML-----NDGSNETKINCARLI 255
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 215 (80.7 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 40/67 (59%), Positives = 46/67 (68%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP +F CPISL+ DPVTLCTGQTY+RS+I KW G+ TCP TMQ L D + PN TL
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 69 RHLINQW 75
LI W
Sbjct: 120 HQLIYTW 126
Score = 66 (28.3 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 49/209 (23%), Positives = 94/209 (44%)
Query: 207 RLCHLVEVIISSSHETKELCCKL-GK--DDRLLR-EIIS----LVHHNSEASDA----GV 254
R+ +V+++ S ETK C +L G+ +++ R E++S LV D GV
Sbjct: 228 RVSLMVDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGV 287
Query: 255 R-AFSALCSTETN---RKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENS 310
A + L S + R LV+ GA+ L+ + L E +A+ + ++ L
Sbjct: 288 SPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLP-CLDVECLESALFV--LDSLCLESEG 344
Query: 311 KDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMIC-CDSLQAREEAICAGVXXXXXX 369
+ AL ++ N + V+++ +VS+ + + AI+ L +C S + A+ G+
Sbjct: 345 RIALKDSVNTIPHTVRLLMKVSE-KCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLL 403
Query: 370 XXXXXCSNRTKTKARMLLKLLRSKWAEEL 398
C K ++ LLKL +++ +
Sbjct: 404 VIQSGCDPALKQRSAELLKLCSLHYSDSM 432
Score = 43 (20.2 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 14/77 (18%), Positives = 33/77 (42%)
Query: 276 INGLIAYISNALTRERSLAAI-AMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDH 334
+ G I L + + A + A++ ++Q++ + + GV+ + ++ + H
Sbjct: 141 VQGRAIEILGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSH 200
Query: 335 EGSENAINSLMMICCDS 351
AI L+ + DS
Sbjct: 201 AVGSEAIAILVNLELDS 217
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 208 (78.3 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 38/72 (52%), Positives = 49/72 (68%)
Query: 4 DRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIV 63
+ ++TIP F+CPIS+DL DPV + TG TYDR SIE W+ +GN TCPVT L +
Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQI 85
Query: 64 PNHTLRHLINQW 75
PNHT+R +I W
Sbjct: 86 PNHTIRKMIQGW 97
Score = 73 (30.8 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 35/192 (18%), Positives = 82/192 (42%)
Query: 203 SIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCS 262
S+++ +++ I+S ET+ ++ + ++ L+ +S +S + + A+
Sbjct: 227 SVRQNAAFIMKEILSLD-ETR--VHSFAVENGVAEALVKLIR-DSVSSSSTKSSLIAIYQ 282
Query: 263 TETNRKTLVQEGAINGLIAY-ISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGV 321
+ + E GL++ + + E S+ A+A ++ + E+ ++ + N +
Sbjct: 283 MVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVM 342
Query: 322 YALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXXXXXXXXXXCSNRTKT 381
LVK + +VS+ + L + + A E+A+ G TK
Sbjct: 343 PLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKE 402
Query: 382 KARMLLKLLRSK 393
KA LLK++ ++
Sbjct: 403 KATELLKMMNTQ 414
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 237 (88.5 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 43/77 (55%), Positives = 53/77 (68%)
Query: 7 MTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNH 66
+T+P F+CPISLD+ PV+LCTG TYDR+SI++WL GN TCP TMQ L VPN
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69
Query: 67 TLRHLINQWLQMGGGQH 83
TL+ LIN W G +H
Sbjct: 70 TLQRLINIWSDSIGRRH 86
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 192 (72.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 7 MTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNH 66
++IP FRCP+S +L DPV + +GQT+DR+SI+KWL G CP T Q L ++PN+
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 67 TLRHLINQWLQ 77
T++ +I WL+
Sbjct: 296 TVKAMIASWLE 306
Score = 97 (39.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 38/174 (21%), Positives = 76/174 (43%)
Query: 228 KLGKDDRLLREIISLVHHNS--EASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISN 285
++G+ + ++ +++L+ + DA F+ L T N+ +VQ A+ Y+
Sbjct: 591 RIGQSNAAIQALVNLLGKGTFRGKKDAASALFN-LSITHDNKARIVQAKAVK----YLVE 645
Query: 286 ALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLM 345
L + + A+A + L A+ + A++ G+ LV+ V + G ENA + L+
Sbjct: 646 LLDPDLEMVDKAVALLANLSAVGEGRQAIVRE-GGIPLLVETV-DLGSQRGKENAASVLL 703
Query: 346 MICCDSLQAREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRSKWAEELK 399
+C +S + + G + R K KA+ LL R++ +K
Sbjct: 704 QLCLNSPKFCTLVLQEGAIPPLVALSQSG-TQRAKEKAQQLLSHFRNQRDARMK 756
Score = 63 (27.2 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 22/107 (20%), Positives = 54/107 (50%)
Query: 239 IISLVHHNSEAS-DAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIA 297
++SL++ + + + V A L +E N+ +V+ GAI L+ ++ R + +A
Sbjct: 519 LLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSA-- 576
Query: 298 MARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSL 344
A + L ++ +++ + + + ALV ++ + G ++A ++L
Sbjct: 577 -ASLFSLSVLQVNRERIGQSNAAIQALVNLLGK-GTFRGKKDAASAL 621
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 216 (81.1 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 40/76 (52%), Positives = 51/76 (67%)
Query: 5 RQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVP 64
R IP FRCPISL+L DPV + +GQTY+RS I+KWL +G+ TCP T Q L S+ P
Sbjct: 224 RSPIIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTP 283
Query: 65 NHTLRHLINQWLQMGG 80
N L+ LI+QW + G
Sbjct: 284 NFVLKSLISQWCEANG 299
Score = 66 (28.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 34/149 (22%), Positives = 61/149 (40%)
Query: 251 DAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENS 310
DA F+ LC + N+ V+ G + L+ ++ + T A+++ I LA
Sbjct: 466 DAATAIFN-LCIYQGNKVRAVKAGIVIHLMNFLVDP-TGGMIDEALSLLSI---LAGNPE 520
Query: 311 KDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXXXXXX 370
+I + LV+++ + ENA L ++C + A AGV
Sbjct: 521 GKIVIARSEPIPPLVEVI-KTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKEL 579
Query: 371 XXXXCSNRTKTKARMLLKLLRSKWAEELK 399
++R K KA +L+L+ + LK
Sbjct: 580 SETG-TDRAKRKASSILELMHQANEDSLK 607
Score = 57 (25.1 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 23/103 (22%), Positives = 46/103 (44%)
Query: 246 NSEASDAGVRAFSALCSTETNRKTLVQE-GAINGLIAYISNALTRERSLAAIAMARIEQL 304
N + A L N + + E GAI L+ +S++ R + A A+ +
Sbjct: 336 NQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLS-- 393
Query: 305 LAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMI 347
EN+K +++++ + + +V+ V + E ENA +L +
Sbjct: 394 -IHENNKASIVDS-HAIPKIVE-VLKTGSMETRENAAATLFSL 433
Score = 50 (22.7 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 210 HLVEVIISSS-HETKELCCKLGKDDRLLREIISLVHHNS-EASDAGVRAFSALCSTETNR 267
H V +++ S HE + D + +I+ ++ S E + +L + N+
Sbjct: 384 HAVTALLNLSIHENNKASIV---DSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENK 440
Query: 268 KTLVQEGAINGLIAYISNALTRERSLAAIAM 298
T+ GAI LI + + R + AA A+
Sbjct: 441 VTIGAAGAIPPLINLLCDGSPRGKKDAATAI 471
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 205 (77.2 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 36/69 (52%), Positives = 48/69 (69%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP FRCPISL++ DPV + +GQTY+R+ IEKW+ G+ TCP T Q L ++ PN+ L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 69 RHLINQWLQ 77
R LI QW +
Sbjct: 316 RSLIAQWCE 324
Score = 70 (29.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 31/119 (26%), Positives = 50/119 (42%)
Query: 246 NSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLL 305
+S + V A L E N+ +V GAI G++ + R AA A + L
Sbjct: 407 DSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAA---ATLFSLS 463
Query: 306 AIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQARE-EAICAGV 363
I+ +K I + LV ++ G ++A +L +C Q + +AI AGV
Sbjct: 464 VIDENK-VTIGALGAIPPLV-VLLNEGTQRGKKDAATALFNLCI--YQGNKGKAIRAGV 518
Score = 58 (25.5 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 266 NRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALV 325
NR + + GAI L+ +S +R + + A+ + EN+K A+++ G +
Sbjct: 386 NRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLS---ICENNKGAIVSA--GAIPGI 440
Query: 326 KMVFRVSDHEGSENAINSLMMI 347
V + E ENA +L +
Sbjct: 441 VQVLKKGSMEARENAAATLFSL 462
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 192 (72.6 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHD-PSIVPNHT 67
+P+ FRCPISL++ +DPV L +G T+DR SI++W+ +GN TCP+T L + P ++PNH
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 68 LRHLI 72
LR LI
Sbjct: 65 LRSLI 69
Score = 72 (30.4 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 32/136 (23%), Positives = 58/136 (42%)
Query: 229 LGKDDRLLREIISLVH-HNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNAL 287
+G + ++SL+ N A ALCS NRK +V G++ L+ + L
Sbjct: 214 IGSYPDAISALVSLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSGL 273
Query: 288 TRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMI 347
ER++ + + L+ ++ + V LV V R + +G + ++ L +
Sbjct: 274 --ERAVEVLGL-----LVKCRGGREEMSKVSGFVEVLVN-VLRNGNLKGIQYSLFILNCL 325
Query: 348 CCDSLQAREEAICAGV 363
CC S + +E GV
Sbjct: 326 CCCSGEIVDEVKREGV 341
Score = 67 (28.6 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 21/85 (24%), Positives = 40/85 (47%)
Query: 264 ETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYA 323
+ N+ LV +G I ++ + AIA + L +E +K + + P+ + A
Sbjct: 167 DDNKVGLVADGVIRRIVTVLR---VGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISA 223
Query: 324 LVKMVFRVSDHEGSENAINSLMMIC 348
LV ++ +D E E+A +L +C
Sbjct: 224 LVSLLRVGNDRERKESA-TALYALC 247
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 191 (72.3 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 36/96 (37%), Positives = 59/96 (61%)
Query: 13 FRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLRHLI 72
F CP+SL++ TDPV + +GQTY+++ I++W+ G CP T QTL +++PN+T++ LI
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 296
Query: 73 NQWLQMGGGQHFDPNYLATIDSLSTLKHSLQSHEAT 108
W + + DPN +++ LS L S +T
Sbjct: 297 ANWCETNDVKLPDPNKSTSLNELSPLLSCTDSIPST 332
Score = 86 (35.3 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 47/206 (22%), Positives = 87/206 (42%)
Query: 190 MESFIVLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEA 249
+E I + E+GS K+ + +S E K K+G+ + ++ L+ + +
Sbjct: 629 IEPLIHVLENGSSEAKENSAATL-FSLSVIEENK---IKIGQSGAI-GPLVDLLGNGTPR 683
Query: 250 S--DAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAI 307
DA F+ L + N+ +VQ GA+ LI + A + A+A + L I
Sbjct: 684 GKKDAATALFN-LSIHQENKAMIVQSGAVRYLIDLMDPAA----GMVDKAVAVLANLATI 738
Query: 308 ENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXXX 367
++A I G+ LV++V + G ENA +L+ + +S + + G
Sbjct: 739 PEGRNA-IGQEGGIPLLVEVV-ELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPL 796
Query: 368 XXXXXXXCSNRTKTKARMLLKLLRSK 393
+ R + KA+ LL R++
Sbjct: 797 VALSQSG-TPRAREKAQALLSYFRNQ 821
Score = 64 (27.6 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 253 GVRAFSALCSTETNRKTLVQEGAINGLIAYI-SNALTRERSLAAIAMARIEQLLAIENSK 311
G R SA S ET R E + L+ + S++L +R A A + +LLA N
Sbjct: 524 GSRIVSAP-SNETRRDLSEVETQVKKLVEELKSSSLDTQRQ----ATAEL-RLLAKHNMD 577
Query: 312 DAL-INNPNGVYALVKMVFRVSDHEGSENAINSLM 345
+ + I N + LV++++ +D ENA+ +L+
Sbjct: 578 NRIVIGNSGAIVLLVELLYS-TDSATQENAVTALL 611
Score = 62 (26.9 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 204 IKKRLCHLVEVIISSSHETKE-------LCCKLGKDDRLL----REIISLVH----HNSE 248
++ ++ LVE + SSS +T+ L K D+R++ I+ LV +S
Sbjct: 542 VETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSA 601
Query: 249 ASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALT--RERSLAAI-AMARIE--- 302
+ V A L + N+K + GAI LI + N + +E S A + +++ IE
Sbjct: 602 TQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENK 661
Query: 303 ----QLLAIENSKDALINN-PNGVYALVKMVFRVSDHEGSENAI 341
Q AI D L N P G +F +S H+ ++ I
Sbjct: 662 IKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMI 705
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 193 (73.0 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 47/109 (43%), Positives = 60/109 (55%)
Query: 6 QMTIP-HLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVP 64
QM +P RCPISL L DPV + +GQTY+R IEKW + G+ TCP T Q L S+ P
Sbjct: 268 QMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTP 327
Query: 65 NHTLRHLINQWLQMGGGQ-------HFDPNY--LATIDSLSTLKHSLQS 104
N+ ++ LI W + G Q D +Y LA DS ST S+ S
Sbjct: 328 NNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNS 376
Score = 71 (30.1 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 34/152 (22%), Positives = 72/152 (47%)
Query: 195 VLFEHGSCSIKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVH-HNSEASDAG 253
VL E K ++ + +++ E + G + LLR + S V +N+ A D+G
Sbjct: 431 VLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSG 490
Query: 254 VRA-FSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKD 312
A F+ + N++ ++ G I L IS+A + S A+ + L ++ +K
Sbjct: 491 AMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHG-SATALYL----NLSCLDEAK- 544
Query: 313 ALINNPNGVYALVKMVFRVSDHEGSENAINSL 344
++I + V LV+++ + + + +A+++L
Sbjct: 545 SVIGSSQAVPFLVQLLQKEIETQCKLDALHAL 576
Score = 68 (29.0 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 26/119 (21%), Positives = 52/119 (43%)
Query: 275 AINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDH 334
++ GL+A L E+SLA + L + + KD +++ G+ + + V + D
Sbjct: 597 SLQGLLASTGENLWIEKSLAVLL-----NLASSQEGKDEAVSS-QGMISSLATVLDMGDT 650
Query: 335 EGSENAINSLMMICCDSLQAREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRSK 393
E A++ L+++C + + GV + R + K++ LL L R +
Sbjct: 651 TEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNG-TPRGREKSQKLLMLFREE 708
Score = 59 (25.8 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 17/81 (20%), Positives = 40/81 (49%)
Query: 274 GAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSD 333
G + L+ ++ +A+ + A + A LA+ N+++ + +GV L++ + ++
Sbjct: 466 GFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAE 525
Query: 334 HEGSENAINSLMMICCDSLQA 354
GS A+ L + C D ++
Sbjct: 526 SHGSATALY-LNLSCLDEAKS 545
Score = 46 (21.3 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 104 SHEATLETKLQIVQKIHVVLRESPPA 129
+ E LE K ++V+KI ++L++ A
Sbjct: 433 NEEEGLEKKCKVVEKIRLLLKDDEEA 458
Score = 44 (20.5 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 24/103 (23%), Positives = 46/103 (44%)
Query: 204 IKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCS- 262
I+K L L+ ++SS E K+ L ++ + ++ + V LC+
Sbjct: 611 IEKSLAVLLN--LASSQEGKDEAVSSQGMISSLATVLDM--GDTTEQEQAVSCLLILCNG 666
Query: 263 TETNRKTLVQEGAINGLIAYISNALTR--ERSLAAIAMARIEQ 303
E+ + ++QEG I L++ N R E+S + + R E+
Sbjct: 667 RESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREER 709
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 189 (71.6 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 47/113 (41%), Positives = 62/113 (54%)
Query: 2 KEDRQMTIP-HLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDP 60
++ QM IP RCPISL L DPV + +GQTY+R IEKW + G+ +CP T Q L
Sbjct: 267 RKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHL 326
Query: 61 SIVPNHTLRHLINQWLQMGG-----G--QHFDPNY--LATIDSLSTLKHSLQS 104
S+ PN+ ++ LI W + G G + D NY LA DS S S+ S
Sbjct: 327 SLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDS 379
Score = 76 (31.8 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 36/145 (24%), Positives = 59/145 (40%)
Query: 251 DAGVRAFSALCSTETNRKTLVQEGAINGL--IAYISNALTRERSLAAIAMARIEQLLAIE 308
DA + A L + N TL+ I L +A N L E+SLA + L +
Sbjct: 571 DA-LHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLL-----NLASSR 624
Query: 309 NSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXXXX 368
K+ +I G+ + + V D E A++ L+++C S + + GV
Sbjct: 625 EGKEEMITT-QGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLV 683
Query: 369 XXXXXXCSNRTKTKARMLLKLLRSK 393
S R + K++ LL L R +
Sbjct: 684 SISVNG-SPRGRDKSQKLLMLFREQ 707
Score = 62 (26.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 209 CHLVE---VIISSSHETKELCCKLGKDDRLLREIISLVH-HNSEASDAGVRAFSALCSTE 264
C +VE +++ + E + L G + L+ + S VH +N+ A + G A L
Sbjct: 442 CKVVENVRILLKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNN 501
Query: 265 TNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYAL 324
K L+ +G+I + ++ +S A A L +E +K +I + V
Sbjct: 502 NRNKELM---LTSGVIPLLEKMISCSQSQGP-ATALYLNLSCLEKAKP-VIGSSQAVSFF 556
Query: 325 VKMVFRVSDHEGSENAINSL 344
V ++ + + + +A+++L
Sbjct: 557 VNLLLQDTKTQCKLDALHAL 576
Score = 49 (22.3 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 18/91 (19%), Positives = 39/91 (42%)
Query: 260 LCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPN 319
L E R + G + + ++ +A+ + A A LA+ N+++ + +
Sbjct: 452 LKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTS 511
Query: 320 GVYALVKMVFRVSDHEGSENAINSLMMICCD 350
GV L++ + S +G A+ L + C +
Sbjct: 512 GVIPLLEKMISCSQSQGPATALY-LNLSCLE 541
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 167 (63.8 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
+P FRC +SL+L TDPV + +GQT++R I+KW+ G + CP T Q L ++ PN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 69 RHLINQWLQMGGGQHFDP 86
R + W + DP
Sbjct: 300 RAFLASWCETNNVYPPDP 317
Score = 88 (36.0 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 37/146 (25%), Positives = 60/146 (41%)
Query: 247 SEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLA 306
S DA F+ E N+ +++ GA+ L+ + A A + +A L
Sbjct: 561 SGKKDAATALFNLSIHHE-NKTKVIEAGAVRYLVELMDPAFGMVEK-AVVVLAN---LAT 615
Query: 307 IENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICAGVXXX 366
+ K A I G+ LV++V + G ENA +L+ +C S + I GV
Sbjct: 616 VREGKIA-IGEEGGIPVLVEVV-ELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPP 673
Query: 367 XXXXXXXXCSNRTKTKARMLLKLLRS 392
+ R K KA+ LLK ++
Sbjct: 674 LVALTKSGTA-RGKEKAQNLLKYFKA 698
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 189 (71.6 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 2 KEDRQMTIP-HLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDP 60
+ QM++P RCPISL L DPV + +GQTY+R IEKW + G+ TCP T Q L
Sbjct: 271 RRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHL 330
Query: 61 SIVPNHTLRHLINQWLQMGGGQ 82
+ PN+ ++ LI+ W + G Q
Sbjct: 331 CLTPNYCVKALISSWCEQNGVQ 352
Score = 63 (27.2 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 284 SNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINS 343
S ++ E+ ++A + L+ E KD +++ P+ V L ++ +E E A++
Sbjct: 598 SLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNE-QEQAVSL 656
Query: 344 LMMICCDSLQAREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLRSKWAEELKHV 401
L+++C S E + GV + R + +A+ LL L R + H+
Sbjct: 657 LLILCNHSEICSEMVLQEGVIPSLVSISVNG-TQRGRERAQKLLTLFRELRQRDQTHL 713
Score = 58 (25.5 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 21/88 (23%), Positives = 42/88 (47%)
Query: 264 ETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYA 323
E R + + G + L+ ++ +AL + A A LA++N+++ + +G+
Sbjct: 454 EEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIP 513
Query: 324 LVK-MVFRVSDHEGSENAINSLMMICCD 350
L++ M+ H GS AI L + C +
Sbjct: 514 LLEEMLCNPHSH-GSVTAIY-LNLSCLE 539
Score = 44 (20.5 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 260 LCS-TETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQL 304
LC+ +E + ++QEG I L++ N R R A + +L
Sbjct: 660 LCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFREL 705
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 199 (75.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP FRCPI+L+L DPV + TGQTYDR SI+ W+ +G+ TCP T Q L S+VPN L
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 69 RHLINQW 75
++LI W
Sbjct: 334 KNLIVLW 340
Score = 46 (21.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 264 ETNRKTLVQ-EGAINGLIAYISNALTRERSLAAIA 297
E N+ +++ +GA+NG+I + + T E A A
Sbjct: 440 EQNKTRIMETDGALNGVIEVLRSGATWEAKANAAA 474
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 149 (57.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 3 EDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSI 62
+ + +P F+C +S + DPV + +GQTY++ I +WL +LTCP Q L+ +
Sbjct: 68 DSSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRVCL 126
Query: 63 VPNHTLRHLINQW 75
PNH + LI +W
Sbjct: 127 TPNHLINELITRW 139
Score = 84 (34.6 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 26/122 (21%), Positives = 56/122 (45%)
Query: 243 VHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAY-ISNALTRERSLAAIAMARI 301
V N E + V A + + E N+ L + + L+A + R A + +A +
Sbjct: 226 VDSNPELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASL 285
Query: 302 EQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREEAICA 361
+ +S +I N + AL+ ++ + D + +A+ +++ +CCD + ++AI
Sbjct: 286 SDI----DSNKIIIGNSVALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISL 341
Query: 362 GV 363
G+
Sbjct: 342 GL 343
Score = 45 (20.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 25/109 (22%), Positives = 41/109 (37%)
Query: 236 LREIISLVHHNSEAS---DAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERS 292
L+ +I L+ + S DA C N K + G I I S
Sbjct: 301 LKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRNLFES 360
Query: 293 LAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAI 341
LAA+A+ + + E + N +Y L+ ++ + S ENA+
Sbjct: 361 LAALALISPHERVIQE------VANLGVIYDLLSILRKTSCMVTCENAV 403
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 179 (68.1 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 32/66 (48%), Positives = 45/66 (68%)
Query: 15 CPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLRHLINQ 74
CPISL++ TDPV + TG TYDRSSI KW +GN+TCP+T + L +V N ++R +I +
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 75 WLQMGG 80
+ G
Sbjct: 354 HCKTNG 359
Score = 50 (22.7 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 242 LVHHNSEASDAGVRAFSALCSTET-NRKTLVQEGAINGLIAYISNALTR--ERSLAAI 296
L++ E VR T + NR LV+ GA+ L+ +S+ R E ++A I
Sbjct: 397 LINGGEEMIYRAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGI 454
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 35/76 (46%), Positives = 51/76 (67%)
Query: 5 RQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVP 64
R + + L RCPISL++ +DPV L +G TYDRSSI KW A+GN+TCP T +TL +V
Sbjct: 275 RSLNVDDL-RCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVD 333
Query: 65 NHTLRHLINQWLQMGG 80
N +++ +I + + G
Sbjct: 334 NFSVKQVIQSYSKQNG 349
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 161 (61.7 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 29/84 (34%), Positives = 48/84 (57%)
Query: 3 EDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSI 62
E+ T+P F+C +S + DPV + +G T++R I+KW GN +CP++ + L D ++
Sbjct: 213 EEHNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTL 272
Query: 63 VPNHTLRHLINQWLQMGGGQHFDP 86
PN L+ I++W G DP
Sbjct: 273 KPNVELKSQISEWCAKNGLDVQDP 296
Score = 57 (25.1 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 26/150 (17%), Positives = 67/150 (44%)
Query: 204 IKKRLCHLVEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCST 263
+ + +++EV+ + H ++ G LL+ + S H E + ++ S+ S
Sbjct: 478 VAEEALNILEVLSNHPHGPSKITSS-GSLSSLLKIVESQAEHLQEQAMITLKNLSS--SM 534
Query: 264 ETNRKTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYA 323
E + +V I L +++ + + S+ + + L + E + + P+ + +
Sbjct: 535 EICLE-MVSLDFIQKLTSFLQQKVFCKHSIIIL-----KNLCSTEKGRGCITETPDCLAS 588
Query: 324 LVKMVFRVSDHEGSENAINSLMMICCDSLQ 353
+ +++ + E ENAI+ L+ +C ++
Sbjct: 589 IAELL-ESNVPEEQENAISILLQLCVQKIE 617
Score = 55 (24.4 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 279 LIAYISNALTRERSLAAIAMARIEQLLA-IENSKDALINNPNGVYALVKMVFRVSDHEGS 337
LI Y+ NAL R + I ++ LLA + ++ A+ + V+ + VF S+ +
Sbjct: 422 LITYLKNALERNGTAGEIIKGGLDLLLAFLSGNRRAIESLEEEVFKMFS-VFLESEVV-A 479
Query: 338 ENAINSLMMI 347
E A+N L ++
Sbjct: 480 EEALNILEVL 489
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 163 (62.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 13 FRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLRHLI 72
F+CPIS+++ DP G TY+ KWL +G T P T + L + ++VPNHTLR +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 73 NQWLQMGGGQHFDPNY 88
WL+ +PNY
Sbjct: 297 KDWLEK------NPNY 306
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/75 (40%), Positives = 39/75 (52%)
Query: 2 KEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPS 61
+ D P F CPISL++ DP G TY+ +I WL G+ T P+T LH
Sbjct: 318 RSDEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTK 377
Query: 62 IVPNHTLRHLINQWL 76
+VPN LR I +WL
Sbjct: 378 LVPNLALRSAIQEWL 392
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 126 (49.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 13 FRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAA----GN-LTCPVTMQTLHDPSIVPNHT 67
F CP++ + +PVTL GQT++R +IEKW G L+CP+T + L + P+
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 68 LRHLINQW 75
LR+ I +W
Sbjct: 89 LRNTIEEW 96
Score = 72 (30.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/134 (23%), Positives = 59/134 (44%)
Query: 212 VEVIISSSHETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCSTETNRKTLV 271
V V+ S +++ LC K+G + ++ L SE +A L + E + + V
Sbjct: 209 VSVLFELS-KSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEEN-V 266
Query: 272 QEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFR- 330
++ AING + + L ++MA +LA+ N ++ G + M R
Sbjct: 267 RQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQTVGSSLIDLMRTRD 326
Query: 331 VSDHEGSENAINSL 344
+S E + A+N++
Sbjct: 327 MSQREAALGALNNI 340
Score = 48 (22.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 20/101 (19%), Positives = 45/101 (44%)
Query: 236 LREIISLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAA 295
L+ +++ + S + + + + + + K +V + + LI + TR+ S
Sbjct: 275 LQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVAQTVGSSLIDLMR---TRDMSQRE 331
Query: 296 IAMARIEQLLAIENSKDALINNPNGVYA-LVKMVFRVSDHE 335
A+ + + + E S LIN G+ L+K +F V ++
Sbjct: 332 AALGALNNISSFEGSAKLLINT--GILPPLIKDLFYVGPNQ 370
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 92 IDSL-STLKHSLQSHEATLETKLQIVQKIHVVLRESPPASNC 132
+D L S + ++Q AT L + K + E PP + C
Sbjct: 605 LDLLQSNSQDNIQRASATALENLSLESKNLTKIPELPPPTYC 646
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 132 (51.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
+P F C +S + +P+ + +GQT+++S I +WL TCP T Q L+ ++PNH +
Sbjct: 65 VPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER-TCPRTKQVLYHRFMIPNHLI 123
Query: 69 RHLINQW 75
+I +W
Sbjct: 124 NEVIKEW 130
Score = 58 (25.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/129 (20%), Positives = 51/129 (39%)
Query: 232 DDRLLREIISLVHH-NSEASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRE 290
+ +L+ +I ++ +S A+ A S LC + + V EG I I I
Sbjct: 280 NSEVLKALIHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVS 339
Query: 291 RSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCD 350
L+ +A + E ++N +Y L ++ + ENA+ + IC
Sbjct: 340 MLLSLLAFVSTQNHQTTEE-----MDNLGLIYDLFSILRNSNSLVNDENAVVIVYNIC-K 393
Query: 351 SLQAREEAI 359
S +A + +
Sbjct: 394 SYKALQNVV 402
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 146 (56.5 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P F CPIS ++ +P G TY+ S+ +WL G+ T P+T L ++VPNH LR
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 70 HLINQWLQ 77
I +WLQ
Sbjct: 558 SAIQEWLQ 565
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 143 (55.4 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP F CPI+ +L DPV G +Y++ ++E W++ T P+T L + PN TL
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTL 463
Query: 69 RHLINQWLQ 77
+ IN+WL+
Sbjct: 464 KMAINRWLE 472
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P F CPI+ D+ DP G TY+ +I +W G+ T P+ + L S+VPN LR
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 70 HLINQWLQM 78
I +WLQ+
Sbjct: 414 SAIQEWLQL 422
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP F CPI+ +L DPV G +Y+R ++E W+ T P+T L + PN TL
Sbjct: 402 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTL 461
Query: 69 RHLINQWLQ 77
+ IN+WL+
Sbjct: 462 KMAINRWLE 470
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP F CPI+ +L DPV G +Y+R ++E W+ T P+T L + PN TL
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTL 463
Query: 69 RHLINQWLQ 77
+ IN+WL+
Sbjct: 464 KMAINRWLE 472
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 139 (54.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
+P F C +S + +PV + +GQTY++ I +WL TCP T Q L +PNH +
Sbjct: 72 VPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER-TCPKTKQVLSHRLWIPNHLI 130
Query: 69 RHLINQWLQMGGGQHFDPN 87
LI QW + H P+
Sbjct: 131 SDLITQWCLVNKYDHQKPS 149
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP F CPI+ +L DPV G +Y++ ++E W++ T P+T L + PN TL
Sbjct: 404 IPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTL 463
Query: 69 RHLINQWLQ 77
+ I++WL+
Sbjct: 464 KMAISRWLE 472
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P F CP+ D+ +P G TYDR +IE+WL N T P+T LH +++PN+TL
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN-TSPMTDSPLHSKNLLPNYTLY 825
Query: 70 HLINQW 75
I +W
Sbjct: 826 TAIMEW 831
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P F CPI+ ++ DPV G +Y+R +IE W++ N T P+T L + PN TL+
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 70 HLINQW 75
I +W
Sbjct: 478 MAIFRW 483
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP F CPI+ +L DP+ G +Y++ ++E W++ T P+T L + PN TL
Sbjct: 403 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTL 462
Query: 69 RHLINQWL 76
+ I++WL
Sbjct: 463 KMAIDRWL 470
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 9 IPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTL 68
IP F CPI+ +L DP+ G +Y++ ++E W++ T P+T L + PN TL
Sbjct: 404 IPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTL 463
Query: 69 RHLINQWL 76
+ I++WL
Sbjct: 464 KMAIDRWL 471
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 93 (37.8 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDP---SIVPNH 66
P F CPI+ L +DPV + +GQT++R S++ NL+ + P +++PN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQ---VCRNLSFAPKLHDGTQPDLSTVIPNL 67
Query: 67 TLRHLINQWLQMGGGQHFDPNYLATIDSL 95
++ I W +H P A ++ +
Sbjct: 68 AMKSTILSWCDRNKMEHPRPPDYAYVEGV 96
Score = 87 (35.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 47/194 (24%), Positives = 79/194 (40%)
Query: 210 HLVEVIISSS--HETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCSTETNR 267
H++ + S + E K + LG + LL + S + DA + + L NR
Sbjct: 285 HVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERAR-QDAALALYH-LSLIPNNR 342
Query: 268 KTLVQEGAINGLIAYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKM 327
LV+ GA+ +++ I + + R L + L A K A+++ N V LV
Sbjct: 343 SRLVKAGAVPMMLSMIRSGESASRILLLLC-----NLAACSEGKGAMLDG-NAVSILVGK 396
Query: 328 VFRV----SDHEGSENAINSLMMICCDSLQAREEAICAGVXXXXXXXXXXXC-SNRTKTK 382
+ SD EN + +L+ + +++ R A AG S R K K
Sbjct: 397 LRESGGAESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEK 456
Query: 383 ARMLLKLLRSKWAE 396
A +L+ LR +E
Sbjct: 457 ASKILQTLRGGGSE 470
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 134 (52.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 7 MTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNH 66
+ +P F CPI+ +L DPV G +Y++ ++E W++ + P+T L + PN
Sbjct: 402 VAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNR 461
Query: 67 TLRHLINQWLQ 77
TL+ I++WL+
Sbjct: 462 TLKMAISRWLE 472
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P F CPIS D+ +P G TY+ +WL G P+T L + +++PN LR
Sbjct: 295 PQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLR 354
Query: 70 HLINQWLQ 77
I WLQ
Sbjct: 355 SAIKDWLQ 362
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 28/74 (37%), Positives = 38/74 (51%)
Query: 2 KEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPS 61
KE + P + CPI ++ +P G TY+R +I WL N++ PVT Q L
Sbjct: 718 KEGSNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFK 776
Query: 62 IVPNHTLRHLINQW 75
+ PNHTLR I W
Sbjct: 777 LTPNHTLRSAIRDW 790
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P + CPI ++ DP+ G TY+ +I +WLA G+ T P+T + D +++PNH L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 70 HLINQW 75
I W
Sbjct: 796 LAIQDW 801
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 134 (52.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P F CP+ D+ +P G TYDR +IE+W+ + T PVT L + +++PNHTL
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 70 HLINQW 75
I +W
Sbjct: 809 AAIVEW 814
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 89 (36.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQ-TLHDPS-IVPNHT 67
P F CPI+ L +DPV + +GQT++R S++ G + P + T D S ++PN
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYI--PDLLDGTRPDLSTVIPNLA 89
Query: 68 LRHLINQWLQMGGGQHFDPNYLATIDSL 95
++ I W H P A ++ +
Sbjct: 90 MKSTIFSWCDRQKVDHPRPPDAAYVEGV 117
Score = 86 (35.3 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 45/174 (25%), Positives = 74/174 (42%)
Query: 221 ETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLI 280
E K + LG + LL + S + DA + + L +NR LV+ GA+ L+
Sbjct: 349 ENKMVIGVLGAVEPLLHALRSSESERAR-QDAALALYH-LSLIPSNRTRLVRAGAVPTLL 406
Query: 281 AYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVS--DHEGS- 337
+ + + + R L + L A + K A+++ N V LV + V D E +
Sbjct: 407 SMVRSGDSTSRILLVLC-----NLAACPDGKGAMLDG-NAVAILVGKLREVGGGDSEAAR 460
Query: 338 ENAINSLMMICCDSLQAREEAICAGVXXXXXXXXXXXCSNRTKTKARMLLKLLR 391
EN + L+ +C +L+ R A AG + R K KA +L +R
Sbjct: 461 ENCVAVLLTLCQGNLRFRGLASEAGAEEVLMEVEENG-NERVKEKASKILLAMR 513
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 121 (47.7 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 13 FRCPISLDLFTDPVTLCTGQTYDRSSIEKWLA----AGNL-TCPVTMQTLHDPSIVPNHT 67
F CP++ ++ DPVTL G+T++R +IEKW +G +CP+T Q L + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 68 LRHLINQW 75
LR+ I +W
Sbjct: 87 LRNTIEEW 94
Score = 55 (24.4 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 30/127 (23%), Positives = 54/127 (42%)
Query: 221 ETKELCCKLGKDDRLLREIISLVHHNSEASDAGVRAFSALCSTETNRKTLVQEGAINGLI 280
+++ LC K+G L ++ L NSE +A L + E + + +V++ A G +
Sbjct: 215 KSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSEE-IVRQMASYGRL 273
Query: 281 AYISNALTRERSLAAIAMARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENA 340
+ L ++MA L + N L+ G +LV ++ R D E A
Sbjct: 274 QPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGS-SLVDLM-RSGDMPQREAA 331
Query: 341 INSLMMI 347
+ +L I
Sbjct: 332 LKALNKI 338
Score = 48 (22.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/73 (26%), Positives = 40/73 (54%)
Query: 260 LCSTETNRKT--LVQEGAINGLIAYIS--NALTRERSLAAIAMARIEQLLAIENSKDALI 315
+CS R+T LV+ GA+ L+A + N E +LAA++ + +E L +E ++
Sbjct: 659 ICSL---RETFCLVEGGAVEKLVALLDHENVKVVEAALAALS-SLLEDGLDVEKGVK-IL 713
Query: 316 NNPNGVYALVKMV 328
+ +G+ ++ ++
Sbjct: 714 DEADGIRHILNVL 726
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 25/73 (34%), Positives = 35/73 (47%)
Query: 3 EDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSI 62
E P + CPI ++ DP G TY+R +I++W+ PVT L +
Sbjct: 702 EQANARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDL 761
Query: 63 VPNHTLRHLINQW 75
PNHTLR I +W
Sbjct: 762 TPNHTLRSAIREW 774
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 42/155 (27%), Positives = 73/155 (47%)
Query: 239 IISLVHHNS-EASDAGVRAFSALCSTETNRKTLVQEGAINGLIAYISNALTRERSLAAIA 297
++SL+ + S + LC+ + N++ V GA+ L+ ++ T +A A
Sbjct: 312 LVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGT---GMAEKA 368
Query: 298 MARIEQLLAIENSKDALINNPNGVYALVKMVFRVSDHEGSENAINSLMMICCDSLQAREE 357
M + L AI++ K+A++ G+ ALV+ + +G E AI +L+ +C DS++ R
Sbjct: 369 MVVLSSLAAIDDGKEAIVEE-GGIAALVEAI-EDGSVKGKEFAILTLLQLCSDSVRNRGL 426
Query: 358 AICAG-VXXXXXXXXXXXCSNRTKTKARMLLKLLR 391
+ G + S R K KA LL LR
Sbjct: 427 LVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLR 461
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 26/68 (38%), Positives = 36/68 (52%)
Query: 10 PHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHTLR 69
P F CPI ++ DP G TY+ +I WL + + T P+T L S++ NH LR
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 70 HLINQWLQ 77
I +WLQ
Sbjct: 824 SAIQEWLQ 831
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 28/81 (34%), Positives = 42/81 (51%)
Query: 8 TIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIVPNHT 67
++P F CPIS+++ DP G TY+ +I W G P+T L + ++VPN
Sbjct: 434 SVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRV 493
Query: 68 LRHLINQWLQMGGGQHFDPNY 88
LR I+ +LQ Q +P Y
Sbjct: 494 LRSFIHGYLQQ---QQPNPAY 511
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 120 (47.3 bits), Expect = 0.00054, P = 0.00054
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 4 DRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPSIV 63
D P F CPI+ D+ +P G TY++ +I++WL N P+T S++
Sbjct: 720 DHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLL 778
Query: 64 PNHTLRHLINQW 75
PNH+L I +W
Sbjct: 779 PNHSLLSAIKEW 790
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 112 (44.5 bits), Expect = 0.00080, P = 0.00080
Identities = 22/76 (28%), Positives = 43/76 (56%)
Query: 2 KEDRQMTIPHLFRCPISLDLFTDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQTLHDPS 61
+ED+ +P C I+L++F DPV +G TY+R++I + L P+T + + +
Sbjct: 193 EEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPAN 252
Query: 62 IVPNHTLRHLINQWLQ 77
+VPN ++ + +L+
Sbjct: 253 LVPNLAIKEAVAAYLE 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.132 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 401 363 0.00083 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 615 (65 KB)
Total size of DFA: 236 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.74u 0.10s 26.84t Elapsed: 00:00:01
Total cpu time: 26.75u 0.10s 26.85t Elapsed: 00:00:01
Start: Mon May 20 18:52:11 2013 End: Mon May 20 18:52:12 2013