Query 015729
Match_columns 401
No_of_seqs 117 out of 2018
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 09:01:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015729.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015729hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02409 serine--glyoxylate am 100.0 1.7E-54 3.7E-59 412.5 46.6 399 1-401 1-401 (401)
2 COG0075 Serine-pyruvate aminot 100.0 9.4E-54 2E-58 389.1 44.4 377 10-391 6-382 (383)
3 KOG2862 Alanine-glyoxylate ami 100.0 2.2E-48 4.7E-53 332.1 36.5 366 1-372 10-382 (385)
4 COG0520 csdA Selenocysteine ly 100.0 1.3E-44 2.9E-49 339.4 36.2 349 9-371 23-404 (405)
5 cd06451 AGAT_like Alanine-glyo 100.0 1.1E-42 2.4E-47 328.0 41.0 355 11-371 1-356 (356)
6 TIGR02326 transamin_PhnW 2-ami 100.0 1.3E-41 2.8E-46 321.3 42.4 354 9-371 3-361 (363)
7 PRK13479 2-aminoethylphosphona 100.0 5E-41 1.1E-45 318.0 43.5 358 9-375 5-366 (368)
8 PF00266 Aminotran_5: Aminotra 100.0 4E-41 8.8E-46 318.7 38.4 344 10-362 1-371 (371)
9 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 4.1E-40 8.9E-45 310.6 40.4 350 12-370 2-355 (355)
10 TIGR03392 FeS_syn_CsdA cystein 100.0 1.1E-39 2.5E-44 311.7 37.0 348 8-373 16-396 (398)
11 PRK10874 cysteine sulfinate de 100.0 2.7E-39 6E-44 309.4 36.8 348 8-373 19-399 (401)
12 PRK09295 bifunctional cysteine 100.0 1.5E-39 3.2E-44 311.5 34.8 348 9-373 24-405 (406)
13 PLN02855 Bifunctional selenocy 100.0 2E-39 4.3E-44 312.2 34.3 352 9-373 33-419 (424)
14 TIGR01979 sufS cysteine desulf 100.0 3E-38 6.5E-43 302.7 36.1 352 9-374 19-403 (403)
15 PRK03080 phosphoserine aminotr 100.0 1.4E-38 3E-43 300.7 31.9 343 11-373 14-374 (378)
16 PRK05355 3-phosphoserine/phosp 100.0 4.3E-38 9.4E-43 294.2 32.1 339 9-372 3-358 (360)
17 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.8E-37 3.9E-42 294.8 35.8 345 10-368 1-375 (376)
18 COG1104 NifS Cysteine sulfinat 100.0 3.7E-37 8.1E-42 278.2 32.4 342 9-375 2-380 (386)
19 PLN02651 cysteine desulfurase 100.0 1.9E-37 4.1E-42 292.7 28.9 326 10-360 1-364 (364)
20 TIGR01366 serC_3 phosphoserine 100.0 1.2E-36 2.7E-41 284.9 33.1 341 12-373 6-361 (361)
21 TIGR03402 FeS_nifS cysteine de 100.0 1E-36 2.3E-41 289.5 32.0 339 10-373 1-373 (379)
22 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.3E-36 2.9E-41 290.8 32.3 338 9-366 18-397 (397)
23 TIGR01365 serC_2 phosphoserine 100.0 2.2E-36 4.7E-41 280.7 32.4 339 12-372 6-373 (374)
24 PRK02948 cysteine desulfurase; 100.0 2.5E-36 5.3E-41 287.2 33.5 342 10-375 2-377 (381)
25 cd06453 SufS_like Cysteine des 100.0 2.2E-36 4.7E-41 287.0 32.5 341 10-366 1-373 (373)
26 cd00611 PSAT_like Phosphoserin 100.0 2.3E-35 4.9E-40 276.6 32.0 337 11-370 1-354 (355)
27 TIGR02006 IscS cysteine desulf 100.0 1.5E-35 3.2E-40 283.2 31.2 340 9-373 4-378 (402)
28 TIGR03403 nifS_epsilon cystein 100.0 5.4E-35 1.2E-39 278.0 34.7 341 10-374 1-377 (382)
29 TIGR01364 serC_1 phosphoserine 100.0 1.9E-34 4.1E-39 268.3 32.7 328 19-372 2-348 (349)
30 PLN02452 phosphoserine transam 100.0 2.4E-34 5.1E-39 267.3 32.2 338 9-372 7-363 (365)
31 TIGR01814 kynureninase kynuren 100.0 3.5E-34 7.7E-39 274.1 33.6 345 7-370 26-405 (406)
32 PRK12462 phosphoserine aminotr 100.0 8.8E-33 1.9E-37 253.6 33.4 339 8-372 3-362 (364)
33 PLN02724 Molybdenum cofactor s 100.0 2.7E-33 5.8E-38 286.5 33.0 362 3-371 29-487 (805)
34 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 9.1E-33 2E-37 262.4 34.3 343 9-377 19-386 (387)
35 PRK14012 cysteine desulfurase; 100.0 5.6E-33 1.2E-37 265.7 31.3 339 9-374 4-381 (404)
36 COG0436 Aspartate/tyrosine/aro 100.0 8E-33 1.7E-37 260.4 29.2 333 9-373 29-392 (393)
37 TIGR03235 DNA_S_dndA cysteine 100.0 1.3E-32 2.9E-37 258.8 25.0 308 11-340 1-324 (353)
38 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 4.7E-31 1E-35 248.9 33.0 329 16-370 9-360 (361)
39 KOG1549 Cysteine desulfurase N 100.0 5.3E-31 1.1E-35 239.0 29.5 345 7-373 42-419 (428)
40 PRK13520 L-tyrosine decarboxyl 100.0 2.6E-30 5.7E-35 245.2 33.5 329 13-371 25-370 (371)
41 cd06454 KBL_like KBL_like; thi 100.0 3.1E-30 6.7E-35 242.7 32.5 331 2-369 2-348 (349)
42 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.1E-29 2.4E-34 240.0 33.6 330 17-373 17-369 (370)
43 TIGR01822 2am3keto_CoA 2-amino 100.0 1E-29 2.2E-34 242.9 33.8 334 4-375 41-392 (393)
44 PRK06207 aspartate aminotransf 100.0 6.8E-30 1.5E-34 244.0 32.2 323 18-373 52-403 (405)
45 PRK07324 transaminase; Validat 100.0 1.1E-29 2.3E-34 240.1 32.0 315 22-372 45-370 (373)
46 PRK05957 aspartate aminotransf 100.0 4.1E-29 9E-34 237.8 35.7 332 7-373 27-386 (389)
47 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.9E-29 6.4E-34 238.1 33.8 301 38-368 55-372 (373)
48 PRK07681 aspartate aminotransf 100.0 1.5E-29 3.3E-34 241.7 31.9 316 19-368 45-384 (399)
49 PRK07179 hypothetical protein; 100.0 3.5E-29 7.5E-34 239.8 33.9 333 3-378 56-404 (407)
50 PRK02769 histidine decarboxyla 100.0 5.8E-29 1.3E-33 233.0 34.1 327 9-371 23-371 (380)
51 PLN00175 aminotransferase fami 100.0 2.4E-29 5.2E-34 240.6 31.3 319 20-371 68-412 (413)
52 PRK07682 hypothetical protein; 100.0 3E-29 6.6E-34 238.2 30.7 321 20-373 34-377 (378)
53 PRK06290 aspartate aminotransf 100.0 6.6E-29 1.4E-33 236.9 32.7 332 9-376 45-409 (410)
54 TIGR01141 hisC histidinol-phos 100.0 2.3E-29 5E-34 236.3 28.9 318 9-367 20-346 (346)
55 PRK07309 aromatic amino acid a 100.0 4.3E-29 9.3E-34 237.8 31.0 325 19-373 43-389 (391)
56 PRK08960 hypothetical protein; 100.0 4.6E-29 1E-33 237.5 30.9 332 8-371 33-386 (387)
57 PRK06108 aspartate aminotransf 100.0 7E-29 1.5E-33 236.3 32.1 322 17-371 35-381 (382)
58 TIGR03540 DapC_direct LL-diami 100.0 7.9E-29 1.7E-33 235.8 32.1 316 19-368 42-382 (383)
59 PLN02483 serine palmitoyltrans 100.0 1.2E-28 2.6E-33 239.2 33.7 339 4-377 103-471 (489)
60 PRK09276 LL-diaminopimelate am 100.0 7.2E-29 1.6E-33 236.2 31.6 317 18-368 43-384 (385)
61 PRK13392 5-aminolevulinate syn 100.0 1E-28 2.2E-33 236.9 32.6 333 6-375 51-400 (410)
62 PRK09105 putative aminotransfe 100.0 1.1E-28 2.3E-33 232.8 32.2 318 8-370 44-368 (370)
63 cd00613 GDC-P Glycine cleavage 100.0 6.5E-29 1.4E-33 237.8 31.0 343 11-366 24-398 (398)
64 COG1168 MalY Bifunctional PLP- 100.0 4.1E-28 8.9E-33 215.3 33.4 324 18-373 37-387 (388)
65 PLN03026 histidinol-phosphate 100.0 1.7E-28 3.7E-33 232.4 32.6 311 16-368 62-378 (380)
66 PRK08361 aspartate aminotransf 100.0 5.3E-29 1.1E-33 237.4 29.2 320 20-372 47-390 (391)
67 PRK02731 histidinol-phosphate 100.0 1.6E-28 3.5E-33 232.5 32.2 320 11-371 35-365 (367)
68 PRK05387 histidinol-phosphate 100.0 6.7E-29 1.4E-33 233.9 29.2 313 17-371 35-352 (353)
69 PRK15481 transcriptional regul 100.0 9.9E-29 2.1E-33 238.3 29.9 315 22-371 101-430 (431)
70 PRK05942 aspartate aminotransf 100.0 1.9E-28 4.1E-33 233.8 31.5 315 21-368 50-388 (394)
71 PRK05764 aspartate aminotransf 100.0 2.1E-28 4.5E-33 233.9 31.8 320 20-373 45-392 (393)
72 PRK08912 hypothetical protein; 100.0 2.2E-28 4.7E-33 233.0 31.5 319 20-372 40-386 (387)
73 PRK04870 histidinol-phosphate 100.0 1.7E-28 3.6E-33 231.2 29.7 311 16-370 36-356 (356)
74 TIGR03537 DapC succinyldiamino 100.0 2E-28 4.4E-33 229.9 29.9 314 19-368 13-349 (350)
75 cd00378 SHMT Serine-glycine hy 100.0 4.5E-28 9.7E-33 232.2 32.8 333 8-373 19-386 (402)
76 cd06450 DOPA_deC_like DOPA dec 100.0 4E-29 8.6E-34 234.8 24.9 282 38-368 34-344 (345)
77 TIGR01788 Glu-decarb-GAD gluta 100.0 6.9E-28 1.5E-32 228.7 33.1 336 17-373 50-430 (431)
78 PRK03158 histidinol-phosphate 100.0 1.4E-28 3.1E-33 232.0 27.9 311 17-369 40-358 (359)
79 PTZ00094 serine hydroxymethylt 100.0 2.4E-28 5.3E-33 236.0 30.1 339 9-372 35-408 (452)
80 PLN00145 tyrosine/nicotianamin 100.0 5.2E-28 1.1E-32 232.2 32.0 330 18-374 68-426 (430)
81 TIGR01821 5aminolev_synth 5-am 100.0 7.6E-28 1.7E-32 230.3 32.9 335 4-375 48-399 (402)
82 PRK14807 histidinol-phosphate 100.0 6E-28 1.3E-32 226.7 31.6 311 16-370 32-350 (351)
83 PRK08068 transaminase; Reviewe 100.0 4.5E-28 9.8E-33 230.9 30.9 315 21-368 47-385 (389)
84 PRK07366 succinyldiaminopimela 100.0 5.2E-28 1.1E-32 230.5 31.2 320 17-369 41-387 (388)
85 COG0079 HisC Histidinol-phosph 100.0 8.3E-28 1.8E-32 222.5 31.4 315 16-372 32-354 (356)
86 PRK08153 histidinol-phosphate 100.0 5.9E-28 1.3E-32 228.1 30.7 317 17-373 43-366 (369)
87 PRK06225 aspartate aminotransf 100.0 1.2E-27 2.7E-32 227.2 33.0 322 17-374 39-378 (380)
88 PRK01533 histidinol-phosphate 100.0 2.7E-28 5.8E-33 229.6 28.0 310 16-373 39-356 (366)
89 PRK06939 2-amino-3-ketobutyrat 100.0 1.5E-27 3.3E-32 228.4 33.4 299 40-375 85-396 (397)
90 TIGR00858 bioF 8-amino-7-oxono 100.0 1.6E-27 3.4E-32 225.3 32.6 289 41-367 60-360 (360)
91 PRK09147 succinyldiaminopimela 100.0 8.9E-28 1.9E-32 229.4 31.1 318 17-371 40-395 (396)
92 PRK09064 5-aminolevulinate syn 100.0 2.6E-27 5.6E-32 227.1 34.4 336 3-375 48-400 (407)
93 PRK06348 aspartate aminotransf 100.0 1.4E-27 3E-32 227.0 31.9 317 20-369 43-382 (384)
94 PTZ00433 tyrosine aminotransfe 100.0 1.3E-27 2.7E-32 229.2 31.7 322 19-373 50-409 (412)
95 PF00155 Aminotran_1_2: Aminot 100.0 6E-28 1.3E-32 228.4 28.9 327 8-366 8-363 (363)
96 TIGR01437 selA_rel uncharacter 100.0 1.2E-27 2.6E-32 224.6 30.6 319 16-370 21-363 (363)
97 PRK05166 histidinol-phosphate 100.0 1.4E-27 3E-32 226.0 30.9 313 17-370 47-369 (371)
98 PRK07683 aminotransferase A; V 100.0 2.1E-27 4.5E-32 226.0 32.2 320 20-372 42-383 (387)
99 PRK00011 glyA serine hydroxyme 100.0 1.9E-27 4.1E-32 228.7 32.2 332 8-372 25-389 (416)
100 TIGR03538 DapC_gpp succinyldia 100.0 1.3E-27 2.8E-32 228.1 30.4 316 17-369 39-392 (393)
101 PRK09148 aminotransferase; Val 100.0 1E-27 2.2E-32 229.2 29.7 327 19-376 43-394 (405)
102 PRK13355 bifunctional HTH-doma 100.0 1.8E-27 3.8E-32 234.0 32.1 323 19-372 162-514 (517)
103 PRK08636 aspartate aminotransf 100.0 5.3E-27 1.2E-31 224.3 34.3 323 20-372 47-400 (403)
104 KOG0257 Kynurenine aminotransf 100.0 4.2E-28 9.1E-33 217.3 24.5 299 36-367 67-414 (420)
105 PLN02187 rooty/superroot1 100.0 2.8E-27 6E-32 228.7 32.2 328 19-375 83-441 (462)
106 cd00609 AAT_like Aspartate ami 100.0 1.9E-27 4E-32 223.7 30.2 321 15-368 7-350 (350)
107 TIGR01825 gly_Cac_T_rel pyrido 100.0 5.7E-27 1.2E-31 223.4 33.8 297 40-375 76-384 (385)
108 TIGR01265 tyr_nico_aTase tyros 100.0 4.1E-27 8.8E-32 225.2 32.5 322 19-373 48-402 (403)
109 PRK04366 glycine dehydrogenase 100.0 3.6E-27 7.9E-32 228.8 32.5 339 16-375 78-451 (481)
110 PRK07337 aminotransferase; Val 100.0 2.4E-27 5.2E-32 225.9 30.5 329 10-370 33-387 (388)
111 PRK07550 hypothetical protein; 100.0 3.1E-27 6.7E-32 225.0 30.9 319 18-369 41-384 (386)
112 PRK00950 histidinol-phosphate 100.0 1.5E-27 3.3E-32 225.3 28.2 307 17-370 45-360 (361)
113 PRK05958 8-amino-7-oxononanoat 100.0 7.8E-27 1.7E-31 222.6 33.3 312 20-370 54-385 (385)
114 PRK13393 5-aminolevulinate syn 100.0 1.3E-26 2.9E-31 221.8 34.6 336 3-375 47-399 (406)
115 COG1167 ARO8 Transcriptional r 100.0 3.4E-27 7.3E-32 227.3 30.5 301 38-373 128-456 (459)
116 PRK09082 methionine aminotrans 100.0 5E-27 1.1E-31 223.3 31.4 317 19-368 43-385 (386)
117 PRK08363 alanine aminotransfer 100.0 5.1E-27 1.1E-31 224.3 31.5 324 19-372 46-394 (398)
118 TIGR01264 tyr_amTase_E tyrosin 100.0 5.6E-27 1.2E-31 224.3 31.7 323 18-373 47-400 (401)
119 PLN03032 serine decarboxylase; 100.0 5.4E-27 1.2E-31 218.0 30.5 326 8-368 23-372 (374)
120 PRK08056 threonine-phosphate d 100.0 6.4E-27 1.4E-31 220.2 30.8 311 16-371 30-354 (356)
121 PLN02822 serine palmitoyltrans 100.0 1.7E-26 3.7E-31 223.6 34.6 335 3-373 111-478 (481)
122 PLN00143 tyrosine/nicotianamin 100.0 6.8E-27 1.5E-31 223.7 31.3 331 18-373 48-405 (409)
123 PTZ00377 alanine aminotransfer 100.0 1.1E-26 2.4E-31 226.5 33.2 327 16-372 85-475 (481)
124 PLN02656 tyrosine transaminase 100.0 8E-27 1.7E-31 223.3 31.4 332 8-372 31-403 (409)
125 PRK09265 aminotransferase AlaT 100.0 1.4E-26 2.9E-31 221.7 32.9 323 19-372 49-401 (404)
126 PRK08175 aminotransferase; Val 100.0 1.2E-26 2.6E-31 221.4 32.3 324 21-375 44-392 (395)
127 PLN02721 threonine aldolase 100.0 7.8E-27 1.7E-31 219.9 30.6 320 16-371 14-351 (353)
128 PRK03317 histidinol-phosphate 100.0 6.2E-27 1.3E-31 221.5 29.6 312 16-371 36-363 (368)
129 PRK12414 putative aminotransfe 100.0 1.7E-26 3.7E-31 219.4 32.5 315 19-368 42-383 (384)
130 PRK07908 hypothetical protein; 100.0 1.5E-26 3.2E-31 217.3 31.3 308 17-372 33-347 (349)
131 PRK07568 aspartate aminotransf 100.0 1.3E-26 2.9E-31 221.7 31.4 328 10-373 33-393 (397)
132 PRK02610 histidinol-phosphate 100.0 2.1E-26 4.5E-31 218.1 32.0 317 17-373 39-372 (374)
133 PRK07777 aminotransferase; Val 100.0 2.6E-26 5.6E-31 218.7 32.9 296 42-370 61-384 (387)
134 PLN02450 1-aminocyclopropane-1 100.0 2.4E-26 5.2E-31 222.5 32.4 303 43-374 87-432 (468)
135 PRK03321 putative aminotransfe 100.0 7.6E-27 1.6E-31 219.7 28.0 310 17-371 33-350 (352)
136 PRK14809 histidinol-phosphate 100.0 1.5E-26 3.2E-31 218.0 29.7 316 9-371 31-356 (357)
137 PRK07590 L,L-diaminopimelate a 100.0 1.5E-26 3.3E-31 221.6 30.2 327 17-369 45-408 (409)
138 PLN02376 1-aminocyclopropane-1 100.0 1.6E-26 3.4E-31 224.5 30.6 303 42-372 94-438 (496)
139 PLN02607 1-aminocyclopropane-1 100.0 4.6E-26 1E-30 218.9 32.7 303 42-372 95-437 (447)
140 PRK06855 aminotransferase; Val 100.0 5E-26 1.1E-30 219.0 32.8 325 18-372 47-429 (433)
141 COG0156 BioF 7-keto-8-aminopel 100.0 5.3E-26 1.2E-30 209.7 31.3 329 3-369 41-387 (388)
142 PRK06107 aspartate aminotransf 100.0 6.9E-26 1.5E-30 216.6 33.4 322 19-373 46-401 (402)
143 PRK01688 histidinol-phosphate 100.0 1.1E-26 2.3E-31 218.1 27.2 284 44-367 59-351 (351)
144 PRK05937 8-amino-7-oxononanoat 100.0 7.4E-26 1.6E-30 213.9 32.5 334 2-380 5-358 (370)
145 cd06502 TA_like Low-specificit 100.0 2.3E-26 5E-31 215.4 28.7 317 16-368 6-337 (338)
146 PRK00451 glycine dehydrogenase 100.0 4.8E-26 1E-30 220.8 31.5 312 40-370 110-446 (447)
147 TIGR03542 DAPAT_plant LL-diami 100.0 2.5E-26 5.3E-31 219.7 28.8 321 17-369 44-401 (402)
148 PRK13580 serine hydroxymethylt 100.0 2E-25 4.3E-30 210.8 33.9 333 9-373 50-446 (493)
149 PRK06836 aspartate aminotransf 100.0 6.8E-26 1.5E-30 216.1 30.8 323 19-372 46-391 (394)
150 PLN03227 serine palmitoyltrans 100.0 3.8E-25 8.1E-30 209.8 35.1 336 5-373 2-383 (392)
151 PLN02414 glycine dehydrogenase 100.0 6.2E-26 1.3E-30 231.0 31.2 319 40-374 566-909 (993)
152 PLN02231 alanine transaminase 100.0 1.9E-25 4.2E-30 218.1 33.3 335 10-373 131-528 (534)
153 PRK05839 hypothetical protein; 100.0 7.7E-26 1.7E-30 214.1 29.4 312 17-371 35-373 (374)
154 PRK13238 tnaA tryptophanase/L- 100.0 3.4E-25 7.4E-30 212.8 33.3 321 19-371 58-432 (460)
155 PRK04635 histidinol-phosphate 100.0 5.7E-26 1.2E-30 213.6 27.4 281 44-369 62-352 (354)
156 PRK04781 histidinol-phosphate 100.0 2.8E-25 6.1E-30 209.3 32.1 287 44-370 61-361 (364)
157 KOG0259 Tyrosine aminotransfer 100.0 2.3E-25 5.1E-30 196.4 29.0 333 18-374 77-435 (447)
158 PLN02955 8-amino-7-oxononanoat 100.0 3.1E-25 6.7E-30 209.3 31.8 330 3-376 104-465 (476)
159 PRK07392 threonine-phosphate d 100.0 1.6E-25 3.5E-30 211.1 29.6 309 16-370 32-357 (360)
160 PLN02672 methionine S-methyltr 99.9 6E-25 1.3E-29 224.2 34.7 322 16-371 707-1079(1082)
161 PRK13034 serine hydroxymethylt 99.9 4.8E-25 1E-29 210.5 32.1 334 9-373 29-393 (416)
162 PRK06425 histidinol-phosphate 99.9 3E-25 6.6E-30 206.7 29.5 278 43-370 41-331 (332)
163 PRK06358 threonine-phosphate d 99.9 1E-24 2.3E-29 204.8 31.5 307 17-370 30-353 (354)
164 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.6E-25 5.6E-30 210.4 27.5 307 41-370 32-377 (379)
165 PLN03226 serine hydroxymethylt 99.9 2.2E-24 4.7E-29 207.6 34.1 348 9-372 35-419 (475)
166 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.6E-25 1.2E-29 207.2 28.6 302 41-367 17-352 (352)
167 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.7E-24 3.7E-29 201.3 30.8 306 8-370 26-345 (346)
168 PRK03244 argD acetylornithine 99.9 2.2E-24 4.9E-29 206.2 31.4 290 42-374 85-396 (398)
169 cd00610 OAT_like Acetyl ornith 99.9 1.3E-24 2.9E-29 209.1 29.8 298 41-370 78-413 (413)
170 COG3844 Kynureninase [Amino ac 99.9 1.5E-24 3.2E-29 187.7 26.4 348 9-376 32-406 (407)
171 PRK07865 N-succinyldiaminopime 99.9 1.2E-24 2.6E-29 205.6 27.8 301 19-367 40-363 (364)
172 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.4E-24 3E-29 202.1 27.5 269 44-366 49-329 (330)
173 PRK09275 aspartate aminotransf 99.9 1.4E-24 3E-29 209.3 28.2 321 38-375 130-520 (527)
174 PRK03967 histidinol-phosphate 99.9 2.4E-24 5.2E-29 201.0 29.0 308 10-373 21-335 (337)
175 PRK10534 L-threonine aldolase; 99.9 3E-24 6.5E-29 200.5 29.6 312 16-371 9-332 (333)
176 TIGR03801 asp_4_decarbox aspar 99.9 3E-24 6.5E-29 206.7 30.1 301 62-373 157-517 (521)
177 TIGR03539 DapC_actino succinyl 99.9 1.6E-24 3.4E-29 204.1 27.7 309 10-366 23-356 (357)
178 TIGR03588 PseC UDP-4-keto-6-de 99.9 3.2E-24 6.9E-29 203.7 28.9 313 41-370 28-380 (380)
179 PTZ00376 aspartate aminotransf 99.9 3.4E-24 7.3E-29 205.0 29.2 298 37-371 67-402 (404)
180 PRK14808 histidinol-phosphate 99.9 5.8E-24 1.3E-28 198.1 29.4 297 16-368 29-333 (335)
181 PRK05664 threonine-phosphate d 99.9 1.6E-23 3.4E-28 195.0 31.6 270 45-372 52-328 (330)
182 PRK06959 putative threonine-ph 99.9 9.5E-24 2.1E-28 196.8 30.0 274 45-373 56-334 (339)
183 PLN02880 tyrosine decarboxylas 99.9 4.3E-24 9.4E-29 206.5 27.9 352 9-373 84-485 (490)
184 PRK09257 aromatic amino acid a 99.9 1E-23 2.2E-28 201.4 29.4 312 22-370 47-396 (396)
185 PRK09440 avtA valine--pyruvate 99.9 6.4E-24 1.4E-28 204.2 28.2 293 42-372 74-411 (416)
186 cd00617 Tnase_like Tryptophana 99.9 3E-23 6.4E-28 196.6 32.1 333 8-372 19-408 (431)
187 PLN02590 probable tyrosine dec 99.9 2.4E-23 5.2E-28 201.3 31.9 353 9-374 132-534 (539)
188 COG0399 WecE Predicted pyridox 99.9 2.1E-23 4.6E-28 191.0 29.0 329 20-372 13-373 (374)
189 PLN02271 serine hydroxymethylt 99.9 4.3E-23 9.4E-28 195.5 31.1 350 9-371 149-539 (586)
190 PLN02263 serine decarboxylase 99.9 7.7E-23 1.7E-27 192.8 32.3 298 40-372 131-443 (470)
191 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3E-23 6.5E-28 195.4 29.3 327 20-370 9-375 (376)
192 COG1103 Archaea-specific pyrid 99.9 4.6E-23 9.9E-28 173.9 26.7 338 9-373 16-381 (382)
193 TIGR03799 NOD_PanD_pyr putativ 99.9 5.7E-23 1.2E-27 199.1 31.2 314 36-365 123-518 (522)
194 PRK00854 rocD ornithine--oxo-a 99.9 4.7E-23 1E-27 197.3 30.5 307 21-371 59-400 (401)
195 PRK08637 hypothetical protein; 99.9 8.3E-23 1.8E-27 194.4 31.5 336 13-373 14-387 (388)
196 COG1932 SerC Phosphoserine ami 99.9 9.6E-23 2.1E-27 180.6 29.1 339 9-373 5-364 (365)
197 PLN02242 methionine gamma-lyas 99.9 3.4E-23 7.4E-28 197.0 28.2 295 40-373 74-416 (418)
198 PTZ00125 ornithine aminotransf 99.9 6.2E-23 1.3E-27 196.5 29.7 311 20-373 48-396 (400)
199 PRK09028 cystathionine beta-ly 99.9 7.4E-23 1.6E-27 192.2 29.3 213 42-292 61-277 (394)
200 PRK04073 rocD ornithine--oxo-a 99.9 1E-22 2.3E-27 194.2 30.9 304 20-370 57-395 (396)
201 TIGR00707 argD acetylornithine 99.9 7E-23 1.5E-27 194.8 29.1 287 41-369 68-378 (379)
202 TIGR01329 cysta_beta_ly_E cyst 99.9 5.6E-23 1.2E-27 193.8 28.0 287 42-374 47-377 (378)
203 cd00615 Orn_deC_like Ornithine 99.9 4E-24 8.8E-29 195.5 19.6 226 40-290 57-293 (294)
204 PRK01278 argD acetylornithine 99.9 9.4E-23 2E-27 194.3 29.8 288 42-372 73-388 (389)
205 PRK06767 methionine gamma-lyas 99.9 3E-23 6.5E-28 196.5 26.1 290 41-372 60-385 (386)
206 PRK08776 cystathionine gamma-s 99.9 6.3E-23 1.4E-27 194.6 28.1 214 41-292 59-277 (405)
207 PRK08114 cystathionine beta-ly 99.9 1.4E-22 3.1E-27 189.6 29.7 291 41-372 61-393 (395)
208 PLN02397 aspartate transaminas 99.9 2.5E-22 5.4E-27 192.7 31.1 313 22-371 69-420 (423)
209 cd00614 CGS_like CGS_like: Cys 99.9 2.5E-23 5.5E-28 196.2 23.8 215 40-292 38-257 (369)
210 PRK07504 O-succinylhomoserine 99.9 1E-22 2.3E-27 193.1 28.1 320 10-372 32-395 (398)
211 PRK06234 methionine gamma-lyas 99.9 1.1E-22 2.5E-27 193.2 28.0 294 40-372 62-397 (400)
212 TIGR01324 cysta_beta_ly_B cyst 99.9 2E-22 4.3E-27 189.4 29.3 288 42-372 50-376 (377)
213 TIGR01328 met_gam_lyase methio 99.9 1.2E-22 2.7E-27 192.2 27.9 289 41-372 58-390 (391)
214 PRK08861 cystathionine gamma-s 99.9 5.3E-23 1.1E-27 193.4 25.0 289 40-373 51-384 (388)
215 PRK08133 O-succinylhomoserine 99.9 2.4E-22 5.3E-27 190.3 29.2 289 40-371 59-389 (390)
216 PRK08045 cystathionine gamma-s 99.9 1.2E-22 2.5E-27 191.7 26.8 289 41-372 51-382 (386)
217 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 3.6E-22 7.8E-27 188.9 30.2 307 41-370 30-374 (375)
218 PRK05968 hypothetical protein; 99.9 1.6E-22 3.4E-27 191.5 27.7 288 41-371 62-385 (389)
219 COG0112 GlyA Glycine/serine hy 99.9 4.6E-22 1E-26 177.5 28.8 351 10-396 28-411 (413)
220 COG0076 GadB Glutamate decarbo 99.9 9.7E-23 2.1E-27 194.0 26.0 309 9-335 63-401 (460)
221 TIGR00461 gcvP glycine dehydro 99.9 8E-22 1.7E-26 198.6 33.5 351 10-373 489-868 (939)
222 PRK08354 putative aminotransfe 99.9 1.2E-21 2.5E-26 180.9 32.1 283 21-369 22-309 (311)
223 PRK08064 cystathionine beta-ly 99.9 1.9E-22 4.2E-27 191.0 27.5 286 40-368 52-382 (390)
224 COG4992 ArgD Ornithine/acetylo 99.9 2.4E-22 5.1E-27 182.0 26.6 326 5-373 38-399 (404)
225 TIGR02080 O_succ_thio_ly O-suc 99.9 1.9E-22 4E-27 190.3 27.0 289 40-371 49-380 (382)
226 PRK08249 cystathionine gamma-s 99.9 1.7E-22 3.7E-27 191.3 26.8 216 39-292 61-280 (398)
227 PF00464 SHMT: Serine hydroxym 99.9 6.7E-22 1.5E-26 183.0 30.0 327 9-366 21-399 (399)
228 PRK05367 glycine dehydrogenase 99.9 1.2E-21 2.6E-26 200.9 34.7 344 11-373 502-876 (954)
229 PRK06460 hypothetical protein; 99.9 3.3E-22 7.2E-27 188.4 27.6 292 39-373 42-375 (376)
230 TIGR01325 O_suc_HS_sulf O-succ 99.9 2.7E-22 5.8E-27 189.7 26.7 214 41-292 53-270 (380)
231 KOG1360 5-aminolevulinate synt 99.9 3.8E-22 8.1E-27 176.9 25.3 336 7-377 177-529 (570)
232 KOG0256 1-aminocyclopropane-1- 99.9 8E-22 1.7E-26 175.7 27.2 300 44-371 123-460 (471)
233 PRK02627 acetylornithine amino 99.9 9.2E-22 2E-26 188.3 30.0 311 21-373 57-395 (396)
234 PLN02414 glycine dehydrogenase 99.9 9.9E-22 2.1E-26 200.4 31.7 315 17-367 114-464 (993)
235 PRK08574 cystathionine gamma-s 99.9 2.7E-22 5.8E-27 189.4 25.5 287 41-372 52-384 (385)
236 PRK07810 O-succinylhomoserine 99.9 1.1E-21 2.5E-26 186.0 29.8 214 41-292 69-287 (403)
237 KOG1359 Glycine C-acetyltransf 99.9 4.9E-22 1.1E-26 169.6 23.9 328 4-374 70-414 (417)
238 TIGR01885 Orn_aminotrans ornit 99.9 2E-21 4.4E-26 185.8 31.4 310 20-370 54-400 (401)
239 PRK08134 O-acetylhomoserine am 99.9 6E-22 1.3E-26 189.0 26.8 151 41-206 63-215 (433)
240 PRK05367 glycine dehydrogenase 99.9 1.3E-21 2.7E-26 200.6 30.8 316 17-367 87-437 (954)
241 PRK07503 methionine gamma-lyas 99.9 1.2E-21 2.6E-26 186.2 28.1 216 41-292 64-283 (403)
242 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1E-21 2.3E-26 185.0 27.4 302 41-367 24-363 (363)
243 PRK06176 cystathionine gamma-s 99.9 9.6E-22 2.1E-26 185.3 27.0 288 40-374 48-380 (380)
244 TIGR03246 arg_catab_astC succi 99.9 3E-21 6.6E-26 183.9 30.7 287 41-372 76-395 (397)
245 PRK04311 selenocysteine syntha 99.9 3E-21 6.5E-26 184.4 30.4 327 7-371 85-463 (464)
246 PRK07811 cystathionine gamma-s 99.9 5.4E-22 1.2E-26 187.8 25.1 286 41-371 60-387 (388)
247 PRK07505 hypothetical protein; 99.9 4.1E-21 9E-26 183.7 31.4 323 8-372 45-399 (402)
248 PRK05967 cystathionine beta-ly 99.9 1.9E-21 4.1E-26 182.3 28.1 291 40-373 62-392 (395)
249 PRK05093 argD bifunctional N-s 99.9 3.7E-21 8.1E-26 184.0 30.6 326 3-373 42-401 (403)
250 PRK15407 lipopolysaccharide bi 99.9 1.1E-20 2.3E-25 181.0 33.0 306 42-371 63-435 (438)
251 PRK08247 cystathionine gamma-s 99.9 2E-21 4.2E-26 183.0 26.4 283 40-372 50-364 (366)
252 KOG0634 Aromatic amino acid am 99.9 9.2E-21 2E-25 170.4 29.1 305 41-373 99-467 (472)
253 PRK12566 glycine dehydrogenase 99.9 3.7E-21 8E-26 192.6 29.6 321 39-373 540-877 (954)
254 PRK07050 cystathionine beta-ly 99.9 5.8E-21 1.3E-25 180.9 29.5 289 40-371 63-390 (394)
255 COG0160 GabT 4-aminobutyrate a 99.9 8.1E-21 1.7E-25 177.2 29.5 337 6-373 53-446 (447)
256 PRK08248 O-acetylhomoserine am 99.9 2.3E-21 5.1E-26 185.0 26.6 159 41-214 63-224 (431)
257 PRK05964 adenosylmethionine--8 99.9 1.1E-20 2.4E-25 181.4 31.1 303 42-373 85-423 (423)
258 PLN02368 alanine transaminase 99.9 1.8E-21 3.9E-26 184.8 24.8 249 38-313 103-395 (407)
259 PLN02624 ornithine-delta-amino 99.9 5.8E-21 1.3E-25 185.0 28.7 311 21-372 93-444 (474)
260 TIGR00474 selA seryl-tRNA(sec) 99.9 1.2E-20 2.7E-25 179.8 30.3 321 7-366 80-453 (454)
261 PRK12381 bifunctional succinyl 99.9 1.6E-20 3.6E-25 179.4 30.9 286 42-373 81-400 (406)
262 COG2008 GLY1 Threonine aldolas 99.9 1.3E-20 2.8E-25 167.4 27.8 316 18-370 10-341 (342)
263 PLN02509 cystathionine beta-ly 99.9 5.7E-21 1.2E-25 182.6 27.4 285 42-371 133-460 (464)
264 PRK07582 cystathionine gamma-l 99.9 7.3E-21 1.6E-25 178.8 27.7 280 40-371 49-364 (366)
265 PRK07049 methionine gamma-lyas 99.9 6.1E-21 1.3E-25 182.3 27.3 294 42-371 83-425 (427)
266 PRK07671 cystathionine beta-ly 99.9 4.9E-21 1.1E-25 180.5 26.2 213 41-292 49-266 (377)
267 PRK08117 4-aminobutyrate amino 99.9 1.8E-20 4E-25 180.5 29.4 302 41-373 85-430 (433)
268 PLN00144 acetylornithine trans 99.9 3.3E-20 7.2E-25 175.4 30.5 287 42-373 57-381 (382)
269 PRK05613 O-acetylhomoserine am 99.9 1.1E-20 2.4E-25 180.2 27.3 164 40-217 67-234 (437)
270 PRK06702 O-acetylhomoserine am 99.9 1.4E-20 2.9E-25 178.4 27.7 308 41-372 60-424 (432)
271 PRK07812 O-acetylhomoserine am 99.9 9.4E-21 2E-25 180.5 26.8 304 41-372 68-431 (436)
272 PRK05939 hypothetical protein; 99.9 1.2E-20 2.6E-25 178.5 27.0 159 41-214 46-206 (397)
273 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 2.1E-20 4.5E-25 178.8 28.8 162 40-216 55-219 (418)
274 PRK05994 O-acetylhomoserine am 99.9 2.5E-20 5.4E-25 178.3 28.8 158 42-214 63-223 (427)
275 PRK02936 argD acetylornithine 99.9 3E-20 6.5E-25 176.5 28.7 308 15-370 45-377 (377)
276 TIGR03531 selenium_SpcS O-phos 99.9 6E-20 1.3E-24 173.7 29.7 300 40-369 103-443 (444)
277 TIGR03372 putres_am_tran putre 99.9 5.4E-20 1.2E-24 175.7 29.2 296 41-370 116-442 (442)
278 PRK11522 putrescine--2-oxoglut 99.9 5.8E-20 1.3E-24 176.7 29.2 305 41-374 123-453 (459)
279 PRK06084 O-acetylhomoserine am 99.9 1.8E-20 4E-25 178.7 25.5 305 41-372 57-422 (425)
280 PRK07269 cystathionine gamma-s 99.9 1.1E-20 2.4E-25 177.0 23.2 228 41-313 53-287 (364)
281 PRK08360 4-aminobutyrate amino 99.9 1.6E-19 3.5E-24 173.4 31.2 330 10-373 52-427 (443)
282 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 4E-20 8.8E-25 172.8 26.0 290 39-371 52-386 (386)
283 PRK06058 4-aminobutyrate amino 99.9 3E-19 6.5E-24 172.1 32.2 300 41-373 98-443 (443)
284 PRK09792 4-aminobutyrate trans 99.9 1.3E-19 2.9E-24 173.4 29.2 300 42-371 83-420 (421)
285 PF00282 Pyridoxal_deC: Pyrido 99.9 3.7E-20 8E-25 173.5 24.8 297 9-313 41-372 (373)
286 TIGR02407 ectoine_ectB diamino 99.9 2E-19 4.3E-24 171.7 30.0 323 19-372 51-412 (412)
287 PLN02760 4-aminobutyrate:pyruv 99.9 3.3E-19 7.2E-24 173.0 31.6 306 41-373 132-492 (504)
288 TIGR00700 GABAtrnsam 4-aminobu 99.9 3.1E-19 6.7E-24 171.2 30.7 300 42-371 76-419 (420)
289 PRK07495 4-aminobutyrate amino 99.9 5.3E-19 1.1E-23 169.1 31.9 303 41-373 82-422 (425)
290 KOG1368 Threonine aldolase [Am 99.9 7.3E-20 1.6E-24 156.7 22.7 321 17-373 31-370 (384)
291 PRK06173 adenosylmethionine--8 99.9 4.8E-19 1E-23 169.2 30.5 325 19-373 60-426 (429)
292 PRK08593 4-aminobutyrate amino 99.9 8.6E-19 1.9E-23 168.6 32.1 322 20-373 59-430 (445)
293 PRK06777 4-aminobutyrate amino 99.9 8E-19 1.7E-23 168.0 31.7 299 42-371 83-420 (421)
294 TIGR00713 hemL glutamate-1-sem 99.9 2.4E-19 5.2E-24 172.7 28.1 319 19-373 64-423 (423)
295 PRK06062 hypothetical protein; 99.9 1.1E-18 2.5E-23 167.9 31.9 321 21-373 71-446 (451)
296 PRK09264 diaminobutyrate--2-ox 99.9 1.2E-18 2.6E-23 167.1 31.6 303 42-373 82-417 (425)
297 PRK04260 acetylornithine amino 99.9 2.4E-19 5.2E-24 170.0 26.5 307 21-369 46-374 (375)
298 PRK07986 adenosylmethionine--8 99.9 9.6E-19 2.1E-23 167.0 29.9 324 19-372 59-423 (428)
299 PRK06943 adenosylmethionine--8 99.9 1.2E-18 2.6E-23 167.6 30.7 304 41-373 96-447 (453)
300 PRK03715 argD acetylornithine 99.9 5.6E-19 1.2E-23 167.6 27.9 311 21-373 54-394 (395)
301 PRK09221 beta alanine--pyruvat 99.9 1.7E-18 3.7E-23 166.4 31.5 305 42-373 92-444 (445)
302 PRK06105 aminotransferase; Pro 99.9 8E-19 1.7E-23 169.4 29.2 306 41-373 91-450 (460)
303 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 4.3E-20 9.3E-25 171.7 19.3 272 40-337 64-400 (417)
304 TIGR02618 tyr_phenol_ly tyrosi 99.9 2.4E-18 5.2E-23 160.6 30.7 303 41-372 70-426 (450)
305 PRK05965 hypothetical protein; 99.9 3E-18 6.4E-23 165.4 32.4 335 21-381 64-456 (459)
306 PRK06541 hypothetical protein; 99.9 1.7E-18 3.7E-23 166.9 30.4 304 42-373 95-456 (460)
307 cd01494 AAT_I Aspartate aminot 99.8 3.9E-20 8.5E-25 155.2 16.6 164 44-215 2-170 (170)
308 PRK04612 argD acetylornithine 99.8 1.3E-18 2.7E-23 165.6 28.8 314 19-373 56-404 (408)
309 PRK07482 hypothetical protein; 99.8 1.9E-18 4.1E-23 166.8 30.3 308 41-373 93-455 (461)
310 PRK13360 omega amino acid--pyr 99.8 4.7E-18 1E-22 163.2 32.5 328 19-373 62-441 (442)
311 PRK05769 4-aminobutyrate amino 99.8 3.2E-18 7E-23 164.4 31.1 299 41-373 96-440 (441)
312 COG0626 MetC Cystathionine bet 99.8 2E-18 4.3E-23 159.4 27.9 291 42-373 63-395 (396)
313 PRK05639 4-aminobutyrate amino 99.8 4.2E-18 9.1E-23 163.9 31.4 300 42-373 96-444 (457)
314 PRK08088 4-aminobutyrate amino 99.8 3.7E-18 8.1E-23 164.1 31.1 302 43-373 85-424 (425)
315 COG0001 HemL Glutamate-1-semia 99.8 3E-18 6.4E-23 157.2 28.2 321 10-373 64-429 (432)
316 PRK06434 cystathionine gamma-l 99.8 5.4E-19 1.2E-23 165.8 24.0 282 40-371 62-383 (384)
317 PRK06918 4-aminobutyrate amino 99.8 4.6E-18 9.9E-23 164.4 30.9 303 41-373 96-444 (451)
318 PRK15029 arginine decarboxylas 99.8 3.2E-18 6.8E-23 170.5 30.2 302 40-371 203-603 (755)
319 TIGR00709 dat 2,4-diaminobutyr 99.8 6.9E-18 1.5E-22 162.5 30.7 324 19-373 55-436 (442)
320 PRK07030 adenosylmethionine--8 99.8 9.3E-18 2E-22 161.9 31.5 304 41-373 89-447 (466)
321 PRK07678 aminotransferase; Val 99.8 8.9E-18 1.9E-22 161.9 30.9 307 42-373 89-450 (451)
322 TIGR00508 bioA adenosylmethion 99.8 6.4E-18 1.4E-22 161.8 29.6 324 19-372 61-426 (427)
323 PRK05630 adenosylmethionine--8 99.8 7.2E-18 1.6E-22 161.0 29.2 299 42-372 83-420 (422)
324 PRK06917 hypothetical protein; 99.8 2E-17 4.3E-22 159.1 32.1 307 41-373 73-438 (447)
325 PRK07483 hypothetical protein; 99.8 1.2E-17 2.6E-22 160.5 30.5 339 10-373 41-438 (443)
326 PRK08742 adenosylmethionine--8 99.8 1.1E-17 2.4E-22 161.3 30.3 326 19-373 80-468 (472)
327 PRK13237 tyrosine phenol-lyase 99.8 2.6E-17 5.7E-22 154.1 30.6 302 42-372 78-433 (460)
328 COG2873 MET17 O-acetylhomoseri 99.8 3.8E-18 8.3E-23 151.0 23.4 306 42-371 62-424 (426)
329 PRK06916 adenosylmethionine--8 99.8 2E-17 4.3E-22 159.7 30.7 326 19-373 72-456 (460)
330 PRK07481 hypothetical protein; 99.8 2.2E-17 4.7E-22 159.1 30.7 308 42-375 86-448 (449)
331 COG0161 BioA Adenosylmethionin 99.8 8.8E-18 1.9E-22 156.0 26.7 339 7-373 42-444 (449)
332 PRK06938 diaminobutyrate--2-ox 99.8 2.1E-17 4.6E-22 159.3 30.3 324 19-373 79-461 (464)
333 PRK06082 4-aminobutyrate amino 99.8 3.7E-17 8E-22 157.7 31.6 318 20-373 88-452 (459)
334 PRK00062 glutamate-1-semialdeh 99.8 1.2E-17 2.6E-22 160.4 27.1 318 14-373 65-425 (426)
335 PRK00615 glutamate-1-semialdeh 99.8 2.1E-17 4.5E-22 157.9 28.2 293 42-373 93-429 (433)
336 PRK07036 hypothetical protein; 99.8 4.7E-17 1E-21 157.2 30.8 304 42-373 95-453 (466)
337 PRK12403 putative aminotransfe 99.8 7.1E-17 1.5E-21 155.9 31.9 323 20-373 71-453 (460)
338 PRK04013 argD acetylornithine/ 99.8 2E-17 4.3E-22 154.5 26.5 275 41-372 65-360 (364)
339 PRK13578 ornithine decarboxyla 99.8 3E-17 6.5E-22 161.9 28.6 309 41-371 173-564 (720)
340 KOG0053 Cystathionine beta-lya 99.8 1.1E-17 2.4E-22 152.4 23.5 213 42-292 77-294 (409)
341 KOG1357 Serine palmitoyltransf 99.8 4E-18 8.7E-23 154.0 19.8 328 13-375 149-505 (519)
342 KOG1383 Glutamate decarboxylas 99.8 1.9E-17 4.2E-22 150.5 24.1 333 38-396 116-470 (491)
343 KOG2467 Glycine/serine hydroxy 99.8 2.7E-17 5.9E-22 144.8 24.1 367 12-396 44-452 (477)
344 PRK06149 hypothetical protein; 99.8 4.3E-17 9.3E-22 170.6 30.1 301 42-372 624-970 (972)
345 KOG1402 Ornithine aminotransfe 99.8 3.5E-17 7.6E-22 142.2 24.3 313 17-371 73-426 (427)
346 PRK12389 glutamate-1-semialdeh 99.8 6.8E-17 1.5E-21 155.1 29.0 311 21-372 71-427 (428)
347 TIGR00461 gcvP glycine dehydro 99.8 5.6E-17 1.2E-21 164.0 29.4 318 17-367 75-426 (939)
348 PRK06931 diaminobutyrate--2-ox 99.8 9.7E-17 2.1E-21 154.8 30.0 323 19-372 74-454 (459)
349 PRK07480 putative aminotransfe 99.8 1.1E-16 2.3E-21 154.3 30.1 303 41-373 93-449 (456)
350 PRK15400 lysine decarboxylase 99.8 6.8E-17 1.5E-21 159.3 29.0 299 41-370 194-557 (714)
351 PRK06148 hypothetical protein; 99.8 5.3E-17 1.1E-21 170.0 29.3 339 3-373 626-1011(1013)
352 PLN02482 glutamate-1-semialdeh 99.8 1.9E-16 4E-21 152.6 30.4 291 42-373 139-474 (474)
353 PRK07046 aminotransferase; Val 99.8 1.8E-16 4E-21 152.4 29.8 292 42-373 115-451 (453)
354 PRK15399 lysine decarboxylase 99.8 5.8E-16 1.2E-20 152.8 31.9 299 41-370 194-557 (713)
355 PRK08297 L-lysine aminotransfe 99.8 2E-16 4.4E-21 152.0 28.3 301 42-373 92-442 (443)
356 KOG2790 Phosphoserine aminotra 99.8 7.2E-17 1.6E-21 137.4 20.1 345 4-372 2-368 (370)
357 PF01212 Beta_elim_lyase: Beta 99.8 1.5E-18 3.2E-23 156.4 9.2 251 20-298 7-276 (290)
358 TIGR03811 tyr_de_CO2_Ent tyros 99.8 7.2E-16 1.6E-20 151.0 28.5 282 7-293 83-476 (608)
359 KOG1404 Alanine-glyoxylate ami 99.8 3.5E-16 7.6E-21 139.3 23.7 320 18-366 65-432 (442)
360 TIGR03251 LAT_fam L-lysine 6-t 99.8 7.4E-16 1.6E-20 148.0 28.1 294 42-368 85-430 (431)
361 KOG0633 Histidinol phosphate a 99.8 1.3E-16 2.8E-21 134.4 19.5 274 61-369 87-374 (375)
362 KOG0629 Glutamate decarboxylas 99.8 8.3E-17 1.8E-21 144.5 18.4 316 40-369 139-506 (510)
363 COG1003 GcvP Glycine cleavage 99.7 1.1E-15 2.3E-20 138.1 25.3 319 40-375 107-450 (496)
364 TIGR00699 GABAtrns_euk 4-amino 99.7 1.1E-15 2.5E-20 146.3 25.1 275 61-370 123-464 (464)
365 KOG1401 Acetylornithine aminot 99.7 3.8E-15 8.2E-20 133.7 26.0 338 3-373 58-431 (433)
366 COG3977 Alanine-alpha-ketoisov 99.7 3.7E-15 8.1E-20 128.2 24.6 293 40-373 76-412 (417)
367 PF02347 GDC-P: Glycine cleava 99.7 3.8E-15 8.3E-20 138.7 26.2 299 40-366 108-429 (429)
368 KOG3846 L-kynurenine hydrolase 99.7 4.5E-15 9.8E-20 128.0 23.6 354 9-373 68-462 (465)
369 COG1982 LdcC Arginine/lysine/o 99.7 1.4E-14 3.1E-19 137.4 27.2 301 42-367 70-403 (557)
370 PLN02974 adenosylmethionine-8- 99.7 1.9E-14 4.1E-19 145.8 28.5 326 20-370 383-816 (817)
371 PF06838 Met_gamma_lyase: Meth 99.7 2.4E-14 5.2E-19 127.5 25.4 274 22-326 27-327 (403)
372 COG0403 GcvP Glycine cleavage 99.7 4E-14 8.6E-19 128.2 26.5 324 17-369 86-447 (450)
373 PRK06209 glutamate-1-semialdeh 99.7 9.1E-15 2E-19 140.5 23.8 291 44-373 90-406 (431)
374 PF12897 Aminotran_MocR: Alani 99.7 1.2E-13 2.6E-18 123.9 28.1 299 39-371 66-414 (425)
375 TIGR02617 tnaA_trp_ase tryptop 99.6 1.7E-12 3.7E-17 120.5 26.5 323 19-372 54-441 (467)
376 PF00202 Aminotran_3: Aminotra 99.6 2E-13 4.4E-18 127.0 20.8 227 40-292 57-316 (339)
377 COG4100 Cystathionine beta-lya 99.6 4.5E-13 9.7E-18 115.5 19.3 282 22-327 38-342 (416)
378 PRK12566 glycine dehydrogenase 99.5 4.3E-12 9.3E-17 128.2 27.1 313 17-367 90-439 (954)
379 COG1448 TyrB Aspartate/tyrosin 99.5 7.8E-12 1.7E-16 112.2 25.1 323 9-369 34-395 (396)
380 KOG0258 Alanine aminotransfera 99.5 5.1E-12 1.1E-16 112.8 21.5 295 41-352 112-454 (475)
381 COG1921 SelA Selenocysteine sy 99.5 4.4E-12 9.6E-17 115.5 19.9 223 16-269 35-272 (395)
382 PF05889 SLA_LP_auto_ag: Solub 99.5 4.1E-12 8.9E-17 115.7 17.1 298 44-371 58-389 (389)
383 KOG0628 Aromatic-L-amino-acid/ 99.4 1.1E-10 2.5E-15 106.6 25.3 267 87-372 185-471 (511)
384 KOG1358 Serine palmitoyltransf 99.4 1.9E-11 4.2E-16 109.3 19.8 330 6-372 99-465 (467)
385 PF03841 SelA: L-seryl-tRNA se 99.4 3.5E-13 7.5E-18 121.7 7.4 222 16-268 14-261 (367)
386 COG3033 TnaA Tryptophanase [Am 99.3 1.4E-09 3E-14 96.6 25.0 330 13-372 53-444 (471)
387 KOG1403 Predicted alanine-glyo 99.3 4.2E-10 9E-15 97.4 19.5 345 2-373 39-438 (452)
388 KOG2040 Glycine dehydrogenase 99.2 1.5E-09 3.2E-14 103.1 20.0 319 39-373 579-919 (1001)
389 KOG2040 Glycine dehydrogenase 99.0 3.8E-08 8.3E-13 93.7 19.6 290 44-367 165-478 (1001)
390 PF04864 Alliinase_C: Allinase 98.9 2.1E-07 4.5E-12 83.2 19.2 282 45-368 46-361 (363)
391 KOG1412 Aspartate aminotransfe 98.5 0.00012 2.5E-09 64.6 22.8 270 64-374 103-407 (410)
392 KOG1405 4-aminobutyrate aminot 98.4 2.6E-05 5.7E-10 69.7 17.9 214 123-372 255-483 (484)
393 KOG1411 Aspartate aminotransfe 98.4 2.4E-05 5.2E-10 69.8 16.5 323 9-371 60-424 (427)
394 PLN02994 1-aminocyclopropane-1 97.6 0.00025 5.4E-09 57.7 7.6 55 41-95 95-152 (153)
395 KOG3843 Predicted serine hydro 96.4 0.14 3E-06 44.6 13.3 173 44-225 59-250 (432)
396 PF02310 B12-binding: B12 bind 87.3 5.6 0.00012 30.5 8.6 89 99-197 20-110 (121)
397 COG0552 FtsY Signal recognitio 85.3 30 0.00066 31.9 13.0 135 71-217 154-309 (340)
398 COG1105 FruK Fructose-1-phosph 84.7 9.6 0.00021 34.8 9.6 112 63-178 31-168 (310)
399 COG1066 Sms Predicted ATP-depe 82.0 14 0.0003 35.1 9.7 95 73-175 110-216 (456)
400 PRK11889 flhF flagellar biosyn 81.5 51 0.0011 31.6 14.1 131 41-178 217-362 (436)
401 KOG4589 Cell division protein 77.2 18 0.00039 30.3 7.8 44 122-165 121-165 (232)
402 COG1184 GCD2 Translation initi 73.8 66 0.0014 29.3 11.3 119 43-175 101-227 (301)
403 cd02067 B12-binding B12 bindin 73.3 32 0.0007 26.3 8.3 90 99-198 19-109 (119)
404 TIGR02026 BchE magnesium-proto 72.3 30 0.00065 34.3 9.8 73 101-180 30-103 (497)
405 cd02070 corrinoid_protein_B12- 71.4 64 0.0014 27.5 10.6 125 41-177 32-173 (201)
406 PF05378 Hydant_A_N: Hydantoin 70.5 60 0.0013 27.1 9.8 120 39-165 34-174 (176)
407 PRK00394 transcription factor; 69.6 66 0.0014 26.9 10.5 92 283-375 73-177 (179)
408 TIGR03573 WbuX N-acetyl sugar 68.0 72 0.0016 29.9 10.8 125 40-179 38-170 (343)
409 TIGR01470 cysG_Nterm siroheme 67.3 39 0.00085 29.0 8.2 113 62-198 11-125 (205)
410 PF00289 CPSase_L_chain: Carba 67.1 29 0.00064 26.3 6.6 72 85-169 3-74 (110)
411 COG2101 SPT15 TATA-box binding 65.2 78 0.0017 26.1 9.2 26 350-375 159-184 (185)
412 PF05368 NmrA: NmrA-like famil 63.8 34 0.00074 29.7 7.5 93 64-170 3-95 (233)
413 PLN02476 O-methyltransferase 62.5 1.2E+02 0.0026 27.4 12.1 125 42-181 104-233 (278)
414 COG1648 CysG Siroheme synthase 62.5 97 0.0021 26.7 9.7 116 62-201 14-131 (210)
415 COG0514 RecQ Superfamily II DN 62.0 57 0.0012 32.8 9.2 114 53-180 28-143 (590)
416 COG1954 GlpP Glycerol-3-phosph 60.5 12 0.00027 30.6 3.6 51 122-181 12-62 (181)
417 COG2870 RfaE ADP-heptose synth 60.4 25 0.00055 33.2 6.0 63 109-176 115-178 (467)
418 PF01596 Methyltransf_3: O-met 60.3 1.1E+02 0.0024 26.2 12.2 127 40-181 29-160 (205)
419 PRK05562 precorrin-2 dehydroge 59.2 1.1E+02 0.0024 26.6 9.5 113 62-198 27-141 (223)
420 KOG1663 O-methyltransferase [S 58.6 1.3E+02 0.0027 26.3 13.3 152 17-181 34-188 (237)
421 COG0159 TrpA Tryptophan syntha 56.8 1.2E+02 0.0027 27.0 9.5 74 85-165 124-202 (265)
422 PRK09722 allulose-6-phosphate 56.4 1.4E+02 0.003 26.2 9.7 95 97-199 98-198 (229)
423 cd01121 Sms Sms (bacterial rad 56.4 99 0.0021 29.3 9.5 89 79-174 105-205 (372)
424 cd04518 TBP_archaea archaeal T 56.2 1.2E+02 0.0026 25.3 9.8 86 284-372 75-173 (174)
425 KOG0630 Predicted pyridoxal-de 56.2 70 0.0015 31.1 8.2 87 87-176 234-330 (838)
426 PRK12724 flagellar biosynthesi 52.7 2.3E+02 0.0049 27.5 12.9 89 81-179 249-345 (432)
427 PF08734 GYD: GYD domain; Int 51.8 68 0.0015 23.4 6.1 79 270-363 11-90 (91)
428 COG0616 SppA Periplasmic serin 51.4 59 0.0013 30.1 7.0 96 122-224 81-179 (317)
429 CHL00200 trpA tryptophan synth 50.3 1.8E+02 0.0039 26.1 9.7 83 85-175 121-208 (263)
430 COG0031 CysK Cysteine synthase 50.1 64 0.0014 29.4 6.8 87 58-150 60-149 (300)
431 COG0541 Ffh Signal recognition 50.1 2.5E+02 0.0054 27.2 13.2 130 41-178 72-224 (451)
432 PF00448 SRP54: SRP54-type pro 48.9 83 0.0018 26.7 7.1 92 84-179 29-126 (196)
433 TIGR00322 diphth2_R diphthamid 48.6 80 0.0017 29.4 7.4 80 119-204 3-84 (332)
434 PRK12723 flagellar biosynthesi 48.5 2.5E+02 0.0055 26.8 14.3 88 83-179 205-298 (388)
435 COG0300 DltE Short-chain dehyd 47.3 1.5E+02 0.0032 26.7 8.5 98 64-164 9-113 (265)
436 COG3870 Uncharacterized protei 44.9 1.3E+02 0.0027 22.3 6.5 53 315-372 9-66 (109)
437 PF01972 SDH_sah: Serine dehyd 44.6 68 0.0015 28.8 5.9 76 122-204 76-152 (285)
438 PF10087 DUF2325: Uncharacteri 43.2 1.3E+02 0.0028 22.0 6.7 63 99-175 15-81 (97)
439 COG2515 Acd 1-aminocyclopropan 42.8 2.7E+02 0.0058 25.5 11.0 159 2-165 2-177 (323)
440 PRK13397 3-deoxy-7-phosphohept 42.8 58 0.0013 28.9 5.3 70 109-182 123-197 (250)
441 KOG1201 Hydroxysteroid 17-beta 42.7 1.9E+02 0.0041 26.4 8.4 148 61-216 39-190 (300)
442 TIGR01501 MthylAspMutase methy 42.1 1.7E+02 0.0038 23.1 8.0 70 99-177 21-91 (134)
443 PF01152 Bac_globin: Bacterial 41.9 24 0.00053 27.0 2.6 41 353-393 76-116 (120)
444 PF03147 FDX-ACB: Ferredoxin-f 41.0 1.4E+02 0.003 21.7 7.4 68 309-376 10-92 (94)
445 PRK13396 3-deoxy-7-phosphohept 40.3 78 0.0017 29.7 6.0 121 49-182 158-284 (352)
446 cd00652 TBP_TLF TATA box bindi 40.0 2.2E+02 0.0047 23.7 10.7 86 284-371 75-173 (174)
447 PF04016 DUF364: Domain of unk 39.8 1.6E+02 0.0035 23.6 7.1 80 81-174 8-94 (147)
448 TIGR00272 DPH2 diphthamide bio 39.2 1.1E+02 0.0025 30.2 7.2 78 121-204 37-119 (496)
449 PF00106 adh_short: short chai 38.3 1.9E+02 0.0042 23.0 7.7 100 63-165 3-110 (167)
450 TIGR00416 sms DNA repair prote 37.6 2.1E+02 0.0045 28.1 8.7 87 80-173 118-216 (454)
451 COG0505 CarA Carbamoylphosphat 37.5 2.3E+02 0.005 26.5 8.3 70 84-165 179-249 (368)
452 PRK08091 ribulose-phosphate 3- 37.4 2.8E+02 0.0061 24.2 9.4 92 99-198 108-207 (228)
453 PLN02788 phenylalanine-tRNA sy 37.3 2.9E+02 0.0063 26.5 9.3 81 294-376 307-400 (402)
454 PF04309 G3P_antiterm: Glycero 37.1 9.4 0.0002 31.7 -0.4 72 137-225 19-90 (175)
455 PF00290 Trp_syntA: Tryptophan 36.7 3.1E+02 0.0068 24.5 9.2 74 85-165 117-195 (259)
456 PRK11823 DNA repair protein Ra 36.7 2.3E+02 0.005 27.6 8.9 86 82-174 106-203 (446)
457 PF13407 Peripla_BP_4: Peripla 36.7 1.8E+02 0.0039 25.3 7.8 65 99-174 20-85 (257)
458 PLN02683 pyruvate dehydrogenas 36.3 1.5E+02 0.0032 28.0 7.3 24 154-179 268-291 (356)
459 PRK02261 methylaspartate mutas 35.8 2.2E+02 0.0048 22.5 9.3 70 99-177 23-93 (137)
460 PRK13689 hypothetical protein; 35.7 1.3E+02 0.0028 20.9 4.8 42 354-395 7-50 (75)
461 TIGR01362 KDO8P_synth 3-deoxy- 35.6 74 0.0016 28.2 4.7 66 109-180 117-186 (258)
462 TIGR00649 MG423 conserved hypo 35.5 3.9E+02 0.0085 25.7 10.3 75 82-165 317-398 (422)
463 PRK05703 flhF flagellar biosyn 34.8 4.3E+02 0.0094 25.6 13.3 90 81-179 248-343 (424)
464 CHL00144 odpB pyruvate dehydro 34.7 1.5E+02 0.0033 27.5 7.0 24 154-179 241-264 (327)
465 cd02069 methionine_synthase_B1 33.2 3.2E+02 0.0069 23.6 9.1 70 99-177 108-177 (213)
466 PF02571 CbiJ: Precorrin-6x re 32.6 40 0.00087 29.9 2.7 26 63-90 3-28 (249)
467 PRK08462 biotin carboxylase; V 32.5 2.9E+02 0.0063 26.8 9.0 43 121-173 63-105 (445)
468 cd02072 Glm_B12_BD B12 binding 32.5 2.5E+02 0.0053 22.1 8.2 71 99-178 19-90 (128)
469 PF06153 DUF970: Protein of un 32.3 77 0.0017 24.0 3.8 51 317-372 11-66 (109)
470 PTZ00182 3-methyl-2-oxobutanat 31.4 2E+02 0.0044 27.0 7.3 26 154-181 273-298 (355)
471 PF12683 DUF3798: Protein of u 31.1 84 0.0018 28.1 4.4 53 344-396 133-193 (275)
472 cd01979 Pchlide_reductase_N Pc 30.8 4.8E+02 0.01 24.9 10.8 71 41-115 235-307 (396)
473 KOG1371 UDP-glucose 4-epimeras 30.5 2E+02 0.0042 26.7 6.6 68 63-133 5-76 (343)
474 cd00454 Trunc_globin Truncated 30.4 67 0.0014 24.3 3.4 40 353-392 72-111 (116)
475 PLN02591 tryptophan synthase 30.3 3.9E+02 0.0085 23.7 9.5 82 85-174 108-194 (250)
476 TIGR00223 panD L-aspartate-alp 30.1 36 0.00077 26.3 1.7 40 76-120 74-113 (126)
477 PRK09189 uroporphyrinogen-III 30.0 3.7E+02 0.0081 23.3 9.1 11 211-221 203-213 (240)
478 TIGR01389 recQ ATP-dependent D 30.0 6E+02 0.013 25.8 11.3 103 65-181 36-140 (591)
479 PRK08057 cobalt-precorrin-6x r 29.5 47 0.001 29.4 2.6 29 63-92 5-33 (248)
480 PRK06139 short chain dehydroge 29.5 3.6E+02 0.0078 24.9 8.7 80 63-146 9-93 (330)
481 TIGR01305 GMP_reduct_1 guanosi 29.3 4.8E+02 0.01 24.4 10.7 55 119-177 157-220 (343)
482 PRK14974 cell division protein 29.1 4.8E+02 0.01 24.4 14.0 95 80-178 164-264 (336)
483 PF05127 Helicase_RecD: Helica 28.5 56 0.0012 27.3 2.7 30 68-97 9-39 (177)
484 TIGR02990 ectoine_eutA ectoine 28.1 4.2E+02 0.009 23.3 10.8 97 69-174 107-211 (239)
485 KOG2142 Molybdenum cofactor su 28.1 1.6E+02 0.0035 29.8 6.1 265 10-291 22-316 (728)
486 PLN02589 caffeoyl-CoA O-methyl 27.6 4.4E+02 0.0094 23.4 12.5 123 44-181 67-195 (247)
487 TIGR01279 DPOR_bchN light-inde 27.5 5.6E+02 0.012 24.6 11.2 74 41-118 233-308 (407)
488 PLN03013 cysteine synthase 27.2 2.2E+02 0.0048 27.6 6.8 54 62-116 177-230 (429)
489 COG2099 CobK Precorrin-6x redu 27.1 1.2E+02 0.0027 26.8 4.7 27 153-181 52-78 (257)
490 PF06877 RraB: Regulator of ri 27.0 2.6E+02 0.0056 20.6 8.2 85 284-374 8-96 (104)
491 PRK05449 aspartate alpha-decar 27.0 41 0.00088 26.1 1.5 40 76-120 74-113 (126)
492 cd01965 Nitrogenase_MoFe_beta_ 26.7 3E+02 0.0065 26.6 7.9 84 41-126 257-341 (428)
493 PF02603 Hpr_kinase_N: HPr Ser 26.6 86 0.0019 24.5 3.4 47 121-175 65-111 (127)
494 PRK12726 flagellar biosynthesi 26.4 5.9E+02 0.013 24.5 11.6 90 80-176 230-325 (407)
495 PF13460 NAD_binding_10: NADH( 26.4 3E+02 0.0065 22.4 7.0 73 77-165 15-87 (183)
496 PRK07109 short chain dehydroge 26.2 4.6E+02 0.01 24.2 8.8 65 63-131 11-77 (334)
497 COG4982 3-oxoacyl-[acyl-carrie 26.2 4.7E+02 0.01 26.8 8.7 69 63-132 399-475 (866)
498 COG1606 ATP-utilizing enzymes 26.1 1.6E+02 0.0034 26.2 5.1 97 63-179 21-123 (269)
499 TIGR00511 ribulose_e2b2 ribose 26.1 5.1E+02 0.011 23.7 8.9 98 63-175 118-223 (301)
500 TIGR00064 ftsY signal recognit 25.9 4.9E+02 0.011 23.4 13.2 90 80-177 96-201 (272)
No 1
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=1.7e-54 Score=412.46 Aligned_cols=399 Identities=81% Similarity=1.308 Sum_probs=359.0
Q ss_pred CCCCCCCCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 1 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
|+|.+.|+..+||.|||..++++|++++......|+++.+.+.++++++.+++++|.+.++.+++++++|++++.++.++
T Consensus 1 ~~~~~~~~~~~l~~pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 1 MDYVYAPGRNHLFVPGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred CCcccCCCCceeccCCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc
Confidence 89999999999999999999999999999988778888899999999999999999976556899999999999999899
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHH
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVR 160 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~ 160 (401)
+++||+|++++++|++..|...++..|++++.++.+.+..+|++++++.+++++.+++++++++|++|+||.+.|+++|.
T Consensus 81 ~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~ 160 (401)
T PLN02409 81 LSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVR 160 (401)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHH
Confidence 99999999999999998888888999999999998876668999999999863212689999999999999999999999
Q ss_pred HH--hhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 161 KL--LDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 161 ~l--~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
++ |++ +|+++++|++++.|..+++.+++++|++++|+|||+++|+|+|+++++++.++++........++++....
T Consensus 161 ~l~~~~~--~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
T PLN02409 161 KLLDCAQ--HPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYL 238 (401)
T ss_pred HHHhhhc--cCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHH
Confidence 99 999 99999999999999999999999999999999999999999999999999998887655445566776665
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
+..+.|.++++|++...++++.++++++.+.|++++.++..++.+++++.|+++|++++.+.+..+++.++++.+|++.+
T Consensus 239 ~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~ 318 (401)
T PLN02409 239 KFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGID 318 (401)
T ss_pred HHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCC
Confidence 55556655577899999999999999999989999999999999999999998999888754444577788888888888
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHccCCCCC
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNNIPMIP 398 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (401)
..++.+.|.++++|.+..|.....++.+||++.++++++|+..++++++++|+++|.....+.++.++.++|++..|.+|
T Consensus 319 ~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 398 (401)
T PLN02409 319 SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGYPVKLGSGVAAAQAYLQKTTPLIP 398 (401)
T ss_pred HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHhhcCCccc
Confidence 88999999888899999998876788999999999999999999999999999999888888899999999999999999
Q ss_pred CCC
Q 015729 399 SRI 401 (401)
Q Consensus 399 ~~~ 401 (401)
|||
T Consensus 399 ~~~ 401 (401)
T PLN02409 399 SRI 401 (401)
T ss_pred ccC
Confidence 997
No 2
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-54 Score=389.06 Aligned_cols=377 Identities=41% Similarity=0.668 Sum_probs=355.3
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
-.|++|||.++++.|++++.+....|+++.+...+.++.+.+..+++.+..+.++++++||.|+++++.++++|||+|++
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv 85 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLV 85 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEE
Confidence 68999999999999999999999999999999999999999999999986566788999999999999999999999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCC
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~ 169 (401)
..+|.|+..|.++++++|++++.+..+++..+|++++++++++++ .+++++++|..++||.+.|+++|.++|++ +|
T Consensus 86 ~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~--~~~~V~~vH~ETSTGvlnpl~~I~~~~k~--~g 161 (383)
T COG0075 86 VVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDP--DIKAVAVVHNETSTGVLNPLKEIAKAAKE--HG 161 (383)
T ss_pred EeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCC--CccEEEEEeccCcccccCcHHHHHHHHHH--cC
Confidence 999999999999999999999999999988999999999999654 67899999999999999999999999999 99
Q ss_pred cEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 170 ALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 170 ~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
.++|+|+..++|..+++.++||+|+++++++|++++|+|+|++.++++.++.+......++|+++..+.+.++....|++
T Consensus 162 ~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~ 241 (383)
T COG0075 162 ALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPY 241 (383)
T ss_pred CEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999887777889999999988876457899
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (401)
||++..++++.++++.+.++|++++.++++++++.++++++++|++++. ++...++++..+..|++++...+...++++
T Consensus 242 Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~P~g~~~~~~~~~~~~~ 320 (383)
T COG0075 242 TPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKVPEGVDDKKVRRALLKE 320 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEECCCCCCcHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998 666788999999999998876777788888
Q ss_pred CCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHH
Q 015729 330 YNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQ 391 (401)
Q Consensus 330 ~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 391 (401)
+|+.+..|..+..++.+||++.++.+.+|+..++.+|+.+|.++|.....++++++|..-|.
T Consensus 321 ~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~~~g~~v~aa~~v~~ 382 (383)
T COG0075 321 YGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKVEAGSGVEAAEKVLR 382 (383)
T ss_pred CCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999988764
No 3
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=100.00 E-value=2.2e-48 Score=332.12 Aligned_cols=366 Identities=40% Similarity=0.619 Sum_probs=340.8
Q ss_pred CCCCCCCCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 1 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
||+|+-|.+. ||+|||+.++++|++|+..+...|.++++.+++.++++-+...|.+.++...++.++|+.|+++++.++
T Consensus 10 ~~~m~~p~~~-L~gPGPsnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 10 LDPMYVPVRT-LLGPGPSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL 88 (385)
T ss_pred hccccCCcce-eecCCCcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh
Confidence 7899999999 999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-hHHH
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-LSKV 159 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-l~~i 159 (401)
+.|||+|++...|.++..+...+++.|+++..|+.+.+....++++++++.+ +++++++++|..+.||++.| ++.+
T Consensus 89 lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsq---h~p~~vfv~hgdsSTgV~q~~~~~~ 165 (385)
T KOG2862|consen 89 LEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQ---HKPKAVFVTHGDSSTGVLQDLLAIS 165 (385)
T ss_pred cCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHh---cCCceEEEEecCccccccchHHHHH
Confidence 9999999999999999999999999999999999999988999999999987 67999999999999999999 5668
Q ss_pred HHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC--CccccchHHH
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS--VRVFFDWKDY 237 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~--~~~~~~~~~~ 237 (401)
.++|++ |++++++|.+.++|+.+|..+++++|+....++|.+++|+|++.++.+++..++++..+. ..+|+++...
T Consensus 166 g~lc~k--~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~ 243 (385)
T KOG2862|consen 166 GELCHK--HEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRL 243 (385)
T ss_pred HHHhhc--CCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhh
Confidence 889998 999999999999999999999999999999999999999999999999999999987776 5678888877
Q ss_pred HHHhhcC---CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC
Q 015729 238 IKFYNLG---TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 238 ~~~~~~g---~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
.+++..+ +.|+.|+++..++++.+||+.+.++|+++..++.+++.++++..|+++|++.+..++..+.+++..+.+|
T Consensus 244 ~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp 323 (385)
T KOG2862|consen 244 GNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVP 323 (385)
T ss_pred cchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecC
Confidence 7666544 6789999999999999999999999999999999999999999999999999988877788999999999
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHh
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~ 372 (401)
.++|.+++..+++.++++.+..|..+..++++||+..+ ..+.+-++..++.|+..+++
T Consensus 324 ~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 324 YGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 99999999999999989999888888889999999766 45688999999999888764
No 4
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-44 Score=339.43 Aligned_cols=349 Identities=20% Similarity=0.244 Sum_probs=302.7
Q ss_pred CcccccCCCcCChHHHHHHHccCc-----CCCCCc-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNN-----EDYRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~-----~~~~~~-----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
-.|++.+..++.|..|++++.++. +.+++. ...+.++++|+.+++++|.++.+.|+||.|+|+|++.+..
T Consensus 23 ~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~ 102 (405)
T COG0520 23 LVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVAR 102 (405)
T ss_pred eEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHH
Confidence 479999999999999999999743 223322 2345789999999999999865559999999999999988
Q ss_pred cc---CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 79 NT---LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 79 ~~---~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
++ +++||+|+++..+|+++. |..++++.|++++.++.+.++.++.++++..++ ++||++.+++.+|.||.+
T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~----~~Tklvais~vSn~tG~~ 178 (405)
T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT----PKTKLVALSHVSNVTGTV 178 (405)
T ss_pred HhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC----CCceEEEEECcccccccc
Confidence 77 799999999999999997 888999999999999999888999999999887 467999999999999999
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc-
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF- 232 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~- 232 (401)
.|+++|.++||+ +|+++++|++|+.+..++|++++++|++.+|+|||+.||.|+|++++++++++.+.+........
T Consensus 179 ~pv~~I~~la~~--~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~ 256 (405)
T COG0520 179 NPVKEIAELAHE--HGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIE 256 (405)
T ss_pred chHHHHHHHHHH--cCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCcee
Confidence 999999999999 99999999999999999999999999999999999999999999999999999986655432221
Q ss_pred --------chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc
Q 015729 233 --------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW 303 (401)
Q Consensus 233 --------~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 303 (401)
.+.....+++.|+ +++...+++.+|++++++.|++++.++.+++.+++.+.|.++ ++++..+.+ .
T Consensus 257 ~~~~~~~~~~~~~p~rfe~gT-----pn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~-~ 330 (405)
T COG0520 257 YVSRDEGVTLAELPLRFEAGT-----PNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPD-A 330 (405)
T ss_pred eecccccccccCcchhhccCC-----chHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-c
Confidence 1233456778776 999999999999999999999999999999999999999997 899987654 2
Q ss_pred CCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC--------CcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 304 FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA--------GKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~--------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
....++.|.+ ++++..++.+.|.++ ||.++.|..+-. ...+|+|++.++|++|||+++++|++..+
T Consensus 331 ~r~~~vsF~v-~~~~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 331 DRGGIVSFNV-KGIHPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred cCceEEEEEe-CCCCHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 3446888998 677899999999877 799999976531 12399999999999999999999998764
No 5
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=1.1e-42 Score=327.97 Aligned_cols=355 Identities=47% Similarity=0.749 Sum_probs=294.1
Q ss_pred ccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.+|+|||.++++++++++.+....+++....+...++++.+++++|.+.++.+++++|+|+|+..++.+++++||+|+++
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~ 80 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVG 80 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEe
Confidence 47999999999999999988655566666677799999999999999665557889999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCc
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA 170 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~ 170 (401)
.++|++..+...++..|++++.++.+.++.+|++++++.+++ ++++++++++++|++|.+.|+++|.++|++ +|+
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~---~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~--~~~ 155 (356)
T cd06451 81 VNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQ---HDIKAVTLTHNETSTGVLNPLEGIGALAKK--HDA 155 (356)
T ss_pred cCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhc---cCCCEEEEeccCCCcccccCHHHHHHHHHh--cCC
Confidence 988887555567888999999999887778899999999974 367999999999999999999999999999 999
Q ss_pred EEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhcc-CCCCccccchHHHHHHhhcCCCCCC
Q 015729 171 LFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT-AKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 171 ~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
++++|++|++|..+++....++|++++|+||+++++.|+|++++++++.+.+.. .....++++..........+.++.+
T Consensus 156 ~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (356)
T cd06451 156 LLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPH 235 (356)
T ss_pred EEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCC
Confidence 999999999988777777778999999999999888899999999998877753 1112233333332222222323456
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (401)
++++..++++.++++.+...++++..++..++++++++.|+++|+++..+... ..+.++++.++.+.+..++++.|.++
T Consensus 236 t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (356)
T cd06451 236 TPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPEL-RSPTVTAVLVPEGVDGDEVVRRLMKR 314 (356)
T ss_pred CChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc-CCCceEEEECCCCCCHHHHHHHHHHh
Confidence 78888888999999998888888999999999999999999988877654322 35556677776667888999999877
Q ss_pred CCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 330 YNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 330 ~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+||.+.+|..+..++++|++++.+++++|+++++++|+++++
T Consensus 315 ~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 315 YNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 799999887654567999999998999999999999998763
No 6
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=1.3e-41 Score=321.34 Aligned_cols=354 Identities=21% Similarity=0.296 Sum_probs=294.3
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
+.+||+|||..++++|.+++...+ .++...+.+.++++++.+++++|.++. +.+++++|+|+|++.++.+++.++|++
T Consensus 3 ~~~l~~pgp~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~v 81 (363)
T TIGR02326 3 NYLLLTPGPLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKL 81 (363)
T ss_pred ceeEecCCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeE
Confidence 467899999999999999999977 456677888999999999999999754 458999999999999999998999998
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR 167 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~ 167 (401)
++..+++|+..+...++..|++++.++.+.++.+|++++++++++++ +++++.+++++|+||.+.|+++|.++|++
T Consensus 82 lv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~--~~~~v~~~~~~~~tG~~~~i~~I~~l~~~-- 157 (363)
T TIGR02326 82 LVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADP--AITHIALVHCETTTGILNPIEAVAKLAHR-- 157 (363)
T ss_pred EEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCC--CccEEEEEeecCCccccCcHHHHHHHHHH--
Confidence 88888878776667788899999999998888899999999987643 56788999999999999999999999999
Q ss_pred CCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhc-CCC
Q 015729 168 HPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL-GTF 246 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 246 (401)
+|+++++|++|++|..+++..++++|++++|+||++++++|+|+++++++.++++.... ...+.++...+..+.. ...
T Consensus 158 ~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (363)
T TIGR02326 158 HGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNA-RSLSLDLYDQWRCMEDNHGK 236 (363)
T ss_pred cCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCC-CceeecHHHHHHHHhccCCC
Confidence 99999999999999989998889999999999999999999999999999887765422 2234443333333321 112
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC--CCHHHHH
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH--INSSEIV 323 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ 323 (401)
+.++++...+.++.++++.+... +++++.+++.++++++++.|+++|+++..+. ...++.++++.+|+. .+..++.
T Consensus 237 ~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~ 315 (363)
T TIGR02326 237 WRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDD-EIQSPIITSFYSPEDPDYRFADFY 315 (363)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCc-ccCCceEEEEECCCCCCCCHHHHH
Confidence 34567888899999999988766 4888999999999999999999888876543 224566777888653 5677899
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.|.++ ||.+.+|... ..+++|++++++++.+|+++++++|++++.
T Consensus 316 ~~L~~~-gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 316 QRLKEQ-GFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHHHC-CEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 999866 9999988653 357899998888999999999999998764
No 7
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=5e-41 Score=317.97 Aligned_cols=358 Identities=23% Similarity=0.296 Sum_probs=295.7
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
+.++|+|||..+++.+++++.... .++.+.+.+.+.++++.+++++|.++. ..+++++|+|++++.++.+++.+||+|
T Consensus 5 ~~~~~~pgP~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~v 83 (368)
T PRK13479 5 DPLLLTPGPLTTSRTVREAMLRDW-GSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKV 83 (368)
T ss_pred CceeecCCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeE
Confidence 456899999999999999999876 566666778899999999999998653 457899999999999999999999999
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR 167 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~ 167 (401)
+++.+++++..+...++..|++++.++.+.++.+|++++++.+++++ +++++++++++|+||...|+++|.++|++
T Consensus 84 lv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~--~~~~v~~~~~~~~tG~~~~~~~i~~l~~~-- 159 (368)
T PRK13479 84 LVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADP--RITHVALVHCETTTGILNPLDEIAAVAKR-- 159 (368)
T ss_pred EEEeCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCC--CCcEEEEEcccCccccccCHHHHHHHHHH--
Confidence 99999888876667788899999999998777789999999987543 56789999999999999999999999999
Q ss_pred CCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCC
Q 015729 168 HPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 247 (401)
+|+++|+|+++++|..+++..++++|++++|+||+++|++|+|+++++++.++.+.... ..++.++............+
T Consensus 160 ~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (368)
T PRK13479 160 HGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNS-RSLSLDLYDQWAYMEKTGQW 238 (368)
T ss_pred cCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCC-CCeeecHHHHHhhhcccCCC
Confidence 99999999999999888888888999999999999988999999999999988876543 23344433333222222233
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC--CCHHHHHH
Q 015729 248 PYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH--INSSEIVR 324 (401)
Q Consensus 248 ~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 324 (401)
.++++...++++.++++.+.+. ++++..+++.++++++++.|+++|+++..+. ...++.++.+.++.. .+..++.+
T Consensus 239 ~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 317 (368)
T PRK13479 239 RFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDA-EIQSPIIVTFHAPADPAYDFKEFYE 317 (368)
T ss_pred CCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCc-hhcCceEEEEECCCCCCcCHHHHHH
Confidence 4578888889999999988665 4888889999999999999999998876432 224555676776543 56788999
Q ss_pred HHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 325 RAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.|.++ ||.+.++... ..+.+|+++.++++++|+++++++|+++++++|.
T Consensus 318 ~L~~~-gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~~ 366 (368)
T PRK13479 318 RLKEQ-GFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMGI 366 (368)
T ss_pred HHHHC-CEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 99877 9999877433 2457999988889999999999999999988764
No 8
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=4e-41 Score=318.74 Aligned_cols=344 Identities=24% Similarity=0.344 Sum_probs=286.5
Q ss_pred cccccCCCcCChHHHHHHHccCc----------CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNN----------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~----------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
.||+.+|++++|+.|++++.+.. .++.+..+.+.+.++++.+++++|.++++.+++++|+|.|++.++.+
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 58999999999999999999852 12334557788999999999999998856699999999999999988
Q ss_pred c---CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 80 T---LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 80 ~---~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
+ +++||+|++...+|++.. |...++..|++++.++.+.++.+|++++++.++ ++++++++++.+|.+|...
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~----~~~~lv~~~~~~~~tG~~~ 156 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN----PDTRLVSISHVENSTGVRN 156 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH----TTESEEEEESBETTTTBBS
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc----cccceEEeecccccccEEe
Confidence 8 799999999999999998 777777899999999998888899999999997 4679999999999999999
Q ss_pred chHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccch
Q 015729 155 NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 155 ~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
|+++|.++|++ +|+++++|++|++|..++|++++++|++++|+|| |+||+|+|++++++++.+++.+......+.+.
T Consensus 157 pi~~I~~~~~~--~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~ 233 (371)
T PF00266_consen 157 PIEEIAKLAHE--YGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERLRPAKPGGGYLDF 233 (371)
T ss_dssp SHHHHHHHHHH--TTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTH
T ss_pred eeceehhhhhc--cCCceeEechhccccccccccccccceeeecccc-cCCCCchhhheehhhhhhcccccccccccccc
Confidence 99999999999 9999999999999999999999999999999999 88999999999999999999766554433333
Q ss_pred HHHHHH---hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEE
Q 015729 235 KDYIKF---YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 235 ~~~~~~---~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 310 (401)
...... -....+..+|++...++++..+++.+.+.|++++.++..++.+++.+.|.++ ++.+..++....++.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 313 (371)
T PF00266_consen 234 PSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVS 313 (371)
T ss_dssp HHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEE
T ss_pred ccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEE
Confidence 322111 1112233457999999999999999988889999999999999999999998 666656444456677888
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHH
Q 015729 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGC 362 (401)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~ 362 (401)
+.+ .+.+..++.+.|.++ ||.+..|..+. .++.+|||++.++|++|||++
T Consensus 314 ~~~-~~~~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 314 FNL-PGSDADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEE-TTSSHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred Eee-cCCCHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 988 667889999999988 99999876542 247899999999999999985
No 9
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=4.1e-40 Score=310.57 Aligned_cols=350 Identities=23% Similarity=0.345 Sum_probs=286.6
Q ss_pred cccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 12 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
+|+|||..+++++.+++.. ...++...+.+.+.++++.+++++|.++.+ .+++++|+|+++..++.+++.++|++++.
T Consensus 2 ~~~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~ 80 (355)
T TIGR03301 2 LLTPGPLSTSATVRDAMLV-DWCHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVL 80 (355)
T ss_pred cCcCCCCCCCHHHHHHhhh-hccCCCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEE
Confidence 7999999999999999998 334555566788999999999999998653 57889999999999999988889999988
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCc
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA 170 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~ 170 (401)
.+++|+..+...++..|++++.++.+.++.+|++++++.+++++ +++.+++++++|++|.+.|+++|.++|++ +|+
T Consensus 81 ~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~--~~~~v~~~~~~~~~G~~~~~~~i~~l~~~--~~~ 156 (355)
T TIGR03301 81 INGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADP--DITHVATVHHETTTGILNPLEAIAKVARS--HGA 156 (355)
T ss_pred CCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCC--CceEEEEEecCCcccchhHHHHHHHHHHH--cCC
Confidence 88887765556788899999999988777899999999997643 56788889999999999999999999999 999
Q ss_pred EEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCC
Q 015729 171 LFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (401)
Q Consensus 171 ~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 250 (401)
++|+|+++++|..++++..+++|++++|+||++++++|+|+++++++.++.+... ....++++.....++.....+.++
T Consensus 157 ~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t 235 (355)
T TIGR03301 157 VLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGN-ARSLYLDLYDQWAYMEKTGKWRFT 235 (355)
T ss_pred EEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCC-CCCceeeHHHHHHHhhhcCCCCCC
Confidence 9999999999888888888899999999999998889999999999998887642 223334443333333322234567
Q ss_pred CcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC--CCHHHHHHHHH
Q 015729 251 PSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH--INSSEIVRRAW 327 (401)
Q Consensus 251 ~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~ 327 (401)
++...++++.++++.+.++| +++..++++++++++++.|+++|+++..+.. ...+.++++.+|.. .+..++.+.|.
T Consensus 236 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 314 (355)
T TIGR03301 236 PPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPER-WQSPIIVSFLYPDDPDFDFDDFYQELK 314 (355)
T ss_pred CcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCC-CCCCcEEEEECCCCCcchHHHHHHHHH
Confidence 88888899999999988776 8889999999999999999988887654322 23445677887643 35568899998
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 328 ~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++ ||.+.++.... .+++||+++++++++|+++++++|++++
T Consensus 315 ~~-gi~i~~~~~~~-~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 315 ER-GFVIYPGKLTL-ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred HC-CEEEECCcccc-ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 76 99998885433 3689999988899999999999998753
No 10
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.1e-39 Score=311.72 Aligned_cols=348 Identities=17% Similarity=0.184 Sum_probs=283.2
Q ss_pred CCcccccCCCcCChHHHHHHHccCcC-----CCCCc-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNE-----DYRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~-----~~~~~-----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
+..||+.++.+++++.|++++.+... .+++. ...+.+.++|+.+++++|.++++++++++|+|++++.++
T Consensus 16 ~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 16 GTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVA 95 (398)
T ss_pred CeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHH
Confidence 46999999999999999999877532 11111 234567899999999999965556999999999999988
Q ss_pred hcc----CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcc
Q 015729 78 TNT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (401)
Q Consensus 78 ~~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG 151 (401)
.++ +++||+|++++++|++.. |...++..|++++.++.+.++.+|++++++++++ +++++++++++|+||
T Consensus 96 ~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~----~t~lv~i~~~~n~tG 171 (398)
T TIGR03392 96 QSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP----RTRILALGQMSNVTG 171 (398)
T ss_pred HHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc----CceEEEEECcccccc
Confidence 776 589999999999998854 5567788999999999987777899999999974 569999999999999
Q ss_pred cccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
.+.|+++|.++|++ +|+++++|++|+.+..+++....++|++++|+||.+ ||.|+|+++++++.++.+.+.......
T Consensus 172 ~~~~~~~i~~~~~~--~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~~~~~~~~~ 248 (398)
T TIGR03392 172 GCPDLARAITLAHQ--YGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLY-GPTGIGVLYGKTELLEAMPPWQGGGKM 248 (398)
T ss_pred ccCCHHHHHHHHHH--cCCEEEEEhhhhcCCCCCChhhcCCCEEEEeccccc-CCCceEEEEEcHHHHhhCCCeecCCce
Confidence 99999999999999 999999999999888888877788999999999955 788999999999988877543211100
Q ss_pred --------cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 232 --------FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 232 --------~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
+.......+++.| |++...++++.++++++.+.|++++.++..++++++++.|.++ |+.+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~e~G-----T~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~-- 321 (398)
T TIGR03392 249 LSHVSFDGFIPQAVPHRFEAG-----TPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCP-- 321 (398)
T ss_pred EeeccccccccCCChhhccCC-----CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCC--
Confidence 0111223455555 5999999999999999988888889999999999999999887 77765432
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...+++|.++ +.+..++.+.|.++ ||.++.|..+. .++++|+|++.++|++|+++++++|+++++.+
T Consensus 322 --~~~i~~~~~~-~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 322 --GSSLLAFDFA-GVHHSDLAALLAES-GIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred --CCcEEEEEeC-CcCHHHHHHHHHhC-CEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 2346777774 56778899998765 99999886531 24689999999999999999999999988754
No 11
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=2.7e-39 Score=309.40 Aligned_cols=348 Identities=17% Similarity=0.205 Sum_probs=283.0
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCC-----CCC-----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNED-----YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~-----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
+..||+.++.++.++.|++++.+.... +++ ....+.+.++|+.+++++|.++++++++++|+|++++.++
T Consensus 19 ~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~ 98 (401)
T PRK10874 19 AGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVA 98 (401)
T ss_pred ceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHH
Confidence 579999999999999999999875421 111 2245668899999999999955556999999999999988
Q ss_pred hcc----CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcc
Q 015729 78 TNT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (401)
Q Consensus 78 ~~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG 151 (401)
.++ +++||+|++++++|++.. |...++..|++++.++.+.++.+|++++++.+++ +++++++++++|+||
T Consensus 99 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~t~lv~i~~~~n~tG 174 (401)
T PRK10874 99 QSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITP----RTRILALGQMSNVTG 174 (401)
T ss_pred HHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCc----CcEEEEEeCCccccc
Confidence 776 579999999999998864 6667788999999999988778899999999974 569999999999999
Q ss_pred cccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
.+.|+++|.++|++ +|+++|+|++|+.+..+.+....++|++++|+||.+ ||.|+|+++++++.++.+.+.......
T Consensus 175 ~~~~~~~i~~l~~~--~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~~~~~~~~~ 251 (401)
T PRK10874 175 GCPDLARAITLAHQ--AGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLY-GPTGIGVLYGKSELLEAMSPWQGGGKM 251 (401)
T ss_pred CcCCHHHHHHHHHH--cCCEEEEECCcccccccCCchhcCCCEEEEeccccc-CCCccEEEEEchHHHhcCCCeecCCcc
Confidence 99999999999999 999999999999888888887788999999999955 788999999999988876543211110
Q ss_pred --------cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 232 --------FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 232 --------~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
+.......+++.| |++...++++.+|++.+.+.|.+++.++..++++++++.|+++ |+.+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~e~G-----t~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~-- 324 (401)
T PRK10874 252 LTEVSFDGFTPQSAPWRFEAG-----TPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQ-- 324 (401)
T ss_pred eEeeccCccCCCCChhhccCC-----CcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC--
Confidence 0011122345545 5999999999999999988888888999999999999999987 87765432
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...+++|.+ ++.+..++.+.|.++ ||.++.|..+. ..+++|+|+..++|++|+|+++++|+++++.+
T Consensus 325 --~~~i~~~~~-~~~~~~~~~~~L~~~-gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 325 --DSSLLAFDF-AGVHHSDLVTLLAEY-GIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred --CCcEEEEEE-CCcCHHHHHHHHHHC-CcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 224667777 456778898888765 99999876432 14689999999999999999999999988753
No 12
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1.5e-39 Score=311.54 Aligned_cols=348 Identities=18% Similarity=0.189 Sum_probs=281.7
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCC-----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~-----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..||+.++.+++++.|++++.++... +.+ ....+...++|+.+++++|..+++++++++|+|++++.++.
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~ 103 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHH
Confidence 59999999999999999998774421 111 12345688999999999998544569999999999998876
Q ss_pred c----cCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 79 N----TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 79 ~----~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+ .+++||+|+++.++|++.. |...++..|++++.++.+.++.+|++++++++++ +++++++++++|+||.
T Consensus 104 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~t~lv~l~~~~n~tG~ 179 (406)
T PRK09295 104 SWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDE----RTRLLAITHVSNVLGT 179 (406)
T ss_pred HhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCC----CcEEEEEecchhcccc
Confidence 5 5689999999999988764 5667788899999999988888999999999874 5699999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcc--
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV-- 230 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~-- 230 (401)
+.|+++|.++|++ +|+++++|++|+.|..+++...+++|++++|+||. .||.|+|+++++++..+.+.+......
T Consensus 180 ~~~~~~i~~~~~~--~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~~~~~g~~~~ 256 (406)
T PRK09295 180 ENPLAEMIALAHQ--HGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKL-YGPTGIGILYVKEALLQEMPPWEGGGSMI 256 (406)
T ss_pred cCCHHHHHHHHHH--cCCEEEEEcccccCccccCchhcCCCEEEeehhhc-cCCCCcEEEEEchHhHhhCCCcccCCcee
Confidence 9999999999999 99999999999999888888888999999999995 478999999999998777654322110
Q ss_pred -------ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 231 -------FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 231 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
...+.....+++.| |++...++++.+|++.+.+.|++++.++..++.+++++.|.++ |+++..+.
T Consensus 257 ~~~~~~~~~~~~~~~~r~e~G-----T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-- 329 (406)
T PRK09295 257 ATVSLTEGTTWAKAPWRFEAG-----TPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-- 329 (406)
T ss_pred eeeecCCccccCCchhhcCCC-----CccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC--
Confidence 01111222445555 5999999999999999998899999999999999999999887 78777642
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
....++.|.+| +.+..++.+.|. ++||.++.|..+. .++.+|+|++.++|++|+|+++++|+++..-+
T Consensus 330 -~~~~iv~~~~~-~~~~~~~~~~L~-~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~~~ 405 (406)
T PRK09295 330 -NRLGVIAFNLG-KHHAYDVGSFLD-NYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHRLL 405 (406)
T ss_pred -CCceEEEEEEC-CcCHHHHHHHHH-hCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHHHh
Confidence 12357778875 456778888885 4599998875431 13579999999999999999999999876533
No 13
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=2e-39 Score=312.17 Aligned_cols=352 Identities=18% Similarity=0.200 Sum_probs=285.2
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCC-----CC-----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY-----RS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~-----~~-----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..||+.+++.+.++.|++++.++.... .. ....+.+.++|+.+++++|.++++++++++|+|++++.++.
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~ 112 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAY 112 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHH
Confidence 599999999999999999987743211 11 12334578999999999999755569999999999998876
Q ss_pred c----cCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 79 N----TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 79 ~----~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+ .+++||+|+++.++|++.. |..+++..|++++.++.+.++.+|++++++.+++ +++++++++++|+||.
T Consensus 113 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~----~t~lv~i~~~~n~tG~ 188 (424)
T PLN02855 113 TWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE----KTKLVATHHVSNVLGS 188 (424)
T ss_pred HhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc----CceEEEEeCccccccc
Confidence 5 4689999999999988764 6667788899999999887777999999999974 6799999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcc--
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV-- 230 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~-- 230 (401)
+.|+++|.++|++ +|+++++|++|+.+..+++..++++|++++|+|| +.||.|+|+++++++.++++.+......
T Consensus 189 ~~~~~~I~~l~~~--~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~ 265 (424)
T PLN02855 189 ILPVEDIVHWAHA--VGAKVLVDACQSVPHMPVDVQTLGADFLVASSHK-MCGPTGIGFLWGKSDLLESMPPFLGGGEMI 265 (424)
T ss_pred cCCHHHHHHHHHH--cCCEEEEEhhhhcCCcCCCchhcCCCEEEeeccc-ccCCCccEEEEEchhhhhcCCCEecCCCce
Confidence 9999999999999 9999999999999888888888899999999999 4578899999999998887754422110
Q ss_pred ---ccc---hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCC--
Q 015729 231 ---FFD---WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKE-- 301 (401)
Q Consensus 231 ---~~~---~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-- 301 (401)
+.+ +.....+++.| |+++..++++.++++++.+.|++++.++..++.+++++.|+++ |+++..+.+
T Consensus 266 ~~~~~~~~~~~~~~~r~e~G-----T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~ 340 (424)
T PLN02855 266 SDVFLDHSTYAPPPSRFEAG-----TPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSE 340 (424)
T ss_pred eeeecCccccCCChhhccCC-----ChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccc
Confidence 001 11112445555 5999999999999999988899999999999999999999887 888876432
Q ss_pred ccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
......++.|.+| +.+..++.+.|.+++||.++.|..+. ....+|+|++.++|++|+|+++++|+++++.+
T Consensus 341 ~~~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 341 GVGRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred ccCcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHH
Confidence 1123457778884 45778899999876799998775321 13579999999999999999999999988653
No 14
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=3e-38 Score=302.66 Aligned_cols=352 Identities=18% Similarity=0.214 Sum_probs=280.3
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCC-----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~-----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..||+.++.+++++.+++++.+.... +.+ ....+.+.++++.+++++|.++++++++++|+|+++..++.
T Consensus 19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~ 98 (403)
T TIGR01979 19 LVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAY 98 (403)
T ss_pred eEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 49999999999999999998764321 111 12345678999999999999855569999999999998876
Q ss_pred cc----CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 79 NT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 79 ~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
++ +++||+|++++++|++.. |...++..|++++.++.+.++.+|++++++.+++ +++++++++++|+||.
T Consensus 99 ~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~----~~~lv~~~~~~~~tG~ 174 (403)
T TIGR01979 99 SWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTE----KTKLVAITHVSNVLGT 174 (403)
T ss_pred HhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhcc----CCeEEEEEcccccccc
Confidence 53 688999999999988865 5567778899999999988888999999999974 5799999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc-
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF- 231 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~- 231 (401)
+.|+++|.++|++ +|+++|+|++|+.+..+++....++|++++|+||++ |+.|+|+++++++..+.+.+.......
T Consensus 175 ~~~~~~i~~~~~~--~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~~~~~~g~~~~ 251 (403)
T TIGR01979 175 VNPVEEIAKLAHQ--VGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMY-GPTGIGVLYGKEELLEQMPPFLGGGEMI 251 (403)
T ss_pred cCCHHHHHHHHHH--cCCEEEEEchhhcCccccCccccCCCEEEEeccccc-CCCCceEEEEchHHHhcCCCeecCCCce
Confidence 9999999999999 999999999999998888888889999999999976 688999999999987776543211000
Q ss_pred ----c---chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc
Q 015729 232 ----F---DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW 303 (401)
Q Consensus 232 ----~---~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 303 (401)
. .+.....+++.| +++...++++.++++.+.+.|++++.++..++++++++.|+++ |+++..+....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~g-----t~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~ 326 (403)
T TIGR01979 252 AEVSFEETTYNEAPHKFEAG-----TPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAE 326 (403)
T ss_pred eecccCccccCCChhhcCCC-----CccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcc
Confidence 0 000111223333 5888899999999999888888999999999999999999987 88887643222
Q ss_pred CCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 304 FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
....++.|.++ +.+..++.+.|.++ ||.++.|..+ ..++++||++..++|++|+++++++|+++++.+|
T Consensus 327 ~~~~~v~~~~~-~~~~~~~~~~L~~~-gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~~ 403 (403)
T TIGR01979 327 DRGGIISFNVE-GVHPHDVGTILDEE-GIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFFG 403 (403)
T ss_pred ccCceEEEEeC-CcCHHHHHHHHhhC-CEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHhC
Confidence 23456777774 45677888888755 9999876421 1246899999989999999999999999988765
No 15
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=300.67 Aligned_cols=343 Identities=20% Similarity=0.204 Sum_probs=272.4
Q ss_pred ccccCCCcCChHH-HHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEec-CChhHHHHHHHhccCCCCCe
Q 015729 11 HLFVPGPVHIPDQ-VIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIP-TTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 11 ~~~~~~p~~~~~~-v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~a~~~~~~~~~~~gd~ 86 (401)
++|.|||..+++. |++++...... |+++.+.+.+.++++.+++++|.+++++++++ +|+|.+++.++.+++++++.
T Consensus 14 ~~f~~Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~ 93 (378)
T PRK03080 14 PRFSSGPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRV 93 (378)
T ss_pred CCcCCCCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcc
Confidence 5689999999999 99999986654 88888999999999999999998655457776 59999999999998874333
Q ss_pred EEEEcCCcchHHHHH-HHHHcCC-cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhh
Q 015729 87 IISFLIGQFSLLWID-QQQRLNF-NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (401)
Q Consensus 87 vl~~~~~~~~~~~~~-~~~~~g~-~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~ 164 (401)
.++ .++.|+..|.. .+++.|+ +++.++.+.+..+|+++++ . ++.+.++|.+|.||.+.|+++|.+ +
T Consensus 94 ~vi-~~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~----~-----~~~V~~~h~~t~tG~~~pi~~I~~--~ 161 (378)
T PRK03080 94 DHL-AWESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAVD----F-----DRDVVFTWNGTTTGVRVPVARWIG--A 161 (378)
T ss_pred eEE-EeCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhcC----C-----CCCEEEEecCCccceeccchhhcc--c
Confidence 333 35677777765 4467899 9999998877777776532 1 367899999999999999999988 6
Q ss_pred hcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC---ccccchHH---H-
Q 015729 165 EYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV---RVFFDWKD---Y- 237 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~---~~~~~~~~---~- 237 (401)
+ +|+++++|++|++|..++|.++ +|++++|+|||+++|+|+|+++++++.++++.+.... ..++++.. .
T Consensus 162 ~--~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 237 (378)
T PRK03080 162 D--REGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAI 237 (378)
T ss_pred c--CCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHh
Confidence 6 8999999999999999999886 7999999999999899999999999999887654321 12333333 1
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCceeEEEEcCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
...++.+ +++|+++..++++.++++++.+. |++++.++.+++.+++++.|++++ +.+....+..+++.++.|.+|+
T Consensus 238 ~~~~~~~--t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~ 315 (378)
T PRK03080 238 ENSFKGQ--TINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVD 315 (378)
T ss_pred hhhhcCC--cccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCC
Confidence 2234444 37789999999999999999997 799999999999999999999984 6666433333455678888865
Q ss_pred ---CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 316 ---HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 316 ---~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+ .++...|.++ ++.+..|.....++.+|+|++.+++++|+++++++|+++++++
T Consensus 316 ~~~~~~-~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 316 AQAAVD-AAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred chHHHH-HHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 333 3456666666 7887766433235789999999999999999999999988765
No 16
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=4.3e-38 Score=294.16 Aligned_cols=339 Identities=15% Similarity=0.142 Sum_probs=272.7
Q ss_pred CcccccCCCcCChHHHHHHHccCc------------CCCCCccHHHHHHHHHHHHHHHhcCCCCceE-EecCChhHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPF-LIPTTGTGAWES 75 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i-~~~~g~t~a~~~ 75 (401)
+.+||.|||+.+++.|++++.... ..|+++.+.+.+.++++.++++++.+.++++ +++++||.|+++
T Consensus 3 ~~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea 82 (360)
T PRK05355 3 RVYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAM 82 (360)
T ss_pred ceeeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHH
Confidence 578999999999999999998863 3578888999999999999999998543334 556888999999
Q ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHH-HHhccCCCCceEEEEEecCCCcccc
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLAS-KLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~-~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
++.+++.+|++++++..|.|+..|...+++.|.. ..+..+. .+..+..++++ .+++ ++++|.++|.+|+||.+
T Consensus 83 ~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~----~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 83 VPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSD----DAAYVHYTSNETIDGTE 157 (360)
T ss_pred HHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCC----CCCEEEEccCCCcceEe
Confidence 9999999999999999999999999999999975 6666654 33444445555 6653 56999999999999999
Q ss_pred c-chHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 154 N-NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 154 ~-~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
. |+++| +|+++++|+++++|..++|.+++ |++++|+||++ ||+|+|++++++++++++.+.. ..++
T Consensus 158 ~~~i~~i--------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~l-gP~Glg~l~~s~~~l~~~~~~~--~~~~ 224 (360)
T PRK05355 158 FHELPDT--------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNI-GPAGLTIVIVREDLLGRALPSI--PSML 224 (360)
T ss_pred cCccccc--------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccc-cCCceEEEEECHHHHhhcccCC--ChHH
Confidence 8 66655 68999999999999999999875 69999999988 5999999999999998876531 2344
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 311 (401)
++..... ...+++||++..++++.++++++.++ |++++.++.++++++++++|+++++.....++..+++.++.|
T Consensus 225 ~~~~~~~----~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf 300 (360)
T PRK05355 225 DYKTHAD----NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPF 300 (360)
T ss_pred HHHHHHh----cCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEE
Confidence 4433221 22356899999999999999999999 799999999999999999999987422212223367778889
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+|++.+..++...+.++ |+.+..+.. ..+.+|+|++.++|++|||+++++|+++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~-Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 301 TLADEELDKKFLAEAKAA-GLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred EcCChHHHHHHHHHHHHC-CCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 987654445665666544 888765543 2468999999999999999999999998764
No 17
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=1.8e-37 Score=294.77 Aligned_cols=345 Identities=19% Similarity=0.206 Sum_probs=273.3
Q ss_pred cccccCC-CcCChHHHHHHHccCcCC-----CCC-cc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 10 NHLFVPG-PVHIPDQVIRAMNRNNED-----YRS-PA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 10 ~~~~~~~-p~~~~~~v~~a~~~~~~~-----~~~-~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
+||+.++ +.+.|+.+++++.+.... .+. +. ......++++.+++++|.+..+.+++++|+++++..++.
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 4777765 447778888887663221 111 11 236688999999999998765569999999999999998
Q ss_pred ccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 79 NTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
+++++||+|++..++|++.. +...++..|++++.++.+.++.+|++++++++++ +++++++++++||||.+.|+
T Consensus 81 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 81 GLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKT----NTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred hccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCC----CCeEEEEECCCCCccccCCH
Confidence 88999999999988887765 4456777799999999888788899999999863 57999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC-----ccc
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV-----RVF 231 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~-----~~~ 231 (401)
++|.++|++ +|+++|+|++|++|..+++....++|++++|+|||+++|.|+|+++++++. .+.+.... ..+
T Consensus 157 ~~i~~l~~~--~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~~ 232 (376)
T TIGR01977 157 EEIGELAQE--NGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSAL 232 (376)
T ss_pred HHHHHHHHH--cCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCcccccc
Confidence 999999999 999999999999999998888889999999999999989999999988875 12221111 001
Q ss_pred cch-HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeE
Q 015729 232 FDW-KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 232 ~~~-~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 309 (401)
++. .....+++.| |++...++++.++++++.+.|++++.++.+++++++++.|++. |+++..+.+......++
T Consensus 233 ~~~~~~~~~r~~~~-----t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v 307 (376)
T TIGR01977 233 IDQPSELPDRFESG-----TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVV 307 (376)
T ss_pred ccccccchhhccCC-----CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeE
Confidence 110 0111234444 5888889999999999999999999999999999999999976 77776543222334577
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCC----------CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNK----------VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~----------~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
+|.++ +.+..++.+.|.+++||.+..|..+ ...+.+|+++..++|++|+++++++|++
T Consensus 308 ~~~~~-~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 308 SFTVE-GIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEEC-CCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 78884 5578899999987779999887532 1346899999999999999999999975
No 18
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-37 Score=278.24 Aligned_cols=342 Identities=17% Similarity=0.188 Sum_probs=279.1
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCC---------CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY---------RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~---------~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
..|++....+++.++|++++..+.... .+.......++.|+.+++++|.++ +.|+||+|+|++++.++.+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP-EEIIFTSGATESNNLAIKG 80 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC-CeEEEecCCcHHHHHHHHh
Confidence 469999999999999999998854332 122345678899999999999988 4599999999999998876
Q ss_pred c--C----CCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 80 T--L----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 80 ~--~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
. . +.|.+|+++..+|++.. .....+..|.++.+++++.++.+|+++|+++++. ++.+|.+.+.||.+|+
T Consensus 81 ~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~----~T~LVSim~aNnE~G~ 156 (386)
T COG1104 81 AALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRP----DTILVSIMHANNETGT 156 (386)
T ss_pred hHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCC----CceEEEEEecccCeee
Confidence 2 2 25789999999999987 3333477899999999999999999999999985 4589999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+.|+++|.++|++ +++++++|+++++|-.+++....++|++++|+|| |.||.|+|++++++.. ++.+....+..
T Consensus 157 IQpI~ei~~i~k~--~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~--~~~p~i~GGgQ- 230 (386)
T COG1104 157 IQPIAEIGEICKE--RGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGV--RLEPLIHGGGQ- 230 (386)
T ss_pred cccHHHHHHHHHH--cCCeEEEehhhhcCceeccccccCcceEEeehhh-ccCCCceEEEEECCCC--ccCceeccCcC-
Confidence 9999999999999 9999999999999999999999999999999999 5689999999997764 23322211111
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~ 310 (401)
.+.+..| |.+..+++++.+|++...++ ++....+..+++++|.+.|.+. ++.+... +..+.+.++.
T Consensus 231 -----E~g~RsG-----Tenv~~Ivg~~~A~~~a~~~-~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~-~~~rlP~~~~ 298 (386)
T COG1104 231 -----ERGLRSG-----TENVPGIVGFGKAAEIAVEE-LEEENARLRKLRDRLEDGLLEIIPDVYLNGD-DEPRLPNILN 298 (386)
T ss_pred -----CCCCCCC-----CccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcEEEcCC-cccCCCCeEE
Confidence 0223334 59999999999999987664 6788889999999999999975 4554443 2347788899
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCC-------------------cEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAG-------------------KVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~-------------------~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.+ .+++.+.+...|.. .||.+..|+.|..+ ..+|||+...+|++|+|++++++.++++
T Consensus 299 ~~f-~gv~gE~ll~~L~~-~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~ 376 (386)
T COG1104 299 FSF-PGVEGESLLLALDL-AGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIK 376 (386)
T ss_pred EEe-CCCcHHHHHHhccc-cCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 999 56788888888854 49999999775433 3499999999999999999999999998
Q ss_pred hcCC
Q 015729 372 DVGY 375 (401)
Q Consensus 372 ~~~~ 375 (401)
.+..
T Consensus 377 ~lr~ 380 (386)
T COG1104 377 RLRE 380 (386)
T ss_pred HHhh
Confidence 7644
No 19
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=1.9e-37 Score=292.67 Aligned_cols=326 Identities=15% Similarity=0.133 Sum_probs=262.8
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCC----------CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYR----------SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~----------~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
.||+.++++++++.|++++.++...+. +....+.++++++.+++++|.++. .+++++|+|++++.++.+
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFTSGATESNNLAIKG 79 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHH
Confidence 489999999999999999987442211 123356688999999999998754 499999999998877644
Q ss_pred ----cCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 80 ----TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 80 ----~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
+.++||+|+++..+|++.. +.. ....|++++.++.+.++.+|++++++++++ +++++++++++|+||.+
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~----~t~lv~v~~~~n~tG~~ 154 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGFEVTYLPVKSDGLVDLDELAAAIRP----DTALVSVMAVNNEIGVI 154 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCCEEEEEccCCCCcCCHHHHHHhcCC----CcEEEEEECCCCCceec
Confidence 3578999999998888764 433 346799999999888788999999999974 56999999999999999
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
.|+++|.++|++ +|+++++|++|+.|..+++.+++++|++++|+||| +||.|+|+++++++...++.+.......
T Consensus 155 ~~l~~I~~~~~~--~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p~~~g~~~-- 229 (364)
T PLN02651 155 QPVEEIGELCRE--KKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEPLMSGGGQ-- 229 (364)
T ss_pred ccHHHHHHHHHH--cCCEEEEEcchhhCCcccCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCCCCccccCCCc--
Confidence 999999999999 99999999999999999999999999999999997 5899999999999876665543221100
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCC-CccCCceeEE
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQK-EEWFSDTVTA 310 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~~~~~~~~~~ 310 (401)
...+ ..+|++...++++.++++++.+. .+++.++..++.+++++.|.+ + |+++..+. +..+++.++.
T Consensus 230 ----~~~~-----~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~ 299 (364)
T PLN02651 230 ----ERGR-----RSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLN 299 (364)
T ss_pred ----cCCc-----cCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEE
Confidence 0122 24569999999999999998874 588899999999999999986 4 88888753 2234566888
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC-------------------CcEEEEeecccCCHHHHH
Q 015729 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA-------------------GKVFRIGHLGHLNELQLL 360 (401)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~-------------------~~~~Ri~~~~~~~~~di~ 360 (401)
|.++ +.+..++.+.|.+ |.++.|..+.. .+.+|+|+..++|++|||
T Consensus 300 ~~~~-~~~~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 300 LSFA-YVEGESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EEeC-CCCHHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 8884 6788899999853 88877754311 257999999999999985
No 20
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=100.00 E-value=1.2e-36 Score=284.95 Aligned_cols=341 Identities=17% Similarity=0.211 Sum_probs=272.1
Q ss_pred cccCCCcCChHHHHHHHccCc-----CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEec-CChhHHHHHHHhccCCCCC
Q 015729 12 LFVPGPVHIPDQVIRAMNRNN-----EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIP-TTGTGAWESALTNTLSPGD 85 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~-----~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~a~~~~~~~~~~~gd 85 (401)
-|+|||+.+++.|++++.... ..|+++.+.+.+.++++.++++++.++++.++|+ +|+|.+++.++.+++.+
T Consensus 6 ~f~pGP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-- 83 (361)
T TIGR01366 6 RFGSGPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-- 83 (361)
T ss_pred cccCCCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc--
Confidence 589999999999999998752 4688999999999999999999998655557774 77999999999888743
Q ss_pred eEEEEcCCcchHHHHHHHHHc--CCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHh
Q 015729 86 RIISFLIGQFSLLWIDQQQRL--NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~ 163 (401)
+++++..+.|+..+...+... +.++..++.+.+..++.+ +. +++++|.++|.+|.||.+.|+++| +
T Consensus 84 ~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~lV~~~h~et~tG~~~pi~~I---~ 151 (361)
T TIGR01366 84 KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEPQ-----AD----PGVDVIAWAHNETSTGVAVPVRRP---E 151 (361)
T ss_pred cccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCCc-----cC----CCCCEEEEcccCCccceecccccc---c
Confidence 455566688888776666652 237777777655434331 22 478999999999999999999988 4
Q ss_pred hhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC----ccccchHHHHH
Q 015729 164 DEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV----RVFFDWKDYIK 239 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 239 (401)
++ +|+++++|+++++|..++|.++ +|++++|+||++++++|++++++++++++++.+.... ..+.++.....
T Consensus 152 ~~--~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~ 227 (361)
T TIGR01366 152 GS--DDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVD 227 (361)
T ss_pred cc--CCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHh
Confidence 77 9999999999999999999885 8999999999998777888999999999887654322 13445544433
Q ss_pred H-hhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCceeEEEEcCCC
Q 015729 240 F-YNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 240 ~-~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
. ++. .+++|+++..++++.++++++.+. |++.+.++.+++++++++.|.+++ ++++.......+..+..+.++++
T Consensus 228 ~~~~~--~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g 305 (361)
T TIGR01366 228 NSLKN--QTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDD 305 (361)
T ss_pred ccccC--CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCc
Confidence 2 223 348899999999999999999988 599999999999999999999985 56554322223444555666788
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+..++...|.++ ||.+.+++....++.+|+|+.+++|++|+++++++|+++++++
T Consensus 306 ~~~~~v~~~L~~~-gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 306 IDAATVAKILRAN-GIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred cCHHHHHHHHHHC-CCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8899999999766 9999887655556789999999999999999999999988764
No 21
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=1e-36 Score=289.51 Aligned_cols=339 Identities=16% Similarity=0.153 Sum_probs=266.0
Q ss_pred cccccCCCcCChHHHHHHHccCcCC-----CC----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
.||+.++.+++++.|++++.++... +. +....+.++++++.+++++|.++. .+++++|+|++++.++.++
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFTSGGTESDNTAIKSA 79 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHH
Confidence 4899999999999999999874321 11 122356688999999999998754 5999999999999888764
Q ss_pred C---CCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 81 L---SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 81 ~---~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
+ .++|+|++...+|++.. .....+..|++++.++.+.++.+|++++++.+++ +++++++++++|+||.+.|+
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~----~~~lv~i~~~~n~tG~~~~~ 155 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD----DTALVSVMWANNETGTIFPI 155 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC----CcEEEEEEcccCCeeecccH
Confidence 3 45688888888888765 2234455799999999887788999999999974 56999999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
++|.++|++ +|+++++|++|+.|..+++..+.++|++++|+|| +.||.|+|+++++++. .+.+..... ..
T Consensus 156 ~~I~~l~~~--~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~--~~~p~~~g~-~~---- 225 (379)
T TIGR03402 156 EEIGEIAKE--RGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGT--RFRPLLRGG-HQ---- 225 (379)
T ss_pred HHHHHHHHH--cCCEEEEECcccccccccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCC--CCCCcccCC-cc----
Confidence 999999999 9999999999999999999988999999999999 6689999999998764 122211100 00
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEEcC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
....+ .+|++...++++.+++++..+ +++...++..++.+++++.|.+ + ++.+..+... +.+.++.+.+
T Consensus 226 -~~~~~-----~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~- 296 (379)
T TIGR03402 226 -ERGRR-----AGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTK-RLPNTVNISF- 296 (379)
T ss_pred -CCCcC-----CCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCcc-CCCCEEEEEe-
Confidence 01122 446999999999999998876 5788888999999999999985 5 7766553322 3334566666
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCC-------------------CcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNKVA-------------------GKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~~~-------------------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.+..++...|.++ ||.++.|..+.. .+.+|+|++.++|++|||++++.|+++++++
T Consensus 297 ~~~~~~~~~~~l~~~-gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 297 EYIEGEAILLLLDME-GICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred cCCCHHHHHHhhccC-CEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 356778899888654 999998754321 2579999999999999999999999988763
No 22
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=1.3e-36 Score=290.78 Aligned_cols=338 Identities=18% Similarity=0.205 Sum_probs=266.5
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCC-----CCc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY-----RSP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~-----~~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
..|++.+|++++++.+++++.+..... ..+ ...+...++++.+++++|.++++ +++++|+++++..++.+
T Consensus 18 ~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~-v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPE-VVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCe-EEEeCCHHHHHHHHHHH
Confidence 499999999999999999887743211 112 23456789999999999987654 99999999998876655
Q ss_pred ---cCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 80 ---TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 80 ---~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
.+++||+|++..++|++.. |...++..|++++.++.++ ++.+|++++++.+++ +++++++++++|+||.+
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~----~~~lv~i~~~~n~tG~~ 172 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSP----RTRLVAVTAASNTLGSI 172 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCC----CceEEEEeCCCCCCCcc
Confidence 3689999999999988865 5566788899999999876 567899999999873 56999999999999999
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
.|+++|.++|++ +|+++++|++|+.+..+++..++++|++++|+||++ |+. +|+++++++.++.+.+..... .
T Consensus 173 ~~~~~i~~~~~~--~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~-~G~l~~~~~~~~~l~~~~~~~---~ 245 (397)
T TIGR01976 173 VDLAAITELVHA--AGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFF-GPH-MGILWGRPELLMNLPPYKLTF---S 245 (397)
T ss_pred CCHHHHHHHHHH--cCCEEEEehhhhccccCCCHHHcCCCEEEEechhhc-CCc-eEEEEEcHHHHhhCCCccccC---c
Confidence 999999999999 999999999998887777877889999999999987 454 899999999888776543211 1
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc--------------HHHHHHHHHHHHHHHHHHHHHc-CCcccc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG--------------LENVIERHRRLGKATRLAVEAW-GLKNCT 298 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g--------------~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 298 (401)
+.....+++.| |++...++++.++++.+.+.| ++++.++..++.+++++.|+++ ++++..
T Consensus 246 ~~~~~~~~~~g-----t~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 320 (397)
T TIGR01976 246 YDTGPERFELG-----TPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYG 320 (397)
T ss_pred cCCCcchhcCC-----CCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 11122334445 599988999999999987665 5667778888999999999887 477765
Q ss_pred CC-CccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-----------CCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 299 QK-EEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-----------VAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 299 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-----------~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
+. +....+ ++.+.+ .+.+..++.++|.++ ||.++.+..+ ..++++|||++.++|++|+++++++|
T Consensus 321 ~~~~~~~~~-~~~~~~-~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 321 VARLAARVP-TVSFTV-HGLPPQRVVRRLADQ-GIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCCccCCCc-eEEEEe-CCcCHHHHHHHHHHC-CeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 42 222344 566766 445678899999766 9999876332 13468999999999999999999864
No 23
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=100.00 E-value=2.2e-36 Score=280.70 Aligned_cols=339 Identities=19% Similarity=0.210 Sum_probs=280.1
Q ss_pred cccCCCcCChHH-HHHHHccCc--CCCCCccHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHhccC-CCCCe
Q 015729 12 LFVPGPVHIPDQ-VIRAMNRNN--EDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTL-SPGDR 86 (401)
Q Consensus 12 ~~~~~p~~~~~~-v~~a~~~~~--~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~~-~~gd~ 86 (401)
.|+|||+.+.|. .++++++.. .+|+++.+.+++.++++.++++++.+.. +.+++++|||.++++++.+++ ++|++
T Consensus 6 ~f~~gp~~~~~~~~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~ 85 (374)
T TIGR01365 6 CFSSGPCAKRPGWSIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVD 85 (374)
T ss_pred CcCCCccCCCchhhHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCe
Confidence 589999999999 788887632 4589999999999999999999998543 335669999999999999999 58889
Q ss_pred EEEEcCCcchHHHH-HHHHHcCC-cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhh
Q 015729 87 IISFLIGQFSLLWI-DQQQRLNF-NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (401)
Q Consensus 87 vl~~~~~~~~~~~~-~~~~~~g~-~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~ 164 (401)
+++. +.|+..|. ++++..|+ ++..++.+.+..+|+++++. + +.++++|..+.||+..|++++. +
T Consensus 86 vLv~--g~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~-------~~v~~vhnETSTGv~npv~~i~---~ 151 (374)
T TIGR01365 86 VLAW--ESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K-------NDVVFTWNGTTSGVRVPNGDFI---P 151 (374)
T ss_pred EEEE--CHHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C-------CCEEEecCCCchheeccccccc---c
Confidence 8875 68999888 99999999 58888888888889998872 1 2367999999999999997655 3
Q ss_pred hcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHH-----
Q 015729 165 EYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK----- 239 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 239 (401)
+. +++++++|+++++|+.+++.++ +|++++|++|.|++|+|+++++++++.+++...... ++++..+.+
T Consensus 152 ~~-~~~lliVDavSs~g~~~l~~d~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~---y~~~~~~~~~~~~~ 225 (374)
T TIGR01365 152 AD-REGLTICDATSAAFAQDLDYHK--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTP---AWPLPKIFRLTKGG 225 (374)
T ss_pred cc-CCCcEEEEccchhcCCCCChhH--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCC---CCCChhhhcccccc
Confidence 21 4789999999999999998884 999999999999999999999999999988664321 222222211
Q ss_pred ----HhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCceeEEEEc
Q 015729 240 ----FYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 240 ----~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~ 313 (401)
....+ ++++||++..+.++..+++++.++ |+++..++++++++.++++++++| +.++...+..++++++.+.+
T Consensus 226 ~~~~~~~~~-~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~ 304 (374)
T TIGR01365 226 KLNKKIFEG-STINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKV 304 (374)
T ss_pred chhhhhhcC-CCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEe
Confidence 12223 578999999999999999988886 799999999999999999999998 67666434457888888888
Q ss_pred CCC-C-----C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 314 PSH-I-----N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 314 ~~~-~-----~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
|++ + + ..++.+.|.++ ||.+.+|.....++.|||++.+.++.+|++.+++.|+.+..+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 305 VDPAIDALDEDAQADFAKELISTLEKE-GVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred CCccccccccchhhHHHHHHHHHHHHC-CEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 554 4 2 67888888876 999999988777889999999999999999999999887654
No 24
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=2.5e-36 Score=287.17 Aligned_cols=342 Identities=15% Similarity=0.155 Sum_probs=268.8
Q ss_pred cccccCCCcCChHHHHHHHccCcCC-----CC----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
.||+.++.+++++.|++++.+.... +. +....+.++++++.+++++|.++. .+++++|+|+++..++.++
T Consensus 2 ~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHH
Confidence 6899999999999999999764321 11 122346688999999999998754 4999999999999887665
Q ss_pred C----CCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 81 L----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 81 ~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
+ ++||+|++...+|+++. +...++..|++++.++.+.++.+|++++++.+++ +++++++++++||||.+.|
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----~~~lv~~~~~~n~tG~~~~ 156 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITP----DTVLASIQHANSEIGTIQP 156 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCC----CCEEEEEECCcCCcEeehh
Confidence 4 57899999888888765 3356677899999999888788999999998864 5689999999999999999
Q ss_pred hHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+++|.++|++ +|+++|+|++|++|..+++..++++|++++|+||++ |++|+|+++++++. .+.......
T Consensus 157 ~~~I~~l~~~--~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~--~~~~~~~~~------ 225 (381)
T PRK02948 157 IAEIGALLKK--YNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQV--RWKPVFPGT------ 225 (381)
T ss_pred HHHHHHHHHH--cCCEEEEEChhhccccccCcccCCCCEEEecHHhcC-CCCcEEEEEEcCCC--CCCCcccCC------
Confidence 9999999999 999999999999998888888889999999999976 69999999998774 111110000
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC-CccCCceeEEEEcC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK-EEWFSDTVTAVIVP 314 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~ 314 (401)
...+.+.++|++...++++.++++...+ ++++..++..++++++++.|+++|+++.... .+...+.++.+.+
T Consensus 226 -----~~~~~~~~~t~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~- 298 (381)
T PRK02948 226 -----THEKGFRPGTVNVPGIAAFLTAAENILK-NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTI- 298 (381)
T ss_pred -----CCCCCcCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEe-
Confidence 0012234567999999999999987654 4788899999999999999999887655322 2223344566666
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCC-------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNKV-------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~~-------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.+.+..++...|.++ ||.++.|..+. .++.+||++..++|++|+|+++++|+++++++..
T Consensus 299 ~~~~~~~~~~~l~~~-gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 299 KGIEGQYTMLECNRR-GIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred CCCCHHHHHHhcccC-CEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 455677888887554 99999875421 1357999999999999999999999999887654
No 25
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=2.2e-36 Score=287.00 Aligned_cols=341 Identities=19% Similarity=0.217 Sum_probs=272.7
Q ss_pred cccccCCCcCChHHHHHHHccCcCC-----CC-----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YR-----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~-----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
.||..++-+++++.+++++.++... ++ +....+.+.++++.+++++|.+.++.+++++|+|+|+..++.+
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 4888999999999999999875421 11 1224566889999999999998455699999999999999988
Q ss_pred cCC---CCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 80 TLS---PGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 80 ~~~---~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
+.. +||+|++++++|++.. +...++..|++++.++.+.++.+|++++++.+++ +++++++++++||||.+.
T Consensus 81 l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~~~tG~~~ 156 (373)
T cd06453 81 LGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE----RTKLVAVTHVSNVLGTIN 156 (373)
T ss_pred hhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC----CceEEEEeCcccccCCcC
Confidence 776 8999999999888864 4456667899999999987788999999999974 569999999999999999
Q ss_pred chHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc--
Q 015729 155 NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF-- 232 (401)
Q Consensus 155 ~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~-- 232 (401)
|+++|.++|++ +|++||+|++|+.+..+++....++|++++|+||++++ +|+|+++++++..+.+..........
T Consensus 157 ~~~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~~~~~~~g~~~~~~ 233 (373)
T cd06453 157 PVKEIGEIAHE--AGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLEEMPPYGGGGEMIEE 233 (373)
T ss_pred CHHHHHHHHHH--cCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCC-CCcEEEEEchHHhhcCCCeecCCCcccc
Confidence 99999999999 99999999999998888888778999999999999965 88999999999888776543211100
Q ss_pred ------chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCC
Q 015729 233 ------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFS 305 (401)
Q Consensus 233 ------~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 305 (401)
.+...... +..++++...++++.++++.+.+.|++...++..++++++++.|+++ ++++..... ..
T Consensus 234 ~~~~~~~~~~~~~~-----~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~ 306 (373)
T cd06453 234 VSFEETTYADLPHK-----FEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAE--DR 306 (373)
T ss_pred ccccccccCCCccc-----cCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcc--cc
Confidence 01011111 22346888889999999999998889999999999999999999987 777764321 23
Q ss_pred ceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHHHHHH
Q 015729 306 DTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
..++++.++ +.+..++.+.|.++ ||.+..+..+. .++.+|+++..++|++|+|+++++|
T Consensus 307 ~~~~~~~~~-~~~~~~i~~~l~~~-gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 307 AGVVSFNLE-GIHPHDVATILDQY-GIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCeEEEEEC-CcCHHHHHHHHHHC-CEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 457778874 45778899998765 99998775421 2467999999999999999999864
No 26
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=2.3e-35 Score=276.62 Aligned_cols=337 Identities=18% Similarity=0.180 Sum_probs=255.9
Q ss_pred ccccCCCcCChHHHHHHHccCc------------CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCC-hhHHHHHHH
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTT-GTGAWESAL 77 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g-~t~a~~~~~ 77 (401)
++|.|||++.|+.|++++.++. ..|++..+.+.+.++|+.+++++|.+.++.++|++| +|+|++.++
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~ 80 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVP 80 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHH
Confidence 5799999999999999998865 235556777899999999999999865566888877 999999999
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCC-C-hHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGA-K-LDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-d-~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
.+++.++++...+..+.++..+..+++..|++++.++.+.++.. + ++..+..++ +++++|.++|.+|.||...+
T Consensus 81 ~~l~~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 81 LNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA----PDAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred HhcCCCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC----CCCCEEEEeCCcccccEEcc
Confidence 99887666665555677777777788999999999998654322 3 233323333 46799999999999999843
Q ss_pred hHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
++++. +|+++++|+++++|..++|.++++ +.++|+||++ ||+|+|++++++++++++.+... .+.++.
T Consensus 157 -----~i~~~--~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~l-GP~G~g~l~~~~~~~~~~~~~~~--~~~~~~ 224 (355)
T cd00611 157 -----EVPDT--GGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNL-GPAGVTVVIVRKDLLGKARKITP--SMLNYK 224 (355)
T ss_pred -----eeccc--CCCeEEEEccccccCCCCCHHHhC--EEEeeccccc-CCCceEEEEECHHHHhhcccCCC--CcccHH
Confidence 45666 999999999999999999998766 4557799977 69999999999999988765422 122222
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 313 (401)
.... .+ .+.+||++..++++.++++++.++ |++++.++.+++++++++.|+++ |+.....++..+++.++.|.+
T Consensus 225 ~~~~---~~-~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~ 300 (355)
T cd00611 225 THAD---NN-SLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRL 300 (355)
T ss_pred HHHh---cC-CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEc
Confidence 2112 22 236789999999999999999998 79999999999999999999998 853122222235556688887
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++.....++...+.+ .|+....+.. ..+.+|+|++.++|++|||+++++|+++.
T Consensus 301 ~~~~l~~~~~~~~~r-~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 301 GKEELEKEFLKEAEA-AGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred CChhhhHHHHHHHHH-CCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 431111344344443 4886555543 23689999999999999999999998853
No 27
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=1.5e-35 Score=283.24 Aligned_cols=340 Identities=14% Similarity=0.115 Sum_probs=262.9
Q ss_pred CcccccCCCcCChHHHHHHHccCcC-----CCC-Cc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNE-----DYR-SP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~-----~~~-~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..||+.++++++++.|++++..+.. .+. .. ...+.++++++.+++++|.++. .+++++|+|++++.++.
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~ 82 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFTSGATESNNLAIK 82 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHH
Confidence 5899999999999999999876431 111 11 1235688899999999998764 49999999999998875
Q ss_pred cc----CCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 79 NT----LSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 79 ~~----~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
++ .++||+|+++.++|++.. ....++..|++++.++.+.++.+|++++++.+++ +++++++++++|+||.+
T Consensus 83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----~~~lv~v~~~~n~tG~~ 158 (402)
T TIGR02006 83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRD----DTILVSIMHVNNEIGVI 158 (402)
T ss_pred HHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC----CCEEEEEECCCcCceec
Confidence 54 368999999999888765 2234456799999999988888999999999874 56899999999999999
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
.|+++|.++|++ +|+++++|++|+.|..+++..+.++|++++|+||++ ||.|+|+++++++...++.+......
T Consensus 159 ~~~~~I~~l~~~--~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~~~~~g~~--- 232 (402)
T TIGR02006 159 QDIAAIGEICRE--RKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIY-GPKGIGALYVRRKPRVRLEALIHGGG--- 232 (402)
T ss_pred ccHHHHHHHHHH--cCCEEEEEcchhcCCcccCccccCCCEEEEehhhhc-CCCceEEEEEccCCCCCCCceecCCC---
Confidence 999999999999 999999999999999998888889999999999965 68899999999876544433211100
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEE
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 312 (401)
+.+.++ .+|++...++++.++++.+.. +++...++..++.+++++.|.++ ++.+..... .+.+..+.+.
T Consensus 233 ---~~~~~~-----~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~-~~~p~~~~v~ 302 (402)
T TIGR02006 233 ---HERGMR-----SGTLPTHQIVGMGEAFRIAKE-EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLE-HRVPGNLNVS 302 (402)
T ss_pred ---ccCCcc-----CCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcc-ccCCCeEEEE
Confidence 011233 346999999999999998775 57888899999999999999886 666654322 1333333344
Q ss_pred cCCCCCHHHHHHHHHhhCCeEEccCCCCCC-------------------CcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 313 VPSHINSSEIVRRAWQRYNLSLGLGLNKVA-------------------GKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 313 ~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~-------------------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++ ..+..++...| + +|.++.|..+.. .+.+|+|+..++|++|+|++++.|+++++.+
T Consensus 303 f~-~~~~~~~~~~l--~-~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 303 FN-YVEGESLIMAL--K-DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred Ee-CcCHHHHHHhc--C-CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 43 34556666555 2 777766644321 3679999999999999999999999988764
No 28
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=5.4e-35 Score=277.95 Aligned_cols=341 Identities=12% Similarity=0.078 Sum_probs=261.2
Q ss_pred cccccCCCcCChHHHHHHHccCcCC-----CCCc-c---HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YRSP-A---VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~-~---~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
.|++.++.+++++.|++++.++... +... . .....++.++.+.+.+|..+++++++++|+|+++..++.++
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~ 80 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV 80 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence 4899999999999999999874432 1111 1 12234455555566666644456999999999999888764
Q ss_pred C-----CC-CCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 81 L-----SP-GDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 81 ~-----~~-gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
. ++ +++|+++..+|+++. ....++..|++++.++.+.++.+|++++++++++ +++++++++++||||.+
T Consensus 81 ~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~----~t~lv~~~~~~n~tG~~ 156 (382)
T TIGR03403 81 YFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE----KTALVSVMWANNETGMI 156 (382)
T ss_pred HHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc----CCeEEEEEcccCCCccc
Confidence 2 45 468999988888776 3345567899999999988888899999999874 56899999999999999
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
.|+++|.++|++ +|+++++|++++.|..+++..++++|++++|+||++ ||+|+|+++++++. .+.+.......
T Consensus 157 ~~~~~I~~la~~--~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~G~g~l~vr~~~--~~~p~~~g~~~-- 229 (382)
T TIGR03403 157 FPIKEIGEICKE--RGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFH-GPKGVGGLYIRKGV--ELTPLFHGGEH-- 229 (382)
T ss_pred cCHHHHHHHHHH--cCCEEEEechhhcCCCccCccccCCCEEEEcchhhC-CCCceEEEEECCCC--CCCCcccCCCC--
Confidence 999999999999 999999999999998888888889999999999975 79999999998764 12221100000
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEE
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 312 (401)
...+ ..+|++...++++.++++...+ .++...++.+++++++.+.|.++ |+++..+.. .+.+.++.+.
T Consensus 230 ----~~~~-----~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~ 298 (382)
T TIGR03403 230 ----MGGR-----RSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDRE-HRVPNTILIS 298 (382)
T ss_pred ----CCCc-----ccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCC-CCcCCEEEEE
Confidence 0111 2456899889999999987665 47788899999999999999886 777765432 2344566677
Q ss_pred cCCCCCHHHHHHHHHhhCCeEEccCCCCC-------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 313 VPSHINSSEIVRRAWQRYNLSLGLGLNKV-------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 313 ~~~~~~~~~l~~~L~~~~~i~v~~g~~~~-------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+ ++++..++.+.|.++ ||.++.|..+. .++.+|+|++.++|++|+|+++++|+++++++
T Consensus 299 ~-~~~~~~~~~~~L~~~-gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 299 I-KGVEGEAMLWDLNKA-GIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred e-CCCCHHHHHHhhccC-CEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7 566788888888655 99999764321 13569999999999999999999999998765
Q ss_pred C
Q 015729 374 G 374 (401)
Q Consensus 374 ~ 374 (401)
+
T Consensus 377 ~ 377 (382)
T TIGR03403 377 R 377 (382)
T ss_pred H
Confidence 3
No 29
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=1.9e-34 Score=268.29 Aligned_cols=328 Identities=16% Similarity=0.172 Sum_probs=255.8
Q ss_pred CChHHHHHHHccCcC------------CCCCccHHHHHHHHHHHHHHHhcCCCCceEEec-CChhHHHHHHHhccCCCCC
Q 015729 19 HIPDQVIRAMNRNNE------------DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIP-TTGTGAWESALTNTLSPGD 85 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~a~~~~~~~~~~~gd 85 (401)
..|.+|++++.++.. .|+++.+.+.++++++.++++++.+..+.++++ +|||.|+++++.+++.+||
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 356677777766332 245667789999999999999998544457666 4599999999999999999
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeCC----CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHH
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESD----WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRK 161 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~ 161 (401)
+++++..|.|+..|...+++.|+ +..+..+ +...+|+++++. + +++++|.++|.+|.||+..+ +
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~v~~th~ETstGv~~~-----~ 149 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S----EDAAYVHYCANETIHGVEFR-----E 149 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C----CCCCEEEEcCCCCcccEecc-----e
Confidence 99999999999999999999999 7777754 223456665442 2 36799999999999999886 6
Q ss_pred HhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
+++. +++++++|+++++|..+++.+++ |++++|+||++ ||+|+|++++++++++++.+... .+.++... .
T Consensus 150 l~~~--~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~~~~~--~~~~~~~~---~ 219 (349)
T TIGR01364 150 LPDV--KNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNI-GPAGLTVVIVRKDLLGRASRITP--SMLNYKIH---A 219 (349)
T ss_pred eccc--CCCeEEEEccccccCccCCHHHc--cEEEEeccccc-CCCceEEEEECHHHHhhcccCCC--CcchHHHH---H
Confidence 7777 89999999999999999999864 59999999988 59999999999999988766322 22332111 1
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCH
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINS 319 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (401)
..+ ++++||++..++++.++++++.++ |++++.++.+++++++++.|+++ |+.....++..+++.++.|.+|+....
T Consensus 220 ~~~-~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~ 298 (349)
T TIGR01364 220 END-SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELE 298 (349)
T ss_pred hcC-CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHh
Confidence 112 346789999999999999999998 79999999999999999999999 665443322335667788888642112
Q ss_pred HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 320 SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 320 ~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.++...+.++ |+.+.++.. ..+.+|+|++.++|++|||+++++|+++++.
T Consensus 299 ~~~~~~~~~~-Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 299 KRFLKEAEER-GLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred HHHHHHHHHC-CCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 4555556544 886666644 2358999999999999999999999987753
No 30
>PLN02452 phosphoserine transaminase
Probab=100.00 E-value=2.4e-34 Score=267.27 Aligned_cols=338 Identities=15% Similarity=0.178 Sum_probs=270.9
Q ss_pred CcccccCCCcCChHHHHHHHccCc------------CCCCCccHHHHHHHHHHHHHHHhcCCCCceE-EecCChhHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPF-LIPTTGTGAWES 75 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i-~~~~g~t~a~~~ 75 (401)
+.|||+|||..+|+.|++++.+.. ..|+++.+.+.+.++++.++++++.+..+++ ++.+|||.++++
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea 86 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAA 86 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHH
Confidence 579999999999999999998752 5688999999999999999999998654445 557999999999
Q ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC---CCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE---GAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
++.+++.+|+++++...|.|+..+.+.++..|...+........ .++++++ +.+ ..++.+.++|.++.||+
T Consensus 87 ~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~v~~~hnETstGv 160 (365)
T PLN02452 87 IPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELT--PDAKFVHICANETIHGV 160 (365)
T ss_pred HHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCC--CCCcEEEECCCCCCCcE
Confidence 99999999999999999999999989999999755544322222 4566654 222 35789999999999999
Q ss_pred c-cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 153 T-NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 153 ~-~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
. .|++++. ++++++|+++++++.++|++++++|+ +|+||.+ ||+|+|+++++++++++..... ..+
T Consensus 161 ~~~~~~~i~--------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~l-GP~Gl~~v~vr~~~l~~~~~~~--~~~ 227 (365)
T PLN02452 161 EFKDYPDVG--------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNV-GPSGVTIVIIRKDLIGNARPIT--PGM 227 (365)
T ss_pred ecCcccccC--------CCeEEEECCccccCcccCHHHcCEEE--Eeccccc-CCCCeEEEEEcHHHHhhcccCC--Cch
Confidence 6 6766553 27899999999999999999888765 6999988 6999999999999998865432 224
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeE
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 309 (401)
+++....+ .+ ++.+||++..++++.++++++.++ |++.+.++.+++++++++.|++. |+.....++..++...+
T Consensus 228 ~~~~~~~~---~~-s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~v 303 (365)
T PLN02452 228 LDYKIHAE---ND-SLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNV 303 (365)
T ss_pred hhHHHHHh---cC-CccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEE
Confidence 44433222 22 557899999999999999999987 79999999999999999999985 77222222233677788
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.|.+++....+++.+.+.++ |+...+|.... ++ +|+|+++.++.++++.+++.+++.-++
T Consensus 304 sF~~~~~~~~~~f~~~~~~~-g~~~~~G~r~~-gg-~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 304 PFTLGGSELEAEFVKEAAKA-GMVQLKGHRSV-GG-MRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEEcCCchhHHHHHHHHHHC-CCcccCCcccc-Cc-eEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 88886544566888888766 99988886653 33 999999999999999999999987654
No 31
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=3.5e-34 Score=274.07 Aligned_cols=345 Identities=16% Similarity=0.127 Sum_probs=256.7
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCC--------CCC--ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNED--------YRS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~--------~~~--~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
++..||.+++-+++++.|.+++.++... +.. ..+.....++++ + +++|.+++ .+++++|+|++++.+
T Consensus 26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-~v~~~~~~t~~l~~~ 102 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-EVVVMNTLTINLHLL 102 (406)
T ss_pred CCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-cEEEeCCchHHHHHH
Confidence 5569999776667788898888763211 111 122333444444 5 89998754 499999999999998
Q ss_pred HhccCCCCC---eEEEEcCCcchHH--HHHHHHHcCCcE----EEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecC
Q 015729 77 LTNTLSPGD---RIISFLIGQFSLL--WIDQQQRLNFNV----DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNE 147 (401)
Q Consensus 77 ~~~~~~~gd---~vl~~~~~~~~~~--~~~~~~~~g~~~----~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~ 147 (401)
+.+++++++ .|++...+|++.. +...++..|+++ +.++.+.++.+|++++++.++..+ ++++++++++++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~~t~lv~~~~v~ 181 (406)
T TIGR01814 103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNG-DDIAVILLSGVQ 181 (406)
T ss_pred HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcC-CCeEEEEEeccc
Confidence 888776643 5777667887754 444567778887 456666566789999999886433 578999999999
Q ss_pred CCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 148 TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 148 n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
|.+|.+.|+++|.++|++ +|+++++|++|++|..+++..++++|++++|+|||+++++| |.++++++....+.+...
T Consensus 182 ~~tG~~~~~~~i~~~~~~--~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~~ 258 (406)
T TIGR01814 182 YYTGQLFDMAAITRAAHA--KGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTERPRLA 258 (406)
T ss_pred cccceecCHHHHHHHHHH--cCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhcCCCCC
Confidence 999999999999999999 99999999999999999999899999999999999987888 777776665544443222
Q ss_pred Cccc------cc----hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-C---
Q 015729 228 VRVF------FD----WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G--- 293 (401)
Q Consensus 228 ~~~~------~~----~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g--- 293 (401)
.... ++ +.....+++ .+|+++..++++.++++.+.+.|++++.++..++.+++++.|.++ |
T Consensus 259 g~~~~~~~~~~~~~~~~~~~~~~~~-----~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~ 333 (406)
T TIGR01814 259 GWWGHARPTRFKMDNTLGLIPCGFR-----ISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPP 333 (406)
T ss_pred cccCCCCccccccccccCCCcccee-----eCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 1100 00 000012222 346999999999999999998899999999999999999999875 3
Q ss_pred -CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEee-cccCCHHHHHHHHHHHHHHH
Q 015729 294 -LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH-LGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~-~~~~~~~di~~~~~~i~~~l 370 (401)
+++..+.+......++.|.+| .+..++.+.|.++ ||.+... .++.+|||+ +.++|++|+|+++++|++++
T Consensus 334 ~~~i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~-gi~v~~~----~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 334 VLTIITPRDHAQRGCQLSLTHP--VPGKAVFQALIKR-GVIGDKR----EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ceEEeCCCChhhcCCeEEEEec--CCHHHHHHHHHHC-CEEEecc----CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 666654322222346778875 4678899999766 9987522 246899998 57899999999999998865
No 32
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=8.8e-33 Score=253.60 Aligned_cols=339 Identities=16% Similarity=0.140 Sum_probs=271.9
Q ss_pred CCcccccCCCcCChHHHHHHHcc-----Cc-------CCCCCccHHHHHHHHHHHHHHHhcCCCCceE-EecCChhHHHH
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNR-----NN-------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPF-LIPTTGTGAWE 74 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~-----~~-------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i-~~~~g~t~a~~ 74 (401)
.+.|+|+|||..+|++|++++++ .. .+|+++.+.+++.++++.++++++.+..+.+ ++.+|||.+++
T Consensus 3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e 82 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS 82 (364)
T ss_pred cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence 35799999999999999999984 22 4588999999999999999999999654445 44677999999
Q ss_pred HHHhccCCCCCeEE-EEcCCcchHHHHHHHHHcCCcEEEEeCCC----CCCCChHHHHHHHhccCCCCceEEEEEecCCC
Q 015729 75 SALTNTLSPGDRII-SFLIGQFSLLWIDQQQRLNFNVDVVESDW----GEGAKLDVLASKLAADTAHTIKAICIVHNETA 149 (401)
Q Consensus 75 ~~~~~~~~~gd~vl-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~ 149 (401)
++..+++.+||+++ ....|+|+..|...++..| ++..+.... +..+++++++ ++ +..+.+.+++.++.
T Consensus 83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~----~d~~~v~~t~NETs 155 (364)
T PRK12462 83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WD----ARAPFRHYVSNETV 155 (364)
T ss_pred HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cC----CCCcEEEEccCCCC
Confidence 99999999999777 7889999999888888887 565554322 2344555541 22 23578999999999
Q ss_pred cccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 150 TGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 150 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+|+..+ ++.+. +++++|+|.++++++.+++++++ |+++.+.+|.++ |+|+++++++++++++..... .
T Consensus 156 tGv~~~-----~~~~~--~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlg-P~Gltvvivs~~al~~~~~~~--p 223 (364)
T PRK12462 156 EGLQFP-----DAAGL--PDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLG-PAGVTVAIIRRALLERVPDTL--P 223 (364)
T ss_pred ceEecC-----ccccc--CCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCC-CCceEEEEECHHHHhhccccC--C
Confidence 999997 44445 68999999999999999999976 999999999995 999999999999998876432 2
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCc
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE--GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSD 306 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~--g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 306 (401)
.++++..... .+ ...+||++..++++..+++++.++ |++...++.++.++.+++.+++. |+.....++..+|.
T Consensus 224 ~~ldy~~~~~---~~-s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~ 299 (364)
T PRK12462 224 PMLDFRTHVE---HR-SNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARST 299 (364)
T ss_pred chhhHHHHHh---cC-CCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCc
Confidence 3555544444 23 346799999999999999999887 89999999999999999999998 56666666677888
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.+.|.+++..-..++.+.+.++ |+.-..|+-. -+.+|+|.+...+.++++.+++-+++.-++
T Consensus 300 mnv~f~~~~~~l~~~f~~~a~~~-gl~~lkGhr~--vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 300 MNVAFRFRQPRLDTLFKEQSTEA-GFCGLSGHRS--IGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred ceEEEEcCCHHHHHHHHHHHHHC-CCccccCCcc--cCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 88888886543455677777655 8876666543 234999999999999999999999887654
No 33
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=2.7e-33 Score=286.52 Aligned_cols=362 Identities=12% Similarity=0.048 Sum_probs=269.3
Q ss_pred CCCCCCCcccccCCCcCChH-HHHHHHccCc-----CCCC----CccHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhH
Q 015729 3 YMYAPGKNHLFVPGPVHIPD-QVIRAMNRNN-----EDYR----SPAVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTG 71 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~-~v~~a~~~~~-----~~~~----~~~~~~~~~~l~~~la~~~g~~~~~-~i~~~~g~t~ 71 (401)
|+...+..||+.++.+++++ .|.+++..+. +.+. +....+.+.++|+.+++++|.++++ .++||+|+|+
T Consensus 29 fp~l~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 29 FARLKGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred hhhcCCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 33344578999999888665 4445444321 1221 1224567899999999999997654 5899999999
Q ss_pred HHHHHHhcc-CCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCC--------CCCCCCh--HHHHHHHh------cc
Q 015729 72 AWESALTNT-LSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESD--------WGEGAKL--DVLASKLA------AD 133 (401)
Q Consensus 72 a~~~~~~~~-~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~--------~~~~~d~--~~le~~~~------~~ 133 (401)
|++.+..++ +++||+|+++..+|.+.. |..+++..|++++.++.+ ..+.+++ +++++.++ ..
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~ 188 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRED 188 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccc
Confidence 999988776 789999999888887766 556677889999999876 2233333 55666532 11
Q ss_pred CCCCceEEEEEecCCCcccccchHHHHHHhhh-cCC-----CcEEEEecccccCcceeccCcccceEEEecCCCcccCCC
Q 015729 134 TAHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRH-----PALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPT 207 (401)
Q Consensus 134 ~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~-~~~-----~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~ 207 (401)
...+++++.+++.+|.+|.+.|++.|..+++. +.+ ++++++|++|+.|..++|+.++++|++++|+||++++|.
T Consensus 189 ~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~ 268 (805)
T PLN02724 189 DGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPT 268 (805)
T ss_pred cCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCC
Confidence 11356899999999999999999977655553 112 368999999999999999999999999999999997799
Q ss_pred cceEEEecHHHHHHhccCCCCcc----------c-cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 208 GMGIVCASPKALEASKTAKSVRV----------F-FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 208 g~G~l~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
|+|+++++++..+.+.+....+. + ........+++.|+ ++...++++.++++++.+.|++++.+
T Consensus 269 G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT-----~n~~~i~~l~aal~~l~~ig~~~I~~ 343 (805)
T PLN02724 269 GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGT-----ISFLSIAALRHGFKLLNRLTISAIAM 343 (805)
T ss_pred CceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCC-----cchhHHHHHHHHHHHHHHhChHHHHH
Confidence 99999999998877765432210 0 01112356788775 99999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHc-------CCccccCCC----ccCCceeEEEEcCCCCC-----HHHHHHHHHhhCCeEEccCCCC
Q 015729 277 RHRRLGKATRLAVEAW-------GLKNCTQKE----EWFSDTVTAVIVPSHIN-----SSEIVRRAWQRYNLSLGLGLNK 340 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-------g~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~l~~~L~~~~~i~v~~g~~~ 340 (401)
+..++.+++.+.|.++ ++.++.+.. ......++.|.+ .+.+ ..++. .|.+.+||.++.|..+
T Consensus 344 ~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv-~~~~~~~v~~~~v~-~l~~~~gI~vR~G~~C 421 (805)
T PLN02724 344 HTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNL-KRADGSWVGHREVE-KLASLSGIQLRTGCFC 421 (805)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEE-EcCCCCEeCHHHHH-HHHHhcCcEEeecccc
Confidence 9999999999999986 256665321 112345777887 3333 33444 4555679999988653
Q ss_pred C-----------------------------------CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 341 V-----------------------------------AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 341 ~-----------------------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
- ..+.+|+|+..++|++|||++++.|++..-
T Consensus 422 a~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~ 487 (805)
T PLN02724 422 NPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV 487 (805)
T ss_pred CchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence 2 126699999999999999999999999763
No 34
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=9.1e-33 Score=262.40 Aligned_cols=343 Identities=14% Similarity=0.108 Sum_probs=255.1
Q ss_pred CcccccC--CCcCChHHHHHHHccCcCCCCC---------ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 9 KNHLFVP--GPVHIPDQVIRAMNRNNEDYRS---------PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 9 ~~~~~~~--~p~~~~~~v~~a~~~~~~~~~~---------~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
...++-| --+++++++++++.++...... ........++++.+++++|.+. +++++|+++|+..++
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~---~~~~~g~t~a~~~al 95 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE---ARVTHGAREGKFAVM 95 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHH
Confidence 3444444 2477888899988886532211 1123468899999999999865 778999999999999
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC--CCCCCCChHHHHHHHhcc---CCCCceEEEEEecCCCccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAAD---TAHTIKAICIVHNETATGV 152 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~le~~~~~~---~~~~~~~i~~~~~~n~tG~ 152 (401)
.+++++||+|++..++|++... .++..|++++.++. +.++.+|++++++.+++. ..++++++++++++|++|.
T Consensus 96 ~~l~~~gd~Vlv~~~~h~s~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~ 173 (387)
T PRK09331 96 HSLCKKGDYVVLDGLAHYTSYV--AAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGN 173 (387)
T ss_pred HHhcCCCCEEEECCCchHHHHH--HHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcc
Confidence 9999999999999999888763 36778999999998 567778999999998752 1136799999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+.|+++|.++|++ +|+++|+|++|+.|..+++...+++|++++|+||+++++.|+|+++++++.++.+...... +..
T Consensus 174 ~~~l~~I~~la~~--~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~-~~~ 250 (387)
T PRK09331 174 LADAKKVAKVAHE--YGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRK-FGV 250 (387)
T ss_pred cccHHHHHHHHHH--cCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCC-Ccc
Confidence 9999999999999 9999999999999988888888899999999999998888899999999988776443210 000
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 311 (401)
... .++..+.+...++++.++++.+.+. .+..++..++++++++.|.++ |++++...+ .+..++.+
T Consensus 251 ------~~~---~~~~~~~~~~~~~~~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~--~~~~i~~~ 317 (387)
T PRK09331 251 ------KEV---ELLGCTLRGAPLVTLMASFPHVVER--VKRWDEEVKKARWFVDELEKIEGFKQLGEKP--RNHDLMKF 317 (387)
T ss_pred ------cce---eeeceecCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCEEEeccCc--CcCCeEEE
Confidence 000 0011123333345556666655443 235566678888999999998 998875321 23346666
Q ss_pred EcCC--------CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCC
Q 015729 312 IVPS--------HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPV 377 (401)
Q Consensus 312 ~~~~--------~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~ 377 (401)
..|. ..+..++.+.|.++ ||...+ ...++.+|++..+ ++++|+++++++|++++++++.++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~---~~~~~i~ri~~~g-~t~~di~~l~~aL~~i~~~~~~~~ 386 (387)
T PRK09331 318 ETPSFDEIAKKHKRRGFFLYEELKKR-GIHGIK---PGATKEFKLSTYG-LTWEQVEYVADAFKEIAEKYGLEV 386 (387)
T ss_pred eCCchhHHhhhccccchhHHHHHHHc-CceEEc---cCCceEEEEEecc-CCHHHHHHHHHHHHHHHHhcCCCC
Confidence 6541 11235688889765 997322 2235668887766 799999999999999999887654
No 35
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=5.6e-33 Score=265.74 Aligned_cols=339 Identities=14% Similarity=0.116 Sum_probs=253.9
Q ss_pred CcccccCCCcCChHHHHHHHccCcC---C----CC-Cc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNE---D----YR-SP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~---~----~~-~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
+.|++.++++++++.+++++.++.. . +. .. .....+.++++.+++++|.++. .+++++|+|+|++.+
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-~v~~~~g~t~al~~~ 82 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-EIVFTSGATESDNLA 82 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-eEEEeCCHHHHHHHH
Confidence 6899999999999999999977542 1 11 11 1135678899999999998764 499999999999988
Q ss_pred Hhcc----CCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcc
Q 015729 77 LTNT----LSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (401)
Q Consensus 77 ~~~~----~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG 151 (401)
+.++ +++||+|+++..+|++.. .....+..|++++.++.+.++.+|++++++++++ +++++++++++|+||
T Consensus 83 l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~----~t~lv~~~~~~n~tG 158 (404)
T PRK14012 83 IKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRD----DTILVSIMHVNNEIG 158 (404)
T ss_pred HHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCC----CCEEEEEECcCCCcc
Confidence 7654 478999999999887765 1233345699999999988888999999999974 568999999999999
Q ss_pred cccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
.+.|+++|.++|++ +|+++|+|++|+.|..+++....++|++++|+||.+ |+.|+|+++++++...++.+......
T Consensus 159 ~~~~~~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~~~~~~~~g~~- 234 (404)
T PRK14012 159 VIQDIAAIGEICRE--RGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIY-GPKGIGALYVRRKPRVRLEAQMHGGG- 234 (404)
T ss_pred chhhHHHHHHHHHH--cCCEEEEEcchhcCCcccCcccCCCCEEEEehhhcc-CCCceEEEEEecCCCCCCCceecCCC-
Confidence 99999999999999 999999999999998888888888999999999965 67789999998875333322111000
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCce--e
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDT--V 308 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~--~ 308 (401)
....++ .++++...++++.++++..+. +.+...++.+++.+++.+.|+++ ++.+...... ..+. .
T Consensus 235 -----~~~~~~-----~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~-~~~~~~~ 302 (404)
T PRK14012 235 -----HERGMR-----SGTLPTHQIVGMGEAARIAKE-EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQ-RVPGNLN 302 (404)
T ss_pred -----ccCCcc-----CCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc-cCCCEEE
Confidence 001122 235777788888889887655 45678888999999999999886 5655432111 2222 3
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-------------------CCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-------------------VAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-------------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+++..+ +..++...|. ++.+..+..+ ...+.+|++++.++|++|+|+++++|+++
T Consensus 303 ~~~~~~---~~~~~~~~l~---~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~ 376 (404)
T PRK14012 303 VSFNYV---EGESLIMALK---DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKS 376 (404)
T ss_pred EEEeCc---CHHHHHHhCC---CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence 444442 3456666663 5555544221 11357999999999999999999999999
Q ss_pred HHhcC
Q 015729 370 LKDVG 374 (401)
Q Consensus 370 l~~~~ 374 (401)
++.+.
T Consensus 377 ~~~~~ 381 (404)
T PRK14012 377 IGKLR 381 (404)
T ss_pred HHHHH
Confidence 87653
No 36
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-33 Score=260.42 Aligned_cols=333 Identities=19% Similarity=0.169 Sum_probs=244.9
Q ss_pred CcccccCC-C-cCChHHHHHHHccCcCCCC-CccHHHHHHHHHHHHHHHhcCC------CCceEEecCChhHHHHHHHhc
Q 015729 9 KNHLFVPG-P-VHIPDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTT------SGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 9 ~~~~~~~~-p-~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~la~~~g~~------~~~~i~~~~g~t~a~~~~~~~ 79 (401)
..+.++-| | .+.|+.+++++.+...... .+.......+||+.+++++... +++++++|+|+++|+..++.+
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLA 108 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 45666665 3 3666667777766332211 2224556667777777665432 335599999999999999999
Q ss_pred cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC---CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-
Q 015729 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD---WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~- 155 (401)
++.|||+|++++|+|+++. ......|++++.++++ .++.+|++++++++++ ++|++++++|+||||.+++
T Consensus 109 ~~~pGDeVlip~P~Y~~y~--~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~----ktk~i~ln~P~NPTGav~~~ 182 (393)
T COG0436 109 LLNPGDEVLIPDPGYPSYE--AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP----KTKAIILNSPNNPTGAVYSK 182 (393)
T ss_pred hcCCCCEEEEeCCCCcCHH--HHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc----cceEEEEeCCCCCcCcCCCH
Confidence 9999999999999888765 5678899999999975 3678999999999984 6799999999999999996
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCcce----e---ccCc-ccceEEEecCCCcccCCCc--ceEEEec-HHHHHHh
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICAID----F---RMDE-WGIDVALTGSQKALSLPTG--MGIVCAS-PKALEAS 222 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~~~----~---~~~~-~~~di~~~s~~K~l~g~~g--~G~l~~~-~~~~~~~ 222 (401)
+++|+++|++ +|++||.|++|...... . .... ....+.+.|.+|.++ .+| +||++++ +++.+.+
T Consensus 183 ~~l~~i~~~a~~--~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~-mtGwRvG~~v~~~~~l~~~~ 259 (393)
T COG0436 183 EELKAIVELARE--HDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYG-MTGWRIGWVVGPPEELIAAL 259 (393)
T ss_pred HHHHHHHHHHHH--cCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccc-ccccceeEeecChHHHHHHH
Confidence 6778999999 99999999998643221 1 1111 134688889999984 554 7999999 6665555
Q ss_pred ccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHc-CCccccCC
Q 015729 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-GLKNCTQK 300 (401)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 300 (401)
...+. +....++.....++.+||+.-.. ..++..++.+.++++.+.+.|.++ |+++..+.
T Consensus 260 ~~~~~------------------~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p 321 (393)
T COG0436 260 RKLKS------------------YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPP 321 (393)
T ss_pred HHHHH------------------hcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCC
Confidence 42110 11223555555566666654322 235666688999999999999987 68887622
Q ss_pred CccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 301 EEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
....+++..++...+..+++..|++++||.|.||.... ..+++||++.. +.++++++++++.+.++..
T Consensus 322 ---~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~--~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 322 ---EGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT--SEETLEEALRRLARFLAEY 392 (393)
T ss_pred ---CeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec--CHHHHHHHHHHHHHHHHhc
Confidence 23467778886656889999999999899999995533 34789998876 6699999999999988753
No 37
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=1.3e-32 Score=258.83 Aligned_cols=308 Identities=17% Similarity=0.189 Sum_probs=239.9
Q ss_pred ccccCCCcCChHHHHHHHccCcCC-----CC-Ccc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNED-----YR-SPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~-----~~-~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
||+.++.+++++.|++++.++... +. ... ..+.++++++.+++++|.++. .+++++|+|++++.++.++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l 79 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFTSGATESNNLAILGL 79 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHH
Confidence 688888889999999999764311 11 111 235578999999999999764 4999999999999888776
Q ss_pred C----CCC-CeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 81 L----SPG-DRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 81 ~----~~g-d~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
. .+| +.|++...+|++.. .....+..|++++.++.+.++.+|++++++++++ +++++++++++|+||.+.
T Consensus 80 ~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~----~~~lv~~~~~~n~tG~~~ 155 (353)
T TIGR03235 80 ARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRP----DTLLVSIMHVNNETGSIQ 155 (353)
T ss_pred HHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCC----CCEEEEEEcccCCceecc
Confidence 4 355 67888777777765 2234466799999999988888999999999864 569999999999999999
Q ss_pred chHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccch
Q 015729 155 NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 155 ~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
|+++|.++|++ +|+++|+|++|++|..+++..++++|++++|+||++ +|+|+|+++++++....... ...+...
T Consensus 156 ~~~~I~~l~~~--~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~~~~---~~~~~~~ 229 (353)
T TIGR03235 156 PIREIAEVLEA--HEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIY-GPKGIGALVIRKRGKPKAPL---KPIMFGG 229 (353)
T ss_pred CHHHHHHHHHH--cCCEEEEEchhhcCCccccccccCCCEEEeehhhcC-CCCceEEEEEccCccccccc---CceeeCC
Confidence 99999999999 999999999999999999988889999999999985 78999999999885432110 0011100
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
...+.+ ..+|++...++++.++++.+. .+++++.++++++.+++++.|++.|+++..+.. ...+.++.|.+
T Consensus 230 -~~~~~~-----~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~-~~~~~i~~~~~- 300 (353)
T TIGR03235 230 -GQERGL-----RPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPA-ETIPHILNFSI- 300 (353)
T ss_pred -CCcCcc-----ccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcc-cccCCEEEEEe-
Confidence 001122 344688889999999999876 478889999999999999999888988875432 24456777777
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCC
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNK 340 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~ 340 (401)
++.+.+++.+.|. + +|.+++|..+
T Consensus 301 ~~~~~~~v~~~L~-~-~i~v~~g~~~ 324 (353)
T TIGR03235 301 DGVNSEALIVNLR-A-DAAVSTGSAC 324 (353)
T ss_pred CCcCHHHHHHHHh-C-CeEEEchhhc
Confidence 4667889999995 4 8999888665
No 38
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=100.00 E-value=4.7e-31 Score=248.92 Aligned_cols=329 Identities=13% Similarity=0.117 Sum_probs=243.8
Q ss_pred CCcCChHHHHHHHccCcCCCCC---------ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRS---------PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~---------~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
.|.++.+++++++.++...... ........++++.+++++|.+ .+++++|+++++..++.+++++||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~---~i~~~~g~t~al~~~l~~~~~~gd~ 85 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMD---EARVTPGAREGKFAVMHSLCEKGDW 85 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCc---eEEEeCCHHHHHHHHHHHhcCCCCE
Confidence 4678899999999997743211 112245889999999999983 3899999999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC--CCChHHHHHHHhccC---CCCceEEEEEecCCCcccccchHHHHH
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE--GAKLDVLASKLAADT---AHTIKAICIVHNETATGVTNNLSKVRK 161 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~d~~~le~~~~~~~---~~~~~~i~~~~~~n~tG~~~~l~~i~~ 161 (401)
|+++.++|++.. ..++..|++++.++.+.++ .+|++++++++++.. ..+++++++++++||+|.+.|+++|.+
T Consensus 86 Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~ 163 (361)
T cd06452 86 VVVDGLAHYTSY--VAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAK 163 (361)
T ss_pred EEEcCCcchHHH--HHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHH
Confidence 999999888875 3477889999999988654 789999999886421 125789999999999999999999999
Q ss_pred HhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
+|++ +|+++|+|++|+.|..+++..++++|++++|+||+++++.++|+++++++.++++...... ++..
T Consensus 164 ~~~~--~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~---~~~~------ 232 (361)
T cd06452 164 VCHE--YGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQM---FKIK------ 232 (361)
T ss_pred HHHH--cCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccc---cccc------
Confidence 9999 9999999999998887777777789999999999998777899999999998877543321 1100
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC-----
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS----- 315 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~----- 315 (401)
.-.++..++....++++.++++.+.+. + +...+..++++++++.|+++ |++++...+ ....++.+..+.
T Consensus 233 -~~~~~~~~~~~~~~~~~~~al~~~~~~-~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~--~~~n~~~~~~~~~~~~~ 307 (361)
T cd06452 233 -EVELLGCTLRGAPLVTLMASFPHVKER-V-KRWDEEVEKARWFVAELEKIEGIKQLGEKP--KNHDLMFFETPSFDEIA 307 (361)
T ss_pred -eeeeeccccCchHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHhcCCCeEEECCCC--CCCceEEEEcCCcchhh
Confidence 001112234444445566666654332 2 23444455668899999998 888864322 133355566541
Q ss_pred ---CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 316 ---HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 316 ---~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.....++.+.|+++ ||.+. ....++++|++..+ .+++|++.++++|++++
T Consensus 308 ~~~~~~~~~~~~~L~~~-gI~~~---~~~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 308 KKHKRRGYFLYSELKKR-GIHGI---KPGLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hhccccchhHHHHHHHc-CceEE---cCCCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 11223688999876 98842 22235689998755 69999999999998764
No 39
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-31 Score=239.05 Aligned_cols=345 Identities=14% Similarity=0.104 Sum_probs=244.5
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcC-----CCC-CccH--HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNE-----DYR-SPAV--PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~-----~~~-~~~~--~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
++-.|++....++.+++|++++..+.. .|. .+.+ .+.+++.|+.+|+++|+++.+ |+||+|+|+++++++.
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~d-IiFts~ATEs~Nlvl~ 120 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSD-IVFTSGATESNNLVLK 120 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCc-EEEeCCchHHHHHHHH
Confidence 357899999999999999999998432 122 2443 344899999999999999877 9999999999999997
Q ss_pred cc-CCCCC----eEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 79 NT-LSPGD----RIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 79 ~~-~~~gd----~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
.. ...+| +|+++..+|.+.. +....+..|++++.+|++.++.+|.+.+++.++. +|+++.+.+.+|..|+
T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~----~T~lv~I~~Vnn~~gv 196 (428)
T KOG1549|consen 121 GVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRS----KTRLVSIMHVNNEIGV 196 (428)
T ss_pred HhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCC----CceEEEEEecccCccc
Confidence 74 33445 8999999888887 5566777889999999998888999999999984 6799999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhc--cCCCCcc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK--TAKSVRV 230 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~--~~~~~~~ 230 (401)
+.|+++|.++|++ +++.+++|+||+.|..+.|..++++|++++|.|||+ |++|+|+++++++. .++. +....+
T Consensus 197 ~~Pv~EI~~icr~--~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~~~-~~~~~~p~~~GG- 271 (428)
T KOG1549|consen 197 LQPVKEIVKICRE--EGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIY-GPPGIGALYVRRKR-PRLRVEPPLSGG- 271 (428)
T ss_pred cccHHHHHHHhCc--CCcEEEeehhhhcCCccccHHHcCchheeeeccccc-CCCcceEEEEccCC-CcccccCcccCC-
Confidence 9999999999999 999999999999999999999999999999999988 57789999999821 1111 111111
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCcee
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTV 308 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~ 308 (401)
-..+.++.| |.....+..+.+|.+...++. ........++.+.+...+.. . .....+..+. ..+..
T Consensus 272 -----gq~r~~rsG-----T~~~~~~~~~gsA~e~~~~~~-~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~-~~~~~ 339 (428)
T KOG1549|consen 272 -----GQERGLRSG-----TVATPLAVGLGSAAEFVNKEM-AYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKS-RYPGL 339 (428)
T ss_pred -----ccccccccC-----CcCchhhhhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHhhhCchhhccCCccc-ccccc
Confidence 111334445 578888889999999887654 23333333455555554433 2 2222222111 22334
Q ss_pred EEEEcC--CCCCHHHHHHHHHhhCCeE-----EccC-------C-CCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 309 TAVIVP--SHINSSEIVRRAWQRYNLS-----LGLG-------L-NKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 309 ~~~~~~--~~~~~~~l~~~L~~~~~i~-----v~~g-------~-~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+.+| ++.....-.+.+.-+-+.. +.|. . .......+|||+.-+++++|++++++.+++.++.+
T Consensus 340 ~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~ 419 (428)
T KOG1549|consen 340 VSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLL 419 (428)
T ss_pred eeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhc
Confidence 555554 2221110000000000111 0111 1 11223569999888999999999999999887643
No 40
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=2.6e-30 Score=245.19 Aligned_cols=329 Identities=15% Similarity=0.111 Sum_probs=244.8
Q ss_pred ccCCCcCChHHHHHHHccCcCC----CC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC----CC
Q 015729 13 FVPGPVHIPDQVIRAMNRNNED----YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL----SP 83 (401)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~~~----~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~----~~ 83 (401)
|+...++..+.+++++.++... .. .+...+...++++.+++++|.+.+. +++++|+++++..++.++. ++
T Consensus 25 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~ggt~a~~~a~~~~~~~~~~~ 103 (371)
T PRK13520 25 LSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAY-GYITSGGTEANIQAVRAARNLAKAE 103 (371)
T ss_pred eeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCC-eEEecCcHHHHHHHHHHHHhhccCC
Confidence 5555666777777777553321 11 1334555689999999999987654 7889999999988875543 35
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHh
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~ 163 (401)
+|+|++++++|++. ...++..|++++.++.+.++.+|++++++.+++ +++.+++++++|++|.+.|+++|.++|
T Consensus 104 ~~~vl~~~~~h~s~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~vi~~~~~~~tG~~~~l~~I~~l~ 177 (371)
T PRK13520 104 KPNIVVPESAHFSF--DKAADMLGVELRRAPLDDDYRVDVKAVEDLIDD----NTIGIVGIAGTTELGQVDPIPELSKIA 177 (371)
T ss_pred CceEEecCcchHHH--HHHHHHcCceEEEecCCCCCcCCHHHHHHHHhh----CCEEEEEEcCCcCCcccCCHHHHHHHH
Confidence 78999999988764 466778899999999888778999999999975 457777888889999999999999999
Q ss_pred hhcCCCcEEEEecccccCcce-------eccCcccceEEEecCCCcccCCCcceEEEe-cHHHHHHhccCCCCccccchH
Q 015729 164 DEYRHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALSLPTGMGIVCA-SPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~ 235 (401)
++ +|+++++|++|+.+..+ ++....++|.+.+|+||+..++.++|++++ +++..+.+.... ......
T Consensus 178 ~~--~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~-~~~~~~-- 252 (371)
T PRK13520 178 LE--NGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDT-PYLTSK-- 252 (371)
T ss_pred HH--cCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccC-ccccCC--
Confidence 99 99999999999866433 233345789999999998766667776665 555666553211 000000
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
......+|++...++++.++++.+.+.|+++..++..++++++.+.|+++|+++.... .. .++.+.++
T Consensus 253 -------~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~---~~-~~v~~~~~- 320 (371)
T PRK13520 253 -------KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP---VL-NIVAFDDP- 320 (371)
T ss_pred -------CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC---Cc-eEEEEecC-
Confidence 0001123455556788899999887778888999999999999999998888733221 22 36667764
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 316 HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 316 ~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+..++.+.|.++ ||.+..+. .++.+|+++..++|++|+++++++|+++++
T Consensus 321 --~~~~v~~~L~~~-gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 321 --NPDEVREKLRER-GWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred --CHHHHHHHHHHC-CceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 577899999876 99887653 246799998888899999999999998764
No 41
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=3.1e-30 Score=242.68 Aligned_cols=331 Identities=14% Similarity=0.129 Sum_probs=246.3
Q ss_pred CCCCCCCCcccccCCCcCChHHHHHHHccCcCCCCC----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 2 DYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
+|++++++.||-.+-|..+-+++.+++.++...+.+ ....+...++++.+++++|.+. .+++++|++++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~iv~~sg~~a~~~~~ 78 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA---ALVFSSGYAANDGVL 78 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC---EEEeccHHHHHHHHH
Confidence 588999999999998877777777777654322111 2346778899999999999854 566677889998888
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC-CCCceEEEEEecCCCcccccch
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT-AHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~-~~~~~~i~~~~~~n~tG~~~~l 156 (401)
.+++++||+|++..+.|++.. ..++..|++++.++. .|++.+++.+++.. ..+++++++++++|++|...|+
T Consensus 79 ~~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 79 STLAGKGDLIISDSLNHASII--DGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred HHhcCCCCEEEEehhhhHHHH--HHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCH
Confidence 888899999999988777643 345668998887752 47888999887531 1356888999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcce--------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAID--------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~ 228 (401)
++|.++|++ +|+++|+|++|+.|... .+....+.|++++|.||+++ ++| |+++.++++.+.+.....
T Consensus 152 ~~i~~~~~~--~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~g-G~i~~~~~~~~~~~~~~~- 226 (349)
T cd06454 152 PELVDLAKK--YGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVG-GYIAGSKELIDYLRSYAR- 226 (349)
T ss_pred HHHHHHHHH--cCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccC-CEEECCHHHHHHHHHhch-
Confidence 999999999 99999999999866442 22234578999999999985 555 888888888776543211
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
.+. +.++.+...++++.++++...+ .+..++++.++.+++.+.|.++|++...+. ...+
T Consensus 227 -----------~~~----~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~~~~ 285 (349)
T cd06454 227 -----------GFI----FSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSP----SHII 285 (349)
T ss_pred -----------hhh----ccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC----CCcE
Confidence 000 1123556666777888877655 366788999999999999998887765432 2233
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
.++.++++.+..++.+.|.++ ||.+.++... ..++++|+++..+++++|+++++++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 444444344677899999877 9998875321 12468999998889999999999999764
No 42
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=1.1e-29 Score=240.01 Aligned_cols=330 Identities=12% Similarity=0.120 Sum_probs=236.6
Q ss_pred CcCChHHHHHHHccCcCCCCC---------ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 17 PVHIPDQVIRAMNRNNEDYRS---------PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~---------~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
...+.+++.+++.++.....+ ......+.++++.+++++|.+. +.+++|+++++..++.+++++||+|
T Consensus 17 ~g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~---~~i~~g~~~a~~~~~~~l~~~gd~V 93 (370)
T TIGR02539 17 GGVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE---ARVTHGAREGKFAVMHALCKEGDWV 93 (370)
T ss_pred CCCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCc---eEEECChHHHHHHHHHHhhCCCCEE
Confidence 456778888888886543211 1122357788999999999975 5678999999999999999999999
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccC---CCCceEEEEEecCCCcccccchHHHHHH
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADT---AHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~---~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
++..+.|++.. ..++..|++++.++.+. ++.+|++++++.+++.+ .+++++|++++++|++|.+.|+++|.++
T Consensus 94 l~~~~~h~s~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~l 171 (370)
T TIGR02539 94 VLDGLAHYTSY--VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKV 171 (370)
T ss_pred EECCcccHHHH--HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHH
Confidence 99888888765 45688899999999763 45789999999986421 0257899999999999999999999999
Q ss_pred hhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhh
Q 015729 163 LDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
|++ +|+++|+|++|+.|..+.+....++|+++.|+||+++++.++|++++++++++.+...... +.+..
T Consensus 172 a~~--~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~---~~~~~------ 240 (370)
T TIGR02539 172 CRE--KGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRY---SPVKE------ 240 (370)
T ss_pred HHH--cCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccC---Cccce------
Confidence 999 9999999999999876656556678999999999997656689999999998887654321 11000
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC------
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH------ 316 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------ 316 (401)
..++..++....++++.++++...+ .++. ..+..++.+++++.|+++|+++....+. .+ .++.+.+|.-
T Consensus 241 -~~~~~~~~~~~~~~~~~~al~~~~~-~l~~-~~~~~~~~~~l~~~L~~~g~~~~~~~~s-~t-~~v~~~~~~~~~~~~~ 315 (370)
T TIGR02539 241 -VELLGCTSRGAPIVTMMASFPHVVE-RVKR-WDEEVKKTRWFVAELEDIGFIQLGQKPK-EH-DLVKFETPGFHEIAQK 315 (370)
T ss_pred -eeeecccccccHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHhCCcEEEccCCC-cC-ceEEEECCchhHHhhh
Confidence 0001112222233445555553222 2222 3334455678999999999887532222 23 3555666421
Q ss_pred --CCHHHHHHHHHhhCCeE-EccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 --INSSEIVRRAWQRYNLS-LGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 --~~~~~l~~~L~~~~~i~-v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+...+.+.|.++ ||. ++++ ..+++|+++. ..+++|+++++++|+++++++
T Consensus 316 ~~~~~~~~~~~L~e~-GI~~ir~~----~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 316 HKRRGYFLYEELKKR-GIHGIRSG----QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred hccccHHHHHHHHhC-CCccccCC----cceEEEEEec-CCCHHHHHHHHHHHHHHHHhc
Confidence 1234688888877 996 5532 2458999875 469999999999999988763
No 43
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=1e-29 Score=242.91 Aligned_cols=334 Identities=15% Similarity=0.104 Sum_probs=238.3
Q ss_pred CCCCCCcccccCCCcCChHHHHHHHccCcCCC-CC---ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 4 MYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDY-RS---PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 4 ~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~-~~---~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
..+.++.|+..+.+..+-+++.+++.++.... .+ .+..+...++++.+++++|.+. +++++|+++|+..++.+
T Consensus 41 i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~---~ii~~~~~~a~~~~~~~ 117 (393)
T TIGR01822 41 LNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTED---TILYASCFDANGGLFET 117 (393)
T ss_pred EEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc---EEEECchHHHHHHHHHH
Confidence 34455556555545555555566665532211 11 1235667899999999999854 66678899999998888
Q ss_pred cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCC--CceEEEEEecCCCcccccchH
Q 015729 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAH--TIKAICIVHNETATGVTNNLS 157 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~--~~~~i~~~~~~n~tG~~~~l~ 157 (401)
++++||.|++..+.|++.. ...+..+.+.+.+. ..|++++++.+++.... ++++|++.+++|++|.+.|++
T Consensus 118 l~~~gd~vi~~~~~~~s~~--~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~ 190 (393)
T TIGR01822 118 LLGAEDAIISDALNHASII--DGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLD 190 (393)
T ss_pred hCCCCCEEEEeccccHHHH--HHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHH
Confidence 9999999999999888765 23455666554443 25899999998752112 678899998999999999999
Q ss_pred HHHHHhhhcCCCcEEEEecccccCccee---------ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAIDF---------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~ 228 (401)
+|.++|++ +|+++|+|++|+.|.... +.. .++|++++|.||+++|+ ..|++++++++.+.+......
T Consensus 191 ~i~~la~~--~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~-r~G~~~~~~~~~~~l~~~~~~ 266 (393)
T TIGR01822 191 EICDLADK--YDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGA-SGGFTTARKEVVELLRQRSRP 266 (393)
T ss_pred HHHHHHHH--cCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCC-CcEEEEeCHHHHHHHHHhCcc
Confidence 99999999 999999999998664321 111 25899999999999755 459999999888776542110
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
..+.++.+...++++.++++... +.++.++++.++.+++.+.|++.|+++..+ .. .+
T Consensus 267 ----------------~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~-~~ 323 (393)
T TIGR01822 267 ----------------YLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKPA----DH-PI 323 (393)
T ss_pred ----------------ceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC----CC-CE
Confidence 01122345555566677776653 346788899999999999998888776432 12 24
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.+.+++..+..++++.|.++ ||.+.....+ .....+|+++..+++++|+++++++|+++++++|.
T Consensus 324 ~~i~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~~~ 392 (393)
T TIGR01822 324 IPVMLYDAVLAQRFARRLLEE-GIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRELGV 392 (393)
T ss_pred EEEEeCCHHHHHHHHHHHHHC-CeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 555554434567899999877 9988733222 12245999988889999999999999999988764
No 44
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-30 Score=244.02 Aligned_cols=323 Identities=12% Similarity=0.137 Sum_probs=225.7
Q ss_pred cCChHHHHHHHccCcCC--CCCcc----HHHHHHHHHHHHHHHhcCC-CC-ceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 18 VHIPDQVIRAMNRNNED--YRSPA----VPALTKTLLEDIKKIFKTT-SG-TPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~----~~~~~~~l~~~la~~~g~~-~~-~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
...++.+.+++.+.... ..+|. ..++.+.+.+.+++.+|.+ .+ +++++++|+++++..++.+++++||+|++
T Consensus 52 ~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv 131 (405)
T PRK06207 52 HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAI 131 (405)
T ss_pred CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEE
Confidence 34556666666653221 11222 3334444444555555753 33 56999999999999999999999999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCC-----CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHH
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDW-----GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRK 161 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~-----~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~ 161 (401)
++|+|+.+. ..++..|++++.++++. ++.+|++++++++++ +++++++++|+||||.+++ +++|.+
T Consensus 132 ~~P~y~~~~--~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~----~~k~v~l~~P~NPTG~~~s~e~l~~l~~ 205 (405)
T PRK06207 132 VQPDYFANR--KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA----GVRVFLFSNPNNPAGVVYSAEEIAQIAA 205 (405)
T ss_pred eCCCchhHH--HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh----cCeEEEECCCCCCCCcCCCHHHHHHHHH
Confidence 999887654 56788899999998752 467899999998874 5689999999999999997 566888
Q ss_pred HhhhcCCCcEEEEecccccCcc----eecc---C-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 162 LLDEYRHPALFLVDGVSSICAI----DFRM---D-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~----~~~~---~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+|++ +|++||+|++|..... .... . .....+++.|.+|.++ .+.++|+++.++++.+++.....
T Consensus 206 ~a~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~----- 278 (405)
T PRK06207 206 LARR--YGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQA----- 278 (405)
T ss_pred HHHH--cCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHHh-----
Confidence 8888 9999999999875321 1111 1 1234588999999985 33447999999988777654211
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 311 (401)
. +..+.+.....++..+++.- ...+++..+++.++++.+.+.|+++ ++++..+ ..+.++|+
T Consensus 279 --------~-----~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~gg~fl~~ 340 (405)
T PRK06207 279 --------I-----VSLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAP----QAGSYLFP 340 (405)
T ss_pred --------H-----hccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----CeeEEEEE
Confidence 0 01112333333333333210 1125666777788888888888876 6665543 23568889
Q ss_pred EcCC-CCCHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 312 IVPS-HINSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 312 ~~~~-~~~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++|. ..+..++.+.|.+++||.+.+|.. ...++++||++.. +++++++++++|.+.++++
T Consensus 341 ~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 341 RLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred eCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 9864 357788999998666999999953 2235789998875 7899999999999988764
No 45
>PRK07324 transaminase; Validated
Probab=99.98 E-value=1.1e-29 Score=240.15 Aligned_cols=315 Identities=17% Similarity=0.120 Sum_probs=223.6
Q ss_pred HHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHH
Q 015729 22 DQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWID 101 (401)
Q Consensus 22 ~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~ 101 (401)
++..+++..... .+.......++|+.++++++.-.++++++++|+++|+..++.+++.+||+|+++.|+|.+.. .
T Consensus 45 ~~~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~--~ 119 (373)
T PRK07324 45 EAFYQELGQKKL---TYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY--D 119 (373)
T ss_pred HHHHHHHhcCCc---cCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH--H
Confidence 555566554222 23333456699999999986433355999999999999999999999999999999766543 5
Q ss_pred HHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEec
Q 015729 102 QQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 102 ~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~ 176 (401)
.++..|++++.++++.+ +.+|++++++.+. +++|++++++|+||||.+++ +++|.++|++ +|++||+|+
T Consensus 120 ~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~----~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~--~~~~ii~De 193 (373)
T PRK07324 120 IPESLGAEVDYWQLKEENGWLPDLDELRRLVR----PNTKLICINNANNPTGALMDRAYLEEIVEIARS--VDAYVLSDE 193 (373)
T ss_pred HHHHcCCEEEEEecccccCCCCCHHHHHHhCC----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHH--CCCEEEEEc
Confidence 67889999999998754 3579999998876 35799999999999999998 7788899999 999999999
Q ss_pred ccccCcce---ecc-CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 177 VSSICAID---FRM-DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 177 a~~~~~~~---~~~-~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
++...... ... ......+.+.|.+|.++ .+.++|++++++++++.+...+... ..+.
T Consensus 194 ~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~------------------~~~~ 255 (373)
T PRK07324 194 VYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYT------------------MICA 255 (373)
T ss_pred cccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcE------------------EecC
Confidence 97643211 011 11123578889999885 2334699999988877765432110 1122
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhC
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRY 330 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 330 (401)
+.....++..+++.. +.-+++.++.++++.+.+.+.|.+. ++....+. .+.++++.++.+.+..+++++|.++.
T Consensus 256 ~~~~q~~a~~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~----gg~~~~i~~~~~~~~~~~~~~ll~~~ 330 (373)
T PRK07324 256 GVFDDMLASLALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK----AVSTSFVKLDVDMPSEDFCLKLLKET 330 (373)
T ss_pred ChHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCC----ceEEEEEEeCCCCCHHHHHHHHHHhc
Confidence 332223333344321 1124566677778888888888776 55544432 23455666655567889999987666
Q ss_pred CeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 331 NLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 331 ~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
||.+.+|......+++||++.. +++.+++++++|++++++
T Consensus 331 gv~v~pg~~F~~~~~iRis~~~--~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 331 GVLLVPGNRFDLEGHVRIGYCC--DTETLKKGLKKLSEFLRE 370 (373)
T ss_pred CEEEECccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 9999999654456799998765 689999999999999875
No 46
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.98 E-value=4.1e-29 Score=237.76 Aligned_cols=332 Identities=16% Similarity=0.136 Sum_probs=238.2
Q ss_pred CCCcccccCCC-cCChHHHHHHHccCcC--CC--C--CccHHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHH
Q 015729 7 PGKNHLFVPGP-VHIPDQVIRAMNRNNE--DY--R--SPAVPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 7 ~~~~~~~~~~p-~~~~~~v~~a~~~~~~--~~--~--~~~~~~~~~~l~~~la~~~g~~--~~~~i~~~~g~t~a~~~~~ 77 (401)
++...|..+-| .++++.+.+++.+... .. + ..+..+....+++.+++.+|.+ +++.+++++|+++++..++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence 34445555444 4577778888766321 11 1 1234566777888888888864 2456999999999999888
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
.+++.+||+|++++|+|+.+. ..++..|++++.++.+.++.+|++++++.+++ +++++++++++||||.+++
T Consensus 107 ~~~~~~gd~Vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~klv~~~~p~NPtG~~~~~~ 180 (389)
T PRK05957 107 LAITDPGDEIILNTPYYFNHE--MAITMAGCQPILVPTDDNYQLQPEAIEQAITP----KTRAIVTISPNNPTGVVYPEA 180 (389)
T ss_pred HHhcCCCCEEEEeCCCCcCHH--HHHHhcCCEEEEeecCCCCCcCHHHHHHhcCc----CceEEEEeCCCCCCCcCcCHH
Confidence 888999999999999877654 34577899999999887778999999998863 5799999999999999998
Q ss_pred -hHHHHHHhhhcCCCcEEEEecccccCcce-------ecc-CcccceEEEecCCCcccCCCc--ceEEEecHHHHHHhcc
Q 015729 156 -LSKVRKLLDEYRHPALFLVDGVSSICAID-------FRM-DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKT 224 (401)
Q Consensus 156 -l~~i~~l~~~~~~~~~li~D~a~~~~~~~-------~~~-~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~ 224 (401)
+++|.++|++ +|++||+|+++...... ... +.....+++.|.+|.+ |.+| +|++++++++.+++..
T Consensus 181 ~~~~i~~~a~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~~~~~~~ 257 (389)
T PRK05957 181 LLRAVNQICAE--HGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAY-GFASWRIGYMVIPIHLLEAIKK 257 (389)
T ss_pred HHHHHHHHHHH--cCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhc-cCccceeEEEecCHHHHHHHHH
Confidence 7788999999 99999999998633211 011 1223468889999988 4555 7999999998777654
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHc-CC-ccccCC
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE--GLENVIERHRRLGKATRLAVEAW-GL-KNCTQK 300 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~--g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~ 300 (401)
... . +..+++.. ++..+...+.+. .+++.++++.++++.+.+.|+++ ++ .+..+
T Consensus 258 ~~~-------------~-----~~~~~~~~---~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~- 315 (389)
T PRK05957 258 IQD-------------T-----ILICPPVV---SQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPA- 315 (389)
T ss_pred HHh-------------h-----cccCCCcH---HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC-
Confidence 210 0 01123332 223333333321 25667777888899999999886 43 33322
Q ss_pred CccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 301 EEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..+.++|++++.+.+..++++.|.+++||.+.+|... ..++++||++.. .+++++++++++|.+.++++
T Consensus 316 ---~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 316 ---NGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred ---CeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 3456788888777788899999986669999999532 224689998644 57899999999999888754
No 47
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.98 E-value=2.9e-29 Score=238.15 Aligned_cols=301 Identities=14% Similarity=0.135 Sum_probs=226.7
Q ss_pred ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC------CCCCeEEEEcCCcchHHHHHHHHHcCCcEE
Q 015729 38 PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------SPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (401)
+...+...++++.+++++|.++.+ +++++|+++++..++.++. ++||+|+++.++|++. ...++..|++++
T Consensus 55 ~~~~~~~~~~~~~la~~~g~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~--~~~~~~~G~~~~ 131 (373)
T TIGR03812 55 PGTKKIEEEVVGSLGNLLHLPDAY-GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSF--EKAAEMLGLELR 131 (373)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCC-eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHH--HHHHHHcCCeEE
Confidence 345566789999999999997654 6778899999887765432 4678999999988764 456788899999
Q ss_pred EEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcce-------
Q 015729 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID------- 184 (401)
Q Consensus 112 ~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~------- 184 (401)
.++.+.++.+|++++++.+++ ++..+++..++|+||.+.|+++|.++|++ +|+++|+|++|+.+..+
T Consensus 132 ~v~~~~~~~~d~~~l~~~l~~----~~~~vv~~~~~~~tG~~~~~~~i~~l~~~--~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 132 YAPLDEDYTVDVKDVEDLIDD----NTIGIVGIAGTTELGQIDDIEELSKIALE--NGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred EEeeCCCCCcCHHHHHHHHhh----CcEEEEEECCCCCCCccCCHHHHHHHHHH--cCCeEEEEcCchhHHHHHHhcCCC
Confidence 999988888999999999975 33445555578999999999999999999 99999999999865432
Q ss_pred ---eccCcccceEEEecCCCcccCCCcce-EEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHH
Q 015729 185 ---FRMDEWGIDVALTGSQKALSLPTGMG-IVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLR 260 (401)
Q Consensus 185 ---~~~~~~~~di~~~s~~K~l~g~~g~G-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~ 260 (401)
++....++|++.+|+||+..++.++| +++.+++..+.+.... . +... .....+.++++...++++.
T Consensus 206 ~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~~-~--~~~~-------~~~~~~~gt~~~~~~~~~~ 275 (373)
T TIGR03812 206 PPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVDA-P--YLTV-------KKQATITGTRSGASAAATY 275 (373)
T ss_pred CCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcccC-c--ccCC-------CCCcceEeechhHHHHHHH
Confidence 33334578999999999765666666 4556777776653211 1 1000 0000112357777788899
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC
Q 015729 261 AALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK 340 (401)
Q Consensus 261 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~ 340 (401)
++++.+.++|+++..++..++++++++.|+++|+..... + .. .++.+.+| +..++.+.|.++ ||.++.+.
T Consensus 276 ~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~-~~-~~v~~~~~---~~~~v~~~L~~~-gi~v~~~~-- 345 (373)
T TIGR03812 276 AVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIE--P-VL-NIVAFEVD---DPEEVRKKLRDR-GWYVSVTR-- 345 (373)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC--C-Cc-eEEEEEeC---CHHHHHHHHHHC-CceeccCC--
Confidence 999988788889999999999999999999987654332 1 23 35556664 356899999876 99987653
Q ss_pred CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 341 VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 341 ~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+.++|+++..++|++|+|+++++|++
T Consensus 346 -~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 346 -CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 246899999988999999999999975
No 48
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.98 E-value=1.5e-29 Score=241.69 Aligned_cols=316 Identities=13% Similarity=0.050 Sum_probs=226.5
Q ss_pred CChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhc----C--CCCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK----T--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g----~--~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
+.++.+.+++.+.... .+++. .....++|+.++++++ . ++++++++|+|+++|+..++.+++++||+|+++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~ 123 (399)
T PRK07681 45 PPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVP 123 (399)
T ss_pred CCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEC
Confidence 4567777777764322 12222 2456678888888775 2 332569999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
+|+|+.+. ..++..|++++.++++++ +.+|++++++.+. ++++++++++|+||||.+++ +++|.++|++
T Consensus 124 ~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~ 197 (399)
T PRK07681 124 DPGYTAYE--TGIQMAGATSYYMPLKKENDFLPDLELIPEEIA----DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKK 197 (399)
T ss_pred CCCccchH--HHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc----ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHH
Confidence 99877654 557789999999998754 3569999988876 35799999999999999998 5668888888
Q ss_pred cCCCcEEEEecccccCcce----e---ccC-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 166 YRHPALFLVDGVSSICAID----F---RMD-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~----~---~~~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+|++||+|++|...... . ... .....+++.|.+|.++ .+.++|+++.++++.+.+.....
T Consensus 198 --~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~--------- 266 (399)
T PRK07681 198 --HNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKS--------- 266 (399)
T ss_pred --cCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHh---------
Confidence 99999999998743211 1 111 1234688899999984 33347999999988776653210
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
...++.+.....++.++++.-. ..+++.++.++++++.+.+.|++.|+++..+ ..+.++|+.+|++
T Consensus 267 ---------~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p----~~g~f~~~~l~~~ 332 (399)
T PRK07681 267 ---------NTDYGVFLPIQKAACAALRNGA-AFCEKNRGIYQERRDTLVDGFRTFGWNVDKP----AGSMFVWAEIPKG 332 (399)
T ss_pred ---------hcccCCCHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CeeeEEEEECCCC
Confidence 0112243433333333333211 1256667778888889999998888765433 2456888999777
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 317 INSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+..++...|.+++||.+.+|... ...+++||++.. +++++++++++|++
T Consensus 333 ~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~l~~l~~ 384 (399)
T PRK07681 333 WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ--DEEVLQQAVENIRN 384 (399)
T ss_pred CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 778899999987669999998432 224689998764 78999999999987
No 49
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=3.5e-29 Score=239.84 Aligned_cols=333 Identities=14% Similarity=0.111 Sum_probs=241.8
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCC-C---CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNED-Y---RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~-~---~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
+.++.++.||....-..+-+++.+++.+.+.. + ..........++++.+++++|.+. +++++||++|+..++.
T Consensus 56 ~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~---~~~~~sG~~An~~~l~ 132 (407)
T PRK07179 56 AIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES---CLLCQSGWAANVGLLQ 132 (407)
T ss_pred EEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHH
Confidence 34667788888886555566666666554211 1 111122467789999999999864 6789999999999999
Q ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHH
Q 015729 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK 158 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~ 158 (401)
++..+||.|++...+|.+.. ..++..|++++.++. .|+++++++++++ ++++|++++++|++|.+.|+++
T Consensus 133 ~l~~~g~~v~~~~~~h~s~~--~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~---~~~lV~v~~v~n~tG~i~pl~~ 202 (407)
T PRK07179 133 TIADPNTPVYIDFFAHMSLW--EGVRAAGAQAHPFRH-----NDVDHLRRQIERH---GPGIIVVDSVYSTTGTIAPLAD 202 (407)
T ss_pred HhCCCCCEEEEECCcCHHHH--HHHHHCCCeEEEecC-----CCHHHHHHHHHhc---CCeEEEECCCCCCCCccccHHH
Confidence 99999999999888877664 334556777665542 3899999999742 3588899999999999999999
Q ss_pred HHHHhhhcCCCcEEEEecccccCcce---------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
|.++|++ +|+++|+|++|+.|... ++.. .++|+++.|.+|+++ + ++|++++++++.+.+......
T Consensus 203 I~~l~~~--~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g-~-~~G~l~~~~~~~~~~~~~~~~- 276 (407)
T PRK07179 203 IVDIAEE--FGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFA-G-RAGIITCPRELAEYVPFVSYP- 276 (407)
T ss_pred HHHHHHH--cCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhh-c-cCeEEEeCHHHHHHHHHhCcC-
Confidence 9999999 99999999999876421 1111 246999999999995 4 369999998876655422110
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeE
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (401)
+ .+.++.+...++++.++++.+... +..+++++++.+++++.|+++|+++.. .+ .++
T Consensus 277 --------------~-~~~~t~~~~~~aa~~aal~~~~~~--~~~~~~l~~~~~~l~~~L~~~g~~v~~-----~~-~i~ 333 (407)
T PRK07179 277 --------------A-IFSSTLLPHEIAGLEATLEVIESA--DDRRARLHANARFLREGLSELGYNIRS-----ES-QII 333 (407)
T ss_pred --------------e-eeCCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCC-----CC-CEE
Confidence 0 113345566666777778776442 567889999999999999998876653 12 466
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCCC
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVK 378 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~~ 378 (401)
++.++...+...+.+.|.++ ||.+.....+ ...+.+||++...+|++|+++++++|++++++.++++-
T Consensus 334 ~l~~~~~~~~~~~~~~L~~~-GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~~~~ 404 (407)
T PRK07179 334 ALETGSERNTEVLRDALEER-NVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEVDLWFW 404 (407)
T ss_pred EEEeCCHHHHHHHHHHHHHC-CceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCcC
Confidence 67764333456677788766 9874322211 12468999999999999999999999999998877643
No 50
>PRK02769 histidine decarboxylase; Provisional
Probab=99.97 E-value=5.8e-29 Score=232.99 Aligned_cols=327 Identities=17% Similarity=0.142 Sum_probs=247.4
Q ss_pred CcccccCCCcCChHHHHHHHccCc----CC-CC----CccHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNN----ED-YR----SPAVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~----~~-~~----~~~~~~~~~~l~~~la~~~g~~~~~-~i~~~~g~t~a~~~~~~ 78 (401)
+.++..|.....+.+.++.+.... .. .. +....+..+++++.+++++|.++++ ..++|+|||+++..++.
T Consensus 23 ~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~ 102 (380)
T PRK02769 23 YFNVGYPEAADFDYSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCY 102 (380)
T ss_pred hcccCCCchhhcCHHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHH
Confidence 455556666655444444443321 11 11 1134567889999999999997544 35899999999887664
Q ss_pred cc--CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 79 NT--LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 79 ~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
.. +.++++|+++..+|++.. +.++..|++.+.|+.++++.+|+++|++++++++ .+|.+|++++++|.+|.+.|+
T Consensus 103 ~ar~~~~~~~ii~s~~~H~Sv~--ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~-~~t~lvv~t~gtt~tG~idpi 179 (380)
T PRK02769 103 LARELFPDGTLYYSKDTHYSVS--KIARLLRIKSRVITSLPNGEIDYDDLISKIKENK-NQPPIIFANIGTTMTGAIDNI 179 (380)
T ss_pred HHHHhCCCcEEEeCCCceehHH--HHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCC-CCcEEEEEEeCCCCCcccCCH
Confidence 32 457789999999999875 5677889988999988888899999999998763 568999999999999999999
Q ss_pred HHHHHHhhhcCCC---cEEEEecccccCcce-------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCC
Q 015729 157 SKVRKLLDEYRHP---ALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAK 226 (401)
Q Consensus 157 ~~i~~l~~~~~~~---~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~ 226 (401)
++|.++|++ +| +++++|+|++.+..+ +++.. ++|.+++|+||++++|.|+|+++++++..+.+...
T Consensus 180 ~~I~~i~~~--~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~- 255 (380)
T PRK02769 180 KEIQEILKK--IGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVD- 255 (380)
T ss_pred HHHHHHHHH--hCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccC-
Confidence 999999999 76 799999999988775 56655 89999999999998899999999999887765431
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
..|... . ...+.+|.+...+++++++++.+...|+++..++..++++++.+.|++.|++++... .+.
T Consensus 256 --~~yl~~------~--d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p---~~~ 322 (380)
T PRK02769 256 --VDYIGS------R--DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNP---NSI 322 (380)
T ss_pred --ccccCC------C--CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---Cce
Confidence 112110 0 112355687778899999999999999999999999999999999998888887632 233
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
++.|..|. .++. + |..+.+- ...+|+.+...++++.+|.+++.+.+.+.
T Consensus 323 -~v~f~~~~----~~~~----~--~w~l~~~-----~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 323 -TVVFPCPS----ERIW----K--KWHLATS-----GNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred -EEEEcCCC----HHHH----h--CeeEccc-----CCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 45555432 2332 2 4333211 34899999999999999999999988765
No 51
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=2.4e-29 Score=240.56 Aligned_cols=319 Identities=17% Similarity=0.106 Sum_probs=226.2
Q ss_pred ChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
.++.+.+++.+.... ...|.......++|+.+++++ |.+ +.+.+++|+|+++|+..++.+++++||+|++++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P 147 (413)
T PLN00175 68 GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 147 (413)
T ss_pred CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 456666666553221 122333334556777776666 432 3335999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
.|..+ ...++..|++++.++++. ++.+|++++++++.. +++++++++|+||||.+++ +++|.++|++ +
T Consensus 148 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~----~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~--~ 219 (413)
T PLN00175 148 FYDSY--EATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS----KTRAILINTPHNPTGKMFTREELELIASLCKE--N 219 (413)
T ss_pred CchhH--HHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc----CceEEEecCCCCCCCcCCCHHHHHHHHHHHHH--c
Confidence 76554 356778899999999864 467899999999863 5799999999999999996 5668888888 9
Q ss_pred CcEEEEecccccCcce------eccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 169 PALFLVDGVSSICAID------FRMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~------~~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+++||+|++|...... ..... .+..+++.|.+|.++ .+.++|++++++++.+.+.....
T Consensus 220 ~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~------------- 286 (413)
T PLN00175 220 DVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS------------- 286 (413)
T ss_pred CcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHh-------------
Confidence 9999999998754321 11111 245788899999995 33457999999988776643210
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC-CCC-C
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP-SHI-N 318 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~~-~ 318 (401)
+...+.+.....++.++++.- +..+++.++++.++++.+.+.|++.|+.+..+ ..+.++|+.++ .+. +
T Consensus 287 -----~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p----~g~~f~~~~~~~~~~~~ 356 (413)
T PLN00175 287 -----FLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEVGFKVYPS----SGTYFVMVDHTPFGFEN 356 (413)
T ss_pred -----hccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC----CeeEEEEEeccccCCCC
Confidence 001223443334444444321 12367788889999999999999888776543 23457778773 244 4
Q ss_pred HHHHHHHHHhhCCeEEccCCCC-----CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNK-----VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~-----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
..++++.|.+++||.+.||... ...+++||++.. +++++++++++|++.++
T Consensus 357 ~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 357 DIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAVERMKTKLK 412 (413)
T ss_pred HHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 6789999887779999998432 124689998864 79999999999998875
No 52
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=3e-29 Score=238.17 Aligned_cols=321 Identities=15% Similarity=0.136 Sum_probs=225.3
Q ss_pred ChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhc----CC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK----TT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g----~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
.++.+.+++.+.... ...+.......++|+.++++++ .+ +++++++++|+++|+..++.+++++||+|++++|
T Consensus 34 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p 113 (378)
T PRK07682 34 TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEP 113 (378)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCC
Confidence 344455555442211 1122223345577777777664 32 3335999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|+.+ ...++..|.+++.++.+. ++.+|++++++++.+ +++++++++|+||||.+++ +++|.++|++
T Consensus 114 ~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~-- 185 (378)
T PRK07682 114 SFVSY--APLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA----KTKAILLCSPNNPTGAVLNKSELEEIAVIVEK-- 185 (378)
T ss_pred Cchhh--HHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc----ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHH--
Confidence 87754 356777899999888753 457899999998863 5699999999999999986 6778888998
Q ss_pred CCcEEEEecccccCccee------ccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 168 HPALFLVDGVSSICAIDF------RMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~~------~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
+++++|+|++|......- .... ....+++.|.+|.++ .+.++|++++++++++.+.....
T Consensus 186 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~------------ 253 (378)
T PRK07682 186 HDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQ------------ 253 (378)
T ss_pred cCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHH------------
Confidence 999999999987543210 1111 135688999999984 23347999999998887653210
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC-CCCC
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP-SHIN 318 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~ 318 (401)
+ ...+.+.....++..+++.- ...+++.+++++++++.+.+.|++.|+++..++ .+.++|+.++ .+.+
T Consensus 254 -~-----~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~----g~~~~~~~~~~~~~~ 322 (378)
T PRK07682 254 -Y-----SMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPG----GAFYAFPSISSTGLS 322 (378)
T ss_pred -h-----hccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCC----eeEEEEEeccCCCCC
Confidence 0 01123343333333344311 112567788889999999999999887765442 3456777763 3567
Q ss_pred HHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..++.+.|.++.||.+.+|... ..++++||++.. +++++++++++|+++++++
T Consensus 323 ~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 323 SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT--SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence 8889988875569999998432 235789998765 7899999999999998753
No 53
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.97 E-value=6.6e-29 Score=236.94 Aligned_cols=332 Identities=14% Similarity=0.054 Sum_probs=234.4
Q ss_pred CcccccCC--CcCChHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHh----cCC---CCceEEecCChhHHHHHHH
Q 015729 9 KNHLFVPG--PVHIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KTT---SGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 9 ~~~~~~~~--p~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~----g~~---~~~~i~~~~g~t~a~~~~~ 77 (401)
+.+.++.| +...++.+.+++.+... ....+. .....++|+.+++++ |.+ ++++|++|+|+++++..++
T Consensus 45 ~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~ 123 (410)
T PRK06290 45 ELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLP 123 (410)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHH
Confidence 34445443 44456667777765321 111222 245668888888876 432 3335999999999999999
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
.+++++||.|+++.|+|+.+. ..++..|++++.++++.+ +.+|++++++.+.. +++++++++|+||||.+++
T Consensus 124 ~~~~~~gd~Vlv~~P~y~~~~--~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~----~~k~i~l~nP~NPTG~v~s 197 (410)
T PRK06290 124 SCFINPGDVTLMTVPGYPVTG--THTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE----KAKLLYLNYPNNPTGAVAT 197 (410)
T ss_pred HHhCCCCCEEEEeCCCCccHH--HHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc----cceEEEEECCCCCCCcCCC
Confidence 999999999999999877653 567788999999998764 45689999988863 5799999999999999998
Q ss_pred h---HHHHHHhhhcCCCcEEEEecccccCcce---e---ccC-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhcc
Q 015729 156 L---SKVRKLLDEYRHPALFLVDGVSSICAID---F---RMD-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 156 l---~~i~~l~~~~~~~~~li~D~a~~~~~~~---~---~~~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~ 224 (401)
. ++|.++|++ +|++||+|++|...... . ... ....++++.|.+|.++ .+.++|+++.++++.+.+..
T Consensus 198 ~e~l~~l~~la~~--~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~ 275 (410)
T PRK06290 198 KEFYEEVVDFAKE--NNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFAT 275 (410)
T ss_pred HHHHHHHHHHHHH--cCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHH
Confidence 4 667788888 99999999998743211 1 111 1245799999999983 23346999999988776653
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHcCCccccCCCcc
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEW 303 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 303 (401)
... .+..+.+.....++..++ .... .++.++++.++++.+.+.|++.|+.+..+
T Consensus 276 ~~~------------------~~~~~~~~~~q~aa~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p---- 330 (410)
T PRK06290 276 VKD------------------NNDSGQFIAIQKAGIYAL---DHPEITEKIREKYSRRLDKLVKILNEVGFKAEMP---- 330 (410)
T ss_pred HHh------------------ccccCCcHHHHHHHHHHh---hCcHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC----
Confidence 211 011122222223333333 2222 56678888899999999999888765543
Q ss_pred CCceeEEEEcCCCC-------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcCC
Q 015729 304 FSDTVTAVIVPSHI-------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 304 ~~~~~~~~~~~~~~-------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
..+.++|+.+|++. +..++++.|.++.++.+.++... ++++||++.. ..++++.+++++++++.|+++..
T Consensus 331 ~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 408 (410)
T PRK06290 331 GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVEF 408 (410)
T ss_pred CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhccc
Confidence 34567788887543 67789999998867777776542 5799998764 45788999999999999987754
Q ss_pred C
Q 015729 376 P 376 (401)
Q Consensus 376 ~ 376 (401)
.
T Consensus 409 ~ 409 (410)
T PRK06290 409 E 409 (410)
T ss_pred c
Confidence 3
No 54
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.97 E-value=2.3e-29 Score=236.33 Aligned_cols=318 Identities=14% Similarity=0.118 Sum_probs=230.7
Q ss_pred CcccccC--CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 9 KNHLFVP--GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 9 ~~~~~~~--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
....|+. .|.+.++++++++.+.......+.... ..++|+.++++++.+++ ++++++|+++++..++.+++++||+
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~-~~~lr~~ia~~~~~~~~-~i~~~~G~~~~l~~~~~~l~~~gd~ 97 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPD-PAELKQALADYYGVDPE-QILLGNGSDEIIELLIRAFLEPGDA 97 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCC-HHHHHHHHHHHhCcChH-HEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 3444543 377788899999987542221222112 36899999999997654 4999999999999888888899999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|++++++|..+ ...++..|++++.++.+.++.+|++++++++. ++++++++++++||||.+.|++++.++|+.+
T Consensus 98 v~~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~ 171 (346)
T TIGR01141 98 VLVPPPTYSMY--EISAKIHGAEVVKVPLDEDGQLDLEDILVAID----DKPKLVFLCSPNNPTGNLLSRSDIEAVLERT 171 (346)
T ss_pred EEEcCCCHHHH--HHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 99999975433 34567789999999998887889999999765 4679999999999999999999999999983
Q ss_pred CCCcEEEEecccccCcce---ecc-CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 167 RHPALFLVDGVSSICAID---FRM-DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~---~~~-~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
.+++++|+|++|+..... .+. .....++++.|.+|+++ ++.++|++++++++.+++.....
T Consensus 172 ~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-------------- 237 (346)
T TIGR01141 172 PEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRA-------------- 237 (346)
T ss_pred CCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccC--------------
Confidence 359999999998732211 111 11234577889999983 23347999999998877754311
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHH
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSS 320 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (401)
.++.+...+.++.++++.. ..+++.++++.++++.+++.|++. |+++... .+.++++.++. +..
T Consensus 238 ------~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-----~g~~~~~~~~~--~~~ 302 (346)
T TIGR01141 238 ------PFNLSRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYPS-----DANFVLIRFPR--DAD 302 (346)
T ss_pred ------CCCCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC-----cCCEEEEecCC--CHH
Confidence 1123333333333333321 136778888999999999999987 7775432 23577888864 678
Q ss_pred HHHHHHHhhCCeEEccCCCC-CCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 321 EIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 321 ~l~~~L~~~~~i~v~~g~~~-~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
++.++|.++ ||.+.++... ..++++|+++. +++|+++++++|+
T Consensus 303 ~~~~~L~~~-gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 303 ALFEALLEK-GIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred HHHHHHHHC-CeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 899999865 9999988542 12678999854 7899999998873
No 55
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.97 E-value=4.3e-29 Score=237.81 Aligned_cols=325 Identities=13% Similarity=0.093 Sum_probs=226.4
Q ss_pred CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhcC------CCCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKT------TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
..++.+.+++.+.... ...+.......++++.++++++. ++++++++++|+++|+.+++.+++.+||+|++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~ 122 (391)
T PRK07309 43 TTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPA 122 (391)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Confidence 3455566666543221 11232233456778888877752 2334699999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
|+|.++. ..++..|++++.++.+.+ +.+|++++++++++.+ ++++++++++|+||||.+++ +++|.++|++
T Consensus 123 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~-- 197 (391)
T PRK07309 123 PAYPGYE--PIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQG-DKLKAVILNYPANPTGVTYSREQIKALADVLKK-- 197 (391)
T ss_pred CCCcchH--HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccC-CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 9877653 567788999999998654 4689999999987532 36799999999999999986 6778888888
Q ss_pred CCcEEEEecccccCcce----eccC--cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 168 HPALFLVDGVSSICAID----FRMD--EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~----~~~~--~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+|+++|+|+++...... .+.. .....+++.|.+|.++ .+.++|++++++++++.+.....
T Consensus 198 ~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~------------- 264 (391)
T PRK07309 198 YDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQ------------- 264 (391)
T ss_pred cCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHh-------------
Confidence 99999999998753321 1111 1134588899999984 23347999999998776653210
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC--C
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI--N 318 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~ 318 (401)
+. ..+++.....++..+++... ......++++.++++.+.+.|++.|+++..+ ..+.++|+++|.+. +
T Consensus 265 ~~-----~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p----~gg~~~~~~l~~~~~~~ 334 (391)
T PRK07309 265 YL-----VTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEKMTDLGFKIIKP----DGAFYIFAKIPAGYNQD 334 (391)
T ss_pred hc-----ccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHHHHHCCCeecCC----CeeEEEEEECCCCCCCC
Confidence 00 11233333333333333211 1124456777888888999998888766554 23456778887553 4
Q ss_pred HHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 319 SSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..++++.|.++.||.+.+|.. ...++++||++.. +.+++++++++|+++++++
T Consensus 335 ~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 335 SFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 667887766556999999853 3346789998775 6889999999999998764
No 56
>PRK08960 hypothetical protein; Provisional
Probab=99.97 E-value=4.6e-29 Score=237.51 Aligned_cols=332 Identities=14% Similarity=0.058 Sum_probs=230.2
Q ss_pred CCcccccCCCc-CChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHhcc
Q 015729 8 GKNHLFVPGPV-HIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 8 ~~~~~~~~~p~-~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
+..++..+.|. ++++.+.+++.+..... ..+.......++|+.++++++ .. .++++++|+|+++|+..++.++
T Consensus 33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~ 112 (387)
T PRK08960 33 DVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLL 112 (387)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHh
Confidence 33455555555 56888888887744321 223333456688888888874 22 3456999999999999999999
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchH-
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS- 157 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~- 157 (401)
+.+||+|++++|+|+.+. ..++..|.+++.++++.+ +.+|++++++.+++ +++++++++|+||||.+++.+
T Consensus 113 ~~~gd~vlv~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p~NPtG~~~~~~~ 186 (387)
T PRK08960 113 VDPGKHWLLADPGYPCNR--HFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA----DTVGALVASPANPTGTLLSRDE 186 (387)
T ss_pred cCCCCEEEEcCCCCcchH--HHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc----cceEEEEECCCCCCCcCcCHHH
Confidence 999999999999888765 456667899999988654 36899999998874 458899999999999999855
Q ss_pred --HHHHHhhhcCCCcEEEEecccccCcce---eccCcc-cceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCc
Q 015729 158 --KVRKLLDEYRHPALFLVDGVSSICAID---FRMDEW-GIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 158 --~i~~l~~~~~~~~~li~D~a~~~~~~~---~~~~~~-~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+|.++|++ +|+++|+|++|...... ...... ...+++.|.+|.++ .+| +|++++++++++.+.....
T Consensus 187 ~~~l~~~~~~--~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~-- 261 (387)
T PRK08960 187 LAALSQALRA--RGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFG-MTGWRLGWLVAPPAAVPELEKLAQ-- 261 (387)
T ss_pred HHHHHHHHHH--cCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccC-CcccEEEEEEcCHHHHHHHHHHHh--
Confidence 56667888 99999999998643211 011111 23578899999884 444 7999999988776643210
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeE
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (401)
.+ ..+.+.....++.+++..-....+++.++++.++++.+.+.|++.|+.+... + ..+.++
T Consensus 262 ----------~~------~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~-p--~g~~f~ 322 (387)
T PRK08960 262 ----------NL------YISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVE-P--QGAFYL 322 (387)
T ss_pred ----------hh------ccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcC-C--CeeEEE
Confidence 00 1123333333333343211112356677788888899999998877654321 1 235678
Q ss_pred EEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 310 AVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 310 ~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
|+++|+ ..+..++++.|.+++||.+.+|.... .++++|+++.. +.++++.++++|+++++
T Consensus 323 ~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 323 YADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred EEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 888865 35778898888766699999984322 24689998775 67889999998887764
No 57
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=7e-29 Score=236.31 Aligned_cols=322 Identities=17% Similarity=0.132 Sum_probs=227.1
Q ss_pred CcCChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHH----hcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 17 PVHIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKI----FKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~----~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
+.+.++.+.+++.+..... ..+.......++|+.++++ +|.. .++++++++|+++|+..++..++++||+|+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~ 114 (382)
T PRK06108 35 DLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAV 114 (382)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEe
Confidence 3455777888877643221 1122223344555555555 4632 33559999999999999998899999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCC---CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWG---EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLD 164 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~---~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~ 164 (401)
.|+|+.+. ..++..|++++.++.+.+ +.+|++++++.++. +++++++++|+||||.+++ +++|.++|+
T Consensus 115 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~----~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~ 188 (382)
T PRK06108 115 TPLWPNLV--AAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP----RTRALFINSPNNPTGWTASRDDLRAILAHCR 188 (382)
T ss_pred CCCccchH--HHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc----cceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 99876553 567788999999998642 35899999998863 5689999999999999986 567888888
Q ss_pred hcCCCcEEEEecccccCcce--------eccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccch
Q 015729 165 EYRHPALFLVDGVSSICAID--------FRMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~~--------~~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
+ +|+++|+|++|+..... .+... ....+++.|.+|.++ ++.++|++++++++.+.+....
T Consensus 189 ~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~-------- 258 (382)
T PRK06108 189 R--HGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLI-------- 258 (382)
T ss_pred H--CCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHH--------
Confidence 8 99999999998754321 11211 235688999999884 2345799999998877665321
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 313 (401)
.+ . ...++.....++..+++.. ...+++.+++++++++.+.+.|+++ |+++..+ ..+.++++.+
T Consensus 259 -----~~--~---~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~~g~~~~~~l 323 (382)
T PRK06108 259 -----EY--N---TSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAKP----DGAMYAFFRI 323 (382)
T ss_pred -----Hh--c---ccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC----CeeEEEEEeC
Confidence 00 0 1123343333334444321 1125677888889999999999887 7776543 2456778888
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+...+..++++.|.+++||.+.+|.. ....+++|+++.. +++++++++++|+++++
T Consensus 324 ~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 324 PGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 76567788999987767999998843 2235789998876 89999999999988764
No 58
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.97 E-value=7.9e-29 Score=235.77 Aligned_cols=316 Identities=14% Similarity=0.084 Sum_probs=222.1
Q ss_pred CChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhc----CC--CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK----TT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g----~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
..++.+.+++.+.... ...+.......++|+.++++++ .+ .++.+++++|+++++..++..++++||+|+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~ 121 (383)
T TIGR03540 42 PTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVP 121 (383)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEe
Confidence 4466777777653211 1122223335577777777764 32 33358889999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
+|+|+.+. ..++..|++++.++.+.+ ..+|++++++.+. ++++++++++|+||||.+++ +++|.++|++
T Consensus 122 ~P~y~~~~--~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~----~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~ 195 (383)
T TIGR03540 122 DPGYPVYR--IGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA----KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKE 195 (383)
T ss_pred CCCCcchH--HHHHhcCCEEEEEecCcccCCccCHHHHHhhcc----ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHH
Confidence 99877654 457789999999998653 4569999998886 35799999999999999998 5778888998
Q ss_pred cCCCcEEEEecccccCcc----eec---cCc-ccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchH
Q 015729 166 YRHPALFLVDGVSSICAI----DFR---MDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~----~~~---~~~-~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|++||+|++|..... ... ... ....+++.|.+|.+ |.+| +|+++.++++.+++.....
T Consensus 196 --~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~i~~~~l~~~~~~~~~-------- 264 (383)
T TIGR03540 196 --YNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTY-NMTGWRIGMAVGNADLIAGLGKVKT-------- 264 (383)
T ss_pred --cCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEeccccc-CCccceeeEEeCCHHHHHHHHHHHH--------
Confidence 9999999999863221 111 111 23467889999988 4555 7999999988776643210
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
.. ..+.+.....++.++++.. ...+++.++++.++++.+.+.|++.|+.+..+ ..+.++++++|+
T Consensus 265 ----~~------~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~----~~~~~~~~~l~~ 329 (383)
T TIGR03540 265 ----NV------DSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKP----KATFYVWVPVPE 329 (383)
T ss_pred ----hc------ccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCC----CcceEEEEECCC
Confidence 00 1112332233333333321 12256678888899999999999888766543 245678889887
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 316 HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 316 ~~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
+.+..++...|.+++||.+.+|.... ..+++||++.. +++++++++++|++
T Consensus 330 ~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 330 GYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV--PDERLEEAVARIKK 382 (383)
T ss_pred CCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC--CHHHHHHHHHHHhh
Confidence 77888999998766699999984422 24689998853 67888888887753
No 59
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=1.2e-28 Score=239.17 Aligned_cols=339 Identities=14% Similarity=0.154 Sum_probs=244.0
Q ss_pred CCCCCCcccccCCC-cCChHHHHHHHccCcCCC----CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 4 MYAPGKNHLFVPGP-VHIPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 4 ~~~~~~~~~~~~~p-~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..+...+||-.+.| ...++++.+++.++.... ..+.......++++.+++++|.+. .+++ ++|..++..++.
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~-~~G~~an~~~i~ 179 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPA--AIVF-GMGYATNSTIIP 179 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCc--EEEE-CCHHHHHHHHHH
Confidence 44566788888865 557789999999976432 123456788999999999999654 2454 556777777788
Q ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC---CCC-----ce-EEEEEecCCC
Q 015729 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT---AHT-----IK-AICIVHNETA 149 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~---~~~-----~~-~i~~~~~~n~ 149 (401)
+++++||.|++.++.|.+.. ..++..|++++.++.+ |++++++.+++.. ..+ .+ ++++.+..|+
T Consensus 180 al~~~Gd~Vi~d~~~h~s~~--~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~ 252 (489)
T PLN02483 180 ALIGKGGLIISDSLNHNSIV--NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSM 252 (489)
T ss_pred HhCCCCCEEEEcchhhHHHH--HHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCC
Confidence 89999999999999888765 4567889999999855 5677776665310 011 24 4455556699
Q ss_pred cccccchHHHHHHhhhcCCCcEEEEecccccCcce---------eccCcccceEEEecCCCcccCCCcceEEEecHHHHH
Q 015729 150 TGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (401)
Q Consensus 150 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~ 220 (401)
+|.+.++++|.++|++ +|++||+|++|+.+... ++....++|++++|.+|+++ +.| |++++++++++
T Consensus 253 ~G~~~~l~~I~~la~~--~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g-~~G-G~i~~~~~li~ 328 (489)
T PLN02483 253 EGELCKLPEIVAVCKK--YKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFG-SCG-GYIAGSKELIQ 328 (489)
T ss_pred CCcccCHHHHHHHHHH--cCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcc-cCc-eEEEcCHHHHH
Confidence 9999999999999999 99999999999865421 22223467999999999994 666 99999999888
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-c---HHHHHHHHHHHHHHHHHHHHHcCCcc
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-G---LENVIERHRRLGKATRLAVEAWGLKN 296 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g---~~~~~~~~~~~~~~l~~~L~~~g~~~ 296 (401)
.+..... +..+..+.++..+.++.++++.+... + ..+.+++++++.+++++.|+++|+.+
T Consensus 329 ~l~~~~~----------------~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v 392 (489)
T PLN02483 329 YLKRTCP----------------AHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEV 392 (489)
T ss_pred HHHHhCc----------------cccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 7764321 11112234444445566777766532 1 34567889999999999999988876
Q ss_pred ccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 297 CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.... .+ .++++.+....+..++++.|+++ ||.+.+..++ .....+||++...++++|+++++++|+++++.+
T Consensus 393 ~~~~---~s-p~~~l~l~~~~~~~~~~~~Ll~~-GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 393 LGDN---DS-PVMPIMLYNPAKIPAFSRECLKQ-NVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred cCCC---CC-CEEEEEECCHHHHHHHHHHHHHC-CcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5432 12 35555543333556899999876 9988854322 223579999888899999999999999999988
Q ss_pred CCCC
Q 015729 374 GYPV 377 (401)
Q Consensus 374 ~~~~ 377 (401)
+...
T Consensus 468 ~~~~ 471 (489)
T PLN02483 468 GIKY 471 (489)
T ss_pred Ccee
Confidence 7764
No 60
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.97 E-value=7.2e-29 Score=236.22 Aligned_cols=317 Identities=14% Similarity=0.065 Sum_probs=222.8
Q ss_pred cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----g~--~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
.+.++.+.+++.+.... ...+.......++++.+++++ |. ++++.+++|+|+++|+..++..++++||+|++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~ 122 (385)
T PRK09276 43 LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLV 122 (385)
T ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEE
Confidence 34566777777664321 112222233567778887777 43 23334888999999999999999999999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhh
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLD 164 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~ 164 (401)
++|+|+.+. ..++..|++++.++.+.+ ..+|++++++.+. ++++++++++|+||||.+++. ++|.++|+
T Consensus 123 ~~P~y~~~~--~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~ 196 (385)
T PRK09276 123 PDPGYPVYK--IGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA----KKAKLMFINYPNNPTGAVADLEFFEEVVDFAK 196 (385)
T ss_pred cCCCCcChH--HHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc----ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999877654 457778999999998643 4578999988876 357999999999999999985 67788888
Q ss_pred hcCCCcEEEEecccccCcc----ee---ccCc-ccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccch
Q 015729 165 EYRHPALFLVDGVSSICAI----DF---RMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~----~~---~~~~-~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
+ +|++||+|++|..... .. .... .+..+++.|.+|.+ |.+| +|++++++++.+.+.....
T Consensus 197 ~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~i~~~~l~~~~~~~~~------- 266 (385)
T PRK09276 197 K--YDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTY-NMTGWRIGFAVGNADLIAGLGKVKS------- 266 (385)
T ss_pred H--CCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhc-CCcchhheeeeCCHHHHHHHHHHHh-------
Confidence 8 9999999999874321 11 1111 23568889999988 4555 7999999988776653210
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
.. ..+.+.....++..+++.. ...+++.++++.++++.+.+.|++.|+++..+ ..+.++++++|
T Consensus 267 -----~~------~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~~~~~v~~~ 330 (385)
T PRK09276 267 -----NV------DSGVFQAIQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP----KATFYVWAPVP 330 (385)
T ss_pred -----hc------cCCCCHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----CcceEEEEECC
Confidence 00 1112332233333343321 22356778888888999999999887766543 24456888887
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 315 SHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
++.+..++.+.|.+++||.+.+|... ...+++||++.. +++++++++++|.+
T Consensus 331 ~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 384 (385)
T PRK09276 331 KGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV--PDERIEEAVERIKK 384 (385)
T ss_pred CCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC--CHHHHHHHHHHHhh
Confidence 77788899999876669999998432 224689998753 78888888888753
No 61
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1e-28 Score=236.90 Aligned_cols=333 Identities=17% Similarity=0.136 Sum_probs=227.8
Q ss_pred CCCCcccccCCCcCChHHHHHHHccCcCCC----CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC
Q 015729 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (401)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~ 81 (401)
+..+.||-.+.+..+-+++.+++.+..... ..+...+...++++.+++++|.+. .+++++|++|+..++..+.
T Consensus 51 ~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~---~i~~~sG~~a~~~~i~~l~ 127 (410)
T PRK13392 51 WCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKES---ALLFTSGYVSNDAALSTLG 127 (410)
T ss_pred EECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCC---EEEECcHHHHHHHHHHHHh
Confidence 344556655544444444444444432211 112233457799999999999643 4555667888887776553
Q ss_pred --CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHH
Q 015729 82 --SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKV 159 (401)
Q Consensus 82 --~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i 159 (401)
.+||.|++....|++.. ..++..|++++.++.+ |.+.+++.+.....+++++|++++++||+|.+.|+++|
T Consensus 128 ~~~~g~~vi~~~~~h~s~~--~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i 200 (410)
T PRK13392 128 KLLPGCVILSDALNHASMI--EGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAI 200 (410)
T ss_pred cCCCCCEEEEehhhhHHHH--HHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHH
Confidence 47887777665555543 3456678887776532 56677777654332478999999999999999999999
Q ss_pred HHHhhhcCCCcEEEEecccccCcceec------c--CcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAIDFR------M--DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~~~~------~--~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
.++|++ +|+++|+|++|+.|..... . ....+|+++.|.+|+++ ..| |+++++++.++.+.....
T Consensus 201 ~~l~~~--~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g-~~G-G~~~~~~~~~~~l~~~~~---- 272 (410)
T PRK13392 201 CDLADR--YNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFG-CLG-GYIAASADLIDFVRSFAP---- 272 (410)
T ss_pred HHHHHH--cCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhh-ccc-chhhcCHHHHHHHHHhCc----
Confidence 999999 9999999999986543110 0 01146889999999995 555 899888888776553211
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEE
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 311 (401)
+..+..+.++..++++.++++..... ...++++.++++++++.|+++|+++..+ ..+ ++.+
T Consensus 273 ------------~~~~s~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~-~~~i 333 (410)
T PRK13392 273 ------------GFIFTTALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNANGIPVMPS----PSH-IVPV 333 (410)
T ss_pred ------------chhccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC----CCC-EEEE
Confidence 10112234445567778888866543 3456778899999999999988876543 233 3444
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.+++..+..++++.|+++.||.+.+...+ ....++|++++..+|++|+|+++++|++++++++.
T Consensus 334 ~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~~ 400 (410)
T PRK13392 334 MVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRLEL 400 (410)
T ss_pred EeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 45433245688888875569999876432 12367999999889999999999999999998887
No 62
>PRK09105 putative aminotransferase; Provisional
Probab=99.97 E-value=1.1e-28 Score=232.80 Aligned_cols=318 Identities=12% Similarity=0.029 Sum_probs=228.5
Q ss_pred CCcccccCC-CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 8 GKNHLFVPG-PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 8 ~~~~~~~~~-p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
+..++.... |.++++.+++++.+.......+.... ..++++.+++++|.+++ +|++++|+++++..++.+++++||+
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~-~~~Lr~aia~~~~v~~e-~I~it~Gs~~ai~~~~~~l~~~gd~ 121 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAALSGRYDLEL-EDDLRTLFAAQEGLPAD-HVMAYAGSSEPLNYAVLAFTSPTAG 121 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCch-HHHHHHHHHHHhCcChh-hEEEcCChHHHHHHHHHHHcCCCCE
Confidence 344455443 56678888888876432211222222 77999999999998764 5999999999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|++++|+|+.+. ..++..|++++.++.+.++.+|++++++. . .+++++++++|+||||.+++.+++.++++.+
T Consensus 122 Vli~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~----~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~ 194 (370)
T PRK09105 122 LVTADPTYEAGW--RAADAQGAPVAKVPLRADGAHDVKAMLAA-D----PNAGLIYICNPNNPTGTVTPRADIEWLLANK 194 (370)
T ss_pred EEEeCCChHHHH--HHHHHcCCeEEEecCCCCCCCCHHHHHhc-C----CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhC
Confidence 999999766553 56788999999999887778899998875 2 3568999999999999999999998888764
Q ss_pred CCCcEEEEecccccCcce---eccCccc-ceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 167 RHPALFLVDGVSSICAID---FRMDEWG-IDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~---~~~~~~~-~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+++++||+|++|...... .+....+ ..+++.|.+|++ |.+| +|+++++++.++.+...
T Consensus 195 ~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~~~~i~~l~~~--------------- 258 (370)
T PRK09105 195 PAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLY-GMAGMRLGLAAARPDLLAKLARF--------------- 258 (370)
T ss_pred CCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhh-cCCccceeeeecCHHHHHHHHhc---------------
Confidence 468999999998532211 1111112 347778999998 4555 79999999887766532
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSS 320 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (401)
+ .++.+...+.++.+++.. ...++..++++.++++.+.+.|++.|+++..+ ..+ ++++.++ .+..
T Consensus 259 ---~---~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~~~-f~~~~~~--~~~~ 323 (370)
T PRK09105 259 ---G---HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPS----QAN-CFMVDVK--RPAK 323 (370)
T ss_pred ---C---CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC----CCc-EEEEeCC--CCHH
Confidence 1 112444333333344431 22356677888899999999999888776543 233 4446663 3678
Q ss_pred HHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 321 EIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 321 ~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++.+.|.++ ||.+..++. ..++++|+++. ++++++++++++++++
T Consensus 324 ~l~~~L~~~-gI~v~~~~~-~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 324 AVADAMAKQ-GVFIGRSWP-IWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHC-CcEEecCCC-CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 899999877 999854432 23578999754 5788999999998765
No 63
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=6.5e-29 Score=237.82 Aligned_cols=343 Identities=15% Similarity=0.053 Sum_probs=232.1
Q ss_pred ccccCCCcCChHHHHHHHccCcCC--CCC-------ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHH-HHHhcc
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNED--YRS-------PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWE-SALTNT 80 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~--~~~-------~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~-~~~~~~ 80 (401)
.+...-|...+|.++++....... ++. ....+...++++.+++++|.+..+ +.++++++.+.+ .+..+.
T Consensus 24 ~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~-v~~~~~g~~~~~~~~~~~~ 102 (398)
T cd00613 24 FLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVAN-ASLQDEATAAAEAAGLAAI 102 (398)
T ss_pred cccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccc-eeccCchHHHHHHHHHHHH
Confidence 444445666666666554433311 111 224456778999999999986543 666665554444 444455
Q ss_pred CCC--CCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 81 LSP--GDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 81 ~~~--gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
+.+ ||+|+++.+.|.++. +....+..|++++.++.+.++.+|++++++++. ++++++++++++ ++|.+.|.
T Consensus 103 ~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~~t~~viv~~~~-~~G~~~~~ 177 (398)
T cd00613 103 RAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS----EEVAALMVQYPN-TLGVFEDL 177 (398)
T ss_pred hcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC----CCeEEEEEECCC-CCceecch
Confidence 665 999999999777765 222223345899999987777789999999886 357999999875 89999885
Q ss_pred -HHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCccc----CCCcceEEEecHHHHHHhccCCC----
Q 015729 157 -SKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALS----LPTGMGIVCASPKALEASKTAKS---- 227 (401)
Q Consensus 157 -~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~----g~~g~G~l~~~~~~~~~~~~~~~---- 227 (401)
++|.++|++ +|+++|+|++|+.+....+....++|++++|+||++. |++++|++++++++.+.+.....
T Consensus 178 l~~i~~la~~--~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~ 255 (398)
T cd00613 178 IKEIADIAHS--AGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTK 255 (398)
T ss_pred HHHHHHHHHh--cCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeecccc
Confidence 999999999 9999999999876665555566789999999999982 23567999999988776533210
Q ss_pred -----CccccchH--HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q 015729 228 -----VRVFFDWK--DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK 300 (401)
Q Consensus 228 -----~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 300 (401)
..+++.+. ....+++.++....+.+...+..+..++..+.+.+++++.++.+++++++++.|++++.... ..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~ 334 (398)
T cd00613 256 DAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLP-FN 334 (398)
T ss_pred ccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CC
Confidence 01111111 11122344543334444444555555566666667888999999999999999999754432 11
Q ss_pred CccCCceeEEEEcCC--CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 301 EEWFSDTVTAVIVPS--HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 301 ~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
.. .. ..+++.++. +.+..++++.|.++ ||.+.... +..++.+|++++.++|++|+|+++++|
T Consensus 335 ~~-~~-~~v~~~~~~~~~~~~~~~~~~L~~~-gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 335 GP-FF-HEFVLRLPPLYGIRAEDLAKALIDG-GFHAPTMY-LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred CC-ee-EEEEEEcCCcchHHHHHHHHhhhhc-Cccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 11 22 234567753 34577899999876 88764322 223568999999999999999998864
No 64
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=4.1e-28 Score=215.27 Aligned_cols=324 Identities=13% Similarity=0.086 Sum_probs=245.5
Q ss_pred cCChHHHHHHHccCcCCC---CCccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCC
Q 015729 18 VHIPDQVIRAMNRNNEDY---RSPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 93 (401)
.+.+|++++|+.+...+. +.+...+++..+.+..++.++.+ .++++++++|--.++..+++++.++||.|++..|.
T Consensus 37 f~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPv 116 (388)
T COG1168 37 FPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPV 116 (388)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCC
Confidence 355677888888755432 23344568889999999998876 55779999999999999999999999999999998
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCC-CC--CCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDW-GE--GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~-~~--~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
|++.+ ......|-+++..|+-+ ++ .+|.++||+++.+ .+++++++|+||||+|.+-. +.+|.++|++
T Consensus 117 Y~PF~--~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~---~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~k-- 189 (388)
T COG1168 117 YPPFY--NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD---ERVKLFILCNPHNPTGRVWTKEELRKIAELCLR-- 189 (388)
T ss_pred chHHH--HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc---CCccEEEEeCCCCCCCccccHHHHHHHHHHHHH--
Confidence 88765 56777898999988753 33 5699999999986 46799999999999999974 7778999999
Q ss_pred CCcEEEEecccccCcc------ee-ccCc--ccceEEEecCCCcccCCCcc--eEEEe-cHHHHHHhccCCCCccccchH
Q 015729 168 HPALFLVDGVSSICAI------DF-RMDE--WGIDVALTGSQKALSLPTGM--GIVCA-SPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~------~~-~~~~--~~~di~~~s~~K~l~g~~g~--G~l~~-~~~~~~~~~~~~~~~~~~~~~ 235 (401)
||++||+|+.|+-..+ ++ .... ...-+.+.|.+|+|+ .+|+ +.++. ++++..+...
T Consensus 190 h~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFN-laGL~~a~~Ii~n~~lr~~~~~----------- 257 (388)
T COG1168 190 HGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFN-LAGLKCAYIIISNRELRAKFLK----------- 257 (388)
T ss_pred cCCEEEeecccccccccCCCccchhhcChhhhcceEEEeecccccc-chhhhheeEEecCHHHHHHHHH-----------
Confidence 9999999999974322 11 1111 234578888999996 5453 55554 4444233321
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEc
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~ 313 (401)
++.... ...++.+++.+..+|.+.-.. +++...++...|.+++.+.|++. ++++..++ +.+++|+.+
T Consensus 258 ----~l~~~~--~~~~n~lg~~A~~aAY~~G~~-WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~----gTYL~WLD~ 326 (388)
T COG1168 258 ----RLKRNG--LHGPSALGIIATEAAYNQGEP-WLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQ----GTYLAWLDC 326 (388)
T ss_pred ----HHHHhc--CCCCchHHHHHHHHHHHhchH-HHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCC----Cceeeeeec
Confidence 111111 234888877777777764332 48899999999999999999984 88888764 446788877
Q ss_pred C-CCCCHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 314 P-SHINSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 314 ~-~~~~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. -+++.+++.+.|.++.+|.+.+|.. ....+.+|+++.+ +++-+++++++|+..++.+
T Consensus 327 r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac--pr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 327 RELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC--PRAILEEALERLKRALKKR 387 (388)
T ss_pred cccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC--CHHHHHHHHHHHHHHHhcc
Confidence 3 2567789999999988999999954 3334679999888 9999999999999888753
No 65
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-28 Score=232.43 Aligned_cols=311 Identities=14% Similarity=0.066 Sum_probs=227.9
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.++++.+++++......+..+. ....++|+.+++++|.+++ ++++++|+++++..++.+++++||+|++++|.|.
T Consensus 62 ~p~~~~~~v~~a~~~~~~~~~Yp~--~~~~~lr~~ia~~~~~~~~-~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~ 138 (380)
T PLN03026 62 NPYGPPPEVLEALGNMKFPYVYPD--PESRRLRAALAEDSGLESE-NILVGCGADELIDLLMRCVLDPGDKIIDCPPTFG 138 (380)
T ss_pred CCCCCCHHHHHHHHhhHhhccCCC--CCHHHHHHHHHHHhCcChh-hEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChH
Confidence 367788889998875321111122 2356899999999998764 4999999999999999888999999999999754
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
.+ ...++..|++++.++.+.++.+|++++++++.. ++++++++++|+||||.+.+.+++.++++. . ++||+|
T Consensus 139 ~y--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~---~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~--~-~~vi~D 210 (380)
T PLN03026 139 MY--VFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET---HKPKLLFLTSPNNPDGSIISDDDLLKILEL--P-ILVVLD 210 (380)
T ss_pred HH--HHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc---cCCcEEEEeCCCCCCCCCCCHHHHHHHHhc--C-CEEEEE
Confidence 33 355677899999999877778899999998842 467999999999999999999999999986 5 999999
Q ss_pred cccccCcce----eccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCC
Q 015729 176 GVSSICAID----FRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (401)
Q Consensus 176 ~a~~~~~~~----~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 250 (401)
++|...... .........+++.|.+|.++ .+.++|+++.++++++.+..... +++
T Consensus 211 eaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~--------------------~~~ 270 (380)
T PLN03026 211 EAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--------------------PYN 270 (380)
T ss_pred CcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcC--------------------CCC
Confidence 998633211 11122345788999999984 33446999999988777654321 122
Q ss_pred CcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh
Q 015729 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (401)
Q Consensus 251 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (401)
.+.....++.++++. ...+++.++++.+.++++.+.|++++ +.+.. ....++++.++.+.+..++.+.|.++
T Consensus 271 ~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-----~~~~f~~~~~~~~~~~~~~~~~l~~~ 343 (380)
T PLN03026 271 VSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYP-----SDANFILCRVTSGRDAKKLKEDLAKM 343 (380)
T ss_pred CCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECC-----CCCeEEEEECCCCCCHHHHHHHHHHC
Confidence 444444444445432 12256677888888999999998874 33322 12357778886566788999999855
Q ss_pred CCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 330 YNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 330 ~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
||.++++.....++++||++. +.++.+++++++++
T Consensus 344 -gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~ 378 (380)
T PLN03026 344 -GVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQ 378 (380)
T ss_pred -CeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHH
Confidence 999988754434568999754 67888999888865
No 66
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.3e-29 Score=237.43 Aligned_cols=320 Identities=13% Similarity=0.092 Sum_probs=227.7
Q ss_pred ChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCC
Q 015729 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 93 (401)
+++.+.+++.+.... ...+.......++++.+++++ |.. .++++++++|+++|+..++.+++++||+|++++++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~ 126 (391)
T PRK08361 47 TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPA 126 (391)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 456777777663221 112322344567888888876 432 33459999999999999998999999999999998
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
|++.. ..++..|++++.++++.+ +.+|++++++.+++ +++++++++|+||||.++| +++|.++|++ +
T Consensus 127 y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~--~ 198 (391)
T PRK08361 127 FVCYV--EDAKIAEAKPIRIPLREENEFQPDPDELLELITK----RTRMIVINYPNNPTGATLDKEVAKAIADIAED--Y 198 (391)
T ss_pred CcccH--HHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc----ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHH--c
Confidence 77653 567778999999998764 36899999998874 5689999999999999999 7788888999 9
Q ss_pred CcEEEEecccccCcce----eccC--cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 169 PALFLVDGVSSICAID----FRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~----~~~~--~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
++++|+|++++..... .... ....++++.|.+|.++ .+| +|++++++++.+.+.... .
T Consensus 199 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~GlRiG~~~~~~~~~~~~~~~~-------------~ 264 (391)
T PRK08361 199 NIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFA-MTGWRLGFVIAPEQVIKDMIKLH-------------A 264 (391)
T ss_pred CeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcC-CcHhhhhhhccCHHHHHHHHHHH-------------h
Confidence 9999999998643211 0111 1235788999999884 556 799999988877654211 0
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC-CC
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HI 317 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~ 317 (401)
+. .++.+.....++..+++.-.. ..+++.+++++++.+.+.+.|+++ |+.+..+ ..+.++|+.++. +.
T Consensus 265 ~~-----~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p----~g~~~~~~~l~~~~~ 335 (391)
T PRK08361 265 YI-----IGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP----KGAFYVFANIDETGM 335 (391)
T ss_pred hh-----ccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC----CEEEEEEEECCCCCC
Confidence 00 112333322233333321000 125677888888899999999887 7665544 234578888864 56
Q ss_pred CHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 318 NSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 318 ~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+..++.+.|.+++||.+.+|.. ...++++||++.. +++++++++++|++.+++
T Consensus 336 ~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 336 SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT--SKEKLIEAMERMEKALEE 390 (391)
T ss_pred CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence 7889999887667999999853 2235789998764 788999999999998864
No 67
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=1.6e-28 Score=232.45 Aligned_cols=320 Identities=15% Similarity=0.118 Sum_probs=229.8
Q ss_pred ccccCC--CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 11 HLFVPG--PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 11 ~~~~~~--p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
+.|+.+ |...++.+++++.+.......+.. ....++++.++++++.++ +++++++|+++++..++.+++++||+|+
T Consensus 35 i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~-~~i~~t~G~~~~l~~~~~~l~~~gd~vl 112 (367)
T PRK02731 35 IKLASNENPLGPSPKAIEAIRAAADELHRYPD-GSGFELKAALAEKFGVDP-ERIILGNGSDEILELLARAYLGPGDEVI 112 (367)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHhhcCCCC-CcHHHHHHHHHHHhCcCH-HHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence 444443 444567777777764322111111 123689999999999865 4499999999999988888889999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH 168 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~ 168 (401)
++++.|..+. ..++..|++++.++.+ ++.+|++.+++.+++ +++++++++++||||.+++.+++.++++.+.+
T Consensus 113 ~~~p~y~~~~--~~~~~~g~~~~~~~~~-~~~~~~~~l~~~~~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 185 (367)
T PRK02731 113 YSEHGFAVYP--IAAQAVGAKPVEVPAK-DYGHDLDAMLAAVTP----RTRLVFIANPNNPTGTYLPAEEVERFLAGVPP 185 (367)
T ss_pred EecCCHHHHH--HHHHHcCCeEEEeccc-CCCCCHHHHHHHhCC----CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCC
Confidence 9999765433 4467789999999874 456899999998863 56999999999999999999999999988435
Q ss_pred CcEEEEecccccCcce------eccC-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 169 PALFLVDGVSSICAID------FRMD-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~------~~~~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
|+++|+|++|...... .+.. .....+++.|.+|.++ ++.++|++++++++.+.+.....
T Consensus 186 ~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~------------- 252 (367)
T PRK02731 186 DVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQ------------- 252 (367)
T ss_pred CcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccC-------------
Confidence 9999999998643210 1111 1134577889999874 23456999999988777654311
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINS 319 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (401)
+++.+.. ++.++.+.+... .+++.+++++++.+.+.+.|++.|+.+..+ .+.++++.++++.++
T Consensus 253 -------~~~~~~~---~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~g~~~~i~~~~~~~~ 317 (367)
T PRK02731 253 -------PFNVNSL---ALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELGLEYIPS-----VGNFILVDFDDGKDA 317 (367)
T ss_pred -------CCCCCHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-----CceEEEEECCCCCCH
Confidence 1112333 333344443322 256778888888899999998887765431 245788888766788
Q ss_pred HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 320 SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 320 ~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.++++.|.++ ||.++++......+++|+++. +.+|+++++++|+++++
T Consensus 318 ~~~~~~L~~~-gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 318 AEAYQALLKR-GVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHC-CEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 8999999865 999998854323568999864 68899999999998764
No 68
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=6.7e-29 Score=233.86 Aligned_cols=313 Identities=13% Similarity=0.107 Sum_probs=225.6
Q ss_pred CcCChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 17 PVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
|.+.++.+.+++.+.... ...+. .....++|+.++++++.+++ ++++|+|+++++..++.+++++||+|++++|+|+
T Consensus 35 ~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~~lr~aia~~~~~~~~-~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~ 112 (353)
T PRK05387 35 PYPPSPKVLEAIRAALGDDLRLYP-DPNADALRQAIAAYYGLDPE-QVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYS 112 (353)
T ss_pred CCCCCHHHHHHHHHHhhhhhhcCC-CCcHHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHH
Confidence 445577888888764332 11222 12347999999999998664 4999999999999999999999999999999764
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
.+ ...++..|++++.++.+.++.+|++++++ ..+++++++|+||||.+++.+++.++++.+ +++++|+|
T Consensus 113 ~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~--------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~-~~~~livD 181 (353)
T PRK05387 113 FY--PVYAGLYGIPYEEIPLDDDFSIDVEDYLR--------PNGGIIFPNPNAPTGIALPLAEIERILAAN-PDSVVVID 181 (353)
T ss_pred HH--HHHHHHcCCEEEEeecCCCCCCCHHHHHh--------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhC-CCcEEEEe
Confidence 43 35577889999999998778899998863 136889999999999999999999999883 29999999
Q ss_pred cccccCcc-e-ec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 176 GVSSICAI-D-FR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 176 ~a~~~~~~-~-~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
++|..... . .. .+....++++.|.+|.++ .+.++|+++.++++.+.+..... .+..++.
T Consensus 182 e~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~-----------------~~~~~~~ 244 (353)
T PRK05387 182 EAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKN-----------------SFNSYPL 244 (353)
T ss_pred CcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhc-----------------cCCCCCc
Confidence 99853211 0 01 112245789999999884 23357999999988777654311 0001234
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCC
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYN 331 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 331 (401)
+.....++.++++. .+.+++.++++.++++.+.+.|++.|+++... ...++++.++ +.+..++++.|.++ |
T Consensus 245 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~~~~~~~~~~-~~~~~~~~~~l~~~-g 315 (353)
T PRK05387 245 DRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPS-----KANFVFARHP-SHDAAELAAKLRER-G 315 (353)
T ss_pred CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC-----cCcEEEEECC-CCCHHHHHHHHHHC-C
Confidence 44444444444431 22356778888889999999998888765321 2346778775 45788999999765 9
Q ss_pred eEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 332 LSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 332 i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
|.++....+...+++||++. +++++++++++|+++++
T Consensus 316 i~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 316 IIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 99875433323568999864 67999999999998764
No 69
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.97 E-value=9.9e-29 Score=238.34 Aligned_cols=315 Identities=15% Similarity=0.074 Sum_probs=225.2
Q ss_pred HHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcC--CCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHH
Q 015729 22 DQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLW 99 (401)
Q Consensus 22 ~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~ 99 (401)
+.+.+++.+.......+.......++++.++++++. ..++++++++|+++|+..++.++++|||.|++++|+|+.+.
T Consensus 101 p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~- 179 (431)
T PRK15481 101 PDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSI- 179 (431)
T ss_pred HHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHH-
Confidence 456666665332222233334456789999998874 23446999999999999999999999999999999876653
Q ss_pred HHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEE-ecCCCcccccchH---HHHHHhhhcCC-CcEEEE
Q 015729 100 IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIV-HNETATGVTNNLS---KVRKLLDEYRH-PALFLV 174 (401)
Q Consensus 100 ~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~-~~~n~tG~~~~l~---~i~~l~~~~~~-~~~li~ 174 (401)
..++..|++++.++++.++ +|++++++++++ ++++++++ +|+||||.+++.+ +|.++|++ + +++||+
T Consensus 180 -~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~~----~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~--~~~~~ii~ 251 (431)
T PRK15481 180 -NMLRYAGFSASPVSVDAEG-MQPEKLERALAQ----GARAVILTPRAHNPTGCSLSARRAAALRNLLAR--YPQVLVII 251 (431)
T ss_pred -HHHHHcCCeEEeeccCCCC-CCHHHHHHHHhc----CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHh--cCCceEEe
Confidence 6678899999999987654 899999999874 46888887 9999999999875 88999998 7 999999
Q ss_pred ecccccCcce--ec-c-CcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCC
Q 015729 175 DGVSSICAID--FR-M-DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (401)
Q Consensus 175 D~a~~~~~~~--~~-~-~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 250 (401)
|++|...... .. . ......+++.|.+|.++.+.++|+++.++++.+.+..... .. ...
T Consensus 252 De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~~~~~~~~~~~---------------~~---~~~ 313 (431)
T PRK15481 252 DDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSATSARLRLRLN---------------SG---TQW 313 (431)
T ss_pred cCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCHHHHHHHHHHHh---------------cc---ccC
Confidence 9998643210 01 1 1123468899999999744567999999988776642110 01 112
Q ss_pred CcHHHHHHHHHHHHHHH-HhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh
Q 015729 251 PSIQLLYGLRAALDLIF-EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (401)
Q Consensus 251 ~~~~~~~a~~~al~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (401)
.+.....++..+++.-. ...+++.++.++++++.+.+.|++.|+.+..+ ..+.++|+.+|+ +..++.+.|.++
T Consensus 314 ~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p----~gg~f~~~~l~~--~~~~~~~~l~~~ 387 (431)
T PRK15481 314 VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSP----GDGLNLWLPLDT--DSQATALTLAKS 387 (431)
T ss_pred CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC----CCeEEEEEECCC--CHHHHHHHHHHC
Confidence 33433333333433100 11145678888899999999998887765333 345788888864 467888888765
Q ss_pred CCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 330 YNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 330 ~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
||.+.+|.... .++++||++.. .+++++++++++|+++++
T Consensus 388 -gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 388 -GWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN 430 (431)
T ss_pred -CcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence 99999985421 23579997654 779999999999998874
No 70
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.9e-28 Score=233.76 Aligned_cols=315 Identities=14% Similarity=0.074 Sum_probs=218.0
Q ss_pred hHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 21 PDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 21 ~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
++.+++++.+... ....+.......++|+.+++++ |.+ +++.+++|+|+++|+..++.+++++||+|++++|
T Consensus 50 p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P 129 (394)
T PRK05942 50 PQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSP 129 (394)
T ss_pred CHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCC
Confidence 4445555443221 1122333344567888888877 432 3334888999999999999899999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|+.+. ..+...|++++.++.+.+ +.+|++++++.++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 130 ~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~-- 201 (394)
T PRK05942 130 AYPAHF--RGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA----QQAKILYFNYPSNPTTATAPREFFEEIVAFARK-- 201 (394)
T ss_pred CCcchH--HHHHHcCCEEEEeecCCccCCccCHHHHHHhcc----ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHH--
Confidence 877654 345678999999998743 4689999999886 36799999999999999998 6678888998
Q ss_pred CCcEEEEecccccCcc------e-eccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 168 HPALFLVDGVSSICAI------D-FRMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~------~-~~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|++||+|++|..... + .+... ....+++.|.+|.++ .+.++|+++.++++.+.+.....
T Consensus 202 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~----------- 270 (394)
T PRK05942 202 YEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKT----------- 270 (394)
T ss_pred cCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHh-----------
Confidence 9999999999864321 0 11111 234577889999883 23347999999998877754211
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
. ...+.+.....++..+++.. +..+++.++++.++.+.+.+.|++.|+.+..+ ..+.++|+.+|.+.+
T Consensus 271 -----~--~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~----~~~~f~~~~~~~~~~ 338 (394)
T PRK05942 271 -----N--LDYGIFSALQKAAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT----KATMYLWVPCPVGMG 338 (394)
T ss_pred -----h--cccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC----CeeeEEEEECCCCCC
Confidence 0 01123333334445555432 22356778888888999999998877765543 345688899877677
Q ss_pred HHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
..++...+.+++||.+.+|... ...+++||++.. +.+.+.+++++|.+
T Consensus 339 ~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~ 388 (394)
T PRK05942 339 STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA--DCDRLGEALDRLKQ 388 (394)
T ss_pred HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 7788877766679999988432 235789998753 45566666666543
No 71
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.1e-28 Score=233.86 Aligned_cols=320 Identities=17% Similarity=0.132 Sum_probs=227.5
Q ss_pred ChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCC
Q 015729 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 93 (401)
.++.+.+++.+.... ...+.......++|+.+++++ |.. .++++++++|+++|+..++.+++++||+|++++++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~ 124 (393)
T PRK05764 45 TPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPY 124 (393)
T ss_pred CCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCC
Confidence 356676766653321 112322334567888888877 321 23459999999999999998889999999999998
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
|+.+ ...++..|++++.++.+.+ +.+|++++++++++ +++++++++|+||||.+++ +++|.++|++ +
T Consensus 125 y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~--~ 196 (393)
T PRK05764 125 WVSY--PEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP----KTKALILNSPSNPTGAVYSPEELEAIADVAVE--H 196 (393)
T ss_pred Ccch--HHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc----cceEEEEECCCCCCCcccCHHHHHHHHHHHHH--C
Confidence 7754 3567788999999998743 46789999998863 5689999999999999986 6678888999 9
Q ss_pred CcEEEEecccccCcce------e-c--cCcccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 169 PALFLVDGVSSICAID------F-R--MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~------~-~--~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
|+++|+|++|+..... . . .+..+.++++.|.+|.++ .+| +|+++.++++.+.+.....
T Consensus 197 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~i~~~~~~~~~~~~~~~---------- 265 (393)
T PRK05764 197 DIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYA-MTGWRLGYAAGPKELIKAMSKLQS---------- 265 (393)
T ss_pred CcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCccccc-CccceeEEEecCHHHHHHHHHHHh----------
Confidence 9999999998643210 0 1 122356889999999984 444 7999999988776653210
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
.+...++.....++..+++. ....+++.++++.++.+.+.+.|++. |+++..+ ..+.++++.++..
T Consensus 266 --------~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----~g~~~~~~~~~~~ 332 (393)
T PRK05764 266 --------HSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP----EGAFYVFPNVSKL 332 (393)
T ss_pred --------hcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC----CcceEEEEecccc
Confidence 01112344333344444431 12235667788888899999999987 8776553 2445677777643
Q ss_pred C-----CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 I-----NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~-----~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. ++.++...|.+++||.+.+|.....++++||++.. +++++++++++|++++++.
T Consensus 333 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~--~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 333 LGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT--SLEDLEEGLERIERFLESL 392 (393)
T ss_pred cccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 3 24788888876679999998554446899998764 7999999999999988753
No 72
>PRK08912 hypothetical protein; Provisional
Probab=99.97 E-value=2.2e-28 Score=233.00 Aligned_cols=319 Identities=16% Similarity=0.128 Sum_probs=224.2
Q ss_pred ChHHHHHHHccCcC-CCCCccHHHHHHHHHHHHHHHh----cCC-CCc-eEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 20 IPDQVIRAMNRNNE-DYRSPAVPALTKTLLEDIKKIF----KTT-SGT-PFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 20 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g~~-~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
.++.+++++.+... ....+.......++|+.+++++ |.+ .++ ++++|+|+++|+..++.+++++||+|+++.|
T Consensus 40 ~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p 119 (387)
T PRK08912 40 GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQP 119 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCC
Confidence 35566666655321 1122332334456777777665 432 233 6999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
.|+.+. ..++..|++++.++++. ++.+|++++++.+.. +++++++++|+||||.+++ +++|.++|++ +
T Consensus 120 ~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~--~ 191 (387)
T PRK08912 120 LYDAYL--PLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP----RTKAVLLNNPLNPAGKVFPREELALLAEFCQR--H 191 (387)
T ss_pred CchhhH--HHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc----cceEEEEeCCCCCcCcccCHHHHHHHHHHHHH--C
Confidence 876543 56788899999999864 467899999998863 5689999999999999997 5568888898 9
Q ss_pred CcEEEEecccccCcc------e-eccCc-ccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 169 PALFLVDGVSSICAI------D-FRMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 169 ~~~li~D~a~~~~~~------~-~~~~~-~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+++||+|++|..... + ..... .+.++++.|.+|.++ .+| +|+++++++..+.+.....
T Consensus 192 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~~~~~l~~~~~----------- 259 (387)
T PRK08912 192 DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFS-LTGWKVGFVCAAPPLLRVLAKAHQ----------- 259 (387)
T ss_pred CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhcc-CcCceeEEEecCHHHHHHHHHHHh-----------
Confidence 999999999853221 1 11111 246799999999884 444 7999999998776643210
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC---
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--- 315 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--- 315 (401)
...++.+.....++..++... ...+++.++++.++++.+.+.|++.|+++..+ ..+.++|+.+|.
T Consensus 260 -------~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 260 -------FLTFTTPPNLQAAVAYGLGKP-DDYFEGMRADLARSRDRLAAGLRRIGFPVLPS----QGTYFLTVDLAPLGL 327 (387)
T ss_pred -------hccccCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----CcceEEEecccccCC
Confidence 001112222223333333211 12256678888999999999999888776543 245678888864
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCC----CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 316 HINSSEIVRRAWQRYNLSLGLGLNK----VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 316 ~~~~~~l~~~L~~~~~i~v~~g~~~----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
..+..++++.|.++.||.+.+|... ...+++|+++.. +++++++++++|++.+++
T Consensus 328 ~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 328 AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAARRR 386 (387)
T ss_pred CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 2467789999876669999998432 124789998775 689999999999988753
No 73
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-28 Score=231.22 Aligned_cols=311 Identities=14% Similarity=0.152 Sum_probs=229.2
Q ss_pred CCcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCC
Q 015729 16 GPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 93 (401)
.|.++++.+++++.+.... ...+.. ....++++.++++++.+.++++++++|+++++..++.+++++||+|++++|+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~ 114 (356)
T PRK04870 36 NPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPG 114 (356)
T ss_pred CCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 3567889999998875422 222222 2457999999999998754459999999999999988889999999999997
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEE
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li 173 (401)
|+.+ ...++..|++++.+++++++.+|++++++.+.+ ++++++++++|+||||.+++.+++.++++. .++++|
T Consensus 115 y~~~--~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~--~~~~ii 187 (356)
T PRK04870 115 FVMY--RMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE---HRPALVFLAYPNNPTGNLFDDADVERIIEA--APGLVV 187 (356)
T ss_pred HHHH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCCEEEEcCCCCCCCCCCCHHHHHHHHHH--CCCEEE
Confidence 6654 466888999999999987778999999999864 357999999999999999999999999988 588999
Q ss_pred EecccccCcc-e--eccCcccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 174 VDGVSSICAI-D--FRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 174 ~D~a~~~~~~-~--~~~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
+|+++..... . .........+++.|.+| + +.+| +|+++++++.++++..... .
T Consensus 188 ~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~-~~~GlRiG~~i~~~~~i~~~~~~~~--------------------~ 245 (356)
T PRK04870 188 VDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-L-GLAGLRLGYLAGHPAWIAELDKVRP--------------------P 245 (356)
T ss_pred EECCchhhcCcchHHHHhhCCCEEEEecchh-h-hhHHHhhhhhhCCHHHHHHHHHccC--------------------C
Confidence 9999863321 0 01122234688999999 5 3444 7999999988877654321 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHH
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (401)
++.+....+++..+++.. ..+++.+++++++++.+.+.|+++ |+.+... .+.++++.++ +..++.+.|.
T Consensus 246 ~~~~~~~q~~a~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~l~ 315 (356)
T PRK04870 246 YNVNVLTQATALFALEHV--DVLDAQAAQLRAERTRLAAALAALPGVTVFPS-----AANFILVRVP---DAAAVFDGLK 315 (356)
T ss_pred CcCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC-----CCeEEEEECC---CHHHHHHHHH
Confidence 123333333334444321 125677888889999999999887 7654321 2347888885 4678888886
Q ss_pred hhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 328 QRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 328 ~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++ ||.++++... ..++++||++. +.++.++++++|++++
T Consensus 316 ~~-gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 316 TR-GVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred HC-CEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 55 9999987432 23578999765 6889999999998753
No 74
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.97 E-value=2e-28 Score=229.92 Aligned_cols=314 Identities=16% Similarity=0.050 Sum_probs=221.2
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhccCCCC---CeEEE
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPG---DRIIS 89 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~~~~g---d~vl~ 89 (401)
+.++.+.+++.+.......|.......++|+.+++++ |.+ +++++++|+|+++|+..++.+++++| |+|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~ 92 (350)
T TIGR03537 13 PTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIF 92 (350)
T ss_pred CCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEE
Confidence 3366777887764322222322233457777777765 543 33269999999999999988888887 69999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhh
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLD 164 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~ 164 (401)
+.|+|+.+. ..++..|++++.++.+. ++.+|++++++++.+ +++++++++|+||||.+++ +++|.++|+
T Consensus 93 ~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~ 166 (350)
T TIGR03537 93 GTPGYPVYE--RGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE----ETKIVWINYPHNPTGATAPRSYLKETIAMCR 166 (350)
T ss_pred cCCCCcchH--HHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh----ccEEEEEeCCCCCcCcccCHHHHHHHHHHHH
Confidence 999877654 55788999999999864 345799999998874 5699999999999999998 777888898
Q ss_pred hcCCCcEEEEecccccCcc---eeccC--cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 165 EYRHPALFLVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
+ +|++||+|+++..... +.... .....+++.|.+|.++ .+| +|+++.++++.+.+.....
T Consensus 167 ~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~---------- 233 (350)
T TIGR03537 167 E--HGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSG-MTGYRSGFVAGDEKLISFLRKLRA---------- 233 (350)
T ss_pred H--cCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccC-CccccceeeecCHHHHHHHHHHHH----------
Confidence 8 9999999999864321 11111 1234588889999883 444 7999988887766653210
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (401)
.+ ..+++.....++.+++. .....++.+++++++.+.+.+.|.+.|+++..+ ..+.++++++|+..
T Consensus 234 --~~------~~~~~~~~q~~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~----~g~~~~~~~~~~~~ 299 (350)
T TIGR03537 234 --NF------GVASPDFVQAAAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP----DATFYLWVKVPSGI 299 (350)
T ss_pred --hh------ccCCCHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CeEEEEEEECCCCC
Confidence 00 11233222233333332 122356677888888888999998888765543 24557888888767
Q ss_pred CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 318 NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 318 ~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
++.++++.|.++ ||.+.+|... ...+++|+++. .++++++++++++++
T Consensus 300 ~~~~l~~~L~~~-gv~v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 300 DAKDYALRLLEN-GIVVAPGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred CHHHHHHHHHHC-CEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 788999999875 9999998532 22578999875 478999999988864
No 75
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=4.5e-28 Score=232.21 Aligned_cols=333 Identities=17% Similarity=0.137 Sum_probs=234.4
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCCC--------C---CccHHHHHHH-HHHHHHHHhcCCCCceEEecCChhHHHHH
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDY--------R---SPAVPALTKT-LLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~--------~---~~~~~~~~~~-l~~~la~~~g~~~~~~i~~~~g~t~a~~~ 75 (401)
.++.++.|+|..+++.|++++....... + +....+.+++ .++.+++++|.+.. .++++||++|+..
T Consensus 19 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--~v~~~sgt~a~~~ 96 (402)
T cd00378 19 RETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--NVQPHSGSQANLA 96 (402)
T ss_pred HhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--eeecCCcHHHHHH
Confidence 4688999999999999999998753211 1 1112233333 56678899998753 2344467899999
Q ss_pred HHhccCCCCCeEEEEcCCcchHHHH---HHHHHcCCcEEEEeCCC---CCCCChHHHHHHHhccCCCCceEEEEEecCCC
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLLWI---DQQQRLNFNVDVVESDW---GEGAKLDVLASKLAADTAHTIKAICIVHNETA 149 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~---~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~ 149 (401)
++.+++++||+|+++.+.|.++... ..++..|++++.++.+. ++.+|++++++.+.. +++++++++++++
T Consensus 97 ~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~---~~~~~v~~~~~~~- 172 (402)
T cd00378 97 VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE---FKPKLIVAGASAY- 172 (402)
T ss_pred HHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh---CCCCEEEecCccc-
Confidence 9999999999999999987665321 12455687777776643 468999999999864 3578888887765
Q ss_pred cccccchHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecH-HHHHHhc
Q 015729 150 TGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASP-KALEASK 223 (401)
Q Consensus 150 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~-~~~~~~~ 223 (401)
|...|+++|.++|++ +|+++|+|++|..+.. +.... ++|++++|+||++.|+.| |+++.++ ++.+++.
T Consensus 173 -~~~~~~~~I~~l~~~--~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~ 246 (402)
T cd00378 173 -PRPIDFKRFREIADE--VGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPRG-GLILTRKGELAKKIN 246 (402)
T ss_pred -CCCcCHHHHHHHHHh--cCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCCc-eEEEeccHHHHHHHH
Confidence 467799999999999 9999999999865432 22222 579999999999966665 7776665 7766664
Q ss_pred cCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcc
Q 015729 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEW 303 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 303 (401)
..... +..+++....++++..++......++++.++++.++++++++.|.+.|+.+....
T Consensus 247 ~~~~~-----------------~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--- 306 (402)
T cd00378 247 SAVFP-----------------GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGG--- 306 (402)
T ss_pred HHhCc-----------------cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecC---
Confidence 32110 1122344445555566666554434577888899999999999999888775321
Q ss_pred CCceeEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCC------CCcEEEEeeccc----CCHHHHHHHHHHHHHHHHh
Q 015729 304 FSDTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKV------AGKVFRIGHLGH----LNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 304 ~~~~~~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~------~~~~~Ri~~~~~----~~~~di~~~~~~i~~~l~~ 372 (401)
....++++.+++ +.+...+.+.|. +.||.+.+...+. ....+|+++... ++++|++++++.|++++++
T Consensus 307 ~~~~~v~v~~~~~~~~~~~~~~~l~-~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 307 TDNHLVLVDLRPKGITGKAAEDALE-EAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCCeEEEEeCCccCCCHHHHHHHHH-HcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 234677888853 345566666665 5599997653321 335799987663 4699999999999998875
Q ss_pred c
Q 015729 373 V 373 (401)
Q Consensus 373 ~ 373 (401)
-
T Consensus 386 ~ 386 (402)
T cd00378 386 A 386 (402)
T ss_pred c
Confidence 3
No 76
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=4e-29 Score=234.77 Aligned_cols=282 Identities=16% Similarity=0.102 Sum_probs=215.0
Q ss_pred ccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCC------------CC--CeEEEEcCCcchHHHHHH
Q 015729 38 PAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLS------------PG--DRIISFLIGQFSLLWIDQ 102 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~------------~g--d~vl~~~~~~~~~~~~~~ 102 (401)
+...+..+++++.+++++|.+ .+..+++|+|+|+|+..++.+... ++ +.|+++.++|++.. ..
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~--~~ 111 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE--KA 111 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH--HH
Confidence 345566778888889999986 444589999999999988866421 23 36677777777643 45
Q ss_pred HHHcCCcEEEEeCCCCCCCChHHHHHHHhcc--CCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccccc
Q 015729 103 QQRLNFNVDVVESDWGEGAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI 180 (401)
Q Consensus 103 ~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~--~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~ 180 (401)
++..|++++.+++++++.+|++++++++++. .+.+++++++++++|++|.+.|+++|.++|++ +|+++|+|++|+.
T Consensus 112 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~--~~~~l~vD~a~~~ 189 (345)
T cd06450 112 AAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEK--YDLWLHVDAAYGG 189 (345)
T ss_pred HHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHH--hCCeEEEechhhH
Confidence 5667999999999887789999999999751 11256888999999999999999999999999 9999999999988
Q ss_pred CcceeccCc------ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHH
Q 015729 181 CAIDFRMDE------WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (401)
Q Consensus 181 ~~~~~~~~~------~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 254 (401)
+..+.+... .++|++.+|+||++++|.|+|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~--------------------------------------- 230 (345)
T cd06450 190 FLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR--------------------------------------- 230 (345)
T ss_pred HHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH---------------------------------------
Confidence 765443221 36899999999999888888988765
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC----CCCHHHHHHHHHhh
Q 015729 255 LLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS----HINSSEIVRRAWQR 329 (401)
Q Consensus 255 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~ 329 (401)
++++.++++.+...++++..++..++++++.+.|.++ ++.+..+. .. .++.|.++. +.+..++.+.|.++
T Consensus 231 -~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~-~iv~f~~~~~~~~~~~~~~i~~~L~~~ 305 (345)
T cd06450 231 -ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP---NL-SLVCFRLKPSVKLDELNYDLSDRLNER 305 (345)
T ss_pred -HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---ce-eEEEEEECCcchhhHHHHHHHHHHHhc
Confidence 1355677777777788999999999999999999987 77665421 23 356666654 24567899999866
Q ss_pred CCeEEccCCCCCCCcEEEEeecccC-CHHHHHHHHHHHHH
Q 015729 330 YNLSLGLGLNKVAGKVFRIGHLGHL-NELQLLGCLAGVEM 368 (401)
Q Consensus 330 ~~i~v~~g~~~~~~~~~Ri~~~~~~-~~~di~~~~~~i~~ 368 (401)
|+.+.++.....+.++|+++...+ |++|+|+++++|++
T Consensus 306 -g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 306 -GGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -CCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 544444322123567999998764 99999999999875
No 77
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.97 E-value=6.9e-28 Score=228.66 Aligned_cols=336 Identities=10% Similarity=0.031 Sum_probs=241.9
Q ss_pred CcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCC-ceEE--ecCChhHHHHHHHhccC-------
Q 015729 17 PVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG-TPFL--IPTTGTGAWESALTNTL------- 81 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-~~i~--~~~g~t~a~~~~~~~~~------- 81 (401)
++++.+++.+++...... ...+...+..+++++.+++++|.+++ +++. +|+|||+|+..++.+..
T Consensus 50 tt~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 777787787777664321 12233447788999999999999732 2244 48999999998874421
Q ss_pred -CC-----CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 82 -SP-----GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 82 -~~-----gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
.. ...|+++..+|++.. +.++..|++++.++++.+ +.+|+++|+++++++ +.+|++++++|.+|.+.
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~sv~--ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~----t~lV~~t~g~t~tG~id 203 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVCWE--KFARYFDVELREVPMDPGRYVIDPEQVVEAVDEN----TIGVVCILGTTYTGEYE 203 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHHHH--HHHHHcCceeEEEecCCCceeeCHHHHHHHHhhC----CeEEEEEeCCCCCcccC
Confidence 11 136888888888764 667778999999999875 489999999999854 58999999999999999
Q ss_pred chHHHHHHhhhcCC------CcEEEEecccccCc-------ceeccCcccceEEEecCCCcccCCCcceEEEecHHH-H-
Q 015729 155 NLSKVRKLLDEYRH------PALFLVDGVSSICA-------IDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKA-L- 219 (401)
Q Consensus 155 ~l~~i~~l~~~~~~------~~~li~D~a~~~~~-------~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~-~- 219 (401)
|+++|.++|++ + |+++++|++++.+. .++++...++|.+++|+||++.+|.|+|+++++++. .
T Consensus 204 pi~~I~~i~~~--~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~ 281 (431)
T TIGR01788 204 DVKALNDALDE--YNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALP 281 (431)
T ss_pred CHHHHHHHHHH--HHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcc
Confidence 99999999999 7 89999999999544 344555567899999999998789999999988752 1
Q ss_pred HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCcccc
Q 015729 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT 298 (401)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 298 (401)
+.+... ..|.... . ......++.+...+++.+..+..+...|++++.++..++++++.+.|++. ++++..
T Consensus 282 ~~~~~~---~~yl~~~-----~-~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~ 352 (431)
T TIGR01788 282 EELIFH---VNYLGGD-----E-PTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIIS 352 (431)
T ss_pred hhheec---ccccCCC-----C-CCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee
Confidence 222111 0011000 0 00011122333344566777777777889999999999999999999998 688775
Q ss_pred CCCccCCceeEEEEcCC----CCCHHHHHHHHHhhCCeEEccCCCC--CCCc-EEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 299 QKEEWFSDTVTAVIVPS----HINSSEIVRRAWQRYNLSLGLGLNK--VAGK-VFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~-~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.+ .. .+++|.++. +.+..++.+.|.++ |+.+.....+ ..+. .+|+++...++++.++++++.|++++.
T Consensus 353 ~~~--~~-~iV~Fr~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~ 428 (431)
T TIGR01788 353 DGS--GI-PLVAFKLKDDADPGYTLYDLSHRLRER-GWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALA 428 (431)
T ss_pred CCC--Cc-eEEEEEeCCCCCCCcCHHHHHHHHHHC-CCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 421 23 577788742 35677899999765 8765333221 2233 489998888999999999999999887
Q ss_pred hc
Q 015729 372 DV 373 (401)
Q Consensus 372 ~~ 373 (401)
++
T Consensus 429 ~~ 430 (431)
T TIGR01788 429 YL 430 (431)
T ss_pred hh
Confidence 64
No 78
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.4e-28 Score=232.04 Aligned_cols=311 Identities=14% Similarity=0.097 Sum_probs=225.8
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
|...++.+.+++.+..... .+.+.....++++.++++++.++ +++++++|+++++..++.+++++||+|++++|+|+.
T Consensus 40 ~~~~~~~v~~a~~~~~~~~-~~~p~~g~~~lr~~ia~~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~ 117 (359)
T PRK03158 40 PYGPSPKVKEAIAAHLDEL-ALYPDGYAPELRTKVAKHLGVDE-EQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQ 117 (359)
T ss_pred CCCCCHHHHHHHHHHHHHh-hcCCCCcHHHHHHHHHHHhCCCH-HHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHH
Confidence 4446777888877643221 12222456789999999999865 459999999999998888889999999999998765
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
+. ..+...|++++.++++ ++.+|++++++.++ ++++++++++|+||||.+++.+++.++++..++|++||+|+
T Consensus 118 ~~--~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~----~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De 190 (359)
T PRK03158 118 YR--HNAIIEGAEVREVPLK-DGGHDLEAMLKAID----EQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDE 190 (359)
T ss_pred HH--HHHHHcCCeEEEEecC-CCCcCHHHHHHhcC----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 43 4567789999999987 56789999998876 35689999999999999999999999998855699999999
Q ss_pred ccccCcce----e---ccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 177 VSSICAID----F---RMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 177 a~~~~~~~----~---~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
+|...... . ..+.....+++.|.+|.++ .+.++|++++++++.+.+..... .
T Consensus 191 ~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~--------------------~ 250 (359)
T PRK03158 191 AYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARP--------------------P 250 (359)
T ss_pred chHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcC--------------------C
Confidence 98643211 0 0112345788899999984 23346999999998877654211 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHh
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (401)
+..+.....++.++++. ...+++.++.++++++.+.+.|.+.|+.+..+ .+.++++.++ .+..++.+.|.+
T Consensus 251 ~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~g~~i~~~~~--~~~~~~~~~l~~ 321 (359)
T PRK03158 251 FNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS-----QTNFIFVDTG--RDANELFEALLK 321 (359)
T ss_pred CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC-----cCcEEEEECC--CCHHHHHHHHHH
Confidence 12444444444444431 11245566667778888888888777665432 2346777763 367889999986
Q ss_pred hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 329 ~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+ ||.+.+|.....++++||++. +.+|.++++++|+++
T Consensus 322 ~-gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 322 K-GYIVRSGAALGFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred C-CeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 5 999999854434678999754 799999999999875
No 79
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=2.4e-28 Score=235.98 Aligned_cols=339 Identities=14% Similarity=0.063 Sum_probs=244.2
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCC-----------CccHHHHHH-HHHHHHHHHhcCCCCceEEec---CChhHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR-----------SPAVPALTK-TLLEDIKKIFKTTSGTPFLIP---TTGTGAW 73 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~~~~~~~~~-~l~~~la~~~g~~~~~~i~~~---~g~t~a~ 73 (401)
++.+++|+--.+++.|++++.......+ +....+.++ ..++.+++++|.++.+ +.++ +||++|+
T Consensus 35 ~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~-~~~~~~~~sgt~an 113 (452)
T PTZ00094 35 EGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEE-WGVNVQPYSGSPAN 113 (452)
T ss_pred cCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCccc-ceeecCCCchHHHH
Confidence 5778888888999999999988543221 122234444 4788999999997654 5455 7899999
Q ss_pred HHHHhccCCCCCeEEEEcCCcchHHHHH--HHH------HcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEe
Q 015729 74 ESALTNTLSPGDRIISFLIGQFSLLWID--QQQ------RLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH 145 (401)
Q Consensus 74 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~--~~~------~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~ 145 (401)
..++.+++++||+|++...+|.++.... ..+ ..+.++..++.+.++.+|++++++.+++ .+++++++.
T Consensus 114 ~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~---~~~~lvi~~- 189 (452)
T PTZ00094 114 FAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKA---FRPKLIIAG- 189 (452)
T ss_pred HHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHH---hCCCEEEEe-
Confidence 9999999999999999888777664211 100 1113344455666688999999999964 245666654
Q ss_pred cCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccC---cccceEEEecCCCcccCCCcceEEEecHHHHHHh
Q 015729 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD---EWGIDVALTGSQKALSLPTGMGIVCASPKALEAS 222 (401)
Q Consensus 146 ~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~ 222 (401)
++.+|...|+++|.++|++ +|+++++|++|++|..+.+.. ..++|++++|+||||.||.| |+++++++..+.+
T Consensus 190 -~s~~g~~~di~~I~~i~~~--~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~~l 265 (452)
T PTZ00094 190 -ASAYPRDIDYKRFREICDS--VGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKKVKPDI 265 (452)
T ss_pred -CCCCCCccCHHHHHHHHHH--cCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEecccchHH
Confidence 3469999999999999999 999999999999998755432 12699999999999988887 8888877654433
Q ss_pred ccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCc
Q 015729 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEE 302 (401)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 302 (401)
........+ +.+.++++...++++.++++.+...+++...++..++++++.+.|.+.|+++..+...
T Consensus 266 ~~~~~~~~~-------------p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~ 332 (452)
T PTZ00094 266 ENKINEAVF-------------PGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTD 332 (452)
T ss_pred HHhhccccC-------------CCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCC
Confidence 221110000 1123458888899999999998777778899999999999999998888887653221
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEc-cCCCC----CCCcEEEEeecccCC----HHHHHHHHHHHHHHHHh
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG-LGLNK----VAGKVFRIGHLGHLN----ELQLLGCLAGVEMILKD 372 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~-~g~~~----~~~~~~Ri~~~~~~~----~~di~~~~~~i~~~l~~ 372 (401)
....++.+.. .+.+..++...|. +.||.+. .+..+ ..++.+|+|++.+++ ++|++++++.|+++++.
T Consensus 333 -~~~~~v~~~~-~~~~~~~~~~~L~-~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 333 -NHLVLVDLRP-FGITGSKMEKLLD-AVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred -CceEeecCCc-CCCCHHHHHHHHH-HCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 1112223333 4567778888885 4599984 33221 224689999977666 99999999999998874
No 80
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.97 E-value=5.2e-28 Score=232.23 Aligned_cols=330 Identities=12% Similarity=0.047 Sum_probs=228.2
Q ss_pred cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.+.++++.+++.+.... ...+.......++|+.++++++.. .++++++|+|+++|+..++.+++++||+|+++
T Consensus 68 ~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~ 147 (430)
T PLN00145 68 FRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLP 147 (430)
T ss_pred CCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 46667788877764322 223333456778999999888542 33569999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
.|+|+.+. ..+...|++++.+++.. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 148 ~P~y~~y~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~ 221 (430)
T PLN00145 148 RPGYPLYE--ARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE----NTVAMVIINPNNPCGSVYSYEHLAKIAETARK 221 (430)
T ss_pred CCCCccHH--HHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc----CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99877654 45677899999988643 467899999998874 5699999999999999998 6678888998
Q ss_pred cCCCcEEEEecccccCcc---e-ec---cCcccceEEEecCCCcccC-CCcceEEEec--HHHHHHhccCCCCccccchH
Q 015729 166 YRHPALFLVDGVSSICAI---D-FR---MDEWGIDVALTGSQKALSL-PTGMGIVCAS--PKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~---~-~~---~~~~~~di~~~s~~K~l~g-~~g~G~l~~~--~~~~~~~~~~~~~~~~~~~~ 235 (401)
+|++||+|++|..... + .. .......+++.|.+|.++. +.++||+++. +.++..... .
T Consensus 222 --~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~----------~ 289 (430)
T PLN00145 222 --LGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKV----------V 289 (430)
T ss_pred --cCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHH----------H
Confidence 9999999999874321 1 11 1222356889999999632 2347999873 332221100 0
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccc-cCCCccCCceeEEEEc
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNC-TQKEEWFSDTVTAVIV 313 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~ 313 (401)
.....+... ...++.....++..+++.-.+..+++.+++++++++.+.+.|++. |+... .+ ....++++++
T Consensus 290 ~~~~~~~~~---~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P----~ga~y~~v~l 362 (430)
T PLN00145 290 DSIRNYLNI---STDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKP----EGSMFVMVKL 362 (430)
T ss_pred HHHHHHhcc---cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCC----CeeeEEEecc
Confidence 000111100 112334333444444432112236778888999999999999886 66543 23 2446788887
Q ss_pred CC----CC-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 314 PS----HI-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 314 ~~----~~-~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
|. +. +..+++..|.++.||.+.||......+++||++.. +.++++.++++|++.+.+..
T Consensus 363 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~--~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 363 DLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI--DPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred ChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhc
Confidence 53 22 55678877777779999999654456899998764 78999999999999987653
No 81
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=7.6e-28 Score=230.30 Aligned_cols=335 Identities=15% Similarity=0.134 Sum_probs=234.7
Q ss_pred CCCCCCcccccCCCcCChHHHHHHHccCcCCCCC----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 4 MYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 4 ~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
..+.++.||--+.+..+-+++.+++.++.....+ ....+...++++.+++++|.+. .+++++|++|+..++..
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~---~l~~~sG~~an~~ai~~ 124 (402)
T TIGR01821 48 TVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES---ALVFTSGYVANDATLAT 124 (402)
T ss_pred EEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe---EEEECchHHHHHHHHHH
Confidence 4556677777777666777777777665432211 1234567899999999998643 67777889999988876
Q ss_pred cCC--CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchH
Q 015729 80 TLS--PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS 157 (401)
Q Consensus 80 ~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~ 157 (401)
+.. +++.|+.....|.+.. ......|+++..++. .|++++++.++.....++++|++++++|++|.+.|++
T Consensus 125 l~~~~~~~~v~~~~~~h~s~~--~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~ 197 (402)
T TIGR01821 125 LAKIIPGCVIFSDELNHASMI--EGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIE 197 (402)
T ss_pred hhCCCCCCEEEEcchHhHHHH--HHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence 544 6665555444443332 334556777665543 2788888888643213578999999999999999999
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcc-ee--c-cC----cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAI-DF--R-MD----EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~-~~--~-~~----~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+|.++|++ +|+++|+|++|+.|.. +. . .. ...+|+++.+.+|.++ ..| |+++.++++++.+.....
T Consensus 198 ~i~~l~~~--~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~G-G~i~~~~~~~~~l~~~~~-- 271 (402)
T TIGR01821 198 EICDLADK--YGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVG-GYIAASRKLIDAIRSYAP-- 271 (402)
T ss_pred HHHHHHHH--cCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCC-ceeecCHHHHHHHHHhCc--
Confidence 99999999 9999999999986532 11 0 01 1236899899999994 555 888899888776653211
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeE
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (401)
+..+..+.++..++++.++++.+.+. +...++..++.+++++.|+++|+++..+ .+ .++
T Consensus 272 --------------~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~-~i~ 330 (402)
T TIGR01821 272 --------------GFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN----PS-HIV 330 (402)
T ss_pred --------------CceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC----CC-CEE
Confidence 11112345666677778888877654 4566677789999999999888876543 23 245
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.+.+++...+.++.+.|++++||.+.+...+ ....++||++..++|++|+++++++|+++++++|.
T Consensus 331 ~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~ 399 (402)
T TIGR01821 331 PVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLGL 399 (402)
T ss_pred EEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 5555432235678888876669998875332 12357999999999999999999999999998876
No 82
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=6e-28 Score=226.73 Aligned_cols=311 Identities=12% Similarity=0.074 Sum_probs=225.4
Q ss_pred CCcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCC
Q 015729 16 GPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 93 (401)
.|.+.|+.+++++.+.... ...+. .....++|+.++++++.++. ++++++|+++++..++.+++++||+|++++|.
T Consensus 32 ~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~~~lr~~ia~~~~~~~~-~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~ 109 (351)
T PRK14807 32 TPFELPEEVIKNIQEIVKSSQVNIYP-DPTAEKLREELARYCSVVPT-NIFVGNGSDEIIHLIMLAFINKGDVVIYPHPS 109 (351)
T ss_pred CCCCCCHHHHHHHHHHhhcCcccCCC-CccHHHHHHHHHHHhCCCcc-cEEEecCHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 3567788888888763321 11122 22357899999999998764 49999999999999988889999999999997
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEE
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li 173 (401)
|..+ ...++..|++++.++.+.++.+|++++++.++. ++++++++++++||||.+++.+++.+++++ ++.++|
T Consensus 110 y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~---~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~--~~~~~i 182 (351)
T PRK14807 110 FAMY--SVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK---YQPKLVFLCNPNNPTGSVIEREDIIKIIEK--SRGIVV 182 (351)
T ss_pred hHHH--HHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHh--CCCEEE
Confidence 6643 356788999999999887778999999999874 367999999999999999999999999998 778899
Q ss_pred EecccccCcc--eec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 174 VDGVSSICAI--DFR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 174 ~D~a~~~~~~--~~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
+|++|....- ... .......+++.|.+|.++ .+.++|+++.++++.+.+..... .+
T Consensus 183 vDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~--------------------~~ 242 (351)
T PRK14807 183 VDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKS--------------------PY 242 (351)
T ss_pred EeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccC--------------------CC
Confidence 9999853211 001 122345788999999994 34457999999988776654211 11
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHh
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (401)
..+... +.++...+....+++..+++.++++.+.+.|+++ |+.+..+ .+.++++.++ +..++.+.|.+
T Consensus 243 ~~~~~~---q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-----~~~~~~i~~~---~~~~~~~~l~~ 311 (351)
T PRK14807 243 NINSLS---QVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVYPS-----KTNFILVKFK---DADYVYQGLLE 311 (351)
T ss_pred CcCHHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC-----CccEEEEEcC---CHHHHHHHHHH
Confidence 133332 3333333433345667777788888888899876 7665332 2346778875 46788888876
Q ss_pred hCCeEEccCCC-CCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 329 RYNLSLGLGLN-KVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 329 ~~~i~v~~g~~-~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+ ||.+.++.. ....+++||++. +.++.+++++.|++++
T Consensus 312 ~-gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 312 R-GILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred C-CEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 6 999987642 223568999764 5788889998887753
No 83
>PRK08068 transaminase; Reviewed
Probab=99.97 E-value=4.5e-28 Score=230.86 Aligned_cols=315 Identities=12% Similarity=0.076 Sum_probs=219.5
Q ss_pred hHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 21 PDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----g~--~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
++.+.+++.+.... ...|.......++|+.+++++ |. ++++++++|+|+++++..++.+++++||+|++++|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P 126 (389)
T PRK08068 47 PEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDP 126 (389)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCC
Confidence 45667766653221 122333344667888888877 53 33325999999999999998899999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~ 167 (401)
+|+.+. ..++..|++++.++++.+ ..+|++++++.+.+ +++++++++|+||||.+++. ++|.++|++
T Consensus 127 ~y~~~~--~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~-- 198 (389)
T PRK08068 127 GYPDYL--SGVALARAQFETMPLIAENNFLPDYTKIPEEVAE----KAKLMYLNYPNNPTGAVATKAFFEETVAFAKK-- 198 (389)
T ss_pred CCcchH--HHHHhcCCEEEEeecccccCCCCCHHHHHHhccc----cceEEEEECCCCCCCCcCCHHHHHHHHHHHHH--
Confidence 877654 456789999999998753 45788999988863 56999999999999999986 467778888
Q ss_pred CCcEEEEecccccCcc----eec---cC-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 168 HPALFLVDGVSSICAI----DFR---MD-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~----~~~---~~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
++++||+|++|..... +.. .. .....+++.|.+|.++ .+.++|+++.++++.+.+.....
T Consensus 199 ~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~----------- 267 (389)
T PRK08068 199 HNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQD----------- 267 (389)
T ss_pred cCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHh-----------
Confidence 9999999999853211 111 11 1234688899999983 33447999999988776653211
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
.+..++++.. ..++..++..- ...+++.++++.++++.+.+.|++.|+.+..+ ..+.++++.+|++.+
T Consensus 268 ------~~~~~~~~~~-q~~~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~----~g~~~~~v~~~~~~~ 335 (389)
T PRK08068 268 ------HLFVSLFGAI-QDAAIEALLSD-QSCVAELVARYESRRNAFISACREIGWEVDAP----KGSFFAWMPVPKGYT 335 (389)
T ss_pred ------hccCCCChHH-HHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CeeEEEEEECCCCCC
Confidence 0011122222 12222222211 12356788889999999999998888765543 344567888876678
Q ss_pred HHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
+.++.+.|.+++||.+.+|.. ....+++||++.. +++++..++++|++
T Consensus 336 ~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~ 385 (389)
T PRK08068 336 SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT--DEERLREAVERIGK 385 (389)
T ss_pred HHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC--CHHHHHHHHHHHHH
Confidence 889999998767999999843 2235689998853 67777787777754
No 84
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.97 E-value=5.2e-28 Score=230.45 Aligned_cols=320 Identities=13% Similarity=0.044 Sum_probs=222.6
Q ss_pred CcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 17 PVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----g~--~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
+.+.++.+.+++.+.... ...+.......++|+.+++++ |. ++++++++|+|+++|+..++.+++.+||+|+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vl 120 (388)
T PRK07366 41 DLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFAL 120 (388)
T ss_pred CCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEE
Confidence 445567778877763321 122333344567888888877 43 3332599999999999999999999999999
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHh
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLL 163 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~ 163 (401)
+++|+|+.+. ..++..|++++.++++.+ +.+|++++++.+. .+++++++++|+||||.+++. ++|.++|
T Consensus 121 v~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a 194 (388)
T PRK07366 121 LLDPGYPSHA--GGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL----AQARLMVLSYPHNPTTAIAPLSFFQEAVAFC 194 (388)
T ss_pred EcCCCCcchH--HHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc----ccceEEEEeCCCCCCCccCCHHHHHHHHHHH
Confidence 9999877654 567789999999998754 3567888877765 356999999999999999975 4567788
Q ss_pred hhcCCCcEEEEecccccCcce--------eccCcc-cceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 164 DEYRHPALFLVDGVSSICAID--------FRMDEW-GIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~~--------~~~~~~-~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
++ +|++||+|++|...... .+.+.. ...+++.|.+|.++ .+.++|+++.++++++++...+..
T Consensus 195 ~~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~----- 267 (388)
T PRK07366 195 QQ--HDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAV----- 267 (388)
T ss_pred HH--cCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhh-----
Confidence 88 99999999998643210 111111 23578899999984 344579999999987776542110
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
. . .++++.. ..++.+++.. ....+++.++.++++++.+.+.|++.|+.+..+ ..+.++|+++
T Consensus 268 -------~--~---~~~~~~~-~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p----~~g~f~~~~~ 329 (388)
T PRK07366 268 -------V--D---FNQYRGI-LNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLP----EATMYVWAKL 329 (388)
T ss_pred -------c--c---cCCCHHH-HHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CeeEEEEEEC
Confidence 0 0 1112221 1222233321 122367788889999999999998887654433 3457888998
Q ss_pred CCCC--CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 314 PSHI--NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 314 ~~~~--~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
|+.. +..++++.|.++.||.+.+|... ...+++||++.. +++++++++++|++.
T Consensus 330 ~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 330 PEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH--DPDILEEAVERIAAF 387 (388)
T ss_pred CcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC--CHHHHHHHHHHHHHh
Confidence 7542 46788888766669999998432 224789998764 789999999999865
No 85
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.97 E-value=8.3e-28 Score=222.51 Aligned_cols=315 Identities=19% Similarity=0.161 Sum_probs=242.2
Q ss_pred CCcCChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCc
Q 015729 16 GPVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~ 94 (401)
-|.+.++++.+++.+.... ++.+.. ...++++.+++++|...++.|++++|+++.+..++++++.+||+|+++.|.|
T Consensus 32 nP~gp~~~~~~~~~~~~~~~~rYPd~--~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf 109 (356)
T COG0079 32 NPYGPPPKVIEAIRAALDKLNRYPDP--DYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTF 109 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhhccCCCC--cHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCCh
Confidence 4777778888888775532 333333 5779999999999954444588899999999999999999999999999964
Q ss_pred chHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 95 FSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
..+ ...++..|++++.++... +..|.+.+.+.+++ +++++++++||||||...+.++|.++++..+.+++|++
T Consensus 110 ~~Y--~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~----~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVv 182 (356)
T COG0079 110 SMY--EIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRD----KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVI 182 (356)
T ss_pred HHH--HHHHHhcCCeEEEecccc-cccCHHHHHHhhhc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 433 356888999999999988 88899999998874 56999999999999999999999999998545999999
Q ss_pred ecccccCccee--ccC-cccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 175 DGVSSICAIDF--RMD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 175 D~a~~~~~~~~--~~~-~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
|+|+.-.+.+. ... ..+.-+++-|.+|.+ |.+| +|+++.++++++.+...+. ++
T Consensus 183 DEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~-gLAGlRlGy~ia~~~~i~~l~~vr~--------------------p~ 241 (356)
T COG0079 183 DEAYIEFSPESSLELLKYPPNLIVLRTFSKAF-GLAGLRVGYAIANPELIAALNKVRP--------------------PF 241 (356)
T ss_pred eCchhhcCCchhhhhccCCCCEEEEEecHHhh-hcchhceeeccCCHHHHHHHHHhcC--------------------CC
Confidence 99987544321 111 233468888999987 4655 5999999999988876532 44
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCc-cccCCCccCCceeEEEEcCCCCCHHHHHHHHHh
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK-NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (401)
+.+....++..++++.- +.+++..++..+.++++.+.|+++|+. +..+ .. .++.+++++.. +..+.+.|++
T Consensus 242 ~v~~~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS----~a-NFvlv~~~~~~-~~~l~~~L~~ 313 (356)
T COG0079 242 NVSSPALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFPS----QA-NFVLVRVPDAE-AAALAEALLK 313 (356)
T ss_pred CCCHHHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC----CC-cEEEEECCCcc-HHHHHHHHHH
Confidence 56665555666655533 346788889999999999999998744 4442 23 46778886533 5688899987
Q ss_pred hCCeEEccCCC-CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 329 RYNLSLGLGLN-KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 329 ~~~i~v~~g~~-~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+ ||.++.... ....+++||+. + |++|-++++++|+++++.
T Consensus 314 ~-giivR~~~~~~~~~~~lRitv-g--t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 314 K-GILVRDCSSVGLLPGYLRITV-G--TPEENDRLLAALREVLKG 354 (356)
T ss_pred C-CEEEEeCCCCCCCCCeEEEEe-C--CHHHHHHHHHHHHHHHhc
Confidence 7 999998754 33456899964 3 788889999999998864
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=5.9e-28 Score=228.12 Aligned_cols=317 Identities=12% Similarity=0.091 Sum_probs=227.1
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
+.+.++.+++++.+.......+... ...++++.++++++.++. ++++++|+++++..++..++++||.|++..|+|+.
T Consensus 43 ~~~~~~~~~~a~~~~~~~~~~Y~~~-~~~~Lr~~ia~~~~~~~~-~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~ 120 (369)
T PRK08153 43 GFGPSPSVIAAMREAAAEIWKYGDP-ENHDLRHALAAHHGVAPE-NIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPT 120 (369)
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCCC-ccHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchH
Confidence 5677788888887643221222212 267999999999988654 59999999999999988889999999999998776
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
+. ..++..|++++.++.+.+ .+|++++++.+.. .+++++++++|+||||.+.+.+++.++++.++++++||+|+
T Consensus 121 ~~--~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~---~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE 194 (369)
T PRK08153 121 FN--YHVAGFGGRLVTVPYRDD-REDLDALLDAARR---ENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDE 194 (369)
T ss_pred HH--HHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcc---cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeC
Confidence 54 345668999999998655 4788888877653 35789999999999999999999999988755699999999
Q ss_pred ccccCcce---eccC-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 177 VSSICAID---FRMD-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 177 a~~~~~~~---~~~~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
++...... .... .....+++.|.+|.++ .+..+|+++++++..+.+..... .++.
T Consensus 195 ~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~--------------------~~~~ 254 (369)
T PRK08153 195 AYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRN--------------------HFGM 254 (369)
T ss_pred chhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhc--------------------CCCC
Confidence 98643211 1111 1224578899999985 33446999999988776653211 1124
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC-CCCHHHHHHHHHhhC
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-HINSSEIVRRAWQRY 330 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~ 330 (401)
+...+.++.++++. ...+++.++.++++++.+.+.|++.|+.... ....++++.++. ...+.++.+.|.++
T Consensus 255 s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p-----~~~~f~~~~~~~~~~~a~~l~~~l~~~- 326 (369)
T PRK08153 255 NRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLP-----SATNFVAIDCGRDGAFARAVLDGLIAR- 326 (369)
T ss_pred CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC-----CcCcEEEEECCCCcccHHHHHHHHHHC-
Confidence 45444455555531 1225667778888888899989887775432 123466777642 34567888888766
Q ss_pred CeEEc-cCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 331 NLSLG-LGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 331 ~i~v~-~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
||.++ ++... ..+++|+++. +++|++.+++++++++..+
T Consensus 327 Gi~v~~p~~~~-~~~~iRis~~---~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 327 DIFVRMPGVAP-LDRCIRVSCG---PDEELDLFAEALPEALEAA 366 (369)
T ss_pred CeEEeeCCCCC-CCCeEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 99995 55322 2468999754 6899999999999988643
No 87
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.2e-27 Score=227.22 Aligned_cols=322 Identities=16% Similarity=0.114 Sum_probs=226.7
Q ss_pred CcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCc
Q 015729 17 PVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~ 94 (401)
+.+.++.+.+++.+.... ...+.......++|+.+++++|.++. ++++++|+++|+..++.+++.+||+|++++++|
T Consensus 39 ~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~-~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y 117 (380)
T PRK06225 39 HLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDD-EALITAGATESLYLVMRAFLSPGDNAVTPDPGY 117 (380)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 456677788887765432 12233344578999999999998765 599999999999999988899999999999987
Q ss_pred chHHHHHHHHHcCCcEEEEeCCC---CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 95 FSLLWIDQQQRLNFNVDVVESDW---GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~---~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
+.. ...++..|++++.++++. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++ +
T Consensus 118 ~~~--~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~--~ 189 (380)
T PRK06225 118 LII--DNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE----NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARD--N 189 (380)
T ss_pred cch--HHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC----CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--C
Confidence 654 355678899999988642 346899999998864 5689999999999999986 7778888888 9
Q ss_pred CcEEEEecccccC---cceeccCcccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 169 PALFLVDGVSSIC---AIDFRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 169 ~~~li~D~a~~~~---~~~~~~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
|+++|+|+++... ............+++.|.+|++ |++| +|++++++++.+.+.... .
T Consensus 190 ~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RiG~i~~~~~l~~~~~~~~----------------~ 252 (380)
T PRK06225 190 DAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIF-GMAGLRIGAVVATPDLIEVVKSIV----------------I 252 (380)
T ss_pred CcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhc-CCccceeEEEecCHHHHHHHHHHH----------------h
Confidence 9999999997421 1111101123567788999998 4455 699999998877655321 0
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC-CCCHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HINSSE 321 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 321 (401)
+ ..+.+.....++.++++... ..+++.++.++++.+.+.+.|+++ |+.+... + ..+.++++.+++ +.+..+
T Consensus 253 ~---~~~~~~~~~~~a~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~--~~g~~~~~~~~~~~~~~~~ 325 (380)
T PRK06225 253 N---DLGTNVIAQEAAIAGLKVKD-EWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVY-P--SHGNMMVIDISEAGIDPED 325 (380)
T ss_pred c---ccCCCHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHhCcCCccccC-C--CCCeEEEEEcccccCCHHH
Confidence 1 11233333333334443211 124556666777788888888885 6433211 1 123467788753 467889
Q ss_pred HHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 322 IVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+++.|.++ ||.+.+|... ...+++|+++.. +++++++++++|+++++++.
T Consensus 326 l~~~l~~~-gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 326 LVEYLLER-KIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred HHHHHHHC-CEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHHHHHHhh
Confidence 99999855 9999998432 124589998754 79999999999999998653
No 88
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=2.7e-28 Score=229.62 Aligned_cols=310 Identities=14% Similarity=0.081 Sum_probs=225.0
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.++++.+++++.+.......+ +.....++++.++++++.+++ ++++++|+++++..++.+++++||+|++++|+|+
T Consensus 39 n~~~~~~~v~~a~~~~~~~~~~Y-p~~g~~~Lr~aia~~~~~~~~-~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~ 116 (366)
T PRK01533 39 NPFGCSPRVLDELQKSWLDHALY-PDGGATTLRQTIANKLHVKME-QVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFP 116 (366)
T ss_pred CCCCCCHHHHHHHHHHHHhcCcC-CCCCHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHH
Confidence 46778888999887643322222 233467899999999998764 5999999999999999999999999999999766
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
.+. ..++..|++++.++.+. +.+|++++++.+++ +++++++++|+||||.+++.+++.++++....+.++|+|
T Consensus 117 ~~~--~~~~~~g~~v~~v~~~~-~~~d~~~l~~~~~~----~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~~~iiD 189 (366)
T PRK01533 117 QYR--HHAIIEGCEVKEVALNN-GVYDLDEISSVVDN----DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVID 189 (366)
T ss_pred HHH--HHHHHcCCEEEEeecCC-CCcCHHHHHHHhCc----CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCCEEEEE
Confidence 543 56788899999999864 46899999998864 568999999999999999988777776653234467889
Q ss_pred cccccCcce------ec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCC
Q 015729 176 GVSSICAID------FR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (401)
Q Consensus 176 ~a~~~~~~~------~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 247 (401)
++|...... .. .......+++.|.+|.++ .+..+|++++++++.+.+.....
T Consensus 190 e~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~-------------------- 249 (366)
T PRK01533 190 EAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRL-------------------- 249 (366)
T ss_pred ccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcC--------------------
Confidence 997532211 01 112345689999999985 33446999999988877754311
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHH
Q 015729 248 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (401)
Q Consensus 248 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (401)
+++.+.....++.++++. ....+..++...++++++.+.++.+|+++..+ .+.++++.++ +..++.+.|.
T Consensus 250 ~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~-----~~nf~~~~~~---~~~~~~~~l~ 319 (366)
T PRK01533 250 PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKENEIPFYQS-----QTNFIFLPVE---NGGEIYEACA 319 (366)
T ss_pred CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-----cCcEEEEeCC---CHHHHHHHHH
Confidence 123555444444445431 11245566777788888888888888776653 2346778775 4678888888
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 328 ~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++ ||.|++. ++++||++. +.+|.++++++|+++++..
T Consensus 320 ~~-GI~Vr~~-----~~~iRis~~---~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 320 HA-GFIIRPF-----PNGVRITVG---TREQNEGVISVLQQHFENK 356 (366)
T ss_pred HC-CcEEccC-----CCceEEeCC---CHHHHHHHHHHHHHHHHhc
Confidence 65 9999962 468999643 7899999999999887643
No 89
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=1.5e-27 Score=228.36 Aligned_cols=299 Identities=16% Similarity=0.113 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
..+...++++.+++++|.+ +.+++++| ++++..++.+++++||.|++.++.|++.. ..++..+++++.++.
T Consensus 85 ~~~l~~~l~~~la~~~g~~--~~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~--~~~~~~~~~~~~~~~---- 155 (397)
T PRK06939 85 TQDLHKELEEKLAKFLGTE--DAILYSSC-FDANGGLFETLLGKEDAIISDALNHASII--DGVRLCKAKRYRYAN---- 155 (397)
T ss_pred CcHHHHHHHHHHHHHhCCC--cEEEEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHH--HHHHhcCCceEEeCC----
Confidence 4567789999999999875 33666665 88999888889999999999999887764 345667888777654
Q ss_pred CCChHHHHHHHhccCCC--CceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec------cC--c
Q 015729 120 GAKLDVLASKLAADTAH--TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR------MD--E 189 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~--~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~------~~--~ 189 (401)
.|++++++.+++..++ ++++++..+.+|++|...++++|.++|++ +|++||+|++|+.+..... .. .
T Consensus 156 -~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~--~~~~li~De~~~~g~~~~~~~~~~~~~~~~ 232 (397)
T PRK06939 156 -NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADK--YDALVMVDDSHAVGFVGENGRGTVEHFGVM 232 (397)
T ss_pred -CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHH--hCCEEEEECcccccCcCCCCCCHHHHcCCC
Confidence 3889999888642212 67788888888999999999999999999 9999999999975432211 11 1
Q ss_pred ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 015729 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (401)
Q Consensus 190 ~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~ 269 (401)
.++|++++|.||+++++. .|++++++++++.+....... .+.++++...++++.++++.+..
T Consensus 233 ~~~~i~~~S~sK~~~g~r-~G~v~~~~~~~~~l~~~~~~~----------------~~~~~~~~~~~~a~~~al~~~~~- 294 (397)
T PRK06939 233 DRVDIITGTLGKALGGAS-GGYTAGRKEVIDWLRQRSRPY----------------LFSNSLAPAIVAASIKVLELLEE- 294 (397)
T ss_pred CCCcEEEEECHHHhCccC-ceEEEeCHHHHHHHHHhCccc----------------cccCCCCHHHHHHHHHHHHHHhc-
Confidence 247899999999996554 599999999887765421100 01223444445666677776643
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEE
Q 015729 270 GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVF 346 (401)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~ 346 (401)
.++.++++.++.+++++.|+++|++...+ .. .++.+.++.+.+..++.+.|.++ ||.+.++.++. ...++
T Consensus 295 -~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~i 367 (397)
T PRK06939 295 -SDELRDRLWENARYFREGMTAAGFTLGPG----EH-PIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVPKGQARI 367 (397)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHcCCCcCCC----CC-CEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCCCCCceE
Confidence 25678889999999999999887765432 12 23444454434567899999887 99887653321 23579
Q ss_pred EEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 347 RIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 347 Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
|+++..+++++|+++++++|+++++++|+
T Consensus 368 Ri~~~~~~~~~~i~~~l~~L~~~~~~~~~ 396 (397)
T PRK06939 368 RTQMSAAHTKEQLDRAIDAFEKVGKELGV 396 (397)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 99887778999999999999999988775
No 90
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=1.6e-27 Score=225.28 Aligned_cols=289 Identities=17% Similarity=0.145 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 120 (401)
.+...++++.++++++.+. .+++++ |++++..++.+++++||+|++..+.|++.. ..++..|++++.++.
T Consensus 60 ~~~~~~l~~~la~~~~~~~--~i~~~~-G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~--~~~~~~g~~~~~~~~----- 129 (360)
T TIGR00858 60 SPLHEELEEELAEWKGTEA--ALLFSS-GYLANVGVISALVGKGDLILSDALNHASLI--DGCRLSGARVRRYRH----- 129 (360)
T ss_pred cHHHHHHHHHHHHHhCCCC--EEEECc-hHHHHHHHHHHhCCCCCEEEEEccccHHHH--HHHHhcCCceEEecC-----
Confidence 4567889999999998543 355555 567776677778899999999988766553 345667888887763
Q ss_pred CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec---------cCccc
Q 015729 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR---------MDEWG 191 (401)
Q Consensus 121 ~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~---------~~~~~ 191 (401)
+|++++++.+++.++.+++++++.+++|++|...++++|.++|++ +|+++|+|++|+.+....+ ....+
T Consensus 130 ~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
T TIGR00858 130 NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAER--YGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEP 207 (360)
T ss_pred CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHH--cCcEEEEECcccccCcCCCCCchHHhcCCCccC
Confidence 489999999875432356888888999999999999999999999 9999999999986543211 12235
Q ss_pred ceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcH
Q 015729 192 IDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGL 271 (401)
Q Consensus 192 ~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~ 271 (401)
.++++.|.+|+++ +.| |+++.++++.+.+...... + .+..+.+...++++.++++.... .
T Consensus 208 ~~i~i~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~~~------------~----~~~~~~~~~~~~a~~~al~~~~~--~ 267 (360)
T TIGR00858 208 VDIQVGTLSKALG-SYG-AYVAGSQALIDYLINRART------------L----IFSTALPPAVAAAALAALELIQE--E 267 (360)
T ss_pred CcEEEEechhhhh-ccC-cEEEcCHHHHHHHHHhCcc------------c----eecCCCCHHHHHHHHHHHHHHhh--C
Confidence 7899999999985 566 8999988887765422110 0 00112444555667777776543 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEE
Q 015729 272 ENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRI 348 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri 348 (401)
++.++++.++.+++.+.|+++++++..+ ...++++.++...+..++.+.|.++ ||.+.++..+ ..++++|+
T Consensus 268 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~iRi 341 (360)
T TIGR00858 268 PWRREKLLALIARLRAGLEALGFTLMPS-----CTPIVPVIIGDNASALALAEELQQQ-GIFVGAIRPPTVPAGTSRLRL 341 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCCC-----CCCEEEEEeCCHHHHHHHHHHHHHC-CeeEeeeCCCCCCCCCceEEE
Confidence 5678999999999999999887665532 2346777775444567899999766 9999865332 12458999
Q ss_pred eecccCCHHHHHHHHHHHH
Q 015729 349 GHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 349 ~~~~~~~~~di~~~~~~i~ 367 (401)
++..+++++|+++++++|+
T Consensus 342 s~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 342 TLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred EEcCCCCHHHHHHHHHhhC
Confidence 9998899999999999873
No 91
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.97 E-value=8.9e-28 Score=229.37 Aligned_cols=318 Identities=14% Similarity=0.046 Sum_probs=220.3
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh----cCC---CCceEEecCChhHHHHHHHhccCCC---CCe
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----KTT---SGTPFLIPTTGTGAWESALTNTLSP---GDR 86 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~---~~~~i~~~~g~t~a~~~~~~~~~~~---gd~ 86 (401)
+.++++.+.+++.+.......|.......++|+.+++++ |.+ +++++++|+|+++|+..++.+++++ ||+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~ 119 (396)
T PRK09147 40 KHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPL 119 (396)
T ss_pred CCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCE
Confidence 345567788887764332222322233456777777655 643 3336999999999999999999999 899
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHH
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRK 161 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~ 161 (401)
|+++.|+|+.+. ..++..|++++.++++.+ +.+|++++++.+.+ +++++++++|+||||.+++ +++|.+
T Consensus 120 vlv~~P~y~~~~--~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~----~~k~i~l~nP~NPTG~~~s~~~~~~l~~ 193 (396)
T PRK09147 120 VVCPNPFYQIYE--GAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA----RTQLLFVCSPGNPTGAVLPLDDWKKLFA 193 (396)
T ss_pred EEEcCCCccchH--HHHHhcCCEEEEeccCccccCccCHHHHHHHHhh----ccEEEEEcCCCCCcCccCCHHHHHHHHH
Confidence 999999776543 557788999999998654 46899999887763 5799999999999999996 566778
Q ss_pred HhhhcCCCcEEEEecccccCcce-----ec-c--------CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCC
Q 015729 162 LLDEYRHPALFLVDGVSSICAID-----FR-M--------DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAK 226 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~-----~~-~--------~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~ 226 (401)
+|++ ++++||+|++|...... .. . ......+++.|.+|.++ .+.++|++++++++.+.+....
T Consensus 194 ~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~ 271 (396)
T PRK09147 194 LSDR--YGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYR 271 (396)
T ss_pred HHHH--cCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHh
Confidence 8888 99999999998753211 00 0 11234589999999762 2345799999998877665321
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
. +...+.+.....++.+++. ....+++.+++++++++.+.+.|.+. +.+..+ ..+
T Consensus 272 ~------------------~~~~~~~~~~q~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p----~~g 326 (396)
T PRK09147 272 T------------------YHGCAMPPAVQAASIAAWN--DEAHVRENRALYREKFDAVTPILAPV-LDVQLP----DAG 326 (396)
T ss_pred h------------------hcccCCCHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCC----Cee
Confidence 0 0111233333333333332 12235667788888888888888774 333322 345
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--------CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--------VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.++|+++| .+..++++.|.++.||.+.+|... ...+++||++.. +++++++++++|+++++
T Consensus 327 ~f~~~~~~--~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 327 FYLWAKVP--GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVDFCR 395 (396)
T ss_pred EEEEEECC--CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 78889886 456788888876669999998432 124689998875 68899999999988763
No 92
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=2.6e-27 Score=227.10 Aligned_cols=336 Identities=15% Similarity=0.139 Sum_probs=231.7
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCC---C-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDY---R-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~---~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
+.+++++.||-.+.+..+-+++.+++.+..... + .+...+...++++.+++++|.+. .++.++|++|+..++.
T Consensus 48 ~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~---~~~~~sG~~an~~ai~ 124 (407)
T PRK09064 48 VTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA---ALVFTSGYVSNDATLS 124 (407)
T ss_pred EEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc---EEEECcHHHHHHHHHH
Confidence 345566667766665555555556555543221 1 12346678899999999998533 5666777888887776
Q ss_pred ccCC--CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 79 NTLS--PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 79 ~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
.+.. +++.|+.....|.+.. ......++++..++. .|++++++.++....+++++|++++++|++|.+.|+
T Consensus 125 ~l~~~~~~~~i~~~~~~h~s~~--~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l 197 (407)
T PRK09064 125 TLAKLIPDCVIFSDELNHASMI--EGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPI 197 (407)
T ss_pred HHhCCCCCCEEEEeCcchHHHH--HHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCH
Confidence 5443 6655544444333332 234556777665553 278899988864322367899999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcc-e-----eccCc--ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAI-D-----FRMDE--WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~-~-----~~~~~--~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~ 228 (401)
++|.++|++ +|+++|+|++|+.|.. + ..... ..+|+++.|.+|.+ |..| |++++++++.+.+.....
T Consensus 198 ~~i~~l~~~--~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~G-G~~~~~~~~~~~l~~~~~- 272 (407)
T PRK09064 198 AEICDLADK--YNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMG-GYIAGSAALVDAVRSYAP- 272 (407)
T ss_pred HHHHHHHHH--cCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccC-ceEecCHHHHHHHHHhCc-
Confidence 999999999 9999999999985432 1 01111 24689999999998 4566 899999888776643211
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
+..+..+.++..++++.++++.+.+. ...+++..++.+++.+.|+++|+++..+ .+ .+
T Consensus 273 ---------------~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~-~i 330 (407)
T PRK09064 273 ---------------GFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMPN----ES-HI 330 (407)
T ss_pred ---------------cccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC----CC-CE
Confidence 10112234555667777888877654 3456788899999999999988876542 23 35
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.+.+++..++.++.+.|+++.||.+.+...+. ...++||++..++|++|+++++++|+++++++++
T Consensus 331 v~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~~ 400 (407)
T PRK09064 331 VPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLGL 400 (407)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 556664333466888888765699998764321 2357999999999999999999999999988766
No 93
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.4e-27 Score=227.01 Aligned_cols=317 Identities=15% Similarity=0.101 Sum_probs=219.2
Q ss_pred ChHHHHHHHccCc-CCCCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCC
Q 015729 20 IPDQVIRAMNRNN-EDYRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (401)
Q Consensus 20 ~~~~v~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~ 93 (401)
.++.+++++.... .....|.......++|+.+++++ |.. .++++++|+|+++|+..++.+++++||+|+++.|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~ 122 (384)
T PRK06348 43 TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPY 122 (384)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 3455555443311 11222332333456777777776 322 33569999999999999999999999999999998
Q ss_pred cchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 94 QFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
|+.+. ..++..|++++.++... ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++ +
T Consensus 123 y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~--~ 194 (384)
T PRK06348 123 FTPYK--DQIEMVGGKPIILETYEEDGFQINVKKLEALITS----KTKAIILNSPNNPTGAVFSKETLEEIAKIAIE--Y 194 (384)
T ss_pred CcchH--HHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc----CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--C
Confidence 77654 55677899988888643 346899999998863 5689999999999999997 5667778888 9
Q ss_pred CcEEEEecccccCcce---e---ccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 169 PALFLVDGVSSICAID---F---RMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~---~---~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+++||+|++|...... . .... ....+++.|.+|.++ .+.++|++++++++.+.+....
T Consensus 195 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~-------------- 260 (384)
T PRK06348 195 DLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIIN-------------- 260 (384)
T ss_pred CeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHH--------------
Confidence 9999999998743211 0 1111 235688899999985 3445799999988766654321
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC-CCC
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HIN 318 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~ 318 (401)
.. ...+.+.....++..++... +..+++.++.++++.+.+.+.|+++ ++++..+ ..+.++|+.+|+ +.+
T Consensus 261 --~~--~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p----~gg~~~~~~~~~~~~~ 331 (384)
T PRK06348 261 --EG--ICFSAPTISQRAAIYALKHR-DTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPP----KGSIYAFINIKKTGLS 331 (384)
T ss_pred --Hh--ccCCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceeccC----CeeEEEEEecccCCCC
Confidence 01 01123444334444444321 1124567777888888899999876 5554433 345678888863 567
Q ss_pred HHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
..++++.|.+++||.+.+|.... ..+++||++. .+++++++++++|+++
T Consensus 332 ~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 332 SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence 88999988776799999985422 2468999874 4889999999988653
No 94
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.97 E-value=1.3e-27 Score=229.21 Aligned_cols=322 Identities=13% Similarity=0.061 Sum_probs=225.5
Q ss_pred CChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcC-----------CCCceEEecCChhHHHHHHHhccCCCCC
Q 015729 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKT-----------TSGTPFLIPTTGTGAWESALTNTLSPGD 85 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~-----------~~~~~i~~~~g~t~a~~~~~~~~~~~gd 85 (401)
.+++.+.+++.+.... ...|.......++|+.++++++. -.++++++|+|+++|+..++.+++++||
T Consensus 50 ~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd 129 (412)
T PTZ00433 50 LTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGD 129 (412)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCC
Confidence 4677788887764322 22233334567889999988862 1345699999999999999999999999
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHH
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVR 160 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~ 160 (401)
+|+++.|+|+.+. ..++..|++++.++.+. ++.+|++++++.+.+ +++++++++|+||||.+++ +++|.
T Consensus 130 ~vlv~~P~y~~~~--~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~NPtG~~~s~~~~~~l~ 203 (412)
T PTZ00433 130 NILVPAPGFPHYE--TVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD----RTKALIMTNPSNPCGSNFSRKHVEDII 203 (412)
T ss_pred EEEEccCCcccHH--HHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc----CceEEEEeCCCCCCCcccCHHHHHHHH
Confidence 9999999877653 56788999999999864 357899999998864 5699999999999999987 56678
Q ss_pred HHhhhcCCCcEEEEecccccCcce-------eccCcccceEEEecCCCccc-CCCcceEEEe-c-----HHHHHHhccCC
Q 015729 161 KLLDEYRHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALS-LPTGMGIVCA-S-----PKALEASKTAK 226 (401)
Q Consensus 161 ~l~~~~~~~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~-~-----~~~~~~~~~~~ 226 (401)
++|++ +|++||+|+++...... .........+++.|.+|.++ .+.++|++++ + +++++.+....
T Consensus 204 ~~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~ 281 (412)
T PTZ00433 204 RLCEE--LRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG 281 (412)
T ss_pred HHHHH--cCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh
Confidence 88888 99999999998643211 01111123578899999883 3445799986 2 34444333210
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCC
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFS 305 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 305 (401)
.. .++.+.....++..++..-.+..+++.+++++++++.+.+.|++. |+.+..+ ..
T Consensus 282 ----------------~~---~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~g 338 (412)
T PTZ00433 282 ----------------ML---VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMP----RG 338 (412)
T ss_pred ----------------hc---cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----Ce
Confidence 00 112333333333333332112236677888889999999999875 6665443 24
Q ss_pred ceeEEEEcCC----C-CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 306 DTVTAVIVPS----H-INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 306 ~~~~~~~~~~----~-~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.++|+++|. + .+..++.+.|.+++||.+.+|......+++|+++.. .++++++++++|.++++..
T Consensus 339 g~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 339 SMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEVLREAVERIKAFCERH 409 (412)
T ss_pred eEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 5678888764 2 256789999886669999998554346799998764 5889999999999988753
No 95
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.97 E-value=6e-28 Score=228.36 Aligned_cols=327 Identities=20% Similarity=0.175 Sum_probs=234.5
Q ss_pred CCcccccCCCcCChHHHHHHHcc---CcCCCCCccHHHHHHHHHHHHHHHhc------CCCCceEEecCChhHHHHHHHh
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNR---NNEDYRSPAVPALTKTLLEDIKKIFK------TTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~---~~~~~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
.+.+.+..+. +.+++++++..+ .......+.......++++.++++++ .+....+++++|+.+++..+..
T Consensus 8 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~ 86 (363)
T PF00155_consen 8 SNAPLLLSQN-PPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLR 86 (363)
T ss_dssp SSSTSSTTSS-HHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHH
T ss_pred CCCCCCcccc-cchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhh
Confidence 3444444444 455666666654 22223345555677899999999998 4444258888888888887777
Q ss_pred cc-CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhccCCC--CceEEEEEecCCCcccc
Q 015729 79 NT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAH--TIKAICIVHNETATGVT 153 (401)
Q Consensus 79 ~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~--~~~~i~~~~~~n~tG~~ 153 (401)
.+ ..+||+|++++|+|+++. ..++..|++++.++.+ .++.+|++++++.+++...+ +++++++++|+||||..
T Consensus 87 ~~~~~~~~~vlv~~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~ 164 (363)
T PF00155_consen 87 LLKINPGDTVLVPDPCYPSYI--EAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSV 164 (363)
T ss_dssp HHHSSTTSEEEEEESSSTHHH--HHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB
T ss_pred cccccccccceecCCcccccc--ccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccc
Confidence 77 789999999999887664 6678899999999864 56678999999999863222 46899999999999999
Q ss_pred cchHHHHHH---hhhcCCCcEEEEecccccCcce--------eccCcccceEEEecCCCcccCCCc--ceEEEecHHHHH
Q 015729 154 NNLSKVRKL---LDEYRHPALFLVDGVSSICAID--------FRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALE 220 (401)
Q Consensus 154 ~~l~~i~~l---~~~~~~~~~li~D~a~~~~~~~--------~~~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~ 220 (401)
++.+++.++ |++ +|++||+|++|+.+... ...+.....+++.|.+|.++ .+| +|++++++++.+
T Consensus 165 ~~~~~l~~l~~~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRvG~i~~~~~~~~ 241 (363)
T PF00155_consen 165 LSLEELRELAELARE--YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG-LPGLRVGYIVAPPELIE 241 (363)
T ss_dssp --HHHHHHHHHHHHH--TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT-SGGGTEEEEEEEHHHHH
T ss_pred cccccccchhhhhcc--cccceeeeeceeccccCCCccCcccccccccccceeeeecccccc-ccccccccccchhhhhh
Confidence 986665555 999 99999999999865433 11122223689999999984 444 699999998877
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE--EGLENVIERHRRLGKATRLAVEAWGLKNCT 298 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~--~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 298 (401)
.+... ...+. .+......+.+++..... ..+++.+++++++.+.+.+.|++.|+.+..
T Consensus 242 ~l~~~---------------~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~ 301 (363)
T PF00155_consen 242 RLRRF---------------QRSGL-----SSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLP 301 (363)
T ss_dssp HHHHH---------------HHHTT-----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEH
T ss_pred hhhhc---------------ccccc-----ccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheee
Confidence 66532 11111 233333333444433322 146788999999999999999998888776
Q ss_pred CCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
+ ..+.++++.++.. +..++.+.|.+++||.+.+|..+...+++|+++ +..+++++++++++|
T Consensus 302 ~----~~~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 302 P----EAGFFLWVRLDPN-DAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp H----SBSSEEEEEESHH-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred c----cCccEEEEEcccc-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 4 2556777777432 567999999987799999986654578999988 778999999999986
No 96
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.97 E-value=1.2e-27 Score=224.64 Aligned_cols=319 Identities=15% Similarity=0.134 Sum_probs=228.2
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCC----------
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGD---------- 85 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd---------- 85 (401)
|-+.++++|++++.+....+ ....+...++++.+++++|.+. +++++|+|+|+.+++.+++++||
T Consensus 21 g~s~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~a~~~g~~~---~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s 95 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQNY--FEIKELVNKTGEYIANLLGVED---AVIVSSASAGIAQSVAAVITRGNRYLVENLHDS 95 (363)
T ss_pred CCCCCCHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHhhCCCe---EEEEcCHHHHHHHHHHHHhcCCCcchhhccccc
Confidence 45568999999999865443 2456889999999999999864 78999999999999999899988
Q ss_pred -----eEEEEcCCcchH--HHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEE-EEecCCCcccccchH
Q 015729 86 -----RIISFLIGQFSL--LWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAIC-IVHNETATGVTNNLS 157 (401)
Q Consensus 86 -----~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~-~~~~~n~tG~~~~l~ 157 (401)
+|+++.+.++.+ .+.......|+++++++.+ +.+|++++++++++ ++++++ +++++|++|.+.|++
T Consensus 96 ~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~~----~t~ai~~v~~~~~~~g~~~~~~ 169 (363)
T TIGR01437 96 KIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAITE----KTAAILYIKSHHCVQKSMLSVE 169 (363)
T ss_pred ccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcCh----hceEEEEEecCCCCcCCcCCHH
Confidence 888877533322 1345667789999998863 46899999999984 557665 556789999999999
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
+|.++|++ +|+++|+|++|+... ......++|++++|+||++.|+. .|+++.+++.++.+...... ..
T Consensus 170 ~i~~~a~~--~gi~vivD~a~~~~~--~~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~~~-~~------ 237 (363)
T TIGR01437 170 DAAQVAQE--HNLPLIVDAAAEEDL--QKYYRLGADLVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQSKG-IG------ 237 (363)
T ss_pred HHHHHHHH--cCCeEEEECCCCCch--HHHHHcCCCEEEEeCCcccCCCc-eEEEEEcHHHHHHHHhccCC-Cc------
Confidence 99999999 999999999997321 11224578999999999998777 69999888887765432110 00
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc-CC--ceeEEEEc
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW-FS--DTVTAVIV 313 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~--~~~~~~~~ 313 (401)
..++.+ ...++++.++++.+.+.+.+. .++..++.+.+++.|.++ |+.+....+.. .. ...+.+..
T Consensus 238 -~~~~~~--------~~~~~gl~aAl~~~~~~~~~~-~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~ 307 (363)
T TIGR01437 238 -RAMKVG--------KENILGLTAALEQYLSTGKES-GAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDE 307 (363)
T ss_pred -ceeccC--------HHHHHHHHHHHHHHHccCccc-HHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEec
Confidence 111112 134678888998887655333 334445677899999987 88776422111 11 12233332
Q ss_pred C-CCCCHHHHHHHHHhh-CCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 314 P-SHINSSEIVRRAWQR-YNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 314 ~-~~~~~~~l~~~L~~~-~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
. .+.+..++.+.|.++ .+|.+++. ....+.+|+++.. ++++|++.++++|++++
T Consensus 308 ~~~g~~~~~l~~~L~~~~~~I~~r~~--~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 308 SELGMTAADVVQALRQGEPAIYTRGY--KANEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred cCCCCCHHHHHHHHhcCCCCEEEeee--eecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 1 367889999999764 23776652 2235578887665 77999999999998763
No 97
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.4e-27 Score=225.97 Aligned_cols=313 Identities=15% Similarity=0.109 Sum_probs=221.9
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
|...++.+.+++.+.......+..... .++++.+++++|.++ +++++++|+++++..++.+++++||+|++..|+|+.
T Consensus 47 ~~~~~~~~~~al~~~~~~~~~Y~~~~g-~~lr~~ia~~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~ 124 (371)
T PRK05166 47 PLGPSPAVRRAFADIAELLRLYPDPQG-RALREAIAARTGVPA-DRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPL 124 (371)
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCCCcH-HHHHHHHHHHhCcCH-HHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHH
Confidence 456677888888763222112222222 389999999999865 459999999999999988889999999999997665
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
.. ..++..|++++.++.+.++.+|++++++.+++ +++++++++++||||.+++.+++.++++....+++||+|+
T Consensus 125 ~~--~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De 198 (371)
T PRK05166 125 HE--DYPTMMGARVERVTVTPDLGFDLDALCAAVAR----APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDE 198 (371)
T ss_pred HH--HHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 43 56788899999999987778999999998874 5689999999999999999988888887644588999999
Q ss_pred ccccCcce------ec-cCc-ccceEEEecCCCccc-CCCcceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 177 VSSICAID------FR-MDE-WGIDVALTGSQKALS-LPTGMGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 177 a~~~~~~~------~~-~~~-~~~di~~~s~~K~l~-g~~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
++...... .. ... ....+++.|.+|.++ .+.++|++++ ++++.+.+.....
T Consensus 199 ~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~------------------- 259 (371)
T PRK05166 199 AYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT------------------- 259 (371)
T ss_pred cHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc-------------------
Confidence 98643310 01 111 123588899999985 4445799776 5666665543210
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHH
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRA 326 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 326 (401)
.++.+.....++.+++. ....+++.++.++++++.+.+.|++.|+.+... .+.++|+.++ .+..++.+.|
T Consensus 260 -~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p~-----~g~fl~~~~~--~~~~~l~~~l 329 (371)
T PRK05166 260 -PFNVNGAAQAAALAALD--DEEHLAKGVALALAERERLKKELAEMGYRIAPS-----RANFLFFDAR--RPASAVAEAL 329 (371)
T ss_pred -CCCCCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHCcCeeCCC-----cCCEEEEeCC--CCHHHHHHHH
Confidence 11233332223333332 122366677888888899999999887764321 2346777764 2577899999
Q ss_pred HhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 327 WQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 327 ~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.++ ||.+.++......+++||++. +.++.++++++|+.++
T Consensus 330 ~~~-gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 330 LRQ-GVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred HHC-CeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 876 999999865444678999765 4677788888887654
No 98
>PRK07683 aminotransferase A; Validated
Probab=99.97 E-value=2.1e-27 Score=225.97 Aligned_cols=320 Identities=14% Similarity=0.100 Sum_probs=221.8
Q ss_pred ChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhc----C--CCCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK----T--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g----~--~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
.++.+.+++.+.... ...+.......++|+.++++++ . +++.++++++|+++|+..++.+++++||+|+++.+
T Consensus 42 ~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p 121 (387)
T PRK07683 42 TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAP 121 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCC
Confidence 345666666663322 1223223445677778877763 3 23325999999999999999888999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~ 168 (401)
.|+.+. ..++..|++++.++.+.+ ..+|.+++++.+.+ +++++++++++||||.+++ +++|.++|++ +
T Consensus 122 ~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~--~ 193 (387)
T PRK07683 122 IYPGYE--PIIRLCGAKPVFIDTRSTGFRLTAEALENAITE----KTRCVVLPYPSNPTGVTLSKEELQDIADVLKD--K 193 (387)
T ss_pred CccchH--HHHHHcCCEEEEeecCcccCCCCHHHHHHhcCc----CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--c
Confidence 766543 456778999999998653 45688899998863 5689999999999999987 6778888888 9
Q ss_pred CcEEEEecccccCcce------ecc-CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 169 PALFLVDGVSSICAID------FRM-DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~------~~~-~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
|++||+|+++...... ... +..+..+++.|.+|.++ .+.++|++++++++.+++.... .
T Consensus 194 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~-------------~ 260 (387)
T PRK07683 194 NIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVH-------------Q 260 (387)
T ss_pred CeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHH-------------H
Confidence 9999999998754211 111 11234688999999985 3345799999998877665321 0
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC-CCCH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-HINS 319 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~ 319 (401)
+. ...++.....++...++.- ...+++.++++.++++.+.+.|.+.|+.+..+ ..+.+++..++. +.+.
T Consensus 261 ~~-----~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 330 (387)
T PRK07683 261 YN-----VTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP----TGAFYLFPSIGHFTMSS 330 (387)
T ss_pred hc-----cCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CeeEEEEEecccCCCCH
Confidence 10 0112232222333333211 11255677788888999999998877665543 234567777754 4567
Q ss_pred HHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 320 SEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 320 ~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+++..|.++.||.+.+|.. ...++++||++.. +++++++++++|.+++++
T Consensus 331 ~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 331 FDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred HHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 78887766666999999853 2235789998764 789999999999998864
No 99
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.97 E-value=1.9e-27 Score=228.69 Aligned_cols=332 Identities=16% Similarity=0.143 Sum_probs=232.0
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCCCC-----------CccHHHHHHH-HHHHHHHHhcCCCCceEEecCChhHHHHH
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYR-----------SPAVPALTKT-LLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~~~~~~~~~~-l~~~la~~~g~~~~~~i~~~~g~t~a~~~ 75 (401)
.+.+++.+++.++++.|++++.......+ +....+..++ +++.+++++|.+... +++ ++||+|+..
T Consensus 25 ~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~-i~~-~sgt~al~~ 102 (416)
T PRK00011 25 EEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYAN-VQP-HSGSQANAA 102 (416)
T ss_pred hcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCcee-eec-CCchHHHHH
Confidence 35677888888899999999976432111 1112223333 566899999997643 444 567899999
Q ss_pred HHhccCCCCCeEEEEcCCcchHH--H-HHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcc
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLL--W-IDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~--~-~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG 151 (401)
++.+++++||+|+++.+.|.++. + .......|++++.++.+. ++.+|++++++.+++ +++++++++++ .+|
T Consensus 103 ~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~~~~~--~~~ 177 (416)
T PRK00011 103 VYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE---HKPKLIIAGAS--AYS 177 (416)
T ss_pred HHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh---cCCCEEEECCC--cCC
Confidence 99899999999999999876542 1 111234567888888764 467899999999974 25688887643 356
Q ss_pred cccchHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEec-HHHHHHhccC
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTA 225 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~ 225 (401)
...|+++|.++|++ +|+++|+|++|+.|.. +.... ++|++++|+||++.|+.| |+++.+ +++.+++...
T Consensus 178 ~~~~~~~I~~la~~--~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~ 252 (416)
T PRK00011 178 RPIDFKRFREIADE--VGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSA 252 (416)
T ss_pred CccCHHHHHHHHHH--cCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHH
Confidence 67799999999999 9999999999976643 22233 689999999999976665 777775 6777666432
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (401)
... + ..+++....++++..++......++++..++..++++++++.|+++|+++.. .. ..
T Consensus 253 ~~~---------------~--~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~--~~ 312 (416)
T PRK00011 253 VFP---------------G--IQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVS-GG--TD 312 (416)
T ss_pred hCc---------------c--ccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeee-cC--CC
Confidence 110 1 1223444455555555555545567888999999999999999998887653 11 12
Q ss_pred ceeEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCC------CCCcEEEEeecc----cCCHHHHHHHHHHHHHHHHh
Q 015729 306 DTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNK------VAGKVFRIGHLG----HLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 306 ~~~~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~------~~~~~~Ri~~~~----~~~~~di~~~~~~i~~~l~~ 372 (401)
..++++.+++ +.+..++.+.|.++ ||.+..++.+ .....+|++... .++++|+++++++|+++++.
T Consensus 313 ~~~~~i~~~~~~~~~~~~~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 313 NHLVLVDLRSKGLTGKEAEAALEEA-NITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CeEEEEeCcccCCCHHHHHHHHHHc-CcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 3567777742 34667888888655 9998754322 123469996533 46799999999999998874
No 100
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.97 E-value=1.3e-27 Score=228.06 Aligned_cols=316 Identities=12% Similarity=0.024 Sum_probs=220.2
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh----c----CCCCceEEecCChhHHHHHHHhccCCCCCe--
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----K----TTSGTPFLIPTTGTGAWESALTNTLSPGDR-- 86 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----g----~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~-- 86 (401)
+..+++.+.+++.+.......+.......++|+.+++++ | .++.+++++|+|+++|+..++.+++++||+
T Consensus 39 ~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~ 118 (393)
T TIGR03538 39 KHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPL 118 (393)
T ss_pred CCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcce
Confidence 445678888888875433223333344567788887777 3 333345999999999999999999999986
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHH
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRK 161 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~ 161 (401)
|+++.|.|+.+. ..++..|++++.++++++ +.+|++++++++.+ +++++++++|+||||.+++ +++|.+
T Consensus 119 vlv~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~----~~k~i~l~~p~NPtG~~~s~~~~~~l~~ 192 (393)
T TIGR03538 119 VVMPNPFYQIYE--GAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR----RCQLLFVCSPGNPTGAVLSLDTLKKLIE 192 (393)
T ss_pred EEecCCCCcchH--HHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh----cceEEEEeCCCCCcCcccCHHHHHHHHH
Confidence 888888766543 457889999999998644 46789999988863 5699999999999999998 566788
Q ss_pred HhhhcCCCcEEEEecccccCcce-----ec----cC-----cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCC
Q 015729 162 LLDEYRHPALFLVDGVSSICAID-----FR----MD-----EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAK 226 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~-----~~----~~-----~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~ 226 (401)
+|++ +|++||+|++|...... .. .. .....+++.|.+|.++ .+.++|+++.++++++++....
T Consensus 193 ~a~~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~ 270 (393)
T TIGR03538 193 LADQ--YGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYR 270 (393)
T ss_pred HHHH--CCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHHH
Confidence 8888 99999999998643211 00 00 1223588999999652 3445799999988877664321
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
. +...+.+.....++.+++. ....+++.+++++++.+.+.+.|++. +.+..+ ..+
T Consensus 271 ~------------------~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p----~gg 325 (393)
T TIGR03538 271 T------------------YHGCAMPIPTQLASIAAWN--DEQHVRENRALYREKFAAVLEILGQV-LDLELP----DAG 325 (393)
T ss_pred H------------------hhccCcCHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHHHHHhh-CcccCC----Cee
Confidence 0 0011233333333333332 12236677788888888888888774 333222 345
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--------~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
.++|+++| .+..++++.|.+++||.+.+|.... ..+++||++.. +++++++++++|++.
T Consensus 326 ~f~~~~~~--~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 326 FYLWPKVP--GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRSF 392 (393)
T ss_pred EEEEEECC--CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHHh
Confidence 68889886 3567888888766799999995321 23689998876 789999999999764
No 101
>PRK09148 aminotransferase; Validated
Probab=99.97 E-value=1e-27 Score=229.16 Aligned_cols=327 Identities=13% Similarity=0.105 Sum_probs=223.9
Q ss_pred CChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
++++.+++++.+.... ...|.......++|+.+++++ |.+ +++++++|+|+++|+..++..++.+||+|+++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~ 122 (405)
T PRK09148 43 PTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCP 122 (405)
T ss_pred CCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEc
Confidence 4466677776653211 112332344567788888776 432 33259999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcC
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYR 167 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~ 167 (401)
+|+|+.+. ..++..|++++.++.+.++. +++.+++.++... .+++++++++|+||||.+++. ++|.++|++
T Consensus 123 ~P~y~~~~--~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~-- 196 (405)
T PRK09148 123 NPSYPIHA--FGFIMAGGVIRSVPAEPDEE-FFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKK-- 196 (405)
T ss_pred CCCCcccH--HHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 99877654 44567899999999876543 3556666665322 467999999999999999986 567888888
Q ss_pred CCcEEEEecccccCcc---e----eccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 168 HPALFLVDGVSSICAI---D----FRMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~---~----~~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|++||+|++|..... + ..... .+..+++.|.+|.++ .+.++|+++.++++++.+...+.
T Consensus 197 ~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~----------- 265 (405)
T PRK09148 197 HDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKS----------- 265 (405)
T ss_pred cCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHH-----------
Confidence 9999999999874321 1 11111 134567899999984 23447999999988776653210
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC--
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH-- 316 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~-- 316 (401)
+...+++.....++..+++. .+..+++.++++.++++.+.+.|++.|+.+..+ ..+.++|+.+|..
T Consensus 266 -------~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p----~~g~f~~~~l~~~~~ 333 (405)
T PRK09148 266 -------YLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPP----AASMFAWAPIPEAFR 333 (405)
T ss_pred -------HhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC----CeeEEEEEECCCccC
Confidence 00112333222333333321 122356778888999999999999887665433 3456788888753
Q ss_pred -CCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCC
Q 015729 317 -INSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYP 376 (401)
Q Consensus 317 -~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~ 376 (401)
.+..+++..|.++.||.+.+|... ...+++||++. .+.+++++++++|.+.+++++..
T Consensus 334 ~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~~ 394 (405)
T PRK09148 334 HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADET 394 (405)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 245688888776569999998432 22478999875 47899999999999998766543
No 102
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.97 E-value=1.8e-27 Score=234.00 Aligned_cols=323 Identities=13% Similarity=0.063 Sum_probs=218.5
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh------cCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF------KTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+++++.+.......|.......++|+.|++++ +.++ ++|++++|+++++..++.+++++||+|++++|
T Consensus 162 ~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~-~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P 240 (517)
T PRK13355 162 RTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDV-DDIYTGNGVSELINLSMSALLDDGDEVLIPSP 240 (517)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCCh-hHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 4477888888764433333444456789999999988 3443 45999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|+.+. ..++..|++++.++++++ +.+|+++++++++. +++++++++|+||||.+++ +++|+++|++
T Consensus 241 ~y~~y~--~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~-- 312 (517)
T PRK13355 241 DYPLWT--ACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS----RTKAIVIINPNNPTGALYPREVLQQIVDIARE-- 312 (517)
T ss_pred CCcCHH--HHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc----CceEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 877654 567788999999988653 57899999998863 6799999999999999998 6778889999
Q ss_pred CCcEEEEecccccCcce----eccCcc--c-ceEEEecCCCccc-CCCcceEEEec--HHHHHHhccCCCCccccchHHH
Q 015729 168 HPALFLVDGVSSICAID----FRMDEW--G-IDVALTGSQKALS-LPTGMGIVCAS--PKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~----~~~~~~--~-~di~~~s~~K~l~-g~~g~G~l~~~--~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
+|++||+|++|...... ...... + ..+++.|.+|.++ ++..+||++.+ ++..+.+...
T Consensus 313 ~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~------------ 380 (517)
T PRK13355 313 HQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEG------------ 380 (517)
T ss_pred cCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHH------------
Confidence 99999999998643211 111111 1 2345688999873 23347999854 4332211100
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHH--HhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIF--EEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
......- ..+.+.....++.+++.... ...++. ..+..+.++++.+.|+++ |+++..++ .+.+++++++
T Consensus 381 l~~~~~~---~~~~~~~~q~a~~~aL~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~~g~~~~~p~----g~fy~~~~l~ 452 (517)
T PRK13355 381 LNMLANM---RLCSNVPAQSIVQTALGGHQSVKDYLVP-GGRVYEQRELVYNALNAIPGISAVKPK----AAFYIFPKID 452 (517)
T ss_pred HHHHhcC---cCCcChHHHHHHHHHhcCCccHHHHHHH-HHHHHHHHHHHHHHHhcCCCcccCCCC----eeeEEEeecC
Confidence 0000000 11233333344455553110 111222 234455678888999887 87766543 4456777775
Q ss_pred CC----CCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 315 SH----INSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 315 ~~----~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+ .+..+++..++++.||.+.+|... ...+++||++. .+++++++++++|.+.++.
T Consensus 453 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 453 VKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred cccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 32 135566666555669999998543 24578999884 4899999999999998864
No 103
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.96 E-value=5.3e-27 Score=224.33 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=221.2
Q ss_pred ChHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHh----cCC-CCc-eEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 20 IPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KTT-SGT-PFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 20 ~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~----g~~-~~~-~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.++.+++++.+... ....+.......++|+.+++++ |.+ .++ ++++|+|+++|+..++.+++.+||+|++++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~ 126 (403)
T PRK08636 47 TPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPD 126 (403)
T ss_pred CCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcC
Confidence 34555665554222 1223333344557777777776 543 333 599999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHH----HHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHH
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDV----LASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKL 162 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~----le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l 162 (401)
|+|+.+. ..++..|++++.++.+ .++.+|++. +++++++.. .+++++++++|+||||.+++. ++|.++
T Consensus 127 P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~-~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~ 203 (403)
T PRK08636 127 PAYPIHS--QAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESS-PKPKYVVVNFPHNPTTATVEKSFYERLVAL 203 (403)
T ss_pred CCCcchH--HHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhcc-CCceEEEEeCCCCCCCccCCHHHHHHHHHH
Confidence 9877654 4577789999999875 335788774 466565432 468999999999999999985 567888
Q ss_pred hhhcCCCcEEEEecccccCcce-------eccCcc-cceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 163 LDEYRHPALFLVDGVSSICAID-------FRMDEW-GIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~-------~~~~~~-~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
|++ ++++||+|+++...... ...+.. ...+++.|.+|.++ .+.++|+++.++++.+.+.....
T Consensus 204 a~~--~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~------ 275 (403)
T PRK08636 204 AKK--ERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKS------ 275 (403)
T ss_pred HHH--cCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHHHH------
Confidence 888 99999999998743211 111111 23466789999993 44567999999998776653210
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
....+ ++++... ++..+++.. ...+++.++.+.++++.+.+.|++.|+++..+ ..+.++|+.+
T Consensus 276 ------~~~~~-----~~~~~q~-~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p----~~g~~~~~~l 338 (403)
T PRK08636 276 ------WLDYG-----MFTPIQV-AATIALDGD-QSCVEEIRETYRKRRDVLIESFANAGWELQKP----RASMFVWAKI 338 (403)
T ss_pred ------Hhccc-----CChHHHH-HHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CcceEEEEEC
Confidence 00011 1233222 222333211 22356677888888899999998877665443 3456888998
Q ss_pred CCC---CCHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 314 PSH---INSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 314 ~~~---~~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
|+. .+..++...+.+++||.+.+|.. ...++++||++. .+++++++++++|++.++.
T Consensus 339 ~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 339 PEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 753 34678888776666999999843 223578999875 4899999999999999865
No 104
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.96 E-value=4.2e-28 Score=217.32 Aligned_cols=299 Identities=17% Similarity=0.145 Sum_probs=213.9
Q ss_pred CCccHHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEE
Q 015729 36 RSPAVPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVV 113 (401)
Q Consensus 36 ~~~~~~~~~~~l~~~la~~~g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v 113 (401)
++++..++...|++++++++|.. +.++|++|.|+.+|+..++++++++||+|++.+|-+.++. ......|.+.+.|
T Consensus 67 ~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~--~~~~maG~tpv~v 144 (420)
T KOG0257|consen 67 RGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYI--PQVVMAGGTPVFV 144 (420)
T ss_pred ccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhh--hHHhhcCCcceee
Confidence 46778889999999999988864 4456999999999999999999999999999999666554 5577789999999
Q ss_pred eCC--------CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCc
Q 015729 114 ESD--------WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICA 182 (401)
Q Consensus 114 ~~~--------~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~ 182 (401)
+.. .++.+|++++|.++. +|+|+|+++.||||||.+.+ +++|+++|++ ||+++|.|++|....
T Consensus 145 ~~~~~~g~~~s~~~~~D~~~le~~~t----~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k--~~~lvisDevYe~~v 218 (420)
T KOG0257|consen 145 PLKPKEGNVSSSDWTLDPEELESKIT----EKTKAIILNTPHNPTGKVFSREELERIAELCKK--HGLLVISDEVYEWLV 218 (420)
T ss_pred ccccccccccCccccCChHHHHhhcc----CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHH--CCEEEEEhhHhHHHh
Confidence 876 356789999999998 47799999999999999986 7889999999 999999999986432
Q ss_pred ce--------eccCcccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCc
Q 015729 183 ID--------FRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (401)
Q Consensus 183 ~~--------~~~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (401)
.. ....-+...+.++|.+|++ +..| +||++..+.++..+.+... ++ ..+.+
T Consensus 219 ~d~~~h~r~aslPgm~ertitvgS~gKtf-~~TGWrlGW~igp~~L~~~~~~vh~------------~~------~~~~~ 279 (420)
T KOG0257|consen 219 YDGNKHIRIASLPGMYERTITVGSFGKTF-GVTGWRLGWAIGPKHLYSALFPVHQ------------NF------VFTCP 279 (420)
T ss_pred hCCCcceeeecCCchhheEEEecccccee-eeeeeeeeeeechHHhhhhHHHHhh------------cc------ccccC
Confidence 11 1122344678899999998 4665 7999996666554443211 11 11122
Q ss_pred HHHHHHHHHHHHHHH----Hhc---HHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC--------CC-
Q 015729 253 IQLLYGLRAALDLIF----EEG---LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP--------SH- 316 (401)
Q Consensus 253 ~~~~~a~~~al~~~~----~~g---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--------~~- 316 (401)
.....|..+|+..-. .+| .....+.++++++.+.+.|.++|+++..+++. .+++..++ .+
T Consensus 280 Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~ga----yyl~adfs~~~~~~~~~~~ 355 (420)
T KOG0257|consen 280 TPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGA----YYLWADFSLAKSWPFFEEI 355 (420)
T ss_pred cHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCc----eEEEEeccccccCCcchhh
Confidence 211222333332211 122 34478889999999999999999999887533 45666664 11
Q ss_pred ---CCHHHHHHHHHhhCCeEEccCCCCCC-------CcEEEEeecccCCHHHHHHHHHHHH
Q 015729 317 ---INSSEIVRRAWQRYNLSLGLGLNKVA-------GKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 317 ---~~~~~l~~~L~~~~~i~v~~g~~~~~-------~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
.+...++++|.++.|+.+.|+..... ++.+|++++- +++-++.++++++
T Consensus 356 ~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k--~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 356 LEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK--ADETLRKAIERLK 414 (420)
T ss_pred ccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh--hHHHHHHHHHHHh
Confidence 13446778888777888777744222 2345664443 5666666666665
No 105
>PLN02187 rooty/superroot1
Probab=99.96 E-value=2.8e-27 Score=228.67 Aligned_cols=328 Identities=12% Similarity=0.016 Sum_probs=222.1
Q ss_pred CChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~----~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
..++.+.+++.+.... ...+.......++|+.++++++. + .++++++|+|+++|+..++.++++|||+|++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~ 162 (462)
T PLN02187 83 RTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPR 162 (462)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeC
Confidence 4455666665553221 12233344567889999988852 1 345699999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhc
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~ 166 (401)
|+|+.+. ..++..|++++.+++. .++.+|++++++++++ +++++++++|+||||.+++ +++|.++|++
T Consensus 163 P~y~~y~--~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~----~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~- 235 (462)
T PLN02187 163 PGFPHYD--ARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE----NTVAMVVINPNNPCGNVYSHDHLKKVAETARK- 235 (462)
T ss_pred CCCccHH--HHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC----CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHH-
Confidence 9877653 4577889999999874 3467899999998864 5689999999999999997 6678888888
Q ss_pred CCCcEEEEecccccCcc---ee-c---cCcccceEEEecCCCcccCCC--cceEEEec-HH-HH---HHhccCCCCcccc
Q 015729 167 RHPALFLVDGVSSICAI---DF-R---MDEWGIDVALTGSQKALSLPT--GMGIVCAS-PK-AL---EASKTAKSVRVFF 232 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~---~~-~---~~~~~~di~~~s~~K~l~g~~--g~G~l~~~-~~-~~---~~~~~~~~~~~~~ 232 (401)
+|++||+|++|..... ++ . +......+++.|.+|.++ .+ ++||+++. ++ .. +.+...+
T Consensus 236 -~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~-~pGlRiG~~v~~~p~~~~~~~~~~~~~~------ 307 (462)
T PLN02187 236 -LGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWV-VPGWKIGWIALNDPEGVFETTKVLQSIK------ 307 (462)
T ss_pred -CCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcC-CccceeEEEEecCchhHHHHHHHHHHHH------
Confidence 9999999999875321 11 1 111123678899999974 44 46999974 33 21 2222110
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 312 (401)
..+ .+...++.....++.++++......+++.++.++++++.+.+.|++++.......+ ..+.+++++
T Consensus 308 ------~~~----~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P--~gg~fl~~~ 375 (462)
T PLN02187 308 ------QNL----DVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKP--ESCTYLLTK 375 (462)
T ss_pred ------Hhc----cccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCC--CEeEEEEee
Confidence 000 00112344444445555432112236778888999999999999987432211111 234577776
Q ss_pred cCC----CC-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 313 VPS----HI-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 313 ~~~----~~-~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
++. ++ +..+++..+..+.||.+.+|......+++||++.. .++.+++++++|.+++++...
T Consensus 376 l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~--~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 376 LELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV--EAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred cChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhhh
Confidence 642 22 45577666655569999999554446899998764 689999999999999986643
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.96 E-value=1.9e-27 Score=223.73 Aligned_cols=321 Identities=18% Similarity=0.113 Sum_probs=229.1
Q ss_pred CCCcCChHHHHHHHcc--CcCCCCCccHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 15 PGPVHIPDQVIRAMNR--NNEDYRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 15 ~~p~~~~~~v~~a~~~--~~~~~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
..|....+.+++++.. .......+.......++++.++++++.. ....+++++|+++++..++.++.++||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~v 86 (350)
T cd00609 7 EPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEV 86 (350)
T ss_pred CCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEE
Confidence 3455555555555543 2222223333455567777777777654 23458999999999999999888999999
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCCh--HHHHHHHhccCCCCceEEEEEecCCCcccccchHHH---HHH
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL--DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKV---RKL 162 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~--~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i---~~l 162 (401)
+++.++|+++. ..++..|.+++.++.+.++..+. +.+++..+ ++++++++++++||+|.+.|++++ .++
T Consensus 87 l~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~ 160 (350)
T cd00609 87 LVPDPTYPGYE--AAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT----PKTKLLYLNNPNNPTGAVLSEEELEELAEL 160 (350)
T ss_pred EEcCCCchhHH--HHHHHCCCEEEEEecccccCCccCHHHHHhhcC----ccceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 99999888764 56778899999999987766554 55555443 468999999999999999986655 589
Q ss_pred hhhcCCCcEEEEecccccCcce-------eccCcccceEEEecCCCccc-CCCcceEEEecH-HHHHHhccCCCCccccc
Q 015729 163 LDEYRHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALS-LPTGMGIVCASP-KALEASKTAKSVRVFFD 233 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~-------~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~ 233 (401)
|++ +|+++|+|++|+.+... ......+.|+++.|.+|+++ ++.++|++++++ ++.+.+....
T Consensus 161 ~~~--~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~------- 231 (350)
T cd00609 161 AKK--HGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL------- 231 (350)
T ss_pred HHh--CCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHH-------
Confidence 999 99999999998764321 22345678999999999996 456689999999 6666654321
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
. ...++++...+.++..+++... .++++..+++.++++++.+.|++.+...... . .++.++++.+
T Consensus 232 ------~-----~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~-~~g~~~~~~~ 296 (350)
T cd00609 232 ------P-----YTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVK--P-SGGFFLWLDL 296 (350)
T ss_pred ------H-----hcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccC--C-CccEEEEEec
Confidence 0 1123466666666666666544 4577888899999999999999975443211 1 3456777888
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
+...+...+.+.|. +.||.+.++.... .+.++|+++... ++|+++++++|++
T Consensus 297 ~~~~~~~~~~~~l~-~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~~ 350 (350)
T cd00609 297 PEGDDEEFLERLLL-EAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLAE 350 (350)
T ss_pred CCCChHHHHHHHHH-hCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhhC
Confidence 55434555656665 5599998774432 567899988875 9999999999863
No 107
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.96 E-value=5.7e-27 Score=223.41 Aligned_cols=297 Identities=18% Similarity=0.197 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
..+...++++.+++++|.+. .++++ +|++++..++.+++++||.|++..+.|++.. ......|++++.++
T Consensus 76 ~~~l~~~l~~~l~~~~g~~~--~i~~~-sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~--~~~~~~g~~~~~~~----- 145 (385)
T TIGR01825 76 TLRLHEELEEKLAKFKKTEA--ALVFQ-SGFNTNQGVLSALLRKGDIVLSDELNHASII--DGLRLTKATKKIYK----- 145 (385)
T ss_pred CcHHHHHHHHHHHHHhCCCc--EEEEC-cHHHHHHHHHHHhCCCCCEEEEEccccHHHH--HHHHhcCCceEEeC-----
Confidence 35678899999999988643 35555 4577888888888999999999888766653 23445677776553
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcce---------eccCcc
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEW 190 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~ 190 (401)
.+|++++++.+.+...++++++++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+... ++.. .
T Consensus 146 ~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~ 222 (385)
T TIGR01825 146 HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAER--YGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-D 222 (385)
T ss_pred CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHH--hCCEEEEECcccccCcCCCCCccHhhcCCC-c
Confidence 3688999998875433467899999889999999999999999999 99999999999765432 2222 4
Q ss_pred cceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc
Q 015729 191 GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG 270 (401)
Q Consensus 191 ~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g 270 (401)
+.|+++.|.+|+++ ..| |+++.+++..+.+...... +. +....+...++++.++++.+.+.
T Consensus 223 ~~~i~~~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~~a~~~al~~~~~~- 283 (385)
T TIGR01825 223 KVDIQVGTLSKAIG-VVG-GYAAGHKELIEYLKNRARP------------FL----FSTAQPPAVVAALAAAVDELQRS- 283 (385)
T ss_pred CCcEEEEeccHHhh-cCC-CEEecCHHHHHHHHHhCcc------------cc----ccCCCCHHHHHHHHHHHHHHhcC-
Confidence 67899999999994 555 8999888887766432110 00 01123445566777777765443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEE
Q 015729 271 LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFR 347 (401)
Q Consensus 271 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~R 347 (401)
.+..++..++.+++.+.|+++|+++..+. .+ ++.+.++...+..++++.|.++ ||.+.+...+ ....++|
T Consensus 284 -~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~-~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iR 356 (385)
T TIGR01825 284 -PELMERLWDNTRFFKAGLGKLGYDTGGSE----TP-ITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIR 356 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCCCCCC----CC-EEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEE
Confidence 34677778889999999998888876532 22 4445553322456899999887 9988644222 1235799
Q ss_pred EeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 348 IGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 348 i~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+++..+++++|+++++++|+++++++|+
T Consensus 357 i~~~~~~~~e~i~~~~~~l~~~~~~~~~ 384 (385)
T TIGR01825 357 NIPTAEHTKDDLDQALDAYEKVGKELGL 384 (385)
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 9888889999999999999999987654
No 108
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.96 E-value=4.1e-27 Score=225.16 Aligned_cols=322 Identities=12% Similarity=0.027 Sum_probs=225.7
Q ss_pred CChHHHHHHHccCcCCC--CCccHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNEDY--RSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
++++.+++++.+..... ..+.......++|+.++++++.. .++++++++|+|+|+..++.++.++||+|+++.
T Consensus 48 ~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~ 127 (403)
T TIGR01265 48 RTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPR 127 (403)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeC
Confidence 56677888877643221 12333455678999999999852 345699999999999999999889999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhc
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~ 166 (401)
++|... ...++..|++++.++.+. ++.+|++++++.+.+ +++++++++|+||||.+++ +++|.++|++
T Consensus 128 p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~- 200 (403)
T TIGR01265 128 PGFPLY--DTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE----KTVAIVVINPSNPCGSVFSRDHLQKIAEVARK- 200 (403)
T ss_pred CCchhH--HHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc----CccEEEEecCCCCCCCCCCHHHHHHHHHHHHH-
Confidence 976643 356788899999988754 356899999998864 5689999999999999986 7788889999
Q ss_pred CCCcEEEEecccccCcce----e---ccCcccceEEEecCCCccc-CCCcceEEEecH--HH-----HHHhccCCCCccc
Q 015729 167 RHPALFLVDGVSSICAID----F---RMDEWGIDVALTGSQKALS-LPTGMGIVCASP--KA-----LEASKTAKSVRVF 231 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~----~---~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~--~~-----~~~~~~~~~~~~~ 231 (401)
+|++||+|+++...... . ........+++.|.+|.++ .+.++|++++.+ +. .+.+..
T Consensus 201 -~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~------- 272 (403)
T TIGR01265 201 -LGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN------- 272 (403)
T ss_pred -CCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHH-------
Confidence 99999999998743211 1 1111123578889999863 234579998742 22 222211
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEE
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 310 (401)
+... ...++.....++..+++......+++.++++.++++.+.+.|+.. |+.+..+ ..+.++|
T Consensus 273 ---------~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~~g~f~~ 336 (403)
T TIGR01265 273 ---------LLQR---ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP----EGAMYLM 336 (403)
T ss_pred ---------Hhhh---hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----CceeEEE
Confidence 1000 112344333444444432112236677888888889999999886 6654333 2446888
Q ss_pred EEcCCC-----CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 311 VIVPSH-----INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 311 ~~~~~~-----~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+++|++ .+..++...|.++.||.+.+|......+++||++.. .++.+++++++|.+.+++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 337 VKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV--PESMLEEACSRIKEFCERH 402 (403)
T ss_pred EeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence 888643 267788888766669999999654456889998764 6889999999999988754
No 109
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=3.6e-27 Score=228.78 Aligned_cols=339 Identities=15% Similarity=0.121 Sum_probs=234.5
Q ss_pred CCcCChHHHHHHHccCc--CCC--CC-----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHH-HHHH--Hh-ccCC
Q 015729 16 GPVHIPDQVIRAMNRNN--EDY--RS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGA-WESA--LT-NTLS 82 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~--~~~--~~-----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a-~~~~--~~-~~~~ 82 (401)
+....++.+.+++.+.. ... ++ .+..+...++++.+++++|.+.. .+..++|+.+ +..+ +. ...+
T Consensus 78 ~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l~~~r~~~~~ 155 (481)
T PRK04366 78 CTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGLLMIRAYHEA 155 (481)
T ss_pred cCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHHHHHHHHhhc
Confidence 45667788888887752 111 21 12346678899999999999742 3343444433 3322 22 3456
Q ss_pred CCC----eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc-cchH
Q 015729 83 PGD----RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT-NNLS 157 (401)
Q Consensus 83 ~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~-~~l~ 157 (401)
+|| +|+++.+.|+++. ..++..|++++.++.+.++.+|++++++++++ +++++++++|+ ++|.+ .|++
T Consensus 156 ~Gd~~~~~Vlv~~~~hp~~~--~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~----~t~~V~v~~Pn-~tG~~~~dl~ 228 (481)
T PRK04366 156 RGDTKRTEVIVPDSAHGTNP--ASAAMAGFKVVEIPSNEDGLVDLEALKAAVGE----DTAALMLTNPN-TLGLFERNIL 228 (481)
T ss_pred cCcCCCCEEEEcCCccHhHH--HHHHHcCCEEEEeecCCCCCcCHHHHHhhccc----CCeEEEEeCCC-CccccchHHH
Confidence 666 8999999887665 45678999999999987788999999999874 56899998876 99987 4899
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcc-eeccCcccceEEEecCCCcccCC-----CcceEEEecHHHHHHhccCCC----
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAI-DFRMDEWGIDVALTGSQKALSLP-----TGMGIVCASPKALEASKTAKS---- 227 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~di~~~s~~K~l~g~-----~g~G~l~~~~~~~~~~~~~~~---- 227 (401)
+|.++|++ +|+++++|+++..+.. ..+..++|+|++++++||+|++| +|+|++++++++.+.+.....
T Consensus 229 eI~~~a~~--~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g 306 (481)
T PRK04366 229 EIAEIVHE--AGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDG 306 (481)
T ss_pred HHHHHHHH--cCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccC
Confidence 99999999 9999999999975422 23566789999999999999754 556899999998887754321
Q ss_pred CccccchH-HH-HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 015729 228 VRVFFDWK-DY-IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (401)
Q Consensus 228 ~~~~~~~~-~~-~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (401)
..+.+.+. .+ .+++.. ++.+...+.++...+..+..+|++++.++..++++++++.|.++ +++... .. ..
T Consensus 307 ~~~~l~~~r~~~i~r~~a-----~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~-~~-~~ 378 (481)
T PRK04366 307 DRYRLDYDRPKSIGRVRA-----FYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYD-RP-CM 378 (481)
T ss_pred CceeecccccccCCCccc-----ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCC-CC-ee
Confidence 11111111 10 112222 23445555555555566666678888888999999999999986 333321 11 11
Q ss_pred ceeEEEEcC----CCCCHHHHHHHHHhhCCeEEccCCCCC-CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 306 DTVTAVIVP----SHINSSEIVRRAWQRYNLSLGLGLNKV-AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 306 ~~~~~~~~~----~~~~~~~l~~~L~~~~~i~v~~g~~~~-~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
..+.+..+ .+.+..++.++|.++ ||.+.....+. ..+.+|+++..++|++|||+++++++++.+++..
T Consensus 379 -~~~~~~~~~~~~~g~~~~~v~~~L~~~-Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 379 -HEFVLSGKKLKETGVRTLDIAKRLLDY-GFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred -EEEEEECccccccCCCHHHHHHHHHHC-CccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 12223321 245788999999876 98865333322 2567999999899999999999999999876543
No 110
>PRK07337 aminotransferase; Validated
Probab=99.96 E-value=2.4e-27 Score=225.88 Aligned_cols=329 Identities=11% Similarity=0.017 Sum_probs=222.9
Q ss_pred cccccCCCc-CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCC
Q 015729 10 NHLFVPGPV-HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLS 82 (401)
Q Consensus 10 ~~~~~~~p~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~ 82 (401)
..+..+-|. +.++.+.+++.+.... ...+.......++++.+++++ |.. .++++++|+|+++|+..++.++++
T Consensus 33 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~ 112 (388)
T PRK07337 33 IHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVE 112 (388)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcC
Confidence 334444333 4567777777664321 122222334567778887776 432 335599999999999999988999
Q ss_pred CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hH
Q 015729 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LS 157 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~ 157 (401)
+||+|++++|+|++.. ..++..|++++.++.+.+ +.+|++++++.+++ +++++++++|+||||.+++ ++
T Consensus 113 ~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~ 186 (388)
T PRK07337 113 RGDEVLMPDPSYPCNR--HFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE----RTRGVLLASPSNPTGTSIAPDELR 186 (388)
T ss_pred CCCEEEEeCCCchhhH--HHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc----cceEEEEECCCCCCCcCcCHHHHH
Confidence 9999999999877654 456678999999998653 47899999998863 5689999999999999997 56
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcc---eeccCcccc-eEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAI---DFRMDEWGI-DVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~~~~-di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+|.++|++ +++++|+|+++..... +......+. .+++.|.+|.++ .+.++|++++++++.+++.....
T Consensus 187 ~i~~~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~----- 259 (388)
T PRK07337 187 RIVEAVRA--RGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQ----- 259 (388)
T ss_pred HHHHHHHH--CCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHH-----
Confidence 67788888 9999999999763321 111111222 356789999884 23347999999888776653210
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCCccCCceeEEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNC-TQKEEWFSDTVTAV 311 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~ 311 (401)
. +..+.+.....++..+++.-....+++.+++++++++.+.+.|++.|+.+. .+ ..+.++|+
T Consensus 260 -------~------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p----~~g~f~~~ 322 (388)
T PRK07337 260 -------N------LFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMP----DGAFYVYA 322 (388)
T ss_pred -------H------hccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC----CeeEEEEE
Confidence 0 011133332233333332100012456677788888889999988876542 22 34568888
Q ss_pred EcCC-----CCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 312 IVPS-----HINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 312 ~~~~-----~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+++. ..+..+++..|.++.||.+.+|.... ..+++||++.. +++++++++++|.+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 323 DCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGKLF 387 (388)
T ss_pred ecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence 8863 24677888887666699999984432 24689998775 6889999999998764
No 111
>PRK07550 hypothetical protein; Provisional
Probab=99.96 E-value=3.1e-27 Score=224.96 Aligned_cols=319 Identities=15% Similarity=0.066 Sum_probs=222.0
Q ss_pred cCChHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 18 VHIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.+.++.+.+++.+... ....+.......++|+.++++++ .. .++++++++|+++|+..++.+++++||+|+++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~ 120 (386)
T PRK07550 41 YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILP 120 (386)
T ss_pred CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEc
Confidence 3446667777665321 11122222345566666666664 22 33569999999999999988889999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
.|+|+.+. ..++..|++++.++.++ ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 121 ~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~----~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~ 194 (386)
T PRK07550 121 LPWYFNHK--MWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP----RTRAIALVTPNNPTGVVYPPELLHELYDLARR 194 (386)
T ss_pred CCCCcchH--HHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc----cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHH
Confidence 99776553 45678999999999874 345789999999974 5689999999999999997 6778999999
Q ss_pred cCCCcEEEEecccccCcc----eecc---Cc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 166 YRHPALFLVDGVSSICAI----DFRM---DE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~----~~~~---~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+|++||+|++++.... +... .. ....+++.|.+|.++ .+.++|+++++++.++.+.....
T Consensus 195 --~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~--------- 263 (386)
T PRK07550 195 --HGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMD--------- 263 (386)
T ss_pred --cCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHh---------
Confidence 9999999999864321 1111 11 123577899999985 33457999999888766543210
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
. ...+++.....++..+++.+. ...++.++++.++++.+.+.|.+. ++.+.. ..+.++|+.+|.
T Consensus 264 ------~---~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~g~~~~~~~~~~ 328 (386)
T PRK07550 264 ------T---VAICAPRIGQIAVAWGLPNLA-DWRAGNRAEIARRRDAFRAVFARLPGWELLA-----SGAYFAYVRHPF 328 (386)
T ss_pred ------h---cccCCCcHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHHhCCCceeCC-----CceEEEEecCCC
Confidence 0 011234444444445554322 234566777888888899999885 554322 234678888876
Q ss_pred -CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 316 -HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 316 -~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+.++.+++..|.+++||.+.+|... ..++++||++. ..+++++++++++|.+.
T Consensus 329 ~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 329 PDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred CCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence 6788999999876679999998432 23568999875 46799999999999764
No 112
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.5e-27 Score=225.29 Aligned_cols=307 Identities=13% Similarity=0.098 Sum_probs=215.6
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
|...++.+++++.+.......+.. ....++++.+++++|.++.+ +++ ++|+++++..++.+++++||+|+++.|.|+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~~-i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~ 122 (361)
T PRK00950 45 PLGPSPKAVEAIEKELSKIHRYPE-PDAPELREALSKYTGVPVEN-IIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFS 122 (361)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHhCCCHHH-EEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChH
Confidence 556677788777664322211211 12378999999999987654 777 778888898888888899999999998655
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
.+ ...++..|++++.++.+.++.+|++++++.++. +++++++++|+||||.+.|.+++.++|++ +|+++|+|
T Consensus 123 ~~--~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~~~~p~nptG~~~~~~~l~~l~~~--~~~~li~D 194 (361)
T PRK00950 123 YY--EISAKAHGAKPVYAKREEDFSLDVDSVLNAITE----KTKVIFLCTPNNPTGNLIPEEDIRKILES--TDALVFVD 194 (361)
T ss_pred HH--HHHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc----CCCEEEEeCCCCCCCCCcCHHHHHHHHHH--CCcEEEEE
Confidence 43 345778899999999777778999999998863 56899999999999999999999999999 89999999
Q ss_pred cccccCcce-e-c-cCcccceEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCC
Q 015729 176 GVSSICAID-F-R-MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (401)
Q Consensus 176 ~a~~~~~~~-~-~-~~~~~~di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 250 (401)
++|...... . . .......+++.|.+|.++ .+| +|++++++++.+.+..... .++
T Consensus 195 e~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~--------------------~~~ 253 (361)
T PRK00950 195 EAYVEFAEYDYTPLALEYDNLIIGRTFSKVFG-LAGLRIGYGFVPEWLIDYYMRAKT--------------------PFS 253 (361)
T ss_pred CchhhhCccchHHHHHhcCCEEEEEeehHhhc-CchhhcchhcCCHHHHHHHHHhcC--------------------CCC
Confidence 998643210 0 1 112234578889999884 444 7999999988776653211 111
Q ss_pred CcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh
Q 015729 251 PSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (401)
Q Consensus 251 ~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (401)
.+.....+ +...+...+ +++..++++++++++.+.|. +.+... ...++++.+ ++.+..++++.|.++
T Consensus 254 ~~~~~~~~---a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~---~~~~~~-----~~~~i~~~~-~~~~~~~~~~~l~~~ 321 (361)
T PRK00950 254 LTRLSQAA---AIAALSDKEYIEKSIEHGIKSREYLYNELP---FKVYPS-----EANFVLVDV-TPMTAKEFCEELLKR 321 (361)
T ss_pred CCHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHhhcC---eeECCC-----cceEEEEEC-CCCCHHHHHHHHHHC
Confidence 33333333 333333322 45555556666655555553 333221 234777888 556788999999865
Q ss_pred CCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 330 YNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 330 ~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
||.++++... ..++++|+++. +.+++++++++|++++
T Consensus 322 -gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 322 -GVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred -CEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 9999987432 23468999865 6789999999998875
No 113
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=7.8e-27 Score=222.56 Aligned_cols=312 Identities=18% Similarity=0.140 Sum_probs=222.1
Q ss_pred ChHHHHHHHccCcCC----C----CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 20 IPDQVIRAMNRNNED----Y----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~----~----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.++.+++++.+.... . ..........++++.++++++.+ + .+++++|++++..++..++++||+|++..
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~--~-~i~~~~g~~~~~~~l~~~~~~gd~V~~~~ 130 (385)
T PRK05958 54 RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAE--R-ALLFSSGYAANLAVLTALAGKGDLIVSDK 130 (385)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC--c-EEEECcHHHHHHHHHHHhCCCCCEEEEeC
Confidence 456677766653321 1 11123566889999999999853 3 55566778888877778889999999998
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcE
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPAL 171 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ 171 (401)
+.|++.. ..++..|++++.++.. |++++++.++... .+++++++.+++|++|...++++|.++|++ +|++
T Consensus 131 ~~~~~~~--~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~-~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~--~~~~ 200 (385)
T PRK05958 131 LNHASLI--DGARLSRARVRRYPHN-----DVDALEALLAKWR-AGRALIVTESVFSMDGDLAPLAELVALARR--HGAW 200 (385)
T ss_pred ccCHHHH--HHHHhcCCceEEeCCC-----CHHHHHHHHHhcc-CCCeEEEEEecccCCCCcCCHHHHHHHHHH--hCCE
Confidence 8766554 3456678888887643 7899999887531 135677777888999999999999999999 9999
Q ss_pred EEEecccccCccee---------ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhh
Q 015729 172 FLVDGVSSICAIDF---------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 172 li~D~a~~~~~~~~---------~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
+|+|++|+.+.... .......++++.|.+|+++ +.| |+++.++++.+.+...... +
T Consensus 201 li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G-g~~~~~~~~~~~~~~~~~~------------~- 265 (385)
T PRK05958 201 LLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-SSG-AAVLGSETLIDYLINRARP------------F- 265 (385)
T ss_pred EEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-cCC-cEEEcCHHHHHHHHHhCcc------------c-
Confidence 99999997653321 1222234588899999994 666 8888888876655321100 0
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHH
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (401)
.+..+++...++++.++++.+... ++..+++.++.+++.+.|+++++++..+ .+.++++.+++..+..++
T Consensus 266 ---~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 335 (385)
T PRK05958 266 ---IFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMDS-----QSAIQPLIVGDNERALAL 335 (385)
T ss_pred ---eecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC-----CCCEEEEEeCCHHHHHHH
Confidence 011234555666777788766543 5678889999999999999888775432 234667777544456789
Q ss_pred HHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 323 VRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.+.|.++ ||.+.++... ...+++||++..+++++|+++++++|++++
T Consensus 336 ~~~l~~~-gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 336 AAALQEQ-GFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHC-CceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 9999866 9999864221 123689999988889999999999998753
No 114
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.3e-26 Score=221.80 Aligned_cols=336 Identities=15% Similarity=0.128 Sum_probs=232.2
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCC---C-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDY---R-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~---~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
+..+..+.||-......+-+++.+++.+..... + .....+...++++++++++|.+. .+++++|++|+..++.
T Consensus 47 ~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~---~~~~~SG~~An~~ai~ 123 (406)
T PRK13393 47 VTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA---ALLFTSGYVSNWAALS 123 (406)
T ss_pred EEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc---EEEeCCcHHHHHHHHH
Confidence 345566677766665556666666666543211 1 11224567899999999998643 6667777889998887
Q ss_pred ccCC--CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 79 NTLS--PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 79 ~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
.+.. +||.|+.....|.+.. ......|.+++.++.+ |++.+++.++....+++++|++++++|++|.+.|+
T Consensus 124 ~l~~~~~g~~I~~~~~~H~s~~--~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l 196 (406)
T PRK13393 124 TLGSRLPGCVILSDELNHASMI--EGIRHSRAEKRIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPI 196 (406)
T ss_pred HhhcCCCCCEEEEccchhHHHH--HHHHHcCCeEEEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCH
Confidence 6554 6776555555444433 2334567777766533 78888888764322357899999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcc-ee-----ccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAI-DF-----RMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~-~~-----~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~ 228 (401)
++|.++|++ +|+++|+|++|+.|.+ +. ... ...+|+++.+.+|.++ ..| |++++++++.+.+.....
T Consensus 197 ~~i~~l~~~--~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~G-G~~~~~~~~~~~l~~~~~- 271 (406)
T PRK13393 197 AEICDVAEK--HGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMG-GYITGSAALCDFIRSFAS- 271 (406)
T ss_pred HHHHHHHHH--cCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccC-ceeeCCHHHHHHHHHhCc-
Confidence 999999999 9999999999985542 11 000 1236888889999985 555 888888887766543211
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
+..+.++.++..++++.++++.+.+.+ ..+++.+++.+++++.|+++|+++..+ .. .+
T Consensus 272 ---------------~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~-~i 329 (406)
T PRK13393 272 ---------------GFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPN----PS-HI 329 (406)
T ss_pred ---------------CceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCC----CC-Ce
Confidence 111133456666778888888776543 234667888999999998888765532 22 24
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.+.+++..+..++.+.|++++||.+.++..+. ....+||++..++|++|+|+++++|++++++++.
T Consensus 330 ~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~~~ 399 (406)
T PRK13393 330 VPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARLGL 399 (406)
T ss_pred EEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhcCc
Confidence 455553322456888888876699998764322 2367999999999999999999999999987654
No 115
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=3.4e-27 Score=227.26 Aligned_cols=301 Identities=19% Similarity=0.146 Sum_probs=225.1
Q ss_pred ccHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEE
Q 015729 38 PAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDV 112 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 112 (401)
+.......++|+.+++++. .. .+++|++|+|+++|+.+++..+++|||.|++.+|+|++.. ...+..|++++.
T Consensus 128 y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~--~~~~~~g~~~~~ 205 (459)
T COG1167 128 YGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL--QALEALGARVIP 205 (459)
T ss_pred CCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHH--HHHHHcCCcEEe
Confidence 3334556677777777664 32 3457999999999999999999999999999999988764 678889999999
Q ss_pred EeCCCCCCCChHHHHHHHhccCCCCceEEEEE-ecCCCcccccchH---HHHHHhhhcCCCcEEEEecccccCcce----
Q 015729 113 VESDWGEGAKLDVLASKLAADTAHTIKAICIV-HNETATGVTNNLS---KVRKLLDEYRHPALFLVDGVSSICAID---- 184 (401)
Q Consensus 113 v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~-~~~n~tG~~~~l~---~i~~l~~~~~~~~~li~D~a~~~~~~~---- 184 (401)
|++|.+| +|+++||+.+.+ .++|+++++ ..+||||.+++.+ +|.++|++ +|++||+|+.++.....
T Consensus 206 vp~d~~G-~~~e~le~~~~~---~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~--~~~~IIEDD~y~el~~~~~p~ 279 (459)
T COG1167 206 VPVDEDG-IDPEALEEALAQ---WKPKAVYVTPTFQNPTGVTMSLERRKALLALAEK--YDVLIIEDDYYGELRYDGPPP 279 (459)
T ss_pred cCCCCCC-CCHHHHHHHHhh---cCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHH--cCCeEEeeCcchhhhcCCCCC
Confidence 9999664 899999999986 367888766 4579999999865 59999999 99999999997743221
Q ss_pred ---eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHH
Q 015729 185 ---FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRA 261 (401)
Q Consensus 185 ---~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~ 261 (401)
...+..+..+++.|.+|+++.+.++||+++++++++++...+. .... .++... +.+
T Consensus 280 ~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~-------------~~~~-----~~s~~~---Q~~ 338 (459)
T COG1167 280 PPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQ-------------AADL-----GPSSLS---QAA 338 (459)
T ss_pred CChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHHH-------------HhcC-----CCChHH---HHH
Confidence 2233457889999999999877789999999998887764321 1111 133322 222
Q ss_pred HHHHHHH----hcHHHHHHHHHHHHHHHHHHHHHc-C--CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEE
Q 015729 262 ALDLIFE----EGLENVIERHRRLGKATRLAVEAW-G--LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL 334 (401)
Q Consensus 262 al~~~~~----~g~~~~~~~~~~~~~~l~~~L~~~-g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v 334 (401)
....+.. ..+.+.++.+.+..+.+.+.|.+. + +.+..+ ..+.++|+++|++.+..++...+.++ |+.+
T Consensus 339 la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p----~gG~flwl~l~~~~~~~~l~~~a~~~-gv~i 413 (459)
T COG1167 339 LAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRP----EGGLFLWLELPEGIDARELLAAALEK-GVVV 413 (459)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC----CceEEEEEEcCCCCCHHHHHHHHHHC-CCEE
Confidence 2233331 125677777888888888888885 2 233332 35789999999999999999999877 8888
Q ss_pred cc-CCCCC----CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 335 GL-GLNKV----AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 335 ~~-g~~~~----~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+ |.... ..+.+|+++.. .+++++++.+.+|.+++++.
T Consensus 414 ~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 414 TPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred EcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Confidence 77 63322 23479997665 77999999999999988764
No 116
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=5e-27 Score=223.33 Aligned_cols=317 Identities=13% Similarity=0.069 Sum_probs=222.4
Q ss_pred CChHHHHHHHccCcCC---CCC--ccHHHHHHHHHHHHHHHhcCCC--CceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNED---YRS--PAVPALTKTLLEDIKKIFKTTS--GTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~---~~~--~~~~~~~~~l~~~la~~~g~~~--~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
+.++.+.+++.+.... .+. .+..++.+.+.+.+.+.+|.+. ...+++++|+++|+..++.+++.+||+|+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~ 122 (386)
T PRK09082 43 DGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFD 122 (386)
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeC
Confidence 3456677776663211 111 1234455556666666667642 23599999999999999988899999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+.|.++. ..++..|++++.++.+. ++.+|++++++.++. +++++++++++||||.+++ +++|.++|++
T Consensus 123 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~-- 194 (386)
T PRK09082 123 PSYDSYA--PAIELAGGRAVRVALQPPDFRVDWQRFAAAISP----RTRLIILNTPHNPSGTVWSAADMRALWQLIAG-- 194 (386)
T ss_pred CCchhhH--HHHHHcCCEEEEEecCcccccCCHHHHHHhcCc----cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 9877653 45677899999999864 457899999998863 5799999999999999864 6778999999
Q ss_pred CCcEEEEecccccCcce-------eccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 168 HPALFLVDGVSSICAID-------FRMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~-------~~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|+++|+|++|...... ..... ....+++.|.+|.++ .+.++|++++++++++.+.....
T Consensus 195 ~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~----------- 263 (386)
T PRK09082 195 TDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQ----------- 263 (386)
T ss_pred CCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHh-----------
Confidence 99999999998643211 11111 245688899999984 23347999999988776654210
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC--C
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--H 316 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--~ 316 (401)
+ ...+.+.....++...++. .+..+++.++.++++++.+.+.|++.++++..+ .++.++|+.+|+ +
T Consensus 264 --~-----~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~----~g~~~~~~~~~~~~~ 331 (386)
T PRK09082 264 --Y-----NTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANSRFKLLPC----EGTYFQLVDYSAISD 331 (386)
T ss_pred --h-----hcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----CeeEEEEEeccccCC
Confidence 0 0112333333333333321 122356677888899999999999877776543 345678888863 5
Q ss_pred CCHHHHHHHHHhhCCeEEccCCC----CCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 317 INSSEIVRRAWQRYNLSLGLGLN----KVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~~g~~----~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+..++++.|.+++||.+.+|.. +...+++|+++.. +++++++.+++|++
T Consensus 332 ~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 332 LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 67889999887677999999842 2234689998764 78899999998865
No 117
>PRK08363 alanine aminotransferase; Validated
Probab=99.96 E-value=5.1e-27 Score=224.32 Aligned_cols=324 Identities=14% Similarity=0.087 Sum_probs=219.8
Q ss_pred CChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~----~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
++++.+.+++.+.... ...+.......++|+.++++++. . .++++++++|+++|+..++.+++++||+|+++++
T Consensus 46 ~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p 125 (398)
T PRK08363 46 QPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGP 125 (398)
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 5677777777663321 11233345566888888888742 2 3345999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEE-eCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVV-ESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
.|.++. ..++..|++++.+ +.++ ++.+|++++++.+.+ +++++++++|+||||.+++ +++|.++|++
T Consensus 126 ~y~~~~--~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~-- 197 (398)
T PRK08363 126 SYPPYT--GLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE----KTKAIAVINPNNPTGALYEKKTLKEILDIAGE-- 197 (398)
T ss_pred CCcchH--HHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc----ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 877654 4567788888887 4443 346889999988863 5699999999999999997 7788888999
Q ss_pred CCcEEEEecccccCcce------eccCcccceEEEecCCCccc-CCCcceEEEe--cHHHHHHhccCCCCccccchHHHH
Q 015729 168 HPALFLVDGVSSICAID------FRMDEWGIDVALTGSQKALS-LPTGMGIVCA--SPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~------~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~--~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|+++|+|++|...... .........+++.|.+|+++ .+.++|++++ +++..+.+....
T Consensus 198 ~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~------------ 265 (398)
T PRK08363 198 HDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAI------------ 265 (398)
T ss_pred cCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHH------------
Confidence 99999999998643211 11111223577889999863 3345799997 555555443210
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC-
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
..+... ..+.+.....++.+++... ...+++.+++++++++.+.+.|+++ ++.+..+ ..+.++|+.+|..
T Consensus 266 ~~~~~~---~~~~s~~~q~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~~~~~~~l~~~~ 337 (398)
T PRK08363 266 DKLARI---RLCPNTPAQFAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEIPGISTTKP----QGAFYIFPRIEEGP 337 (398)
T ss_pred HHHhcc---cccCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCC----CeEEEEEEEeccCC
Confidence 000000 0123333333334444321 2236677888889999999999887 6665433 2455666677642
Q ss_pred -CCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 317 -INSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 317 -~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+..+++..++++.||.+.+|... ...+++|+++. .+++++++++++|++++++
T Consensus 338 ~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 338 WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 245566656545569999998542 22468999875 4789999999999998865
No 118
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.96 E-value=5.6e-27 Score=224.25 Aligned_cols=323 Identities=12% Similarity=0.036 Sum_probs=224.4
Q ss_pred cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCC----CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT----SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~----~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.++++.+.+++.+.... ...+.......++++.++++++.. .++++++++|+++|+..++.+++++||+|+++.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~ 126 (401)
T TIGR01264 47 LPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPR 126 (401)
T ss_pred CCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeC
Confidence 46778888887764322 122333445678899999988731 234599999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhc
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~ 166 (401)
|+|..+ ...++..|++++.++++. ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 127 P~y~~~--~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~- 199 (401)
T TIGR01264 127 PGFPLY--ETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE----KTAALIVNNPSNPCGSVFSRQHLEEILAVAER- 199 (401)
T ss_pred CCChhH--HHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc----CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH-
Confidence 976544 356788999999988754 357899999998864 4689999999999999986 6678888888
Q ss_pred CCCcEEEEecccccCcce----e---ccCcccceEEEecCCCccc-CCCcceEEEecH------HHHHHhccCCCCcccc
Q 015729 167 RHPALFLVDGVSSICAID----F---RMDEWGIDVALTGSQKALS-LPTGMGIVCASP------KALEASKTAKSVRVFF 232 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~----~---~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~------~~~~~~~~~~~~~~~~ 232 (401)
+|++||+|+++...... . ........+++.|.+|.++ .+.++|++++.+ +.++.+..
T Consensus 200 -~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~-------- 270 (401)
T TIGR01264 200 -QCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVK-------- 270 (401)
T ss_pred -CCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHH--------
Confidence 99999999998643211 1 1111122578899999753 233469999864 22222211
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 311 (401)
+.. . ..+++.....++..++....+..+++.+++++++++.+.+.|+++ |+.+..+ ..+.++|+
T Consensus 271 --------~~~-~--~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~~g~f~~~ 335 (401)
T TIGR01264 271 --------LSQ-R--ILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP----SGAMYMMV 335 (401)
T ss_pred --------Hhh-c--cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC----CeeeEEEE
Confidence 100 0 112333333334444432112336777888889999999999987 6554333 34567888
Q ss_pred EcCC-----CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 312 IVPS-----HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 312 ~~~~-----~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+++. ..+..++...|.+++||.+.+|......+++||++.. +++++++++++|.++++++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 336 GIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV--PVVMMEEACSRIQEFCERH 400 (401)
T ss_pred EecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHhcc
Confidence 8642 2356788888876669999998544346799998764 6899999999999988754
No 119
>PLN03032 serine decarboxylase; Provisional
Probab=99.96 E-value=5.4e-27 Score=218.04 Aligned_cols=326 Identities=12% Similarity=0.087 Sum_probs=241.0
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCC--------C-CCccHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhHHHHHHH
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNED--------Y-RSPAVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTGAWESAL 77 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~--------~-~~~~~~~~~~~l~~~la~~~g~~~~~-~i~~~~g~t~a~~~~~ 77 (401)
.+.++-.|.-......+++++...... + .+....+..+++++.+++++|.++++ +.+||+|||+|+..++
T Consensus 23 ~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al 102 (374)
T PLN03032 23 SSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGI 102 (374)
T ss_pred hhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHH
Confidence 345555555555555566665553321 1 12235678889999999999997654 2599999999999877
Q ss_pred hcc--CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 78 TNT--LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 78 ~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
.+. ..++..|+++..+|++.. +.++..|++++.|+++.++.+|+++|++++++++ .+|.+++++..+|.+|.+.|
T Consensus 103 ~~ar~~~~~~~vi~s~~~H~Sv~--kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~-~~~~lvv~tagtt~tG~idp 179 (374)
T PLN03032 103 LVGREVFPDGILYASRESHYSVF--KAARMYRMEAVKVPTLPSGEIDYDDLERALAKNR-DKPAILNVNIGTTVKGAVDD 179 (374)
T ss_pred HHHHHhCCCcEEEeCCCceeHHH--HHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcC-CCCEEEEEEecCcCCccCCC
Confidence 542 234567888888998875 6678889999999999999999999999998755 36788899999999999999
Q ss_pred hHHHHHHhhhcCCC-----cEEEEecccccCccee-------ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhc
Q 015729 156 LSKVRKLLDEYRHP-----ALFLVDGVSSICAIDF-------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK 223 (401)
Q Consensus 156 l~~i~~l~~~~~~~-----~~li~D~a~~~~~~~~-------~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~ 223 (401)
+++|.++|++ +| +|+++|+|++.+..++ ++. .++|.+++|+||+++.|.|+|+++++++..+.+.
T Consensus 180 i~eI~~i~~~--~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~ 256 (374)
T PLN03032 180 LDRILRILKE--LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALS 256 (374)
T ss_pred HHHHHHHHHH--hCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhc
Confidence 9999999999 64 6999999998877664 443 3699999999998866999999999988766543
Q ss_pred cCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCcc
Q 015729 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEW 303 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 303 (401)
.. ..|.... .....++.+....+.+++++..+..+|+.+..++..++++++.+.|++.++++....
T Consensus 257 ~~---~~Yl~~~--------d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p--- 322 (374)
T PLN03032 257 QN---VEYLNSR--------DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNE--- 322 (374)
T ss_pred cC---CcccCCC--------CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECC---
Confidence 21 1122111 112233455566788999999998889999999999999999999999888876532
Q ss_pred CCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 304 FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+. .+.|.-| ..+. +. + |..+.+ ..+.+|+.+...++++.+|++++.|++
T Consensus 323 ~~~-~V~f~~~---~~~~----~~-~-~w~l~~-----~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 323 LSS-TVVFERP---MDEA----FI-K-KWQLAC-----EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred Cce-EEEEcCC---CcHh----Hh-h-eeeecc-----cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 232 3445443 1122 22 2 433331 134899998888899999999988865
No 120
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.96 E-value=6.4e-27 Score=220.20 Aligned_cols=311 Identities=12% Similarity=0.082 Sum_probs=214.2
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.++++.+++++.+.......+.. ....++|+.++++++.+++ ++++++|+++++..++.++ .+|+ +++++|+|.
T Consensus 30 ~~~~~p~~~~~a~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~ 105 (356)
T PRK08056 30 NPLGMPVSLKRAIIDNLDCAERYPD-VEYRHLHQALARHHQVPAS-WILAGNGETESIFAVVSGL-KPRR-AMIVTPGFA 105 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhcccCcC-ccHHHHHHHHHHHhCcChh-hEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcH
Confidence 3567888899988764332222222 2378999999999998764 5999999999999888764 6775 677778655
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCCCCh-HHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcE
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEGAKL-DVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPAL 171 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~-~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ 171 (401)
.+ ...++..|++++.++.+.+..+++ +++++.+. ++++++++++|+||||.+.+ +++|.++|++ ++++
T Consensus 106 ~~--~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~----~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~--~~~~ 177 (356)
T PRK08056 106 EY--RRALQQVGCEIRRYSLREADGWQLTDAILEALT----PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKS--LNIA 177 (356)
T ss_pred HH--HHHHHHcCCeEEEEecccccCCCccHHHHHhcc----CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHh--cCCE
Confidence 43 356788999999999865433333 34555554 46799999999999999998 6778888888 9999
Q ss_pred EEEecccccCcce----e-ccCcccceEEEecCCCccc-CCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 172 FLVDGVSSICAID----F-RMDEWGIDVALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 172 li~D~a~~~~~~~----~-~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
||+|+++...... . .......++++.|.||+++ .+.++|+++++ ++..+.+.... .
T Consensus 178 ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~-----------------~ 240 (356)
T PRK08056 178 LILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQ-----------------M 240 (356)
T ss_pred EEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhC-----------------C
Confidence 9999997533211 0 1223346789999999996 34457999984 55655554321 0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
.++.+....+++..+++ .....++.+++++++++.+.+.|+++ ++.+..+ ...+++++++. +..+++
T Consensus 241 ---~~~~~~~~~~~a~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~~ 308 (356)
T PRK08056 241 ---PWSINAFAALAGEVILQ--DRAYQQATWQWLAEEGARFYQALCALPLLTVWPG-----RANYLFLRCER--PDIDLQ 308 (356)
T ss_pred ---CCchhHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-----CCcEEEEEcCC--ChHHHH
Confidence 12233333333333332 11124556778889999999999887 6655432 23467787753 457888
Q ss_pred HHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 324 RRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.|.++ ||.++++... ..++++||++. +.++.+.++++|+++++
T Consensus 309 ~~l~~~-gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 309 RALLTQ-RILIRSCANYPGLDSRYYRVAIR---SAAENERLLAALRNVLT 354 (356)
T ss_pred HHHHHC-CeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence 988865 9999988543 22468999754 67889999999988764
No 121
>PLN02822 serine palmitoyltransferase
Probab=99.96 E-value=1.7e-26 Score=223.63 Aligned_cols=335 Identities=13% Similarity=0.114 Sum_probs=236.1
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCCC----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
|.++.+..|+...++..+-+++.+++.++..... .+...+...+++++|+++++.+. .+++++|++ ++..++.
T Consensus 111 ~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~-a~~sai~ 187 (481)
T PLN02822 111 VVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLS-TIFSVIP 187 (481)
T ss_pred EEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHH-HHHHHHH
Confidence 3445555666666666666677777766543221 23456788999999999999764 377776655 6788888
Q ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC-----CCCc-eEEEEEecCCCccc
Q 015729 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT-----AHTI-KAICIVHNETATGV 152 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~-----~~~~-~~i~~~~~~n~tG~ 152 (401)
++.++||.|++....|++.. ...+..+.+++.++.+ |.+.++..+++.. .+++ ++|+++.+++++|.
T Consensus 188 a~~~~gd~Ii~d~~~H~s~~--~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~ 260 (481)
T PLN02822 188 AFCKKGDIIVADEGVHWGIQ--NGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQ 260 (481)
T ss_pred HhCCCCCEEEEeCCccHHHH--HHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCC
Confidence 99999999987766555442 3455567888888765 4556665554311 0234 68899899999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcce---------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK 223 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~ 223 (401)
+.|+++|.++|++ ||+++|+|++|++|.+. +++....+|+++.|.+|.+ |..| |+++++++.++.+.
T Consensus 261 i~~L~~i~~l~~k--~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~G-G~i~g~~~ii~~~~ 336 (481)
T PLN02822 261 IAPLDEIVRLKEK--YRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATEG-GFCTGSARVVDHQR 336 (481)
T ss_pred ccCHHHHHHHHHH--cCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhCC-eEEEcCHHHHHHHH
Confidence 9999999999999 99999999999966532 1222225799999999999 4666 99999999887765
Q ss_pred cCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
.... +..+..+.++..++++.++++.+.. ..+.+++++++.+++++.|++. |+.+..+.
T Consensus 337 ~~~~----------------~~~fsa~lPp~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~-- 396 (481)
T PLN02822 337 LSSS----------------GYVFSASLPPYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIGSNT-- 396 (481)
T ss_pred hcCC----------------ceeeccccCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccCCCC--
Confidence 3211 1112223445555666678876654 2568899999999999999986 87765432
Q ss_pred cCCceeEEEEcCCCC-----C---HHHHHHHHHhhCCeEEccCCCCC-----CCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 303 WFSDTVTAVIVPSHI-----N---SSEIVRRAWQRYNLSLGLGLNKV-----AGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~-----~---~~~l~~~L~~~~~i~v~~g~~~~-----~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
...++.+.+++.. + ..++++.|+++.||.+.++..+. .+..+|+++...+|++||++++++|+++
T Consensus 397 --~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~ 474 (481)
T PLN02822 397 --LSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRV 474 (481)
T ss_pred --CCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 2346666664310 1 25788888855599998763321 1346999888889999999999999998
Q ss_pred HHhc
Q 015729 370 LKDV 373 (401)
Q Consensus 370 l~~~ 373 (401)
++++
T Consensus 475 ~~~~ 478 (481)
T PLN02822 475 AASV 478 (481)
T ss_pred HHHH
Confidence 8764
No 122
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=6.8e-27 Score=223.67 Aligned_cols=331 Identities=15% Similarity=0.068 Sum_probs=219.6
Q ss_pred cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.+.++.+.+++.+.... ...|.......++|+.++++++ .+ .++++++|+|+++|+..++.+++++||+|+++
T Consensus 48 ~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~ 127 (409)
T PLN00143 48 FRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLP 127 (409)
T ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEc
Confidence 47777787877663322 1223333455678888888873 22 33569999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
.|+|+.+. ..++..|++++.++.+ .++.+|++++++++++ +++.+++++|+||||.+++ +++|.++|++
T Consensus 128 ~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~ 201 (409)
T PLN00143 128 RPGFPDVE--TYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE----NTIAMVIINPGNPCGSVYSYEHLNKIAETARK 201 (409)
T ss_pred CCCCcCHH--HHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc----CCEEEEEECCCCCCCCccCHHHHHHHHHHHHH
Confidence 99877654 5577789999999874 3456899999998763 5689999999999999998 5567788888
Q ss_pred cCCCcEEEEecccccCcc---e---e-ccCcccceEEEecCCCccc-CCCcceEEEec-HH-HHHHhccCCCCccccchH
Q 015729 166 YRHPALFLVDGVSSICAI---D---F-RMDEWGIDVALTGSQKALS-LPTGMGIVCAS-PK-ALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~---~---~-~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~-~~-~~~~~~~~~~~~~~~~~~ 235 (401)
++++||+|++|..... + . ........+++.|.+|.++ .+.++|+++++ ++ ..+.+.. .
T Consensus 202 --~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~----------~ 269 (409)
T PLN00143 202 --LGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI----------A 269 (409)
T ss_pred --cCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH----------H
Confidence 9999999999874321 1 0 1122224588899999863 23456999983 42 2211100 0
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
......... ... ++.....++.++++......+++.+++++++.+.+.+.|++++.......+ ..+.++|+++|.
T Consensus 270 ~~~~~~~~~--~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p--~gg~f~w~~l~~ 344 (409)
T PLN00143 270 DSIKKALNP--APF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKA--EGAFFALVKLNL 344 (409)
T ss_pred HHHHHHHhc--cCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC--CeeEEEEEecch
Confidence 000000000 011 222222333333321111236677888888888888888876432211111 245688888863
Q ss_pred ----CC-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 316 ----HI-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 316 ----~~-~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+. +..++...+..+.||.+.+|......+++||++.. +++++++++++|++.+++.
T Consensus 345 ~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~--~~~~l~~al~rl~~~l~~~ 405 (409)
T PLN00143 345 LLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV--EQSSLEDGLGRLKSFCGRH 405 (409)
T ss_pred hhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHHh
Confidence 22 45677766655569999999654456789998764 6899999999999988754
No 123
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=226.54 Aligned_cols=327 Identities=10% Similarity=0.024 Sum_probs=221.4
Q ss_pred CCcCChHHHHHHHccCcC----CCCCccHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHHHHHhccC-CCCC
Q 015729 16 GPVHIPDQVIRAMNRNNE----DYRSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWESALTNTL-SPGD 85 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~-~~~~i~~~~g~t~a~~~~~~~~~-~~gd 85 (401)
++...|..+++++.+... ....|.......++|+.++++++. + .+++|++|+|+++|+..++.+++ ++||
T Consensus 85 ~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD 164 (481)
T PTZ00377 85 VSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSD 164 (481)
T ss_pred ccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCC
Confidence 444456677776653211 122244445677888888888752 2 34569999999999999999988 7999
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccC--CCCceEEEEEecCCCcccccc---hHH
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNN---LSK 158 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~~~---l~~ 158 (401)
.|+++.|.|+++. ..++..|++++.++++++ +.+|++++++.+++.. ..+++++++++|+||||.+++ +++
T Consensus 165 ~Vlv~~P~y~~y~--~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~ 242 (481)
T PTZ00377 165 GVMIPIPQYPLYS--AAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEE 242 (481)
T ss_pred EEEECCCCchhHH--HHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHH
Confidence 9999999877654 567788999999998754 4689999999986411 126799999999999999998 677
Q ss_pred HHHHhhhcCCCcEEEEecccccCcc----ee-c-------cCcc---c-ceEEEecCCCcccCC--CcceEEEe---cHH
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAI----DF-R-------MDEW---G-IDVALTGSQKALSLP--TGMGIVCA---SPK 217 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~----~~-~-------~~~~---~-~di~~~s~~K~l~g~--~g~G~l~~---~~~ 217 (401)
|+++|++ +|++||+|++|..... ++ . .... + ..+++.|.+|.+.+. .++||+++ +++
T Consensus 243 i~~~a~~--~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~ 320 (481)
T PTZ00377 243 IIKFCYE--KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPE 320 (481)
T ss_pred HHHHHHH--CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHH
Confidence 8889999 9999999999864221 11 1 1111 1 246788999986443 44699986 787
Q ss_pred HHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH----------HHHhcHHHHHHHHHHHHHHHHH
Q 015729 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL----------IFEEGLENVIERHRRLGKATRL 287 (401)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~----------~~~~g~~~~~~~~~~~~~~l~~ 287 (401)
+.+++..... . ..+++.....++.++++. +.+ .+++..++++++++.+.+
T Consensus 321 li~~l~~~~~-----------------~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~rr~~l~~ 380 (481)
T PTZ00377 321 VREQIYKLAS-----------------I--NLCSNVVGQLMTGLMCNPPREGDASYPLYKR-ERDAIFTSLKRRAELLTD 380 (481)
T ss_pred HHHHHHHHhh-----------------e--ecCCChHHHHHHHHHhCCCCCCcccHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 7776654211 0 112334334444444421 111 133444556788888999
Q ss_pred HHHHc-CCccccCCCccCCceeEEEEc--CCCC----------CHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeec
Q 015729 288 AVEAW-GLKNCTQKEEWFSDTVTAVIV--PSHI----------NSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHL 351 (401)
Q Consensus 288 ~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~----------~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~ 351 (401)
.|+++ |+.+..++ .+.++|+.+ |.+. +..+++..+.++.||.+.+|.... ..+++|+++.
T Consensus 381 ~L~~~~g~~~~~p~----gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~ 456 (481)
T PTZ00377 381 ELNKIEGVSCQPVE----GAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL 456 (481)
T ss_pred HHhcCCCcEeecCC----eeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC
Confidence 99887 77766542 345666554 2221 133455666666699999995432 2358999876
Q ss_pred ccCCHHHHHHHHHHHHHHHHh
Q 015729 352 GHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 352 ~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+++++++++++|++++++
T Consensus 457 --~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 457 --PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred --CCHHHHHHHHHHHHHHHHH
Confidence 5788999999999998765
No 124
>PLN02656 tyrosine transaminase
Probab=99.96 E-value=8e-27 Score=223.33 Aligned_cols=332 Identities=14% Similarity=0.062 Sum_probs=226.0
Q ss_pred CCcccccCC-C-----cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHH
Q 015729 8 GKNHLFVPG-P-----VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWE 74 (401)
Q Consensus 8 ~~~~~~~~~-p-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~----~-~~~~i~~~~g~t~a~~ 74 (401)
.+.+.++.| | .++++.+++++.+.... ...|.......++++.++++++. . .++++++++|+++|+.
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 110 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAID 110 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHH
Confidence 355566644 4 36678888887663322 12333334556788888888753 1 2345999999999999
Q ss_pred HHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 75 SALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 75 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
.++.+++++||+|++++|.|+.+. ..++..|++++.++++. ++.+|++++++.+++ +++++++++|+||||.
T Consensus 111 ~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~P~NPtG~ 184 (409)
T PLN02656 111 VALSMLARPGANILLPRPGFPIYE--LCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ----NTVALVIINPGNPCGN 184 (409)
T ss_pred HHHHHHhCCCCeEEEeCCCCCcHH--HHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc----CceEEEEECCCCCCCC
Confidence 999888999999999999876543 44566899999999853 356899999998864 4689999999999999
Q ss_pred ccc---hHHHHHHhhhcCCCcEEEEecccccCcc------ee-ccCcccceEEEecCCCccc-CCCcceEEEec------
Q 015729 153 TNN---LSKVRKLLDEYRHPALFLVDGVSSICAI------DF-RMDEWGIDVALTGSQKALS-LPTGMGIVCAS------ 215 (401)
Q Consensus 153 ~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~------~~-~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~------ 215 (401)
+++ +++|.++|++ +|++||+|++|..... +. ........+++.|.+|.++ .+.++|++++.
T Consensus 185 ~~s~~~~~~i~~~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~ 262 (409)
T PLN02656 185 VYSYQHLKKIAETAEK--LKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSF 262 (409)
T ss_pred CCCHHHHHHHHHHHHH--cCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCccccc
Confidence 975 6778888988 9999999999874321 11 1122234688899999863 23456999983
Q ss_pred --HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 216 --PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
+++.+++.... .. ...++.....++..+++...+..+++.+++++++++.+.+.|+++
T Consensus 263 ~~~~~~~~~~~~~-------------~~------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~ 323 (409)
T PLN02656 263 RDPKIVERIKKYF-------------DI------LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIP 323 (409)
T ss_pred ccHHHHHHHHHHH-------------hh------hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 45555443210 00 011344334444444432112236677888888889999999886
Q ss_pred CCccc-cCCCccCCceeEEEEcCCC----C-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 293 GLKNC-TQKEEWFSDTVTAVIVPSH----I-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 293 g~~~~-~~~~~~~~~~~~~~~~~~~----~-~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
++... .+ ..+.++|++++.. . +..++...+..+.||.+.+|......+++||++.. +++++++++++|
T Consensus 324 ~~~~~~~p----~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~--~~e~l~eal~rl 397 (409)
T PLN02656 324 CITCPHKP----EGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA--DPSSLEEALGRI 397 (409)
T ss_pred CCcCCcCC----CeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC--CHHHHHHHHHHH
Confidence 33221 22 3456788887521 1 34455544444559999999554456799998875 789999999999
Q ss_pred HHHHHh
Q 015729 367 EMILKD 372 (401)
Q Consensus 367 ~~~l~~ 372 (401)
++++..
T Consensus 398 ~~~~~~ 403 (409)
T PLN02656 398 KSFYLR 403 (409)
T ss_pred HHHHHH
Confidence 998864
No 125
>PRK09265 aminotransferase AlaT; Validated
Probab=99.96 E-value=1.4e-26 Score=221.72 Aligned_cols=323 Identities=15% Similarity=0.087 Sum_probs=212.7
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh------cCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF------KTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+.+++.+.......|.......++++.+++++ +.++ +++++++|+++++..++.+++++||+|++++|
T Consensus 49 ~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p 127 (404)
T PRK09265 49 EAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDV-DDIYIGNGVSELIVMAMQALLNNGDEVLVPAP 127 (404)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCc-ccEEEeCChHHHHHHHHHHhCCCCCEEEEeCC
Confidence 4677777777664322223333344568999999988 4444 45999999999999999889999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
+|+... ..++..|++++.++++. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 128 ~y~~~~--~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~-- 199 (404)
T PRK09265 128 DYPLWT--AAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP----RTKAIVIINPNNPTGAVYSKELLEEIVEIARQ-- 199 (404)
T ss_pred CCcChH--HHHHHcCCEEEEEecccccCCCCCHHHHHHhccc----cceEEEEECCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 877543 45667788888887654 346899999998863 5699999999999999998 7788889999
Q ss_pred CCcEEEEecccccCcce----e---ccCcccceEEEecCCCccc-CCCcceEEEe--cHHHHHHhccCCCCccccchHHH
Q 015729 168 HPALFLVDGVSSICAID----F---RMDEWGIDVALTGSQKALS-LPTGMGIVCA--SPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~----~---~~~~~~~di~~~s~~K~l~-g~~g~G~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
+|++||+|++|...... . ........+++.|.+|.++ .+..+|+++. +++..+.+...
T Consensus 200 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~------------ 267 (404)
T PRK09265 200 HNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEG------------ 267 (404)
T ss_pred CCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHH------------
Confidence 99999999998642210 1 1111123467788999983 2334699986 33322211100
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
....... ..+++.....++.+++...... .+.+..+++.++++.+.+.|+++ |+.+..+ ..+.++|+.+|.
T Consensus 268 ~~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p----~~g~~l~~~~~~ 340 (404)
T PRK09265 268 LDMLASM---RLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKP----KGALYAFPKLDP 340 (404)
T ss_pred HHHHhcc---ccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----CcceEEEEEecc
Confidence 0000000 1123333334444444311110 01112245667778888888876 7665443 345678888864
Q ss_pred CC----CHHH-HHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 316 HI----NSSE-IVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 316 ~~----~~~~-l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.. +..+ +.+.| .+.||.+.+|... ..++++|+++. .+++++++++++|+++++.
T Consensus 341 ~~~~~~~~~~~~~~~l-~~~gv~v~pg~~F~~~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 341 KVYPIHDDEQFVLDLL-LQEKVLLVQGTGFNWPEPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred cccCCCCHHHHHHHHH-HhCCEEEECchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 31 3344 44445 4559999998442 23578999884 5899999999999998864
No 126
>PRK08175 aminotransferase; Validated
Probab=99.96 E-value=1.2e-26 Score=221.38 Aligned_cols=324 Identities=13% Similarity=0.122 Sum_probs=223.3
Q ss_pred hHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 21 PDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 21 ~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
++.+.+++.+... ....+.......++|+.+++++ |.. +.+++++|+|+++++..++..++++||+|+++.|
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P 123 (395)
T PRK08175 44 PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNP 123 (395)
T ss_pred CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCC
Confidence 4445555444221 1122333344557777777765 432 3335999999999999988888999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcCCC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHP 169 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~ 169 (401)
+|+... ..++..|++++.++.++++. +++++++++++.. .+++++++++|+||||.+++. ++|.++|++ +|
T Consensus 124 ~y~~~~--~~~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~--~~ 197 (395)
T PRK08175 124 SYPIHI--YGAVIAGAQVRSVPLVEGVD-FFNELERAIRESY-PKPKMMILGFPSNPTAQCVELEFFEKVVALAKR--YD 197 (395)
T ss_pred CCcchH--HHHHHcCCeEEEEecccCCC-cHHHHHHHHhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH--cC
Confidence 877654 33567899999999876543 4888998887532 367999999999999999987 678888999 99
Q ss_pred cEEEEecccccCcc----ee---ccCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 170 ALFLVDGVSSICAI----DF---RMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 170 ~~li~D~a~~~~~~----~~---~~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
++||+|+++..... .. .... .+..+++.|.+|.++ .+.++|+++.++++.+.+..... .
T Consensus 198 i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~------------~ 265 (395)
T PRK08175 198 VLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKS------------Y 265 (395)
T ss_pred cEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHh------------h
Confidence 99999999864321 01 1111 234577899999984 22346999999988776653210 0
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC---
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI--- 317 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~--- 317 (401)
. ..+.+.....++.+++... +..+++.++++.++++++.+.|++.|+.+..+ ..+.++|+++|+..
T Consensus 266 ~------~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p----~~g~~i~i~l~~~~~~~ 334 (395)
T PRK08175 266 H------DYGTFTPLQVAAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMP----KASMYVWAKIPEPYAAM 334 (395)
T ss_pred c------ccCCCcHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CEEEEEEEECCcccCCC
Confidence 0 1112222223333444321 22366778888899999999999887665433 24568889987653
Q ss_pred CHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 318 NSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 318 ~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
++.+++..|.++.||.+.++.. ....+++||++. .+++++++++++|.+.+++.|.
T Consensus 335 ~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~~~~ 392 (395)
T PRK08175 335 GSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMFRADGL 392 (395)
T ss_pred CHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhcCC
Confidence 4678888877666999999843 223468999875 4789999999999999987764
No 127
>PLN02721 threonine aldolase
Probab=99.96 E-value=7.8e-27 Score=219.90 Aligned_cols=320 Identities=16% Similarity=0.122 Sum_probs=218.2
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC-CCCeEEEEcCCc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-PGDRIISFLIGQ 94 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~-~gd~vl~~~~~~ 94 (401)
-|..+++.+.+++.+.........+.....++++.+++++|.+. .+++++|++++..++.++.. +||+|++++++|
T Consensus 14 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~ 90 (353)
T PLN02721 14 TVTKPTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKEA---ALFVPSGTMGNLISVLVHCDVRGSEVILGDNSH 90 (353)
T ss_pred cccCCCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCce---eEEecCccHHHHHHHHHHccCCCCeEEEcCccc
Confidence 34556788888887631112122223447899999999999865 56777788888777777676 999999999987
Q ss_pred chHHH-HHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC---CCceEEEEEec-CCCcccccc---hHHHHHHhhhc
Q 015729 95 FSLLW-IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA---HTIKAICIVHN-ETATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 95 ~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~---~~~~~i~~~~~-~n~tG~~~~---l~~i~~l~~~~ 166 (401)
++..- ...+...|++++.++.+.++.+|++++++.+++... +++++++++++ +||+|.++| +++|.++|++
T Consensus 91 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~- 169 (353)
T PLN02721 91 IHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR- 169 (353)
T ss_pred eehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH-
Confidence 65541 125677899999999887778899999999974210 25689999775 678999887 6789999999
Q ss_pred CCCcEEEEecccccCcce---eccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 167 RHPALFLVDGVSSICAID---FRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~---~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
+|+++|+|++|.++... .+.. ..++|.++.|.||+++++.| ++++.++++.+.+.... ..
T Consensus 170 -~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~-------------~~ 234 (353)
T PLN02721 170 -HGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVG-SVIVGSKSFIRKAKRLR-------------KT 234 (353)
T ss_pred -cCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCcee-eEEecCHHHHHhHHHHH-------------Hh
Confidence 99999999998765321 1111 23678889999999975443 45677888766544211 00
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCcc-ccCCCccCCceeEEEEcCCC--C
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKN-CTQKEEWFSDTVTAVIVPSH--I 317 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~--~ 317 (401)
..+ ++......++ +++..+.. ..+ ..++..++.+.+.+.|+++ ++.+ ... + .. .++++.++.+ .
T Consensus 235 ~~~-----~~~~~~~~~~-~~~~~l~~-~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~ 302 (353)
T PLN02721 235 LGG-----GMRQVGVLAA-AALVALQE-NVP-KLEDDHKKAKLLAEGLNQIKGLRVNVAA-V--ET-NIVYFDITDGSRI 302 (353)
T ss_pred cCC-----CeehhHHHHH-HHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhCCCcEEecCC-c--cc-eEEEEEccCCccc
Confidence 011 1111111111 12222221 122 2344466788899999887 6644 222 1 23 3677887643 4
Q ss_pred CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 318 NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 318 ~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+...+++.|.++ ||.+.++. ..++|+++..+.+++|+++++++|++++.
T Consensus 303 ~~~~~~~~L~~~-gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 303 TAEKLCKSLEEH-GVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred cHHHHHHHHHhC-CcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 678899999855 99998763 45899998778899999999999998765
No 128
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=6.2e-27 Score=221.49 Aligned_cols=312 Identities=14% Similarity=0.094 Sum_probs=223.9
Q ss_pred CCcCChHHHHHHHccCcC----CCCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 16 GPVHIPDQVIRAMNRNNE----DYRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
.|.+.++.+++++.+... ....+. .....++|+.+++++ |.+ .++++++|+|+++++..++.+++++||.
T Consensus 36 ~~~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~ 114 (368)
T PRK03317 36 NPYPPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRT 114 (368)
T ss_pred CCCCCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCE
Confidence 366788888888876432 111222 124568888898888 432 3355999999999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.|+|+.+. ..++..|++++.++.+.++.+|++++++++++ ++++++++++|+||||.+++.+++.++++.
T Consensus 115 v~v~~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~- 188 (368)
T PRK03317 115 ALGFVPSYSMHP--IIARGTHTEWVEGPRAADFTLDVDAAVAAIAE---HRPDVVFLTSPNNPTGTALPLDDVEAILDA- 188 (368)
T ss_pred EEEeCCChHHHH--HHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHH-
Confidence 999999876554 55677888888888776778999999999874 356899999999999999999999999999
Q ss_pred CCCcEEEEecccccCcce-----ecc-CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 167 RHPALFLVDGVSSICAID-----FRM-DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~-----~~~-~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
.+++||+|++|+..... ... ......+++.|.+|.++ ++.++|++++++++.+.+.....
T Consensus 189 -~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~------------ 255 (368)
T PRK03317 189 -APGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRL------------ 255 (368)
T ss_pred -CCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCC------------
Confidence 78999999998743211 111 11123477889999985 34457999999998877753211
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCH
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINS 319 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (401)
.++.+...++++.++++... .+.+.++++.++++.+.+.|++.|+.+..+ ..+.+++..++ +.
T Consensus 256 --------~~~~s~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~~---~~ 318 (368)
T PRK03317 256 --------PYHLSAVTQAAARAALRHAD--ELLASVAALRAERDRVVAWLRELGLRVAPS----DANFVLFGRFA---DR 318 (368)
T ss_pred --------CCCCCHHHHHHHHHHhhCHH--HHHHHHHHHHHHHHHHHHHHHHCCCEeCCC----CCcEEEEeccC---CH
Confidence 12244444455555555322 234455667788888888888888765543 23334433442 56
Q ss_pred HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 320 SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 320 ~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.++.+.|.++ ||.+.+.. ..+++||++. +.+++++++++++++++
T Consensus 319 ~~~~~~l~~~-Gv~v~~~~---~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 319 HAVWQGLLDR-GVLIRDVG---IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred HHHHHHHHHC-CEEEEeCC---CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 7888888765 99997642 2568999754 67899999999998875
No 129
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=1.7e-26 Score=219.44 Aligned_cols=315 Identities=11% Similarity=0.091 Sum_probs=216.4
Q ss_pred CChHHHHHHHccCcC-CCCCc----cHHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNE-DYRSP----AVPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~-~~~~~----~~~~~~~~l~~~la~~~g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
+.++.+.+++.+... ....| +..++.+++.+.+++.+|.+ +++++++++|+++|+..++.+++.+||+|+++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~ 121 (384)
T PRK12414 42 APDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFE 121 (384)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeC
Confidence 446667776665221 11222 23455556666666667875 234599999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcC
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~ 167 (401)
|+|..+. ..++..|++++.++.+. ++.+|++.+++++++ +++++++++++||||.+++ +++|.++|++
T Consensus 122 p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~-- 193 (384)
T PRK12414 122 PSFDSYA--PIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP----RTRMIIVNTPHNPSATVFSAADLARLAQLTRN-- 193 (384)
T ss_pred CCccchH--HHHHHcCCEEEEEecCccccccCHHHHHhhcCc----ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 9876543 45677899999999874 457899999998863 5799999999999999975 6678888888
Q ss_pred CCcEEEEecccccCcce---e-cc---Cc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 168 HPALFLVDGVSSICAID---F-RM---DE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 168 ~~~~li~D~a~~~~~~~---~-~~---~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|+++|+|++|...... . .. .. .+..+++.|.+|.++ .+.++|++++++++.+.+.....
T Consensus 194 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~----------- 262 (384)
T PRK12414 194 TDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQ----------- 262 (384)
T ss_pred CCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHh-----------
Confidence 99999999998743211 1 11 11 124588999999884 33457999999988776653211
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC--
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-- 315 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-- 315 (401)
. . ..+.+.....++. ..+... .+.+.++.++++++.+.+.|++.|+.+..+ ..+.++|+.++.
T Consensus 263 --~--~---~~~~s~~~q~a~~---~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~gg~~~~~~~~~~~ 328 (384)
T PRK12414 263 --F--M---VFSADTPMQHAFA---EALAEPASYLGLGAFYQRKRDLLARELAGSRFELLPS----EGSFFMLARFRHFS 328 (384)
T ss_pred --h--e---ecCCCcHHHHHHH---HHhcCChHHHHHHHHHHHHHHHHHHHHHhCCCeecCC----CcceEEEEcccccC
Confidence 0 0 1113332223333 333221 244567778888999999999887665543 245677777753
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC----CCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 316 HINSSEIVRRAWQRYNLSLGLGLNKV----AGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 316 ~~~~~~l~~~L~~~~~i~v~~g~~~~----~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
+.+..++...+.++.||.+.+|.... ..+++||++.. +++++++++++|.+
T Consensus 329 ~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 22456777665555699999984321 24689998775 78999999998864
No 130
>PRK07908 hypothetical protein; Provisional
Probab=99.96 E-value=1.5e-26 Score=217.34 Aligned_cols=308 Identities=12% Similarity=0.051 Sum_probs=215.7
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
|..+++.+++++.+.......+.......++|+.++++++.+++ ++++|+|+++|+..++. +++ +.+++..|++..
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~-~I~it~Ga~~al~~~~~--l~~-~~viv~~P~y~~ 108 (349)
T PRK07908 33 HDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPD-EVLLLAGAAEGFALLAR--LRP-RRAAVVHPSFTE 108 (349)
T ss_pred CCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChh-hEEECCCHHHHHHHHHh--cCC-CeEEEeCCCChH
Confidence 46678888888887543332333335577899999999998664 59999999999998877 567 466777776554
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
. + ..++..|++++.++++.++.+|++.+ + ++++++++++|+||||.+++.++|.++|+ ++.++|+|+
T Consensus 109 ~-~-~~~~~~G~~i~~v~~~~~~~~d~~~l----~----~~~~~i~l~np~NPTG~~~~~~~l~~l~~---~~~~iIvDe 175 (349)
T PRK07908 109 P-E-AALRAAGIPVHRVVLDPPFRLDPAAV----P----DDADLVVIGNPTNPTSVLHPAEQLLALRR---PGRILVVDE 175 (349)
T ss_pred H-H-HHHHHcCCEEEeeccCcccCcChhHh----c----cCCCEEEEcCCCCCCCCCcCHHHHHHHHh---cCCEEEEEC
Confidence 3 2 56778999999999887667788754 2 35689999999999999999999999985 466888899
Q ss_pred ccccCc--ceeccC--cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 177 VSSICA--IDFRMD--EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 177 a~~~~~--~~~~~~--~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
+|+... ...... .....+++.|.||.++ .+.++|++++++++++.+..... .++.
T Consensus 176 ~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~--------------------~~~~ 235 (349)
T PRK07908 176 AFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRA--------------------HWPV 235 (349)
T ss_pred cchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCC--------------------CCCc
Confidence 986321 111111 2233577779999884 33446999999998887764321 1123
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCC
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYN 331 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 331 (401)
+.....++.+.++......+++.++++.++++++.+.|++.|+++..+. .+.++++.+|+ ...+.+.|.++ |
T Consensus 236 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~----~g~~~~~~~~~---~~~~~~~l~~~-g 307 (349)
T PRK07908 236 GTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPA----AAPFVLVRVPD---AELLRKRLRER-G 307 (349)
T ss_pred cHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCC----CceEEEEECCc---HHHHHHHHHhC-C
Confidence 3333333322222101112566788888999999999988777665432 34678888863 56777777655 9
Q ss_pred eEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 332 LSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 332 i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
|.+.+|... ...+++||++. +++|+++++++|++++..
T Consensus 308 I~v~~g~~f~~~~~~~vRis~~---~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 308 IAVRRGDTFPGLDPDYLRLAVR---PRAEVPVLVQALAEILKA 347 (349)
T ss_pred EEEEECCCCCCCCCCeEEEEeC---CCccHHHHHHHHHHHHhc
Confidence 999998542 23578999873 788999999999887653
No 131
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.3e-26 Score=221.68 Aligned_cols=328 Identities=16% Similarity=0.160 Sum_probs=226.8
Q ss_pred cccccCCC-cCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhc-----CCCCceEEecCChhHHHHHHHhccCCC
Q 015729 10 NHLFVPGP-VHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFK-----TTSGTPFLIPTTGTGAWESALTNTLSP 83 (401)
Q Consensus 10 ~~~~~~~p-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g-----~~~~~~i~~~~g~t~a~~~~~~~~~~~ 83 (401)
.++..+.| .+.++.+.+++.+.......+.......++|+.++++++ .++ +++++++|+++|+..++.+++++
T Consensus 33 i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~ 111 (397)
T PRK07568 33 YHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEP-DEILITNGGSEAILFAMMAICDP 111 (397)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCc-ceEEEcCChHHHHHHHHHHhcCC
Confidence 33444444 456788888887643322233334456788888888874 333 45999999999999998888999
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC--C-CChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hH
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE--G-AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LS 157 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~-~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~ 157 (401)
||+|++++|.|..+ ...++..|++++.++.+.+. . .+++++++.+++ +++++++++|+||||.+++ ++
T Consensus 112 gd~Vl~~~p~y~~~--~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~----~~~~v~i~~p~NPtG~~~~~~~~~ 185 (397)
T PRK07568 112 GDEILVPEPFYANY--NGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP----KTKAILISNPGNPTGVVYTKEELE 185 (397)
T ss_pred CCEEEEecCCCccH--HHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc----cceEEEEECCCCCCCccCCHHHHH
Confidence 99999999866543 34567889999999986432 2 256889888863 5689999999999999986 67
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcce-------eccCc-ccceEEEecCCCcccC-CCcceEEEec-HHHHHHhccCCC
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAID-------FRMDE-WGIDVALTGSQKALSL-PTGMGIVCAS-PKALEASKTAKS 227 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~~-------~~~~~-~~~di~~~s~~K~l~g-~~g~G~l~~~-~~~~~~~~~~~~ 227 (401)
+|.++|++ +|++||+|+++...... ..... ....+++.|.+|.++. +.++|+++++ +++.+.+.....
T Consensus 186 ~i~~~~~~--~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~ 263 (397)
T PRK07568 186 MLAEIAKK--HDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQ 263 (397)
T ss_pred HHHHHHHH--CCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhh
Confidence 78888888 99999999998643210 11111 2345888999999852 4457999874 566554432100
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCc
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSD 306 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 306 (401)
. .++++.....++..+++.. +..+++.+++++++++.+.+.|++. ++.+..+ ..+
T Consensus 264 ----------------~---~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~ 319 (397)
T PRK07568 264 ----------------A---RLSPPTLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP----KGA 319 (397)
T ss_pred ----------------c---cCCCCcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----Ccc
Confidence 0 1123333334444444321 2236677888889999999999886 6554433 244
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhh-----CCeEEccCCCC----C-CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQR-----YNLSLGLGLNK----V-AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~-----~~i~v~~g~~~----~-~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.++|+++|.. +..++.+.|.++ .||.+.+|... . .++++||++.. +++++++++++|++.+++.
T Consensus 320 ~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~--~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 320 FYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL--NEEDLKRAMEILKEALEKY 393 (397)
T ss_pred eEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHh
Confidence 5678888643 677888888753 58999998432 1 23689998764 6899999999999988754
No 132
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.1e-26 Score=218.12 Aligned_cols=317 Identities=13% Similarity=0.068 Sum_probs=219.6
Q ss_pred CcCChHHHHHHHccCcCC---CCCccHHHHHHHHHHHHHHHhcCC-------CCceEEecCChhHHHHHHHhccCCCCC-
Q 015729 17 PVHIPDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTT-------SGTPFLIPTTGTGAWESALTNTLSPGD- 85 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g~~-------~~~~i~~~~g~t~a~~~~~~~~~~~gd- 85 (401)
|.++++.+++++.+.... ...+. .....++|+.++++++.. .+++|++|+|+++++..++.+++.+||
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~ 117 (374)
T PRK02610 39 PYDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEG 117 (374)
T ss_pred CCCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCC
Confidence 567888898888763221 11222 245678999999999721 335599999999999987777777775
Q ss_pred eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhh
Q 015729 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (401)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~ 164 (401)
+|++++|+|+.+ ...++..|++++.++.+.+ +.+|++++++++++...++++++++++|+||||.+++.+++.++.+
T Consensus 118 ~Vlv~~P~y~~~--~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~ 195 (374)
T PRK02610 118 SILVAEPTFSMY--GILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRS 195 (374)
T ss_pred eEEEcCCChHHH--HHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHh
Confidence 899999976654 3667889999999998653 6789999999886421136799999999999999999988887765
Q ss_pred hcCCCcEEEEecccccCcce---eccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 165 EYRHPALFLVDGVSSICAID---FRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~~---~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
. .++++||+|+++...... .........+++.|.+|.++ .+.++|+++.++++.+.+...+.
T Consensus 196 ~-~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~------------- 261 (374)
T PRK02610 196 L-PEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRL------------- 261 (374)
T ss_pred c-cCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcC-------------
Confidence 3 258999999998643211 11112223577899999993 34457999999988877654321
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCH
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINS 319 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (401)
.++.+.....++..+++... .+.+..++..+.++.+.+.|+++ ++.+. + ..+.++|+++|.+.+.
T Consensus 262 -------~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p----~~g~f~~~~l~~~~~~ 327 (374)
T PRK02610 262 -------PYNLPSFSQLAAQLALEHRQ--ELLAAIPEILQERDRLYQALQELPQLRVW-P----SAANFLYLRLSQDAAL 327 (374)
T ss_pred -------CCCCCHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHhCCCcEeC-C----CcceEEEEeCCCCCCH
Confidence 11233333344444443221 12233333444566777888776 65543 2 2345788998776678
Q ss_pred HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 320 SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 320 ~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.++.+.|.++ ||.++.+ .+++||++. +.+++++++++|+++++.+
T Consensus 328 ~~~~~~l~~~-gi~v~~~-----~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 328 AALHQALKAQ-GTLVRHT-----GGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred HHHHHHHHHC-CEEEEeC-----CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 8999988655 9998643 468999864 4577899999999988654
No 133
>PRK07777 aminotransferase; Validated
Probab=99.96 E-value=2.6e-26 Score=218.70 Aligned_cols=296 Identities=15% Similarity=0.104 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHH----hcCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC
Q 015729 42 ALTKTLLEDIKKI----FKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (401)
Q Consensus 42 ~~~~~l~~~la~~----~g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (401)
....++++.++++ +|.+ +++++++|+|+++|+..++.+++++||+|+++.+.|+++. ..++..|.+++.++.
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~--~~~~~~g~~~~~~~~ 138 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA--AVIAMAGAHRVPVPL 138 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--HHHHHCCCEEEEeec
Confidence 3345666666654 5654 2225999999999999999888999999999999766543 566778999999988
Q ss_pred CCC---CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcc------
Q 015729 116 DWG---EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAI------ 183 (401)
Q Consensus 116 ~~~---~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~------ 183 (401)
+++ +.+|++++++.+++ +++++++++++||||.+++ +++|.++|++ +++++|+|++|.....
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~--~~~~li~De~y~~~~~~~~~~~ 212 (387)
T PRK07777 139 VPDGRGFALDLDALRAAVTP----RTRALIVNSPHNPTGTVLTAAELAAIAELAVE--HDLLVITDEVYEHLVFDGARHL 212 (387)
T ss_pred CCccCCCcCCHHHHHHhcCc----ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHh--cCcEEEEeccchhcccCCCCcc
Confidence 654 35899999998863 5689999999999999986 6778899999 9999999999864321
Q ss_pred eec-cC-cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHH
Q 015729 184 DFR-MD-EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLR 260 (401)
Q Consensus 184 ~~~-~~-~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~ 260 (401)
++. .. ..+.++++.|.+|.++ .+.++|+++.++++.+.+..... + . .+..+.....++.
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~-------------~--~---~~~~~~~~q~~~~ 274 (387)
T PRK07777 213 PLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQ-------------Y--L---TYVGGAPFQPAVA 274 (387)
T ss_pred cHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHh-------------h--c---ccCCCCHHHHHHH
Confidence 111 11 1346899999999995 23347999999988766653210 0 0 1111221222233
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC--CCCHHHHHHHHHhhCCeEEccCC
Q 015729 261 AALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--HINSSEIVRRAWQRYNLSLGLGL 338 (401)
Q Consensus 261 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~i~v~~g~ 338 (401)
.++..- +..+++.++.+.++++.+.+.|++.|+++..+ ..+.++|++++. ..++.++++.|.+++||.|.+|.
T Consensus 275 ~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~ 349 (387)
T PRK07777 275 HALDHE-DAWVAALRDSLQAKRDRLAAGLAEAGFEVHDS----AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMS 349 (387)
T ss_pred HHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCccCC----CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCch
Confidence 333211 12255677888999999999999888776554 244677777642 23678999999866799999984
Q ss_pred CC-----CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 339 NK-----VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 339 ~~-----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.. ...+++|+++.. +++++++++++|++..
T Consensus 350 ~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 350 VFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRALR 384 (387)
T ss_pred HhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 21 113579998764 7999999999998765
No 134
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=2.4e-26 Score=222.54 Aligned_cols=303 Identities=15% Similarity=0.114 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHhcC------C-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHH-HcCCcEEEEe
Q 015729 43 LTKTLLEDIKKIFKT------T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQ-RLNFNVDVVE 114 (401)
Q Consensus 43 ~~~~l~~~la~~~g~------~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~ 114 (401)
...++|+.++++++. + .+++|++|+|+++++..++.+++++||.|++++|.|+.+. ..+. ..|++++.++
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~--~~~~~~~g~~~v~v~ 164 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFD--RDLKWRTGVEIVPIH 164 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchH--HHHhhcCCcEEEEEe
Confidence 456788888888852 1 3455999999999999999999999999999999776653 2333 5799999999
Q ss_pred CCC--CCCCChHHHHHHHhcc--CCCCceEEEEEecCCCcccccch---HHHHHHhhhcCCCcEEEEecccccCcc---e
Q 015729 115 SDW--GEGAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAI---D 184 (401)
Q Consensus 115 ~~~--~~~~d~~~le~~~~~~--~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~---~ 184 (401)
++. +..+|++++++++.+. .+.+++++++++|+||||.+++. ++|.++|++ +|++||+|++|+.... +
T Consensus 165 ~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~--~~~~iI~DE~Y~~~~f~~~~ 242 (468)
T PLN02450 165 CSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITA--KNIHLISDEIYSGTVFDSPG 242 (468)
T ss_pred cCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHH--CCcEEEEEccccccccCCCC
Confidence 853 4456889999887641 11368999999999999999974 567788888 9999999999873211 1
Q ss_pred e----cc---------CcccceEEEecCCCccc-CCCcceEEEecHHH-HHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 185 F----RM---------DEWGIDVALTGSQKALS-LPTGMGIVCASPKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 185 ~----~~---------~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
+ .. +.....+++.|.+|.++ .+..+|+++++++. .+.+... . .+.
T Consensus 243 ~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~------------------~-~~~- 302 (468)
T PLN02450 243 FVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKM------------------S-SFG- 302 (468)
T ss_pred cccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHH------------------h-hcC-
Confidence 1 11 01235688999999985 44567999997554 3322211 0 001
Q ss_pred CCcHHHHHHHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC------HHH
Q 015729 250 TPSIQLLYGLRAALDL--IFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN------SSE 321 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 321 (401)
..+.....++..+++. +.+..+++.++++.+.++.+.+.|++.|+++..+ ..+.++|+.++...+ ..+
T Consensus 303 ~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~----~~g~flwi~l~~~~~~~~~~~~~~ 378 (468)
T PLN02450 303 LVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKS----NAGLFCWVDMRHLLKSNTFEAEME 378 (468)
T ss_pred CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CceEEEEEEchHhcCcCCchHHHH
Confidence 1333333333333321 1111245667888888889999998888776543 355688888864322 235
Q ss_pred HHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 322 IVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+.+.|.++.||.+.||... ...+++||++.. .+++++++++++|++++++..
T Consensus 379 l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 379 LWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred HHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 6677776679999999542 235789997764 678999999999999987654
No 135
>PRK03321 putative aminotransferase; Provisional
Probab=99.96 E-value=7.6e-27 Score=219.67 Aligned_cols=310 Identities=14% Similarity=0.082 Sum_probs=221.3
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
+..+++.+.+++.+.......+. .....++++.++++++.++. ++++++|+++++..++..++++||+|+++.+.+..
T Consensus 33 ~~~~~~~~~~a~~~~~~~~~~y~-~~g~~~lr~~ia~~~~~~~~-~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~ 110 (352)
T PRK03321 33 PFGPLPSVRAAIARAAAGVNRYP-DMGAVELRAALAEHLGVPPE-HVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEA 110 (352)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCC-CCcHHHHHHHHHHHhCcCHH-HEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHH
Confidence 34466788888876443222222 24578999999999997654 49999999999998888889999999999886543
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
+ ...++..|++++.++.++++.+|++++++.++. +++++++++++||||.++|.++|.++|+.++++++||+|+
T Consensus 111 ~--~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~----~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De 184 (352)
T PRK03321 111 Y--PILVQVAGATPVQVPLTPDHTHDLDAMAAAITD----RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDE 184 (352)
T ss_pred H--HHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc----CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEec
Confidence 3 345678899999999886677899999998863 5689999999999999999999999999855799999999
Q ss_pred ccccCcce------ecc-CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 177 VSSICAID------FRM-DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 177 a~~~~~~~------~~~-~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
+|...... +.. ......+++.|.+|.++ .+.++|++++++++.+.+.... . .
T Consensus 185 ~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~-----------------~---~ 244 (352)
T PRK03321 185 AYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVA-----------------V---P 244 (352)
T ss_pred hHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhc-----------------C---C
Confidence 98633211 111 11234577889999984 2334799999998887765321 0 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHh
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (401)
++.+.....++.+++... ..+.+..++..+.++.+.+.|++.|+.+..+ .+.++++.++. +..++.+.|.+
T Consensus 245 ~~~s~~~q~~a~~~l~~~--~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~-----~g~~i~i~l~~--~~~~~~~~l~~ 315 (352)
T PRK03321 245 FSVNSLAQAAAIASLAAE--DELLERVDAVVAERDRVRAALRAAGWTVPPS-----QANFVWLPLGE--RTADFAAAAAE 315 (352)
T ss_pred CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-----CCCEEEEeCCC--CHHHHHHHHHH
Confidence 234444444444444321 1234445555666677888888877654321 23567777742 57789999865
Q ss_pred hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 329 ~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.||.+.+. ....+||++ .+.++.+++++++++++.
T Consensus 316 -~gI~v~~~----~~~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 316 -AGVVVRPF----AGEGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred -CCEEEEcc----CCCcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 49999862 234699975 379999999999998764
No 136
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=217.98 Aligned_cols=316 Identities=15% Similarity=0.109 Sum_probs=218.2
Q ss_pred CcccccC--CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 9 KNHLFVP--GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 9 ~~~~~~~--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
+.+.++- .|..+++.+.+++.+.......+. .....++++.++++++.+++ ++++++|+++++..++.+++++||+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~~~~lr~~ia~~~~~~~~-~I~it~G~~~al~~~~~~~~~~gd~ 108 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERVHSYP-KASHADLTAALADRWDVSPE-QVWLANGGDGALDYLARAMLDPGDT 108 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHHhcCCCCE
Confidence 3444544 356677778888776432222222 12356899999999998764 4999999999999999999999999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhh
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~ 164 (401)
|++++|+|..+. ..++..|++++.++++. +..+|.+++++... +++++++++|+||||.+++.+++.++++
T Consensus 109 V~v~~P~y~~~~--~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~k~i~l~~p~NPTG~~~s~~~~~~l~~ 181 (357)
T PRK14809 109 VLVPDPGFAYYG--MSARYHHGEVREYPVSKADDFEQTADTVLDAYD-----GERIVYLTSPHNPTGSEIPLDEVEALAE 181 (357)
T ss_pred EEEeCCChHHHH--HHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-----CCcEEEEeCCCCCCCcCCCHHHHHHHHH
Confidence 999999765433 45666788888888754 34556776666542 4689999999999999999999888888
Q ss_pred hcCCCcEEEEecccccCcce---e-ccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 165 EYRHPALFLVDGVSSICAID---F-RMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~~---~-~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
.+..+++||+|++|...... . ........+++.|.+|.++ .+.++|++++++++.+++.....
T Consensus 182 ~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~------------ 249 (357)
T PRK14809 182 RTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNT------------ 249 (357)
T ss_pred hCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCC------------
Confidence 74357899999998743221 1 1112234578899999985 34457999999998777654210
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
.+..+... +.+++..+... .+++.++.++++++.+.+.|...++ . ..+.+++++++ +
T Consensus 250 --------~~~~~~~~---~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~---~-----~~g~f~~~~~~---~ 307 (357)
T PRK14809 250 --------PFAASELA---CRAGLAALDDDEHVERTVETARWAREYIREELDAPTW---E-----SAGNFVLAEVG---D 307 (357)
T ss_pred --------CCCCCHHH---HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCccC---C-----CCCCEEEEECC---C
Confidence 11233332 33333333322 2555666677777777777754321 1 13356777774 4
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
..++.+.|.++ ||.+.+|.....++++||++. +.+++++++++|+++++
T Consensus 308 ~~~~~~~l~~~-gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 ASAVAEAAQER-GVIVRDCTSFGLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHHHC-CEEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 67888888655 999999965444678999853 57899999999998764
No 137
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.96 E-value=1.5e-26 Score=221.64 Aligned_cols=327 Identities=12% Similarity=0.082 Sum_probs=212.6
Q ss_pred CcCChHHHHHHHccCcC------CCCCccHHHHHHHHHHHHHHHh------cCCCCceEEecCChhHHHHHHHhccCCCC
Q 015729 17 PVHIPDQVIRAMNRNNE------DYRSPAVPALTKTLLEDIKKIF------KTTSGTPFLIPTTGTGAWESALTNTLSPG 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~------~~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a~~~~~~~~~~~g 84 (401)
+.++++.+.+++.+... ....+.......++|+.+++++ +.++ +++++|+|+++|+..+ ..++.+|
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-~~I~it~Ga~~al~~l-~~~~~~g 122 (409)
T PRK07590 45 TQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISA-DEIFISDGAKCDTGNI-LDIFGPD 122 (409)
T ss_pred CCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCCh-hhEEECCCHHHHHHHH-HHhcCCC
Confidence 34456666776665322 1123333445668888888876 3334 5599999999999875 4567899
Q ss_pred CeEEEEcCCcchHHHHHHHHHcCCc-----------EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 85 DRIISFLIGQFSLLWIDQQQRLNFN-----------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
|+|++.+|+|+.+. ..++..|++ ++.++++.++.+.++. .+ ++++++++++|+||||.+
T Consensus 123 d~V~v~~P~Y~~~~--~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~-----~~---~~~k~i~l~nP~NPTG~~ 192 (409)
T PRK07590 123 NTIAVTDPVYPVYV--DTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPEL-----PE---EKVDIIYLCFPNNPTGTV 192 (409)
T ss_pred CEEEEeCCCCcchH--HHHHHcCCcccccccccccceeEeecccccCCcccC-----cc---cCceEEEEeCCCCCcCCc
Confidence 99999999887654 556777876 8888886543333321 11 367999999999999999
Q ss_pred cch---HHHHHHhhhcCCCcEEEEecccccCcc----ee---ccCcc-cceEEEecCCCccc-CCCcceEEEecHHHHHH
Q 015729 154 NNL---SKVRKLLDEYRHPALFLVDGVSSICAI----DF---RMDEW-GIDVALTGSQKALS-LPTGMGIVCASPKALEA 221 (401)
Q Consensus 154 ~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~----~~---~~~~~-~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~ 221 (401)
++. ++|.++|++ +|++||+|++|..... +. ..... ...+++.|.+|.++ .+..+|++++++++++.
T Consensus 193 ~s~~~~~~l~~~a~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~ 270 (409)
T PRK07590 193 LTKEQLKAWVDYAKE--NGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGK 270 (409)
T ss_pred CCHHHHHHHHHHHHH--cCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhh
Confidence 985 457777888 9999999999874321 11 11111 24577899999984 34557999999988764
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (401)
+...... ............. ..+.+.....++.+++..-....+++.+++++++++.+.+.|++.|+.+..+
T Consensus 271 ~~~~~~~----~~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-- 342 (409)
T PRK07590 271 TSDGEGV----SLNSLWNRRQSTK--FNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGG-- 342 (409)
T ss_pred ccccchh----hhHHHHHHHHhhc--ccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC--
Confidence 3211000 0000000000010 1123333333333333211112356677888888999999998887665432
Q ss_pred ccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
..+.++|+.+|++.+..++...|.+++||.+.+|... ...+++||++.. +++++++++++|.++
T Consensus 343 --~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 343 --VNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG--SRENVLEAMERIKKA 408 (409)
T ss_pred --CcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC--CHHHHHHHHHHHHhh
Confidence 2346888999876777888888877679999998432 224689998543 789999999999765
No 138
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=1.6e-26 Score=224.50 Aligned_cols=303 Identities=14% Similarity=0.107 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHhcC------C-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEe
Q 015729 42 ALTKTLLEDIKKIFKT------T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE 114 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~------~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 114 (401)
....++|+.++++++. + .+++|++++|+++|+..++.++++|||.|++++|.|+.+. ..+....|++++.++
T Consensus 94 ~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~-~~~~~~~G~~vv~v~ 172 (496)
T PLN02376 94 HGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFD-RDLRWRTGVEIIPVP 172 (496)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchH-HHHHhhCCCEEEEEe
Confidence 3456788888887761 1 3356999999999999999999999999999999877654 223335899999999
Q ss_pred CCC--CCCCChHHHHHHHhc--cCCCCceEEEEEecCCCcccccch---HHHHHHhhhcCCCcEEEEecccccCcc---e
Q 015729 115 SDW--GEGAKLDVLASKLAA--DTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAI---D 184 (401)
Q Consensus 115 ~~~--~~~~d~~~le~~~~~--~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~---~ 184 (401)
++. +..+|++++++++.. ....++|++++++|+||||.+++. ++|.++|++ +|++||+|++|+.... .
T Consensus 173 ~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~--~~i~lI~DEiY~~~~f~~~~ 250 (496)
T PLN02376 173 CSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTR--KNIHLVVDEIYAATVFAGGD 250 (496)
T ss_pred CCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHH--cCCEEEEEcCccccccCCCC
Confidence 853 457899999876532 111478999999999999999984 557788888 9999999999875321 1
Q ss_pred e-c---c----C--cc--cceEEEecCCCccc-CCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCC
Q 015729 185 F-R---M----D--EW--GIDVALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (401)
Q Consensus 185 ~-~---~----~--~~--~~di~~~s~~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 250 (401)
+ . . + .. ...+++.|.+|.++ .+.++|++++. +.+.+.+... .. .+.
T Consensus 251 ~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~------------------~~--~~~ 310 (496)
T PLN02376 251 FVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKM------------------SS--FGL 310 (496)
T ss_pred cccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHH------------------hh--cCC
Confidence 1 1 1 0 00 12345789999984 34557999985 4443322211 00 011
Q ss_pred CcHHHHHHHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC-------HHH
Q 015729 251 PSIQLLYGLRAALDL--IFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN-------SSE 321 (401)
Q Consensus 251 ~~~~~~~a~~~al~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 321 (401)
.+.....++.+.+.. +.+..+.+.++++.++.+.+.+.|++.|+++..+ ..+.++|+.++...+ ..+
T Consensus 311 vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~----~aG~flwi~l~~~~~~~~~~~~e~~ 386 (496)
T PLN02376 311 VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTS----NAGLFAWMDLRHLLRDRNSFESEIE 386 (496)
T ss_pred CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CceEEEEEEchhhhccCCchhHHHH
Confidence 333333333333321 1111234456777888888888998878776553 355788998864322 256
Q ss_pred HHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 322 IVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.+.|.++.||.+.+|... ...+++||++.. .++++++.++++|++++++
T Consensus 387 l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 387 LWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred HHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence 8888887779999999543 345799997654 5789999999999998864
No 139
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=4.6e-26 Score=218.86 Aligned_cols=303 Identities=13% Similarity=0.089 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHHHhcC------C-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEe
Q 015729 42 ALTKTLLEDIKKIFKT------T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE 114 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~------~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 114 (401)
....++|+.++++++. + .++++++++|+++|++.++.+++.|||.|+++.|.|+++. ..+..+.|++++.|+
T Consensus 95 ~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~-~~~~~~~g~~vv~v~ 173 (447)
T PLN02607 95 HGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFD-RDLRWRTGVKIVPIH 173 (447)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchH-HHHHhcCCcEEEEEe
Confidence 3466788888887752 1 3356999999999999998889999999999999776654 233335789999998
Q ss_pred CCCC--CCCChHHHHHHHhc--cCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcc---e
Q 015729 115 SDWG--EGAKLDVLASKLAA--DTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAI---D 184 (401)
Q Consensus 115 ~~~~--~~~d~~~le~~~~~--~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~---~ 184 (401)
++.. ..+|++++++++++ ..+.++|++++++|+||||.+++ +++|.++|++ +|+++|+|++|+.... +
T Consensus 174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~--~~i~lI~DEiYa~~~f~~~~ 251 (447)
T PLN02607 174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVR--KNIHLVSDEIYSGSVFSASE 251 (447)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHH--CCCEEEEeccccccccCCCC
Confidence 8754 35799999998864 22247899999999999999997 5678888998 9999999999874321 1
Q ss_pred e-cc-------C--c-ccceEEEecCCCccc-CCCcceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 185 F-RM-------D--E-WGIDVALTGSQKALS-LPTGMGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 185 ~-~~-------~--~-~~~di~~~s~~K~l~-g~~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
+ .. . . ....+++.|.+|.|+ .+.++|++++ ++++...+... . .+. ..
T Consensus 252 f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~------------------~-~~~-~~ 311 (447)
T PLN02607 252 FVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM------------------S-SFT-LV 311 (447)
T ss_pred cccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHH------------------h-hcC-CC
Confidence 1 00 0 1 223467889999984 3345699998 55554443321 0 001 12
Q ss_pred cHHHHHHHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC------CHHHHH
Q 015729 252 SIQLLYGLRAALDL--IFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI------NSSEIV 323 (401)
Q Consensus 252 ~~~~~~a~~~al~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~ 323 (401)
+.....++...+.. +.+.-++..++++.+..+.+.+.|++.|+++..+ ..+.++|+++++.. ...++.
T Consensus 312 s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~----~ag~fvw~~L~~~~~~~~~~~e~~l~ 387 (447)
T PLN02607 312 SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKG----NAGLFCWMNLSPLLETPTREGELALW 387 (447)
T ss_pred CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC----CeeEEEEEEchHhhcCCCchhHHHHH
Confidence 22222222223221 1111244567777888888999999888776543 35678999986422 123677
Q ss_pred HHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 324 RRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.|.++.||.+.+|.. ....+++||++.. .++++++.++++|.+++++
T Consensus 388 ~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 388 DSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred HHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 7777767999999954 3346899996654 6799999999999999864
No 140
>PRK06855 aminotransferase; Validated
Probab=99.96 E-value=5e-26 Score=219.05 Aligned_cols=325 Identities=12% Similarity=0.025 Sum_probs=217.4
Q ss_pred cCChHHHHHHHccCcC--CCCCccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 18 VHIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.++|+.+.+++.+... ....|.......++|+.+++++ |.+ .+++|++|+|+++|+..++. ++.+||.|++.
T Consensus 47 ~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~ 125 (433)
T PRK06855 47 EKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGP 125 (433)
T ss_pred CCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEe
Confidence 3666667766665321 1123444455668888888877 332 34569999999999998874 78999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~ 165 (401)
.|.|+.+.. ......|++++.+++++ ++.+|++++++.++.. .+++++++++|+||||.+++. ++|.++|++
T Consensus 126 ~P~Y~~~~~-~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~--~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~ 202 (433)
T PRK06855 126 SPAYSTHSS-AEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN--PSIAGILLINPDNPTGAVYPKEILREIVDIARE 202 (433)
T ss_pred CCCCchHHH-HHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC--CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 998876431 12344588888888764 3468999999998642 256899999999999999984 557778888
Q ss_pred cCCCcEEEEecccccCcce----e---ccCcccceEEEecCCCccc-CCCcceEEEec-----H---HHHHHhccCCCCc
Q 015729 166 YRHPALFLVDGVSSICAID----F---RMDEWGIDVALTGSQKALS-LPTGMGIVCAS-----P---KALEASKTAKSVR 229 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~----~---~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~-----~---~~~~~~~~~~~~~ 229 (401)
+|++||+|++|...... . .....+..+++.|.+|.++ .+..+|++++. + +..+.+....
T Consensus 203 --~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~--- 277 (433)
T PRK06855 203 --YDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAK--- 277 (433)
T ss_pred --cCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhh---
Confidence 99999999998643211 1 1111123488999999995 44567999973 2 1122221100
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-HhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCce
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-EEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDT 307 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 307 (401)
. . ...++.....++..+++.-. +..+++.+++++++.+.+.+.|++. |+.+..+ ..+.
T Consensus 278 ------------~-~---~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p----~gg~ 337 (433)
T PRK06855 278 ------------M-I---EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRT----NGAF 337 (433)
T ss_pred ------------c-c---ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCC----CeeE
Confidence 0 0 11133333333333332100 1125667788888889999999876 6554443 3457
Q ss_pred eEEEEcCCCC---------------------------CHHHHHHHHHhhCCeEEccCCCC-CCCcEEEEeecccCCHHHH
Q 015729 308 VTAVIVPSHI---------------------------NSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHLGHLNELQL 359 (401)
Q Consensus 308 ~~~~~~~~~~---------------------------~~~~l~~~L~~~~~i~v~~g~~~-~~~~~~Ri~~~~~~~~~di 359 (401)
++|+.+|++. +..+++..+.++.||.+.||... ..+..+||++.. .+++++
T Consensus 338 ~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i 416 (433)
T PRK06855 338 YMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKF 416 (433)
T ss_pred EEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHH
Confidence 8888887542 34567767666679999999443 223469998765 689999
Q ss_pred HHHHHHHHHHHHh
Q 015729 360 LGCLAGVEMILKD 372 (401)
Q Consensus 360 ~~~~~~i~~~l~~ 372 (401)
++++++|.+++++
T Consensus 417 ~~~~~~l~~~~~~ 429 (433)
T PRK06855 417 EWIYQTLAEKIEE 429 (433)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999874
No 141
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=5.3e-26 Score=209.72 Aligned_cols=329 Identities=18% Similarity=0.160 Sum_probs=257.0
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCCCC----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
...++.+.||--+--..+-+++.+++.++.....+ .+..+...+|+++|++++|.+. .++.++|-.|+..++.
T Consensus 41 ~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~---al~f~SGy~AN~~~i~ 117 (388)
T COG0156 41 VLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA---ALLFSSGFVANLGLLS 117 (388)
T ss_pred eEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc---EEEEcccchhHHHHHH
Confidence 45678889998887777888899999986544322 3456778899999999999987 6677788999999999
Q ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCC--CceEEEEEecCCCcccccch
Q 015729 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAH--TIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~--~~~~i~~~~~~n~tG~~~~l 156 (401)
++.+++|-|+.....|-|.. .-++..+++.+....+ |+++||+.+.+.... +.++|+...+.++.|.+.|+
T Consensus 118 ~l~~~~dli~~D~lnHASii--dG~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 118 ALLKKGDLIFSDELNHASII--DGIRLSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HhcCCCcEEEEechhhhhHH--HHHHhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 99999998888888777754 5577788888888764 899999999762211 45788888999999999999
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcce---------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
++|.+++++ |+.++++|++|+.|.+- +......+||++.+.+|.|+ ..| |++.++....+.+.....
T Consensus 191 ~~l~~L~~k--y~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~G-g~v~g~~~~~d~L~~~ar 266 (388)
T COG0156 191 PELVELAEK--YGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSG-GYIAGSAALIDYLRNRAR 266 (388)
T ss_pred HHHHHHHHH--hCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccC-ceeeCcHHHHHHHHHhCC
Confidence 999999999 99999999999988653 12222346899999999994 665 899999998887765422
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
.. -|..+.++..+++..++++.+.+. ...+++.+++...++..+...|+.+... .+ .
T Consensus 267 ~~----------------ifStalpP~~aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~~~~~~s----~s-~ 323 (388)
T COG0156 267 PF----------------IFSTALPPAVAAAALAALRILEEG--PERRERLQELAAFFRSLLKALGLVLLPS----ES-P 323 (388)
T ss_pred ce----------------eccCCCCHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCccCCC----CC-C
Confidence 11 123457777888899999988864 5788899999999997777777776442 23 3
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCC---cEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAG---KVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~---~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
++.+.+.+...+..++..|+++ ||.+.+..+|.-+ ..+|+++...+|++||+++++++.++
T Consensus 324 I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 324 IIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 5556664444577888999888 9999877664322 45999999999999999999998765
No 142
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.96 E-value=6.9e-26 Score=216.59 Aligned_cols=322 Identities=15% Similarity=0.084 Sum_probs=218.5
Q ss_pred CChHHHHHHHccCcCC---CCCc--cHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 19 HIPDQVIRAMNRNNED---YRSP--AVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~---~~~~--~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.++.+.+++.+.... .+.+ +..++.+++.+.+++.+|.+ .++++++++|+++|+..++.+++++||+|++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p 125 (402)
T PRK06107 46 DTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAP 125 (402)
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecC
Confidence 3456666666653221 1111 22344455555555556664 3456999999999999999888999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYR 167 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~ 167 (401)
.|+.+. ......+.+++.++++. ++.+|++++++.+. ++++++++++|+||||.+++. ++|+++|++
T Consensus 126 ~y~~y~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~-- 197 (402)
T PRK06107 126 YWVSYP--DMVLANDGTPVIVACPEEQGFKLTPEALEAAIT----PRTRWLILNAPSNPTGAVYSRAELRALADVLLR-- 197 (402)
T ss_pred CCcCHH--HHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC----cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 766553 34556677888888753 34578999999886 356899999999999999975 556777788
Q ss_pred C-CcEEEEecccccCcc---e---e-cc--CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 168 H-PALFLVDGVSSICAI---D---F-RM--DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 168 ~-~~~li~D~a~~~~~~---~---~-~~--~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
+ ++++|+|++|+.... + + .. ...+..+++.|.+|.++ .+.++|+++.++++.+.+.....
T Consensus 198 ~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~--------- 268 (402)
T PRK06107 198 HPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQS--------- 268 (402)
T ss_pred cCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHH---------
Confidence 7 999999999863211 1 0 11 11135678889999984 23346999999998776654211
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC-
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP- 314 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~- 314 (401)
. ...+++.....++..+++. ....+++.++.+.++++.+.+.|++. |+.+..+ ..+.++|+.++
T Consensus 269 ----~-----~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p----~gg~~~~~~~~~ 334 (402)
T PRK06107 269 ----Q-----SSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP----DGAFYLYVNCAG 334 (402)
T ss_pred ----h-----cccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----CcceEEeeeccc
Confidence 0 0112444433444444421 11125667778888888999999886 7666543 24556777652
Q ss_pred -------CCC---CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 315 -------SHI---NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 315 -------~~~---~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+. +..++...|.+++||.+.+|......+++||++.. +++++++++++|.+.++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~--~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 335 LIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT--SLETLEEACARIERAVAAL 401 (402)
T ss_pred ccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence 221 45677777766679999999654446799998875 7999999999999988764
No 143
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=218.07 Aligned_cols=284 Identities=15% Similarity=0.120 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAK 122 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 122 (401)
..++++.+++++|.+++ +|++++|+++++..++.+++++| |+|+++.|+|..+ ...++..|++++.++.+.++.+|
T Consensus 59 ~~~l~~~~a~~~g~~~~-~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y--~~~~~~~G~~~~~v~~~~~~~~d 135 (351)
T PRK01688 59 PKAVIENYAAYAGVKPE-QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--SVSAETIGVEIRTVPTLDNWQLD 135 (351)
T ss_pred hHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHH--HHHHHHcCCEEEEeecCCCCCCC
Confidence 46899999999998765 49999999999999999988887 8999999976543 35678899999999998778899
Q ss_pred hHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee---c-cCcccceEEEec
Q 015729 123 LDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---R-MDEWGIDVALTG 198 (401)
Q Consensus 123 ~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~---~-~~~~~~di~~~s 198 (401)
++++++++. +++++++++|+||||.+.+.+++.++++..+.+++||+|++|....... + .......+++.|
T Consensus 136 ~~~l~~~~~-----~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rS 210 (351)
T PRK01688 136 LPAIADNLD-----GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRT 210 (351)
T ss_pred HHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEec
Confidence 999998773 4689999999999999999998888887633468999999986443111 1 122345688899
Q ss_pred CCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.+|++ |.+| +|+++++++.++.+..... +++.+.....++.++++.-..+.+++.++
T Consensus 211 fSK~~-glaGlRiGy~i~~~~~i~~l~~~~~--------------------~~~v~~~~~~~a~~~L~~~~~~~~~~~~~ 269 (351)
T PRK01688 211 LSKAF-ALAGLRCGFTLANEEVINLLLKVIA--------------------PYPLSTPVADIAAQALSPQGIAAMRERVA 269 (351)
T ss_pred chHhh-cCHHHHHhHHhCCHHHHHHHHhccC--------------------CCCCCHHHHHHHHHHHhcchHHHHHHHHH
Confidence 99988 4555 5999999998877764321 11233322222223332110112456667
Q ss_pred HHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-CCCcEEEEeecccC
Q 015729 277 RHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHLGHL 354 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-~~~~~~Ri~~~~~~ 354 (401)
++.+.++++.+.|+++ +++...+. ...++++.++ +..++.+.|.++ ||.++.+... ...+++||++.
T Consensus 270 ~~~~~r~~l~~~L~~~~~~~~~~ps----~~nfi~~~~~---~~~~l~~~L~~~-gi~vr~~~~~~~~~~~iRis~~--- 338 (351)
T PRK01688 270 EINANRQWLIAALKEIPCVEQVFDS----ETNYILARFT---ASSAVFKSLWDQ-GIILRDQNKQPGLSNCLRITIG--- 338 (351)
T ss_pred HHHHHHHHHHHHHHhCCCCCeECCC----CCcEEEEEcC---CHHHHHHHHHHC-CeEEEECCCcCCCCCeEEEeCC---
Confidence 7778888999999887 65422221 2346777774 567899999866 9999876432 23568999754
Q ss_pred CHHHHHHHHHHHH
Q 015729 355 NELQLLGCLAGVE 367 (401)
Q Consensus 355 ~~~di~~~~~~i~ 367 (401)
+++|.++++++|+
T Consensus 339 ~~~e~~~l~~al~ 351 (351)
T PRK01688 339 TREECQRVIDALR 351 (351)
T ss_pred CHHHHHHHHHhhC
Confidence 6899999998873
No 144
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=7.4e-26 Score=213.89 Aligned_cols=334 Identities=15% Similarity=0.102 Sum_probs=229.5
Q ss_pred CCCCCCCCcccccCCCcCChHHHHHHHccCc-------CCCCCcc----HHHHHHHHHHHHHHHhcCCCCceEEecCChh
Q 015729 2 DYMYAPGKNHLFVPGPVHIPDQVIRAMNRNN-------EDYRSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGT 70 (401)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~-------~~~~~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t 70 (401)
++..+..+.||..+..+++.+++.+++.++. .+..+.. ..+...++++.+++++|.+. .++.++|+
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---~l~~~sG~ 81 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---AFIVPSGY 81 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---EEEECChH
Confidence 4667889999999999999999999998873 2222222 56789999999999999864 34555566
Q ss_pred HHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC--CCceEEEEEecCC
Q 015729 71 GAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNET 148 (401)
Q Consensus 71 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~--~~~~~i~~~~~~n 148 (401)
.|+..++..+.+++|.|++....|.+.. ... +......+.++ ..|++++++++++... +.+.++++++++|
T Consensus 82 ~a~~~~~~~~~~~~d~ii~d~~~H~sv~-~~~-~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s 154 (370)
T PRK05937 82 MANLGLCAHLSSVTDYVLWDEQVHISVV-YSL-SVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYS 154 (370)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHH-HHH-HHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCC
Confidence 7776655555567777777667666554 222 22222222222 3489999999874210 1345778899999
Q ss_pred CcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccC----ccc---ceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 149 ATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD----EWG---IDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 149 ~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~----~~~---~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
++|.+.|+++|.++|++ +|+++++|++|+.|.+..+.. .++ .++++.|.+|.+ |+.|.|+++. ++....
T Consensus 155 ~~G~i~pl~eI~~l~~~--~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~-~~~~~~ 230 (370)
T PRK05937 155 FKGTLAPLEQIIALSKK--YHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSS-SEVKQD 230 (370)
T ss_pred CCCCccCHHHHHHHHHH--cCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcC-HHHHHH
Confidence 99999999999999999 999999999999886654431 122 236677888987 5778776655 554333
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (401)
+..... .. .+..+.++..++++.++++.+.+.+ +..+++..++.+++.+.|...+ .
T Consensus 231 ~~~~~~-~~---------------~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-----~-- 286 (370)
T PRK05937 231 LMLNSP-PL---------------RYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA-----P-- 286 (370)
T ss_pred HHHhCC-CC---------------eecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-----C--
Confidence 321100 00 0122355666788899999887766 5567777788887777664321 0
Q ss_pred ccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCCCcc
Q 015729 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLG 380 (401)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~~~~ 380 (401)
. ....+.++ +.+..++.+.|.++ ||.+.....+ ..+.+||++..++|++|+|+++++|++++++++.-+-.+
T Consensus 287 ---~-~~~~i~~~-~~~~~~~~~~L~~~-gi~v~~~~~~-~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~~~~~ 358 (370)
T PRK05937 287 ---G-CVQPIFLP-GISEQELYSKLVET-GIRVGVVCFP-TGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQKNVVIG 358 (370)
T ss_pred ---C-CEEEEEeC-ChhHHHHHHHHHHC-CeeEEeeCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 0 11234553 34567788888766 9988754333 345799999999999999999999999998876654443
No 145
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=2.3e-26 Score=215.41 Aligned_cols=317 Identities=13% Similarity=0.045 Sum_probs=214.4
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|..+++.+++++.+.......+.......++++.+++++| + .++++++|||+|+..++.+++++||+|+++.+.|+
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g-~--~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~ 82 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG-K--EAALFVPSGTAANQLALAAHTQPGGSVICHETAHI 82 (338)
T ss_pred cCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC-C--CeEEEecCchHHHHHHHHHhcCCCCeEEEecCcce
Confidence 36667888999988744322233345678899999999999 2 24888899999999999999999999999999877
Q ss_pred hHHHH-HHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC---CCCceEEEEEecCCCccccc---chHHHHHHhhhcCC
Q 015729 96 SLLWI-DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT---AHTIKAICIVHNETATGVTN---NLSKVRKLLDEYRH 168 (401)
Q Consensus 96 ~~~~~-~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~---~~~~~~i~~~~~~n~tG~~~---~l~~i~~l~~~~~~ 168 (401)
+.... ..++..|++++.++.+. +.+|++++++++++.. .++++++++++++|+ |.++ ++++|.++|++ +
T Consensus 83 ~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~--~ 158 (338)
T cd06502 83 YTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKE--N 158 (338)
T ss_pred eeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHH--c
Confidence 64311 23455799999998765 5689999999987421 125799999999997 5443 56778999999 9
Q ss_pred CcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 169 PALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 169 ~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
|+++|+|++|..+.. .......++|+++.|.||+++ .+|.++++.++++.+.+..... .+
T Consensus 159 ~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~-~~~g~~~~~~~~~~~~~~~~~~------------~~-- 223 (338)
T cd06502 159 GLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGG-APVGAVVVGNRDFIARARRRRK------------QA-- 223 (338)
T ss_pred CCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCC-CccceEEECCHHHHHHHHHHHH------------Hh--
Confidence 999999998743311 111112468899999999995 4443566778888776653210 00
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC-CHHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI-NSSEI 322 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 322 (401)
+. ..+.+.. ++.+++..+...++.+..+++.++++++.+.|+++|+.+..+ ..+ ++.+..+.+. ...++
T Consensus 224 ~~--~~~~~~~---~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~-~~~v~~~~~~~~~~~l 293 (338)
T cd06502 224 GG--GMRQSGF---LAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLESEV----QTN-IVLLDPVEANAVFVEL 293 (338)
T ss_pred CC--ChhhHHH---HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCcccc----cCC-eEEEecCCccHHHHHH
Confidence 10 1112222 223333333333456677888889999999999987754332 233 4455553221 11233
Q ss_pred HHHHHh--hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 323 VRRAWQ--RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 323 ~~~L~~--~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+.+.+ +.|+.+.+.. .+++||++...++++|++++++++++
T Consensus 294 ~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 294 SKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 333321 3488876542 27899999988899999999999864
No 146
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=4.8e-26 Score=220.84 Aligned_cols=312 Identities=13% Similarity=0.078 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~ 116 (401)
..+...++++.+++++|.+..+ +.+++|+|++++.++.++ +.+||+|+++.+.|+++. +..+++..|++++.++.+
T Consensus 110 ~~~~~~e~~~~la~l~g~~~~~-v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~ 188 (447)
T PRK00451 110 TLQAIFEYQTMICELTGMDVAN-ASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE 188 (447)
T ss_pred HHHHHHHHHHHHHHHhCCCcce-EEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC
Confidence 4455777888999999998654 889999999999888776 478999999999887765 334456689999999998
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE--ecccccCcceeccCcccceE
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV--DGVSSICAIDFRMDEWGIDV 194 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~--D~a~~~~~~~~~~~~~~~di 194 (401)
++ .+|++++++++++ ++++++++++ |+||.+.|+++|.++|++ +|+++++ |.. +.+... ...++++|+
T Consensus 189 ~~-~~d~~~l~~~i~~----~t~~v~l~~p-n~tG~v~~l~~I~~~a~~--~~~~~iv~~d~~-~~g~~~-~~~~~~~D~ 258 (447)
T PRK00451 189 DG-VTDLEALEAAVDD----DTAAVVVQYP-NFFGVIEDLEEIAEIAHA--GGALFIVGVDPV-SLGLLK-PPGEYGADI 258 (447)
T ss_pred CC-CCCHHHHHHhcCC----CeEEEEEECC-CCCCeeCCHHHHHHHHHH--CCCEEEEEcChH-HhccCC-CcccCCCCE
Confidence 77 8999999999974 5699999987 899999999999999999 9999998 544 334332 235678999
Q ss_pred EEecCCCc-----ccCCCcceEEEecHHHHHHhccCCCCc---------cccch--HHHHHHhhcCCCCCCCCcHHHHHH
Q 015729 195 ALTGSQKA-----LSLPTGMGIVCASPKALEASKTAKSVR---------VFFDW--KDYIKFYNLGTFWPYTPSIQLLYG 258 (401)
Q Consensus 195 ~~~s~~K~-----l~g~~g~G~l~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~g~~~~~~~~~~~~~a 258 (401)
+++|++|+ + +++|+|++++++++.+.+.+..... +...+ .....+++.++....++......+
T Consensus 259 ~~~s~~k~~~~~~~-~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 337 (447)
T PRK00451 259 VVGEGQPLGIPLSF-GGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALA 337 (447)
T ss_pred EEECCCcCCCCCCC-CCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHH
Confidence 99999885 4 4558999999999888764321100 00000 011112223331122222222233
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEc-c
Q 015729 259 LRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG-L 336 (401)
Q Consensus 259 ~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~-~ 336 (401)
...+++.+.+.|++++.+++.++++++++.|+++ |+++.. +. ....+.+.++ .+..+++++|.++ ||... +
T Consensus 338 aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~--~~~~~~v~~~--~~~~~~~~~L~~~-gi~~~~~ 410 (447)
T PRK00451 338 AAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD--GP--FFNEFVVRLP--KPAEEVNEALLEK-GILGGYD 410 (447)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC--CC--eEEEEEEecC--CCHHHHHHHHHhc-CCCCCcc
Confidence 3334555666789999999999999999999997 677652 11 1112334543 3578999999876 66532 1
Q ss_pred C--CCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 337 G--LNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 337 g--~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+ +.+...+++|+++..++|++|+++++++|++++
T Consensus 411 ~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 411 LGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 1 112224689999888889999999999998764
No 147
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.96 E-value=2.5e-26 Score=219.69 Aligned_cols=321 Identities=15% Similarity=0.103 Sum_probs=212.0
Q ss_pred CcCChHHHHHHHccCcCC------CCCccHHHHHHHHHHHHHHHh---cCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 17 PVHIPDQVIRAMNRNNED------YRSPAVPALTKTLLEDIKKIF---KTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~---g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
+.++++.+.+++.+.... ...+.......++++.+++++ +.++ +++++++|+++++..+ ..++.+||+|
T Consensus 44 ~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~-d~I~it~Ga~~al~~l-~~l~~~gd~V 121 (402)
T TIGR03542 44 TQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDP-EEIFISDGAKCDVFRL-QSLFGSDNTV 121 (402)
T ss_pred CCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCH-HHEEECCCcHHHHHHH-HHhcCCCCEE
Confidence 345667777776653321 123434456778999999876 4444 5599999999999875 4567899999
Q ss_pred EEEcCCcchHHHHHHHHHcCC-----------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-
Q 015729 88 ISFLIGQFSLLWIDQQQRLNF-----------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~- 155 (401)
++++|+|+.+. ..++..|+ +++.++++....++++. ++ . ++++++++++|+||||.+++
T Consensus 122 lv~~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~---~---~~~~~i~l~nP~NPTG~~~s~ 192 (402)
T TIGR03542 122 AVQDPVYPAYV--DSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDL-PE---E---PKIDIIYLCSPNNPTGTVLTK 192 (402)
T ss_pred EEeCCCCcchH--HHHHHcCCccccccccccceEEEeecchhhCCCCCc-cc---c---CCceEEEEeCCCCCCCccCCH
Confidence 99999877553 56778898 88888876543333332 11 1 35799999999999999998
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCcc----eec---cCc-ccceEEEecCCCccc-CCCcceEEEecHHHHHHhcc
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICAI----DFR---MDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~~----~~~---~~~-~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~ 224 (401)
+++|.++|++ +|++||+|++|..... +.. ... ....+++.|.+|.++ .+.++|++++++++......
T Consensus 193 ~~~~~l~~~a~~--~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~ 270 (402)
T TIGR03542 193 EQLKELVDYANE--HGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGH 270 (402)
T ss_pred HHHHHHHHHHHH--cCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchh
Confidence 6678888888 9999999999874321 111 111 124577899999884 33457999998886511100
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG---LENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (401)
.. ......... .. .++.+... +.++...+.... +.+.++.++++++.+.+.|++.|+++..+
T Consensus 271 ~~-------~~~~~~~~~-~~--~~~~s~~~---q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-- 335 (402)
T TIGR03542 271 SV-------IQDWERRQC-TK--FNGASYPV---QRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKVYGG-- 335 (402)
T ss_pred hH-------HHHHHHHhh-hc--ccCCCHHH---HHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCceecCC--
Confidence 00 000000000 10 11233322 222333332211 34556777888888999998877655432
Q ss_pred ccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
..+.++|+++|+..++.++...|.++.||.+.+|.. ....+++||++.. +++++++++++|+++
T Consensus 336 --~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 336 --EHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG--KRENIVEACERIKEA 401 (402)
T ss_pred --CceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHhh
Confidence 234588899987777889999988767999999853 2235789998654 789999999999875
No 148
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.96 E-value=2e-25 Score=210.77 Aligned_cols=333 Identities=14% Similarity=0.078 Sum_probs=236.2
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCC--------Cc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR--------SP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~--------~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
....++|+=-.+++.|++++.....+.+ .+ ....+...+.++..++||.+... +-..||+.|+..+
T Consensus 50 ~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~an--vqp~Sg~~An~~v 127 (493)
T PRK13580 50 SSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAY--VQPHSGADANLVA 127 (493)
T ss_pred cCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCccc--ccCCCcHHHHHHH
Confidence 4567778888889999999988443211 11 13344556788889999988743 4467889999999
Q ss_pred HhccCCC-------------------------------CCeEEEEcCCc---chHHHHHHHHHcCCcEEEEeCCC-CCCC
Q 015729 77 LTNTLSP-------------------------------GDRIISFLIGQ---FSLLWIDQQQRLNFNVDVVESDW-GEGA 121 (401)
Q Consensus 77 ~~~~~~~-------------------------------gd~vl~~~~~~---~~~~~~~~~~~~g~~~~~v~~~~-~~~~ 121 (401)
..++++| ||+|+..+..+ .++.+..-......+.+..+++. .+.+
T Consensus 128 ~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~i 207 (493)
T PRK13580 128 FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLL 207 (493)
T ss_pred HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCcc
Confidence 9998876 79999887633 22221111111123455555554 4679
Q ss_pred ChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccC------cccceEE
Q 015729 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD------EWGIDVA 195 (401)
Q Consensus 122 d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~------~~~~di~ 195 (401)
|++++++.+.+ +++.+++++.+|. |...|+++|.++|++ +|+++++|++|+.|.+..+.. ..++|++
T Consensus 208 D~d~l~~~~~~----~~plvii~g~S~~-~~~~dl~~i~eia~~--~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~v 280 (493)
T PRK13580 208 DYDEIAALARE----FKPLILVAGYSAY-PRRVNFAKLREIADE--VGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIV 280 (493)
T ss_pred CHHHHHHHHhh----cCCEEEEeCcccc-CCCcCHHHHHHHHHH--cCCEEEEECchhhceeccccchhhcCCCCCCcEE
Confidence 99999999985 4477888888887 557799999999999 999999999999987653331 1368999
Q ss_pred EecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 196 LTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 196 ~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
++|.||+|.||.| |++++++++.+.+.... . +..+++....+++...++..+.+.+++..+
T Consensus 281 tgT~hKaL~GP~G-G~I~~~~~l~~~L~~a~--P----------------~i~gg~l~p~iAA~avAl~e~~~~ef~~y~ 341 (493)
T PRK13580 281 TTTTHKTLRGPRG-GLVLAKKEYADAVDKGC--P----------------LVLGGPLPHVMAAKAVALAEARTPEFQKYA 341 (493)
T ss_pred EeCChhhccCCCe-EEEEecHHHHHHHhhCC--C----------------cccCCCccHHHHHHHHHHHHHhCccHHHHH
Confidence 9999999987876 99999999877773211 1 112234444566666677766655557789
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCC-CCHHHHHHHHHhhCCeEEccCCCCCC------CcEEEE
Q 015729 276 ERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSLGLGLNKVA------GKVFRI 348 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~i~v~~g~~~~~------~~~~Ri 348 (401)
++..+++++|++.|.+.|+.+.... ....++.+.+.+. .....+.+.|.+. ||.+.....|.. ...+||
T Consensus 342 ~~l~~Na~~La~~L~~~G~~vv~gg---TdshIV~V~lg~~~~~g~~a~~~L~e~-GI~vn~i~~Ptvp~g~~~~srLRI 417 (493)
T PRK13580 342 QQVVDNARALAEGFLKRGARLVTGG---TDNHLVLIDVTSFGLTGRQAESALLDA-GIVTNRNSIPSDPNGAWYTSGIRL 417 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCccCCC---CCCCEEEEEeCCHHHHHHHHHHHHHHC-CeEEccccCCCCCCCCCCCceEEe
Confidence 9999999999999999999886421 1235666777432 2234666677665 999876543321 345999
Q ss_pred eecc----cCCHHHHHHHHHHHHHHHHhc
Q 015729 349 GHLG----HLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 349 ~~~~----~~~~~di~~~~~~i~~~l~~~ 373 (401)
++.. .++++|++++++.|.++++..
T Consensus 418 g~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 418 GTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred ccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 9887 456999999999999998754
No 149
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.8e-26 Score=216.08 Aligned_cols=323 Identities=17% Similarity=0.150 Sum_probs=218.9
Q ss_pred CChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHhccCCCCCeEEE
Q 015729 19 HIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~ 89 (401)
+.++.+.+++.+.... ...+.......++|+.++++++.. +++++++++|+++++..++.+++.+||+|++
T Consensus 46 ~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli 125 (394)
T PRK06836 46 PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIV 125 (394)
T ss_pred CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Confidence 4567788877653221 112223345667888888887521 3345999999999999999898999999999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchH---HHHHHhhh
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS---KVRKLLDE 165 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~---~i~~l~~~ 165 (401)
++++|..+ ...++..|++++.++.+++ +.+|++++++++++ +++++++++++||||.++|.+ +|.++|++
T Consensus 126 ~~p~~~~~--~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~----~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~ 199 (394)
T PRK06836 126 FAPYFVEY--RFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITP----KTKAVIINSPNNPTGVVYSEETLKALAALLEE 199 (394)
T ss_pred cCCCCccH--HHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCc----CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 99976654 3567788999999998776 57899999999964 579999999999999999855 45666665
Q ss_pred c----CCCcEEEEecccccCcce-----eccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchH
Q 015729 166 Y----RHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (401)
Q Consensus 166 ~----~~~~~li~D~a~~~~~~~-----~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
+ ++|++||+|+++...... .-.......+++.|.+|.++ .+.++|+++++++..+...- .
T Consensus 200 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~----------~ 269 (394)
T PRK06836 200 KSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDL----------V 269 (394)
T ss_pred hhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHH----------H
Confidence 2 269999999998643211 00112335788999999985 34458999998775321100 0
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (401)
........... ....+..... ++...+. .+ ...+++.++++.+.+.|++.|+.+..+ ..+.++|+.+|.
T Consensus 270 ~~~~~~~~~~~-~~~~~~~~q~---~~~~~l~-~~--~~~~~~~~~r~~l~~~L~~~g~~~~~~----~gg~~~~~~~~~ 338 (394)
T PRK06836 270 AALVFANRILG-FVNAPALMQR---VVAKCLD-AT--VDVSIYKRNRDLLYDGLTELGFECVKP----QGAFYLFPKSPE 338 (394)
T ss_pred HHHHHHhhccc-cccCCHHHHH---HHHHHhC-Ch--HHHHHHHHHHHHHHHHHHhCCCEeecC----CceEEEEEeCCC
Confidence 00000000000 0112222222 2222222 22 234567777888888888877765543 245677788765
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 316 HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 316 ~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+..++.+.|.++ ||.+.+|.....++++||++. .++++++.++++|++++++
T Consensus 339 -~~~~~~~~~l~~~-gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 339 -EDDVAFCEKAKKH-NLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred -CCHHHHHHHHHhC-CEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 4778888888655 999999965444678999886 4899999999999999865
No 150
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=3.8e-25 Score=209.76 Aligned_cols=336 Identities=10% Similarity=0.043 Sum_probs=229.4
Q ss_pred CCCCCcccccCCCcCChHHHHHHHccCcCCCC----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 5 YAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 5 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
.+.++.||--.....+-+++++++.++..... .+.......++++++++++|.+. .++.++|+.|+..++.++
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~---al~~~sG~~a~~~~i~~l 78 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTES---AILYSDGASTTSSTVAAF 78 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCc---EEEecCcHHHHHHHHHHh
Confidence 46778888888777788888888887553321 13334578899999999999874 455566666666788889
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHH---HHhcc-------CCCCceEEEEEecCCCc
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLAS---KLAAD-------TAHTIKAICIVHNETAT 150 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~---~~~~~-------~~~~~~~i~~~~~~n~t 150 (401)
+++||.|++.++.|.+... .+...+++++.++.+ |++.+++ .+... ...++++|++..+.|++
T Consensus 79 ~~~GD~Vl~~~~~h~s~~~--~~~l~~~~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~ 151 (392)
T PLN03227 79 AKRGDLLVVDRGVNEALLV--GVSLSRANVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNT 151 (392)
T ss_pred CCCCCEEEEeccccHHHHH--HHHHcCCeEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCC
Confidence 9999999999998887642 234456666666644 3444444 33311 11357899999999999
Q ss_pred ccccchHHHHHHhhhcCCCcEEEEecccccCcce---------eccC-cccceEEEecCCCcccCCCcceEEEecHHHHH
Q 015729 151 GVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMD-EWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (401)
Q Consensus 151 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~-~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~ 220 (401)
|.+.|+++|.++|++ +|+++|+|++|+++..- ++.. ..++|++++|.+|++ ++.| |+++++++..+
T Consensus 152 G~i~~l~~i~~l~~~--~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~g-g~v~~~~~~~~ 227 (392)
T PLN03227 152 GTLAPLKELVALKEE--FHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVG-GMTVGSEEVVD 227 (392)
T ss_pred CcccCHHHHHHHHHH--cCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccC-cEEecCHHHHH
Confidence 999999999999999 99999999999855321 1111 236799999999987 4554 78888888766
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK 300 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 300 (401)
.+.... .+..+..+.++..+++..+++....+ .++..++.+++.+++++.|++.+++.....
T Consensus 228 ~~~~~~----------------~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 289 (392)
T PLN03227 228 HQRLSG----------------SGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKL 289 (392)
T ss_pred HHHHhC----------------cCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 543211 11112233344444555555554433 256888899999999999987554422110
Q ss_pred Cc------cCCceeEEEEcCCCCC---------HHHHHHHHHhhCCeEEcc-CC------CCCCCcEEEEeecccCCHHH
Q 015729 301 EE------WFSDTVTAVIVPSHIN---------SSEIVRRAWQRYNLSLGL-GL------NKVAGKVFRIGHLGHLNELQ 358 (401)
Q Consensus 301 ~~------~~~~~~~~~~~~~~~~---------~~~l~~~L~~~~~i~v~~-g~------~~~~~~~~Ri~~~~~~~~~d 358 (401)
.. .....++.+.+.+... ..++++.|.++ |+.+.+ +. ...+...+|++.+..+|++|
T Consensus 290 rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ee 368 (392)
T PLN03227 290 RNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVVANASHTRED 368 (392)
T ss_pred ccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHC-CCEEEecccccCCcCCCCCCceEEEEecCCCCHHH
Confidence 00 0123466677743211 24788888876 888753 21 11224569999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 015729 359 LLGCLAGVEMILKDV 373 (401)
Q Consensus 359 i~~~~~~i~~~l~~~ 373 (401)
+|+++++|+++++++
T Consensus 369 i~~~~~~l~~~~~~~ 383 (392)
T PLN03227 369 IDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998765
No 151
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=6.2e-26 Score=230.95 Aligned_cols=319 Identities=13% Similarity=0.044 Sum_probs=232.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChh----HHHHHHHhccCCC-CC----eEEEEcCCcchHHHHHHHHHcCCcE
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGT----GAWESALTNTLSP-GD----RIISFLIGQFSLLWIDQQQRLNFNV 110 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t----~a~~~~~~~~~~~-gd----~vl~~~~~~~~~~~~~~~~~~g~~~ 110 (401)
+.+.+.++++.+++++|.+. +.|+++++ +|+..++.+++++ || .|+++..+|.++. ..+...|+++
T Consensus 566 ~~~~~~~~r~~la~i~g~~~---v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~--a~a~~~G~~v 640 (993)
T PLN02414 566 YQEMFEDLGDLLCEITGFDS---FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNP--ASAAMCGMKI 640 (993)
T ss_pred HHHHHHHHHHHHHHHhCCCe---EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCH--HHHHHCCCEE
Confidence 55678899999999999944 99999999 8999999888866 87 7888888888775 2344579999
Q ss_pred EEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCc-ceeccCc
Q 015729 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA-IDFRMDE 189 (401)
Q Consensus 111 ~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~-~~~~~~~ 189 (401)
+.++++.++.+|+++|++++++.+ +++++|++++++|.+|...|+++|.++|++ +|+++++|+++..+. ...+..+
T Consensus 641 v~v~~d~~G~vDle~L~~~i~~~~-~~ta~V~vt~pSn~gg~e~~I~eI~~iah~--~Galv~vDgAq~~a~~~l~~p~~ 717 (993)
T PLN02414 641 VVVGTDAKGNINIEELRKAAEAHK-DNLAALMVTYPSTHGVYEEGIDEICDIIHD--NGGQVYMDGANMNAQVGLTSPGF 717 (993)
T ss_pred EEeccCCCCCcCHHHHHHHHhccC-CCeEEEEEECCCccccccchHHHHHHHHHH--cCCEEEEEecCHHhccCcCCccc
Confidence 999999888999999999998644 367999999999999999999999999999 999999999998765 3445567
Q ss_pred ccceEEEecCCCcccCC-----CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcH---HHHHHHHH
Q 015729 190 WGIDVALTGSQKALSLP-----TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSI---QLLYGLRA 261 (401)
Q Consensus 190 ~~~di~~~s~~K~l~g~-----~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~a~~~ 261 (401)
+|+|++.+|.||+|++| +|+|++++++++...+......... ...++.. +.+.++.+. .+...+..
T Consensus 718 ~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~----~~~~r~~--~s~iGt~~~a~~g~al~l~~ 791 (993)
T PLN02414 718 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTG----GIPRPEK--TQPLGTISAAPWGSALILPI 791 (993)
T ss_pred cCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCC----CcccccC--CCCcCCccchhhhhHHHHHH
Confidence 89999999999999855 5589999999876666543211000 0001111 111223222 22234455
Q ss_pred HHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEE-cCC--CCCHHHHHHHHHhhCCeEE
Q 015729 262 ALDLIFE---EGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI-VPS--HINSSEIVRRAWQRYNLSL 334 (401)
Q Consensus 262 al~~~~~---~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~~L~~~~~i~v 334 (401)
++.++.. +|+++..++...++.|+++.|.+. ++.+..+.+....-.++.+. +|+ +++..++.++|.+ +||..
T Consensus 792 A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d-~Giha 870 (993)
T PLN02414 792 SYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMD-YGFHA 870 (993)
T ss_pred HHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHH-cCcEE
Confidence 5555544 456677889999999999999873 33332221111111122222 221 4677899999984 58865
Q ss_pred ccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 335 GLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 335 ~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
.....+ ..+.+||++..+.+++|+|++++++..+.+++.
T Consensus 871 pt~~~p-v~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 871 PTMSWP-VPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred eeeccc-cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 432223 367899999999999999999999998887763
No 152
>PLN02231 alanine transaminase
Probab=99.95 E-value=1.9e-25 Score=218.10 Aligned_cols=335 Identities=12% Similarity=0.025 Sum_probs=225.9
Q ss_pred cccccCCCcCChHHHHHHHccCcC-----CCCCccHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHhc
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNE-----DYRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~-----~~~~~~~~~~~~~l~~~la~~~g----~~-~~~~i~~~~g~t~a~~~~~~~ 79 (401)
...+.+++...|..+++...+... ....|.......++|+.+++++. .+ .+++|++|+|+++|+..++..
T Consensus 131 ~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~ 210 (534)
T PLN02231 131 LLDKSETHGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQL 210 (534)
T ss_pred cCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHH
Confidence 345566766666666655554221 12234455667788888888773 32 345699999999999999988
Q ss_pred cC-CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCC--CCceEEEEEecCCCccccc
Q 015729 80 TL-SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTN 154 (401)
Q Consensus 80 ~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~--~~~~~i~~~~~~n~tG~~~ 154 (401)
++ .+||.|+++.|.|+.+. ..++..|++++.++++++ +.+|+++|++++++... .+++++++++|+||||.++
T Consensus 211 l~~~~gd~Vli~~P~Y~~y~--~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl 288 (534)
T PLN02231 211 LIRSEKDGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL 288 (534)
T ss_pred hccCCCCEEEEeCCCChhHH--HHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC
Confidence 87 47999999999877654 556778999999998754 68899999999864211 1579999999999999999
Q ss_pred c---hHHHHHHhhhcCCCcEEEEecccccCcc----ee-ccC---------ccc-ceEEEecCCCcccC--CCcceEEEe
Q 015729 155 N---LSKVRKLLDEYRHPALFLVDGVSSICAI----DF-RMD---------EWG-IDVALTGSQKALSL--PTGMGIVCA 214 (401)
Q Consensus 155 ~---l~~i~~l~~~~~~~~~li~D~a~~~~~~----~~-~~~---------~~~-~di~~~s~~K~l~g--~~g~G~l~~ 214 (401)
+ +++|+++|++ +|++||+|++|..... .+ .+. ... ..+++.|.+|.+.+ +.++||+.+
T Consensus 289 s~e~l~~Iv~~a~~--~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 289 AEENQRDIVEFCKQ--EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred CHHHHHHHHHHHHH--cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence 6 5678889999 9999999999864321 10 110 011 24667899997754 344699876
Q ss_pred ---cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHH-------HHHH--hcHHHHHHHHHHHH
Q 015729 215 ---SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD-------LIFE--EGLENVIERHRRLG 282 (401)
Q Consensus 215 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~-------~~~~--~g~~~~~~~~~~~~ 282 (401)
++++.+.+..... . ...++....+++..++. .+.. ...+.+++.+.+++
T Consensus 367 ~~~~~~l~~~l~k~~~-------------~------~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~ 427 (534)
T PLN02231 367 TGFTSDVREQIYKVAS-------------V------NLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRA 427 (534)
T ss_pred ecCCHHHHHHHHHHHh-------------h------hcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 5777666543210 0 00133333333333331 1111 01234577888999
Q ss_pred HHHHHHHHHc-CCccccCCCccCCceeEEEEc--CCC-C---------CHHHHHHHHHhhCCeEEccCCCCC--C-CcEE
Q 015729 283 KATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV--PSH-I---------NSSEIVRRAWQRYNLSLGLGLNKV--A-GKVF 346 (401)
Q Consensus 283 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~~-~---------~~~~l~~~L~~~~~i~v~~g~~~~--~-~~~~ 346 (401)
+.+.+.|+++ |+.+..++ .+.++|..+ |.+ + +...++..|+++.||.+.||.... . ..++
T Consensus 428 ~~l~~~L~~~~gi~~~~p~----Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~ 503 (534)
T PLN02231 428 KTLEDALNSLEGVTCNKAE----GAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHF 503 (534)
T ss_pred HHHHHHHhcCCCceecCCC----eeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeE
Confidence 9999999987 87776543 445666333 321 1 233466777777799999995432 2 2359
Q ss_pred EEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 347 RIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 347 Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
|+++. .++++++.++++|+++++++
T Consensus 504 Rit~~--~~~e~l~eal~RL~~~~~~~ 528 (534)
T PLN02231 504 RCTIL--PQEDKIPAIVSRLTEFHKSF 528 (534)
T ss_pred EEEeC--CCHHHHHHHHHHHHHHHHHH
Confidence 99874 48999999999999888764
No 153
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=7.7e-26 Score=214.08 Aligned_cols=312 Identities=14% Similarity=0.048 Sum_probs=204.4
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHH----hcCC-CCceEEecCChhHHHHHHHhccC--CCCCeEEE
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKI----FKTT-SGTPFLIPTTGTGAWESALTNTL--SPGDRIIS 89 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~----~g~~-~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~ 89 (401)
|.+.++.+.+++.+.......+.......++|+.++++ +|.+ .++++++|+|+++|+..++..++ ++||.|++
T Consensus 35 ~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv 114 (374)
T PRK05839 35 QFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAY 114 (374)
T ss_pred CCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEE
Confidence 34556778888776432222233233344566666544 4643 44569999999999988877654 57899999
Q ss_pred EcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhc
Q 015729 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEY 166 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~ 166 (401)
+.|+|+.+. ..++..|++++.++.+.++.++++..+..+ ++++++++++|+||||.+++. ++|.++|++
T Consensus 115 ~~P~y~~~~--~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~-----~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~- 186 (374)
T PRK05839 115 PNPFYQIYE--GAAIASRAKVLLMPLTKENDFTPSLNEKEL-----QEVDLVILNSPNNPTGRTLSLEELIEWVKLALK- 186 (374)
T ss_pred CCCCchhhH--HHHHhcCCEEEEeecccccCCcCCcchhhh-----ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHH-
Confidence 999776553 456788999999999765444444333333 247999999999999999975 557777888
Q ss_pred CCCcEEEEecccccCcc--e----ec------cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 167 RHPALFLVDGVSSICAI--D----FR------MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~--~----~~------~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
+|++||+|+++..... + .. .......+++.|.+|.++ .+.++|+++.++++.+++.....
T Consensus 187 -~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~------ 259 (374)
T PRK05839 187 -HDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAYRT------ 259 (374)
T ss_pred -cCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHHHh------
Confidence 9999999999874221 0 01 012235688899999863 33457999999888776643210
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (401)
++....+.....++.+++. .+..+++.++++.++++.+.+.| ++. .+ ..+.++|+++
T Consensus 260 ------------~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l---~~~--~p----~gg~fi~~~~ 316 (374)
T PRK05839 260 ------------YLGCASPLPLQKAAAVAWL--DDEHAEFFRNIYAKNLKLAREIL---GIT--IP----PATFYVWLPV 316 (374)
T ss_pred ------------hcCCCCChHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHhc---CCC--CC----CeeEEEEEeC
Confidence 0011233322233333332 12225566666777766655544 443 11 2456888888
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCC----CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLNKV----AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~~~----~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+ +..+++..|.+++||.+.+|.... ..+++||++.. +++++++++++|+++++
T Consensus 317 ~---~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 317 D---NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred C---ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 5 457888888765699999984321 24789998854 79999999999998874
No 154
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.95 E-value=3.4e-25 Score=212.77 Aligned_cols=321 Identities=12% Similarity=0.054 Sum_probs=221.1
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL 98 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~ 98 (401)
.+.++.++++.... ..|.....+.++++.++++++.+. +++|+||++|+..++.++++||| |+++++ |+..+
T Consensus 58 a~~~a~~~a~~~g~---~~Y~~~~g~~~Lreaia~~~~~~~---vv~t~ggt~A~~~~~~all~pGD-Vii~~p-~~~~~ 129 (460)
T PRK13238 58 AMSDRQWAAMMRGD---EAYAGSRSYYRLEDAVKDIFGYPY---TIPTHQGRAAEQILFPVLIKKGD-VVPSNY-HFDTT 129 (460)
T ss_pred hhhHHHHHHHHhCC---cccCCCCCHHHHHHHHHHHhCCCc---EEECCCHHHHHHHHHHHhCCCCC-EEccCC-cccch
Confidence 45666666665422 223344567799999999998865 89999999999999999999999 887777 44433
Q ss_pred HHHHHHHcCCcEEEEeCCC----------CCCCChHHHHHHHhccCCCCceEEEEEecCCCcc-cccc---hHHHHHHhh
Q 015729 99 WIDQQQRLNFNVDVVESDW----------GEGAKLDVLASKLAADTAHTIKAICIVHNETATG-VTNN---LSKVRKLLD 164 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~----------~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG-~~~~---l~~i~~l~~ 164 (401)
....+..|++++.+++++ .+.+|+++|++.+.+.+.+++++|++++++||+| .+++ +++|.++|+
T Consensus 130 -~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~ 208 (460)
T PRK13238 130 -RAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAK 208 (460)
T ss_pred -HHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHH
Confidence 244567899999999853 2359999999999864324689999999999998 7765 568999999
Q ss_pred hcCCCcEEEEecccccCccee-----------ccCc------ccceEEEecCCCcccCCCcceEEEec-HHHHHHhccCC
Q 015729 165 EYRHPALFLVDGVSSICAIDF-----------RMDE------WGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAK 226 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~~~-----------~~~~------~~~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~ 226 (401)
+ +|++||+|+++......+ .... -..|++++|++|.+.++.| |+++.+ +++.+++....
T Consensus 209 ~--~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~ 285 (460)
T PRK13238 209 K--YGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLC 285 (460)
T ss_pred H--cCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhcc
Confidence 9 999999999886431111 1110 1379999999998777766 888888 46777665432
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
.. ..|..+.+..+...+.++..++....+. ...++..+++++|.+.|++.|+++..+.+ +
T Consensus 286 ~~-------------~~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~~~~~~~l~~~L~~~G~~~~~p~G----g 345 (460)
T PRK13238 286 IL-------------YEGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYRIGQVEYLGEGLEEAGVPIQTPAG----G 345 (460)
T ss_pred cc-------------cCCcccccCcHHHHHHHHHhhHHHhhCh---HHHHHHHHHHHHHHHHHHHCCCCeEccCC----c
Confidence 10 0011011123333334444444432222 23333344678999999999999887543 2
Q ss_pred eeEEEEcCC--------CCCHHHHHHHHHhhCCeEEccCCC------CCC-------CcEEEEeecc-cCCHHHHHHHHH
Q 015729 307 TVTAVIVPS--------HINSSEIVRRAWQRYNLSLGLGLN------KVA-------GKVFRIGHLG-HLNELQLLGCLA 364 (401)
Q Consensus 307 ~~~~~~~~~--------~~~~~~l~~~L~~~~~i~v~~g~~------~~~-------~~~~Ri~~~~-~~~~~di~~~~~ 364 (401)
+.+.+.+.+ +.+..+++.+|.++.||.+.++.. +.. ...+|+++.- ..|.+.+|.+.+
T Consensus 346 ~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~ 425 (460)
T PRK13238 346 HAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAE 425 (460)
T ss_pred eEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHH
Confidence 445555521 224678999999888999877632 111 2569997653 458999999999
Q ss_pred HHHHHHH
Q 015729 365 GVEMILK 371 (401)
Q Consensus 365 ~i~~~l~ 371 (401)
+|+++.+
T Consensus 426 ~l~~~~~ 432 (460)
T PRK13238 426 ALKAVKE 432 (460)
T ss_pred HHHHHHH
Confidence 9998874
No 155
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=5.7e-26 Score=213.60 Aligned_cols=281 Identities=15% Similarity=0.149 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAK 122 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 122 (401)
..++++.+++++|.++++ +++++|+++++..++.+++.+| |+|+++.|.|..+ ...++..|++++.++.+.++.+|
T Consensus 62 ~~~Lr~aia~~~~~~~~~-I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y--~~~~~~~g~~v~~v~~~~~~~~~ 138 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQ-ILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMY--AISAETFNVGVKALPLTADYQLP 138 (354)
T ss_pred HHHHHHHHHHHhCcCHHH-EEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHH--HHHHHHcCCEEEEEecCCCCCCC
Confidence 578999999999987654 9999999999999999988888 8999999976543 35678899999999998777788
Q ss_pred hHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee---cc-CcccceEEEec
Q 015729 123 LDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---RM-DEWGIDVALTG 198 (401)
Q Consensus 123 ~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~---~~-~~~~~di~~~s 198 (401)
++.++. + .+++++++++|+||||.+++.+++.++++.+ .+++||+|++|....... +. .....-+++.|
T Consensus 139 ~~~l~~-~-----~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~-~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S 211 (354)
T PRK04635 139 LDYIEQ-L-----DGAKLVFICNPNNPTGTVIDRADIEQLIEMT-PDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRT 211 (354)
T ss_pred HHHHHh-c-----cCCCEEEEeCCCCCCCccCCHHHHHHHHHhC-CCcEEEEeCchHhhccCcchHHHHhhCCCEEEEec
Confidence 988873 3 2579999999999999999999999999874 259999999986432111 11 11223477889
Q ss_pred CCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc---HHHH
Q 015729 199 SQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG---LENV 274 (401)
Q Consensus 199 ~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g---~~~~ 274 (401)
.+|+++ ++.++|++++++++.+.+..... +++.+.. .+.+++..+...+ +++.
T Consensus 212 ~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~--------------------~~~~~~~---~~~~a~~~l~~~~~~~~~~~ 268 (354)
T PRK04635 212 LSKAFALAGARCGFTLANEELIEILMRVIA--------------------PYPVPLP---VSEIATQALSEAGLARMKFQ 268 (354)
T ss_pred hHHHhhhhHHHHhhhhCCHHHHHHHHhhcC--------------------CCCCCHH---HHHHHHHHHhcccHHHHHHH
Confidence 999984 23347999999998877653211 1112222 2233344443333 3445
Q ss_pred HHHHHHHHHHHHHHHHHcC-CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeeccc
Q 015729 275 IERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH 353 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~ 353 (401)
++++.++++.+.+.|++++ +++..+ . +.++++.++ +..++.+.|.++ ||.++.+.....++++||++.
T Consensus 269 ~~~~~~~r~~l~~~L~~~~~~~~~~~----~-g~f~~~~~~---~~~~~~~~l~~~-gv~v~~~~~~~~~~~lRis~~-- 337 (354)
T PRK04635 269 VLDLNAQGARLQAALSMYGGAKVLEG----N-GNYVLAKFD---DVDAVFKALWDA-GIVARAYKDPRLANCIRFSFS-- 337 (354)
T ss_pred HHHHHHHHHHHHHHHHhCCCceECCC----C-CcEEEEECC---CHHHHHHHHHHC-CEEEEECCCCCCCCeEEEEeC--
Confidence 6667788888999998874 665543 1 246777775 467888878655 999986643333568999853
Q ss_pred CCHHHHHHHHHHHHHH
Q 015729 354 LNELQLLGCLAGVEMI 369 (401)
Q Consensus 354 ~~~~di~~~~~~i~~~ 369 (401)
+.+|++++++++++-
T Consensus 338 -~~e~~~~l~~al~~~ 352 (354)
T PRK04635 338 -NRAETDKLIGLIRNQ 352 (354)
T ss_pred -CHHHHHHHHHHHHHh
Confidence 789999999999753
No 156
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.8e-25 Score=209.35 Aligned_cols=287 Identities=13% Similarity=0.093 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC---CC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW---GE 119 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~ 119 (401)
..++++.+++++|.++. ++++++|+++++..++.+++.+| |+|++++|. ++.+ ...++..|++++.++.+. +.
T Consensus 61 ~~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~-y~~~-~~~~~~~g~~~~~v~~~~~~~~~ 137 (364)
T PRK04781 61 PPGLRSALAALYGCAPE-QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPV-FGMY-AVCARLQNAPLVEVPLVDGADGF 137 (364)
T ss_pred HHHHHHHHHHHhCcChH-HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCC-hHHH-HHHHHHcCCEEEEEecCCCccCC
Confidence 47999999999998764 59999999999999999888888 788988885 3332 355677899999999742 23
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee---c-cCcccceEE
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---R-MDEWGIDVA 195 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~---~-~~~~~~di~ 195 (401)
.+|++++++.+.. ++++++++++|+||||.+++.+++.++++...++++||+|+++....... . .+.....++
T Consensus 138 ~~d~~~l~~~~~~---~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~ 214 (364)
T PRK04781 138 HADVPAIVAAALA---SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAV 214 (364)
T ss_pred CcCHHHHHHHHhc---cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEE
Confidence 5688888665532 46799999999999999999999999888744689999999987433211 1 122234688
Q ss_pred EecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh---cH
Q 015729 196 LTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE---GL 271 (401)
Q Consensus 196 ~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~---g~ 271 (401)
+.|.+|.++ .+.++|+++.++++++.+...+. +++.+..... .+...+... .+
T Consensus 215 ~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~--------------------~~~~~~~~~~---~a~~~l~~~~~~~~ 271 (364)
T PRK04781 215 LRTLSKAHALAAARIGSLIANAELIAVLRRCQA--------------------PYPVPTPCAA---LAEQALSAPALAVT 271 (364)
T ss_pred EecChhhcccccceeeeeeCCHHHHHHHHhccC--------------------CCCCCHHHHH---HHHHHHhcccHHHH
Confidence 899999985 34457999999999887764321 1123332222 233333322 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC-CCCCcEEEEe
Q 015729 272 ENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN-KVAGKVFRIG 349 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~-~~~~~~~Ri~ 349 (401)
.+..+++.++++.+.+.|+++ |+....+ ..+.+++++++ +..++.+.|.++ ||.|+++.. ...++++||+
T Consensus 272 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~~g~f~~~~~~---~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~Ris 343 (364)
T PRK04781 272 ARRVAEVRAERERLHAALAQLPGVRRVYP----SQGNFLLVRFD---DAEAAFQALLAA-GVVVRDQRAAPRLSDALRIT 343 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeECC----CCCcEEEEEcC---CHHHHHHHHHHC-CeEEeeCCCCCCCCCeEEEe
Confidence 455666788888999999887 6542222 13457888885 467888888765 999998843 2235789997
Q ss_pred ecccCCHHHHHHHHHHHHHHH
Q 015729 350 HLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 350 ~~~~~~~~di~~~~~~i~~~l 370 (401)
+. +.++.++++++|+++.
T Consensus 344 ~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 344 LG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred CC---CHHHHHHHHHHHHHHH
Confidence 54 6889999999998764
No 157
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.3e-25 Score=196.36 Aligned_cols=333 Identities=13% Similarity=0.057 Sum_probs=237.5
Q ss_pred cCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
.+.++.+.+|+.+...+ +.+|.+.......|++++++++.+ .++++++|+|+++|++.++.++.+||.+|+++
T Consensus 77 ~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlP 156 (447)
T KOG0259|consen 77 FRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLP 156 (447)
T ss_pred ccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecC
Confidence 34456666666664433 345666677889999999997754 34669999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeC--CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
.||++-+. ..+...|++++..++ +.+|.+|++.+|..++++| .++++.+|+||.|.+++ +++|+++|++
T Consensus 157 rPGfp~Y~--~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT----~AivviNP~NPcGnVys~~HL~kiae~A~k 230 (447)
T KOG0259|consen 157 RPGFPLYD--TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT----VAIVVINPNNPCGNVYSEDHLKKIAETAKK 230 (447)
T ss_pred CCCCchHH--HhhhhcCceeEeecccCcccceechHHHHHhhccCe----eEEEEeCCCCCCcccccHHHHHHHHHHHHH
Confidence 99977543 567888999999887 3468899999999999755 99999999999999996 7889999999
Q ss_pred cCCCcEEEEecccccCc---cee----ccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 166 YRHPALFLVDGVSSICA---IDF----RMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~---~~~----~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
++++||.|+.|.... -+| .+...-+.+.+++.+|.+..|. .+||++..+.. ..+...+ . + ..
T Consensus 231 --lgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~-gvf~~~~---~---~-q~ 300 (447)
T KOG0259|consen 231 --LGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPR-GVFRDTK---V---V-QG 300 (447)
T ss_pred --hCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEeccc-ccccchH---H---H-HH
Confidence 999999999976322 222 2233346788889999885442 58999987653 0111100 0 0 00
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC--
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP-- 314 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-- 314 (401)
...+..- ...|+..-..|+..-|+..-++-+++...-.+.+.+...+.|.++ ++..... ++ +.++++++++
T Consensus 301 ~~~~~~~---~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~k-Pe--g~mylmv~l~~s 374 (447)
T KOG0259|consen 301 IKNFLDI---IPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVK-PE--GCMYLMVKLNLS 374 (447)
T ss_pred HHHHHhc---cCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcC-CC--cceEEEeccchh
Confidence 1111111 112444333333333333223347888888999999999999997 6663332 22 3356667653
Q ss_pred ---CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 315 ---SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 315 ---~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+-.+..++++.|..+..+.+-||......+|+|+++.. ..+.+++++.+|++.+.+..
T Consensus 375 ~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~--~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 375 LFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV--EEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred hhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc--ChHHHHHHHHHHHHHHHhhh
Confidence 22356689999887669999999766678999997754 88999999999999987764
No 158
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=3.1e-25 Score=209.27 Aligned_cols=330 Identities=13% Similarity=0.056 Sum_probs=240.6
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCCCC----ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
+.++.++.||--..-..+.+++.+++.+++....+ .+......++++.|++++|.+. .++.++|..|+..++.
T Consensus 104 ~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~---all~sSGy~AN~~~i~ 180 (476)
T PLN02955 104 LLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED---CLVCPTGFAANMAAMV 180 (476)
T ss_pred EEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc---EEEECChHHHHHHHHH
Confidence 45677788888887777788888888887654321 3345677899999999999887 7788889999988886
Q ss_pred ccC--------------CCCCeEEEEcCCcchHHHH-HHHHHc-CCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEE
Q 015729 79 NTL--------------SPGDRIISFLIGQFSLLWI-DQQQRL-NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAIC 142 (401)
Q Consensus 79 ~~~--------------~~gd~vl~~~~~~~~~~~~-~~~~~~-g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~ 142 (401)
++. .++|.|+.....|.|...+ .+++.. ++++..++.+ |++.|++++++.+ .+.++|+
T Consensus 181 aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~-~~~~~Vv 254 (476)
T PLN02955 181 AIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCK-MKRKVVV 254 (476)
T ss_pred HHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCC-CCceEEE
Confidence 652 3445566665666666522 122222 4666666644 8999999997654 3456788
Q ss_pred EEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee---------ccCcccceEEEecCCCcccCCCcceEEE
Q 015729 143 IVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---------RMDEWGIDVALTGSQKALSLPTGMGIVC 213 (401)
Q Consensus 143 ~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~~di~~~s~~K~l~g~~g~G~l~ 213 (401)
+....++.|.+.|+++|.++|++ +|+++|+|++|+.|.+-. +.. ..+|+++.|.+|.+ |..| |+++
T Consensus 255 ~EgV~SmdGdiapL~eL~~L~~~--~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~-G~~G-Gfi~ 329 (476)
T PLN02955 255 TDSLFSMDGDFAPMEELSQLRKK--YGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAA-GCHG-GFIA 329 (476)
T ss_pred EeCCCCCCCCcCCHHHHHHHHHH--cCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccch-hccC-ceee
Confidence 88889999999999999999999 999999999999775422 111 35789999999998 4555 8999
Q ss_pred ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC
Q 015729 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG 293 (401)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g 293 (401)
++++..+.+..... ...+....++..+++..++++.+.++ ...+++++++.+++++. +|
T Consensus 330 gs~~~~~~l~~~~~----------------~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~G 388 (476)
T PLN02955 330 CSKKWKQLIQSRGR----------------SFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---SG 388 (476)
T ss_pred cHHHHHHHHHHhCC----------------CCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---cC
Confidence 99988776664322 11123346666777788888877654 45778888888888873 35
Q ss_pred CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 294 LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.+ .+ +++.+.+++...+.++.+.|+++ ||.+.+..+|. ....+||++.+.+|++||++++++|.+++
T Consensus 389 ~~~-------~s-PI~pI~ig~~~~a~~~~~~L~~~-Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~ 459 (476)
T PLN02955 389 VDI-------SS-PIISLVVGNQEKALKASRYLLKS-GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCL 459 (476)
T ss_pred CCC-------CC-CEEEEEeCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHH
Confidence 543 13 35666665554566789999877 99988776542 22359999999999999999999999998
Q ss_pred HhcCCC
Q 015729 371 KDVGYP 376 (401)
Q Consensus 371 ~~~~~~ 376 (401)
+..+..
T Consensus 460 ~~~~~~ 465 (476)
T PLN02955 460 DFDNTA 465 (476)
T ss_pred hhhcce
Confidence 766553
No 159
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.95 E-value=1.6e-25 Score=211.06 Aligned_cols=309 Identities=14% Similarity=0.093 Sum_probs=211.8
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.|.++++.+++++.+.......+.... ..++++.++++++.+++ ++++++|+++++..++.++ .+||+|++++|+|+
T Consensus 32 n~~~~~~~~~~a~~~~~~~~~~Y~~~~-~~~Lr~aia~~~~v~~~-~I~it~G~~~~i~~~~~~l-~~g~~vlv~~P~y~ 108 (360)
T PRK07392 32 NPLGPPESVIAAIQSALSALRHYPDPD-YRELRLALAQHHQLPPE-WILPGNGAAELLTWAGREL-AQLRAVYLITPAFG 108 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCcC-HHHHHHHHHHHhCcChh-hEEECCCHHHHHHHHHHHh-CCCCeEEEECCCcH
Confidence 356777888888776433222222222 46899999999988764 4999999999999888775 46889999999766
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCCC-----CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCc
Q 015729 96 SLLWIDQQQRLNFNVDVVESDWGEG-----AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA 170 (401)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~-----~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~ 170 (401)
.+. ..++..|++++.++.+.++. .+++++++.. .+++++++++|+||||.+++.++|.+++++ +++
T Consensus 109 ~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~--~~~ 179 (360)
T PRK07392 109 DYR--RALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-----TPNDGLLLNNPHNPTGKLWSREAILPLLEQ--FAL 179 (360)
T ss_pred HHH--HHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-----cCCCEEEEeCCCCCCCCCcCHHHHHHHHHH--CCE
Confidence 553 66788999999999876543 2455554432 256899999999999999999999999999 775
Q ss_pred EEEEecccccCcce------ec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhh
Q 015729 171 LFLVDGVSSICAID------FR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 171 ~li~D~a~~~~~~~------~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
+|+|++|...... .. .......+++.|.+|.++ .+.++|+++++++.++.+.....
T Consensus 180 -~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~--------------- 243 (360)
T PRK07392 180 -VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD--------------- 243 (360)
T ss_pred -EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC---------------
Confidence 6669998643211 00 112234688899999995 45567999999988776643210
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHH
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSS 320 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (401)
.++.+.....++.++++ +.. .+..++.++++++.+.+.|+++ |+.+.. ....+++++++. +..
T Consensus 244 -----~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-----~~~~fl~~~~~~--~~~ 308 (360)
T PRK07392 244 -----PWPVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLP-----SAANFLLVQSQG--SAL 308 (360)
T ss_pred -----CCCCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-----CCCCEEEEEcCC--CHH
Confidence 12344544444444443 222 3344566777888888999876 665543 123467777753 677
Q ss_pred HHHHHHHhhCCeEEccCCCCC--CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 321 EIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 321 ~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++...+.+++||.+.+|.... ..+++||++.. .++.+++.++++.++
T Consensus 309 ~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~l~~al~~~~ 357 (360)
T PRK07392 309 QLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT---EAENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC---HHHHHHHHHHHHHHh
Confidence 888887666699999995432 34689997654 444566666665554
No 160
>PLN02672 methionine S-methyltransferase
Probab=99.95 E-value=6e-25 Score=224.22 Aligned_cols=322 Identities=14% Similarity=0.114 Sum_probs=226.8
Q ss_pred CCcCChHHHHHHHccCcCC-CCCccHHHHHHHHHHHHHHHhcCCCC--ceEEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 16 GPVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSG--TPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~g~~~~--~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
.|.++++.+++++.+.... .......+....+++.+++.+|.+.. +++++++|+++++..++.+++++||+|+++.|
T Consensus 707 ~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~P 786 (1082)
T PLN02672 707 SFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAG 786 (1082)
T ss_pred CCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 3667778888887763321 12223445678899999998888643 46999999999999998999999999999999
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecC-CCcccccc---hHHHHHHhhhc
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNE-TATGVTNN---LSKVRKLLDEY 166 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~-n~tG~~~~---l~~i~~l~~~~ 166 (401)
.|+.+. ..++..|++++.++++. +..+|++++++++++. +.+.+++++|+ ||||.+++ +++|.++|++
T Consensus 787 tY~~Y~--~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~---~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k- 860 (1082)
T PLN02672 787 SNGTYV--SAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV---KKPWVYISGPTINPTGLLYSNSEIEEILSVCAK- 860 (1082)
T ss_pred ChHHHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC---CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHH-
Confidence 766554 56788899999999864 4577889999998641 23578888887 99999997 5567888888
Q ss_pred CCCcEEEEecccccCccee------cc-------Cc---ccceEEEecCCCcccCCCc--ceEEEecHH-HHHHhccCCC
Q 015729 167 RHPALFLVDGVSSICAIDF------RM-------DE---WGIDVALTGSQKALSLPTG--MGIVCASPK-ALEASKTAKS 227 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~------~~-------~~---~~~di~~~s~~K~l~g~~g--~G~l~~~~~-~~~~~~~~~~ 227 (401)
+|++||+|++|+...... +. .. -...+++.|.+|.++ .+| +||++++++ +.+.+.....
T Consensus 861 -~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~-lpGLRIGylIap~~eLi~~l~~~~~ 938 (1082)
T PLN02672 861 -YGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL-SGGHEFGFLALNDSVLIDAFHSAPG 938 (1082)
T ss_pred -cCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc-cHHHHheeEEeCCHHHHHHHHHhhh
Confidence 999999999986322110 00 00 013567889998773 544 699998654 6666643210
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH------HhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF------EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~------~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (401)
. . .+......++.+++.... ...+++.++.++++++++.+.|++.|+++..+
T Consensus 939 -------------~--s-----~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~P-- 996 (1082)
T PLN02672 939 -------------L--S-----RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEP-- 996 (1082)
T ss_pred -------------h--c-----CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecC--
Confidence 0 0 011122233444443332 11245667778999999999999888876654
Q ss_pred ccCCceeEEEEcCC-----------------CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHH
Q 015729 302 EWFSDTVTAVIVPS-----------------HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLA 364 (401)
Q Consensus 302 ~~~~~~~~~~~~~~-----------------~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~ 364 (401)
..+.++|+.++. +.+..++++.|.++.||.+.+|.....++++||++.. ++++++++++
T Consensus 997 --eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~--~~e~LeeALe 1072 (1082)
T PLN02672 997 --QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL--EDSEFDRALK 1072 (1082)
T ss_pred --CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC--CHHHHHHHHH
Confidence 345566665420 2467889999998779999999554446799998765 8889999999
Q ss_pred HHHHHHH
Q 015729 365 GVEMILK 371 (401)
Q Consensus 365 ~i~~~l~ 371 (401)
+|++.++
T Consensus 1073 rL~kf~~ 1079 (1082)
T PLN02672 1073 AIARFKE 1079 (1082)
T ss_pred HHHHHHH
Confidence 9988664
No 161
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=4.8e-25 Score=210.51 Aligned_cols=334 Identities=14% Similarity=0.100 Sum_probs=221.4
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCCCcc--------HHHHHHHHHH----HHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPA--------VPALTKTLLE----DIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~--------~~~~~~~l~~----~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
+..++.|+--.++|.|++++......+++.+ -.+...++++ ++++++|.+.. +++++||+.|+..+
T Consensus 29 ~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~a--lv~~~SG~~A~~~~ 106 (416)
T PRK13034 29 DHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYA--NVQPHSGSQANGAV 106 (416)
T ss_pred cCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCce--EEecCCcHHHHHHH
Confidence 3455566666679999999988642222210 1245666776 99999998762 35678999999999
Q ss_pred HhccCCCCCeEEEEcCCcchHHH-HHHHHHcCCcE--EEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 77 LTNTLSPGDRIISFLIGQFSLLW-IDQQQRLNFNV--DVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 77 ~~~~~~~gd~vl~~~~~~~~~~~-~~~~~~~g~~~--~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+.+++++||+|++....|.+... +......+... ..++.+. .+.+|++++++.++. .++++|++.. ..+|.
T Consensus 107 l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~klVi~~~--~~~g~ 181 (416)
T PRK13034 107 YLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKE---HKPKLIIAGF--SAYPR 181 (416)
T ss_pred HHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhh---cCCeEEEECC--Ccccc
Confidence 99999999999999988776321 10000112222 2333332 345899999998864 3567777654 34678
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccC---cccceEEEecCCCcccCCCcceEEEecHHH-HHHhccCCCC
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD---EWGIDVALTGSQKALSLPTGMGIVCASPKA-LEASKTAKSV 228 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~di~~~s~~K~l~g~~g~G~l~~~~~~-~~~~~~~~~~ 228 (401)
..|+++|.++|++ +|+++++|++|++|....+.. -.++|++++|.||+++|+.| |+++++++. ..++......
T Consensus 182 ~~dl~~l~~la~~--~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~~~~ 258 (416)
T PRK13034 182 ELDFARFREIADE--VGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSAVFP 258 (416)
T ss_pred ccCHHHHHHHHHH--cCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhhcCC
Confidence 8899999999999 999999999999887543221 12589999999999987777 766665543 3333321100
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCcee
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (401)
+ +..++.+..++++..++....+.+..+.+++.+++++++++.|+++|+++..+.. .+ .+
T Consensus 259 ---------------~--~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~--~t-~i 318 (416)
T PRK13034 259 ---------------G--LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGGT--DN-HL 318 (416)
T ss_pred ---------------c--ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCC--CC-cE
Confidence 1 0112333333444434443332334567899999999999999998988764211 12 34
Q ss_pred EEEEcCC-CCCHHHHHHHHHhhCCeEEccC------CCCCCCcEEEEeecc----cCCHHHHHHHHHHHHHHHHhc
Q 015729 309 TAVIVPS-HINSSEIVRRAWQRYNLSLGLG------LNKVAGKVFRIGHLG----HLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 309 ~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g------~~~~~~~~~Ri~~~~----~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+.+.+ +.+...+.+.|.++ ||.+..- ..+.....+|++++. .++++|+++++++|++++.+.
T Consensus 319 ~~v~~~~~~~~~~~~~~~L~~~-GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 319 LLVDLRPKGLSGKDAEQALERA-GITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred EEEEcCCCCCCHHHHHHHHHhC-CcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 5555533 44556677778655 9988752 122224469999877 677999999999999999865
No 162
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=3e-25 Score=206.71 Aligned_cols=278 Identities=12% Similarity=0.092 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCC
Q 015729 43 LTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAK 122 (401)
Q Consensus 43 ~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 122 (401)
...+|++.+++++|.++.+ |++++|+++++..++. ++++| +|+++.|+|+.+ ...++..|++++.++++.. ..|
T Consensus 41 ~~~~lr~~ia~~~~~~~~~-I~it~Gs~~~l~~~~~-~~~~~-~vv~~~P~y~~y--~~~~~~~G~~v~~vp~~~~-~~~ 114 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIK-VLIGPGLTHFIYRLLS-YINVG-NIIIVEPNFNEY--KGYAFTHGIRISALPFNLI-NNN 114 (332)
T ss_pred CHHHHHHHHHHHhCCCcce-EEECCCHHHHHHHHHH-HhCCC-cEEEeCCChHHH--HHHHHHcCCeEEEEeCCcc-cCc
Confidence 4679999999999998655 9999999999998886 46776 577778865544 4678889999999998753 345
Q ss_pred hHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcCCCcEEEEecccccCcce-----ec-cCcccce
Q 015729 123 LDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAID-----FR-MDEWGID 193 (401)
Q Consensus 123 ~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~~-----~~-~~~~~~d 193 (401)
++.+++ .+++++++++|+||||.+++. ++|.++|++ ++++||+|+++...... .. .......
T Consensus 115 ~~~l~~-------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~--~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~v 185 (332)
T PRK06425 115 PEILNN-------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRK--KGALLFIDEAFIDFVPNRAEEDVLLNRSYGNV 185 (332)
T ss_pred HHHHhh-------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHH--cCCEEEEecchhccccccchhHHHHhccCCCE
Confidence 554432 257899999999999999985 456667777 99999999998643211 01 1122356
Q ss_pred EEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-HhcH
Q 015729 194 VALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-EEGL 271 (401)
Q Consensus 194 i~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-~~g~ 271 (401)
+++.|.+|.++ .+..+|++++++++++.+..... +++.+.. ++ +++.... ....
T Consensus 186 i~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~--------------------~~~~~~~---~~-~~l~~~~~~~~~ 241 (332)
T PRK06425 186 IIGRSLTKILGIPSLRIGYIATDDYNMKISRKITE--------------------PWSVCDP---AI-DFIRSIDLDYVA 241 (332)
T ss_pred EEEeecHHhcCCchhhheeeecCHHHHHHHHHcCC--------------------CCccCHH---HH-HHHHHhhhHHHH
Confidence 88899999985 34457999999998877764311 1112221 11 1122111 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEe
Q 015729 272 ENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIG 349 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~ 349 (401)
++.++.+++.++.+.+.|+++|+.+..+. .+.++++.+| +..++.+.|.++ ||.++++... ..++++||+
T Consensus 242 ~~~~~~~~~~r~~l~~~L~~~g~~~~~~~----~g~f~~~~~~---~~~~~~~~l~~~-gi~v~~~~~f~~~~~~~iRis 313 (332)
T PRK06425 242 KHSLDIMENERSYLINNLEAMGFRAAGDP----SANFITFMIP---DAHDFYSYLLKN-GILVRLLDDYECLGEQYIRIA 313 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEECCCC----CceEEEEEcC---CHHHHHHHHHHC-CeEEEECCCCCCCCCCEEEEE
Confidence 56788888999999999998887654321 2346778875 578899999876 9999998543 224689997
Q ss_pred ecccCCHHHHHHHHHHHHHHH
Q 015729 350 HLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 350 ~~~~~~~~di~~~~~~i~~~l 370 (401)
+. +.++.++++++|++++
T Consensus 314 ~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 314 IR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred eC---CHHHHHHHHHHHHHHh
Confidence 54 6889999999998765
No 163
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=1e-24 Score=204.83 Aligned_cols=307 Identities=11% Similarity=0.117 Sum_probs=213.3
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
|...++.+++++.+.......+.. ....++|+.++++++.+++ ++++++|+++++..++.++ .+ ++|+++.|+|+.
T Consensus 30 ~~~~p~~~~~a~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~ 105 (354)
T PRK06358 30 PLGVPESLKQAITENLDKLVEYPD-PDYLELRKRIASFEQLDLE-NVILGNGATELIFNIVKVT-KP-KKVLILAPTFAE 105 (354)
T ss_pred CCCCCHHHHHHHHHHHHhhhcCCC-ccHHHHHHHHHHHhCCChh-hEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHH
Confidence 445678888888774322222221 2367999999999998764 4999999999999888774 44 689999997664
Q ss_pred HHHHHHHHHcCCcEEEEeCCCC--CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcE
Q 015729 97 LLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPAL 171 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~ 171 (401)
+ ...++..|++++.++.+.+ +.+| +++.+.+. .+++++++++|+||||.+++ +++|.++|++ ++++
T Consensus 106 ~--~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~----~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~--~~~~ 176 (354)
T PRK06358 106 Y--ERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK----EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEK--RNIY 176 (354)
T ss_pred H--HHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc----cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHh--cCCE
Confidence 4 3567888999999998654 3577 55555554 35799999999999999997 5667778888 9999
Q ss_pred EEEecccccCcce------e-ccCcccceEEEecCCCccc-CCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhh
Q 015729 172 FLVDGVSSICAID------F-RMDEWGIDVALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 172 li~D~a~~~~~~~------~-~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
||+|+++...... + ........+++.|.+|.++ .+.++|++++. +.+.+.+.....
T Consensus 177 ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--------------- 241 (354)
T PRK06358 177 LIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--------------- 241 (354)
T ss_pred EEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC---------------
Confidence 9999998643211 0 1122234688899999985 44567999874 566665543211
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHH
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
.++.+.....++..+++. ...+++.++.+.++++.+.+.|.+. |+.+..+ .. .++++++|+ ..+
T Consensus 242 -----~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~----~g-~f~~~~~~~---~~~ 306 (354)
T PRK06358 242 -----PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP----SV-NFIFFKLEK---PID 306 (354)
T ss_pred -----CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC----cc-eEEEEEcCc---hHH
Confidence 112333333334444421 1124667778888889999999886 6555543 23 377788863 478
Q ss_pred HHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 322 IVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.+.|.++ ||.+.++... ..++++||++. ++++.++++++++.++
T Consensus 307 ~~~~l~~~-gI~v~~~~~f~~~~~~~iRls~~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 307 LRKELLKK-GILIRSCSNYRGLDENYYRVAVK---SREDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHC-CeEEEECCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 88998875 9999998543 23468999743 6889999999998764
No 164
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.95 E-value=2.6e-25 Score=210.37 Aligned_cols=307 Identities=14% Similarity=0.164 Sum_probs=220.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
.....++++.+++++|.+. +++++|||+|+.+++.++ +++||+|+++.+.|++.. ..+...|++++.++++.++
T Consensus 32 g~~~~~le~~la~~~g~~~---~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~--~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 32 GPKNQALEQAFCQLTGNQH---AIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTL--NMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred CHhHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHH--HHHHHcCCEEEEEecCCCc
Confidence 3567899999999999864 788899999999999887 899999999999877664 4567789999999988654
Q ss_pred -CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee--ccCcccceEEE
Q 015729 120 -GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF--RMDEWGIDVAL 196 (401)
Q Consensus 120 -~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~di~~ 196 (401)
.+|++++++++++ ++++|+.+ +++|...|+++|.++|++ +|+++|+|++|+.|.... .....+.+++.
T Consensus 107 ~~~d~~~l~~~i~~----~tkav~~~---~~~G~~~d~~~i~~~a~~--~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~S 177 (379)
T PRK11658 107 LMVTPEAIEAAITP----RTKAIIPV---HYAGAPADLDAIRAIGER--YGIPVIEDAAHAVGTYYKGRHIGARGTAIFS 177 (379)
T ss_pred CCcCHHHHHHhccc----CCeEEEEe---CCCCCcCCHHHHHHHHHH--cCCeEEEECCCccCCeECCeecCCCCCEEEe
Confidence 6899999999874 56887744 468999999999999999 999999999999876543 23455678889
Q ss_pred ecCCCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHH--------HHhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 015729 197 TGSQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYI--------KFYNLGTFWPYTPSIQLLYGLRAALDLIF 267 (401)
Q Consensus 197 ~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~a~~~al~~~~ 267 (401)
++.+|.+.++.| |+++.+ +++.+++......+...+..... ..+..|. +.. +..+.+|+...+
T Consensus 178 f~~~K~l~~g~G-G~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~----n~~---~~~l~AAl~~~q 249 (379)
T PRK11658 178 FHAIKNITCAEG-GLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGY----KYN---LADINAAIALVQ 249 (379)
T ss_pred CCCCCcCcccCc-eEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeecccc----ccC---cCHHHHHHHHHH
Confidence 999999977665 666654 77776665432211111100000 0011121 121 246677888777
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCC-ccCCceeEEEEcCC---CCCHHHHHHHHHhhCCeEEccCCCCC-
Q 015729 268 EEGLENVIERHRRLGKATRLAVEAWGLKNC-TQKE-EWFSDTVTAVIVPS---HINSSEIVRRAWQRYNLSLGLGLNKV- 341 (401)
Q Consensus 268 ~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~-~~~~~~~~~~~~~~---~~~~~~l~~~L~~~~~i~v~~g~~~~- 341 (401)
..++++..++.+++++++.+.|.+++.... .+.. ....+....+.++. +.+.+++.+.|.++ ||.++..+.+.
T Consensus 250 l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-gI~~~~~~~~~~ 328 (379)
T PRK11658 250 LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKER-GIGTGLHFRAAH 328 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHC-CCCCcccCcCcc
Confidence 778899999999999999999987743322 2221 12234455566642 35788999999865 88765332100
Q ss_pred --------------------CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 342 --------------------AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 342 --------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
....+.+.++...+++|++++++.|++++
T Consensus 329 ~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 329 TQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred cChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 11347776777889999999999999875
No 165
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=2.2e-24 Score=207.58 Aligned_cols=348 Identities=16% Similarity=0.136 Sum_probs=237.5
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCC--------C---Ccc-HHHHHHHHHHHHHHHhcCCCCceEEe---cCChhHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY--------R---SPA-VPALTKTLLEDIKKIFKTTSGTPFLI---PTTGTGAW 73 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~--------~---~~~-~~~~~~~l~~~la~~~g~~~~~~i~~---~~g~t~a~ 73 (401)
....++|+=-.+++.|++++....... + +.. ..++...++++..+.|+.+... +.+ +.+|+.|+
T Consensus 35 ~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~-~~~nv~~~SG~~AN 113 (475)
T PLN03226 35 KGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEK-WGVNVQPLSGSPAN 113 (475)
T ss_pred cCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcce-eEEecCcCchHHHH
Confidence 456677777788888988887744111 1 111 2222333455677888887644 222 47899999
Q ss_pred HHHHhccCCCCCeEEEEcC---CcchHHHHHHH-HHcCCc--EE--EEeCC-CCCCCChHHHHHHHhccCCCCceEEEEE
Q 015729 74 ESALTNTLSPGDRIISFLI---GQFSLLWIDQQ-QRLNFN--VD--VVESD-WGEGAKLDVLASKLAADTAHTIKAICIV 144 (401)
Q Consensus 74 ~~~~~~~~~~gd~vl~~~~---~~~~~~~~~~~-~~~g~~--~~--~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~ 144 (401)
..++.++++|||+|+..+. +|.++.+.... +..+.. +. ....+ .++.+|++++++.+.+ .++++|++.
T Consensus 114 ~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~---~~pklIv~~ 190 (475)
T PLN03226 114 FAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAML---FRPKLIIAG 190 (475)
T ss_pred HHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhh---cCCeEEEEe
Confidence 9999999999999998543 55655421111 111121 12 22223 3567899999999875 356766553
Q ss_pred ecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCc---ccceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDE---WGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 145 ~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
.+.+|...|+++|.++|++ +|+++++|++|+.|....+... .++|+++++.||||.||.| |+++++++..+.
T Consensus 191 --~S~~s~~~D~a~i~~ia~~--~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~~ 265 (475)
T PLN03226 191 --ASAYPRDWDYARMRKIADK--VGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIFFRKGPKPP 265 (475)
T ss_pred --cCcCCCccCHHHHHHHHHH--cCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEEEchhhccc
Confidence 3447888999999999999 9999999999999876544221 2699999999999988998 899988876544
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (401)
+.+. ...+.++....+. .....+.++++...++++.++++.+.+.+++...++..++++++++.|.+.|+++.....
T Consensus 266 ~~~g--~~~~~d~~~~i~~-a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t 342 (475)
T PLN03226 266 KGQG--EGAVYDYEDKINF-AVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGT 342 (475)
T ss_pred ccCC--CccHHHHHHHhcc-ccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCC
Confidence 3221 1111122111110 001112345788889999999999988888889999999999999999999999876422
Q ss_pred ccCCceeEEEEc-CCCCCHHHHHHHHHhhCCeEEccCCC-----CCCCcEEEEeec----ccCCHHHHHHHHHHHHHHHH
Q 015729 302 EWFSDTVTAVIV-PSHINSSEIVRRAWQRYNLSLGLGLN-----KVAGKVFRIGHL----GHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 302 ~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~~i~v~~g~~-----~~~~~~~Ri~~~----~~~~~~di~~~~~~i~~~l~ 371 (401)
. ..++.+.+ +.+++..++.+.|.. .||.+..+.- +.....+|++.. ..++++|++++.+.|.++++
T Consensus 343 ~---~hi~lv~~~~~gi~~~~~~~~L~~-~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 343 D---NHLVLWDLRPLGLTGSRVEKVLDL-AHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred C---CCEEEEEccCCCCCHHHHHHHHHH-CCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 1 24555666 567788888888865 4999876642 123345888643 34578999999999999987
Q ss_pred h
Q 015729 372 D 372 (401)
Q Consensus 372 ~ 372 (401)
.
T Consensus 419 ~ 419 (475)
T PLN03226 419 I 419 (475)
T ss_pred H
Confidence 3
No 166
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.95 E-value=5.6e-25 Score=207.20 Aligned_cols=302 Identities=16% Similarity=0.153 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-C
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-G 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~ 118 (401)
.....++++.+++++|.+. +++++|||+|+..++.++ +++||+|+++.++|++.. ..+...|++++.++.+. +
T Consensus 17 ~~~~~~~~~~la~~~~~~~---~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~ 91 (352)
T cd00616 17 GPKVREFEKAFAEYLGVKY---AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA--NAILLLGATPVFVDIDPDT 91 (352)
T ss_pred CHHHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--HHHHHcCCeEEEEecCCCc
Confidence 3567899999999999743 788889999999999887 689999999999888764 44667899999999987 6
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceecc-CcccceEEEe
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRM-DEWGIDVALT 197 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~di~~~ 197 (401)
+.+|+++++++++ ++++++++++ ++|...|+++|.++|++ +|+++|+|++|+.|....+. .....|+.++
T Consensus 92 ~~~d~~~l~~~i~----~~~~~v~~~~---~~G~~~~~~~i~~l~~~--~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~ 162 (352)
T cd00616 92 YNIDPELIEAAIT----PRTKAIIPVH---LYGNPADMDAIMAIAKR--HGLPVIEDAAQALGATYKGRKVGTFGDAGAF 162 (352)
T ss_pred CCcCHHHHHHhcC----cCCeEEEEEC---CCCCcCCHHHHHHHHHH--cCCeEEEECCCCCCCeECCEEcccCcceeEE
Confidence 6789999999886 3568888764 68999999999999999 99999999999988653221 0112466666
Q ss_pred c--CCCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCC-CCCCCcHHHHHHHHHHHHHHHHhcHHH
Q 015729 198 G--SQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTF-WPYTPSIQLLYGLRAALDLIFEEGLEN 273 (401)
Q Consensus 198 s--~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~a~~~al~~~~~~g~~~ 273 (401)
| .+|++.++.| |+++++ +++.+++............. .+..... +....+ .+.+++......++++
T Consensus 163 S~~~~K~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~aa~~~~~l~~~~~ 232 (352)
T cd00616 163 SFHPTKNLTTGEG-GAVVTNDEELAERARLLRNHGRDRDRF----KYEHEILGYNYRLS-----EIQAAIGLAQLEKLDE 232 (352)
T ss_pred cCCCCCCCcccCc-eEEEECCHHHHHHHHHHHHcCCCCCCC----ccccceeeeccCcC-----HHHHHHHHHHHHhhHH
Confidence 6 5599955554 767665 56666554321100000000 0000000 000111 2223333333335677
Q ss_pred HHHHHHHHHHHHHHHHHHc-CCccccCCCc-cCCceeEEEEcCC--CCCHHHHHHHHHhhCCeEEccCCCCC--------
Q 015729 274 VIERHRRLGKATRLAVEAW-GLKNCTQKEE-WFSDTVTAVIVPS--HINSSEIVRRAWQRYNLSLGLGLNKV-------- 341 (401)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~i~v~~g~~~~-------- 341 (401)
..++.+++.+++++.|.++ |+++....+. ...+.++.+.+++ +.+..++.+.|.++ ||.+...+.+.
T Consensus 233 ~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~-gI~~~~~~~~~~~~~~~~~ 311 (352)
T cd00616 233 IIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEA-GIETRVHYPPLHHQPPYKK 311 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHC-CCCeeeecCccccCHhhhh
Confidence 8888999999999999986 8887654321 2344577777754 67888999999866 88765333211
Q ss_pred ---------------CCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 342 ---------------AGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 342 ---------------~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
..+.+|++++..+|++|+++++++|+
T Consensus 312 ~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 312 LLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 01569999999999999999999874
No 167
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.94 E-value=1.7e-24 Score=201.32 Aligned_cols=306 Identities=14% Similarity=0.109 Sum_probs=211.7
Q ss_pred CCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeE
Q 015729 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (401)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~v 87 (401)
-+.||--..-..+.++..+++.++. +..+...++++.+++++|.++++ +++++||++|+..++.+++++||+|
T Consensus 26 ~~~ylgl~~~~~~~~~~~~~~~~~~------g~~~~~~~Le~~lA~~~g~~~e~-ilv~~gg~~a~~~~~~al~~~gd~V 98 (346)
T TIGR03576 26 LYDLTGLAGGFKIDEEDLELLETYV------GPAIFEEKVQELGREHLGGPEEK-ILVFNRTSSAILATILALEPPGRKV 98 (346)
T ss_pred ccccccCCCChhHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHcCCCcce-EEEECCHHHHHHHHHHHhCCCCCEE
Confidence 3567776766677777777777753 33478889999999999996544 9999999999999999999999999
Q ss_pred EEEc---CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc---cchHHHHH
Q 015729 88 ISFL---IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT---NNLSKVRK 161 (401)
Q Consensus 88 l~~~---~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~---~~l~~i~~ 161 (401)
+++. +.|.++ ...++..|+++... .++++++. . +++++|+++. ++++|.+ .++++|.+
T Consensus 99 li~~~d~p~~~s~--~~~~~l~ga~~~~~-------~~l~~l~~--~----~~~~lIiitg-~s~~G~v~~~~~L~~i~~ 162 (346)
T TIGR03576 99 VHYLPEKPAHPSI--PRSCKLAGAEYFES-------DELSELKK--I----DGTSLVVITG-STMDLKVVSEEDLKRVIK 162 (346)
T ss_pred EECCCCCCCchhH--HHHHHHcCCEEecc-------CCHHHHhh--C----cCceEEEEEC-CCCCCcccCHHHHHHHHH
Confidence 9753 344443 34567778865332 14554432 1 2467777764 6889998 47888999
Q ss_pred HhhhcCCCcEEEEecccccCcce-ec---cCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 162 LLDEYRHPALFLVDGVSSICAID-FR---MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~-~~---~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
+|++ +|+++++|++|+.+... .+ ....+.|+++.|.+|++.|.. .|++++++++++.+.....
T Consensus 163 la~~--~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~---------- 229 (346)
T TIGR03576 163 QAKS--KEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGE---------- 229 (346)
T ss_pred HHHH--cCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhc----------
Confidence 9999 99999999999976432 11 122357899999999886565 5999999998887765321
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (401)
.+..+.+...++++.++++... .+..++.++++.+.+.+.++++ .+..+ ..+ +++++++. .
T Consensus 230 --------~~~~s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~--~~~~~----~~~-f~~~~~~~-~ 290 (346)
T TIGR03576 230 --------QFGLEAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL--NVERT----PTG-FVIKGVEE-E 290 (346)
T ss_pred --------CcccCccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC--CCCcC----CCe-EEEEeCCC-C
Confidence 1122344545566677776432 2455667777777777777743 33321 133 56677743 2
Q ss_pred CHHHHHHHHHhhCCeEEccCCCC-CCCcEEEEeecccCCHH---HHHHHHHHHHHHH
Q 015729 318 NSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHLGHLNEL---QLLGCLAGVEMIL 370 (401)
Q Consensus 318 ~~~~l~~~L~~~~~i~v~~g~~~-~~~~~~Ri~~~~~~~~~---di~~~~~~i~~~l 370 (401)
+..+++..++++.||.+++++.. ..++++||++.. .++ +.+.++++|++.+
T Consensus 291 ~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~--~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 291 KLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAA--KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEec--ChHHhcCHHHHHHHHHhcc
Confidence 34456666666679999998643 236799997765 333 7999999998765
No 168
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=2.2e-24 Score=206.18 Aligned_cols=290 Identities=19% Similarity=0.189 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCC------------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNF------------ 108 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~------------ 108 (401)
....++.+.++++++.+..+.+++++||++|++.++.....+| ++|+..+++||+...... ...|.
T Consensus 85 ~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~ 163 (398)
T PRK03244 85 EPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGAL-ALTGQPAKRAPFEPLPG 163 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHH-hccCCcccccCCCCCCC
Confidence 3446899999999886543569999999999999987544454 567777777777653221 11121
Q ss_pred cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc-
Q 015729 109 NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI- 183 (401)
Q Consensus 109 ~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~- 183 (401)
++..++. .|++++++.+. +++++|+++.++|++|.+.| +++|.++|++ +|+++|+|++|+....
T Consensus 164 ~~~~~~~-----~d~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~--~~~llI~DEv~~g~gr~ 232 (398)
T PRK03244 164 GVEHVPY-----GDVDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDR--HGALLVLDEVQTGIGRT 232 (398)
T ss_pred CceEeCC-----CCHHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCccc
Confidence 2233322 27899998885 36799999999999999987 8899999999 9999999999863211
Q ss_pred ----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHH
Q 015729 184 ----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGL 259 (401)
Q Consensus 184 ----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 259 (401)
.+......+|++++ +|+++++.++|+++.++++.+.+..... + ..++.++..+++.
T Consensus 233 g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~~~~~~~~~~~~----------------~--~t~~~~~~~~aaa 292 (398)
T PRK03244 233 GAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFGPAADLLTPGLH----------------G--STFGGNPVACAAA 292 (398)
T ss_pred chHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcHHHHhhccCCCC----------------c--CCCCCCHHHHHHH
Confidence 11222334787766 4999876778999999998776643211 1 1234556667777
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC
Q 015729 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN 339 (401)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~ 339 (401)
.++++.+.+. +..++..++.+++++.|++++++...... ..+.++++.++.. ...++.+.|.++ ||.+.+.
T Consensus 293 ~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~v~--g~g~~~~i~~~~~-~~~~~~~~l~~~-Gv~~~~~-- 363 (398)
T PRK03244 293 LAVLDTIASE---GLLENAERLGEQLRAGIEALGHPLVDHVR--GRGLLLGIVLTAP-VAKAVEAAAREA-GFLVNAV-- 363 (398)
T ss_pred HHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcCCCceeeEe--eccEEEEEEEecc-HHHHHHHHHHHC-CeEEeec--
Confidence 7887776654 36677888889999999887654322111 2456788888532 466788888876 9998763
Q ss_pred CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 340 KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 340 ~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
..+.+||++...++++|+++++++|+++++++.
T Consensus 364 --~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 364 --APDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred --CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 246899998888999999999999999997653
No 169
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.94 E-value=1.3e-24 Score=209.09 Aligned_cols=298 Identities=18% Similarity=0.115 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEcCCcchHHHHHHHHHc-----------C
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQQRL-----------N 107 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~-----------g 107 (401)
.+...++.+.++++++.+. +.+++++||++|++.++..+ +.++++|++.+++|++.......... .
T Consensus 78 ~~~~~~l~~~l~~~~~~~~-~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T cd00610 78 NEPAVELAELLLALTPEGL-DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLL 156 (413)
T ss_pred CHHHHHHHHHHHHhCCCCC-CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 5678899999999998643 35999999999999988764 46789999999988886532221111 1
Q ss_pred CcEEEEeCCCC------CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecc
Q 015729 108 FNVDVVESDWG------EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 108 ~~~~~v~~~~~------~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a 177 (401)
.+++.++.+.. ...|++.+++.+++.. ++++++++++.++++|.+.+ +++|.++|++ +|+++|+|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~--~~~~li~Dev 233 (413)
T cd00610 157 PGVLHVPYPYRYRPPAELADDLEALEEALEEHP-EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRK--HGILLIADEV 233 (413)
T ss_pred CCcEEeCCCccccchhhHHHHHHHHHHHHhcCC-CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEecc
Confidence 24556665521 2337899999887532 35788888888888999887 8999999999 9999999999
Q ss_pred cccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCc
Q 015729 178 SSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (401)
Q Consensus 178 ~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (401)
|+.... ..+.....+|++++ +|+++++.++|+++.++++.+.+..... .....++.+
T Consensus 234 ~~g~g~~g~~~~~~~~~~~~d~~t~--sK~l~~g~~~g~~~~~~~~~~~~~~~~~----------------~~~~t~~~~ 295 (413)
T cd00610 234 QTGFGRTGKMFAFEHFGVEPDIVTL--GKGLGGGLPLGAVLGREEIMDAFPAGPG----------------LHGGTFGGN 295 (413)
T ss_pred ccCCCcCcchhhHhhcCCCCCeEEE--cccccCccccEEEEEcHHHHHhhccCCC----------------CCCCCCCcC
Confidence 874311 11222234566654 5999876778999999998887611000 001133455
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCC--ccccCCCccCCceeEEEEcCCC--------CCHHHH
Q 015729 253 IQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGL--KNCTQKEEWFSDTVTAVIVPSH--------INSSEI 322 (401)
Q Consensus 253 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l 322 (401)
...++++.++++.+.+. ...++..++.+++++.|+++.. ...... ...+.++++.+++. ....++
T Consensus 296 ~~~~~a~~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 370 (413)
T cd00610 296 PLACAAALAVLEVLEEE---GLLENAAELGEYLRERLRELAEKHPLVGDV--RGRGLMIGIELVKDRATKPPDKELAAKI 370 (413)
T ss_pred HHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCcEEEe--ecCceEEEEEEecCCCcCCcchHHHHHH
Confidence 66677888888887663 4677888888899988887622 222111 12346777777543 345678
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.+.|.++ ||.+.++. ++.+|+++...++++|++++++++++++
T Consensus 371 ~~~l~~~-gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 371 IKAALER-GLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHC-CeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 8888876 99998764 5689999888889999999999998753
No 170
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.5e-24 Score=187.66 Aligned_cols=348 Identities=17% Similarity=0.128 Sum_probs=259.9
Q ss_pred CcccccCCCcCChHHHHHHHcc----Cc----CC---CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNR----NN----ED---YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~----~~----~~---~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
..||.+..=...++++.....+ .+ .. .....+.++-..+-.+++.++|....+ ++++.+.+--+...+
T Consensus 32 viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~E-vvv~dtts~nl~k~L 110 (407)
T COG3844 32 VIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGE-VVVTDTTSINLFKVL 110 (407)
T ss_pred eEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCc-eEEeCCcchHHHHHH
Confidence 6777777644444333332222 11 11 124567777888999999999998876 778888777777777
Q ss_pred hccC--CCCCeEEEEcCCcchHH---HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 78 TNTL--SPGDRIISFLIGQFSLL---WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 78 ~~~~--~~gd~vl~~~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
.+.+ ++|++|+++.-..|+.. ...++...+.. .+-...++|.++++.++. .+.++++++++.-||.
T Consensus 111 ~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~~P~~~~~~~~d----d~AvV~L~~V~y~TGq 181 (407)
T COG3844 111 AAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGVIAPRALEEAITD----DVAVVLLSHVNYKTGQ 181 (407)
T ss_pred HHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceeeeChHHHHHhhcc----ceEEEEeccccccccc
Confidence 6654 45889999987667654 22344444432 333345678899999985 5689999999999999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcc-eEEEecHHHHHHhccCCCCccc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGM-GIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~-G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
..++.+|..++++ +|++++.|-+|+.|..+.+....|+|+.+++++|+++|++|. +++++.++..++..+.....+.
T Consensus 182 l~dm~aiT~~AH~--~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~g 259 (407)
T COG3844 182 LLDMRAITALAHQ--HGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWG 259 (407)
T ss_pred eeeHHHHHHHHHh--cCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccC
Confidence 9999999999999 999999999999999999999999999999999999998875 8999998886665443322111
Q ss_pred cchH-HHHHHhhc----CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCc
Q 015729 232 FDWK-DYIKFYNL----GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEE 302 (401)
Q Consensus 232 ~~~~-~~~~~~~~----g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~ 302 (401)
..-. .+...|.. ..+..+++++..++++..+|+.+.+.++...+++...++.++-+.++.. ++.+..+-..
T Consensus 260 ha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~ 339 (407)
T COG3844 260 HARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAH 339 (407)
T ss_pred CCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchh
Confidence 1100 01112221 1334456999999999999999999889999999999999999999875 5666666545
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHHHHHHhcCCC
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVEMILKDVGYP 376 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~~~~~ 376 (401)
...+..+++..| ....+.+.|.++ ||..- ...++.+||++.. +++-+|+=.+++.|+++|+....+
T Consensus 340 ~~rGsqvS~~hp---~~~~V~qaLi~r-GVigD----~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a~~ 406 (407)
T COG3844 340 EERGSQVSLYHP---HGYQVMQALIDR-GVIGD----FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLAWQ 406 (407)
T ss_pred hhccceeeEecC---cHHHHHHHHHHc-Ccccc----ccCCCeeeecCccceechhHHHHHHHHHHHHHHhhccC
Confidence 566778888887 568899999877 87632 3357789999877 788999999999999999876543
No 171
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.94 E-value=1.2e-24 Score=205.56 Aligned_cols=301 Identities=15% Similarity=0.066 Sum_probs=203.2
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhcc-CCCCCeEEEEc
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNT-LSPGDRIISFL 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~ 91 (401)
+.++.+.+++.+.... ..+.......++++.+++++ |.+ .++++++|+|+++++..++..+ +++||+|+++.
T Consensus 40 ~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~ 118 (364)
T PRK07865 40 PVPPVIQEALAAAADA-PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPE 118 (364)
T ss_pred CCCHHHHHHHHHHHhh-CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECC
Confidence 3356777777653321 22333344557777777776 432 2356999999999999877776 79999999999
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcCC
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRH 168 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~ 168 (401)
|+|+.+. ..++..|++++.++ ++++++. ++++++++++++||||.+++. ++|.++|++ +
T Consensus 119 p~y~~~~--~~~~~~g~~~~~~~-------~~~~l~~-------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~--~ 180 (364)
T PRK07865 119 LAYPTYE--VGARLAGATVVRAD-------SLTELGP-------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARE--R 180 (364)
T ss_pred CCcccHH--HHHHhcCCEEEecC-------ChhhCCc-------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHH--c
Confidence 9877654 45677899888774 2233221 357899999999999999874 567788888 9
Q ss_pred CcEEEEecccccCcce---e---cc----CcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 169 PALFLVDGVSSICAID---F---RM----DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 169 ~~~li~D~a~~~~~~~---~---~~----~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
|++||+|++|...... . +. ......+++.|.+|.++ .+.++|+++.++++.+.+...+.
T Consensus 181 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~---------- 250 (364)
T PRK07865 181 GAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRK---------- 250 (364)
T ss_pred CCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHH----------
Confidence 9999999998743211 0 10 01234689999999983 23447999999988776653210
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (401)
....+.+.....++.++++. ...+++.++.+.++++.+.+.|++.|+.+..+ ..+.++|+.++ .
T Consensus 251 --------~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~~--~ 314 (364)
T PRK07865 251 --------HAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHS----EAGLYLWATRG--E 314 (364)
T ss_pred --------hcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CccEEEEEeCC--C
Confidence 00112334333333344432 12256677888889999999998888765543 24456777663 3
Q ss_pred CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 318 NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 318 ~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
+..++.+.|.++ ||.+.+|... ...+++||++.. +++++++++++|+
T Consensus 315 ~~~~~~~~l~~~-gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 DCWDTVAWLAER-GILVAPGDFYGPAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred CHHHHHHHHHHC-CEEEeCccccCcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 566788888655 9999988432 235689998876 6899999999885
No 172
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.94 E-value=1.4e-24 Score=202.07 Aligned_cols=269 Identities=15% Similarity=0.095 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCCh
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL 123 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~ 123 (401)
..++|+.+++++|.+++ .+++++|+++++..+... +.+| +|++.+|+|..+ ...++..|++++.++ |+
T Consensus 49 ~~~lr~~la~~~~~~~~-~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~--~~~~~~~g~~~~~~~-------d~ 116 (330)
T TIGR01140 49 YDELRAAAAAYYGLPAA-SVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEY--ARAWRAAGHEVVELP-------DL 116 (330)
T ss_pred HHHHHHHHHHHhCCChh-hEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHH--HHHHHHcCCEEEEeC-------CH
Confidence 38999999999998643 499999999999986544 6777 799988876654 356778899988887 78
Q ss_pred HHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcceecc----CcccceEEE
Q 015729 124 DVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAIDFRM----DEWGIDVAL 196 (401)
Q Consensus 124 ~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~----~~~~~di~~ 196 (401)
+.+++.++ +++++++++|+||||.+++ +++|.++|++ +|++||+|++|.......+. +..+.++++
T Consensus 117 ~~l~~~~~-----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 117 DRLPAALE-----ELDVLVLCNPNNPTGRLIPPETLLALAARLRA--RGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred HHHHhhcc-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHh--cCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 89988874 3578999999999999998 4556677777 99999999998644322111 123467999
Q ss_pred ecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHH
Q 015729 197 TGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENV 274 (401)
Q Consensus 197 ~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~ 274 (401)
.|.+|+++ .+.++|++++++++.+.+..... .++.+.. ++.++.+.+...+ .+..
T Consensus 190 ~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~--------------------~~~~s~~---~q~~~~~~l~~~~~~~~~ 246 (330)
T TIGR01140 190 RSLTKFFGLAGLRLGFVVAHPALLARLREALG--------------------PWTVNGP---ARAAGRAALADTAWQAAT 246 (330)
T ss_pred EecchhhcCchhhhhheeCCHHHHHHHHhcCC--------------------CCCchHH---HHHHHHHHHhchHHHHHH
Confidence 99999985 22346999999998877764311 1123333 3344444444433 4567
Q ss_pred HHHHHHHHHHHHHHHHHcC-CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeec
Q 015729 275 IERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHL 351 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~ 351 (401)
+++++++.+.+.+.|++++ +++.. ..+.++|+.++ +..++++.|.++ ||.+.+|... ...+++||++.
T Consensus 247 ~~~~~~~~~~l~~~L~~~~~~~~~~-----~~~~f~~~~~~---~~~~l~~~l~~~-gi~v~pg~~f~~~~~~~iRi~~~ 317 (330)
T TIGR01140 247 RARLAAERARLAALLARLGGLEVVG-----GTALFLLVRTP---DAAALHEALARR-GILIRDFDNFPGLDPRYLRFALP 317 (330)
T ss_pred HHHHHHHHHHHHHHHHhCCCceECC-----CCCeEEEEEcC---CHHHHHHHHHHC-CEEEEECCCCCCCCCCEEEEEec
Confidence 8888999999999999875 44332 13357777774 357899999875 9999999553 23468999776
Q ss_pred ccCCHHHHHHHHHHH
Q 015729 352 GHLNELQLLGCLAGV 366 (401)
Q Consensus 352 ~~~~~~di~~~~~~i 366 (401)
. ..++ +++++++
T Consensus 318 ~--~~~~-~~~~~~l 329 (330)
T TIGR01140 318 T--DEEN-DRLEEAL 329 (330)
T ss_pred C--HHHH-HHHHHhh
Confidence 4 3355 8887776
No 173
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.4e-24 Score=209.30 Aligned_cols=321 Identities=17% Similarity=0.103 Sum_probs=200.4
Q ss_pred ccHHHHHHHHHHHHHHHh------cC-CC--CceEEecCChhHHHHHHHhc-----cCCCCCeEEEEcCCcchHHHHHHH
Q 015729 38 PAVPALTKTLLEDIKKIF------KT-TS--GTPFLIPTTGTGAWESALTN-----TLSPGDRIISFLIGQFSLLWIDQQ 103 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~------g~-~~--~~~i~~~~g~t~a~~~~~~~-----~~~~gd~vl~~~~~~~~~~~~~~~ 103 (401)
|.......++++.+++.+ +. .+ +++|++|+|+++|+..++.+ +++|||+|++++|.|+.+. ..+
T Consensus 130 Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~--~~~ 207 (527)
T PRK09275 130 YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYL--EIP 207 (527)
T ss_pred CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHH--HHH
Confidence 333445556777776633 11 12 33699999999999988765 7899999999999877654 344
Q ss_pred HHc--CCcEEEEeCCC--CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEec
Q 015729 104 QRL--NFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 104 ~~~--g~~~~~v~~~~--~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~ 176 (401)
+.. +++++.++.++ ++.+|+++++++++ +++|++++++|+||||.+++ +++|+++|+++++|++||+|+
T Consensus 208 ~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~----~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DE 283 (527)
T PRK09275 208 ELPRYDLEVVHINADEENEWQYPDSELEKLRD----PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDD 283 (527)
T ss_pred HHcCCCeEEEEeecCcccCCCCCHHHHHhhcC----CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECC
Confidence 444 45556665543 46789999999776 47799999999999999998 566788886644799999999
Q ss_pred ccccCccee-ccC--cccceEEEecCCCccc-CCCcceEEEecHH-----HHHHhccCCCC---ccc-------------
Q 015729 177 VSSICAIDF-RMD--EWGIDVALTGSQKALS-LPTGMGIVCASPK-----ALEASKTAKSV---RVF------------- 231 (401)
Q Consensus 177 a~~~~~~~~-~~~--~~~~di~~~s~~K~l~-g~~g~G~l~~~~~-----~~~~~~~~~~~---~~~------------- 231 (401)
+|......+ ... .....+++.|.+|.++ ++-.+|+++++++ +++.+...... .-|
T Consensus 284 vY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fi 363 (527)
T PRK09275 284 VYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFI 363 (527)
T ss_pred CChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhH
Confidence 987433111 111 1135688899999984 2334699999876 33333110000 000
Q ss_pred ----cchHHHHHHhhcCCCCCCCCcHHHHH-HHHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 015729 232 ----FDWKDYIKFYNLGTFWPYTPSIQLLY-GLRAALDLIFE--EGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (401)
Q Consensus 232 ----~~~~~~~~~~~~g~~~~~~~~~~~~~-a~~~al~~~~~--~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (401)
.+......+...+ .+.+.+.+ ++-++...+.. ...+..++.++++++.+.+.| |+.+....+ .
T Consensus 364 drlvad~~~v~~~~t~~-----~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~L---g~~~~~~~p--~ 433 (527)
T PRK09275 364 DRLVADSRQVALNHTAG-----LSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGL---GLPEPEDPN--N 433 (527)
T ss_pred HHHHHHHHHHHHhhccC-----CCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHc---CCCCcCCCC--C
Confidence 0001111111112 23333322 21111222211 124456666777777666665 443321111 2
Q ss_pred CceeEEEEcCC----------------CCCHHHHHHHHHhhCCeEEccCCCCC-CCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 305 SDTVTAVIVPS----------------HINSSEIVRRAWQRYNLSLGLGLNKV-AGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 305 ~~~~~~~~~~~----------------~~~~~~l~~~L~~~~~i~v~~g~~~~-~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
...++++.++. ..+..+++.+|.++.||.+.||.... ..+++|+|+. ..+++++.++.++|+
T Consensus 434 g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a-~~~~~~~~~~~~rl~ 512 (527)
T PRK09275 434 AAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLA-NLNEEDYAKIGKAIR 512 (527)
T ss_pred eeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEe-cCCHHHHHHHHHHHH
Confidence 44566666632 12567889999988899999995532 3467999764 368999999999999
Q ss_pred HHHHhcCC
Q 015729 368 MILKDVGY 375 (401)
Q Consensus 368 ~~l~~~~~ 375 (401)
+++++...
T Consensus 513 ~~l~~y~~ 520 (527)
T PRK09275 513 KLLDEYYE 520 (527)
T ss_pred HHHHHHHH
Confidence 99886543
No 174
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.4e-24 Score=201.02 Aligned_cols=308 Identities=13% Similarity=0.065 Sum_probs=209.7
Q ss_pred cccccCC-CcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCe
Q 015729 10 NHLFVPG-PVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (401)
Q Consensus 10 ~~~~~~~-p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~ 86 (401)
.++...- |.+.++.+++++.+.... ...+. .....++|+.+++++|.+++ ++++++|+++++..++..+ +||+
T Consensus 21 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~--~gd~ 96 (337)
T PRK03967 21 IWLDKNENPFDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFYGLDAE-NIAVGNGSDELISYLVKLF--EGKH 96 (337)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHhCcCcc-eEEEcCCHHHHHHHHHHHh--CCCe
Confidence 3444443 446777788887764321 11222 23567899999999998664 5999999999998877654 7999
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
|+++.|+|..+ ...++..|++++.++.+.++.+|++.+++.. .+++++++++|+||||.+++.++|.+++ +
T Consensus 97 V~v~~P~y~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-----~~~~~v~~~~P~NPtG~~~~~~~l~~i~-~- 167 (337)
T PRK03967 97 IVITPPTFGMY--SFYAKLNGIPVIDVPLKEDFTIDGERIAEKA-----KNASAVFICSPNNPTGNLQPEEEILKVL-E- 167 (337)
T ss_pred EEEeCCChHHH--HHHHHHcCCeEEEeecCCCCCcCHHHHHHhc-----cCCCEEEEeCCCCCCCCCCCHHHHHHHH-h-
Confidence 99999977643 3456789999999999877788999998764 2568899999999999999999999998 4
Q ss_pred CCCcEEEEecccccCcc-e-ec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhh
Q 015729 167 RHPALFLVDGVSSICAI-D-FR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~-~-~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
+++++|+|++|..... . .. .......+++.|.+|.++ .+.++|++++++++.+.+.....
T Consensus 168 -~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~--------------- 231 (337)
T PRK03967 168 -TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKP--------------- 231 (337)
T ss_pred -cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcC---------------
Confidence 7899999999864321 0 00 111123688899999995 34457999999988777654321
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHH
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (401)
.++.+.....++..+++.. +.+.+.+++..+.++.+.+.|.+.. . + ..+.++++.++ +
T Consensus 232 -----~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~---~-~----~~~~~~~~~~~-------~ 289 (337)
T PRK03967 232 -----PFSLNILTMKIVRLALDHY--DLIEERIDYIIKERERVRRELGEYA---Y-P----SDANFLLLKLD-------A 289 (337)
T ss_pred -----CCCCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHhccCc---C-C----CCCcEEEEhHH-------H
Confidence 1123444444444444321 1233444555566666666665531 1 1 13346666552 5
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.|.++ ||.++++.. ...+++||++. +.++.++++++|+.+...-
T Consensus 290 ~~~l~~~-gi~v~~~~~-~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 290 YDYLLEN-GIVVRKLSG-RLEGHIRVTVG---KREENDEFIKALKEIKEGY 335 (337)
T ss_pred HHHHHHC-CEEEEeCCC-CCCCeEEEecC---CHHHHHHHHHHHHHHHHhc
Confidence 6777765 999986532 23568999754 5777888888888776543
No 175
>PRK10534 L-threonine aldolase; Provisional
Probab=99.94 E-value=3e-24 Score=200.55 Aligned_cols=312 Identities=14% Similarity=0.067 Sum_probs=205.7
Q ss_pred CCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
+|. ++|.+++++.........+.......++++.+++++|.++ +++++||++++..++.+.+.+||+|+++.+.|.
T Consensus 9 ~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~---~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~ 84 (333)
T PRK10534 9 VTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEA---ALFLPTGTQANLVALLSHCERGEEYIVGQAAHN 84 (333)
T ss_pred CCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCe---EEEeCchHHHHHHHHHHhcCCCCeeEEechhhh
Confidence 455 6788999987744444334456778899999999999866 567888898888888788899999998877654
Q ss_pred hHHHHHHHHHc-CCcEEEEeCCCCCCCChHHHHHHHhccCC--CCceEEEEEecCCCcccccchHHH---HHHhhhcCCC
Q 015729 96 SLLWIDQQQRL-NFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNNLSKV---RKLLDEYRHP 169 (401)
Q Consensus 96 ~~~~~~~~~~~-g~~~~~v~~~~~~~~d~~~le~~~~~~~~--~~~~~i~~~~~~n~tG~~~~l~~i---~~l~~~~~~~ 169 (401)
..+....+... +++++.++.+.++.+|+++++++++++.. .+++++++++|+ +|.+.|.++| .++|++ ++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~--~~ 160 (333)
T PRK10534 85 YLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRE--RN 160 (333)
T ss_pred hHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHH--cC
Confidence 32211112233 36778888777788999999998864210 046899998655 5999987655 567777 89
Q ss_pred cEEEEecccccCccee-ccC----cccceEEEecCCCcccCCCcce-EEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 170 ALFLVDGVSSICAIDF-RMD----EWGIDVALTGSQKALSLPTGMG-IVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 170 ~~li~D~a~~~~~~~~-~~~----~~~~di~~~s~~K~l~g~~g~G-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
++|++|++|.++.... +.. ....|.++.|.+|.++.+ +| +++.++++++.+..... . .
T Consensus 161 ~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~------------~--~ 224 (333)
T PRK10534 161 LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRK------------M--T 224 (333)
T ss_pred CeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHH------------H--h
Confidence 9999999977532110 100 112355556889987533 56 68788988776653210 0 0
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
+. ..+... .++.+++..+.. .....++..++++++.+.|+++|+++..+ .. .++++++++ .+..++.
T Consensus 225 ~~----~~~~~~-~~~a~~~~~l~~--~~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~~-nfv~~~~~~-~~~~~~~ 291 (333)
T PRK10534 225 GG----GMRQAG-ILAAAGLYALKH--NVARLQEDHDNAAWLAEQLREAGADVMRQ----DT-NMLFVRVGE-EQAAALG 291 (333)
T ss_pred CC----chhhHH-HHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhCCCccCCC----Cc-eEEEEECCc-hhHHHHH
Confidence 10 111111 112222222221 12344445567789999999988876643 23 466777753 3467888
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.|.++ ||.++++ .++|++.+..+|++++++++++|++.+.
T Consensus 292 ~~l~~~-gi~v~~~------~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 292 EYMRER-NVLINAS------PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred HHHHHc-CeeecCC------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 878766 9999765 2578887666799999999999987653
No 176
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.94 E-value=3e-24 Score=206.72 Aligned_cols=301 Identities=16% Similarity=0.103 Sum_probs=189.1
Q ss_pred eEEecCChhHHHHHHHhc-----cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-------CCCChHHHHHH
Q 015729 62 PFLIPTTGTGAWESALTN-----TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-------EGAKLDVLASK 129 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~-----~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-------~~~d~~~le~~ 129 (401)
++++|+|+++|+..++.+ ++.|||+|++++|.|+.+.........|++++.++.+.. +.+|+++++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 699999999999988766 789999999999987765421112334778888887542 67899999987
Q ss_pred HhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCccee-ccC--cccceEEEecCCCcc
Q 015729 130 LAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAIDF-RMD--EWGIDVALTGSQKAL 203 (401)
Q Consensus 130 ~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-~~~--~~~~di~~~s~~K~l 203 (401)
++ +++|++++++|+||||.+++ +++|.++|++|+++++||+|++|+.....+ ... .....+++.|.+|++
T Consensus 237 ~~----~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 237 RD----PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYF 312 (521)
T ss_pred cC----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhc
Confidence 65 46799999999999999997 566788888854599999999987432111 111 112468899999998
Q ss_pred c-CCCcceEEEecHH-----HHHHhccCCCC---ccccc---------hHHHH----HHhhcCCCCCCCCcHHHH-HHHH
Q 015729 204 S-LPTGMGIVCASPK-----ALEASKTAKSV---RVFFD---------WKDYI----KFYNLGTFWPYTPSIQLL-YGLR 260 (401)
Q Consensus 204 ~-g~~g~G~l~~~~~-----~~~~~~~~~~~---~~~~~---------~~~~~----~~~~~g~~~~~~~~~~~~-~a~~ 260 (401)
+ ++-.+|+++.+++ ++..++..... .-|.. +.+.. ......+ ..+.+.+.+. .++-
T Consensus 313 g~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~-~~g~s~p~Q~q~al~ 391 (521)
T TIGR03801 313 GATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNH-TAGLSTPQQVQMALF 391 (521)
T ss_pred cCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhc-cCCCCcHHHHHHHHH
Confidence 4 2344799998865 22222100000 00000 00000 0111111 1111222221 1211
Q ss_pred HHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC-C---------------CCHHHH
Q 015729 261 AALDLIFE--EGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-H---------------INSSEI 322 (401)
Q Consensus 261 ~al~~~~~--~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~l 322 (401)
++...+.. .-.+..++.++++.+.+.+.| |+.+....+ ....++++.++. + .+..++
T Consensus 392 a~~all~~~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~--~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~ 466 (521)
T TIGR03801 392 SLFALMDKENAYKAETKDICRRREKLLFRGL---GLPLQEDPN--DVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDV 466 (521)
T ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCC--CeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHH
Confidence 22222221 114455666777766666666 554322111 344677777752 1 146689
Q ss_pred HHHHHhhCCeEEccCCCCC-CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 323 VRRAWQRYNLSLGLGLNKV-AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~-~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+|.++.||.+.||.... ..+++||++. ..+++++.++.++|++.+++.
T Consensus 467 ~~~L~~e~gV~v~PG~~Fg~~~~~vRisla-~l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 467 LFRLAEETGIVLLPGGGFGGPEWSVRVSLA-NLNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred HHHHHHhCCEEEeCchhcCCCCCeEEEEec-CCCHHHHHHHHHHHHHHHHHH
Confidence 9999988899999995432 2457999774 378999999999999998764
No 177
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=1.6e-24 Score=204.05 Aligned_cols=309 Identities=13% Similarity=0.026 Sum_probs=204.2
Q ss_pred cccccCC-C-cCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHhcc-
Q 015729 10 NHLFVPG-P-VHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNT- 80 (401)
Q Consensus 10 ~~~~~~~-p-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~--~~~~i~~~~g~t~a~~~~~~~~- 80 (401)
.+.++.| | .+.++.+.+++.+... ...+.......++++.+++++ |.+ +++++++|+|+++++..++..+
T Consensus 23 ~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~ 101 (357)
T TIGR03539 23 IVDLSVGTPVDPVPPLIRAALAAAAD-APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLG 101 (357)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHh-hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHc
Confidence 3444433 3 3445667777765322 222322333456666666665 432 3356999999999999887776
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hH
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LS 157 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~ 157 (401)
+++||+|++++|+|+++. ..++..|++++.++ +++.++ . ++++++++++++||||.+++ ++
T Consensus 102 ~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~v~-------~~~~l~----~---~~~~~v~~~~p~NPtG~~~~~~~~~ 165 (357)
T TIGR03539 102 LGPGDTVVIPELAYPTYE--VGALLAGATPVAAD-------DPTELD----P---VGPDLIWLNSPGNPTGRVLSVDELR 165 (357)
T ss_pred CCCCCEEEECCCCcHHHH--HHHHhcCCEEeccC-------ChhhcC----c---cCccEEEEeCCCCCcCccCCHHHHH
Confidence 799999999999887664 34567898887763 233222 1 35799999999999999997 55
Q ss_pred HHHHHhhhcCCCcEEEEecccccCcc---e---eccC----cccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCC
Q 015729 158 KVRKLLDEYRHPALFLVDGVSSICAI---D---FRMD----EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAK 226 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~~~~~---~---~~~~----~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~ 226 (401)
+|.++|++ +|++||+|++|..... + ++.. .....+++.|.+|.++ .+..+|+++++++..+++....
T Consensus 166 ~i~~~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~ 243 (357)
T TIGR03539 166 AIVAWARE--RGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVR 243 (357)
T ss_pred HHHHHHHH--cCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHHHHHHHH
Confidence 68888888 9999999999863211 1 1110 1123588899999873 2234699999888877664321
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
. . . ...++.....++.++++. ...+++.++.+.++++.+.+.|.+.|+.+..+ ..+
T Consensus 244 ~-------------~--~---~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p----~~~ 299 (357)
T TIGR03539 244 K-------------H--A---GLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS----EAG 299 (357)
T ss_pred h-------------h--c---ccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC----Ccc
Confidence 0 0 0 112444333444444432 12356677888888899999998888766544 245
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~--~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
.++++.++. +..++.+.|.++ ||.+.+|... ...+++||++.. +++++++++++|
T Consensus 300 ~~~~~~~~~--~~~~~~~~l~~~-gV~v~pg~~f~~~~~~~iRis~~~--~~~~i~~~~~~l 356 (357)
T TIGR03539 300 LYLWATRGE--DAWDTVDRLAEL-GILVAPGDFYGPAGSQHVRVALTA--TDERIAAAVARL 356 (357)
T ss_pred EEEEEECCC--CHHHHHHHHHhC-CEEECCccccCCCCCCeEEEEecC--CHHHHHHHHHhh
Confidence 677777643 567888888655 9999998532 224689998865 688999998876
No 178
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.94 E-value=3.2e-24 Score=203.70 Aligned_cols=313 Identities=16% Similarity=0.130 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-C
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-G 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~ 118 (401)
.....++++.+++++|.+. .++++|||+|+..++.++ +++||+|+++.++|++.. ..++..|++++.+++++ +
T Consensus 28 g~~~~~le~~la~~~g~~~---~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~--~~~~~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKY---AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATA--NCALYCGAKVDFVDIDPDT 102 (380)
T ss_pred ChhHHHHHHHHHHHHCCCe---EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--HHHHHcCCEEEEEecCCCc
Confidence 3457899999999999864 456678999999999887 899999999999876653 55678899999999965 4
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccc----eE
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGI----DV 194 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~----di 194 (401)
+.+|++++++.+++...++++++++++ ++|...++++|.++|++ +|++||+|++|+.|.. ++....+. |+
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~--~~~~lI~D~a~a~g~~-~~~~~~g~~~~~d~ 176 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALAKK--HGLKIIEDASHALGAE-YGGKPVGNCRYADA 176 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHHHH--cCCEEEEECCCcccCc-cCCEeCCCccccce
Confidence 578999999999732112568887654 58999999999999999 9999999999998865 44444455 99
Q ss_pred EEecCC--CcccCCCcceEEE-ecHHHHHHhccCCCCccccchH------HHHHHhhcCCCCCCCCcHHHHHHHHHHHHH
Q 015729 195 ALTGSQ--KALSLPTGMGIVC-ASPKALEASKTAKSVRVFFDWK------DYIKFYNLGTFWPYTPSIQLLYGLRAALDL 265 (401)
Q Consensus 195 ~~~s~~--K~l~g~~g~G~l~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~~~a~~~al~~ 265 (401)
.++|.| |++.++.| |+++ .++++.+++......+...+.. .....++.+. ...+... ..+.+++..
T Consensus 177 ~~~S~~~~K~~~~~~G-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~n~~m---~~l~aa~g~ 251 (380)
T TIGR03588 177 TVFSFHPVKIITTAEG-GAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQE-LGFNYRM---TDIQAALGL 251 (380)
T ss_pred EEEecCCCCcccccCc-eEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeec-cccccCc---cHHHHHHHH
Confidence 998876 98976665 5454 4566666554322111110000 0000111110 0001111 122333332
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCC-CccCCceeEEEEcC--CCCCHHHHHHHHHhhCCeEEccCCCCC
Q 015729 266 IFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK-EEWFSDTVTAVIVP--SHINSSEIVRRAWQRYNLSLGLGLNKV 341 (401)
Q Consensus 266 ~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~~~i~v~~g~~~~ 341 (401)
.+-..+++..++.+++.+++.+.|.++ ++.+.... .....+....+.++ .+.+.+++.+.|.++ ||.++..+.+.
T Consensus 252 ~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~-gI~~~~~~~~~ 330 (380)
T TIGR03588 252 SQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAA-GIGVQVHYIPV 330 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHC-CCCcccCCccc
Confidence 222236788889999999999999887 45543321 11122334444453 345788999999765 98876543221
Q ss_pred ----------C-----------CcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 342 ----------A-----------GKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 342 ----------~-----------~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
. .+.+++.++..+|++|+++++++|++++
T Consensus 331 ~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 331 HLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred ccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 0 1458998888899999999999998764
No 179
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.4e-24 Score=204.99 Aligned_cols=298 Identities=13% Similarity=0.085 Sum_probs=202.2
Q ss_pred CccHHHHHHHHHHHHHHHhcCC-----CCceEE--ecCChhHHHHHHHh---ccCCCCCeEEEEcCCcchHHHHHHHHHc
Q 015729 37 SPAVPALTKTLLEDIKKIFKTT-----SGTPFL--IPTTGTGAWESALT---NTLSPGDRIISFLIGQFSLLWIDQQQRL 106 (401)
Q Consensus 37 ~~~~~~~~~~l~~~la~~~g~~-----~~~~i~--~~~g~t~a~~~~~~---~~~~~gd~vl~~~~~~~~~~~~~~~~~~ 106 (401)
.|.......++|+.+++++... .+++++ .|.|+++|+..++. +++++||+|++++|+|+.+. ..++..
T Consensus 67 ~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~--~~~~~~ 144 (404)
T PTZ00376 67 EYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHV--NIFKSA 144 (404)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHc
Confidence 3445566779999999987422 334576 48899999987764 67899999999999877654 578889
Q ss_pred CCcEEEEeCC--CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcCCCcEEEEecccccC
Q 015729 107 NFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 107 g~~~~~v~~~--~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
|++++.+++. .++.+|++.+++.+.+.+ ++.+++++++||||||.+++. ++|.++|++ ++++||+|+++...
T Consensus 145 G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~-~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~--~~~~ii~De~Y~~~ 221 (404)
T PTZ00376 145 GLNVKEYRYYDPKTKGLDFDGMLEDLRTAP-NGSVVLLHACAHNPTGVDPTEEQWKEIADVMKR--KNLIPFFDMAYQGF 221 (404)
T ss_pred CCceeeccccCcccCCcCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh--CCcEEEEehhhcCc
Confidence 9999999983 246789999999986432 245778889999999999974 557778888 99999999998643
Q ss_pred cce---------eccCcc-cceEEEecCCCccc-CCCcceEE---EecHHHHHHhccCCCCccccchHHHHHHhhcCCCC
Q 015729 182 AID---------FRMDEW-GIDVALTGSQKALS-LPTGMGIV---CASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (401)
Q Consensus 182 ~~~---------~~~~~~-~~di~~~s~~K~l~-g~~g~G~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 247 (401)
... ...... ...+++.|.+|.++ .+.++|++ +.+++..+.+.... .... ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~------------~~~~-~~~- 287 (404)
T PTZ00376 222 ASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQL------------KLII-RPM- 287 (404)
T ss_pred cCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHH------------HHHH-hhh-
Confidence 221 011111 23588899999996 34557998 45666544332100 0000 000
Q ss_pred CCCCcHHHHHHHHHHHHHH--HH---hcHHHHHHHHHHHHHHHHHHHHHcCCc----cccCCCccCCceeEEEEcCCCCC
Q 015729 248 PYTPSIQLLYGLRAALDLI--FE---EGLENVIERHRRLGKATRLAVEAWGLK----NCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 248 ~~~~~~~~~~a~~~al~~~--~~---~g~~~~~~~~~~~~~~l~~~L~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
..+++.....++..+++.- .+ ..+++.+++++++++.+.+.|++.+.. +..+ ..+.++|+.++
T Consensus 288 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p----~gg~f~~~~~~---- 359 (404)
T PTZ00376 288 YSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN----QIGMFSFTGLT---- 359 (404)
T ss_pred cCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc----CceEEEecCCC----
Confidence 1123333333344444211 01 113455677888999999999887533 2222 34567766652
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.+++++|.+++||.+.++ + ||++.+ .+++++++++++|++++.
T Consensus 360 -~~~~~~L~~~~~v~v~p~------~--Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 360 -KEQVERLIEKYHIYLLDN------G--RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred -HHHHHHHHHhCCEeecCC------C--eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 478888888889998766 2 998754 799999999999998874
No 180
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=5.8e-24 Score=198.06 Aligned_cols=297 Identities=14% Similarity=0.085 Sum_probs=208.3
Q ss_pred CCcCChHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 16 GPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
.|.++++.+++++.+.... ...+. .....++++.++++++.. +++++++++|+++++..++.++ |+|++.+
T Consensus 29 ~~~~~p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~ 103 (335)
T PRK14808 29 NPFPFPEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----DRSVFFP 103 (335)
T ss_pred CCCCCCHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----CcEEECC
Confidence 4777888888888764321 11111 124678999999999832 3445999999999999988776 6799998
Q ss_pred CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcE
Q 015729 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPAL 171 (401)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~ 171 (401)
|+|+.+. ..++..|++++.++.+.++.++... +. +++++++++|+||||.+++.+++.+++ + ++++
T Consensus 104 P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~----~~-----~~~~i~i~nP~NPTG~~~s~~~l~~l~-~--~~~~ 169 (335)
T PRK14808 104 PTYSCYR--IFAKAVGAKFLEVPLTKDLRIPEVN----VG-----EGDVVFIPNPNNPTGHVFEREEIERIL-K--TGAF 169 (335)
T ss_pred CCHHHHH--HHHHHcCCeEEEecCCCcCCCChhH----cc-----CCCEEEEeCCCCCCCCCcCHHHHHHHH-h--cCCE
Confidence 8766553 6788899999999988766544221 21 358999999999999999999999998 4 7899
Q ss_pred EEEecccccCcc-e-ec-cCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCC
Q 015729 172 FLVDGVSSICAI-D-FR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (401)
Q Consensus 172 li~D~a~~~~~~-~-~~-~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 247 (401)
||+|+++..... . .. .......+++.|.+|.++ .+.++|++++++++.+.+...+.
T Consensus 170 ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~-------------------- 229 (335)
T PRK14808 170 VALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRL-------------------- 229 (335)
T ss_pred EEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcC--------------------
Confidence 999999864321 0 11 112234688899999996 34457999999998887754321
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHH
Q 015729 248 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (401)
Q Consensus 248 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (401)
.++.+.....++.++++.. ..+++..+++.+.++.+.+.|++.|+++..+ .+.++++.+|. .+..++.+.|.
T Consensus 230 ~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-----~g~f~~~~l~~-~~~~~~~~~l~ 301 (335)
T PRK14808 230 PFNVSYVSQMFAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITDS-----RGNFVFIFMEK-EEKERLLEHLR 301 (335)
T ss_pred CCCCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-----CCeEEEEeCCC-ccHHHHHHHHH
Confidence 1123333334445555421 1245556677777888889998888765543 23477888863 35678888887
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 328 ~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
++ ||.|+.. ..++||++. +.++.++++++|++
T Consensus 302 ~~-Gi~V~~~-----~~~~Risi~---~~~~~~~~~~~l~~ 333 (335)
T PRK14808 302 AK-NIAVRSF-----REGVRITIG---KREENDMILKELEV 333 (335)
T ss_pred HC-CeEEEEC-----CCCeEEecC---CHHHHHHHHHHHHh
Confidence 66 9999842 357999754 57888999988864
No 181
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.94 E-value=1.6e-23 Score=194.95 Aligned_cols=270 Identities=14% Similarity=0.070 Sum_probs=192.0
Q ss_pred HHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChH
Q 015729 45 KTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLD 124 (401)
Q Consensus 45 ~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 124 (401)
.+|++.|+++++.+ ++++++|+++|+..++ .+.+||+|++++|+|+.+. ..++..|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~~---~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~--~~~~~~g~~~~~v~~~-------- 116 (330)
T PRK05664 52 DGLEAAARAYYGAP---QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA--HAWRRAGHQVRELDEA-------- 116 (330)
T ss_pred HHHHHHHHHHhCCC---CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH--HHHHHcCCeEEEechh--------
Confidence 68999999999864 3999999999998875 3579999999999876553 6678899999988753
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCcccccchHH---HHHHhhhcCCCcEEEEecccccCcc--e-eccCcccceEEEec
Q 015729 125 VLASKLAADTAHTIKAICIVHNETATGVTNNLSK---VRKLLDEYRHPALFLVDGVSSICAI--D-FRMDEWGIDVALTG 198 (401)
Q Consensus 125 ~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~---i~~l~~~~~~~~~li~D~a~~~~~~--~-~~~~~~~~di~~~s 198 (401)
++++.++ +++++++++|+||||.+++.++ |.++|++ ++++||+|+++..... + .........+++.|
T Consensus 117 ~~~~~~~-----~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~--~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~S 189 (330)
T PRK05664 117 EVEAALD-----SLDVLVVVNPNNPTGRRFDPARLLAWHARLAA--RGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRS 189 (330)
T ss_pred hHhhhhc-----CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHh--cCCEEEEECCcccCCCcccccccccCCCEEEEee
Confidence 4555553 3578999999999999998655 5555677 8999999999864321 1 12222223588999
Q ss_pred CCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHH
Q 015729 199 SQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (401)
Q Consensus 199 ~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 277 (401)
.+|.++ .+.++|++++++++.+.+..... .++.+.....++.++++.. ...++.+++
T Consensus 190 fSK~~gl~GlRiG~~v~~~~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~L~~~--~~~~~~~~~ 247 (330)
T PRK05664 190 FGKFFGLAGARLGFVLAEPALLRALAELLG--------------------PWTVSGPTRWLAQAALADT--PWQRRQRER 247 (330)
T ss_pred ccccccCCCcceEEEEeCHHHHHHHHHhcC--------------------CCCCCHHHHHHHHHHHhCh--HHHHHHHHH
Confidence 999995 44557999999998877654211 1123333334444444321 114567788
Q ss_pred HHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHH
Q 015729 278 HRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEL 357 (401)
Q Consensus 278 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~ 357 (401)
+.++++.+.+.|++.|++... ....++++..+ +..++.+.|.++ ||.|+.. . ..+++||++.. +++
T Consensus 248 ~~~~r~~l~~~L~~~~~~~~~-----~~~~f~~~~~~---~~~~~~~~l~~~-gi~v~~f-~--~~~~iRis~~~--~~~ 313 (330)
T PRK05664 248 LLAASQRLAALLRRHGLTPAG-----GCALFQWVRTE---DAAALHEFLARR-GILTRLF-E--QPASLRFGLPA--DEA 313 (330)
T ss_pred HHHHHHHHHHHHHHCCCcccC-----CcceEEEEecC---CHHHHHHHHHHC-CeEEEEC-C--CCCeEEEECCC--CHH
Confidence 888899999999987754221 12245666653 577888888766 9999743 2 35689998765 678
Q ss_pred HHHHHHHHHHHHHHh
Q 015729 358 QLLGCLAGVEMILKD 372 (401)
Q Consensus 358 di~~~~~~i~~~l~~ 372 (401)
+.++++++|+...++
T Consensus 314 ~~~~l~~al~~~~~~ 328 (330)
T PRK05664 314 DWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHHHHhh
Confidence 899999999887665
No 182
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=9.5e-24 Score=196.82 Aligned_cols=274 Identities=14% Similarity=0.064 Sum_probs=194.0
Q ss_pred HHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChH
Q 015729 45 KTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLD 124 (401)
Q Consensus 45 ~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 124 (401)
.+|++.+++++|.+.++++++++|+++++..+. .++++|+ |++..|+|+.+. ..++..|++++.++.+. +
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~-~~~~~g~-v~v~~P~y~~y~--~~~~~~g~~~~~v~~~~------~ 125 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP-ALLPRGR-VGIAPLAYSEYA--PAFARHGHRVVPLDEAA------D 125 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH-HhcCCCe-EEEcCCCcHHHH--HHHHHCCCEEEeecccc------h
Confidence 699999999999976556999999999998664 4577876 888888766543 56778899998887543 2
Q ss_pred HHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhh-cCCCcEEEEecccccCccee---ccCcccceEEEecCC
Q 015729 125 VLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVSSICAIDF---RMDEWGIDVALTGSQ 200 (401)
Q Consensus 125 ~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~-~~~~~~li~D~a~~~~~~~~---~~~~~~~di~~~s~~ 200 (401)
. +. ..++.+++++|+||||.+++.+++.++++. ..+++++|+|+++....... ...+....+++.|.+
T Consensus 126 ~----~~----~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfS 197 (339)
T PRK06959 126 T----LP----AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVG 197 (339)
T ss_pred h----cc----ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecCh
Confidence 2 22 234789999999999999998777666542 11789999999987543211 111122358889999
Q ss_pred Cccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q 015729 201 KALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHR 279 (401)
Q Consensus 201 K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 279 (401)
|.++ .+..+|++++++++++.+..... +++.+.....++.++++. ....++.++++.
T Consensus 198 K~~gl~GlRiGy~v~~~~li~~l~~~~~--------------------~~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~ 255 (339)
T PRK06959 198 KFFGLAGVRAGFVLAAPALLAALRDALG--------------------AWTVSGPARHAVRAAFAD--AAWQAAMRERLA 255 (339)
T ss_pred hhcCCcchheEEEecCHHHHHHHHHhcC--------------------CCCCcHHHHHHHHHHhCc--HHHHHHHHHHHH
Confidence 9985 34457999999998887764321 112334333444444431 112456778888
Q ss_pred HHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHH
Q 015729 280 RLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 359 (401)
Q Consensus 280 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di 359 (401)
+.++++.+.|+++|+++.. .+.++++.++ +..++.+.|.++ ||.|+.. ...+++||++.+ +.+|.
T Consensus 256 ~~r~~l~~~L~~~g~~~~~------~~~f~~~~~~---~~~~l~~~l~~~-GI~vr~~---~~~~~lRisi~~--~~~e~ 320 (339)
T PRK06959 256 ADGARLAALLRAHGFAVHA------TPLFSWTDDP---RAAALHAALARR-GIWTRYF---APPPSVRFGLPA--DEAEW 320 (339)
T ss_pred HHHHHHHHHHHHCCCCccC------cceEEEEeCC---CHHHHHHHHHhC-CeEEEEC---CCCCeEEEECCC--CHHHH
Confidence 8999999999998876542 2356677764 567888989876 9999743 124589998655 77899
Q ss_pred HHHHHHHHHHHHhc
Q 015729 360 LGCLAGVEMILKDV 373 (401)
Q Consensus 360 ~~~~~~i~~~l~~~ 373 (401)
++++++|+++++.+
T Consensus 321 ~~l~~al~~~~~~~ 334 (339)
T PRK06959 321 QRLEDALAECVPTL 334 (339)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887754
No 183
>PLN02880 tyrosine decarboxylase
Probab=99.94 E-value=4.3e-24 Score=206.53 Aligned_cols=352 Identities=14% Similarity=0.092 Sum_probs=234.3
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCC------ceEEecCChhHHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG------TPFLIPTTGTGAWESAL 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~------~~i~~~~g~t~a~~~~~ 77 (401)
+.+.+.+++...+..+-+.+....+. ..++....+..++.+.+++++|.+.. ...++++|||+|+..++
T Consensus 84 ~f~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al 163 (490)
T PLN02880 84 NYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVL 163 (490)
T ss_pred CeeEeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHH
Confidence 45666666665555555555553322 23455667788999999999998753 23688999999987765
Q ss_pred hc----cCC-------CCCeEEEEcCCcchHHHHHHHHHcCC---cEEEEeCCC--CCCCChHHHHHHHhccC--CCCce
Q 015729 78 TN----TLS-------PGDRIISFLIGQFSLLWIDQQQRLNF---NVDVVESDW--GEGAKLDVLASKLAADT--AHTIK 139 (401)
Q Consensus 78 ~~----~~~-------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~le~~~~~~~--~~~~~ 139 (401)
.+ .++ +.-.|++++..|+|. .+.++..|+ +++.|+++. ++++|+++|++++.++. +..|.
T Consensus 164 ~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv--~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~ 241 (490)
T PLN02880 164 LAARDRVLRKVGKNALEKLVVYASDQTHSAL--QKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPF 241 (490)
T ss_pred HHHHHHHHHHhcccccCCeEEEEcCCchHHH--HHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccE
Confidence 32 111 112455566667765 477888888 478899875 45899999999997632 23577
Q ss_pred EEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee-----ccCc-ccceEEEecCCCcccCCCcceEEE
Q 015729 140 AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-----RMDE-WGIDVALTGSQKALSLPTGMGIVC 213 (401)
Q Consensus 140 ~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-----~~~~-~~~di~~~s~~K~l~g~~g~G~l~ 213 (401)
+|+.+.+++.+|.+.|+++|.++|++ +|+|+|+|+||+.+.+.. .... .++|.++.++|||++.|.+||+++
T Consensus 242 ~vvataGTT~~GaiDpl~eI~~i~~~--~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~ll 319 (490)
T PLN02880 242 FLCATVGTTSSTAVDPLLELGKIAKS--NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLW 319 (490)
T ss_pred EEEEecCCCcCcccCcHHHHHHHHHH--cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEE
Confidence 88888999999999999999999999 999999999998775432 1232 368999999999999999999999
Q ss_pred ecHHHH--HHhccCCCCccccchHH-H-HHHhhcCCC-CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 015729 214 ASPKAL--EASKTAKSVRVFFDWKD-Y-IKFYNLGTF-WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLA 288 (401)
Q Consensus 214 ~~~~~~--~~~~~~~~~~~~~~~~~-~-~~~~~~g~~-~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~ 288 (401)
+++... ..+.. ...|..... . ...+....+ ...+.. .....++.+++.+-.+|+.+..++..++++++.+.
T Consensus 320 vr~~~~l~~~~~~---~~~Yl~~~~~~~~~~~~~~~~~i~~~rr-~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~ 395 (490)
T PLN02880 320 VKDRNALIQSLST---NPEFLKNKASQANSVVDYKDWQIPLGRR-FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQL 395 (490)
T ss_pred EeCHHHHHHHHcc---CHHHhcCccccccCCCChhccCcCCCCc-ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 885331 21211 111100000 0 000000000 001111 12346666777776777888888888999999999
Q ss_pred HHHc-CCccccCCCccCCceeEEEEcC-CCCCH-------HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCC-HHH
Q 015729 289 VEAW-GLKNCTQKEEWFSDTVTAVIVP-SHINS-------SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLN-ELQ 358 (401)
Q Consensus 289 L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~-~~d 358 (401)
|++. ++++..+. .. .+++|+++ ...+. .++.++|.+...+.+...... ...++|+++....| ++|
T Consensus 396 l~~~~~~el~~~~---~~-~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~-g~~~lR~~~~n~~tt~~d 470 (490)
T PLN02880 396 VAQDSRFEVVTPR---IF-SLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLS-GKYVLRFAVGAPLTEERH 470 (490)
T ss_pred HhcCCCEEEecCC---ce-EEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEEC-CEEEEEEEecCCCCCHHH
Confidence 9886 88887642 12 36677774 22221 245566665566776655332 23469999877555 699
Q ss_pred HHHHHHHHHHHHHhc
Q 015729 359 LLGCLAGVEMILKDV 373 (401)
Q Consensus 359 i~~~~~~i~~~l~~~ 373 (401)
++.+++.|.+..+++
T Consensus 471 i~~~~~~i~~~~~~~ 485 (490)
T PLN02880 471 VTAAWKVLQDEASKL 485 (490)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887664
No 184
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.93 E-value=1e-23 Score=201.36 Aligned_cols=312 Identities=14% Similarity=0.064 Sum_probs=205.2
Q ss_pred HHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCC-----CCceE--EecCChhHHHHHHHhcc--CCCCCeEEEE
Q 015729 22 DQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGTPF--LIPTTGTGAWESALTNT--LSPGDRIISF 90 (401)
Q Consensus 22 ~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~-----~~~~i--~~~~g~t~a~~~~~~~~--~~~gd~vl~~ 90 (401)
+.+.+++.+.... ...|.......++|+.+++++... .++++ ++|+|+++|+..++..+ +++||+|+++
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~ 126 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVS 126 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEEC
Confidence 6777777664321 223444566778999998887432 23445 89999999999987554 5899999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeC-C-CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVES-D-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~ 165 (401)
+|+|+.+. ..++..|++++.++. + .++.+|++++++.+++.. .+.++++++++|||||.+++ +++|.++|++
T Consensus 127 ~P~y~~~~--~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~ 203 (396)
T PRK09257 127 DPTWPNHR--AIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAP-AGDVVLLHGCCHNPTGADLTPEQWDELAELLKE 203 (396)
T ss_pred CCCcccHH--HHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 99877664 567889999999997 3 346789999999887422 23456677899999999997 4567888888
Q ss_pred cCCCcEEEEecccccCccee--------ccCc-ccceEEEecCCCcccC-CCcceEEEe---cHHHHHHhccCCCCcccc
Q 015729 166 YRHPALFLVDGVSSICAIDF--------RMDE-WGIDVALTGSQKALSL-PTGMGIVCA---SPKALEASKTAKSVRVFF 232 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~--------~~~~-~~~di~~~s~~K~l~g-~~g~G~l~~---~~~~~~~~~~~~~~~~~~ 232 (401)
+|++||+|+++....... .+.. ....+++.|.+|.++. +.++|++++ +++...++...
T Consensus 204 --~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~------- 274 (396)
T PRK09257 204 --RGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQ------- 274 (396)
T ss_pred --CCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHH-------
Confidence 999999999986432110 0111 1246888999999963 445799873 34433222110
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH--H---HhcHHHHHHHHHHHHHHHHHHHHHcC----CccccCCCcc
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI--F---EEGLENVIERHRRLGKATRLAVEAWG----LKNCTQKEEW 303 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~--~---~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~ 303 (401)
+. ...... .++++.....++...+..- . ...+++.+++++++++.+.+.|++.+ +.+..+
T Consensus 275 -~~---~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p---- 343 (396)
T PRK09257 275 -LK---ATIRTN---YSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIAR---- 343 (396)
T ss_pred -HH---HHhhhh---cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc----
Confidence 00 000001 1123333323333333211 0 12355678888999999999998864 333332
Q ss_pred CCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 304 FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
..+.++|+.++ . +++..|.++.||.+.+. + ||++.+ .+++++++++++|++++
T Consensus 344 ~gg~~~w~~l~----~-~~~~~l~~~~~V~~~p~------~--ri~~~~-~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 344 QRGMFSYSGLT----P-EQVDRLREEFGVYAVGS------G--RINVAG-LNESNIDYVAEAIAAVL 396 (396)
T ss_pred cceEEEecCCC----H-HHHHHHHHcCCEEEcCC------C--eEEEee-CCHHHHHHHHHHHHhhC
Confidence 34567777663 2 44555666669988642 2 997754 89999999999998753
No 185
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.93 E-value=6.4e-24 Score=204.23 Aligned_cols=293 Identities=12% Similarity=0.032 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccCC-----CCCeEEE-EcCCcchHHHHHHHHHcC---
Q 015729 42 ALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLS-----PGDRIIS-FLIGQFSLLWIDQQQRLN--- 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~~-----~gd~vl~-~~~~~~~~~~~~~~~~~g--- 107 (401)
....++|+.|++++ |.+ ++++|++|+|+++|+..++..+++ +||.|++ .+|+|+.+.. .+...+
T Consensus 74 ~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~--~~~~~~~~~ 151 (416)
T PRK09440 74 QGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYAD--AGLEEDLFV 151 (416)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHH--HhhccCcee
Confidence 34557777777776 432 345699999999999999888774 6899999 6888776542 222122
Q ss_pred -CcEEEEeCCC---CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEeccccc
Q 015729 108 -FNVDVVESDW---GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSI 180 (401)
Q Consensus 108 -~~~~~v~~~~---~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~ 180 (401)
.....++.+. ++.+|+++++ +. .+++++++++|+||||.+++ +++|.++|++ +|++||+|++|..
T Consensus 152 ~~~~~~~~~~~~~~~~~~d~~~l~--~~----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~--~~~~iI~De~Y~~ 223 (416)
T PRK09440 152 SYRPNIELLPEGQFKYHVDFEHLH--ID----EDTGAICVSRPTNPTGNVLTDEELEKLDALARQ--HNIPLLIDNAYGP 223 (416)
T ss_pred ecccccccccccccccCCCHHHcc--cC----CCceEEEEecCCCCCCccCCHHHHHHHHHHHHH--cCCcEEEeCCccc
Confidence 2223333333 2468888887 33 46799999999999999998 5567888888 9999999999863
Q ss_pred Cccee---ccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHH
Q 015729 181 CAIDF---RMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQL 255 (401)
Q Consensus 181 ~~~~~---~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 255 (401)
..... +.. ..+..+++.|.+|+...+.++|+++.++++++.+..... .+..+++...
T Consensus 224 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~~l~~~~~~~~~------------------~~~~~~s~~~ 285 (416)
T PRK09440 224 PFPGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADEEIIEALSNMNG------------------IISLAPGRLG 285 (416)
T ss_pred cCCCcchhhcCccccCCeEEEecccccCCCcceEEEEeCCHHHHHHHHHHHH------------------HhccCCCcHH
Confidence 21111 111 123468889999964334457999999988776653211 0011234433
Q ss_pred HHHHHHHHHHHHHhcH----HH-HHHHHHHHHHHHHHHHHHc--C--CccccCCCccCCceeEEEEcCC-CCCHHHHHHH
Q 015729 256 LYGLRAALDLIFEEGL----EN-VIERHRRLGKATRLAVEAW--G--LKNCTQKEEWFSDTVTAVIVPS-HINSSEIVRR 325 (401)
Q Consensus 256 ~~a~~~al~~~~~~g~----~~-~~~~~~~~~~~l~~~L~~~--g--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~ 325 (401)
..++.+++ ....+ .+ .++.++++.+.+.+.|.+. + +.+..+ ..+.++|+.+++ +.+..++.+.
T Consensus 286 q~~~~~~l---~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p----~gg~fiw~~~~~~~~~~~~~~~~ 358 (416)
T PRK09440 286 PAIAAEMI---ESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP----EGAIFLWLWFKDLPITTEELYQR 358 (416)
T ss_pred HHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecC----CCceEEEEECCCCCCCHHHHHHH
Confidence 33333333 22222 12 4555667777777777763 3 333232 245688888876 4677888888
Q ss_pred HHhhCCeEEccCCCCCC---------CcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 326 AWQRYNLSLGLGLNKVA---------GKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 326 L~~~~~i~v~~g~~~~~---------~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
|.+ .||.+.+|..... .+++||++.. +++++++++++|++++++
T Consensus 359 l~~-~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 359 LKA-RGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHH-CCEEEechHhhCCCCccccCCcCceEEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 865 4999999843211 2489998765 789999999999998865
No 186
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.93 E-value=3e-23 Score=196.63 Aligned_cols=333 Identities=13% Similarity=0.073 Sum_probs=224.6
Q ss_pred CCcccccCCC---cCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC
Q 015729 8 GKNHLFVPGP---VHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG 84 (401)
Q Consensus 8 ~~~~~~~~~p---~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g 84 (401)
+.+|.+...+ ..++++..+++...... |.....+.+|++.+++++|.+. +++++||++|+.+++.++++||
T Consensus 19 ~~v~iDlltds~t~ams~~~~~a~~~gd~~---Y~~~~g~~~Leeaia~~~g~~~---vv~t~~Gt~Al~la~~al~~pG 92 (431)
T cd00617 19 EDVYIDLLTDSGTGAMSDYQWAAMMLGDEA---YAGSKSFYDLEDAVQDLFGFKH---IIPTHQGRGAENILFSILLKPG 92 (431)
T ss_pred CCcCCCCCCCCCcHHHHHHHHHHHHhCCCc---cCCCCCHHHHHHHHHHHHCCCe---EEEcCCHHHHHHHHHHHhCCCC
Confidence 4453333333 46677778887754432 3334556799999999999875 8999999999999999999999
Q ss_pred CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC----------CCCChHHHHHHHhccCCCCceEEEEEecCCCc-ccc
Q 015729 85 DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG----------EGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVT 153 (401)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~----------~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-G~~ 153 (401)
|.| ++++ |+... .......|++++.+++++. +.+|++.+++.+++.+..++++|+++.++|++ |..
T Consensus 93 D~V-~~~~-~f~~~-~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~ 169 (431)
T cd00617 93 RTV-PSNM-HFDTT-RGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQP 169 (431)
T ss_pred CEE-ccCC-cccch-HHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCcc
Confidence 977 4554 44333 2456778999999998632 45899999999986432458899999999998 888
Q ss_pred cch---HHHHHHhhhcCCCcEEEEecccccCccee-----------ccCc------ccceEEEecCCCcccCCCcceEEE
Q 015729 154 NNL---SKVRKLLDEYRHPALFLVDGVSSICAIDF-----------RMDE------WGIDVALTGSQKALSLPTGMGIVC 213 (401)
Q Consensus 154 ~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~~~-----------~~~~------~~~di~~~s~~K~l~g~~g~G~l~ 213 (401)
.++ ++|.++|++ +|++||.|+++..+...+ .+.+ -..|.+.+|++|.+.++.| |+++
T Consensus 170 ~s~~~l~~i~eia~~--~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~ 246 (431)
T cd00617 170 VSMANLREVRELAHK--YGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLA 246 (431)
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEE
Confidence 864 567999999 999999999976532111 1111 1368899999998766655 7999
Q ss_pred ecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Q 015729 214 ASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (401)
Q Consensus 214 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (401)
.++ ++++++...... + .+....+..+...+.++..+++...+ .+ ..++..+.++++.+.|++.
T Consensus 247 ~~d~~l~~~~~~~~~~------------~-~~~~~~gG~~~r~~~A~A~gL~e~~~--~~-~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 247 LRDDELYEEARQRVVL------------Y-EGFVTYGGMAGRDMEALAQGLREAVE--ED-YLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred eCcHHHHHHHHHhccc------------c-CCccccccccHHHHHHHHHHHHhccc--HH-HHHHHHHHHHHHHHHHHHC
Confidence 987 577776532110 0 01101112333333444334432111 23 3344444558999999999
Q ss_pred CCccccCCCccCCceeEEEEcCC--------CCCHHHHHHHHHhhCCeEEcc-C-----CCCCCC-------cEEEEeec
Q 015729 293 GLKNCTQKEEWFSDTVTAVIVPS--------HINSSEIVRRAWQRYNLSLGL-G-----LNKVAG-------KVFRIGHL 351 (401)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~L~~~~~i~v~~-g-----~~~~~~-------~~~Ri~~~ 351 (401)
|+++..+. .+..+++.++. ..++.+++.+|.++.||.+.. | .++..+ ..+|+++.
T Consensus 311 G~~v~~P~----Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p 386 (431)
T cd00617 311 GVPIVEPA----GGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP 386 (431)
T ss_pred CCCccCCC----cceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc
Confidence 99887653 33566666531 235789998888887888542 3 222222 45999865
Q ss_pred c-cCCHHHHHHHHHHHHHHHHh
Q 015729 352 G-HLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 352 ~-~~~~~di~~~~~~i~~~l~~ 372 (401)
- ..|.+++|.+.++|.++++.
T Consensus 387 rr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 387 RRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred ccccCHHHHHHHHHHHHHHHhh
Confidence 4 56899999999999998864
No 187
>PLN02590 probable tyrosine decarboxylase
Probab=99.93 E-value=2.4e-23 Score=201.31 Aligned_cols=353 Identities=14% Similarity=0.080 Sum_probs=239.7
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCC------ceEEecCChhHHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG------TPFLIPTTGTGAWESAL 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~------~~i~~~~g~t~a~~~~~ 77 (401)
+.+.+.+++...+..+-|.+...... ..++....+..++.+.+++++|.+.. ..-++++|||+|+..++
T Consensus 132 ~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al 211 (539)
T PLN02590 132 SYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVV 211 (539)
T ss_pred CeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHH
Confidence 45666777666666666666664432 23566677888999999999998753 33688999999987766
Q ss_pred hc----cCC-------CCCeEEEEcCCcchHHHHHHHHHcCC---cEEEEeCCC--CCCCChHHHHHHHhccC--CCCce
Q 015729 78 TN----TLS-------PGDRIISFLIGQFSLLWIDQQQRLNF---NVDVVESDW--GEGAKLDVLASKLAADT--AHTIK 139 (401)
Q Consensus 78 ~~----~~~-------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~le~~~~~~~--~~~~~ 139 (401)
.+ .++ +.-.|++++..|+|. .+.++..|+ +++.|+++. ++++|+++|++++.++. +..|.
T Consensus 212 ~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv--~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~ 289 (539)
T PLN02590 212 LAARDRILKKVGKTLLPQLVVYGSDQTHSSF--RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPF 289 (539)
T ss_pred HHHHHHHHhhhcccCCCCEEEEecCCchHHH--HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcE
Confidence 33 111 111344555566665 477888887 689999884 46899999999997643 23577
Q ss_pred EEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceecc------CcccceEEEecCCCcccCCCcceEEE
Q 015729 140 AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRM------DEWGIDVALTGSQKALSLPTGMGIVC 213 (401)
Q Consensus 140 ~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~------~~~~~di~~~s~~K~l~g~~g~G~l~ 213 (401)
+|+.+...+.+|.+.|+++|.++|++ +|+|+|+|+|++.......- .-..+|.++.++|||+..|.+||+++
T Consensus 290 ~VvaTaGTT~tGaiDpl~~Ia~i~~~--~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~ll 367 (539)
T PLN02590 290 FICATVGTTSSAAVDPLVPLGNIAKK--YGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLW 367 (539)
T ss_pred EEEEEeCCCCCcccCCHHHHHHHHHH--hCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEE
Confidence 88889999999999999999999999 99999999999866533211 11357999999999999999999999
Q ss_pred ecHHH--HHHhccCCCCccccchHH--HHHHhhcCC-CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 015729 214 ASPKA--LEASKTAKSVRVFFDWKD--YIKFYNLGT-FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLA 288 (401)
Q Consensus 214 ~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~g~-~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~ 288 (401)
++++. ...+.. .. .|..... ....+..+. ....+.. .....++.+++.+-.+|+++..++..++++++.+.
T Consensus 368 vr~~~~l~~a~~~-~~--~YL~~~~~~~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~ 443 (539)
T PLN02590 368 VKDRYSLIDALKT-NP--EYLEFKVSKKDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDY 443 (539)
T ss_pred ecCHHHHHHHhhc-CH--HHhCCcccccccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88753 122211 11 1110000 000000000 0111222 45678899999999999999999999999999999
Q ss_pred HHHc-CCccccCCCccCCceeEEEEc-CCCCC---HH----HHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHH
Q 015729 289 VEAW-GLKNCTQKEEWFSDTVTAVIV-PSHIN---SS----EIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQ 358 (401)
Q Consensus 289 L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~---~~----~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~d 358 (401)
|++. +++++.+. .. .+++|+. |.+.+ .. ++.++|.+...+++.+.... ...++|+++.+ .++++|
T Consensus 444 l~~~~~fel~~~~---~l-~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~-g~~~lR~~i~n~~T~~~d 518 (539)
T PLN02590 444 VAQDPSFEVVTTR---YF-SLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALS-GKFVLRFAVGAPLTEEKH 518 (539)
T ss_pred HhcCCCeEEecCC---ce-EEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEEC-CEEEEEEEecCCCCCHHH
Confidence 9987 88887642 22 4666775 22222 12 45555554444555544322 12359998766 556899
Q ss_pred HHHHHHHHHHHHHhcC
Q 015729 359 LLGCLAGVEMILKDVG 374 (401)
Q Consensus 359 i~~~~~~i~~~l~~~~ 374 (401)
++.+++.|.+...+++
T Consensus 519 v~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 519 VTEAWQIIQKHASKFT 534 (539)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999877664
No 188
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=2.1e-23 Score=191.00 Aligned_cols=329 Identities=16% Similarity=0.168 Sum_probs=230.5
Q ss_pred ChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHH
Q 015729 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL 98 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~ 98 (401)
+.+.-++++.+...+.+-.. +....++++.+++++|.+. ++.++|||.|+.+++.++ ++|||+|+++...+....
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~~v~~FE~~~ae~~G~k~---ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa 88 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GPFVRRFEQAFAEYLGVKY---AVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA 88 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-ChHHHHHHHHHHHHhCCCe---EEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH
Confidence 55555666665443332222 5778899999999999988 788999999999999853 799999999988666553
Q ss_pred HHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a 177 (401)
......|+++++|+++++ +++|++.+|+++.+ ++|+|+.+|. .|...++++|.++|++ ||++||+|+|
T Consensus 89 --n~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~----~tKAIipVhl---~G~~~dm~~i~~la~~--~~l~vIEDaA 157 (374)
T COG0399 89 --NAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP----RTKAIIPVHL---AGQPCDMDAIMALAKR--HGLPVIEDAA 157 (374)
T ss_pred --HHHHHcCCeEEEEecCCcccCCCHHHHHHHccc----CCeEEEEehh---ccCCCCHHHHHHHHHH--cCCeEEEEcc
Confidence 456668999999999976 68999999999984 6799999974 7899999999999999 9999999999
Q ss_pred cccCcceeccCc--cc-ceEEEecCCCcccCCCcceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcH
Q 015729 178 SSICAIDFRMDE--WG-IDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSI 253 (401)
Q Consensus 178 ~~~~~~~~~~~~--~~-~di~~~s~~K~l~g~~g~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 253 (401)
|+.|+..-+-.- .| +-++.|-++|.+.++.| |.++.+ +++.++++..+..+...+-.........| .+..
T Consensus 158 qa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittgEG-Gav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G----~N~r- 231 (374)
T COG0399 158 QAHGATYKGKKVGSFGDIGAFSFHATKNLTTGEG-GAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELG----YNYR- 231 (374)
T ss_pred hhccCeecCcccccccceEEEEecCCCCccccCc-eEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecc----cccC-
Confidence 999986543221 12 44566668899977766 666655 45566555433211100000000001112 1222
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc-cCCceeEEEEcCCC-CCHHHHHHHHHhhC
Q 015729 254 QLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE-WFSDTVTAVIVPSH-INSSEIVRRAWQRY 330 (401)
Q Consensus 254 ~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~l~~~L~~~~ 330 (401)
+..+.+|+.+.+-+.+++..++.+++.+.+.+.|.++ ++.+...... ...+.+..+.+++. .+.+.+.+.|.++
T Consensus 232 --m~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~- 308 (374)
T COG0399 232 --LTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEA- 308 (374)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhC-
Confidence 2456777777666667889999999999999999987 5554433222 24456666667553 6778899999866
Q ss_pred CeE----EccCCC------C--C-----------CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 331 NLS----LGLGLN------K--V-----------AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 331 ~i~----v~~g~~------~--~-----------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
||. ..|-+. . . ..+.+++-.+..++++|+++++++|++++..
T Consensus 309 gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 309 GVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 544 333111 0 0 1244889888899999999999999998753
No 189
>PLN02271 serine hydroxymethyltransferase
Probab=99.93 E-value=4.3e-23 Score=195.47 Aligned_cols=350 Identities=13% Similarity=0.048 Sum_probs=241.6
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCC--------Cc---c-HHHHHHHHHHHHHHHhcCCCCce-E-EecCChhHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR--------SP---A-VPALTKTLLEDIKKIFKTTSGTP-F-LIPTTGTGAWE 74 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~--------~~---~-~~~~~~~l~~~la~~~g~~~~~~-i-~~~~g~t~a~~ 74 (401)
+...++|+=-.++++|++++.....+.+ .+ . ..++..-+.++..++||.+..++ + +-.-+|+.|+.
T Consensus 149 ~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~ 228 (586)
T PLN02271 149 KGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANF 228 (586)
T ss_pred cCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHH
Confidence 4567778878889999999988443321 11 1 23344456788888999775322 1 33458999999
Q ss_pred HHHhccCCCCCeEEEEcCCcchHHH-H------HHHHHcCCcEEEEe--CC-CCCCCChHHHHHHHhccCCCCceEEEEE
Q 015729 75 SALTNTLSPGDRIISFLIGQFSLLW-I------DQQQRLNFNVDVVE--SD-WGEGAKLDVLASKLAADTAHTIKAICIV 144 (401)
Q Consensus 75 ~~~~~~~~~gd~vl~~~~~~~~~~~-~------~~~~~~g~~~~~v~--~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~ 144 (401)
+++.++++|||+|+..+..|.++.. . ..+...|..+..++ ++ .++.+|.+++++.+.. .+||+|++.
T Consensus 229 aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~---~rPKLII~g 305 (586)
T PLN02271 229 AVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD---FRPKILICG 305 (586)
T ss_pred HHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh---cCCeEEEEC
Confidence 9999999999999998875555431 1 22344566566665 43 3567999999996544 578999998
Q ss_pred ecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccC---cccceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD---EWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 145 ~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
+..++ ...|++++.++|++ +|+++++|.+|..|.+..+.. -.++|+++++.||||.||.| |+++++++....
T Consensus 306 ~Sayp--r~~D~~~i~eIAde--vGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~ 380 (586)
T PLN02271 306 GSSYP--REWDYARFRQIADK--CGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKLR 380 (586)
T ss_pred chhcc--CcCCHHHHHHHHHH--cCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEeccccccc
Confidence 87777 67899999999999 999999999999987754421 12589999999999999998 888887764322
Q ss_pred hccCCCCccccc--hHHHHHHhhcC--CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccc
Q 015729 222 SKTAKSVRVFFD--WKDYIKFYNLG--TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNC 297 (401)
Q Consensus 222 ~~~~~~~~~~~~--~~~~~~~~~~g--~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~ 297 (401)
..+... ++..+ ..+..+.+... +.+-+++....++++..+++......++...++..+|++.|.+.|.+.|+++.
T Consensus 381 ~~g~~g-s~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv 459 (586)
T PLN02271 381 KQGMLL-SHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLV 459 (586)
T ss_pred ccCCcc-ccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEe
Confidence 221110 00000 00111111111 01122344555888888888877666788999999999999999999999998
Q ss_pred cCCCccCCceeEEEEcC-CCCCHHHHHHHHHhhCCeEEccCCC-----CCCCcEEEEeecccC----CHHHHHHHHHHHH
Q 015729 298 TQKEEWFSDTVTAVIVP-SHINSSEIVRRAWQRYNLSLGLGLN-----KVAGKVFRIGHLGHL----NELQLLGCLAGVE 367 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~~i~v~~g~~-----~~~~~~~Ri~~~~~~----~~~di~~~~~~i~ 367 (401)
... ..+.++.+.+. .+++...+.+.| +..||.+....- +.....+||+...-+ .++|++++.+.|.
T Consensus 460 ~gg---TdnHlvLvDl~~~g~~G~~ae~~L-e~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 460 TGG---TDNHLLLWDLTTLGLTGKNYEKVC-EMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred eCC---CCcceeeecCcccCCCHHHHHHHH-HHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 732 34456667762 355677777766 456998864422 122345999976633 4789999999998
Q ss_pred HHHH
Q 015729 368 MILK 371 (401)
Q Consensus 368 ~~l~ 371 (401)
++++
T Consensus 536 ~~~~ 539 (586)
T PLN02271 536 RAAQ 539 (586)
T ss_pred HHHh
Confidence 8876
No 190
>PLN02263 serine decarboxylase
Probab=99.93 E-value=7.7e-23 Score=192.82 Aligned_cols=298 Identities=13% Similarity=0.090 Sum_probs=223.9
Q ss_pred HHHHHHHHHHHHHHHhcCCC-CceEEecCChhHHHHHHHhcc--CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC
Q 015729 40 VPALTKTLLEDIKKIFKTTS-GTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~-~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 116 (401)
..+...++.+.+++++|.++ ..+-++|+|||+++..++.+- ..+...+++++..|+|.. +.++..|++++.|+.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~--KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF--KAARMYRMECVKVDTL 208 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH--HHHHhcCCcceEeccC
Confidence 45677789999999999875 345789999999998877442 223346777778787764 7889999999999999
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCc-----EEEEecccccCccee------
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA-----LFLVDGVSSICAIDF------ 185 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~-----~li~D~a~~~~~~~~------ 185 (401)
.++++|+++|++++.+++ .+|.+|+.+.+++++|.+.|+++|.++|++ +|+ |+++|+|++...+++
T Consensus 209 ~~g~mD~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDpi~eIa~i~~~--~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 209 VSGEIDCADFKAKLLANK-DKPAIINVNIGTTVKGAVDDLDLVIKTLEE--CGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred CCCcCcHHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCCHHHHHHHHHH--cCCccCCeeEEEeccchhhHhhhcccccc
Confidence 999999999999998765 467788889999999999999999999999 775 999999987655432
Q ss_pred -ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHH
Q 015729 186 -RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD 264 (401)
Q Consensus 186 -~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~ 264 (401)
++.. .+|.++.++|||++.|.++|+++++++..+.+... ..|.... .....++.+....+.++.++.
T Consensus 286 ~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~---~~Yl~~~--------d~ti~gSR~g~~al~lW~~L~ 353 (470)
T PLN02263 286 VTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN---VEYLASR--------DATIMGSRNGHAPIFLWYTLN 353 (470)
T ss_pred cCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhhhccC---hHhhCCC--------CCCcCCCCCcHHHHHHHHHHH
Confidence 3332 48999999999999999999999998765433221 1111110 011233444445678899999
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCc
Q 015729 265 LIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGK 344 (401)
Q Consensus 265 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~ 344 (401)
.+..+|+.+..++..++++++.+.|++.|+...... .+. .+.|..|. ... . .+ |..+.. .++
T Consensus 354 ~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p---~s~-~V~f~~p~---~~~----~-~~-gW~L~~-----~~~ 415 (470)
T PLN02263 354 RKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNE---LSS-TVVFERPK---DEE----F-VR-RWQLAC-----QGN 415 (470)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCC---Cce-EEEEecCc---hHH----h-hc-ceEEcc-----CCC
Confidence 888889999999999999999999999988776532 233 44454431 111 1 12 444432 245
Q ss_pred EEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 345 VFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 345 ~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+++.+...++++.+|++++.|++..+.
T Consensus 416 ~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 416 IAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 6899888878999999999999988763
No 191
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=3e-23 Score=195.37 Aligned_cols=327 Identities=12% Similarity=0.116 Sum_probs=212.3
Q ss_pred ChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHH
Q 015729 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL 98 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~ 98 (401)
+.++.++++.+...............++++.+++++|.+. +++++|+|+|+..++.++ ++|||+|+++.++|++..
T Consensus 9 ~~~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~~~---~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~ 85 (376)
T TIGR02379 9 VTGQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGTKK---ALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA 85 (376)
T ss_pred CCHHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCCCe---EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHH
Confidence 4455566666543322222234667899999999988754 899999999999888776 899999999999877654
Q ss_pred HHHHHHHcCCcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a 177 (401)
......|++++.++++.+ ..+|++++++++++ ++++|+. .+++|...|+++|.++|++ +|++||+|++
T Consensus 86 --~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~----~tk~Iip---~~~~G~~~d~~~I~~la~~--~~i~vIeDaa 154 (376)
T TIGR02379 86 --NAFVLRGAKIVFVDIRPDTMNIDETLIESAITH----RTKAIVP---VHYAGVACDMDTIMALANK--HQLFVIEDAA 154 (376)
T ss_pred --HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc----CceEEEE---eCCCCCccCHHHHHHHHHH--CCCEEEEECc
Confidence 445678999999999876 47899999998874 5688864 4578999999999999999 9999999999
Q ss_pred cccCcceeccCcccc--eEEEec--CCCcccCC-CcceEEEec-HHHHHHhccCCCCcccc-c-hHHHHHH---hhcCCC
Q 015729 178 SSICAIDFRMDEWGI--DVALTG--SQKALSLP-TGMGIVCAS-PKALEASKTAKSVRVFF-D-WKDYIKF---YNLGTF 246 (401)
Q Consensus 178 ~~~~~~~~~~~~~~~--di~~~s--~~K~l~g~-~g~G~l~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~~---~~~g~~ 246 (401)
|+.|.. ++....+. |+.++| ..|.+..+ .| |+++.+ +++.+++...+..+... + ....... ...|.
T Consensus 155 ~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~g-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~- 231 (376)
T TIGR02379 155 QGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGEG-GALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGS- 231 (376)
T ss_pred cccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCCc-eEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecc-
Confidence 998764 23222332 555555 44666544 44 666554 77777666433211000 0 0000000 00121
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc---C-Ccccc-CCCccCCceeEEEEcCCCCCHHH
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW---G-LKNCT-QKEEWFSDTVTAVIVPSHINSSE 321 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
.+-.+.. .+++...+-..+++..++.+++++.+.+.|..+ + ..+.. ++.....+..+.+.++.+.+.++
T Consensus 232 -n~~~~~~-----~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~ 305 (376)
T TIGR02379 232 -SYLPSEL-----QAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNE 305 (376)
T ss_pred -cCCccHH-----HHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHH
Confidence 1112222 233332222235667777778888888888664 2 22221 11112233455667755456889
Q ss_pred HHHHHHhhCCeEEccCCCCC------------C----------CcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 322 IVRRAWQRYNLSLGLGLNKV------------A----------GKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 322 l~~~L~~~~~i~v~~g~~~~------------~----------~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.+.|.++ ||.++.++.+. . ...+.+.++..++++|++++++.|++++
T Consensus 306 l~~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 306 LIKYLKEQ-EIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHC-CCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 99999876 98876443210 0 2348888888999999999999998764
No 192
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.93 E-value=4.6e-23 Score=173.91 Aligned_cols=338 Identities=15% Similarity=0.152 Sum_probs=242.7
Q ss_pred CcccccC--CCcCChHHHHHHHccCcCCCC--Cc---c-----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 9 KNHLFVP--GPVHIPDQVIRAMNRNNEDYR--SP---A-----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 9 ~~~~~~~--~p~~~~~~v~~a~~~~~~~~~--~~---~-----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
+..+..| -...++++..+++-+++..+. .. + ....+..+.+.+++++|.+. +-+|.|+-+|=.++
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~---~R~t~GARe~Kfav 92 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDE---VRVTAGAREAKFAV 92 (382)
T ss_pred CccccChhhccCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCce---eeecccchhhHHHH
Confidence 3444444 245678889999998765431 00 0 11236677888999999987 78999999999999
Q ss_pred HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC--CCCCCChHHHHHHHhc---cCCCCceEEEEEecCCCcc
Q 015729 77 LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAA---DTAHTIKAICIVHNETATG 151 (401)
Q Consensus 77 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~le~~~~~---~~~~~~~~i~~~~~~n~tG 151 (401)
|.++.++||-|++..+.|++.+ -.+++.|+++..||.. ++..++++...+.+++ ..++.+.+.+++|+....|
T Consensus 93 Mhal~~~gd~vV~D~~aHYtty--vAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YG 170 (382)
T COG1103 93 MHALCKEGDWVVVDSLAHYTTY--VAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYG 170 (382)
T ss_pred HHHhccCCCEEEEcCcchHHHH--HHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcC
Confidence 9999999999999999999876 4589999999999953 2346788888777765 2223478889999999999
Q ss_pred cccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
.+.|.+.++++|++ +|++++..+|+..|.++.+....++|+++.|+||.+....++|++.++.++.+.........
T Consensus 171 Nl~Dakkva~ic~e--~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~-- 246 (382)
T COG1103 171 NLADAKKVAKICRE--YGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRA-- 246 (382)
T ss_pred CchhhHHHHHHHHH--cCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccc--
Confidence 99999999999999 99999999999999999999999999999999999988888999999999877654322110
Q ss_pred cchHHHHHHhh-cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeE
Q 015729 232 FDWKDYIKFYN-LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 232 ~~~~~~~~~~~-~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 309 (401)
+.- +..+ -|. |.--..+..+.+++-...+- .+......+.++++.+.|+++ |+...+..+. ...++
T Consensus 247 ~~~----KEvellGC----T~rGapivTlmASfP~V~eR--VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk--~HdLm 314 (382)
T COG1103 247 FPK----KEVELLGC----TVRGAPIVTLMASFPHVVER--VKRWDEEVEKARWFVAELEKIGGVKQLGERPK--NHDLM 314 (382)
T ss_pred ccc----ceeeeecc----cccCchHHHHHhcCHHHHHH--HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCc--cccee
Confidence 000 0011 122 22222233444444443321 234455567788999999998 5877765443 33466
Q ss_pred EEEcCCC--C------CHHHHHHHHHhhCCeE-EccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 310 AVIVPSH--I------NSSEIVRRAWQRYNLS-LGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 310 ~~~~~~~--~------~~~~l~~~L~~~~~i~-v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.|+.|.= + ...-+.+.|+++ ||. +.+| .-.++.+|.++ +++|+++..++++++++++-
T Consensus 315 ~Fetp~f~eIakk~~r~gyFlY~ELK~R-gI~GI~~G----~Tk~~K~svyG-l~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 315 KFETPVFHEIAKKHKRKGYFLYEELKKR-GIHGIQPG----QTKYFKLSVYG-LSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred eecCchHHHHHHhCcCCceeeHHHHHhc-CccccccC----ceeEEEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 6776520 0 111255666655 543 3333 23579999888 99999999999999998753
No 193
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.93 E-value=5.7e-23 Score=199.07 Aligned_cols=314 Identities=19% Similarity=0.130 Sum_probs=213.5
Q ss_pred CCccHHHHHHHHHHHHHHHhcC------------CCCceEEecCChhHHHHHHHhc----cCC-----------------
Q 015729 36 RSPAVPALTKTLLEDIKKIFKT------------TSGTPFLIPTTGTGAWESALTN----TLS----------------- 82 (401)
Q Consensus 36 ~~~~~~~~~~~l~~~la~~~g~------------~~~~~i~~~~g~t~a~~~~~~~----~~~----------------- 82 (401)
.++....+..++.+.++++++. +....-++++|||+|+..++.+ .+.
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 4566777788888888888852 1123368899999999876632 221
Q ss_pred -----CCCeEEEEcCCcchHHHHHHHHHcCC---cEEEEeCCCCCCCChHHHHHHHhccCCCCceEE--EEEecCCCccc
Q 015729 83 -----PGDRIISFLIGQFSLLWIDQQQRLNF---NVDVVESDWGEGAKLDVLASKLAADTAHTIKAI--CIVHNETATGV 152 (401)
Q Consensus 83 -----~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i--~~~~~~n~tG~ 152 (401)
++..|+++..+|+|.. +.++..|+ +++.|+++.++.+|+++|++.++++...+++.+ +.+.+++.+|.
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~--kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGa 280 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLG--KAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGN 280 (522)
T ss_pred hhccCCceEEEECCCchHHHH--HHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCC
Confidence 2346777778888764 66777787 899999999999999999999874221233444 44466789999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcceec-----cCc-ccceEEEecCCCcccCCCcceEEEecH-HHHHHhccC
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR-----MDE-WGIDVALTGSQKALSLPTGMGIVCASP-KALEASKTA 225 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-----~~~-~~~di~~~s~~K~l~g~~g~G~l~~~~-~~~~~~~~~ 225 (401)
+.|+++|.++|++ +|+|+++|+|++.+.+..+ +.. .++|.+++++|||+.+|.|+|++++++ ...+.+...
T Consensus 281 iDpl~eIa~i~~~--~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~ 358 (522)
T TIGR03799 281 IDPLDEMADIAQE--LGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHH 358 (522)
T ss_pred cCCHHHHHHHHHH--cCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccC
Confidence 9999999999999 9999999999987655443 333 278999999999999999999999875 444444331
Q ss_pred CCCcccc-chHHH-HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 226 KSVRVFF-DWKDY-IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 226 ~~~~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
..+... ...+. ...++ ++.+.. ...++++++.+...|++.+.++..++++++.+.|++. ++++..+.
T Consensus 359 -~~Yl~~~~~~d~~~~~le------gsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p-- 428 (522)
T TIGR03799 359 -AEYILRKGSKDLGSHTLE------GSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP-- 428 (522)
T ss_pred -cchhcCCCCCccccceee------cCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC--
Confidence 111000 00000 01122 223332 3468999999999999999999999999999999987 88887642
Q ss_pred cCCceeEEEEc-CCCCC-----------------H----HHHHHHHHhhCCeEEccCCC-----CCCC-cEEEEeecc-c
Q 015729 303 WFSDTVTAVIV-PSHIN-----------------S----SEIVRRAWQRYNLSLGLGLN-----KVAG-KVFRIGHLG-H 353 (401)
Q Consensus 303 ~~~~~~~~~~~-~~~~~-----------------~----~~l~~~L~~~~~i~v~~g~~-----~~~~-~~~Ri~~~~-~ 353 (401)
.. .+++|++ |.+.. . ..+.+++.+...+++....- ...+ ..+|+++.+ .
T Consensus 429 -~l-~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~ 506 (522)
T TIGR03799 429 -EL-CLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPL 506 (522)
T ss_pred -Cc-cEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCC
Confidence 23 3566664 33210 0 24555555553455443321 1112 349998755 5
Q ss_pred CCHHHHHHHHHH
Q 015729 354 LNELQLLGCLAG 365 (401)
Q Consensus 354 ~~~~di~~~~~~ 365 (401)
+|++|++.+++.
T Consensus 507 tt~~~i~~~l~~ 518 (522)
T TIGR03799 507 TTHEILQDILDE 518 (522)
T ss_pred CCHHHHHHHHHH
Confidence 668889887764
No 194
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.93 E-value=4.7e-23 Score=197.26 Aligned_cols=307 Identities=18% Similarity=0.158 Sum_probs=209.6
Q ss_pred hHHHHHHHccCcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC---------CCC-CeE
Q 015729 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---------SPG-DRI 87 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~---------~~g-d~v 87 (401)
+|.+.+++.+.... +.. ....+...++.+.++++.+.+ .+++++||++|++.++.... ++| ++|
T Consensus 59 ~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~v 135 (401)
T PRK00854 59 HPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGSH---KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEI 135 (401)
T ss_pred CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceE
Confidence 45555555553321 111 112356778999999998764 38999999999999986542 123 688
Q ss_pred EEEcCCcchHHHHHHHH-----------HcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-
Q 015729 88 ISFLIGQFSLLWIDQQQ-----------RLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~-----------~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~- 155 (401)
++....+|+........ ....++..++. .|++++++.+. +++++|++++++||+|.+.|
T Consensus 136 i~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~----~~~~aii~e~~~~~~G~~~~~ 206 (401)
T PRK00854 136 IVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAIT----PNTVAFLVEPIQGEAGVIIPP 206 (401)
T ss_pred EEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhC----CCeEEEEEccccCCCCCcCCC
Confidence 99888887764221110 00112333332 27999999886 36799999999999999987
Q ss_pred ---hHHHHHHhhhcCCCcEEEEecccc-cCcce--e--ccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCC
Q 015729 156 ---LSKVRKLLDEYRHPALFLVDGVSS-ICAID--F--RMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAK 226 (401)
Q Consensus 156 ---l~~i~~l~~~~~~~~~li~D~a~~-~~~~~--~--~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~ 226 (401)
+++|.++|++ +|+++|+|++|+ +|... + +.....+|+++++ |+++++. ++|+++.+++..+.+....
T Consensus 207 ~~~l~~l~~l~~~--~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~~~~ 282 (401)
T PRK00854 207 AGYFTRVRELCTA--NNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGVLKPGQ 282 (401)
T ss_pred HHHHHHHHHHHHH--cCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhcccCCC
Confidence 8999999999 999999999997 43321 1 1122346888775 9997663 5799999999877664321
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
. +. .++.++..+++..++++.+.+.+ ..++++++.+++.+.|++++........ ..+
T Consensus 283 ~----------------~~--t~~~~~~~~aa~~a~L~~l~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~--g~g 339 (401)
T PRK00854 283 H----------------GS--TFGGNPLACAVARAALKVLTEEG---MIENAAEMGAYFLEGLRSIRSNIVREVR--GRG 339 (401)
T ss_pred C----------------CC--CCCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhhccCceEEEe--ccc
Confidence 0 11 22346666777888888766533 5678888999999999887543221111 234
Q ss_pred eeEEEEc-CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 307 TVTAVIV-PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 307 ~~~~~~~-~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.++.+.+ ++..+..++++.|.++ ||.+.+. .++++|++++..++++|+++++++|++++.
T Consensus 340 ~~~~i~~~~~~~~~~~~~~~L~~~-GV~v~~~----~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 340 LMLAVELEPEAGGARQYCEALKER-GLLAKDT----HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred eEEEEEEecCchhHHHHHHHHHHC-CeEEecC----CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 4555544 3333567899999876 9998632 246899998888999999999999998764
No 195
>PRK08637 hypothetical protein; Provisional
Probab=99.93 E-value=8.3e-23 Score=194.44 Aligned_cols=336 Identities=13% Similarity=0.040 Sum_probs=208.0
Q ss_pred ccCCCcCChHHHHHHHccCc-CCCCCccHHHHHHHHHHHHHHHhcC-----CC--CceEEecCChhHHHHHHHhccCCCC
Q 015729 13 FVPGPVHIPDQVIRAMNRNN-EDYRSPAVPALTKTLLEDIKKIFKT-----TS--GTPFLIPTTGTGAWESALTNTLSPG 84 (401)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~-----~~--~~~i~~~~g~t~a~~~~~~~~~~~g 84 (401)
..+++..+.+.+.+++.+.. ....++.......++|+.+++++.. .. .+++++|+|+++|+..++.+++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~g 93 (388)
T PRK08637 14 TEKGGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQG 93 (388)
T ss_pred ecCCCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCC
Confidence 34444466677777776532 2222344445577888888876632 21 1458999999999999999999999
Q ss_pred CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchH---HHH
Q 015729 85 DRIISFLIGQFSLLWIDQQQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS---KVR 160 (401)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~---~i~ 160 (401)
|+|++++|+|+.+. .......|++++.+++. .++.+|++++++.++....+..+++++++|+||||.+++.+ +|+
T Consensus 94 d~Vlv~~P~y~~~~-~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~ 172 (388)
T PRK08637 94 DTVLLPDHNWGNYK-LTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIV 172 (388)
T ss_pred CEEEEcCCCCccHH-HHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999776554 22234579999999983 45578999999988611102335677888999999999755 455
Q ss_pred HHhhh--c-CCCcEEEEecccccCcce-------e-cc-Ccc-cc-eEEEecCCCccc-CCCcceEEEec------HHHH
Q 015729 161 KLLDE--Y-RHPALFLVDGVSSICAID-------F-RM-DEW-GI-DVALTGSQKALS-LPTGMGIVCAS------PKAL 219 (401)
Q Consensus 161 ~l~~~--~-~~~~~li~D~a~~~~~~~-------~-~~-~~~-~~-di~~~s~~K~l~-g~~g~G~l~~~------~~~~ 219 (401)
++|++ + .++++||+|+++...... + .. ... ++ .+.+.|.+|.++ .+..+||+++. +++.
T Consensus 173 ~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~ 252 (388)
T PRK08637 173 EAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVK 252 (388)
T ss_pred HHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHH
Confidence 55542 1 279999999998633210 0 00 111 22 233458889653 23457999864 4555
Q ss_pred HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHc----CC
Q 015729 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI-FEEGLENVIERHRRLGKATRLAVEAW----GL 294 (401)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-~~~g~~~~~~~~~~~~~~l~~~L~~~----g~ 294 (401)
+.+.... ....... .++.+.....++.++++.- ....+++.+..++++.+.+.+.|++. ++
T Consensus 253 ~~~~~~~------------~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~ 318 (388)
T PRK08637 253 EALEKKV------------KGLIRSN--ISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAW 318 (388)
T ss_pred HHHHHHH------------HHHhhcc--cCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 4443210 0000000 1123333333333343210 00112334445666666777777664 34
Q ss_pred ccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 295 KNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+..+ .++.++|++++ +.+..++.+.|.+++||.+... ..+++||++.. .+++++++++++|.++++.+
T Consensus 319 ~~~~~----~~g~~~~~~l~-~~~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 319 QAYPF----NSGYFMCLKLK-GVDAEELRVHLLEKYGIGTIAL----NETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ccccc----cceEEEEecCC-hHHHHHHHHHHhhhcceEEEec----cCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 43332 34568888885 3456789898876569887632 35689997655 78999999999999988754
No 196
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.93 E-value=9.6e-23 Score=180.62 Aligned_cols=339 Identities=17% Similarity=0.187 Sum_probs=243.0
Q ss_pred CcccccCCCcCChHHHHHHHcc-----Cc-------CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEec-CChhHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNR-----NN-------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIP-TTGTGAWES 75 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~-----~~-------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~a~~~ 75 (401)
+.++|++||..++++|++.+++ .. .+||+..+.....+.++.++++++.+..+.|+|+ +|+|.+...
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~ 84 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAM 84 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHH
Confidence 5899999999999999988777 22 3588888999999999999999999988778775 566677888
Q ss_pred HHhccCCCCCe--EEEEcCCcchHHHHHHHHHcCC--cEEEEeC---CCCCCCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 76 ALTNTLSPGDR--IISFLIGQFSLLWIDQQQRLNF--NVDVVES---DWGEGAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 76 ~~~~~~~~gd~--vl~~~~~~~~~~~~~~~~~~g~--~~~~v~~---~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
+..+++..... |.+ ++++....+.++..+- ++..+.. +....++++... +++ +..-+.+++.++
T Consensus 85 ~p~nLl~~~~~~yv~~---g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~----~~ayv~~~~NeT 155 (365)
T COG1932 85 APMNLLGKRGTDYVDT---GAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD----NDAYVHFCWNET 155 (365)
T ss_pred HHHhhhcccCceeEee---eehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCC----CccEEEEecCCc
Confidence 88888876543 444 4555543344555553 2222221 222233443322 221 224589999999
Q ss_pred CcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC
Q 015729 149 ATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (401)
Q Consensus 149 ~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~ 228 (401)
.+|+..+. ....+.+.++++|.++.+++.++|+.+ .|++.++.+|.+ ||.|++++++++++++++.....+
T Consensus 156 i~Gv~v~~------~p~~~~~~~~v~D~SS~ilsr~iDvsk--~dviyagaQKnl-GpaGltvvIvr~~~l~r~~~~~~P 226 (365)
T COG1932 156 ISGVEVPE------LPDIGSDGLLVADASSAILSRPIDVSK--YDVIYAGAQKNL-GPAGLTVVIVRPDLLERAESYTLP 226 (365)
T ss_pred ccceEccC------CCCCCCCceEEEecccHHhcCCCChhH--cceEEEehhhcc-CccceEEEEEcHHHHhcccccCCc
Confidence 99998871 111223378999999999999999884 899999999999 699999999999999988764211
Q ss_pred ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 229 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
. .+++.. ...++ +..+||+...++.+..++++++..| ++.+.++..+.++.|.+.+++.++-.....+..+|.+
T Consensus 227 ~-if~y~~---~~~~~-s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~m 301 (365)
T COG1932 227 S-IFDYLT---HADNG-SMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRM 301 (365)
T ss_pred h-Hhhchh---hhccC-CccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccce
Confidence 1 122211 23333 4588999999999999999999876 9999999999999999999997543333233557878
Q ss_pred eEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 308 VTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.|.+.+.--.+.+...+.++ |+..--|... .+.+|++++.+.+.++++.+++.+++..++.
T Consensus 302 nV~f~~~~~~ld~~fv~eae~~-gl~~lkGhr~--vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 302 NVTFTLVDAELDKGFVAEAEAA-GLIYLKGHRS--VGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred eEEEEcCcHHHHHHHHHHHHHc-CCceeccccC--CCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 8888875432224555555545 6665556322 3339999999999999999999998887653
No 197
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=3.4e-23 Score=197.00 Aligned_cols=295 Identities=14% Similarity=0.102 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHH--HH-HHHHcCCcEEEEeCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLW--ID-QQQRLNFNVDVVESD 116 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--~~-~~~~~g~~~~~v~~~ 116 (401)
......++++.+++++|.+. +++++||++|+..++.+++++||+|+++.+.|.+... .. ..+..|++++.++..
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~~---~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~ 150 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTEA---AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDIT 150 (418)
T ss_pred CChhHHHHHHHHHHHhCCCe---EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCC
Confidence 45678899999999999876 6789999999999999999999999999887655531 11 224478887777643
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEE
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVAL 196 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~ 196 (401)
|+++++++++++ ++++|++++++||||.+.|+++|.++|++ +|++||+|++|+.+. ++....+.|+++
T Consensus 151 -----d~e~l~~~i~~~---~tklV~lesp~NPtG~v~dl~~I~~la~~--~gi~livDea~~~~~--~~~~~~g~divv 218 (418)
T PLN02242 151 -----DLEAVKKAVVPG---KTKVLYFESISNPTLTVADIPELARIAHE--KGVTVVVDNTFAPMV--LSPARLGADVVV 218 (418)
T ss_pred -----CHHHHHHhcCcC---CCEEEEEecCCCCCCcccCHHHHHHHHHH--hCCEEEEECCCCccC--CCHHHcCCcEEE
Confidence 899999988642 47999999999999999999999999999 999999999986443 344456799999
Q ss_pred ecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 197 TGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 197 ~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
.|.+|++++... .|+++.++++++.+...... .....| ..++. +.+++.......+...
T Consensus 219 ~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~----------~~~~~g----~~~~~-----~~A~l~~~~l~tl~~r 279 (418)
T PLN02242 219 HSISKFISGGADIIAGAVCGPAELVNSMMDLHHG----------ALMLLG----PTMNP-----KVAFELSERLPHLSLR 279 (418)
T ss_pred EeCccccCCCCCceEEEEEcCHHHHHHHHHHhhh----------hhhccC----CCCCH-----HHHHHHHcCCCcHHHH
Confidence 999999965432 48999998887766532110 000112 12222 1222222222235667
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCC-C---c-----------cCCceeEEEEcCCCCCHHHHHHHHHhhC----CeEEc
Q 015729 275 IERHRRLGKATRLAVEAWGLKNCTQK-E---E-----------WFSDTVTAVIVPSHINSSEIVRRAWQRY----NLSLG 335 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~g~~~~~~~-~---~-----------~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~i~v~ 335 (401)
+++..++++.+.+.|++.++++..+. + . ...+.+++|.+.+...+..+.+.|. -. .+.+.
T Consensus 280 ~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~-~~~~~~~~~~s 358 (418)
T PLN02242 280 MKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQ-NSTQFGFMAVS 358 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhh-cccccceeeec
Confidence 78899999999999999876665332 0 0 1245688888832112334444442 11 22333
Q ss_pred cCCC------C-----------------CCCcEEEEeecccCCHH-HHHHHHHHHHHHHHhc
Q 015729 336 LGLN------K-----------------VAGKVFRIGHLGHLNEL-QLLGCLAGVEMILKDV 373 (401)
Q Consensus 336 ~g~~------~-----------------~~~~~~Ri~~~~~~~~~-di~~~~~~i~~~l~~~ 373 (401)
.|.. + ...+.+|||+.. | |.|.+++.|+.+|+.+
T Consensus 359 lG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 359 LGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKALSAM 416 (418)
T ss_pred CCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHh
Confidence 3321 0 013569998654 6 3777888888777654
No 198
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.93 E-value=6.2e-23 Score=196.52 Aligned_cols=311 Identities=18% Similarity=0.155 Sum_probs=212.1
Q ss_pred ChHHHHHHHccCcCC--CCCcc-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC----------CCCCe
Q 015729 20 IPDQVIRAMNRNNED--YRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL----------SPGDR 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~~-~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~----------~~gd~ 86 (401)
.+|.|++++.+.... +.... ..+...++++.++++.+.+ .++++++|++|++.++.... ..+++
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~ 124 (400)
T PTZ00125 48 CHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGYD---KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAK 124 (400)
T ss_pred CCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCe
Confidence 356677666664321 21111 2356778889888887653 48999999999999886532 13478
Q ss_pred EEEEcCCcchHHHHHHHHHcCCc-----------EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFN-----------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
|++.+.++|+..+..+....+.. +..++ ..|++++++.++. +++++|+++.++|++|.+.+
T Consensus 125 vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~l~~---~~~~~v~~ep~~~~~G~~~~ 196 (400)
T PTZ00125 125 IIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVD-----YNDVEALEKLLQD---PNVAAFIVEPIQGEAGVIVP 196 (400)
T ss_pred EEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeC-----CCCHHHHHHHhCC---CCeEEEEEcCccCCCCCccC
Confidence 99999888887644333221111 11111 1289999999862 46899999999999999997
Q ss_pred ----hHHHHHHhhhcCCCcEEEEecccc-cCc----ceeccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccC
Q 015729 156 ----LSKVRKLLDEYRHPALFLVDGVSS-ICA----IDFRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTA 225 (401)
Q Consensus 156 ----l~~i~~l~~~~~~~~~li~D~a~~-~~~----~~~~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~ 225 (401)
+++|.++|++ +|+++|+|++|. +|. ...+.....+|++++| |+++++. ++|++++++++.+.+...
T Consensus 197 ~~~~l~~l~~l~~~--~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~~~~~~~~~ 272 (400)
T PTZ00125 197 DDGYLKQVYELCKK--YNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDDVMLVIKPG 272 (400)
T ss_pred CHHHHHHHHHHHHH--cCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHHHHhhccCC
Confidence 8999999999 999999999986 321 1122223346887765 9997664 789999999988877542
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CC-ccccCCCcc
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GL-KNCTQKEEW 303 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~ 303 (401)
.. +. .++.++..+++..++++.+.+++ ..++..++.+++++.|+++ +. ...... .
T Consensus 273 ~~----------------~~--t~~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~--~ 329 (400)
T PTZ00125 273 EH----------------GS--TYGGNPLACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKKSPWVKEI--R 329 (400)
T ss_pred CC----------------CC--CCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCCeEEE--e
Confidence 11 11 12244555677777888776654 3455666777778877764 21 111111 1
Q ss_pred CCceeEEEEcCC--CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 304 FSDTVTAVIVPS--HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 304 ~~~~~~~~~~~~--~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..+.++++.++. +.+..++++.|.++ ||.+.++ .++++||++...++++|+++++++|+++++++
T Consensus 330 ~~g~~~~v~~~~~~~~~~~~~~~~l~~~-Gv~v~~~----~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 330 GKGLLNAIVFDHSDGVNAWDLCLKLKEN-GLLAKPT----HDNIIRFAPPLVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred cccEEEEEEEccCcchHHHHHHHHHHHC-CeEEeec----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 234567777753 34567888999866 9998764 35689999887889999999999999998875
No 199
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=7.4e-23 Score=192.19 Aligned_cols=213 Identities=13% Similarity=0.129 Sum_probs=161.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
....+|++.|+++.+... +++++||++|+..++.+++++||+|+++++.|.+.. ........|+++..++.+
T Consensus 61 pt~~~Le~~iA~le~~~~---~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~--- 134 (394)
T PRK09028 61 PTHFAFQAAIVELEGGAG---TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM--- 134 (394)
T ss_pred chHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC---
Confidence 346689999999987653 789999999999999999999999999999876665 223456688888877633
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
+.+.+++.+++ ++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+. ..+..++|+|+++.|.
T Consensus 135 --~~e~l~~~l~~----~TklV~lespsNPtg~v~dl~~I~~la~~--~g~~lvvD~t~a~p~-~~~Pl~~GaDivv~S~ 205 (394)
T PRK09028 135 --IGEGIRELIRP----NTKVLFLESPGSITMEVQDVPTLSRIAHE--HDIVVMLDNTWASPI-NSRPFEMGVDISIQAA 205 (394)
T ss_pred --CHHHHHHhcCc----CceEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCccccc-cCCccccCceEEEEeC
Confidence 56788888863 57999999999999999999999999999 999999999998764 3445578999999999
Q ss_pred CCcccCCCcc--eEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHH
Q 015729 200 QKALSLPTGM--GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (401)
Q Consensus 200 ~K~l~g~~g~--G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 277 (401)
+||++|+..+ |+++.+++.++++... . ...| .+.++..+. ..++-++ -+.-++++
T Consensus 206 tK~l~Gh~d~~~G~~~~~~~~~~~l~~~-------------~-~~~G----~~~~p~~a~---l~~rgl~--TL~lR~~~ 262 (394)
T PRK09028 206 TKYIVGHSDVMLGTATANEKHWDQLREH-------------S-YLMG----QCTSPDDVY---LAMRGLR--TLGVRLAQ 262 (394)
T ss_pred CeEecCCCCEEEEEEECCHHHHHHHHHH-------------H-HhcC----CCCCHHHHH---HHHcccC--cHHHHHHH
Confidence 9999877543 7777777765544321 0 0113 235553222 2222221 25678889
Q ss_pred HHHHHHHHHHHHHHc
Q 015729 278 HRRLGKATRLAVEAW 292 (401)
Q Consensus 278 ~~~~~~~l~~~L~~~ 292 (401)
..+++..+.+.|++.
T Consensus 263 ~~~na~~la~~L~~~ 277 (394)
T PRK09028 263 HEKNALKVANWLATR 277 (394)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999975
No 200
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=1e-22 Score=194.20 Aligned_cols=304 Identities=16% Similarity=0.125 Sum_probs=206.2
Q ss_pred ChHHHHHHHccCcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC---------CCC-Ce
Q 015729 20 IPDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---------SPG-DR 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~---------~~g-d~ 86 (401)
-+|.+.+++.+.... +.. ....+...++.++++++.+.+ .++++++|++|++.++.... ++| ++
T Consensus 57 ~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ 133 (396)
T PRK04073 57 RHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGKD---MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAE 133 (396)
T ss_pred CCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCCC---eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCE
Confidence 456666666553321 111 112345567888888887643 48999999999999885421 134 67
Q ss_pred EEEEcCCcchHHHHHHHHHcCC------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
|+..+.++|+.....+.- .+. .+..++.+ |++++++.++ ++++++++++++||+|.+.
T Consensus 134 ii~~~~~~HG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~----~~~~~viiep~~~~~G~~~ 203 (396)
T PRK04073 134 IIACEGNFHGRTMAAVSL-SSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAAIT----PNTAAFLVEPIQGEAGINI 203 (396)
T ss_pred EEEECCCcCCCCHHHHhh-cCCcccccCCCCCCCCceEeCCC-----CHHHHHHhcc----cCeEEEEEcCccCCCCCcc
Confidence 888888888765322211 111 12223222 7899998886 3579999999999999998
Q ss_pred c----hHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhcc
Q 015729 155 N----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKT 224 (401)
Q Consensus 155 ~----l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~ 224 (401)
| +++|.++|++ +|+++|+|++|..... ..+.....+|++++| |.++++ .++|++++++++.+.+..
T Consensus 204 ~~~~~l~~l~~l~~~--~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~s--K~lg~gg~~ig~~~~~~~i~~~~~~ 279 (396)
T PRK04073 204 PPEGFLKAARELCKE--ENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILG--KALGGGVFPISCVAANRDILGVFTP 279 (396)
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEec--ccccCCCCcceEEEEcHHHHhhhcC
Confidence 6 7899999999 9999999999883221 123333457877764 988654 458999999998776643
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (401)
... + ..++.++..+++..++++.+.+++ ..++..++.+++.+.|++++........ .
T Consensus 280 ~~~----------------~--~t~~~~~~~~aaa~aaL~~~~~~~---l~~~~~~~~~~l~~~L~~l~~~~i~~~~--~ 336 (396)
T PRK04073 280 GSH----------------G--STFGGNPLACAVSIAALEVLEEEK---LPERSLELGEYFKEQLKEIDNPMIKEVR--G 336 (396)
T ss_pred CCC----------------C--CCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhcCCccccee--c
Confidence 210 1 122355666777778888776543 5567777899999999887433222111 2
Q ss_pred CceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
.+.++.+.++. +..++.+.|+++ ||.+.+. .++++||++...+|++|+++++++|++++
T Consensus 337 ~g~~~~~~~~~--~~~~~~~~l~~~-Gv~~~~~----~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 337 RGLFIGVELNE--PARPYCEALKEE-GLLCKET----HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ceEEEEEEecc--hHHHHHHHHHHC-CeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 34566777743 467889999876 9998643 24689999887889999999999998875
No 201
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.92 E-value=7e-23 Score=194.85 Aligned_cols=287 Identities=16% Similarity=0.124 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---CC----CCCeEEEEcCCcchHHHHHHHHHcCCcEE--
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---LS----PGDRIISFLIGQFSLLWIDQQQRLNFNVD-- 111 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---~~----~gd~vl~~~~~~~~~~~~~~~~~~g~~~~-- 111 (401)
.+...++++.+++++|.+ .+++++||++|+..++..+ .. ++|+|++++++|++..... ...+....
T Consensus 68 ~~~~~~l~~~la~~~g~~---~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~--~~~~~~~~~~ 142 (379)
T TIGR00707 68 TEPQEELAEKLVEHSGAD---RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGA--LSATGQPKYQ 142 (379)
T ss_pred CHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHH--HHhcCChhhh
Confidence 466889999999999875 3899999999999887643 22 3799999999877654221 11122111
Q ss_pred --EEeCCCCCCC----ChHHHHHHHhccCCCCceEEEEEecCCCccccc----chHHHHHHhhhcCCCcEEEEecccccC
Q 015729 112 --VVESDWGEGA----KLDVLASKLAADTAHTIKAICIVHNETATGVTN----NLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 112 --~v~~~~~~~~----d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~----~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
..+...+... |++++++.+++ ++++++++++++++|... ++++|.++|++ +++++|+|++|...
T Consensus 143 ~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~--~~~~~i~De~~~~~ 216 (379)
T TIGR00707 143 KGFEPLVPGFSYAPYNDIESLKKAIDD----ETAAVIVEPIQGEGGVNPASAEFLKALREICKD--KDALLIFDEVQTGI 216 (379)
T ss_pred ccCCCCCCCceeeCCCCHHHHHHHhhh----CeeEEEEEccccCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCC
Confidence 1111111111 79999998874 568999988888888653 37889999999 99999999998722
Q ss_pred cc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHH
Q 015729 182 AI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (401)
Q Consensus 182 ~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 256 (401)
.. .++......|+++ .+|.++++.++|+++.++++.+.+..... + ..++.+...+
T Consensus 217 ~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~~~~~~~~~~~~~----------------~--~~~~~~~~~~ 276 (379)
T TIGR00707 217 GRTGKFFAYEHYGIEPDIIT--LAKGLGGGVPIGATLAKEEVAEAFTPGDH----------------G--STFGGNPLAC 276 (379)
T ss_pred CccchhhhHHhcCCCCCEEE--EcccccCCcccEEEEEcHHHHhhhcCCCC----------------C--CCCCCCHHHH
Confidence 11 1111223456654 46999766678999999988777654211 1 1223566667
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEcc
Q 015729 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL 336 (401)
Q Consensus 257 ~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~ 336 (401)
+++.++++.+... ...++++++.+++++.|.+++....... ....+.++++.+++ +..++.+.|.++ ||.+.+
T Consensus 277 ~aa~aaL~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~g~~~~~~~~~--~~~~~~~~l~~~-Gv~v~~ 349 (379)
T TIGR00707 277 AAALAVLEVIEKE---RLLENVKEKGDYFKERLEELGKNYPNKE-VRGKGLMLGIELEA--PCKDIVKKALEK-GLLVNC 349 (379)
T ss_pred HHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhhCCCCc-cccCceEEEEEecC--cHHHHHHHHHHC-CcEEee
Confidence 7788888876542 4667778888888888877532221111 11234567777753 467888988876 999986
Q ss_pred CCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 337 GLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 337 g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+. .+++|++++...+++++++++++|+++
T Consensus 350 ~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 350 AG----PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred CC----CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 42 368999887778999999999999875
No 202
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=5.6e-23 Score=193.81 Aligned_cols=287 Identities=14% Similarity=0.103 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
....++++.+++++|.+. ++++++|+.|+..++. ++++||+|+++.+.|.+.. +...+...|++++.++..
T Consensus 47 p~~~~le~~la~l~g~~~---~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--- 119 (378)
T TIGR01329 47 PTRTALESLLAKLDKADR---AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT--- 119 (378)
T ss_pred hHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC---
Confidence 457899999999999843 6667778889987665 7899999999988877654 445567789999999864
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
|+++++++++ ++++++++++++||+|.+.|+++|.++|++ +|+++|+|++++.+..... ...++|++++|.
T Consensus 120 --d~~~le~~i~----~~tklv~le~psnptg~v~dl~~I~~la~~--~g~~vivD~a~~~~~~~~~-l~~g~Di~v~S~ 190 (378)
T TIGR01329 120 --DLDKVKAALG----PKTKLVLLESPTNPLQKIVDIRKISEMAHA--QNALVVVDNTMMSPLLCNP-LELGADIVYHSA 190 (378)
T ss_pred --CHHHHHHhcC----cCceEEEEECCCCCCCeeecHHHHHHHHHH--cCCEEEEECCCcccccCCh-hhcCCcEEEEec
Confidence 7999999987 367999999999999999999999999999 9999999999876543222 245899999999
Q ss_pred CCcccCCCc--ceEEEecHHH-HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 200 QKALSLPTG--MGIVCASPKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 200 ~K~l~g~~g--~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
+|+++|+.+ .|+++++++. .+++.... . ..|. ..+.. .+.+-...-..+..+.+
T Consensus 191 tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~-------------~-~~G~----~~~~~-----~a~l~~~~l~tl~~R~e 247 (378)
T TIGR01329 191 TKFLAGHSDVMAGVLAVKGEEIAKKVYFLQ-------------N-STGS----GLAPF-----DCWLLLRGIKTLAIRIE 247 (378)
T ss_pred ceeccCCccceeEEEEeCcHHHHHHHHHHH-------------H-hcCC----cCCHH-----HHHHHHccCCCHHHHHH
Confidence 999987766 6888886543 34443210 0 0121 22332 11211111123677888
Q ss_pred HHHHHHHHHHHHHHHc-CC-ccccC-------------CCccCCceeEEEEcCCCCC-HHHHHHHHHhhCCeEEccCCC-
Q 015729 277 RHRRLGKATRLAVEAW-GL-KNCTQ-------------KEEWFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLGLGLN- 339 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~-~~~~~-------------~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~~i~v~~g~~- 339 (401)
+..+++..+.+.|++. .+ ++..+ +. ...+.++.|.+ ++.+ +.++...| +.+++.++.|..
T Consensus 248 ~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~-~g~~~~~sf~~-~~~~~~~~~~~~L-~~~~i~~s~G~~~ 324 (378)
T TIGR01329 248 KQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQA-KGAGSVLSFET-GSVALSKRLVEAT-KLFSITVSFGSVN 324 (378)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhC-CCcceEEEEEE-CCHHHHHHHHHhC-cCcccccCCCCCC
Confidence 8889999999999864 22 11111 11 12456888998 5544 56788887 455777666632
Q ss_pred -----C-----------------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 340 -----K-----------------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 340 -----~-----------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+ ..++.+|||+.. ||.|.+++-|+.+|+..+
T Consensus 325 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 377 (378)
T TIGR01329 325 SLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVTAP 377 (378)
T ss_pred ceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhcc
Confidence 0 113579998654 788888888888887543
No 203
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.92 E-value=4e-24 Score=195.52 Aligned_cols=226 Identities=16% Similarity=0.185 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG- 118 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 118 (401)
+...+.++++.+++++|.+. .+++++|+|.|+..++.+++++||+|++..++|.+.. ......|++++.++.+.+
T Consensus 57 ~~g~i~~~~~~~A~~~ga~~--~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~--~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 57 PTGPIKEAQELAARAFGAKH--TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVI--NGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred CChHHHHHHHHHHHHhCCCC--EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHH--HHHHHCCCEEEEecCccCc
Confidence 34568899999999999865 2555899999999999999999999999999988875 335568999998876543
Q ss_pred -----CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC-----cceeccC
Q 015729 119 -----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC-----AIDFRMD 188 (401)
Q Consensus 119 -----~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~-----~~~~~~~ 188 (401)
+.+|++++++++++.+ ++++++++++ |++|.+.|+++|.++|++ +|+++|+|++|+.. ..+.+..
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~~--~~k~v~l~~p-~~~G~~~dl~~I~~~~~~--~g~~livDeA~~~~~~~~~~~~~~~~ 207 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEHP--DAKAAVITNP-TYYGICYNLRKIVEEAHH--RGLPVLVDEAHGAHFRFHPILPSSAA 207 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhCC--CceEEEEECC-CCCCEecCHHHHHHHHHh--cCCeEEEECcchhhhccCcccCcchh
Confidence 3689999999997532 5789999987 789999999999999999 99999999998752 2233444
Q ss_pred cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHH
Q 015729 189 EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE 268 (401)
Q Consensus 189 ~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~ 268 (401)
..++|+++.|.||+++++.+.|++.++++..... .+......+. ..+++...++++..+++.+..
T Consensus 208 ~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~----------~~~~~~~~~~-----ttsps~~~~asl~~a~~~~~~ 272 (294)
T cd00615 208 MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPD----------RVNEALNLHQ-----STSPSYLILASLDVARAMMAL 272 (294)
T ss_pred hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHH----------HHHHHHHHHC-----CCCcHHHHHHHHHHHHHHHHH
Confidence 5689999999999997767667777765521100 0111112222 335888889999999998876
Q ss_pred hcHHHHHHHHHHHHHHHHHHHH
Q 015729 269 EGLENVIERHRRLGKATRLAVE 290 (401)
Q Consensus 269 ~g~~~~~~~~~~~~~~l~~~L~ 290 (401)
.| ++..++..++.+++++.|+
T Consensus 273 ~g-~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 273 EG-KELVEELIELALYARQEIN 293 (294)
T ss_pred Hh-HHHHHHHHHHHHHHHHHHh
Confidence 66 4567888888888888875
No 204
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=9.4e-23 Score=194.33 Aligned_cols=288 Identities=16% Similarity=0.104 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc----CCCCC----eEEEEcCCcchHHHHHHHHHcCCcEEEE
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT----LSPGD----RIISFLIGQFSLLWIDQQQRLNFNVDVV 113 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~----~~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v 113 (401)
+...++.+++++..+. +.+++++||++|++.+++.. ..+|| +|++.+++||+...... ...+. ....
T Consensus 73 ~~~~~la~~l~~~~~~---~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~-~~~~~-~~~~ 147 (389)
T PRK01278 73 PEQERLAERLVENSFA---DKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATI-AAGGQ-EKYL 147 (389)
T ss_pred hHHHHHHHHHHhhCCC---CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHH-hccCC-hhhc
Confidence 4456788888887643 34999999999999988653 34565 89999999888763222 11121 1111
Q ss_pred ----eCCCCC----CCChHHHHHHHhccCCCCceEEEEEecCCCccccc----chHHHHHHhhhcCCCcEEEEecccccC
Q 015729 114 ----ESDWGE----GAKLDVLASKLAADTAHTIKAICIVHNETATGVTN----NLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 114 ----~~~~~~----~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~----~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
+...+. ..|++++++.+++ ++++|+++.+++++|... .+++|.++|++ +|+++|+|++|...
T Consensus 148 ~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~--~g~~lI~DEv~~g~ 221 (389)
T PRK01278 148 EGFGPLVPGFDQVPFGDIEALKAAITP----NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDE--NGLLLIFDEVQCGM 221 (389)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHhhCC----CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCC
Confidence 111111 1489999998863 679999999899999443 47889999999 99999999998732
Q ss_pred cc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHH
Q 015729 182 AI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (401)
Q Consensus 182 ~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 256 (401)
.. ..+.....+|+++ .+|.++++.++|+++++++..+.+.... ....++.++..+
T Consensus 222 g~~g~~~~~~~~~~~pdi~t--~sK~l~~G~~ig~~~~~~~~~~~~~~~~------------------~~~t~~~~~~~~ 281 (389)
T PRK01278 222 GRTGKLFAHEWAGVTPDIMA--VAKGIGGGFPLGACLATEEAAKGMTPGT------------------HGSTYGGNPLAM 281 (389)
T ss_pred CcCCcceeecccCCCCCEEE--EehhccCCcceEEEEEcHHHHhccCCCC------------------CCCCCCccHHHH
Confidence 11 1111223356654 5699976666899999998877664321 111334566677
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeE
Q 015729 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLS 333 (401)
Q Consensus 257 ~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~ 333 (401)
+++.++++.+.+. ...++.+++.+++++.|+++ ... +..... ..+.+++++++. +..++++.|.++ ||.
T Consensus 282 aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~--g~G~~~~i~~~~--~~~~~~~~l~~~-GV~ 353 (389)
T PRK01278 282 AVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVR--GKGLLLGLKCVV--PNRDLVQALRDE-GLL 353 (389)
T ss_pred HHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEe--cccEEEEEEEec--CHHHHHHHHHHC-CeE
Confidence 7788888877543 34556666777777777664 122 222111 234566666632 577899999887 999
Q ss_pred EccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 334 LGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 334 v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.++. .+++||++...++++++++++++|++++++
T Consensus 354 ~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 354 TVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 87662 468999887778999999999999998865
No 205
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.92 E-value=3e-23 Score=196.54 Aligned_cols=290 Identities=14% Similarity=0.102 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.+++++|.+. .++++||+.|+..++.+++++||+|+++.+.|.+.. +.......|+++..++.
T Consensus 60 ~pt~~~Le~~lA~l~G~~~---al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~--- 133 (386)
T PRK06767 60 NPTVKLFEERMAVLEGGEE---ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM--- 133 (386)
T ss_pred CcchHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC---
Confidence 3457899999999999754 567778889999988888999999999988766554 33344556776666653
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
.|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+....+. ..++|++++|
T Consensus 134 --~d~~~l~~~i~~----~tklV~lesp~NptG~v~dl~~I~~la~~--~g~~vivD~a~a~~~~~~pl-~~g~Div~~S 204 (386)
T PRK06767 134 --ETEADIENKIRP----NTKLIFVETPINPTMKLIDLKQVIRVAKR--NGLLVIVDNTFCSPYLQRPL-ELGCDAVVHS 204 (386)
T ss_pred --CCHHHHHHhhCc----CceEEEEeCCCCCCceecCHHHHHHHHHH--cCCEEEEECCCcccccCCch-hcCCcEEEec
Confidence 278999998874 56999999999999999999999999999 99999999998755433222 4578999999
Q ss_pred CCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.+|+++|+.. .|+++++++.+.++.... . ...|. ..+...++....+++ .+..+++
T Consensus 205 ~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~------------~-~~~g~----~~~~~~a~l~~~~L~-----tl~~r~~ 262 (386)
T PRK06767 205 ATKYIGGHGDVVAGVTICKTRALAEKIRPM------------R-KDIGG----IMAPFDAWLLLRGLK-----TLAVRMD 262 (386)
T ss_pred CcceecCCCCceeEEEEeChHHHHHHHHHH------------H-HHhCC----CCCHHHHHHHHcCCC-----cHHHHHH
Confidence 9999965432 489999988765543110 0 00121 233322222222221 2456778
Q ss_pred HHHHHHHHHHHHHHHc-CCcccc-CCCc------cCCceeEEEEcCCC-CCHHHHHHHHHhhCCeEEccCCC------C-
Q 015729 277 RHRRLGKATRLAVEAW-GLKNCT-QKEE------WFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSLGLGLN------K- 340 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~~~-~~~~------~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~i~v~~g~~------~- 340 (401)
+.+++++.+.+.|++. +++... ++.+ ...+.++.|.++.+ .+..++.+.|. .+++.+..|.. +
T Consensus 263 ~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~-~~~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 263 RHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLH-FITIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCC-ccEEecCCCCcCccccCCC
Confidence 8899999999999986 666322 1100 01345788888432 23556777774 34666655521 0
Q ss_pred ----------------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 341 ----------------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 341 ----------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
...+.+|||+.. ||.+.+++-|+.+|+.
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 013569998654 6778888888777754
No 206
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=6.3e-23 Score=194.57 Aligned_cols=214 Identities=20% Similarity=0.136 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....+++++++++.|.+. .++++||++|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++.
T Consensus 59 ~p~~~~Le~~lA~l~g~~~---~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~--- 132 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAG---GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL--- 132 (405)
T ss_pred ChHHHHHHHHHHHHhCCCc---eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC---
Confidence 3456789999999999754 466777899999999899999999999998877643 44556667888887764
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
.|++++++++++ +++++++++|+||+|.+.++++|.++|++ +|+++|+|++|+.+... ....+++|++++|
T Consensus 133 --~d~~~l~~~i~~----~tklV~l~~P~NPtG~v~dl~~I~~la~~--~gi~vIvD~a~a~~~~~-~pl~~gaDivv~S 203 (405)
T PRK08776 133 --TDPRSLADALAQ----SPKLVLIETPSNPLLRITDLRFVIEAAHK--VGALTVVDNTFLSPALQ-KPLEFGADLVLHS 203 (405)
T ss_pred --CCHHHHHHhcCc----CCeEEEEECCCCCCCccCCHHHHHHHHHH--cCCEEEEECCCcccccC-CcccccCCEEEec
Confidence 278999998864 56999999999999999999999999999 99999999999865432 2224689999999
Q ss_pred CCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++|+.+ .|+++.+ +++.+++... .. ..| .+.++..+......++ .++.++
T Consensus 204 ~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~-------------~~-~~g----~~~s~~~a~l~~~gl~-----tl~~r~ 260 (405)
T PRK08776 204 TTKYINGHSDVVGGAVVARDAELHQQLVWW-------------AN-ALG----LTGSPFDAFLTLRGLR-----TLDARL 260 (405)
T ss_pred CceeecCCCCceEEEEEeCCHHHHHHHHHH-------------HH-hcC----CCCCHHHHHHHHhhhC-----cHHHHH
Confidence 9999986654 3777664 5554444311 00 012 1244443333332222 356788
Q ss_pred HHHHHHHHHHHHHHHHc
Q 015729 276 ERHRRLGKATRLAVEAW 292 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~ 292 (401)
++..+++..+.+.|++.
T Consensus 261 ~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 261 RVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 89999999999999874
No 207
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.4e-22 Score=189.65 Aligned_cols=291 Identities=11% Similarity=0.098 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
......|+++|+++-|.+. .++++||+.|+..++.+++++||+|+++...|.+.. +...++..|+++.+++..
T Consensus 61 nPt~~~le~~la~LEg~~~---a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~-- 135 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGAG---CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL-- 135 (395)
T ss_pred ChhHHHHHHHHHHHhCCCe---EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC--
Confidence 4557789999999988765 677888999999999999999999999988776665 334567789999988743
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++.++.||+|.+.|+++|.++|+++++|+++++|++++.+.. ++..++|+|++++|
T Consensus 136 ---d~~~l~~~l~~----~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaDivv~S 207 (395)
T PRK08114 136 ---IGADIAKLIQP----NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGIDISIQA 207 (395)
T ss_pred ---CHHHHHHhcCC----CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCcEEEEc
Confidence 78899999974 56999999999999999999999999999433699999999998766 88888999999999
Q ss_pred CCCcccCCC--cceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPT--GMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~--g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.||+++|+. ++|+++.+++.++.+... ....|. ..++. .++..++-++ -+.-+++
T Consensus 208 ~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~--------------~~~~G~----~~~p~---~a~l~~rgl~--TL~lR~~ 264 (395)
T PRK08114 208 GTKYLVGHSDAMIGTAVANARCWEQLREN--------------SYLMGQ----MVDAD---TAYMTSRGLR--TLGVRLR 264 (395)
T ss_pred CcccccCCCcceeEEEEcCHHHHHHHHHH--------------HHhccC----CCCHH---HHHHHHcCCC--cHHHHHH
Confidence 999998875 568888888765544311 011132 34442 2222222111 1567888
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCceeEEEEcCCCCCHHHHHHHHHhhCC---eEEccCCC
Q 015729 277 RHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHINSSEIVRRAWQRYN---LSLGLGLN 339 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---i~v~~g~~ 339 (401)
+..+++..+.+.|++. .++ +..+ .+. ...+.++.|.+..+.+.++..+.+ ++.. +.+..|..
T Consensus 265 ~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~-~~l~l~~~a~SlGg~ 343 (395)
T PRK08114 265 QHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYL-DNFSLFSMAYSWGGF 343 (395)
T ss_pred HHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHH-HhCCcceeecccCCc
Confidence 9999999999999974 221 1111 000 124568889984321233333322 2222 23332211
Q ss_pred ---------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 ---------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 ---------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
...++.+|+|+.. ||.|.+++-|+.+|+.
T Consensus 344 ~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~ 393 (395)
T PRK08114 344 ESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFAR 393 (395)
T ss_pred cceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 0123679998654 6777788877777754
No 208
>PLN02397 aspartate transaminase
Probab=99.92 E-value=2.5e-22 Score=192.70 Aligned_cols=313 Identities=16% Similarity=0.101 Sum_probs=199.8
Q ss_pred HHHHHHHccC--cCCCCCccHHHHHHHHHHHHHHHhcCCC-----CceE--EecCChhHH--HHHHHhccCCCCCeEEEE
Q 015729 22 DQVIRAMNRN--NEDYRSPAVPALTKTLLEDIKKIFKTTS-----GTPF--LIPTTGTGA--WESALTNTLSPGDRIISF 90 (401)
Q Consensus 22 ~~v~~a~~~~--~~~~~~~~~~~~~~~l~~~la~~~g~~~-----~~~i--~~~~g~t~a--~~~~~~~~~~~gd~vl~~ 90 (401)
+.+.+++... ......|.......++|+.+++++.... ++.+ ..+.+++++ +...+...+.|||+|+++
T Consensus 69 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~ 148 (423)
T PLN02397 69 NVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIP 148 (423)
T ss_pred hHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEe
Confidence 4566663221 1112245556678899999999875432 1223 113333333 444445556799999999
Q ss_pred cCCcchHHHHHHHHHcCCcEEEEeC-CC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhh
Q 015729 91 LIGQFSLLWIDQQQRLNFNVDVVES-DW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDE 165 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~ 165 (401)
+|.|+.+. ..++..|++++.+++ +. +..+|++.+++.+.+.+ .+++++++++|+||||.+++. ++|.++|++
T Consensus 149 ~P~y~~y~--~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~-~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~ 225 (423)
T PLN02397 149 NPTWGNHH--NIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP-DGSFVLLHACAHNPTGVDPTPEQWEQISDLIKS 225 (423)
T ss_pred CCCchhHH--HHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 99776653 567888999999987 32 35789999988886432 356888889999999999974 557778888
Q ss_pred cCCCcEEEEecccccCcce--------e-ccCcc-cceEEEecCCCccc-CCCcceEEE--e-cHHHHHHhccCCCCccc
Q 015729 166 YRHPALFLVDGVSSICAID--------F-RMDEW-GIDVALTGSQKALS-LPTGMGIVC--A-SPKALEASKTAKSVRVF 231 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~--------~-~~~~~-~~di~~~s~~K~l~-g~~g~G~l~--~-~~~~~~~~~~~~~~~~~ 231 (401)
+|++||+|++|...... . ..... ...+++.|.+|.++ .+-++|+++ . +++....+...
T Consensus 226 --~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~------ 297 (423)
T PLN02397 226 --KNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQ------ 297 (423)
T ss_pred --CCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHH------
Confidence 99999999998744321 0 11111 13578889999995 344569984 3 45543332210
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH--H-H--hcHHHHHHHHHHHHHHHHHHHHHcC----CccccCCCc
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI--F-E--EGLENVIERHRRLGKATRLAVEAWG----LKNCTQKEE 302 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~--~-~--~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~ 302 (401)
....... ...+++.....++..+++.- . . ..+++.++++.++++.+.+.|+++| +++..+
T Consensus 298 ------~~~~~~~--~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p--- 366 (423)
T PLN02397 298 ------LKLIARP--MYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITK--- 366 (423)
T ss_pred ------HHHHHhc--ccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccC---
Confidence 0000001 01123333333333333211 1 1 1145678889999999999999886 554433
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
..+.++|+.+ + .++++.|++++||.+. .++ |+++.+ .+++++++++++|+++++
T Consensus 367 -~gg~fl~~~l----~-~~~~~~Ll~~~~V~v~------~~~--Ri~~~~-~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 367 -QIGMFSFTGL----N-KEQVDRMTKEYHIYMT------RDG--RISMAG-LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred -CceEEEecCC----C-HHHHHHHHHhCCEEEC------CCC--eEEEee-CCHHHHHHHHHHHHHHHh
Confidence 3456777666 2 4588899888899985 123 997754 799999999999999974
No 209
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.92 E-value=2.5e-23 Score=196.24 Aligned_cols=215 Identities=18% Similarity=0.145 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
..+...++++++++++|.+. .+++++|++|+..++.+++++||+|+++.+.|++.. +...+...|++++.++.+
T Consensus 38 ~~p~~~~le~~la~l~g~~~---a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 113 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEA---ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD- 113 (369)
T ss_pred CChhHHHHHHHHHHHHCCCC---EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-
Confidence 45678899999999998754 677889999999999999999999999998887765 334566789888888754
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+.. ......++|+++.
T Consensus 114 ----d~~~l~~~i~~----~~~~v~~e~~~np~g~~~dl~~i~~la~~--~g~~livD~t~~~~~~-~~~~~~g~Divv~ 182 (369)
T cd00614 114 ----DPEALEAAIKP----ETKLVYVESPTNPTLKVVDIEAIAELAHE--HGALLVVDNTFATPYL-QRPLELGADIVVH 182 (369)
T ss_pred ----CHHHHHHhcCC----CCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCcchhc-CChhhhCCcEEEe
Confidence 68999998864 56999999999999999999999999999 9999999999987643 2223457999999
Q ss_pred cCCCcccCCC--cceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPT--GMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~--g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.+|+++|+. ..|++++++ ++.+++.... .. +..+.+....+.+..+++ .+...
T Consensus 183 S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~------------~~------~g~~~~p~~a~~~l~~l~-----tl~~r 239 (369)
T cd00614 183 SATKYIGGHSDVIAGVVVGSGEALIQRLRFLR------------LA------LGTILSPFDAWLLLRGLK-----TLPLR 239 (369)
T ss_pred ccceeccCCCCceEEEEEeCcHHHHHHHHHHH------------Hh------hCCCCCHHHHHHHHcCCC-----CHHHH
Confidence 9999997543 258999887 6666554321 00 122344433222222222 34567
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 015729 275 IERHRRLGKATRLAVEAW 292 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~ 292 (401)
+++..++++++.+.|++.
T Consensus 240 ~~~~~~na~~la~~L~~~ 257 (369)
T cd00614 240 MERHSENALKVAEFLEKH 257 (369)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 888899999999999986
No 210
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.92 E-value=1e-22 Score=193.14 Aligned_cols=320 Identities=13% Similarity=0.083 Sum_probs=205.4
Q ss_pred cccccCCCcCChHHHHHHHccCcCCC-CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
.|+-+.-..+.++.+.+........+ +.........++++++++++|.+. ..++++|+.|+..++.+++++||+|+
T Consensus 32 i~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~---~~~~~sG~~Ai~~~l~~~l~~Gd~Vl 108 (398)
T PRK07504 32 LFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAED---ARATASGMAAVTAAILCQVKAGDHVV 108 (398)
T ss_pred eECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCe---eeEecCHHHHHHHHHHHHhCCCCEEE
Confidence 34444334445555554432211111 122224557899999999999876 34577899999888888899999999
Q ss_pred EEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc
Q 015729 89 SFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (401)
Q Consensus 89 ~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~ 166 (401)
++.+.|.+.. +...+...|++++.++ ..|++++++++++ ++++|++++|+||+|.+.|+++|.++|++
T Consensus 109 ~~~~~y~~~~~~~~~~~~~~G~~v~~vd-----~~d~e~l~~ai~~----~tklV~lesp~NptG~v~dl~~I~~la~~- 178 (398)
T PRK07504 109 AARALFGSCRYVVETLLPRYGIESTLVD-----GLDLDNWEKAVRP----NTKVFFLESPTNPTLEVIDIAAVAKIANQ- 178 (398)
T ss_pred EcCCchhHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcCc----CceEEEEECCCCCCcEecCHHHHHHHHHH-
Confidence 9998777654 3344567799888886 2589999998874 56999999999999999999999999999
Q ss_pred CCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCC-cc-eEEEecHHHHHH-hccCCCCccccchHHHHHHhhc
Q 015729 167 RHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPT-GM-GIVCASPKALEA-SKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~-g~-G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
+|+++|+|++++.+... .....++|++++|.+|+++|+. ++ |+++.+++.+.+ +.. ... ..
T Consensus 179 -~gi~lvvD~a~a~~~~~-~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~------------~~~--~~ 242 (398)
T PRK07504 179 -AGAKLVVDNVFATPLFQ-KPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD------------YFR--HT 242 (398)
T ss_pred -cCCEEEEECCccccccC-CchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH------------HHH--Hh
Confidence 99999999999866432 2335689999999999996532 24 577777765442 211 001 11
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCceeE
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVT 309 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~ 309 (401)
| ...+...++.+..+++. +..+.++..++++.+.+.|++. ++. +..+ .+. ...+.++
T Consensus 243 g----~~~s~~~A~~~l~~L~t-----l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~ 313 (398)
T PRK07504 243 G----PSLSPFNAWTLLKGLET-----LPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLV 313 (398)
T ss_pred C----CCCCHHHHHHHHhccch-----HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEE
Confidence 2 13444333333333332 4667778889999999999875 432 1111 110 0135688
Q ss_pred EEEcCCCC-CHHHHHHHHHhhCCeEEccCCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHH
Q 015729 310 AVIVPSHI-NSSEIVRRAWQRYNLSLGLGLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAG 365 (401)
Q Consensus 310 ~~~~~~~~-~~~~l~~~L~~~~~i~v~~g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~ 365 (401)
.|.+.++. .+.++.+.|. -+++.+..|.. ...++.+|||+.. ||.|.+++.
T Consensus 314 s~~~~~~~~~~~~~~~~l~-~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~d 388 (398)
T PRK07504 314 AFELKGGKEAAFRFLNALK-IVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGL----EDTDDLIED 388 (398)
T ss_pred EEEeCCCHHHHHHHHHhCC-cceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHH
Confidence 89984221 1223334332 22333322211 0123569998654 667777777
Q ss_pred HHHHHHh
Q 015729 366 VEMILKD 372 (401)
Q Consensus 366 i~~~l~~ 372 (401)
|+.+|+.
T Consensus 389 l~~al~~ 395 (398)
T PRK07504 389 LAAALKK 395 (398)
T ss_pred HHHHHHh
Confidence 7777754
No 211
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.92 E-value=1.1e-22 Score=193.19 Aligned_cols=294 Identities=14% Similarity=0.126 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......+|++++++++|.+. +++++||++|+..++.+++++||+|+++.+.|.+.. +...++..|++++.++..
T Consensus 62 ~~p~~~~Le~~iA~~~g~~~---~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~- 137 (400)
T PRK06234 62 GNPTSTEVENKLALLEGGEA---AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS- 137 (400)
T ss_pred CCccHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-
Confidence 34567899999999999753 788999999999988889999999999998776554 334567789999988754
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++|+||+|.+.|+++|.++|+++++|+++++|++++.+..... ...++|++++
T Consensus 138 ----d~e~l~~~i~~----~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~-l~~g~Divv~ 208 (400)
T PRK06234 138 ----NLEEVRNALKA----NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRP-LQLGADVVVH 208 (400)
T ss_pred ----CHHHHHHHhcc----CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCc-hhhCCcEEEe
Confidence 79999999874 56999999999999999999999999999433999999999987643322 2457899999
Q ss_pred cCCCcccCCC--cceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 198 GSQKALSLPT--GMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 198 s~~K~l~g~~--g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
|.+|+++++. ..|++++++++++++..... .. ..| .+.+...++.....++ .++.++
T Consensus 209 S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~-----------~~-~~g----~~l~p~~a~l~~~~l~-----tl~~r~ 267 (400)
T PRK06234 209 SATKYLNGHGDVIAGFVVGKEEFINQVKLFGI-----------KD-MTG----SVIGPFEAFLIIRGMK-----TLQIRM 267 (400)
T ss_pred eccccccCCCCceeEEEEecHHHHHHHHHHHH-----------HH-hcC----CCCCHHHHHHHHhccC-----cHHHHH
Confidence 9999996433 14999999987776542100 00 011 2344432222222222 245677
Q ss_pred HHHHHHHHHHHHHHHHc-CCc-c----ccCCCc--------cCCceeEEEEcCCCC-CHHHHHHHHHhhCCeEEccCCC-
Q 015729 276 ERHRRLGKATRLAVEAW-GLK-N----CTQKEE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGLN- 339 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~-~----~~~~~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~~i~v~~g~~- 339 (401)
++..++++.+.+.|++. .+. + +...+. ...+.++.|+++.+. ...++.+.|. -+++.+..|..
T Consensus 268 ~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~-~~~~~~s~G~~~ 346 (400)
T PRK06234 268 EKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVK-LATLAVSLGDAE 346 (400)
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCC-cceEeccCCCCC
Confidence 77888999999999864 221 1 111110 124568889985331 1234444442 23444433311
Q ss_pred -----C-----------------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 -----K-----------------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 -----~-----------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+ ..++.+|||+.. ||.+.+++.++.+|+.
T Consensus 347 sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 397 (400)
T PRK06234 347 TLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALDL 397 (400)
T ss_pred ceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHH
Confidence 0 123579998654 6777777777777764
No 212
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=2e-22 Score=189.36 Aligned_cols=288 Identities=11% Similarity=0.113 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-H-HHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-W-IDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~-~~~~~~~g~~~~~v~~~~~~ 119 (401)
....+++++++++.|.+. +++++||++|+..++.+++++||+|+++++.|++.. + .......|+++..++.+
T Consensus 50 Pt~~~lE~~lA~l~g~~~---~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~--- 123 (377)
T TIGR01324 50 LTHFALQDAMCELEGGAG---CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL--- 123 (377)
T ss_pred ccHHHHHHHHHHHhCCCc---EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC---
Confidence 456789999999999764 888999999999999999999999999998876654 2 23456678888877533
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
+.+++++++++ ++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++|+.|.. ....++|+|++++|.
T Consensus 124 --~~e~l~~~i~~----~tklV~lesp~Np~g~~~dl~~I~~la~~--~g~~livD~t~a~g~~-~~pl~~gaDivv~S~ 194 (377)
T TIGR01324 124 --IGEDIATLIQP----NTKVLFLEAPSSITFEIQDIPAIAKAARN--PGIVIMIDNTWAAGLL-FKPLEHGVDISIQAG 194 (377)
T ss_pred --CHHHHHHhcCC----CceEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCCccccc-cCccccCceEEEecC
Confidence 23788888864 67999999999999999999999999999 9999999999998765 334567899999999
Q ss_pred CCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHH
Q 015729 200 QKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (401)
Q Consensus 200 ~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 277 (401)
+|+++|..+ .|+++.+++.++++... ....|. +.++..+..+...++ . +..++++
T Consensus 195 tK~l~G~~d~~gG~v~~~~~~~~~l~~~--------------~~~~G~----~l~p~~a~~~~rgl~---t--l~~R~~~ 251 (377)
T TIGR01324 195 TKYLVGHSDIMIGTVVANARTWDQLREH--------------SYLMGQ----MVDADDAYTTLRGLR---T--LGVRLKQ 251 (377)
T ss_pred ceeccCCCCceEEEEEeCHHHHHHHHHH--------------HHHhCC----CCCHHHHHHHHhhhh---h--HHHHHHH
Confidence 999987654 48888988876655321 111132 345533333333333 2 3456788
Q ss_pred HHHHHHHHHHHHHHc-CC-ccccC----CCc--------cCCceeEEEEcCC-C-CCHHHHHHHHHhhCCeEEccCCC--
Q 015729 278 HRRLGKATRLAVEAW-GL-KNCTQ----KEE--------WFSDTVTAVIVPS-H-INSSEIVRRAWQRYNLSLGLGLN-- 339 (401)
Q Consensus 278 ~~~~~~~l~~~L~~~-g~-~~~~~----~~~--------~~~~~~~~~~~~~-~-~~~~~l~~~L~~~~~i~v~~g~~-- 339 (401)
.++++..+.+.|++. .+ ++..+ .+. ...+.++.|.+.+ + .....+.+.|. -+++.+..|..
T Consensus 252 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~-~~~~~~slG~~~s 330 (377)
T TIGR01324 252 HQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQ-LFGLGYSWGGYES 330 (377)
T ss_pred HHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCC-cceEeccCCCccc
Confidence 888888899999874 22 11111 110 1346788899842 1 12334555553 23444333311
Q ss_pred -----------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 -----------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 -----------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
...++.+|||+.. ||.|.+++-|+.+|+.
T Consensus 331 l~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 331 LALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred eeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 0123568998654 6777788777777754
No 213
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.92 E-value=1.2e-22 Score=192.17 Aligned_cols=289 Identities=13% Similarity=0.120 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++++++++|.+. .++++||+.|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++.+
T Consensus 58 ~p~~~~le~~lA~l~g~~~---av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~-- 132 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEGTEA---AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA-- 132 (391)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC--
Confidence 4567899999999999876 678888999999998888999999999988765443 345567789999988865
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+..... ...++|++++|
T Consensus 133 ---d~e~l~~~i~~----~tklV~le~p~Np~G~v~dl~~I~~la~~--~gi~livD~a~a~~~~~~~-~~~g~Divv~S 202 (391)
T TIGR01328 133 ---IPEEVKAHIKD----NTKIVYFETPANPTMKLIDMERVCRDAHS--QGVKVIVDNTFATPMLTNP-VALGVDVVVHS 202 (391)
T ss_pred ---CHHHHHHhhcc----CCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCCchhccCCc-hhcCCCEEEcc
Confidence 79999998874 56999999999999999999999999999 9999999999986643222 24579999999
Q ss_pred CCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.+|+++++.. .|+++.++++++++..... ..+ .| ...+...++ .++..++ .+..+++
T Consensus 203 ~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~-----------~~~-~g----~~l~~~~a~---l~l~~L~--tl~~r~~ 261 (391)
T TIGR01328 203 ATKYIGGHGDVVAGLICGKAELLQQIRMVGI-----------KDM-TG----SVISPFDAW---LILRGLK--TLNIRMK 261 (391)
T ss_pred ccccccCCCCceEEEEEcCHHHHHHHHHHHH-----------HhC-CC----CCCCcHHHH---HHHhCcC--cHHHHHH
Confidence 9999975432 4888888887776653110 000 01 123332222 2222121 2456788
Q ss_pred HHHHHHHHHHHHHHHc-CCcc-ccC----CCc--------cCCceeEEEEcCCCCCHHHHHHHHHhhCCe---EEccCCC
Q 015729 277 RHRRLGKATRLAVEAW-GLKN-CTQ----KEE--------WFSDTVTAVIVPSHINSSEIVRRAWQRYNL---SLGLGLN 339 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~-~~~----~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i---~v~~g~~ 339 (401)
+..++++.+.+.|++. ++.. ..+ .+. ...+.++.|.++ + +..+..+ +.++-.+ .+..|..
T Consensus 262 ~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~-~-~~~~~~~-f~~~l~~~~~~~s~G~~ 338 (391)
T TIGR01328 262 RHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK-G-GFAGAKK-LLNNLKLIRLAVSLGDA 338 (391)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC-C-CHHHHHH-HHHhCCcceEecCCCCC
Confidence 8899999999999875 4322 111 100 023568889984 2 2233222 2232232 2222211
Q ss_pred ------C-----------------CCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 ------K-----------------VAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 ------~-----------------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+ ...+.+|||+.. ||.|.+++-|+.+|+.
T Consensus 339 ~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 339 ETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred cccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 0 113569998644 7788888888887764
No 214
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=5.3e-23 Score=193.42 Aligned_cols=289 Identities=13% Similarity=0.059 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......++++.++++.|.+ .+++++|+++|+..++.+++++||+|+++.+.|.+.. +.......|++++.++.
T Consensus 51 ~npt~~~Le~~lA~leg~e---~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-- 125 (388)
T PRK08861 51 GNPNRGLLEQTLSELESGK---GAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-- 125 (388)
T ss_pred CCchHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC--
Confidence 3455779999999999964 3999999999999999999999999999998876544 33344556788887753
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
.|++++++++++ ++++|++++|+||||.+.|+++|.++|++ +|+++|+|++++.+..... .+.|+|++++
T Consensus 126 ---~d~e~l~~~i~~----~tklV~lesP~NPtG~v~dl~~I~~la~~--~gi~vIvDea~~~~~~~~p-l~~GaDivv~ 195 (388)
T PRK08861 126 ---SDAAALDAALAK----KPKLILLETPSNPLVRVVDIAELCQKAKA--VGALVAVDNTFLTPVLQKP-LELGADFVIH 195 (388)
T ss_pred ---CCHHHHHHhcCc----CCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCccccccCCC-cccCCCEEEe
Confidence 389999998874 56999999999999999999999999999 9999999999987643322 3468999999
Q ss_pred cCCCcccCCCc--ceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.||+++|+.+ .|++++++ ++.+++... .. ..| ...++.. +...++-++ -+.-+
T Consensus 196 S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~-------------~~-~~G----~~~~p~~---a~l~~rgl~--Tl~lR 252 (388)
T PRK08861 196 STTKYINGHSDVIGGVLITKTKEHAEELAWW-------------GN-CIG----ATGTPFD---SYMTLRGIR--TLGAR 252 (388)
T ss_pred ecceeccCCCcceeEEEEecHHHHHHHHHHH-------------Hh-ccC----CCCChHH---HHHHHhcCC--CHHHH
Confidence 99999987654 37777754 443333211 00 112 2344432 222222111 25678
Q ss_pred HHHHHHHHHHHHHHHHHc-CCc-cc----cCCCc--------cCCceeEEEEcCCCCCHHHHHHHHHhh---CCeEEccC
Q 015729 275 IERHRRLGKATRLAVEAW-GLK-NC----TQKEE--------WFSDTVTAVIVPSHINSSEIVRRAWQR---YNLSLGLG 337 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~-~~----~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~i~v~~g 337 (401)
+++..+++..+.+.|++. .+. +. ...+. ...+.++.|++. + +.++..+ +.++ +.+.+..|
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~-~-~~~~~~~-f~~~l~l~~~~~s~G 329 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA-G-SFEQLKV-FVKALALFSLAESLG 329 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC-C-CHHHHHH-HHhcCCcceEccCCC
Confidence 888999999999999874 221 11 11110 124568889984 3 3333322 2232 22233333
Q ss_pred CC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 338 LN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 338 ~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.. ...++.+|+|+.. ||+|.+++-|+.+++.+
T Consensus 330 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 330 GVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFAKA 384 (388)
T ss_pred CCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHH
Confidence 11 0123569998654 66677777777766543
No 215
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.92 E-value=2.4e-22 Score=190.29 Aligned_cols=289 Identities=15% Similarity=0.119 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......++++.+++++|.+. +++++||++|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++.+
T Consensus 59 ~~p~~~~le~~la~l~g~~~---~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 134 (390)
T PRK08133 59 TNPTVTMFQERLAALEGAEA---CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT- 134 (390)
T ss_pred CChHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-
Confidence 34567899999999999865 788999999999999888999999999988776654 344567789999999864
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+..... ...++|++++
T Consensus 135 ----d~~~l~~~i~~----~tklV~ie~p~NptG~v~dl~~I~~la~~--~gi~livD~t~~~~~~~~p-l~~g~Divv~ 203 (390)
T PRK08133 135 ----DLDAWRAAVRP----NTKLFFLETPSNPLTELADIAALAEIAHA--AGALLVVDNCFCTPALQQP-LKLGADVVIH 203 (390)
T ss_pred ----CHHHHHHhcCc----CCeEEEEECCCCCCCCcCCHHHHHHHHHH--cCCEEEEECCCcccccCCc-hhhCCcEEEe
Confidence 78999998874 56999999999999999999999999999 9999999999875543222 2457899999
Q ss_pred cCCCcccCCC-cc-eEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 198 GSQKALSLPT-GM-GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 198 s~~K~l~g~~-g~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
|.+|++++.. .+ |+++.+++.++++... .. ..| ...+.. .+..++..+. .+..+.
T Consensus 204 S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~------------~~--~~g----~~~~~~---~a~~~l~gl~--tl~~R~ 260 (390)
T PRK08133 204 SATKYLDGQGRVLGGAVVGSKELMEEVFGF------------LR--TAG----PTLSPF---NAWVFLKGLE--TLSLRM 260 (390)
T ss_pred ecceeecCCcceEeEEEEcCHHHHHHHHHH------------HH--HhC----CCCCHH---HHHHHHcccc--hHHHHH
Confidence 9999996432 23 7788887765544311 01 012 123332 2222222221 256677
Q ss_pred HHHHHHHHHHHHHHHHc-CCccc-cCC----C--------ccCCceeEEEEcCCCC-CHHHHHHHHHhhCCeEEccCCC-
Q 015729 276 ERHRRLGKATRLAVEAW-GLKNC-TQK----E--------EWFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGLN- 339 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~~~-~~~----~--------~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~~i~v~~g~~- 339 (401)
++..+++..+.+.|++. +++.. .+. + ....+.++.|++..+. ....+.+.|. -+.+.+..|..
T Consensus 261 ~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~-l~~~~~slG~~~ 339 (390)
T PRK08133 261 EAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATR-LISITANLGDTK 339 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCC-cceEeccCCCcc
Confidence 77888999999999875 43221 110 0 0124568889984221 1223333331 12222222210
Q ss_pred ------------C----------CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 340 ------------K----------VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 340 ------------~----------~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
. ...+.+|||+.. ||.|.+++-|+.+|+
T Consensus 340 sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 340 TTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred eeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 0 123579998654 677777777777664
No 216
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=1.2e-22 Score=191.73 Aligned_cols=289 Identities=16% Similarity=0.071 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....+++++++++.|.+ .+++++||++|+..++.+++++||+|+++++.|.+.. +.......++++..++
T Consensus 51 ~pt~~~L~~~lA~l~g~~---~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd---- 123 (386)
T PRK08045 51 NPTRDVVQRALAELEGGA---GAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD---- 123 (386)
T ss_pred CccHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC----
Confidence 455779999999999864 3889999999999999999999999999999877544 3444455566776664
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
..|++++++++++ ++++|++++|+||||.+.|+++|.++|++ +|+++++|+++..+... .....++|+++.|
T Consensus 124 -~~d~e~l~~~l~~----~tklV~l~sP~NPtG~v~di~~I~~ia~~--~g~~vivDeay~~~~~~-~pl~~gaDivv~S 195 (386)
T PRK08045 124 -QGDEQALRAALAE----KPKLVLVESPSNPLLRVVDIAKICHLARE--AGAVSVVDNTFLSPALQ-NPLALGADLVLHS 195 (386)
T ss_pred -CCCHHHHHHhccc----CCeEEEEECCCCCCCEecCHHHHHHHHHH--cCCEEEEECCCCccccC-CchhhCCCEEEee
Confidence 2489999998874 56999999999999999999999999999 99999999998876432 2235688999999
Q ss_pred CCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++|+.+ .|+++.+ +++.+++... ...+ | .+.++... ..++..+. -+..++
T Consensus 196 ~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~------------~~~~--g----~~~~p~~~---~l~~rgl~--tl~~R~ 252 (386)
T PRK08045 196 CTKYLNGHSDVVAGVVIAKDPDVVTELAWW------------ANNI--G----VTGGAFDS---YLLLRGLR--TLVPRM 252 (386)
T ss_pred cceeccCCCCceeEEEEeCcHHHHHHHHHH------------HHhc--C----CCCCHHHH---HHHHhhhc--cHHHHH
Confidence 9999987765 4777664 5554443211 0111 1 22444322 33333222 256788
Q ss_pred HHHHHHHHHHHHHHHHc-CCc-c----ccCCCc--------cCCceeEEEEcCCCCC-HHHHHHHHHhhCCeEEccCCC-
Q 015729 276 ERHRRLGKATRLAVEAW-GLK-N----CTQKEE--------WFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLGLGLN- 339 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~-~----~~~~~~--------~~~~~~~~~~~~~~~~-~~~l~~~L~~~~~i~v~~g~~- 339 (401)
++..+++..+.+.|++. .++ + ....+. ...+.++.|.++++.+ ..++.+.|. -+.+.+..|..
T Consensus 253 ~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-~~~~~~s~G~~~ 331 (386)
T PRK08045 253 ELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLS-LFTLAESLGGVE 331 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhcc-ceeEeccCCCCc
Confidence 89999999999999874 322 1 111100 1235688898843211 223444432 22223222211
Q ss_pred ----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 ----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 ----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
...++.+|+|+.. ||.|.+++-|+++|+.
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 382 (386)
T PRK08045 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFRA 382 (386)
T ss_pred eeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 0123579998654 6677777777777654
No 217
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.92 E-value=3.6e-22 Score=188.91 Aligned_cols=307 Identities=12% Similarity=0.142 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
....+++++.+++++|.+. +++++||++|+..++.++ +++||+|+++.+.|++.. ..+...|++++.+++++++
T Consensus 30 ~~~~~~~e~~la~~~g~~~---~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~--~~~~~~G~~~v~~d~d~~~ 104 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSAK---VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA--NAFVLRGAKIVFVDIRPDT 104 (375)
T ss_pred CHHHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHH--HHHHHcCCEEEEEecCCCc
Confidence 4567788899999998853 899999999998877654 789999999999877664 4567789999999998764
Q ss_pred -CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCccc--ceEEE
Q 015729 120 -GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWG--IDVAL 196 (401)
Q Consensus 120 -~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~di~~ 196 (401)
.+|++++++++++ ++++|++++ ++|...++++|.++|++ +|++||+|++|+.|.. .+....+ .|+-+
T Consensus 105 ~~~d~~~le~~i~~----~tk~i~~~~---~~G~~~~~~~i~~la~~--~~i~vIeD~a~a~g~~-~~~~~~g~~~~~~~ 174 (375)
T PRK11706 105 MNIDETLIEAAITP----KTRAIVPVH---YAGVACEMDTIMALAKK--HNLFVVEDAAQGVMST-YKGRALGTIGHIGC 174 (375)
T ss_pred CCcCHHHHHHhcCC----CCeEEEEeC---CCCCccCHHHHHHHHHH--cCCEEEEECccccccc-cCCeeeecCcCEEE
Confidence 7899999999874 568888764 68999999999999999 9999999999998863 1211111 36666
Q ss_pred ecCC--CcccCCCcceEEEecHHHHHHhccCCCCccccc--hHHHHHH---hhcCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 015729 197 TGSQ--KALSLPTGMGIVCASPKALEASKTAKSVRVFFD--WKDYIKF---YNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (401)
Q Consensus 197 ~s~~--K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~g~~~~~~~~~~~~~a~~~al~~~~~~ 269 (401)
+|.| |.+.++.|.++++.++++.+++...+..+...+ +...... ...|. +.... .+.+++...+-.
T Consensus 175 ~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~----~~~~~---~~~aa~~~~ql~ 247 (375)
T PRK11706 175 FSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGS----SYLPS---ELQAAYLWAQLE 247 (375)
T ss_pred EeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeeccc----ccCcC---HHHHHHHHHHHH
Confidence 6765 999655554555556777665543321110000 0000000 00111 11111 123333332223
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHcC----Ccccc-CCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---
Q 015729 270 GLENVIERHRRLGKATRLAVEAWG----LKNCT-QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--- 341 (401)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~--- 341 (401)
.+++..++.+++.+.+.+.|.++. +.+.. +......+.++++.++++.+..++.+.|.++ ||.++..+.+.
T Consensus 248 ~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-gI~~~~~~~p~~~~ 326 (375)
T PRK11706 248 AADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEA-GIMAVFHYIPLHSS 326 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHC-CCCccccCCccCcc
Confidence 356778888888888888887652 22221 1111223445667676556788999999876 98865432110
Q ss_pred -------------------CCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 342 -------------------AGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 342 -------------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
..+.+.+.++...+++|++..++.|++.+
T Consensus 327 ~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 327 PAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred hhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 11337887777889999999999998764
No 218
>PRK05968 hypothetical protein; Provisional
Probab=99.92 E-value=1.6e-22 Score=191.55 Aligned_cols=288 Identities=15% Similarity=0.129 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++++++++|.+. .+++++|+.|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++.+
T Consensus 62 ~p~~~~le~~lA~l~g~~~---av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 136 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAED---ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR-- 136 (389)
T ss_pred ChhHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC--
Confidence 4558899999999999875 455678889999888888999999999998877654 445677789999988744
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++. ++++|++++|.|+++.+.|+++|.++|++ +|+++|+|++++.+.... ....++|++++|
T Consensus 137 ---d~~~l~~~i~-----~tklV~ie~pt~~~~~~~dl~~i~~la~~--~gi~vivD~a~a~~~~~~-p~~~g~Divv~S 205 (389)
T PRK05968 137 ---DEEAVAKALP-----GAKLLYLESPTSWVFELQDVAALAALAKR--HGVVTMIDNSWASPVFQR-PITLGVDLVIHS 205 (389)
T ss_pred ---CHHHHHHhcc-----cCCEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCCcchhccC-chhcCCcEEEee
Confidence 7899998873 46899999999999999999999999999 999999999987664322 234678999999
Q ss_pred CCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.+|+++|+.+ .|+++.+++.++++.... ..+ .| ...+....+.+..+++ .+..+.+
T Consensus 206 ~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~------------~~~-~g----~~~~~~~A~~~l~~L~-----tl~~r~~ 263 (389)
T PRK05968 206 ASKYLGGHSDTVAGVVAGSKEHIARINAEA------------YPY-LG----AKLSPFEAWLLLRGLR-----TLPLRMK 263 (389)
T ss_pred ccccccCCCCeEEEEEEECHHHHHHHHHHH------------HHh-CC----CCCChHHHHHHHcccC-----cHHHHHH
Confidence 9999987643 588888988876665310 000 11 1233332222222222 3567888
Q ss_pred HHHHHHHHHHHHHHHc-CCcccc-CC-Cc------cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC------
Q 015729 277 RHRRLGKATRLAVEAW-GLKNCT-QK-EE------WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV------ 341 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~~~-~~-~~------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~------ 341 (401)
+..++++.+.+.|++. ++.... +. .+ ...+.++.|.++++.+..++.+.|. .+++.++.|....
T Consensus 264 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~-~~~~~~s~G~~~slv~p~~ 342 (389)
T PRK05968 264 AHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALK-LFRLGVSWGGHESLVVPAE 342 (389)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCC-ccEEecCCCCCCceeeeCc
Confidence 8888899999999986 554332 21 00 0224488888854455667777775 3466655552211
Q ss_pred -----------------CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 342 -----------------AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 342 -----------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.++.+|+|+.. |+.+.+++-++.+|+
T Consensus 343 ~~~~~~~~~~~~~~~gi~~~liR~SvGl----E~~~dl~~dl~~al~ 385 (389)
T PRK05968 343 VVLQQKAQPNSAARFGVSPRSVRLHVGL----EGTEALWADLEQALA 385 (389)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence 13579998766 455555555555554
No 219
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=4.6e-22 Score=177.49 Aligned_cols=351 Identities=17% Similarity=0.162 Sum_probs=246.9
Q ss_pred cccccCCCcCChHHHHHHHccCcCC--------CCCcc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNED--------YRSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~--------~~~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~ 77 (401)
...+++.=-..+++|++++.....+ .+.|+ .+....-+.++..++||.+... +-..||++|+.++.
T Consensus 28 ~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~an--VQPhSGs~AN~av~ 105 (413)
T COG0112 28 HIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYAN--VQPHSGSQANQAVY 105 (413)
T ss_pred ceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccc--cCCCCchHHHHHHH
Confidence 3445555556788999988874322 12222 3444556778889999998653 44678899999999
Q ss_pred hccCCCCCeEEEEcCCcchHH-HHHHHHHcC--CcEEEEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLL-WIDQQQRLN--FNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g--~~~~~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~ 153 (401)
.++++|||+|+-.+..+-++. -..-....| .+.+..+++.+ ..+|.|++++.+.+ .|||+|+.-..- .-..
T Consensus 106 ~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e---~kPK~ii~G~Sa--Y~r~ 180 (413)
T COG0112 106 LALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKE---VKPKLIIAGGSA--YSRP 180 (413)
T ss_pred HHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHH---hCCCEEEECccc--cccc
Confidence 999999999998877444332 010111123 35566666744 68999999999987 688988876433 3367
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecH-HHHHHhccCCC
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAKS 227 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~ 227 (401)
.|.+++.++|++ .|.++.+|.||..|.. +-++. .+|++++|.||+|.||.| |++.+++ ++.+++.....
T Consensus 181 id~~~~reIad~--VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVF 255 (413)
T COG0112 181 IDFKRFREIADE--VGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVF 255 (413)
T ss_pred cCHHHHHHHHHH--hCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcC
Confidence 899999999999 9999999999976532 22222 489999999999998887 8888886 76666654322
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCce
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (401)
+.. -++|..+.+++..-|+....+.+++...++..+|++.|.+.|.+.|+++.+.. ..+.
T Consensus 256 Pg~-----------------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGg---TdnH 315 (413)
T COG0112 256 PGL-----------------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGG---TDNH 315 (413)
T ss_pred Ccc-----------------CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCC---ccce
Confidence 211 22466677777777777777778899999999999999999999999998732 3344
Q ss_pred eEEEEcC-CCCCHHHHHHHHHhhCCeEEccCCCCC------CCcEEEEeecccC----CHHHHHHHHHHHHHHHHhcCCC
Q 015729 308 VTAVIVP-SHINSSEIVRRAWQRYNLSLGLGLNKV------AGKVFRIGHLGHL----NELQLLGCLAGVEMILKDVGYP 376 (401)
Q Consensus 308 ~~~~~~~-~~~~~~~l~~~L~~~~~i~v~~g~~~~------~~~~~Ri~~~~~~----~~~di~~~~~~i~~~l~~~~~~ 376 (401)
++.+.+. .+++..+....|. +.||.+....-+. ....+||++..-+ .++|++++.+.|.++++...
T Consensus 316 l~lVDl~~~~~~Gk~ae~~L~-~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~-- 392 (413)
T COG0112 316 LVLVDLRSKGLTGKKAEAALE-RAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK-- 392 (413)
T ss_pred EEEEEcccCCCCHHHHHHHHH-HcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc--
Confidence 5556653 4567777767664 5599987553222 2334999986633 37899999999999998655
Q ss_pred CCcchHHHHHHHHHHccCCC
Q 015729 377 VKLGSGVAAASAYLQNNIPM 396 (401)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~ 396 (401)
.+.+.+...-.-|.++-|+
T Consensus 393 -~~~~~vk~~V~~l~~~fp~ 411 (413)
T COG0112 393 -DVPAEVKEEVAELCRRFPL 411 (413)
T ss_pred -hhHHHHHHHHHHHHHhCCC
Confidence 3333455555555555554
No 220
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.92 E-value=9.7e-23 Score=193.96 Aligned_cols=309 Identities=16% Similarity=0.150 Sum_probs=225.7
Q ss_pred CcccccCCCcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--- 80 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--- 80 (401)
..+....+++.+++.+.+++...... ...+......+++-..+++++|.+....-.+|.|||+|+..++.+.
T Consensus 63 ~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~ 142 (460)
T COG0076 63 RANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARER 142 (460)
T ss_pred ceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHH
Confidence 45677778888888887777764322 2344566778889999999999975555799999999998766331
Q ss_pred -C----C-C-----CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 81 -L----S-P-----GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 81 -~----~-~-----gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
. . . ..+|+++...|+|. .+.++..|++.+.++... +.++|++++++++++++... +|+.+.+++
T Consensus 143 ~~~~~~~~~~~~~~~P~ii~s~~aH~s~--~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g--~vV~~aGtT 218 (460)
T COG0076 143 WRKRALAESGKPGGKPNIVCSETAHFSF--EKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG--VVVGTAGTT 218 (460)
T ss_pred HHHHhhhcccccCCCCeEEecCcchhHH--HHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCc--eEEEEecCC
Confidence 1 0 0 12688888888876 478899999999999988 68999999999999876322 488888999
Q ss_pred CcccccchHHHHHHhhhcCCCcEEEEecccccCccee-------ccCcccceEEEecCCCcccCCCcceEEEecHH-HHH
Q 015729 149 ATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-------RMDEWGIDVALTGSQKALSLPTGMGIVCASPK-ALE 220 (401)
Q Consensus 149 ~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-------~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~-~~~ 220 (401)
++|.+.|+++|.++|++ +++|+|+|+|.+.+.++| ++.-.++|.++.++||++..|.|+|+++.+++ .+.
T Consensus 219 ~~G~iDdi~~ia~ia~~--~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~ 296 (460)
T COG0076 219 DTGSIDDIEELADIAEE--YGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALR 296 (460)
T ss_pred CCCccCCHHHHHHHHHH--cCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhh
Confidence 99999999999999999 999999999988776644 33344799999999999999999999999887 444
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC-CccccC
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG-LKNCTQ 299 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~ 299 (401)
+............ ..... ...++.+...++++.+.+..+..+|+.++.++..++++++.+.|++.| +++...
T Consensus 297 ~~~~~~~~yl~~~--~~~~~-----ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~ 369 (460)
T COG0076 297 RILIFADYYLPGG--GIPNF-----TILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNE 369 (460)
T ss_pred hhhhcccccCCCC--CcCce-----eEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecC
Confidence 4433222111100 00000 111234444677888888888888999999999999999999999985 888763
Q ss_pred CCccCCceeEEEEcCCCCC-HHHHHHHHHhhCCeEEc
Q 015729 300 KEEWFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLG 335 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~~i~v~ 335 (401)
. .. .+++|+.|+..+ ..+...++... |..+.
T Consensus 370 p---~l-~~V~fr~~~~~~~~~~~~~~~~~~-gw~v~ 401 (460)
T COG0076 370 P---EL-PIVAFRLKDDEDTLADLSERLDRR-GWQVP 401 (460)
T ss_pred C---cc-ceEEEEcCCcccchhchHHHHHhc-Cceee
Confidence 2 23 477788855433 34455555433 55443
No 221
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.92 E-value=8e-22 Score=198.64 Aligned_cols=351 Identities=11% Similarity=-0.007 Sum_probs=231.9
Q ss_pred cccccCCCcCChHHHHHHHccC---cCCC-CCcc-----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH---
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRN---NEDY-RSPA-----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL--- 77 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~---~~~~-~~~~-----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~--- 77 (401)
.+-.+.+.-.+++.+-+..... ...| ..+. ..+.+.++++.++++.|.+.. -+..++|+.|....+
T Consensus 489 fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~--Sl~p~aGA~gE~agL~ai 566 (939)
T TIGR00461 489 MIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDAI--SLQPNSGAQGEYAGLRVI 566 (939)
T ss_pred CCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCc--ccCCchHHHHHHHHHHHH
Confidence 3444455666666555442221 1212 2333 557788999999999999962 355666776554333
Q ss_pred hccC-----CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 78 TNTL-----SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 78 ~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+... ...++|+++...|.++- ..++..|++++.|+++.++.+|+++|++++++.. .++++|++++++| +|.
T Consensus 567 R~y~~~rge~~R~~vlip~saHgtnP--asa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~-~~taaV~iT~pst-~G~ 642 (939)
T TIGR00461 567 RSYHESRGENHRNICLIPVSAHGTNP--ASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHG-DELAAVMVTYPST-HGV 642 (939)
T ss_pred HHHHHhcCCCCCCEEEEEccccCcCH--HHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcC-CceEEEEEEeCCc-Cce
Confidence 2211 12357888888775553 4477889999999999889999999999997522 3689999999998 788
Q ss_pred ccc-hHHHHHHhhhcCCCcEEEEecccccC-cceeccCcccceEEEecCCCccc-----CCCcceEEEecHHHHHHhccC
Q 015729 153 TNN-LSKVRKLLDEYRHPALFLVDGVSSIC-AIDFRMDEWGIDVALTGSQKALS-----LPTGMGIVCASPKALEASKTA 225 (401)
Q Consensus 153 ~~~-l~~i~~l~~~~~~~~~li~D~a~~~~-~~~~~~~~~~~di~~~s~~K~l~-----g~~g~G~l~~~~~~~~~~~~~ 225 (401)
+.+ +++|.++|++ +|.++++|+++..+ ....+..++|+|++.+|.||+|+ |++|+|++++++.+...+...
T Consensus 643 ~e~~I~eI~~iah~--~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~ 720 (939)
T TIGR00461 643 FEPTIQHACDIVHS--FGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKH 720 (939)
T ss_pred ecccHHHHHHHHHH--cCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCC
Confidence 877 9999999999 99999999998653 33334567899999999999998 667789999998765555433
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (401)
..... .+.......+. ......+.+...+...+.-+..+-.+|+++..+....++.|+++.|.+ ++++..+......
T Consensus 721 ~v~~t-~d~~greq~Ig-a~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~ 797 (939)
T TIGR00461 721 DVVSM-ITGIGGSKSIG-SVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHV 797 (939)
T ss_pred ccccc-ccCCCCccccc-cccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCce
Confidence 21110 00000000000 000011233333445566666677778999999999999999999987 5665543211011
Q ss_pred ceeEEEEcCC-----CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 306 DTVTAVIVPS-----HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 306 ~~~~~~~~~~-----~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..-+.+.++. +.+..++.++|.+. |+......++..+ .+=|.+....+++|+|++++++.++.+++
T Consensus 798 ~hEfv~~~~~~~~~~g~~~~dIakrL~d~-G~hapt~~~pv~g-~lmiepTE~eskeelD~f~~al~~I~~e~ 868 (939)
T TIGR00461 798 AHECILDLRPLKAKTGIEAIDVAKRLQDY-GFHAPTLSFPVPG-TLMVEPTESESLEELDRFCDAMIAIKEEI 868 (939)
T ss_pred eEEEEEeccchhhhcCCCHHHHHHHHHhC-CeeccccCCccCC-eEEEEeeccCCHHHHHHHHHHHHHHHHHH
Confidence 1224455531 46788999999876 8764332223334 54454445678999999999998876655
No 222
>PRK08354 putative aminotransferase; Provisional
Probab=99.92 E-value=1.2e-21 Score=180.95 Aligned_cols=283 Identities=12% Similarity=0.012 Sum_probs=176.7
Q ss_pred hHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHH
Q 015729 21 PDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWI 100 (401)
Q Consensus 21 ~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~ 100 (401)
++.+.+++.+.......+. ....+++.+++++|. ++++|+|+++|+..++. .+.+||+|++++|+|+.+.
T Consensus 22 p~~~~~a~~~~~~~~~~yp---~~~~l~~~ia~~~~~----~I~vt~G~~~al~~~~~-~~~~gd~vlv~~P~y~~~~-- 91 (311)
T PRK08354 22 PEWLDEMFERAKEISGRYT---YYEWLEEEFSKLFGE----PIVITAGITEALYLIGI-LALRDRKVIIPRHTYGEYE-- 91 (311)
T ss_pred CHHHHHHHHHHHHHhhcCC---ChHHHHHHHHHHHCC----CEEECCCHHHHHHHHHH-hhCCCCeEEEeCCCcHHHH--
Confidence 4566777765322111111 145789999999973 39999999999988764 4458999999999877654
Q ss_pred HHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchH---HHHHHhhhcCCCcEEEEecc
Q 015729 101 DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS---KVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 101 ~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~---~i~~l~~~~~~~~~li~D~a 177 (401)
..++..|++++.++ +|++.+++.++ +++.+++++|+||||.+++.+ +|.++|++ +|+++|+|++
T Consensus 92 ~~~~~~g~~~~~~~------~d~~~l~~~~~-----~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~--~~~~li~De~ 158 (311)
T PRK08354 92 RVARFFAARIIKGP------NDPEKLEELVE-----RNSVVFFCNPNNPDGKFYNFKELKPLLDAVED--RNALLILDEA 158 (311)
T ss_pred HHHHHcCCEEeecC------CCHHHHHHhhc-----CCCEEEEecCCCCCCCccCHHHHHHHHHHhhh--cCcEEEEeCc
Confidence 56788899887653 57889988775 347899999999999999855 56666777 9999999999
Q ss_pred cccCcceeccCcccceEEEecCCCccc-CCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHH
Q 015729 178 SSICAIDFRMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (401)
Q Consensus 178 ~~~~~~~~~~~~~~~di~~~s~~K~l~-g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 256 (401)
+......-........+++.|.+|.++ .+.++|++++-. +.+..... .++.+....
T Consensus 159 y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~~~---~~l~~~~~--------------------~~~~~~~~~ 215 (311)
T PRK08354 159 FIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKGFE---EAFRSVRM--------------------PWSIGSTGY 215 (311)
T ss_pred chhccccccccCCCcEEEEeccHhhcCCccceeeeeeehH---HHHHHcCC--------------------CccCCHHHH
Confidence 865432111111345688899999995 334569998832 33332110 111222222
Q ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEc
Q 015729 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG 335 (401)
Q Consensus 257 ~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~ 335 (401)
+++.+. .+.+.+ +..++.+.+++..+.+ +.....+ ..+ ++++.++ +..++.+.|.++ ||.+.
T Consensus 216 ~~~~~~----~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~----~~~-~~~~~~~---~~~~~~~~l~~~-gv~v~ 278 (311)
T PRK08354 216 AFLEFL----IEDDFE----HLRKTMPLIWREKERFEKALYVKS----DAN-FFIKDVG---DAEKFVEFLKRN-GILVR 278 (311)
T ss_pred HHHHHH----HHhHHH----HHHHHHHHHHHHHHHHHHhcCCCC----CCc-EEEEECC---CHHHHHHHHHHC-CeEEE
Confidence 222222 222222 2222233333333322 1111111 233 3435553 467888888765 99999
Q ss_pred cCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 336 LGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 336 ~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
+|.....++++||++. +.++.++++++++++
T Consensus 279 ~g~~f~~~~~iRi~~~---~~~~~~~l~~al~~~ 309 (311)
T PRK08354 279 DCTSFGLPGYIRFSVR---DREENEKLIRALREW 309 (311)
T ss_pred ecccCCCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 9965444689999765 456677777777664
No 223
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.9e-22 Score=190.95 Aligned_cols=286 Identities=13% Similarity=0.092 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......+++++++++.|.+. .+++++|+.|+..++. ++++||+|+++.+.|.+.. +...++..|++++.++.+
T Consensus 52 ~~p~~~~le~~lA~l~g~~~---~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~- 126 (390)
T PRK08064 52 GNPTREALEDIIAELEGGTK---GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT- 126 (390)
T ss_pred CChhHHHHHHHHHHHhCCCC---eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC-
Confidence 34668899999999999874 3556777889988775 7899999999999877654 456677889999999864
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++.+++ ++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+..... .+.++|+++.
T Consensus 127 ----d~~~l~~~l~~----~tklV~l~~p~NptG~~~dl~~I~~la~~--~g~~vvvD~a~~~~~~~~~-~~~g~Divv~ 195 (390)
T PRK08064 127 ----NLEEVAQNIKP----NTKLFYVETPSNPLLKVTDIRGVVKLAKA--IGCLTFVDNTFLTPLLQKP-LDLGADVVLH 195 (390)
T ss_pred ----CHHHHHHhcCC----CceEEEEECCCCCCcEeccHHHHHHHHHH--cCCEEEEECCCCcccccCc-hhhCCcEEEe
Confidence 78999988874 56999999999999999999999999999 9999999999876543222 2467999999
Q ss_pred cCCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.||+++|+.+ .|+++++ +++.+++..... . +....++..+. .++.-+. .+..+
T Consensus 196 S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~----------------~--~g~~~~~~~a~---l~~~gl~--tl~~R 252 (390)
T PRK08064 196 SATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN----------------S--FGAVLGVQDCW---LVLRGLK--TLHVR 252 (390)
T ss_pred ecceeccCCccceeEEEEeCCHHHHHHHHHHHH----------------h--cCCCCCHHHHH---HHHcccC--cHHHH
Confidence 99999987776 3877776 456555543210 1 01122222111 1222111 25577
Q ss_pred HHHHHHHHHHHHHHHHHc-CC-ccccC----CC--------ccCCceeEEEEcCCCCCHHHHHHHHHhhCCe---EEccC
Q 015729 275 IERHRRLGKATRLAVEAW-GL-KNCTQ----KE--------EWFSDTVTAVIVPSHINSSEIVRRAWQRYNL---SLGLG 337 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~-~~~~~----~~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i---~v~~g 337 (401)
.++..+++..+.+.|++. .+ ++..+ .+ ....+.++.|.+ ++ .+++.+.+ ++.++ .++.|
T Consensus 253 ~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~-~~--~~~~~~f~-~~l~l~~~~~s~G 328 (390)
T PRK08064 253 LEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTL-QS--EEAVRQFV-SHVKLPVFAVSLG 328 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEE-CC--HHHHHHHH-HhCCcceEcccCC
Confidence 888888888899998864 21 11111 00 012345888988 33 33444333 44455 44444
Q ss_pred C------------CC-----------CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 338 L------------NK-----------VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 338 ~------------~~-----------~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
. ++ ..++.+|+|+.-...++.++.+.+++++
T Consensus 329 ~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 329 AVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred CCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 1 00 1245799987764444445554444443
No 224
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.4e-22 Score=181.98 Aligned_cols=326 Identities=17% Similarity=0.163 Sum_probs=235.6
Q ss_pred CCCCCcccccCCC------cCChHHHHHHHccCcCC--CCCc-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHH
Q 015729 5 YAPGKNHLFVPGP------VHIPDQVIRAMNRNNED--YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (401)
Q Consensus 5 ~~~~~~~~~~~~p------~~~~~~v~~a~~~~~~~--~~~~-~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~ 75 (401)
+.-++-|++..+. ...+|+++++++++... |.+. ...+...++.+.|.+..+ . .+.++|++||++|++.
T Consensus 38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~-~d~vff~NSGaEA~Ea 115 (404)
T COG4992 38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-F-ADRVFFCNSGAEANEA 115 (404)
T ss_pred CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-c-ccEEEEcCCcHHHHHH
Confidence 4556777775432 56678999999886543 2222 234566788888888876 3 3449999999999999
Q ss_pred HHhc--cCC--C-CCeEEEEcCCcchHHHHHHHH--------HcC---CcEEEEeCCCCCCCChHHHHHHHhccCCCCce
Q 015729 76 ALTN--TLS--P-GDRIISFLIGQFSLLWIDQQQ--------RLN---FNVDVVESDWGEGAKLDVLASKLAADTAHTIK 139 (401)
Q Consensus 76 ~~~~--~~~--~-gd~vl~~~~~~~~~~~~~~~~--------~~g---~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~ 139 (401)
++.. ... + ..+|+...+++|+..+..+.- .++ -.++.+|.+ |++++++++++ ++.
T Consensus 116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~----~ta 186 (404)
T COG4992 116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDE----DTA 186 (404)
T ss_pred HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhcc----CeE
Confidence 9833 222 2 347888888888765322111 111 022333333 89999999996 569
Q ss_pred EEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcce
Q 015729 140 AICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMG 210 (401)
Q Consensus 140 ~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G 210 (401)
+|++..++...|++.+ ++++.++|++ +|+++|.|+.|..... .+......+||++.. |.++|+.++|
T Consensus 187 AvivEPIQGEgGV~~~~~~fl~~lr~lCd~--~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG~Pig 262 (404)
T COG4992 187 AVIVEPIQGEGGVIPAPPEFLKALRELCDE--HGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLA--KALGGGFPIG 262 (404)
T ss_pred EEEEecccCCCCCCCCCHHHHHHHHHHHHH--hCeEEEEeccccCCCccchHHHHHHhCCCCCEEEee--ccccCCccce
Confidence 9999999999999986 7789999999 9999999999975432 122333447887776 9999998999
Q ss_pred EEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 015729 211 IVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVE 290 (401)
Q Consensus 211 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~ 290 (401)
.++.++...+.+.+... |+ ++.-+++.+++..++++.+.+++ ..++.++..+++.+.|+
T Consensus 263 A~la~~~~~~~~~~G~H----------------gS--TfGGNpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~ 321 (404)
T COG4992 263 AMLATEEIASAFTPGDH----------------GS--TFGGNPLACAVALAVLEVLLEEG---LLENVREKGEYLLQRLR 321 (404)
T ss_pred eeEEchhhhhcCCCCcc----------------cC--CCCcCHHHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHH
Confidence 99998665555544322 33 34466778888999999988754 77888899999999999
Q ss_pred Hc--CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 291 AW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 291 ~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
++ .++++.. -...+.++.+++.....+.++.+.|.++ |+.+.+. .++.+|+.+...++++|++++++++++
T Consensus 322 ~l~~~~~~v~~--vRG~GLmiGiel~~~~~a~~~~~~~~~~-gvL~~~a----~~~ViR~~PpL~i~~eei~~~~~~l~~ 394 (404)
T COG4992 322 ELKRRYPLVKE--VRGRGLMIGIELKEPYRARDIVRALREE-GVLVLPA----GPNVIRFLPPLVITEEEIDEALDALER 394 (404)
T ss_pred HHhhcCCceee--eecceeEEEEEecCcccHHHHHHHHHHC-CeEEecC----CCCeEEecCCccCCHHHHHHHHHHHHH
Confidence 86 4443332 2345678888884433578999999887 8887644 345899998889999999999999999
Q ss_pred HHHhc
Q 015729 369 ILKDV 373 (401)
Q Consensus 369 ~l~~~ 373 (401)
+++..
T Consensus 395 ~l~~~ 399 (404)
T COG4992 395 ALAAA 399 (404)
T ss_pred HHHHh
Confidence 99754
No 225
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.92 E-value=1.9e-22 Score=190.26 Aligned_cols=289 Identities=16% Similarity=0.061 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......++++.++++.|.+ .+++++|+++|+..++.+++++||+|+++.+.|.+.. +..+....++++..++.
T Consensus 49 ~~p~~~~le~~lA~l~g~~---~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-- 123 (382)
T TIGR02080 49 GNPTRDLLQQALAELEGGA---GAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ-- 123 (382)
T ss_pred CCchHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC--
Confidence 3456779999999999853 3899999999999999999999999999999877544 33445555677776642
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
.|++++++++++ ++++|++++|+||||.+.|+++|.++|++ +|+++++|++++.+..... ...++|++++
T Consensus 124 ---~d~~~l~~ai~~----~tklV~l~~p~NPtG~~~dl~~I~~la~~--~g~~vvvD~a~~~~~~~~p-l~~gaDivv~ 193 (382)
T TIGR02080 124 ---GDEQALRAALAQ----KPKLVLIETPSNPLLRVVDIAKICHLAKA--VGAVVVVDNTFLSPALQNP-LALGADLVLH 193 (382)
T ss_pred ---CCHHHHHHhcCc----CceEEEEECCCCCCCEecCHHHHHHHHHH--cCCEEEEECCCcccccCCc-hhhCCCEEEe
Confidence 379999999874 56999999999999999999999999999 9999999999976643222 2457899999
Q ss_pred cCCCcccCCCc--ceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.+|+++|+.+ .|+++. +++..+++.... . ++..+.++.... .++..++ -+..+
T Consensus 194 S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~-------------~-----~~g~~~sp~~a~---l~lr~l~--tl~~R 250 (382)
T TIGR02080 194 SCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA-------------N-----NLGVTGGAFDSY---LTLRGLR--TLVAR 250 (382)
T ss_pred ecceeccCCCCceeEEEEeCCHHHHHHHHHHH-------------H-----ccCCCCCHHHHH---HHHcccc--hHHHH
Confidence 99999987665 487766 455555443210 0 112234443222 2222222 24556
Q ss_pred HHHHHHHHHHHHHHHHHc-CCc-----cccCCCc--------cCCceeEEEEcCCCCC-HHHHHHHHHhhCCeEEccCCC
Q 015729 275 IERHRRLGKATRLAVEAW-GLK-----NCTQKEE--------WFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLGLGLN 339 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~-----~~~~~~~--------~~~~~~~~~~~~~~~~-~~~l~~~L~~~~~i~v~~g~~ 339 (401)
+++..+++..+.+.|++. .++ -+...+. ...+.++.|.++++.. ...+.+.|. -+++.+..|..
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-~~~~~~s~G~~ 329 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLS-LFTLAESLGGV 329 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCC-cceEeccCCCC
Confidence 788889999999999874 222 1111100 1245688899843211 123333332 22333333311
Q ss_pred -----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 340 -----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 340 -----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
...++.+|||+.. ||.+.+++-|+.+|+
T Consensus 330 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~ 380 (382)
T TIGR02080 330 ESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLR 380 (382)
T ss_pred cceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 0123569998654 677778888777775
No 226
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=1.7e-22 Score=191.34 Aligned_cols=216 Identities=16% Similarity=0.170 Sum_probs=162.2
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCC
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~ 116 (401)
.......+++++++++.|.+. .+++++|++|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++.
T Consensus 61 ~~~p~~~~le~~lA~l~g~~~---~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~- 136 (398)
T PRK08249 61 NTNPTVQAFEEKVRILEGAEA---ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET- 136 (398)
T ss_pred CCChHHHHHHHHHHHHhCCCe---EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-
Confidence 345668899999999999754 677788899999999889999999999999887654 44456678988887763
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEE
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVAL 196 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~ 196 (401)
.|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+... .....++|+++
T Consensus 137 ----~d~e~l~~~i~~----~tklV~ie~p~NPtg~v~dl~~I~~la~~--~gi~livD~t~a~~~~~-~~l~~~~Divv 205 (398)
T PRK08249 137 ----GDHEQIEAEIAK----GCDLLYLETPTNPTLKIVDIERLAAAAKK--VGALVVVDNTFATPINQ-NPLALGADLVI 205 (398)
T ss_pred ----CCHHHHHHhcCC----CCeEEEEECCCCCCCccCCHHHHHHHHHH--cCCEEEEECCcCccccC-CchhhCCCEEe
Confidence 489999999874 56999999999999999999999999999 99999999998855322 12245799999
Q ss_pred ecCCCcccCCC-c-ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 197 TGSQKALSLPT-G-MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 197 ~s~~K~l~g~~-g-~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
+|.+|+++|.. . .|+++.++++.+++...+ .. .| .+.+...++.+...++. +...
T Consensus 206 ~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-------------~~-~g----~~~s~~~a~l~l~~l~t-----L~~R 262 (398)
T PRK08249 206 HSATKFLSGHADALGGVVCGSKELMEQVYHYR-------------EI-NG----ATMDPMSAYLILRGMKT-----LKLR 262 (398)
T ss_pred ccCceecCCCCCceEEEEECCHHHHHHHHHHH-------------Hh-cC----CCCCHHHHHHHHhCcch-----HHHH
Confidence 99999996543 1 378888887776654321 11 12 23444332322233332 4557
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 015729 275 IERHRRLGKATRLAVEAW 292 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~ 292 (401)
.++..++++.+.+.|++.
T Consensus 263 ~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 263 VRQQQESAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 788889999999999874
No 227
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.91 E-value=6.7e-22 Score=182.99 Aligned_cols=327 Identities=17% Similarity=0.156 Sum_probs=206.0
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCC-----------Ccc-HHHHHHHHHHHHHHHhcCCCCceE--EecCChhHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR-----------SPA-VPALTKTLLEDIKKIFKTTSGTPF--LIPTTGTGAWE 74 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~~~-~~~~~~~l~~~la~~~g~~~~~~i--~~~~g~t~a~~ 74 (401)
.+..+.|.=-.+++.|++++.....+.+ +.. ..++..-++++++++||.++..+- +-+.||+.|+.
T Consensus 21 ~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~ 100 (399)
T PF00464_consen 21 STLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANL 100 (399)
T ss_dssp HSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHH
T ss_pred cCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHH
Confidence 4566778878889999999988443321 112 234444577888999999844332 33678999999
Q ss_pred HHHhccCCCCCeEEEEcC---CcchHHHHHHH-----HHcCCcEEEEeCC-CCCCCChHHHHHHHhccCCCCceEEEEEe
Q 015729 75 SALTNTLSPGDRIISFLI---GQFSLLWIDQQ-----QRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVH 145 (401)
Q Consensus 75 ~~~~~~~~~gd~vl~~~~---~~~~~~~~~~~-----~~~g~~~~~v~~~-~~~~~d~~~le~~~~~~~~~~~~~i~~~~ 145 (401)
+++.++++|||+|+..+. ||.++....-. .....+.+.++++ ..+.+|.+++++.+.+ .+|++|++..
T Consensus 101 av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~---~kPklIi~G~ 177 (399)
T PF00464_consen 101 AVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKE---HKPKLIICGA 177 (399)
T ss_dssp HHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHH---H--SEEEEE-
T ss_pred HHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhh---cCCCEEEECc
Confidence 999999999999999987 44443321111 2234467777887 4568999999999987 5789999987
Q ss_pred cCCCcccccchHHHHHHhhhcCCCcEEEEecccccCc-----ceeccCcccceEEEecCCCcccCCCcceEEEec-----
Q 015729 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA-----IDFRMDEWGIDVALTGSQKALSLPTGMGIVCAS----- 215 (401)
Q Consensus 146 ~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~-----~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~----- 215 (401)
..+| ...|.+++.++|++ .|.+|++|.+|..|. .+-.+. .+|++++|.||+|.||.| |++.++
T Consensus 178 S~y~--~~~d~~~~reIad~--vga~l~~D~sH~~GLIa~g~~~~P~~--~ADvvt~sThKtl~GPrg-giI~~~~~~~~ 250 (399)
T PF00464_consen 178 SSYP--RPIDFKRFREIADE--VGAYLMADISHIAGLIAGGLFPNPFP--YADVVTGSTHKTLRGPRG-GIILTNKGSKN 250 (399)
T ss_dssp SSTS--S---HHHHHHHHHH--TT-EEEEE-TTTHHHHHTTSS--GCC--TSSEEEEESSGGG-SSS--EEEEES-SEEE
T ss_pred hhcc--CccCHHHHHHHHHh--cCcEEEecccccccceehheecCccc--cceEEEeeccccccccCc-eEEEEcCCccc
Confidence 5544 56789999999999 999999999997553 333343 489999999999998886 999999
Q ss_pred ---------HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 015729 216 ---------PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATR 286 (401)
Q Consensus 216 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~ 286 (401)
+++.+++.... | .| ..+++....++++..++....+..++...++..+|++.|.
T Consensus 251 ~~~~~~~~~~~l~~~I~~av--------------f-P~--~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La 313 (399)
T PF00464_consen 251 VDKKGKEIDEELAEKIDSAV--------------F-PG--LQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALA 313 (399)
T ss_dssp E-TTS-EEEHHHHHHHHHHH--------------T-TT--T-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccHHHHHHHhcccc--------------C-CC--cccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 55555544211 1 11 1334677778888888887665556889999999999999
Q ss_pred HHHHHcCCccccCCCccCCceeEEEEcC-CCCCHHHHHHHHHhhCCeEEccCCCC-----CCCcEEEEeeccc----CCH
Q 015729 287 LAVEAWGLKNCTQKEEWFSDTVTAVIVP-SHINSSEIVRRAWQRYNLSLGLGLNK-----VAGKVFRIGHLGH----LNE 356 (401)
Q Consensus 287 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~~i~v~~g~~~-----~~~~~~Ri~~~~~----~~~ 356 (401)
+.|.+.|+++.... .....+++.+. .+++..+..+.|. +.||.+....-+ .....+||++..- ..+
T Consensus 314 ~~L~~~G~~v~~gg---Td~H~vlvd~~~~~~~g~~a~~~Le-~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e 389 (399)
T PF00464_consen 314 EALQERGFKVVTGG---TDNHQVLVDLRSFGIDGKEAEKALE-EAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKE 389 (399)
T ss_dssp HHHHHTT-EEGGGS----SSSEEEEEGGGGTS-HHHHHHHHH-HTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--H
T ss_pred HHHhhCCcEEEECC---CCCCeEEEEecccccchHHHHHHHH-hcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCH
Confidence 99999999998632 34557777873 3567778877775 559998643221 2235699997552 246
Q ss_pred HHHHHHHHHH
Q 015729 357 LQLLGCLAGV 366 (401)
Q Consensus 357 ~di~~~~~~i 366 (401)
+|++++.+.|
T Consensus 390 ~dm~~iA~~I 399 (399)
T PF00464_consen 390 EDMKEIAELI 399 (399)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhC
Confidence 7777766543
No 228
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=1.2e-21 Score=200.85 Aligned_cols=344 Identities=13% Similarity=0.055 Sum_probs=226.3
Q ss_pred ccccCCCcCChHHHHHHHccCcCC---C-CCc-----cHHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHHHHHHH---
Q 015729 11 HLFVPGPVHIPDQVIRAMNRNNED---Y-RSP-----AVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGAWESAL--- 77 (401)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~---~-~~~-----~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t~a~~~~~--- 77 (401)
+.++.+.....+.+.+.+...... | ..+ +..+.+.++++.+++++|.+. +.+ .++|++|....+
T Consensus 502 i~lGsct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d~---~sl~~~~ga~ge~agL~a~ 578 (954)
T PRK05367 502 IPLGSCTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYDA---VSLQPNAGAQGEYAGLLAI 578 (954)
T ss_pred eeCCcCCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCCC---EEECccHHHHHHHHHHHHH
Confidence 445567777788777777664322 1 122 144668899999999999985 444 445556553333
Q ss_pred hcc-CCCCC----eEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 78 TNT-LSPGD----RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 78 ~~~-~~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+.. .++|+ +|++++..|.++. ..+...|++++.++++.++.+|+++|+++++++. .++.+|+++++++..+.
T Consensus 579 r~~~~~~G~~~r~~vlis~~aH~snp--~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~-~~la~V~it~pst~G~~ 655 (954)
T PRK05367 579 RAYHESRGEGHRDVCLIPSSAHGTNP--ASAVMAGMKVVVVACDENGNIDLDDLRAKAEEHA-DNLAAIMITYPSTHGVF 655 (954)
T ss_pred HHHhhccCCCCCCEEEEEchhhhhhH--HHHHHCCCEEEEECCCCCCCcCHHHHHHHHhccC-CCeEEEEEEcCCCCeee
Confidence 222 24555 5888888887764 3467789999999998888999999999997632 35788888887766333
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCccee-ccCcccceEEEecCCCcccC-----CCcceEEEecHHHHHHhccCC
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-RMDEWGIDVALTGSQKALSL-----PTGMGIVCASPKALEASKTAK 226 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~di~~~s~~K~l~g-----~~g~G~l~~~~~~~~~~~~~~ 226 (401)
..|+++|.++|++ +|+++++|+++..+...+ .....|+|++++|+||||+. ++|+|++++++.+...+....
T Consensus 656 e~~I~eI~~i~h~--~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~ 733 (954)
T PRK05367 656 EETIREICEIVHE--HGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHP 733 (954)
T ss_pred cCCHHHHHHHHHH--cCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCc
Confidence 4789999999999 999999999997553333 33467899999999999854 455779999876554444332
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL---IFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
.... ....+..+..+.+..+...+..+..+ +-.+|+++..++...+++++.+.|.+. .+.+..+...
T Consensus 734 v~~~---------~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~ 804 (954)
T PRK05367 734 VQIA---------GGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGR 804 (954)
T ss_pred cCcC---------CCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCC
Confidence 1100 00001101111222121222223333 334557777777789999999999873 3332222111
Q ss_pred cCCceeEEE-EcCC--CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 303 WFSDTVTAV-IVPS--HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 303 ~~~~~~~~~-~~~~--~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.....++.+ .++. +++..++.++|.+ +|+.......+ ..+.++|++....+++|+|+++++++.+.+++
T Consensus 805 ~~~e~i~~~~~~~~~~g~~~~di~krL~d-~G~~~~t~~~p-v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~ 876 (954)
T PRK05367 805 VAHECILDLRPLKESTGITVDDIAKRLID-YGFHAPTMSFP-VAGTLMVEPTESESKAELDRFCDAMIAIRAEI 876 (954)
T ss_pred cccceEEEeecccccCCCCHHHHHHHHHH-CCCeEeecCCc-cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHH
Confidence 122223333 2222 4677899999965 48876543333 35679999998999999999999999887765
No 229
>PRK06460 hypothetical protein; Provisional
Probab=99.91 E-value=3.3e-22 Score=188.43 Aligned_cols=292 Identities=13% Similarity=0.098 Sum_probs=190.4
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCC
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~ 116 (401)
.......++++++++++|.+. .+++++|++|+..++.+++++||+|+++.+.+.+.+ +...++..|++++.++.+
T Consensus 42 ~~~p~~~~L~~~lA~l~g~~~---~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~ 118 (376)
T PRK06460 42 EANPTVLELTKKIVELENAEM---GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG 118 (376)
T ss_pred CCCccHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC
Confidence 344668899999999999865 234466789999998899999999999877554332 446678889998888754
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEE
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVAL 196 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~ 196 (401)
+.+.+++.++ ++++++++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+.. ......++|+++
T Consensus 119 -----~~~~l~~~~~----~~tklV~l~sp~NPtG~v~d~~~I~~la~~--~g~~vivDea~~~~~~-~~~l~~~~divv 186 (376)
T PRK06460 119 -----SDNIIEKAKS----KRYDVVFVENITNPLLRVVDITELSKVCKE--NGSILIVDATFSTPIN-QKPLELGADIVV 186 (376)
T ss_pred -----CHHHHHHhcC----CCceEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCcCcccc-CChhhcCCCEEE
Confidence 2344555443 467999999999999999999999999999 9999999999876422 122234689999
Q ss_pred ecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 197 TGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 197 ~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
.|.+|+++|..+ .|+++.++++.+++.... ..+ | .+.+.. .+..+++.. ..++..
T Consensus 187 ~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~------------~~~--g----~~~~~~---~a~~~l~~~--~~l~~r 243 (376)
T PRK06460 187 HSASKFLAGHNDVIAGLAAGYGKLLNVIDQMR------------RTL--G----TSLDPH---AAYLTLRGI--KTLKIR 243 (376)
T ss_pred eecceeccCCCCceEEEEecCHHHHHHHHHHH------------Hhc--C----CCCCHH---HHHHHHhch--hhHHHH
Confidence 999999975432 589999888776664321 001 1 123332 122222211 125667
Q ss_pred HHHHHHHHHHHHHHHHHc-CCc-cc----cCCCc--------cCCceeEEEEcCCC-CCHHHHHHHHHhhCCeEEccCCC
Q 015729 275 IERHRRLGKATRLAVEAW-GLK-NC----TQKEE--------WFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSLGLGLN 339 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~-~~----~~~~~--------~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~i~v~~g~~ 339 (401)
+++..++++++.+.|++. .+. +. ...+. ...+.++.|++..+ ..+.++.+.|. -+.+.+..|..
T Consensus 244 ~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~-~~~~~~s~Gg~ 322 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLK-LIIPAQTLGGV 322 (376)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCC-cceeccCCCCC
Confidence 888899999999999874 321 11 11110 12456888998432 11223333331 11122222200
Q ss_pred -----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 340 -----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 340 -----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...++.+|+|+.. ||.|.+++.|+.+|+.+
T Consensus 323 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 323 NSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALSTL 375 (376)
T ss_pred ceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 0124569998654 67788888888777643
No 230
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.91 E-value=2.7e-22 Score=189.67 Aligned_cols=214 Identities=17% Similarity=0.168 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.+++++|.+. +++++||++|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++.+
T Consensus 53 ~p~~~~le~~la~l~g~~~---~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~-- 127 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAER---AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT-- 127 (380)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC--
Confidence 4557899999999999854 678999999999999888999999999887665543 445677789999988764
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+.... ....++|++++|
T Consensus 128 ---d~~~l~~~i~~----~tklV~le~p~np~g~~~dl~~I~~la~~--~gi~livD~a~~~~~~~~-pl~~g~Divv~S 197 (380)
T TIGR01325 128 ---DLNAWEAAVKP----NTKLVFVETPSNPLGELVDIAALAELAHA--IGALLVVDNVFATPVLQQ-PLKLGADVVVYS 197 (380)
T ss_pred ---CHHHHHHhcCC----CceEEEEECCCCCCCeeeCHHHHHHHHHH--cCCEEEEECCCcccccCC-chhhCCCEEEee
Confidence 78999988863 56999999999999999999999999999 999999999987543222 224578999999
Q ss_pred CCCcccCCC-cc-eEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPT-GM-GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~-g~-G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.+|+++|+. .+ |+++.+++..+.+.... . ..| .+.+...++.+...++ .+....+
T Consensus 198 ~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~------------~--~~g----~~~~p~~a~~~l~~l~-----tl~~r~~ 254 (380)
T TIGR01325 198 ATKHIDGQGRVMGGVIAGSEELMAEVAVYL------------R--HTG----PAMSPFNAWVLLKGLE-----TLSLRMQ 254 (380)
T ss_pred ccceecCCCCeEEEEEEeCHHHHHHHHHHH------------H--hhC----CCCCHHHHHHHHhccC-----cHHHHHH
Confidence 999997542 23 78888888766554210 0 012 1234332222222222 2455778
Q ss_pred HHHHHHHHHHHHHHHc
Q 015729 277 RHRRLGKATRLAVEAW 292 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~ 292 (401)
+..++++.+.+.|++.
T Consensus 255 ~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQ 270 (380)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8888999999999875
No 231
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.91 E-value=3.8e-22 Score=176.87 Aligned_cols=336 Identities=15% Similarity=0.134 Sum_probs=247.4
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCCCCCc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL- 81 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~- 81 (401)
|.+-||--.....+.+++.+.+.+++..-.+. +....-.+|++.++++-..+. .++.+++--|+...+..+.
T Consensus 177 CSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~a---ALlFsSCfVANDstLftLak 253 (570)
T KOG1360|consen 177 CSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEA---ALLFSSCFVANDSTLFTLAK 253 (570)
T ss_pred ecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcc---eeeeeeeeeccchHHHHHHH
Confidence 45677777777777778888887765432221 122334589999999887766 4555667778877776543
Q ss_pred -CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHH
Q 015729 82 -SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVR 160 (401)
Q Consensus 82 -~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~ 160 (401)
-||-.|+. +.+.+... ..-.+..+++-.....+ |++.|++++.+.+-..||+|.+..+++++|.+.|+++|.
T Consensus 254 ~lpgcei~S-D~gNHASM-I~GIrns~v~K~IFrHN-----D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcpleelc 326 (570)
T KOG1360|consen 254 KLPGCEIFS-DEGNHASM-IQGIRNSRVPKHIFRHN-----DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELC 326 (570)
T ss_pred HCCCcEEec-cccchHHH-HHHhhhcCCcceeeccC-----CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHH
Confidence 36655544 44444333 23345455544434433 899999999876656799999999999999999999999
Q ss_pred HHhhhcCCCcEEEEecccccCccee--------ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 161 KLLDEYRHPALFLVDGVSSICAIDF--------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 161 ~l~~~~~~~~~li~D~a~~~~~~~~--------~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+++++ ||.+..+|++|+.|..-. |.--..+||+.++..|.|+ --| |++..+..+++-++...
T Consensus 327 Dvah~--yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafG-cVG-GYIAat~~LvDmiRSyA------ 396 (570)
T KOG1360|consen 327 DVAHK--YGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFG-CVG-GYIAATRKLVDMIRSYA------ 396 (570)
T ss_pred HHHHH--hCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcc-ccc-ceehhhhhHHHHHHHhc------
Confidence 99999 999999999998663211 1111247999999999985 444 89999999988776543
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 312 (401)
.|.-|..+.|+.-++++.++++++..++-...+++.+++..++++.|.++|+++.... + .++.+.
T Consensus 397 ----------aGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~p----S-HIiPv~ 461 (570)
T KOG1360|consen 397 ----------AGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPNP----S-HIIPVR 461 (570)
T ss_pred ----------CceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCCC----c-ceeeee
Confidence 3433455677777888899999888654467888889999999999999999998742 2 466677
Q ss_pred cCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCCCC
Q 015729 313 VPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPV 377 (401)
Q Consensus 313 ~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~~ 377 (401)
+.+..-+.+++..|.++++|+|...-++ .....+||.+...+|.+-++.+++.+..+.++++++.
T Consensus 462 vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l~~ 529 (570)
T KOG1360|consen 462 VGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGLPR 529 (570)
T ss_pred ccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 7555556789999999999999866332 1234599999999999999999999999999998864
No 232
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.91 E-value=8e-22 Score=175.71 Aligned_cols=300 Identities=14% Similarity=0.119 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHhc----CC---CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC
Q 015729 44 TKTLLEDIKKIFK----TT---SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 44 ~~~l~~~la~~~g----~~---~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 116 (401)
..++++.+|+++. .. +++.+++++|+|.|++.++..+..|||..++++|.|++.. ..+.-+.|++++.|.+.
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfd-rdl~~rTgveivpv~c~ 201 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFD-RDLRWRTGVEIVPVHCS 201 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCccc-ccceeccCceEEEEEee
Confidence 4467777776664 22 4566999999999999999899999999999999666543 45667789999999886
Q ss_pred CC--CCCChHHHHHHHhc--cCCCCceEEEEEecCCCcccccchHH---HHHHhhhcCCCcEEEEecccccCccee----
Q 015729 117 WG--EGAKLDVLASKLAA--DTAHTIKAICIVHNETATGVTNNLSK---VRKLLDEYRHPALFLVDGVSSICAIDF---- 185 (401)
Q Consensus 117 ~~--~~~d~~~le~~~~~--~~~~~~~~i~~~~~~n~tG~~~~l~~---i~~l~~~~~~~~~li~D~a~~~~~~~~---- 185 (401)
.. .+++.+++|.++.+ ..+.+++.+++++|+||.|.+++-++ +..++.+ +|+.+|+|+.++.-.+..
T Consensus 202 Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~--kniHvI~DEIya~sVF~~~~F~ 279 (471)
T KOG0256|consen 202 SSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASR--KNIHVISDEIYAGSVFDKSEFR 279 (471)
T ss_pred cCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhh--cceEEEeehhhcccccCccCce
Confidence 64 36789999888764 22357999999999999999997554 5666677 999999999987433211
Q ss_pred -------ccC-cccceEEEecCCCcccCCCcc--eEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHH
Q 015729 186 -------RMD-EWGIDVALTGSQKALSLPTGM--GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQL 255 (401)
Q Consensus 186 -------~~~-~~~~di~~~s~~K~l~g~~g~--G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 255 (401)
+.. .....-++.|.+|=| |.+|. |+++...+-........ + +++. .+...
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~-GlpGfRvGviYS~ne~VvsaA~km-----------------s-sf~~-vSs~t 339 (471)
T KOG0256|consen 280 SVLEVRKDPHLDPDRVHIVYSLSKDF-GLPGFRVGVIYSNNEDVVSAATKM-----------------S-SFGL-VSSQT 339 (471)
T ss_pred EHHHHhhccccCCCcEEEEEEecccc-CCCceEEEEEEecChHHHHHHHHH-----------------h-hccC-CcHHH
Confidence 111 112334678889988 57665 99997765533322110 0 1111 22221
Q ss_pred HHHHHHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCC---C--CC-HHHHHHHHH
Q 015729 256 LYGLRAAL--DLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS---H--IN-SSEIVRRAW 327 (401)
Q Consensus 256 ~~a~~~al--~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~---~--~~-~~~l~~~L~ 327 (401)
..-+...| +.+.+.-+....+|++...+++.+.|+++|++.... .++.++|+.+.. . .+ .-++.+++.
T Consensus 340 Q~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s----~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~ 415 (471)
T KOG0256|consen 340 QYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKS----NAGLFCWVDLRKLLTSLTFEGELELWERIL 415 (471)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeec----CCeeEEEEEhHHhcCcCChHHHHHHHHHHH
Confidence 11111111 233333356677788888889999999999999875 467788888631 1 11 225666777
Q ss_pred hhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 328 QRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 328 ~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
++-++.+.||.. +...+|+|+++ +...++.++-++++|+..+.
T Consensus 416 ~~vklnlSpG~s~~C~EpGWFRvcF-An~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 416 DNVKLNLSPGSSCHCHEPGWFRVCF-ANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HhhccccCCCCcceecCCCeEEEEe-ccCCHHHHHHHHHHHHHHHH
Confidence 766899999944 66789999955 44667777779999998886
No 233
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=9.2e-22 Score=188.26 Aligned_cols=311 Identities=15% Similarity=0.137 Sum_probs=203.6
Q ss_pred hHHHHHHHccCcCC--CC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCC-------CeEEEE
Q 015729 21 PDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-------DRIISF 90 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~g-------d~vl~~ 90 (401)
++.+.+++.+.... +. .....+...++.+.++++.+. +.+++++||++|++.++......+ ++|++.
T Consensus 57 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~---~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~ 133 (396)
T PRK02627 57 HPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM---DKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITA 133 (396)
T ss_pred CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC---CEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEE
Confidence 35666666553321 11 112345667888888888655 349999999999999987543222 679999
Q ss_pred cCCcchHHHHHHHHHcCCcEE---EEeCCCCC----CCChHHHHHHHhccCCCCceEEEEEecCCCccc-ccc---hHHH
Q 015729 91 LIGQFSLLWIDQQQRLNFNVD---VVESDWGE----GAKLDVLASKLAADTAHTIKAICIVHNETATGV-TNN---LSKV 159 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~----~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~-~~~---l~~i 159 (401)
.+++++........ .+.... ..+...+. ..|++++++++. ++++++++++++|++|. .++ +++|
T Consensus 134 ~~~yhg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l 208 (396)
T PRK02627 134 ENSFHGRTLATLSA-TGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQAL 208 (396)
T ss_pred CCCcCcccHHHHHh-cCCccccccCCCCCCCceEeCCCCHHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHH
Confidence 98888665322221 121111 11111110 118899999885 46799999999999994 443 7889
Q ss_pred HHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccch
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
.++|++ +|+++|+|++++.... .++.....+|++++ +|.++++.++|++++++++.+.+.....
T Consensus 209 ~~l~~~--~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~--sK~~~~G~rig~~~~~~~~~~~~~~~~~------- 277 (396)
T PRK02627 209 RELCDE--NGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTL--AKGLGGGVPIGAVLAKEKVADVFTPGDH------- 277 (396)
T ss_pred HHHHHH--cCCEEEEechhcCCCccCceeeehhcCCCCCEEEE--cchhhCCcccEEEEEcHHHHhccCCCCC-------
Confidence 999999 9999999999873211 11122223566654 5999766678999999988776643211
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEE
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~ 312 (401)
...++.+...++++.++++.+... +..++.+++.+.+++.|.++ .+....... ..+.++++.
T Consensus 278 -----------~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~i~ 341 (396)
T PRK02627 278 -----------GSTFGGNPLACAAALAVIEIIEEE---GLLENAAEVGEYLRAKLRELLEKYPGIKEVR--GLGLMIGIE 341 (396)
T ss_pred -----------CCCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeeeec--cCcEEEEEE
Confidence 112345666677777788766553 34566667777777777664 222221111 234567777
Q ss_pred cCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 313 VPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 313 ~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++ .+..++.+.|.++ ||.+.++. .+++|+++...++++++++++++|+++++++
T Consensus 342 ~~--~~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 342 LD--RPAAEIVKKALEK-GLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ec--CcHHHHHHHHHHC-CeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 73 2578899999877 99998752 3679998776789999999999999998754
No 234
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.91 E-value=9.9e-22 Score=200.44 Aligned_cols=315 Identities=13% Similarity=0.103 Sum_probs=230.2
Q ss_pred CcCChHHHHHHHccCcCCC--C---Ccc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCC--
Q 015729 17 PVHIPDQVIRAMNRNNEDY--R---SPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPG-- 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~--~---~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~g-- 84 (401)
+..+|+.+++++....... + .++ ..+.+.+++.++++++|.+..+ +.++.++|++.++++.+. +++|
T Consensus 114 ~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~an-aSL~d~aTAaaea~~~a~~~~~g~~ 192 (993)
T PLN02414 114 NTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSN-ASLLDEGTAAAEAMAMCNNILKGKK 192 (993)
T ss_pred CccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhh-EeecCChHHHHHHHHHHHhcccCCC
Confidence 3447788878888855321 1 111 2344779999999999998755 899999999999877553 4544
Q ss_pred CeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHH
Q 015729 85 DRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 85 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
|+|++++..|+++. +...++..|++++.++.+.. + ... +.+ +.++++..|.+|.+.|+++|.++
T Consensus 193 ~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~----~~v-~~vlvq~P~~~G~v~dv~~I~~~ 258 (993)
T PLN02414 193 KKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS----GDV-CGVLVQYPATDGEVLDYAEFVKN 258 (993)
T ss_pred CEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc----Cce-EEEEEecCCCCeEEcCHHHHHHH
Confidence 78999999988876 66777889999999986431 1 011 122 33456667789999999999999
Q ss_pred hhhcCCCcEEEEecccccCccee-ccCcccceEEEecCCCcccCCCc-----ceEEEecHHHHHHhccCCCC--------
Q 015729 163 LDEYRHPALFLVDGVSSICAIDF-RMDEWGIDVALTGSQKALSLPTG-----MGIVCASPKALEASKTAKSV-------- 228 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~di~~~s~~K~l~g~~g-----~G~l~~~~~~~~~~~~~~~~-------- 228 (401)
|++ +|+++++ +++..+...+ +..++|+|++++++|||+ +|.| .|++++++++.+.++.....
T Consensus 259 ah~--~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~ 334 (993)
T PLN02414 259 AHA--NGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGK 334 (993)
T ss_pred HHH--cCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCC
Confidence 999 9999999 7777665555 477889999999999987 3333 79999999987765532221
Q ss_pred cc---ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Q 015729 229 RV---FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI-----FEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK 300 (401)
Q Consensus 229 ~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 300 (401)
.. ..+...+..+++.++ +++....++.+++... ...|++++.++..+++.++++.|.+.|+++..+
T Consensus 335 ~~~~l~LqtReqhiRrEkaT-----sNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~- 408 (993)
T PLN02414 335 PALRMAMQTREQHIRRDKAT-----SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSL- 408 (993)
T ss_pred cccccccccccchhhhcccc-----cchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCC-
Confidence 00 122345556778776 7775555666666433 347899999999999999999998889887543
Q ss_pred CccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 301 EEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
. ... .+.|.++ +..++.++|.++ ||.++... ++.+|+|+..++|++|||.+++++.
T Consensus 409 -~-~f~-~vt~~~~---~~~~v~~~L~~~-gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 409 -P-FFD-TVKVKCS---DADAIADAAAKV-GINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred -C-CcC-eEEEecC---CHHHHHHHHHHC-CCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHc
Confidence 2 233 4556664 457888999876 98766432 4579999999999999999999996
No 235
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=2.7e-22 Score=189.37 Aligned_cols=287 Identities=17% Similarity=0.111 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~ 119 (401)
.....++++.+++++|.+. +++++||+.|+..++.+++++||+|+++.+.|.+.. +.......|++++.+.
T Consensus 52 np~~~~lE~~lA~l~g~~~---~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~----- 123 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVD---ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY----- 123 (385)
T ss_pred CccHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-----
Confidence 3557799999999999764 677889999999999889999999999999887765 2222356788877663
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
+|++++++++++ .++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+... .....|+|++++|.
T Consensus 124 -~d~~~l~~~i~~---~~tklV~ie~p~NPtG~v~dl~~I~~la~~--~gi~livD~t~a~~~~~-~~l~~GaDivv~S~ 196 (385)
T PRK08574 124 -PSTEDIIEAIKE---GRTKLVFIETMTNPTLKVIDVPEVAKAAKE--LGAILVVDNTFATPLLY-RPLRHGADFVVHSL 196 (385)
T ss_pred -CCHHHHHHhcCc---cCceEEEEECCCCCCCEecCHHHHHHHHHH--cCCEEEEECCCCccccC-ChhhhCCcEEEeeC
Confidence 368899998874 257999999999999999999999999999 99999999999876432 22346899999999
Q ss_pred CCcccCCCc--ceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 200 QKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 200 ~K~l~g~~g--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
+|+++|+.. .|++++ ++++.+++... ... .| ...++...+.+..+++ -+..+.+
T Consensus 197 sK~l~g~~d~~gG~vi~~~~~~~~~~~~~-------------~~~-~g----~~~~p~~a~l~l~~l~-----tL~~R~~ 253 (385)
T PRK08574 197 TKYIAGHNDVVGGVAVAWSGEFLEELWEW-------------RRR-LG----TIMQPFEAYLVLRGLK-----TLEVRFE 253 (385)
T ss_pred ceeecCCCCceeEEEEECcHHHHHHHHHH-------------HHh-cC----CCCCHHHHHHHHcccC-----cHHHHHH
Confidence 999976532 264544 56655554321 110 12 1344432222222222 2556778
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccC----CCc----------cCCceeEEEEcCCCCCHHHHHHHHHhhCCe---EEccC
Q 015729 277 RHRRLGKATRLAVEAW-GLK-NCTQ----KEE----------WFSDTVTAVIVPSHINSSEIVRRAWQRYNL---SLGLG 337 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~----~~~----------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i---~v~~g 337 (401)
+..++++.+.+.|++. .+. +..+ .+. ...+.++.|++. + +.++. ..+.++-.+ .+..|
T Consensus 254 ~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~-~-~~~~~-~~~~~~l~l~~~~~s~G 330 (385)
T PRK08574 254 RQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVK-G-GRDAV-LKFLRSLKLIKPSPSLG 330 (385)
T ss_pred HHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeC-C-CHHHH-HHHHHcCCcceEccCCC
Confidence 8888999999999874 332 1111 100 124568889884 3 22332 223332222 22222
Q ss_pred CC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 338 LN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 338 ~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.. ....+.+|||+.. ||.+.+++-|+++|+.
T Consensus 331 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~~ 384 (385)
T PRK08574 331 GVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALGS 384 (385)
T ss_pred CCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 11 0113569998654 6777788777777754
No 236
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.91 E-value=1.1e-21 Score=186.04 Aligned_cols=214 Identities=15% Similarity=0.122 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.++++.|.+. .+++++|+.|+..++.+++++||+|+++...|.+.+ +...++..|++++.++.+
T Consensus 69 ~p~~~~le~~lA~l~g~~~---al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~-- 143 (403)
T PRK07810 69 NPTVSMFEERLRLIEGAEA---CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGE-- 143 (403)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCC--
Confidence 3457799999999999764 788899999999998888999999999886554443 445677789999998743
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+.... ....++|++++|
T Consensus 144 ---d~~~l~~ai~~----~tklV~~esp~Nptg~v~dl~~I~~la~~--~g~~vivD~a~a~~~~~~-~~~~gaDivv~S 213 (403)
T PRK07810 144 ---DLSQWEEALSV----PTQAVFFETPSNPMQSLVDIAAVSELAHA--AGAKVVLDNVFATPLLQR-GLPLGADVVVYS 213 (403)
T ss_pred ---CHHHHHHhcCc----CceEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCCccccCC-hhhcCCcEEEcc
Confidence 89999999874 56999999999999999999999999999 999999999998765422 234689999999
Q ss_pred CCCcccCCCc--ceEEEecHHHHHH-hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALEA-SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++|... .|+++.+++.+.. +... .. ..| ...+...++.+..+++ -+..+.
T Consensus 214 ~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~------------~~--~~g----~~~s~~~a~l~l~~L~-----tl~~R~ 270 (403)
T PRK07810 214 GTKHIDGQGRVLGGAILGDREYIDGPVQKL------------MR--HTG----PALSAFNAWVLLKGLE-----TLALRV 270 (403)
T ss_pred CCceecCCcCceeEEEEeChHHHHHHHHHH------------HH--HhC----CCCCHHHHHHHHhccC-----cHHHHH
Confidence 9999965321 3888888775442 2210 01 112 1344433333333333 256788
Q ss_pred HHHHHHHHHHHHHHHHc
Q 015729 276 ERHRRLGKATRLAVEAW 292 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~ 292 (401)
++..+++..+.+.|++.
T Consensus 271 ~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 271 RHSNASALRIAEFLEGH 287 (403)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 88899999999999875
No 237
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.91 E-value=4.9e-22 Score=169.56 Aligned_cols=328 Identities=14% Similarity=0.101 Sum_probs=242.5
Q ss_pred CCCCCCcccccCCCcCChHHHHHHHccCcCCCCCc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 4 MYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 4 ~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
+-++.++||--...+.+..+..+++.++.....+. +..++-..|+..|+++-+.++ .++.+++-.|+..++-+
T Consensus 70 lnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED---~ilypscfdANag~fea 146 (417)
T KOG1359|consen 70 LNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED---TILYPSCFDANAGAFEA 146 (417)
T ss_pred eeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc---eEEeccccccchHHHHH
Confidence 45788999988888888888888888876543332 246777789999999987766 67888899999999999
Q ss_pred cCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHH
Q 015729 80 TLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK 158 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~ 158 (401)
++.|.|.|+.....|-|.. -..++++++ ..|.-.++..+.+.-..|.++++-....++.|.+.|+++
T Consensus 147 il~pedAvfSDeLNhASIIdGirLckry~------------h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~e 214 (417)
T KOG1359|consen 147 ILTPEDAVFSDELNHASIIDGIRLCKRYR------------HVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEE 214 (417)
T ss_pred hcChhhhhhccccccchhhhhhHHHhhhc------------cchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHH
Confidence 9999999888887777665 223444322 245556665554332256788888888899999999999
Q ss_pred HHHHhhhcCCCcEEEEecccccCccee---------ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAIDF---------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
|.+++++ ||.++++|++|+.|..-. .. ...+|++.++..|.++|..| |+..+++++..-+++...++
T Consensus 215 i~~La~k--YgaLlfiDecHaTgf~G~tGrGt~E~~~v-m~~vdiinsTLgKAlGga~G-Gyttgp~~li~llrqr~Rpy 290 (417)
T KOG1359|consen 215 ISQLAKK--YGALLFIDECHATGFFGETGRGTAEEFGV-MGDVDIINSTLGKALGGASG-GYTTGPKPLISLLRQRSRPY 290 (417)
T ss_pred HHHHHHh--cCcEEEEeecccceeecCCCCChHHHhCC-CCcceehhhhhhhhhcCCCC-CCccCChhHHHHHHhcCCce
Confidence 9999999 999999999998664321 11 13589999999999976666 99999999988777653322
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeE
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (401)
. |.++.++.-+....++++.+... .+...+.+.+.+++++..+..|+.+.+. +.+++
T Consensus 291 l----------------FSnslppavV~~a~ka~dllm~s--~~~i~~~~a~~qrfr~~me~aGftIsg~-----~hPI~ 347 (417)
T KOG1359|consen 291 L----------------FSNSLPPAVVGMAAKAYDLLMVS--SKEIQSRQANTQRFREFMEAAGFTISGA-----SHPIC 347 (417)
T ss_pred e----------------ecCCCChhhhhhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhcCceecCC-----CCCcc
Confidence 2 13345544444556677776654 4677788899999999998889998764 23455
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
.+-+.+..-+..+++.|+++ ||+|....++. ..-.+|+-..+.+|+||||++++++.++.+..+
T Consensus 348 pv~lGda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 348 PVMLGDARLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred ceecccHHHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 55564433466788888877 99887654432 223499998999999999999999999876543
No 238
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.91 E-value=2e-21 Score=185.76 Aligned_cols=310 Identities=18% Similarity=0.176 Sum_probs=211.8
Q ss_pred ChHHHHHHHccCcCC--CCCc-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---------CCC-CCe
Q 015729 20 IPDQVIRAMNRNNED--YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---------LSP-GDR 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~-~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---------~~~-gd~ 86 (401)
.+|++.+++.+.... +.+. ...+...++.++++++++.+ .++++++|++|++.++... ..+ .++
T Consensus 54 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~ 130 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGYD---KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAI 130 (401)
T ss_pred CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCCC---EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCE
Confidence 367777777764321 2221 13466788999999998753 4899999999999988652 123 356
Q ss_pred EEEEcCCcchHHHHHHHHH--------cC---CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 87 IISFLIGQFSLLWIDQQQR--------LN---FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~--------~g---~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
|+.....|++..+..+... .+ ..+..++.+ |++++++.+++.. +++.++++..+++++|.+.+
T Consensus 131 i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-~~~~avi~E~v~~~~G~~~~ 204 (401)
T TIGR01885 131 IVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHG-PNVCAFIVEPIQGEAGVVVP 204 (401)
T ss_pred EEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcC-CCEEEEEEeCccCCCCCccC
Confidence 6667667776543332221 11 122333222 7899999887543 46788899999999999987
Q ss_pred ----hHHHHHHhhhcCCCcEEEEecccccCc---ce--eccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccC
Q 015729 156 ----LSKVRKLLDEYRHPALFLVDGVSSICA---ID--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTA 225 (401)
Q Consensus 156 ----l~~i~~l~~~~~~~~~li~D~a~~~~~---~~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~ 225 (401)
+++|.++|++ +|+++|+|++|.... .. .+.....+|++++| |.++++ .++|+++.++++.+.+...
T Consensus 205 ~~~~l~~l~~l~~~--~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~~~~~~~ 280 (401)
T TIGR01885 205 DDGYLKKVRELCTK--HNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVMLTIKPG 280 (401)
T ss_pred CHHHHHHHHHHHHH--cCCEEEEechhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHHhhccCC
Confidence 8999999999 999999999985321 11 12233467888765 998654 4579999999887766431
Q ss_pred CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 015729 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (401)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (401)
.. +. .++.++..++++.++++.+.+++ ..++..++.+++++.|++++..+..... ..
T Consensus 281 ~~----------------~~--t~~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~~~~~~~~~--g~ 337 (401)
T TIGR01885 281 EH----------------GS--TYGGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLPKPIITEVR--GR 337 (401)
T ss_pred CC----------------CC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhccCCceeEEe--ec
Confidence 10 11 22345666778888888887643 5567778889999999988544432111 24
Q ss_pred ceeEEEEcCCC---CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 306 DTVTAVIVPSH---INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 306 ~~~~~~~~~~~---~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.+..+.++++ .+..++.+.|.++ ||.+.+. .++.+||++...++++|+++++++|++++
T Consensus 338 g~~~~i~~~~~~~~~~~~~l~~~l~~~-Gv~v~~~----~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 338 GLLNAIVIDESKTGRTAWDLCLKLKEK-GLLAKPT----HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CeeEEEEeccCcchhHHHHHHHHHHhC-CEEEEec----CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 45666666433 2467899999866 9998654 25689999888899999999999998876
No 239
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=6e-22 Score=188.96 Aligned_cols=151 Identities=13% Similarity=0.080 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.++++.|.+. .++++||++|+++++.+++++||+|+++...|.+.. +...+...|+++++++.+
T Consensus 63 ~p~~~~le~~lA~l~g~~~---av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-- 137 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVG---AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-- 137 (433)
T ss_pred ChHHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC--
Confidence 4568899999999999876 688999999999999888999999999998877654 233346689999999865
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++.+++||+|.+.|+++|.++|++ +|+++|+|++++.+..... .+.|+|++++|
T Consensus 138 ---d~~~l~~~i~~----~TklV~~e~~~np~g~v~Di~~I~~la~~--~gi~livD~t~a~~~~~~p-l~~GaD~vv~S 207 (433)
T PRK08134 138 ---DIDGWRAAIRP----NTRLLFGETLGNPGLEVLDIPTVAAIAHE--AGVPLLVDSTFTTPYLLRP-FEHGADLVYHS 207 (433)
T ss_pred ---CHHHHHHhcCC----CCeEEEEECCCcccCcccCHHHHHHHHHH--cCCEEEEECCCcccccCCc-hhcCCCEEEec
Confidence 79999999974 56999999999999999999999999999 9999999999987765433 36799999999
Q ss_pred CCCcccCC
Q 015729 199 SQKALSLP 206 (401)
Q Consensus 199 ~~K~l~g~ 206 (401)
.||+++|+
T Consensus 208 ~tK~l~g~ 215 (433)
T PRK08134 208 ATKFLGGH 215 (433)
T ss_pred cccccCCC
Confidence 99998644
No 240
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=1.3e-21 Score=200.65 Aligned_cols=316 Identities=16% Similarity=0.085 Sum_probs=228.0
Q ss_pred CcCChHHHHHHHccCcCCC-----CCcc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCC--C
Q 015729 17 PVHIPDQVIRAMNRNNEDY-----RSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSP--G 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~-----~~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~--g 84 (401)
|...|+.+.+.+.+....+ ++++ ..+.+.+++.+++++.|.+..+ +.++.++|++.+.++.+. +++ +
T Consensus 87 ~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~an-aSl~d~aTAa~ea~~~a~~~~~~~~ 165 (954)
T PRK05367 87 GTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIAN-ASLLDEATAAAEAMALAKRVSKSKS 165 (954)
T ss_pred CCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhh-ccccccHHHHHHHHHHhhhhccCCC
Confidence 4555555546666643211 2222 2344678999999999998654 889999999999877664 445 4
Q ss_pred CeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHH
Q 015729 85 DRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 85 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
|+|++++..|++.. +...++..|++++.++.+.+ .+ + +++ ..++.+..|.+|.+.|+++|.++
T Consensus 166 ~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~------~----~~~-~~vlvq~p~~~G~i~d~~~i~~~ 230 (954)
T PRK05367 166 NRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD------H----DDV-FGVLLQYPGTSGEVRDYTALIAA 230 (954)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC------c----ccE-EEEEEecCCCCeeeccHHHHHHH
Confidence 89999999998876 56677889999999987542 11 1 234 33456667889999999999999
Q ss_pred hhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCc-----ccCCCcceEEEecHHHHHHhccCCCCc--------
Q 015729 163 LDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKA-----LSLPTGMGIVCASPKALEASKTAKSVR-------- 229 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~-----l~g~~g~G~l~~~~~~~~~~~~~~~~~-------- 229 (401)
||+ +|+++++|+.+.......+..++|+|++++++||| + |+++.|++++++++.+.+++.....
T Consensus 231 ah~--~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~-GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~ 307 (954)
T PRK05367 231 AHA--RGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGF-GGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNP 307 (954)
T ss_pred HHH--cCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCC-CCCCEEEEEECHHHHhhCCCCeeeeecccCCCc
Confidence 999 99999999977444444577889999999999998 4 3457999999999888877554310
Q ss_pred -c--ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHH-----HHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 015729 230 -V--FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAAL-----DLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (401)
Q Consensus 230 -~--~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al-----~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (401)
+ ..+..++..+++.++ +++....++.+++ .++...|++++.++...++.++++.|++.|+++...
T Consensus 308 ~~~lalqtReqhiRrekaT-----sNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~-- 380 (954)
T PRK05367 308 ALRLALQTREQHIRREKAT-----SNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHD-- 380 (954)
T ss_pred ccccccccccccccccccc-----cccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCC--
Confidence 0 012233445667775 4444322223222 445677899999999999999999998888887643
Q ss_pred ccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
. ... .+.+.++ .+..++.++|.++ ||.++.. .++.+|+++..+.|++|||.+++++.
T Consensus 381 ~-~f~-~~~~~~~--~~~~~i~~~l~~~-gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 381 S-FFD-TLTVEVG--GDAAAVLARALAA-GINLRRV----DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred C-CCC-eEEEeCC--CCHHHHHHHHHHC-Cceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 1 222 4456663 3688999999876 8887422 24579999999999999999999996
No 241
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.91 E-value=1.2e-21 Score=186.21 Aligned_cols=216 Identities=15% Similarity=0.096 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.+++++|.+. .++++||+.|+..++.+++++||+|+++.+.|.... +...++..|++++.++.+
T Consensus 64 ~p~~~~le~~lA~l~g~~~---~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 138 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEA---AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-- 138 (403)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC--
Confidence 4567899999999999865 567778999999998888999999999988654433 234456789999988764
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+...... ..++|++++|
T Consensus 139 ---d~~~l~~~i~~----~tklV~le~p~NPtG~~~di~~I~~la~~--~gi~lIvD~a~a~~~~~~~l-~~g~Di~v~S 208 (403)
T PRK07503 139 ---DPAALKAAISD----KTRMVYFETPANPNMRLVDIAAVAEIAHG--AGAKVVVDNTYCTPYLQRPL-ELGADLVVHS 208 (403)
T ss_pred ---CHHHHHHhcCc----cCcEEEEeCCCCCCCeeeCHHHHHHHHHH--cCCEEEEECCCcccccCCch-hhCCCEEEcc
Confidence 79999998874 56999999999999999999999999999 99999999999865332222 3578999999
Q ss_pred CCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.+|+++++.+ .|+++.++++.+++..... .. .+....+...++.+...++ .+....+
T Consensus 209 ~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~-----------~~-----~~g~~~s~~~a~l~l~~L~-----tl~~r~~ 267 (403)
T PRK07503 209 ATKYLGGHGDITAGLVVGGKALADRIRLEGL-----------KD-----MTGAVMSPFDAFLLMRGLK-----TLALRMD 267 (403)
T ss_pred ccccccCCCceeEEEEEcCHHHHHHHHhhhH-----------Hh-----CcCCCCCHHHHHHHHcCcc-----hHHHHHH
Confidence 9999975432 5888888888776652100 00 0112344432222222222 2455667
Q ss_pred HHHHHHHHHHHHHHHc
Q 015729 277 RHRRLGKATRLAVEAW 292 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~ 292 (401)
+..++++.+.+.|++.
T Consensus 268 ~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 268 RHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 7778899999999875
No 242
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.91 E-value=1e-21 Score=184.96 Aligned_cols=302 Identities=18% Similarity=0.185 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC-C
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-G 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~ 118 (401)
.....++++.+++++|.+. ++.++|||.|+.+++.++ +++||+|+++...+++.. ......|++++++++++ .
T Consensus 24 g~~~~~fE~~~a~~~g~~~---~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~--~ai~~~G~~pv~~Di~~~~ 98 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKY---AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATA--SAILWAGAEPVFVDIDPET 98 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSE---EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHH--HHHHHTT-EEEEE-BETTT
T ss_pred CHHHHHHHHHHHHHhCCCe---EEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHH--HHHHHhccEEEEEeccCCc
Confidence 5778899999999999776 889999999999999774 689999999988766553 56777999999999985 5
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceecc--CcccceEEE
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRM--DEWGIDVAL 196 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~di~~ 196 (401)
..+|++.+++++++ ++++|+++|. .|...++++|.++|++ +|++||.|++|+.|+..-+. ... -|+.+
T Consensus 99 ~~id~~~~~~~i~~----~t~ai~~~h~---~G~~~d~~~i~~~~~~--~~i~lIeD~a~a~g~~~~g~~~G~~-gd~~~ 168 (363)
T PF01041_consen 99 LNIDPEALEKAITP----KTKAILVVHL---FGNPADMDAIRAIARK--HGIPLIEDAAQAFGARYKGRPVGSF-GDIAI 168 (363)
T ss_dssp SSB-HHHHHHHHHT----TEEEEEEE-G---GGB---HHHHHHHHHH--TT-EEEEE-TTTTT-EETTEETTSS-SSEEE
T ss_pred CCcCHHHHHHHhcc----CccEEEEecC---CCCcccHHHHHHHHHH--cCCcEEEccccccCceeCCEeccCC-CCceE
Confidence 68999999999985 5699999974 6888999999999999 99999999999998754221 112 26666
Q ss_pred ec--CCCcccCCCcceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcC--CCCCCCCcHHHHHHHHHHHHHHHHhcH
Q 015729 197 TG--SQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLG--TFWPYTPSIQLLYGLRAALDLIFEEGL 271 (401)
Q Consensus 197 ~s--~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~a~~~al~~~~~~g~ 271 (401)
+| ..|.+.++.| |++++++ ++.+++......+.... ....+... ..+.+-.+ .+.+|+...+-..+
T Consensus 169 fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~g~n~rm~-----~~~AAigl~QL~~L 239 (363)
T PF01041_consen 169 FSFHPTKIITTGEG-GAVVTNDPELAERARALRNHGRSRD---AFRRYRHELPPGYNFRMS-----ELQAAIGLAQLKRL 239 (363)
T ss_dssp EESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEETS---ECSTTEESSSS--B-B-B-----HHHHHHHHHHHHTH
T ss_pred ecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccCcCcc---ccccccccccCCcccccH-----HHHHHHHHHHHHHh
Confidence 66 5699976776 7887765 44555543322111000 00000000 00011122 33455554444457
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-CCccccCCCc-c-CCceeEEEEcCCC--CCHHHHHHHHHhhCCeEEccCCC-CC----
Q 015729 272 ENVIERHRRLGKATRLAVEAW-GLKNCTQKEE-W-FSDTVTAVIVPSH--INSSEIVRRAWQRYNLSLGLGLN-KV---- 341 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~l~~~L~~~~~i~v~~g~~-~~---- 341 (401)
+...++.+++.+.+.+.|.+. ++......+. . ..+..+.+.+++. .+.+++.+.|.++ ||.+...+. +.
T Consensus 240 ~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~-GI~~~~~~~~pl~~~~ 318 (363)
T PF01041_consen 240 DEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRAR-GIETRPHYPKPLHRQP 318 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHT-TBEEBCSTSSCGGGSG
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHC-CCcccccccCchhhhH
Confidence 788889999999999999987 5544332222 1 3455666777543 3678899999877 999887762 11
Q ss_pred ---------C----------CcEEEEeecccCCHHHHHHHHHHHH
Q 015729 342 ---------A----------GKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 342 ---------~----------~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
. ...+.+.++..++++|+++++++|+
T Consensus 319 ~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 319 VYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 0 1338888888899999999999885
No 243
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.90 E-value=9.6e-22 Score=185.28 Aligned_cols=288 Identities=13% Similarity=0.081 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......+|+++++++.|.+. .+++++|+.|+.+++ +++++||+|+++++.|.+.. +...+...|++++.++..
T Consensus 48 ~~p~~~~Le~~la~l~g~~~---al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~- 122 (380)
T PRK06176 48 GNPTRFALEELIADLEGGVK---GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTS- 122 (380)
T ss_pred CChhHHHHHHHHHHHhCCCC---EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCC-
Confidence 34557899999999999765 566788899998665 57899999999998776654 445667789988888643
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+.... ....++|++++
T Consensus 123 ----d~e~l~~ai~~----~t~lV~lesP~Nptg~~~di~~I~~la~~--~gi~vivD~t~a~~~~~~-p~~~gaDivv~ 191 (380)
T PRK06176 123 ----DLSQIKKAIKP----NTKALYLETPSNPLLKITDLAQCASVAKD--HGLLTIVDNTFATPYYQN-PLLLGADIVVH 191 (380)
T ss_pred ----CHHHHHHhcCc----CceEEEEECCCCCCceecCHHHHHHHHHH--cCCEEEEECCccccccCC-ccccCCCEEEe
Confidence 79999998874 56999999999999999999999999999 999999999988654322 23568999999
Q ss_pred cCCCcccCCCc--ceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.+|+++|+.. .|+++.++ ++.+++... ... .|. ..++.....+...+ ..+..+
T Consensus 192 S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~-------------~~~-~G~----~~~~~~~~l~~~gl-----~tl~~R 248 (380)
T PRK06176 192 SGTKYLGGHSDVVAGLVTTNNEALAQEIAFF-------------QNA-IGG----VLGPQDSWLLQRGI-----KTLGLR 248 (380)
T ss_pred cCceeccCCccceeeEEEecHHHHHHHHHHH-------------HHH-hcC----CCCHHHHHHHHhcc-----CcHHHH
Confidence 99999976542 37777754 444433211 000 121 12221111111111 124567
Q ss_pred HHHHHHHHHHHHHHHHHc-CCc-----cccCCCc--------cCCceeEEEEcCCCCCHHHHHHHHHhhCCe---EEccC
Q 015729 275 IERHRRLGKATRLAVEAW-GLK-----NCTQKEE--------WFSDTVTAVIVPSHINSSEIVRRAWQRYNL---SLGLG 337 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~-----~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i---~v~~g 337 (401)
+++..+++..+.+.|++. .+. -+...+. ...+.++.|++. + .++. ..+.++..+ .+..|
T Consensus 249 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~-~--~~~~-~~f~~~l~~~~~~~s~G 324 (380)
T PRK06176 249 MEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLK-N--DSEA-VAFVESLKLFILGESLG 324 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-C--HHHH-HHHHHcCCcceEccCCC
Confidence 777788888888888874 221 1111000 124568889984 2 2222 233333222 22222
Q ss_pred CC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 338 LN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 338 ~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
.. ...++.+|+|+. -||.|.+++-|+.+|+.+|
T Consensus 325 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dli~dl~~Al~~~~ 380 (380)
T PRK06176 325 GVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVG----IEHEQDLLEDLEQAFAKIG 380 (380)
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEec----cCCHHHHHHHHHHHHhhcC
Confidence 11 012356999864 4788888888888887654
No 244
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.90 E-value=3e-21 Score=183.90 Aligned_cols=287 Identities=14% Similarity=0.099 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C------CCCCeEEEEcCCcchHHHHHHHHHcCC----
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L------SPGDRIISFLIGQFSLLWIDQQQRLNF---- 108 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~------~~gd~vl~~~~~~~~~~~~~~~~~~g~---- 108 (401)
.+...++.++|+++.+.+ .+.++++|++|++.++... . ...++|+..+.+||+.....+ ...+.
T Consensus 76 ~~~~~~la~~L~~~~~~~---~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~-~~~~~~~~~ 151 (397)
T TIGR03246 76 NEPVLRLAKKLVDATFAD---KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTV-SVGGQPKYS 151 (397)
T ss_pred CHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHH-HhcCCcccc
Confidence 345678999999987543 4999999999999988542 1 123578888888888753222 21221
Q ss_pred --------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc----chHHHHHHhhhcCCCcEEEEec
Q 015729 109 --------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN----NLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 109 --------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~----~l~~i~~l~~~~~~~~~li~D~ 176 (401)
.+..++.+ |++++++.++ +++++|+++.++++.|... .+++|.++|++ +|+++|+|+
T Consensus 152 ~~~~~~~~~~~~~~~~-----d~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~--~g~llI~DE 220 (397)
T TIGR03246 152 QGFAPLPGGIKHAPYN-----DLAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDR--HNALLIFDE 220 (397)
T ss_pred cCCCCCCCceEEeCCC-----CHHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEec
Confidence 12223222 7899999886 3679999998888888664 28899999999 999999999
Q ss_pred ccccCcc---eeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 177 VSSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 177 a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
+|..... .+... ...+|++++ +|.++++.++|++++++++.+.+..... +. .++.
T Consensus 221 v~tG~Gr~G~~~a~~~~gv~pDi~t~--~K~lggG~pigav~~~~~i~~~~~~~~~----------------~~--t~~~ 280 (397)
T TIGR03246 221 VQTGVGRTGELYAYMHYGVTPDILTS--AKALGGGFPIGAMLTTTEIAAHLKVGTH----------------GT--TYGG 280 (397)
T ss_pred hhhcCCccccchhhhhcCCCCCEEEe--ehhhhCCcceeEEEEcHHHHHhccCCCc----------------CC--CCCC
Confidence 9842211 11111 234677754 5999766678999999998776643210 11 2234
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC--CccccCCCccCCceeEEEEcCCC--CCHHHHHHHHH
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEEWFSDTVTAVIVPSH--INSSEIVRRAW 327 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~ 327 (401)
++..++++.++++.+.+ ++..++++++.+++++.|++++ +.+.... ...+.++.+.+.+. .....+++.|.
T Consensus 281 ~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~v--rg~G~~~~i~~~~~~~~~~~~~~~~l~ 355 (397)
T TIGR03246 281 NPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEI--RGKGLLIGAVLTEAYQGKAKQFVNAAA 355 (397)
T ss_pred CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEee--ecCceEEEEEEcCchhhHHHHHHHHHH
Confidence 55667778888887654 3478888899999999998864 3322211 12345566665322 23567888888
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 328 ~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
++ |+.+.+. ..+++|+++...+|++|++++++++++++.+
T Consensus 356 ~~-Gv~~~~~----g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 356 EE-GVIALIA----GPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred HC-CeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 76 8887643 2368999888889999999999999998875
No 245
>PRK04311 selenocysteine synthase; Provisional
Probab=99.90 E-value=3e-21 Score=184.45 Aligned_cols=327 Identities=16% Similarity=0.082 Sum_probs=217.2
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCCCC----Cc---cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYR----SP---AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~~---~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
.+..|..-.|-+++++++++++.+....+. .. ...+.+.++++.+++++|.+. .++++|++.|+..++.+
T Consensus 85 tg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~---a~vv~sgtaAl~l~l~~ 161 (464)
T PRK04311 85 TGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAED---ALVVNNNAAAVLLALNA 161 (464)
T ss_pred CccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHH
Confidence 345555555778899999999977543321 00 113446799999999999875 67888899999988755
Q ss_pred cCCCCCeEEEEcCCcch----HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCC--cc--
Q 015729 80 TLSPGDRIISFLIGQFS----LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETA--TG-- 151 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~----~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~--tG-- 151 (401)
+.+||+|+++..+++. ..+....+..|+++++++.+. ..+++++++++++ ++++++++|++|+ +|
T Consensus 162 -l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~~----~TklV~~vh~sN~~i~G~~ 234 (464)
T PRK04311 162 -LAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAINE----NTALLLKVHTSNYRIEGFT 234 (464)
T ss_pred -hCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcCc----cCeEEEEEcCCCccccccC
Confidence 6899999998765552 223345677899999987643 3579999999974 5699999999997 34
Q ss_pred cccchHHHHHHhhhcCCCcEEEEecccccC---------cce--eccCcccceEEEecCCCcccCCCcceEEEecHHHHH
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSIC---------AID--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~~---------~~~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~ 220 (401)
...|+++|.++|++ +|+++++|++++.. ..+ .+..+.|+|++++|++|+++|+ ..|++++++++++
T Consensus 235 ~~~dl~eI~~lak~--~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~~li~ 311 (464)
T PRK04311 235 KEVSLAELAALGKE--HGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGKKELIA 311 (464)
T ss_pred CcCCHHHHHHHHHH--cCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEcHHHHH
Confidence 56799999999999 99999999854321 111 1223478999999999999766 4799999999988
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-----------HHHHHHHHHHHHHHHHHHH
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-----------LENVIERHRRLGKATRLAV 289 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-----------~~~~~~~~~~~~~~l~~~L 289 (401)
++..... .+.+. ..-..++++.+.+..+.... +....++.+++++.+.+.|
T Consensus 312 ~l~~~~~----------~r~lr--------~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L 373 (464)
T PRK04311 312 RLKKHPL----------KRALR--------VDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAAL 373 (464)
T ss_pred HHhhchh----------HHHHh--------cchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHH
Confidence 7663211 01111 11133456666666443211 2223466777888888888
Q ss_pred HHc---CC--ccccC--------CCccCCceeEEEEc-CCCCCHHHHHHHHHhh-CCeEEccCCCCCCCcEEEEeecccC
Q 015729 290 EAW---GL--KNCTQ--------KEEWFSDTVTAVIV-PSHINSSEIVRRAWQR-YNLSLGLGLNKVAGKVFRIGHLGHL 354 (401)
Q Consensus 290 ~~~---g~--~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~-~~i~v~~g~~~~~~~~~Ri~~~~~~ 354 (401)
... ++ .+... .+.... .-..+.+ +.+.+..++.++|++. .-|..+ ...+.+.+-+- ++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~gggs~p~~~~-~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r-----~~~~~~~ld~r-~~ 446 (464)
T PRK04311 374 KAALGAAFAVEVVPSFSQVGGGSLPVDRL-PSAAVTLTPKDRSLEALAARLRLLPPPVIGR-----IEDGRLLLDLR-TL 446 (464)
T ss_pred HhccCCCeeEEEEEccCccCCCCCcCCCC-CeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE-----EECCEEEEEeC-cC
Confidence 764 22 22221 111111 2223333 2456788999999753 124433 22455666443 47
Q ss_pred CHHHHHHHHHHHHHHHH
Q 015729 355 NELQLLGCLAGVEMILK 371 (401)
Q Consensus 355 ~~~di~~~~~~i~~~l~ 371 (401)
.++|++.+++++++++.
T Consensus 447 ~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 447 EEEDEERLAAALLEALN 463 (464)
T ss_pred CHHHHHHHHHHHHHHhh
Confidence 88999999999988764
No 246
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=5.4e-22 Score=187.83 Aligned_cols=286 Identities=16% Similarity=0.092 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.+++++|.+. .++++||++|+..++.+++++||+|+++.+.|.+.. +.......|++++.++.
T Consensus 60 ~p~~~~Le~~lA~~~g~~~---~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~--- 133 (388)
T PRK07811 60 NPTRTALEEQLAALEGGAY---GRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL--- 133 (388)
T ss_pred CccHHHHHHHHHHHhCCCc---eEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC---
Confidence 4557899999999999876 355567899999999999999999999998776543 23334446888777764
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
.|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+..... ...++|++++|
T Consensus 134 --~d~e~l~~~i~~----~tklV~ie~p~NPtg~~~dl~~I~~la~~--~gi~lIvD~a~a~~~~~~p-~~~gaDivv~S 204 (388)
T PRK07811 134 --SDLDAVRAAITP----RTKLIWVETPTNPLLSITDIAALAELAHD--AGAKVVVDNTFASPYLQQP-LALGADVVVHS 204 (388)
T ss_pred --CCHHHHHHhcCc----CCeEEEEECCCCCcceecCHHHHHHHHHH--cCCEEEEECCCCccccCCc-hhhCCcEEEec
Confidence 389999999874 56999999999999999999999999999 9999999999887643222 23578999999
Q ss_pred CCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++|+.+ .|+++++ +++.+++... .. ..| ...+... +..++..+. .+..++
T Consensus 205 ~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~-------------~~-~~g----~~~s~~~---a~l~~~~L~--tl~~R~ 261 (388)
T PRK07811 205 TTKYIGGHSDVVGGALVTNDEELDEAFAFL-------------QN-GAG----AVPGPFD---AYLTLRGLK--TLAVRM 261 (388)
T ss_pred CceeecCCCCcEEEEEEECCHHHHHHHHHH-------------HH-hcC----CCCCHHH---HHHHHhccC--cHHHHH
Confidence 9999976543 4888776 4444433311 00 001 1233322 112222222 256677
Q ss_pred HHHHHHHHHHHHHHHHc-CCcc-ccCC----Cc--------cCCceeEEEEcCCCCCHHHHHHHHHhhCCe---EEccCC
Q 015729 276 ERHRRLGKATRLAVEAW-GLKN-CTQK----EE--------WFSDTVTAVIVPSHINSSEIVRRAWQRYNL---SLGLGL 338 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~~-~~~~----~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i---~v~~g~ 338 (401)
++..++++.+.+.|++. ++.. ..+. +. ...+.++.|+++. +.++. ..+.++-.+ .+..|.
T Consensus 262 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~--~~~~~-~~f~~~l~~~~~~~s~G~ 338 (388)
T PRK07811 262 DRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG--GEEAA-RDFCARTKVFTLAESLGG 338 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC--CHHHH-HHHHHhCCcceeeccCCC
Confidence 88889999999999875 4321 1111 00 1235688899842 22332 233333222 222221
Q ss_pred C--------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 339 N--------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 339 ~--------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
. ...++.+|||+.. ||.+.+++.|+.+|+
T Consensus 339 ~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 339 VESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred CcceEeCCcccCcccCCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 0 0113579998654 677777777777664
No 247
>PRK07505 hypothetical protein; Provisional
Probab=99.90 E-value=4.1e-21 Score=183.69 Aligned_cols=323 Identities=12% Similarity=0.126 Sum_probs=201.5
Q ss_pred CCcccccCCCc----CChHHHHHHHccCcCC-----CCC---ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHH
Q 015729 8 GKNHLFVPGPV----HIPDQVIRAMNRNNED-----YRS---PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (401)
Q Consensus 8 ~~~~~~~~~p~----~~~~~v~~a~~~~~~~-----~~~---~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~ 75 (401)
|+.|++..+-. .-+|+|++++.++... +.. ....+...++++.|+++++. . .++.++|++|++.
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~---~~~~~sG~~a~~~ 120 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-S---VLTFTSCSAAHLG 120 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-C---EEEECChHHHHHH
Confidence 45555554322 3367777776664321 111 12345678999999999986 2 5555677888887
Q ss_pred HHhc----cCCCCC-eEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCC
Q 015729 76 ALTN----TLSPGD-RIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETA 149 (401)
Q Consensus 76 ~~~~----~~~~gd-~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~ 149 (401)
++.. .+.+++ .+++.+..+|+.. ........+.+++.++.+ |++++++++++ ++++++++.|+||
T Consensus 121 ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~~~~----~~~~~vl~~p~~~ 191 (402)
T PRK07505 121 ILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHN-----DLDALEDICKT----NKTVAYVADGVYS 191 (402)
T ss_pred HHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCC-----CHHHHHHHHhc----CCCEEEEEecccc
Confidence 6632 223333 3666665444432 111122235567777653 89999998864 3478899999999
Q ss_pred cccccchHHHHHHhhhcCCCcEEEEecccccCcc-----eec---cC--cccceEEEecCCCcccCCCcceEEEe-cHHH
Q 015729 150 TGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFR---MD--EWGIDVALTGSQKALSLPTGMGIVCA-SPKA 218 (401)
Q Consensus 150 tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~---~~--~~~~di~~~s~~K~l~g~~g~G~l~~-~~~~ 218 (401)
+|.+.++++|.++|++ +|+++|+|++|+.+.+ .+. .. .....+++.|.+|.++ ..| |++.. +++.
T Consensus 192 ~G~~~~~~~i~~l~~~--~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~-~~G-g~~~~~~~~~ 267 (402)
T PRK07505 192 MGGIAPVKELLRLQEK--YGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFG-ASG-GVIMLGDAEQ 267 (402)
T ss_pred cCCcCCHHHHHHHHHH--cCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhh-ccC-eEEEeCCHHH
Confidence 9999999999999999 9999999999864211 111 11 1234577789999985 444 77764 6676
Q ss_pred HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 015729 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCT 298 (401)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 298 (401)
.+.+..... +..+..+++...+++..++++...++.+.+..++..++.+.+...+... .
T Consensus 268 ~~~~~~~~~----------------~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~-- 326 (402)
T PRK07505 268 IELILRYAG----------------PLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE---Q-- 326 (402)
T ss_pred HHHHHHhCC----------------CceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc---C--
Confidence 665543211 1112334666677778888876665555555555544444433322111 1
Q ss_pred CCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~---~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
. .... .+..+.+++..+..++.+.|.++ ||.+++...+. ...++||++...+|++|+++++++|++++++
T Consensus 327 -~-g~~~-~i~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 327 -S-GSFL-PIRLIYIGDEDTAIKAAKQLLDR-GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred -C-CCCC-CEEEEEeCCHHHHHHHHHHHHHC-CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 1 1111 22333333222356788999876 99998763321 1258999999889999999999999998864
No 248
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=1.9e-21 Score=182.28 Aligned_cols=291 Identities=15% Similarity=0.125 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
..+....+++.++.+.+.+. .+++++|++|+..++.+++++||+|+++++.|++.. +...++..|+++..++.+
T Consensus 62 gnPt~~~Le~~la~le~~~~---~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~- 137 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAG---TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE- 137 (395)
T ss_pred CChHHHHHHHHHHHHhCCCC---EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-
Confidence 34566788999988877554 566777899999999999999999999999988875 235678899999988643
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
+.+.+++++++ ++|+|++++|+||++.+.|+++|.++|++ +|+++++|++++.+ ..+...++|+|+++.
T Consensus 138 ----~~e~l~~al~~----~TklV~lesPsNP~l~v~dl~~I~~la~~--~g~~vvVD~t~a~p-~~~~pl~~GaDivv~ 206 (395)
T PRK05967 138 ----IGAGIAKLMRP----NTKVVHTEAPGSNTFEMQDIPAIAEAAHR--HGAIVMMDNTWATP-LYFRPLDFGVDISIH 206 (395)
T ss_pred ----CHHHHHHhcCc----CceEEEEECCCCCCCcHHHHHHHHHHHHH--hCCEEEEECCccCc-eecChhHcCCCEEEE
Confidence 45788988874 56999999999999999999999999999 99999999998754 334556689999999
Q ss_pred cCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 198 GSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
|.+|+++|... .|+++.+++.++++... ....|. +.++.. ++..++-++ -+.-++
T Consensus 207 S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~--------------~~~~G~----~~~p~d---a~l~~rgl~--Tl~lR~ 263 (395)
T PRK05967 207 AATKYPSGHSDILLGTVSANEKCWPQLLEA--------------HGTLGL----CAGPDD---TYQILRGLR--TMGIRL 263 (395)
T ss_pred ecccccCCCCCeeEEEEEcCHHHHHHHHHH--------------HHHcCC----CCCHHH---HHHHHcCcc--cHHHHH
Confidence 99999876443 37777777765544311 011132 344432 222222111 256688
Q ss_pred HHHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCceeEEEEcCCCC--CHHHHHHHHHhhCCe---EEcc
Q 015729 276 ERHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHI--NSSEIVRRAWQRYNL---SLGL 336 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~--~~~~l~~~L~~~~~i---~v~~ 336 (401)
++..+++..+.+.|++. .++ +..+ .+. ...+.++.|.++.+. +.+. +.++.++-.+ .+..
T Consensus 264 ~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~-~~~f~~~l~l~~~~~sl 342 (395)
T PRK05967 264 EHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAK-AHAFLDALEIFGLGYSW 342 (395)
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHH-HHHHHHhCCcceEccCC
Confidence 88899999999999874 331 1111 110 123568889985331 2222 2333333232 2222
Q ss_pred CCC-----------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 337 GLN-----------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 337 g~~-----------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
|.. ...++.+|||+.. ||.|.+++-|+.+|+.+
T Consensus 343 G~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 343 GGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFAAA 392 (395)
T ss_pred CCcceeeeeCCCChhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 211 0123569998654 67777777777777654
No 249
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.90 E-value=3.7e-21 Score=183.96 Aligned_cols=326 Identities=14% Similarity=0.091 Sum_probs=208.0
Q ss_pred CCCCCCC--cccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc
Q 015729 3 YMYAPGK--NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (401)
Q Consensus 3 ~~~~~~~--~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 80 (401)
|.++.++ +.+++-++..+.+++.+.+.+... .......+...++.+++++..+.+ .++++++|++|++.++...
T Consensus 42 ~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~sGseA~e~a~kla 117 (403)
T PRK05093 42 YIDFAGGIAVTALGHCHPALVKALKEQGEKLWH-ISNVFTNEPALRLAKKLIDATFAE---RVFFANSGAEANEAAFKLA 117 (403)
T ss_pred EEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc-ccCccCCHHHHHHHHHHHhhCCCC---EEEEeCchHHHHHHHHHHH
Confidence 3344443 333343555555555555544221 111111233458888888876542 4899999999999988532
Q ss_pred --C------CCCCeEEEEcCCcchHHHHHHHH------HcC-----CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 81 --L------SPGDRIISFLIGQFSLLWIDQQQ------RLN-----FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 81 --~------~~gd~vl~~~~~~~~~~~~~~~~------~~g-----~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
. ...++|+..+.+||+..+..+.. ..+ .+++.++.+ |++++++.+. +++++|
T Consensus 118 r~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~----~~~aai 188 (403)
T PRK05093 118 RRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVID----DHTCAV 188 (403)
T ss_pred HHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhc----CCeEEE
Confidence 1 12457888888888875422111 001 122333222 7899999886 357888
Q ss_pred EEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---eec--cCcccceEEEecCCCcccCCCcceEE
Q 015729 142 CIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFR--MDEWGIDVALTGSQKALSLPTGMGIV 212 (401)
Q Consensus 142 ~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~--~~~~~~di~~~s~~K~l~g~~g~G~l 212 (401)
+++.++++.|...+ +++|.++|++ +|+++|+|++|+.... .+. .....+|+. |.+|.++++.++|++
T Consensus 189 iiep~~~~gg~~~~~~~~l~~l~~l~~~--~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--s~sK~l~~G~rig~v 264 (403)
T PRK05093 189 VVEPIQGEGGVIPATPEFLQGLRELCDQ--HNALLIFDEVQTGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPIGAM 264 (403)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCCCccchhhhhcCCCCCEE--EecccccCCcceEEE
Confidence 88855544455433 8899999999 9999999999873211 111 122236655 456999766668999
Q ss_pred EecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Q 015729 213 CASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (401)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (401)
+.++++.+.+..... + ..++.++..++++.++++.+... +..++++++.+++.+.|+++
T Consensus 265 v~~~~i~~~l~~~~~----------------~--~t~~~~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~~ 323 (403)
T PRK05093 265 LTTAEIASHFKVGTH----------------G--STYGGNPLACAVAEAVFDIINTP---EVLEGVKARRQRFVDGLQKI 323 (403)
T ss_pred EEcHHHHhhcCCCCC----------------C--CCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHH
Confidence 999998777753211 1 12234555667777888776543 45678888999999999886
Q ss_pred CC--ccccCCCccCCceeEEEEcCCCC--CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 293 GL--KNCTQKEEWFSDTVTAVIVPSHI--NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 293 g~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
+. .+... ....+.++++.++.+. +..+++..|.++ ||.+.++ ..+++|+++...++++++++++++|++
T Consensus 324 ~~~~~~~~~--~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~----g~~~lRl~~~~~~~~~~i~~~~~~l~~ 396 (403)
T PRK05093 324 NQKYGVFSE--IRGMGLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVA----GPDVLRFAPSLVIEEADIDEGLARFEK 396 (403)
T ss_pred HhhCCCeEe--EeeCceEEEEEecCcchhHHHHHHHHHHHC-CeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 32 22211 1123567778775432 456888888876 9988753 236899987777899999999999999
Q ss_pred HHHhc
Q 015729 369 ILKDV 373 (401)
Q Consensus 369 ~l~~~ 373 (401)
+++++
T Consensus 397 ~l~~~ 401 (403)
T PRK05093 397 AVAKV 401 (403)
T ss_pred HHHHh
Confidence 88653
No 250
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.90 E-value=1.1e-20 Score=181.00 Aligned_cols=306 Identities=18% Similarity=0.205 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---------CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEE
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---------LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDV 112 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---------~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 112 (401)
....++++.+++++|.+. +++++|||+|+..++.++ +++||+|+++.++|.+.. ......|++++.
T Consensus 63 ~~~~~fe~~lA~~~g~~~---~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~--~~v~~~G~~pv~ 137 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRY---ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTV--NPIIQNGLVPVF 137 (438)
T ss_pred hhHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHH--HHHHHcCCEEEE
Confidence 447799999999999864 888999999999887653 589999999999877664 345668999999
Q ss_pred EeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec--cCc
Q 015729 113 VESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR--MDE 189 (401)
Q Consensus 113 v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~--~~~ 189 (401)
++++. .+.+|++.++++++. ++++|++++ ++|...++++|.++|++ +|++||+|++|+.|+..-+ ...
T Consensus 138 vdvd~~~~~id~~~le~~i~~----~tkaVi~~~---~~G~p~dl~~I~~la~~--~gi~vIeDaa~a~G~~~~g~~~G~ 208 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSP----KTKAIMIAH---TLGNPFDLAAVKAFCDK--HNLWLIEDNCDALGSTYDGRMTGT 208 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCc----CCeEEEEeC---CCCChhhHHHHHHHHHH--CCCEEEEECccchhhhcCCeeeec
Confidence 99874 567899999998863 669999987 46788899999999999 9999999999999876533 122
Q ss_pred ccceEEEec--CCCcccCCCcceEEEecHHHHH-HhccCCCCccc--------------c--chHH----HHHHh---hc
Q 015729 190 WGIDVALTG--SQKALSLPTGMGIVCASPKALE-ASKTAKSVRVF--------------F--DWKD----YIKFY---NL 243 (401)
Q Consensus 190 ~~~di~~~s--~~K~l~g~~g~G~l~~~~~~~~-~~~~~~~~~~~--------------~--~~~~----~~~~~---~~ 243 (401)
.| |+.++| ..|.+.++.| |+++++++.+. ++......+.- + .... +...+ ..
T Consensus 209 ~g-d~~~fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (438)
T PRK15407 209 FG-DIATLSFYPAHHITMGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHL 286 (438)
T ss_pred cC-ceEEEeCCCCCCccccCc-eEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccc
Confidence 23 666555 4577876776 88887765533 22221110000 0 0000 00000 01
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-C-Ccccc-CCCccCCceeEEEEcCC--CCC
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G-LKNCT-QKEEWFSDTVTAVIVPS--HIN 318 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~-~~~~~~~~~~~~~~~~~--~~~ 318 (401)
|. ....+ -+.+|+...+-..++...++.+++++++.+.|.+. + +.+.. +.....++..+.+.+++ +.+
T Consensus 287 G~--n~rms-----el~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 359 (438)
T PRK15407 287 GY--NLKIT-----DMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFT 359 (438)
T ss_pred cc--ccCcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCC
Confidence 11 11122 34555555444456788899999999999999875 3 22221 11222233344555543 346
Q ss_pred HHHHHHHHHhhCCeEEccCCC-C-----------C------------CCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLN-K-----------V------------AGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~-~-----------~------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
..++.+.|.++ ||.++..+. + . ....+.+.++..++++|+++++++|+++++
T Consensus 360 Rd~l~~~L~~~-GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 360 RVELVKYLEEN-KIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HHHHHHHHHHC-CCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 78999999876 887654331 0 0 112377767778899999999999999875
No 251
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=2e-21 Score=182.97 Aligned_cols=283 Identities=15% Similarity=0.107 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......+++++++++.|.+. .++++||++|+..++ +++++||+|+++.+.|++.. +.......|++++.++..
T Consensus 50 ~~pt~~~le~~la~l~g~~~---~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 124 (366)
T PRK08247 50 GNPTRGVLEQAIADLEGGDQ---GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTA- 124 (366)
T ss_pred CCchHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCC-
Confidence 34567899999999999976 477888899998765 57899999999999877654 445566789999988753
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++|+||+|...++++|.++|++ +|+++|+|++++.+.... ....++|+++.
T Consensus 125 ----d~~~l~~~i~~----~tklv~le~P~NP~~~~~dl~~I~~la~~--~g~~lIvD~t~~~~~~~~-p~~~g~di~i~ 193 (366)
T PRK08247 125 ----SLKAIEQAITP----NTKAIFIETPTNPLMQETDIAAIAKIAKK--HGLLLIVDNTFYTPVLQR-PLEEGADIVIH 193 (366)
T ss_pred ----CHHHHHHhccc----CceEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCCccccccC-chhcCCcEEEe
Confidence 89999999874 56999999999999999999999999999 999999999986543222 22457899999
Q ss_pred cCCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.+|+++|+.+ .|+++.+ +++.+++...+ .. .+ ...+......+..+++ .+...
T Consensus 194 S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~-------------~~-~g----~~~s~~~a~l~~~~l~-----tl~~r 250 (366)
T PRK08247 194 SATKYLGGHNDVLAGLVVAKGQELCERLAYYQ-------------NA-AG----AVLSPFDSWLLIRGMK-----TLALR 250 (366)
T ss_pred ecceeccCCCceeeeEEecChHHHHHHHHHHH-------------Hh-cC----CCCChHHHHHHHhccC-----cHHHH
Confidence 99999976543 4788876 45544443210 00 11 1233322222222222 24556
Q ss_pred HHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh-------------CCeEEccCCC-
Q 015729 275 IERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR-------------YNLSLGLGLN- 339 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------------~~i~v~~g~~- 339 (401)
+++.+++++.+.+.|++. ++..... ++ .+.++.|.++ + .+...++.+. ..+.+.|+..
T Consensus 251 ~~~~~~~a~~l~~~L~~~p~v~~v~~-P~--~gg~~sf~~~-~---~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~ 323 (366)
T PRK08247 251 MRQHEENAKAIAAFLNEQPGVTDVLY-PG--RGGMLSFRLQ-D---EEWVNPFLKSLKLITFAESLGGVESFITYPATQT 323 (366)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEec-CC--cCcEEEEEEC-C---HHHHHHHHHcCCcceEccCCCCCceEEECCcccc
Confidence 777899999999999986 6553211 11 2346667773 2 2222222221 1233333311
Q ss_pred ------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 ------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 ------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
...++.+||++.. |+++.+++-|+.+|+.
T Consensus 324 ~~~~~~~~r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 324 HADIPEEIRIANGVCNRLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred cccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 0123568997644 6777788888777754
No 252
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.90 E-value=9.2e-21 Score=170.35 Aligned_cols=305 Identities=16% Similarity=0.112 Sum_probs=215.7
Q ss_pred HHHHHHHHHHHHHHhc----CC--CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEe
Q 015729 41 PALTKTLLEDIKKIFK----TT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE 114 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g----~~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 114 (401)
...+.++...+.++.+ .+ .+.++++++|.|.++..++..++++||.|++....+.+- ....+..|++++.|+
T Consensus 99 s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~A--L~s~~a~gv~~ipv~ 176 (472)
T KOG0634|consen 99 SSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSA--LQSMEALGVKIIPVK 176 (472)
T ss_pred ccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHH--HHhccccCceEEecc
Confidence 3446677777777665 22 224699999999999999999999999999988765543 355688899999999
Q ss_pred CCCCCCCChHHHHHHHhc-cCC----CCceEE-EEEecCCCcccccch---HHHHHHhhhcCCCcEEEEecccccCcce-
Q 015729 115 SDWGEGAKLDVLASKLAA-DTA----HTIKAI-CIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAID- 184 (401)
Q Consensus 115 ~~~~~~~d~~~le~~~~~-~~~----~~~~~i-~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~li~D~a~~~~~~~- 184 (401)
++.++ +++|.|++.+++ ++. .+++++ .+...+||||..++. ++|.++|++ |+.+||.|+.|.+..+.
T Consensus 177 md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArK--yDfLIVeDdpYy~Lq~~~ 253 (472)
T KOG0634|consen 177 MDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARK--YDFLIVEDDPYYFLQMNT 253 (472)
T ss_pred ccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHH--cCEEEEecCccceeeccc
Confidence 98876 799999999875 221 235555 445668999999986 469999999 99999999987543221
Q ss_pred -------------------------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 185 -------------------------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 185 -------------------------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
.+.+-.|..|-.-|.+|.++.+.++||+.+++..++++.....
T Consensus 254 y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae------------ 321 (472)
T KOG0634|consen 254 YNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAE------------ 321 (472)
T ss_pred cCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcc------------
Confidence 1122235667778999998766788999999988777654211
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHH-c--C-CccccCCCccCCceeEEE
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEG----LENVIERHRRLGKATRLAVEA-W--G-LKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g----~~~~~~~~~~~~~~l~~~L~~-~--g-~~~~~~~~~~~~~~~~~~ 311 (401)
.. ...|+..+..-+-+.+....++| +..++..+..++..+..+|.+ + + +++.++ ..+.++|+
T Consensus 322 ---~~---t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P----~aGmFiwv 391 (472)
T KOG0634|consen 322 ---VA---TSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPP----KAGMFIWV 391 (472)
T ss_pred ---ee---ecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecC----CcceEEEE
Confidence 01 11133333334455555555544 455666677777778888877 3 3 344443 57789999
Q ss_pred EcC-------CCCC-HHHHHHHHHhhCCeEEccCCC---C---CCCc-EEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 312 IVP-------SHIN-SSEIVRRAWQRYNLSLGLGLN---K---VAGK-VFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 312 ~~~-------~~~~-~~~l~~~L~~~~~i~v~~g~~---~---~~~~-~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++| +.++ .+++...+..++||.+.+|.. . -.++ ++|+++ +..+.++++..++++..++++.
T Consensus 392 ~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~-a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 392 EIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSI-AFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred EecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEe-ecCCHHHHHHHHHHHHHHHHHH
Confidence 997 5555 566666666677999998843 1 1133 699954 4578889999999999999863
No 253
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.90 E-value=3.7e-21 Score=192.62 Aligned_cols=321 Identities=14% Similarity=0.065 Sum_probs=208.6
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--------CCCCeEEEEcCCcchHHHHHHHHHcCCcE
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQRLNFNV 110 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~ 110 (401)
++.+.+.++++.+++++|.+.. .+..++|+.|..+.+.++- ...++|+++...|+++. ..+...|+++
T Consensus 540 G~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp--asa~~~GieV 615 (954)
T PRK12566 540 GYRAMIDELEAWLCAITGFDAI--CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP--ASAQMAGMRV 615 (954)
T ss_pred CHHHHHHHHHHHHHHHHCCCeE--eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH--HHHHHCCCEE
Confidence 4567788999999999999873 2445566766645443321 12356777777776553 3366789999
Q ss_pred EEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceec-cCc
Q 015729 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR-MDE 189 (401)
Q Consensus 111 ~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~~ 189 (401)
+.++++.++.+|+++|++++++.. .++++|+++++++..+...++++|.++|++ +|+++++|+++..+...++ ..+
T Consensus 616 v~Vp~D~~G~iDle~L~a~I~~~~-~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~--~Galv~vDgA~~~a~~~l~~Pg~ 692 (954)
T PRK12566 616 VIVECDPDGNVDLDDLKAKAAAAG-DRLSCLMITYPSTHGVYEEGIREICEVVHQ--HGGQVYMDGANLNAQVGLARPAD 692 (954)
T ss_pred EEeccCCCCCcCHHHHHHHhhccC-CCEEEEEEEecCcCceecchHHHHHHHHHH--cCCEEEEEeeChhhccCCCChhh
Confidence 999999888999999999997433 467888899888776666679999999999 9999999999986655554 467
Q ss_pred ccceEEEecCCCcccCCCcceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHH
Q 015729 190 WGIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE 268 (401)
Q Consensus 190 ~~~di~~~s~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~ 268 (401)
+|+|++.+++||||++|.|.|..++.+ ...+.+.+........+... ++-..|. ..+....+..-+..++.++..
T Consensus 693 ~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G--~~~r~ga--~S~~~~gsa~~l~~A~~Yi~~ 768 (954)
T PRK12566 693 IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEG--PDPNNGA--VSAAPWGSASILPISWMYIAM 768 (954)
T ss_pred cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCC--CCCCCCc--eeecccchHHHHHHHHHHHHH
Confidence 899999999999998776655444444 22222222111000000000 0001121 111112222224555566655
Q ss_pred hcHH--HHHHHHHHHHHHHHHHHHHcCCccccCCC-cc--CCceeEEEEcC--CCCCHHHHHHHHHhhCCeEEccCCCCC
Q 015729 269 EGLE--NVIERHRRLGKATRLAVEAWGLKNCTQKE-EW--FSDTVTAVIVP--SHINSSEIVRRAWQRYNLSLGLGLNKV 341 (401)
Q Consensus 269 ~g~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~--~~~~~~~~~~~--~~~~~~~l~~~L~~~~~i~v~~g~~~~ 341 (401)
.|.+ +..+....++.|+++.|.+ ++++..... .. ....+....+| .+.+..++.++|. .+||.....+.+
T Consensus 769 lG~eLk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~-d~Gihapt~~fP- 845 (954)
T PRK12566 769 MGPQLADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLM-DYGFHAPTMSFP- 845 (954)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHH-HCCcEEeEEeec-
Confidence 5644 3334446789999999977 343332211 11 11112222233 2467789999998 458875443333
Q ss_pred CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 342 AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 342 ~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..+.+||++..+.+++|+|+++++++.+.+|+
T Consensus 846 v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 846 VPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999988875
No 254
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=5.8e-21 Score=180.87 Aligned_cols=289 Identities=13% Similarity=0.063 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......+++++++++.|.+. +++++||++|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++..
T Consensus 63 ~~pt~~~Le~~lA~l~g~~~---~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~- 138 (394)
T PRK07050 63 ATPTSLALAQRLAEIEGGRH---ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL- 138 (394)
T ss_pred CCHHHHHHHHHHHHHhCCCe---EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC-
Confidence 44557899999999998753 899999999999999999999999999999877655 334667789999988643
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
+.++++++++ +++++|++++|+||+|...++++|.++|++ +|+++|+|++++.+.. ....+.|+|+++.
T Consensus 139 ----~~~~l~~~i~----~~tklV~le~p~Np~~~~~di~~I~~ia~~--~gi~livD~a~a~~~~-~~~l~~GaDi~v~ 207 (394)
T PRK07050 139 ----IGAGIADLIQ----PNTRLIWLEAPGSVTMEVPDVPAITAAARA--RGVVTAIDNTYSAGLA-FKPFEHGVDISVQ 207 (394)
T ss_pred ----CHHHHHHhcC----CCCeEEEEECCCCCCccHhhHHHHHHHHHH--cCCEEEEECCcccccc-cCHHHcCCeEEEE
Confidence 4577888886 367999999999999999999999999999 9999999999987754 3334567899999
Q ss_pred cCCCcccCCCc--ceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.+|+++|..+ .|++++ ++++.+++... +. ..| .+.+.. ....+++.+. .+..+
T Consensus 208 S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-------------~~-~~G----~~~~~~---~a~l~lr~l~--tl~~R 264 (394)
T PRK07050 208 ALTKYQSGGSDVLMGATITADAELHAKLKLA-------------RM-RLG----IGVSAD---DCSLVLRGLP--SLQVR 264 (394)
T ss_pred ECCceecCCCCeeEEEEEECCHHHHHHHHHH-------------HH-hcC----CCCCHH---HHHHHHcCCC--cHHHH
Confidence 99999976654 366665 56665555421 11 012 123332 2222322211 24557
Q ss_pred HHHHHHHHHHHHHHHHHc-CCcc-c----cCCC--------ccCCceeEEEEcCCCC---CHHHHHHHHHhhCCeEEccC
Q 015729 275 IERHRRLGKATRLAVEAW-GLKN-C----TQKE--------EWFSDTVTAVIVPSHI---NSSEIVRRAWQRYNLSLGLG 337 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~~-~----~~~~--------~~~~~~~~~~~~~~~~---~~~~l~~~L~~~~~i~v~~g 337 (401)
+++..+++..+.+.|++. ++.. . ...+ ....+.++.|.+..+. +..++.+.|. ..++.+..|
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~-~~~~~~s~G 343 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALE-LFAIGWSWG 343 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCC-CCeeccccC
Confidence 777888888899999875 3321 1 1000 0124567888885332 2445555554 235444333
Q ss_pred CC-----------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 338 LN-----------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 338 ~~-----------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.. ...++.+|||+.. ||.|.+++-|.++|+
T Consensus 344 ~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~ 390 (394)
T PRK07050 344 GACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALE 390 (394)
T ss_pred CccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHH
Confidence 11 0123679998654 666677777766665
No 255
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.90 E-value=8.1e-21 Score=177.22 Aligned_cols=337 Identities=20% Similarity=0.126 Sum_probs=234.6
Q ss_pred CCCCcccccCC------CcCChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHH
Q 015729 6 APGKNHLFVPG------PVHIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (401)
Q Consensus 6 ~~~~~~~~~~~------p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~ 75 (401)
.-|+.|++.-. -..-+|.|+++++++... +..+...+...++-++|.+.+..+....+.++++|++|++.
T Consensus 53 vdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~ 132 (447)
T COG0160 53 VDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEA 132 (447)
T ss_pred CCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHH
Confidence 44666776654 255678888888885432 22233336677788888887776544558999999999999
Q ss_pred HHhc--cCCCCCeEEEEcCCcchHHHHHHHHH-------c--C---CcEEEEeCCCCCC--C----------ChHHHHHH
Q 015729 76 ALTN--TLSPGDRIISFLIGQFSLLWIDQQQR-------L--N---FNVDVVESDWGEG--A----------KLDVLASK 129 (401)
Q Consensus 76 ~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~-------~--g---~~~~~v~~~~~~~--~----------d~~~le~~ 129 (401)
++.- ....+..|+....+||+.....+.-. . + ..+..+|.+...+ + ..+.+++.
T Consensus 133 AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~ 212 (447)
T COG0160 133 AIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERA 212 (447)
T ss_pred HHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHH
Confidence 9833 34556789999999998764322211 1 1 1355666543221 1 23445664
Q ss_pred Hhc--cCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---eeccCcc--cceEEEec
Q 015729 130 LAA--DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMDEW--GIDVALTG 198 (401)
Q Consensus 130 ~~~--~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~~--~~di~~~s 198 (401)
+.. ...+++.++++..++...|.+.+ ++++.++|++ +|+++|+|++|+.... .+.++.. .+|+++++
T Consensus 213 i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~--~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~a 290 (447)
T COG0160 213 LFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCRE--HGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLA 290 (447)
T ss_pred HHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCCccccchhhhhcCCCCCEEEec
Confidence 433 11246899999999999999986 7889999999 9999999999975432 2333333 47888887
Q ss_pred CCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHH
Q 015729 199 SQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERH 278 (401)
Q Consensus 199 ~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~ 278 (401)
|.++++.++|.++.++++.+ ..+... ..++.-++..+++..+.|+.+.++ ++.++.
T Consensus 291 --K~ig~G~Pl~avv~r~ei~~-~~~g~~------------------~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a 346 (447)
T COG0160 291 --KSLGGGLPLSAVVGRAEIMD-WPPGGH------------------GGTFGGNPVACAAALAVLDVIEEE---NLLERA 346 (447)
T ss_pred --ccccCCCceeEEeccHHhcc-cCCccc------------------CCCCCcCHHHHHHHHHHHHHHHHc---cHHHHH
Confidence 99988888999999999877 433211 112446667778888888888775 588899
Q ss_pred HHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC-----CC---HHHHHHHHHhhCCeEEccCCCCCCCcEEEE
Q 015729 279 RRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH-----IN---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRI 348 (401)
Q Consensus 279 ~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri 348 (401)
.+..+++++.|+++ .++.... ....+.++.+++-+. .+ ...+++.++++ |+.+..+.. .++.+||
T Consensus 347 ~~~G~~l~~~L~~l~~~~~~Igd--VRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~G~--~~nviRi 421 (447)
T COG0160 347 AELGEYLRDRLEELQEKHPLIGD--VRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTCGP--HGNVLRI 421 (447)
T ss_pred HHHHHHHHHHHHHHHhhcCceec--ccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEeccCC--CCcEEEE
Confidence 99999999999987 5554443 334566777776321 12 34678888877 866543321 2689999
Q ss_pred eecccCCHHHHHHHHHHHHHHHHhc
Q 015729 349 GHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 349 ~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.-.++++++|+++++|++++++.
T Consensus 422 ~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 422 LPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred eCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9988999999999999999998763
No 256
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=2.3e-21 Score=185.00 Aligned_cols=159 Identities=18% Similarity=0.168 Sum_probs=131.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
......+++.++++.|.+. .++++||+.|+..++.+++++||+|+++.+.|.+.. +...++..|++++.++..
T Consensus 63 ~p~~~~Le~~lA~leg~~~---al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~-- 137 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIG---ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS-- 137 (431)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCC--
Confidence 3457789999999999754 788999999999999888999999999998776654 445677889999999763
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++++||||.+.|+++|.++|++ +|+++|+|++++.+....+ .++++|+++.|
T Consensus 138 ---d~e~l~~ai~~----~tklV~l~sp~NPtG~v~di~~I~~la~~--~gi~vIvD~t~a~~~~~~p-l~~gaDivv~S 207 (431)
T PRK08248 138 ---DPENFEAAITD----KTKALFAETIGNPKGDVLDIEAVAAIAHE--HGIPLIVDNTFASPYLLRP-IEHGADIVVHS 207 (431)
T ss_pred ---CHHHHHHhcCC----CCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEeCCCCccccCCh-hHcCCCEEEEc
Confidence 79999999874 56999999999999999999999999999 9999999999875433223 25789999999
Q ss_pred CCCcccCCC-cceEEEe
Q 015729 199 SQKALSLPT-GMGIVCA 214 (401)
Q Consensus 199 ~~K~l~g~~-g~G~l~~ 214 (401)
.+|+++++. .+|.+++
T Consensus 208 ~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 208 ATKFIGGHGTSIGGVIV 224 (431)
T ss_pred CccccCCCCCceEEEEE
Confidence 999996543 2455554
No 257
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.90 E-value=1.1e-20 Score=181.40 Aligned_cols=303 Identities=17% Similarity=0.141 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C------CCCCeEEEEcCCcchHHHHHHHHHcC------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L------SPGDRIISFLIGQFSLLWIDQQQRLN------ 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~------~~gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (401)
+...++.++|.+...... +.+.|+++|++|++.++... . ....+|+....+||+.....+.....
T Consensus 85 ~~~~~la~~l~~~~p~~~-~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 163 (423)
T PRK05964 85 EPAERLAQRLVALTPGGL-DHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHAL 163 (423)
T ss_pred HHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccc
Confidence 445578888888764222 35999999999999988431 1 22367999999998876322211000
Q ss_pred -----CcEEEEeCCCCC--CCChHHHHHHHhccCCCCceEEEEEe-cCCCcccccc----hHHHHHHhhhcCCCcEEEEe
Q 015729 108 -----FNVDVVESDWGE--GAKLDVLASKLAADTAHTIKAICIVH-NETATGVTNN----LSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 108 -----~~~~~v~~~~~~--~~d~~~le~~~~~~~~~~~~~i~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D 175 (401)
..+..++.+.+. ..+++++++.+++.. +++.+|++.. +++..|...+ +++|.++|++ +|+++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~-~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~--~g~llI~D 240 (423)
T PRK05964 164 YTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA-GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDR--HGVLLIFD 240 (423)
T ss_pred ccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC-CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHH--cCCEEEEe
Confidence 122334433221 112788888887544 5678888887 5777887764 8889999999 99999999
Q ss_pred cccccCcc-----eeccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 176 GVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 176 ~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
++|..... .++.....+|+++++ |+++++ .++|+++.++++.+.+....... .+..++ ++
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~~~~~i~~~~~~~~~~~----------~~~~~~--T~ 306 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATLCTAEIFEAFYSDDRAK----------AFMHSP--SY 306 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEEEEcHHHHHhhhcCCccc----------ccccCC--CC
Confidence 99863211 112223357877665 999776 57899999999988764310000 000011 23
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCC---CHHHHHHH
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHI---NSSEIVRR 325 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~ 325 (401)
+.++..++++.++++.+.+++ ..++..++.+++++.|+++ .++.... ....+.++.+.+.+.. ....+.+.
T Consensus 307 ~~np~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i~~--vrg~Gl~~~i~l~~~~~~~~~~~l~~~ 381 (423)
T PRK05964 307 TANPLACAAANASLDLFEDEP---VLERVAALSAGLAEGLEPFRDLPGVAD--VRVLGAIGAVELDRPVLERDGPALRAF 381 (423)
T ss_pred CcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhccCCCeEE--eecccEEEEEEeccCcchhHHHHHHHH
Confidence 466777888888999887653 6678888899999999886 4433221 1134556677774321 25578888
Q ss_pred HHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 326 AWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 326 L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
|.++ ||.+.+. ++.+|+++..++|++|||+++++++++++++
T Consensus 382 l~~~-Gv~v~~~-----~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 382 ALER-GVLLRPL-----GNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred HHHC-CeEEEec-----CCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 8766 9998643 3589999998999999999999999999764
No 258
>PLN02368 alanine transaminase
Probab=99.90 E-value=1.8e-21 Score=184.76 Aligned_cols=249 Identities=12% Similarity=0.045 Sum_probs=172.6
Q ss_pred ccHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccC-CCCCeEEEEcCCcchHHHHHHHHHcCCcEE
Q 015729 38 PAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTL-SPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (401)
|.......++|+.+++++ |.+ .+++|++|+|+++|+..++.+++ ++||+|++++|+|+.+. ..++..|++++
T Consensus 103 Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~--~~~~~~g~~~v 180 (407)
T PLN02368 103 YSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS--ATISLLGGTLV 180 (407)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH--HHHHHcCCEEE
Confidence 333445667888888877 533 34569999999999999988887 79999999999887664 56778899999
Q ss_pred EEeCCCC--CCCChHHHHHHHhcc--CCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcc-
Q 015729 112 VVESDWG--EGAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAI- 183 (401)
Q Consensus 112 ~v~~~~~--~~~d~~~le~~~~~~--~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~- 183 (401)
.++++.+ +.+|++++++.+++. ...+++++++++|+||||.+++ +++|.++|++ +|++||+|++|.....
T Consensus 181 ~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~--~~~~II~DE~Y~~l~y~ 258 (407)
T PLN02368 181 PYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQ--ERLVLLGDEVYQQNIYQ 258 (407)
T ss_pred EEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHH--cCCEEEEEccccccccC
Confidence 9998753 578999999998631 1126799999999999999997 4567788888 9999999999864321
Q ss_pred ---ee-c-------cC----cccceEEEecCCCcccC--CCcceEEEe---cHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 184 ---DF-R-------MD----EWGIDVALTGSQKALSL--PTGMGIVCA---SPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 184 ---~~-~-------~~----~~~~di~~~s~~K~l~g--~~g~G~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
++ . .. .....+++.|.+|.+.+ +.++||+++ ++++++.+.....
T Consensus 259 ~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~---------------- 322 (407)
T PLN02368 259 DERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS---------------- 322 (407)
T ss_pred CCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc----------------
Confidence 11 1 00 12246788999999743 344699984 7777666653210
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHH---------HhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIF---------EEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~---------~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 313 (401)
..++++.....++.+++..-. ....++..+.++++++.+.+.|+++ |+.+..++ ...++|.++
T Consensus 323 ---~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~----Gafy~~~~i 395 (407)
T PLN02368 323 ---IALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTE----GAMYSFPQI 395 (407)
T ss_pred ---ccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCC----eeeEeccCC
Confidence 011244444444444543100 0112446788899999999999997 87776553 334555444
No 259
>PLN02624 ornithine-delta-aminotransferase
Probab=99.89 E-value=5.8e-21 Score=185.02 Aligned_cols=311 Identities=19% Similarity=0.196 Sum_probs=206.7
Q ss_pred hHHHHHHHccCcCCC--CC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC---------CCCC-eE
Q 015729 21 PDQVIRAMNRNNEDY--RS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---------SPGD-RI 87 (401)
Q Consensus 21 ~~~v~~a~~~~~~~~--~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~---------~~gd-~v 87 (401)
+|.|++++.+..... .. ....+...++.++++++++.+ .++++++|++|++.++.... .+++ +|
T Consensus 93 ~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~~---~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~i 169 (474)
T PLN02624 93 HPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGYD---MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAII 169 (474)
T ss_pred CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCCC---eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEE
Confidence 677777776644321 11 122455678999999988643 48999999999999884211 1133 56
Q ss_pred EEEcCCcchHHHHHHHHHcC-----------CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-
Q 015729 88 ISFLIGQFSLLWIDQQQRLN-----------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g-----------~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~- 155 (401)
+....+||+.....+..... ..+..++.+ |++.+++.++... .++++|++..+++++|.+.|
T Consensus 170 i~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~-~~iaaiiiEpv~~~~G~v~p~ 243 (474)
T PLN02624 170 VSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEEDG-DRIAAFLFEPIQGEAGVVIPP 243 (474)
T ss_pred EEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHHHhCC-CCEEEEEECCccCCCCCcCCC
Confidence 77766777764322221100 012223221 7899999887533 57899999999999999987
Q ss_pred ---hHHHHHHhhhcCCCcEEEEeccccc-Cc----ceeccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCC
Q 015729 156 ---LSKVRKLLDEYRHPALFLVDGVSSI-CA----IDFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAK 226 (401)
Q Consensus 156 ---l~~i~~l~~~~~~~~~li~D~a~~~-~~----~~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~ 226 (401)
+++|.++|++ ||+++|+|++|.. |. ...+.....+|++++| |.++++ .++|+++.++++...+....
T Consensus 244 ~~~L~~l~~lc~~--~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~~~~~~~~ 319 (474)
T PLN02624 244 DGYLKAVRELCSK--HNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVMLCIKPGE 319 (474)
T ss_pred HHHHHHHHHHHHH--cCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEec--ccccCCCCcceeeeecHHHHhHhccCC
Confidence 8999999999 9999999999972 21 1223334457888875 888665 46799999888766554321
Q ss_pred CCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC--Cc-cccCCCcc
Q 015729 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LK-NCTQKEEW 303 (401)
Q Consensus 227 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~~ 303 (401)
.+. .++.++..++++.++++.+.++ ++.++..++.+++++.|+++. ++ .+....
T Consensus 320 ----------------~~~--T~~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vr-- 376 (474)
T PLN02624 320 ----------------HGS--TFGGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEVR-- 376 (474)
T ss_pred ----------------cCC--CCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEEE--
Confidence 011 2245666778888888877654 356667777888888887752 32 111111
Q ss_pred CCceeEEEEcCCC----CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 304 FSDTVTAVIVPSH----INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 304 ~~~~~~~~~~~~~----~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
..+.++.+.++.. ..+.++++.|.++ ||.+.++ .++++||++...+|++|+++++++|+++++.
T Consensus 377 g~G~~~~i~l~~~~~~~~~a~~~~~~L~e~-GV~v~p~----~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 377 GRGLLNAVVLNSPKLGPVSAYDVCLKLKER-GLLAKPT----HDTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred eeEEEEEEEecCCCcChHHHHHHHHHHHhC-CeEEecC----CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 1334555666322 2345788888766 9998765 2568999988889999999999999988753
No 260
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.89 E-value=1.2e-20 Score=179.75 Aligned_cols=321 Identities=16% Similarity=0.108 Sum_probs=209.6
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCCCC----C---ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYR----S---PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~---~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~ 79 (401)
++..|.+-.|-+++++++++++.+....+. . ......+.++++.+++++|.+. .++++|++.|+..++.
T Consensus 80 tg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~---alvv~sg~aAi~l~l~- 155 (454)
T TIGR00474 80 TGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED---ALVVNNNAAAVLLALN- 155 (454)
T ss_pred CCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHH-
Confidence 445566666778899999999987443221 0 1123457899999999999876 5667888999988874
Q ss_pred cCCCCCeEEEEcCCcch----HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc--c--
Q 015729 80 TLSPGDRIISFLIGQFS----LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--G-- 151 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~----~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t--G-- 151 (401)
.+.+||+|+++...|.. ..+....+..|+++++++.+. ..+++++++++++ +++++++++++|++ |
T Consensus 156 ~l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~~----~T~lv~~~h~sN~~~~G~~ 229 (454)
T TIGR00474 156 TLAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAITE----NTALLLKVHTSNYRIVGFT 229 (454)
T ss_pred HhCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcCc----CCEEEEEEccCcccccCCC
Confidence 47899999999875432 123345677899999987643 3479999999974 56999999999884 6
Q ss_pred cccchHHHHHHhhhcCCCcEEEEeccccc---------Ccce--eccCcccceEEEecCCCcccCCCcceEEEecHHHHH
Q 015729 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSI---------CAID--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (401)
Q Consensus 152 ~~~~l~~i~~l~~~~~~~~~li~D~a~~~---------~~~~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~ 220 (401)
...|+++|.++|++ +|+++++|.+.+. +..+ .+..+.|+|++++|+||+++|+. .|+++++++.++
T Consensus 230 ~~~dl~~I~~la~~--~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~~i~ 306 (454)
T TIGR00474 230 EEVSIAELVALGRE--HGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIE 306 (454)
T ss_pred CCCCHHHHHHHHHH--cCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECHHHHH
Confidence 57899999999999 9999999976321 1111 24446789999999999997664 699999999887
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-----------HHHHHHHHHHHHHHHHHHH
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-----------LENVIERHRRLGKATRLAV 289 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-----------~~~~~~~~~~~~~~l~~~L 289 (401)
++.... +. +.+..+. ..++++.+++..+.... +....++.+++++.+.+.|
T Consensus 307 ~l~~~~-------l~---r~lr~~k--------~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L 368 (454)
T TIGR00474 307 RLKKNP-------LT---RALRVDK--------LTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRL 368 (454)
T ss_pred hhhhch-------hH---HHHhhCh--------HHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHH
Confidence 665321 11 1111111 22334444444432210 2223446667778888888
Q ss_pred HHc---CC--ccccCC--------CccCCceeEEEEc-CCCCCHHHHHHHHHhhCC--eEEccCCCCCCCcEEEEeeccc
Q 015729 290 EAW---GL--KNCTQK--------EEWFSDTVTAVIV-PSHINSSEIVRRAWQRYN--LSLGLGLNKVAGKVFRIGHLGH 353 (401)
Q Consensus 290 ~~~---g~--~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~~--i~v~~g~~~~~~~~~Ri~~~~~ 353 (401)
++. ++ ++.... +....+ -..+.+ +.+.+..++.++|++. . |..+ ...+.+.+-+. +
T Consensus 369 ~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~-~~~v~~~~~~~~~~~l~~~lr~~-~~~ii~r-----~~~~~~~ld~r-~ 440 (454)
T TIGR00474 369 KAALGPGFELEIVPGLSQVGGGSLPDERLP-SYAVTLTPDGLSAEKLEARLREL-PPPIIGR-----IEDDRFLLDLR-T 440 (454)
T ss_pred HhhccCCceEEEEEcCCcccCCCCcCCCCC-eEEEEEecCCCCHHHHHHHHhcC-CCCEEEE-----EECCEEEEEeC-c
Confidence 763 22 222211 111112 222333 3456788999999753 3 3332 22445555443 3
Q ss_pred CCHHHHHHHHHHH
Q 015729 354 LNELQLLGCLAGV 366 (401)
Q Consensus 354 ~~~~di~~~~~~i 366 (401)
+.++|++.+++++
T Consensus 441 ~~~~~~~~~~~~~ 453 (454)
T TIGR00474 441 LLEDEEELLIEAL 453 (454)
T ss_pred CCHHHHHHHHHHh
Confidence 6788888888776
No 261
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=1.6e-20 Score=179.41 Aligned_cols=286 Identities=14% Similarity=0.077 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C------CCCCeEEEEcCCcchHHHHHHHHHcCCc----
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L------SPGDRIISFLIGQFSLLWIDQQQRLNFN---- 109 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~------~~gd~vl~~~~~~~~~~~~~~~~~~g~~---- 109 (401)
+...++.++++++.+.+ .+++++||++|++.++... . .+.++|+..+.+||+.....+ ...+..
T Consensus 81 ~~~~~la~~l~~~~~~~---~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~-~~~~~~~~~~ 156 (406)
T PRK12381 81 EPVLRLAKKLIDATFAD---RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTV-SAGGQPKYSQ 156 (406)
T ss_pred HHHHHHHHHHHhhCCCC---eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHH-hhcCCccccc
Confidence 44568889999887543 4999999999999988542 1 245689999998888764221 212211
Q ss_pred --------EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccc-cc----chHHHHHHhhhcCCCcEEEEec
Q 015729 110 --------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV-TN----NLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 110 --------~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~-~~----~l~~i~~l~~~~~~~~~li~D~ 176 (401)
+..++. .|++++++.++ +++++|++.. .+++|- .. .+++|.++|++ ||+++|+|+
T Consensus 157 ~~~~~~~~~~~~~~-----~d~~~l~~~l~----~~~aaviiEP-v~~~gg~~~~~~~~l~~l~~l~~~--~~~llI~DE 224 (406)
T PRK12381 157 DFAPLPPDIRHAAY-----NDLNSASALID----DQTCAVIVEP-IQGEGGVIPADKAFLQGLRELCDR--HNALLIFDE 224 (406)
T ss_pred CCCCCCCCeeEeCC-----CCHHHHHHhcc----CCeeEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEcc
Confidence 122221 27899999886 3578888874 455554 32 37889999999 999999999
Q ss_pred ccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 177 VSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 177 a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
+|..... .+ ......+|++ +.+|.++++..+|+++.++++.+.+..... + ..++.
T Consensus 225 v~tG~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~----------------~--~t~~~ 284 (406)
T PRK12381 225 VQTGVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTEKCASVMTVGTH----------------G--TTYGG 284 (406)
T ss_pred hhhCCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcHHHHhhcCCCCC----------------C--CCCCC
Confidence 9852211 11 1112346765 556999766678999999998877653211 1 12345
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC--CccccCCCccCCceeEEEEcCCCC--CHHHHHHHHH
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEEWFSDTVTAVIVPSHI--NSSEIVRRAW 327 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~ 327 (401)
++..++++.++++.+.+. +.++++.++.+++.+.|++++ +.+... ....+.++++.+++.. ....+.+.|.
T Consensus 285 ~pl~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--vrg~Gl~~~~~l~~~~~~~~~~~~~~l~ 359 (406)
T PRK12381 285 NPLASAVAGKVLELINTP---EMLNGVKQRHDWFVERLNTINARYGLFSE--IRGLGLLIGCVLNAEYAGKAKQISQEAA 359 (406)
T ss_pred CHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEE--EecCeEEEEEEecCchhhHHHHHHHHHH
Confidence 666778888888887543 477888899999999998863 332221 1134567777775432 3467888887
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 328 ~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++ ||.+.+. ..+.+|+++...+|++|+++++++|+++++++
T Consensus 360 ~~-Gv~v~~~----g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 400 (406)
T PRK12381 360 KA-GVMVLIA----GPNVVRFAPALNISEEEITTGLDRFARACERF 400 (406)
T ss_pred HC-CcEEeeC----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 76 9998643 23689998887899999999999999998765
No 262
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.3e-20 Score=167.42 Aligned_cols=316 Identities=15% Similarity=0.074 Sum_probs=207.6
Q ss_pred cCChHHHHHHHccCc-CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 18 VHIPDQVIRAMNRNN-EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
....|+++++|.... .....|+.++...++++.+++++|... ++|+++||+|+.+++.+.++||..|++-...|..
T Consensus 10 ~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~~a---~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~ 86 (342)
T COG2008 10 AGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGKEA---ALFVPSGTQANQLALAAHCQPGESVICHETAHIY 86 (342)
T ss_pred CCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCCce---EEEecCccHHHHHHHHHhcCCCCeEEEeccccce
Confidence 455688999999966 444557778899999999999999933 9999999999999999999999999999887776
Q ss_pred HH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC-CC-CceEEEEEecCCCcccccch---HHHHHHhhhcCCCc
Q 015729 97 LL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT-AH-TIKAICIVHNETATGVTNNL---SKVRKLLDEYRHPA 170 (401)
Q Consensus 97 ~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~-~~-~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~ 170 (401)
.. .+...-..++....+.-..++.++++++++.+..+. .+ .+..+++.+.+|..|+++|+ ++|.++||+ +|+
T Consensus 87 ~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~--~~l 164 (342)
T COG2008 87 TDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKE--HGL 164 (342)
T ss_pred ecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHH--hCC
Confidence 55 222333334445545445678899999999887521 11 23344444444577999985 457888999 999
Q ss_pred EEEEecccccCc---ceeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 171 LFLVDGVSSICA---IDFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 171 ~li~D~a~~~~~---~~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
.|+.|++--+-+ ...+.. .-++|+++++++|.++.+. -++|+++.++.+++.-.+. . .|.
T Consensus 165 ~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~-gAiv~gn~~~~~~a~~~rK------------~--~Gg 229 (342)
T COG2008 165 PLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV-GAIVFGNRDFAKRARRWRK------------R--AGG 229 (342)
T ss_pred ceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee-eeEEEcCHHHHHHHHHHHH------------H--hcc
Confidence 999998743211 111222 2379999999999885444 4899999998776653211 0 010
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHH--HHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHH
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRL--GKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~--~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (401)
-.+-.. -+.++...+.+.++ ......+++ ++.|.+.|++. |+++..+. ..+ .+.+.+|+. .+
T Consensus 230 ----l~~k~r--~laA~~~~~l~~~~-~~~~~~Han~mA~~La~~~~~~~G~~~~~~~---~tN-~vf~~l~~~----~i 294 (342)
T COG2008 230 ----LMRKAR--FLAAQGLYALEDDV-WRLAADHANAMAARLAEGLEAKPGVKLAFPV---ETN-MVFVRLPES----AI 294 (342)
T ss_pred ----cHhhhh--HHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHhhhhcCCceeccCC---ccc-EEEEECChH----HH
Confidence 011111 12223333333342 233344455 99999999975 99987652 344 454667532 11
Q ss_pred HHHHHhhCCeEEccCCCCCCC-cEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 323 VRRAWQRYNLSLGLGLNKVAG-KVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~-~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.|... ++....+...... ..+|+.++..++++|+|+++..+++.+
T Consensus 295 -~~l~~~-~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 295 -EALRLA-GALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -HHHHhh-chhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 333322 3333332221122 369999999999999999999998764
No 263
>PLN02509 cystathionine beta-lyase
Probab=99.89 E-value=5.7e-21 Score=182.57 Aligned_cols=285 Identities=13% Similarity=0.118 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
....++++.++++.|.+. .+++++|++|+..++ .++++||+|+++.+.|.++. +.......|++++.++.
T Consensus 133 pt~~aLE~~lA~leg~e~---ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~---- 204 (464)
T PLN02509 133 PTRDALESLLAKLDKADR---AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT---- 204 (464)
T ss_pred HHHHHHHHHHHHHhCCCE---EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC----
Confidence 467899999999987654 567778888886554 57899999999999877654 33455678998888863
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
.|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+.... ....++|++++|.
T Consensus 205 -~d~e~l~~ai~~----~TklV~lesPsNPtG~i~Dl~~I~~lAk~--~g~~lIVD~A~a~~~~~~-pl~~gaDivv~S~ 276 (464)
T PLN02509 205 -TNLDEVAAAIGP----QTKLVWLESPTNPRQQISDIRKIAEMAHA--QGALVLVDNSIMSPVLSR-PLELGADIVMHSA 276 (464)
T ss_pred -CCHHHHHHhCCc----CCeEEEEECCCCCCCCHHHHHHHHHHHHH--cCCEEEEECCccccccCC-hhhcCCcEEEecC
Confidence 278999998863 56999999999999999999999999999 999999999988765422 2346799999999
Q ss_pred CCcccCCCc--ceEEEecHHH-HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 200 QKALSLPTG--MGIVCASPKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 200 ~K~l~g~~g--~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
+|+++|+.+ .|+++++++. ..++... ... .|. ..++..++....+++. +..+++
T Consensus 277 tK~l~G~gdv~gG~v~~~~~~l~~~~~~~-------------~~~-~g~----~l~p~~A~l~lr~L~t-----L~~R~~ 333 (464)
T PLN02509 277 TKFIAGHSDVMAGVLAVKGEKLAKEVYFL-------------QNS-EGS----GLAPFDCWLCLRGIKT-----MALRIE 333 (464)
T ss_pred cccccCCCccceeEEEeccHHHHHHHHHH-------------HHh-cCC----CcCHHHHHHHHhhhhh-----HHHHHH
Confidence 999987655 5888876553 2222210 000 121 2344333333333332 466888
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCceeEEEEcCCCC-CHHHHHHHHHhhCCeEEccCCC--
Q 015729 277 RHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGLN-- 339 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~~i~v~~g~~-- 339 (401)
+.+++++.+.+.|++. .++ +..+ .+. ...+.++.|.+ .+. .+..+.+.|. -+.+.+..|..
T Consensus 334 r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~~f~~~l~-l~~~a~slG~~~S 411 (464)
T PLN02509 334 KQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSKHLVETTK-YFSIAVSFGSVKS 411 (464)
T ss_pred HHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHHHHHHcCC-cceEcccCCCCCc
Confidence 8999999999999875 332 2111 110 12356888887 331 1223333331 12233332211
Q ss_pred ---------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 340 ---------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 340 ---------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
....+.+|+|+.. ||+|.+++-|+.+|+
T Consensus 412 Li~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 412 LISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFR 460 (464)
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHc
Confidence 0123579998654 678888888887774
No 264
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.89 E-value=7.3e-21 Score=178.83 Aligned_cols=280 Identities=15% Similarity=0.115 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-H-HHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-W-IDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~-~~~~~~~g~~~~~v~~~~ 117 (401)
......+++++++++. . .+ .+++++|++|+..++.+++++||+|++++++|++.. + .......|++++.++.+.
T Consensus 49 ~~p~~~~Le~~lA~l~-~--~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~ 124 (366)
T PRK07582 49 SNPTWRALEAALGELE-G--AE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAG 124 (366)
T ss_pred CCccHHHHHHHHHHHc-C--CC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCC
Confidence 3456789999999998 2 22 677788899999999889999999999999887765 2 223456799999998653
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccccc--CcceeccCcccceEE
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI--CAIDFRMDEWGIDVA 195 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~--~~~~~~~~~~~~di~ 195 (401)
.. + .+. ++++++++++|+||+|.+.|+++|.++|++ +|+++++|++++. +..++ +.++|++
T Consensus 125 ~~-------~-~~~----~~t~lV~le~p~NPtg~v~di~~I~~~a~~--~g~~lvVD~t~~~~~~~~p~---~~g~Div 187 (366)
T PRK07582 125 MA-------E-AAL----AGADLVLAETPSNPGLDVCDLAALAAAAHA--AGALLVVDNTTATPLGQRPL---ELGADLV 187 (366)
T ss_pred hH-------H-Hhc----cCceEEEEECCCCCCCCccCHHHHHHHHHH--cCCEEEEECCCCCccccCch---hcCCcEE
Confidence 21 1 222 356899999999999999999999999999 9999999999753 33333 3578999
Q ss_pred EecCCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHH
Q 015729 196 LTGSQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLE 272 (401)
Q Consensus 196 ~~s~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~ 272 (401)
++|.+|+++|+.| .|+++.+ +++.+++... ... .| .+++......+...++ -++
T Consensus 188 v~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~-------------~~~-~g----~~~~~~~a~l~~r~l~-----tl~ 244 (366)
T PRK07582 188 VASDTKALTGHSDLLLGYVAGRDPELMAAVERW-------------RLL-AG----AIPGPFEAWLAHRSLG-----TLG 244 (366)
T ss_pred EecccccccCCCCeeEEEEEcCcHHHHHHHHHH-------------HHH-hC----CCCCHHHHHHHHhccc-----cHH
Confidence 9999999988776 4888875 5655544321 111 11 1344433222222222 245
Q ss_pred HHHHHHHHHHHHHHHHHHHc-CCcc-cc---CCCc---------cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEc---
Q 015729 273 NVIERHRRLGKATRLAVEAW-GLKN-CT---QKEE---------WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG--- 335 (401)
Q Consensus 273 ~~~~~~~~~~~~l~~~L~~~-g~~~-~~---~~~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~--- 335 (401)
.+.++..+++..+.+.|++. .+.. .. +..+ ...+.++.|+++ +.+++.+.+. +.++...
T Consensus 245 ~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~---~~~~~~~~~~-~l~~~~~~~s 320 (366)
T PRK07582 245 LRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA---DAAAAERFVA-ASRLVVAATS 320 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC---CHHHHHHHHH-hCCcceeccc
Confidence 67788889999999999985 4322 11 1111 013568889984 3455555554 3354432
Q ss_pred cCCC------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 336 LGLN------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 336 ~g~~------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.|.. ...++.+|+|+.. |+.+.+++.|+++|+
T Consensus 321 ~G~~~sl~~~~~~~~~~~~~~liR~svGl----E~~~dli~dl~~al~ 364 (366)
T PRK07582 321 FGGVHTSADRRARWGDAVPEGFVRLSCGI----EDTDDLVADLERALD 364 (366)
T ss_pred CCCccchhhhHHHcCCCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 2210 0234579998766 344445555555443
No 265
>PRK07049 methionine gamma-lyase; Validated
Probab=99.89 E-value=6.1e-21 Score=182.30 Aligned_cols=294 Identities=13% Similarity=0.064 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHH--HHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLW--IDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--~~~~~~~g~~~~~v~~~~~~ 119 (401)
....++++.|+++.|.+. +++++||++|+..++.+++++||+|+++.+.|.++.. ...+...|++++.++..
T Consensus 83 Pt~~~Le~~lA~leg~~~---~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~--- 156 (427)
T PRK07049 83 PNSEIVEDRLAVYEGAES---AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG--- 156 (427)
T ss_pred cCHHHHHHHHHHHhCCCc---EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC---
Confidence 446799999999998653 7888999999999999999999999999998777652 23456679887766522
Q ss_pred CCChHHHHHHHhccC-CCCceEEEEEecCCCcccccchHHHHHHhhhcC----CCcEEEEecccccCcceeccCcccceE
Q 015729 120 GAKLDVLASKLAADT-AHTIKAICIVHNETATGVTNNLSKVRKLLDEYR----HPALFLVDGVSSICAIDFRMDEWGIDV 194 (401)
Q Consensus 120 ~~d~~~le~~~~~~~-~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~----~~~~li~D~a~~~~~~~~~~~~~~~di 194 (401)
.|++++++.+++.. .++++++++++|+||||.++|+++|.++++..+ +++++++|+++..... ......++|+
T Consensus 157 -~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~-~~pl~~g~di 234 (427)
T PRK07049 157 -LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF-QKPLEHGADL 234 (427)
T ss_pred -CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc-CCccccCCCE
Confidence 46788887775311 136799999999999999999999999888732 6899999999654322 1222457899
Q ss_pred EEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHH
Q 015729 195 ALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLE 272 (401)
Q Consensus 195 ~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~ 272 (401)
++.|.+|+++|.+| +|+++.++++.+.+...+ . .+..+.+...+..+...++ .+.
T Consensus 235 vv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~------------~------~~g~~ls~~~a~l~~r~L~-----tl~ 291 (427)
T PRK07049 235 SVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALR------------S------AIGTQLDPHSCWMLGRSLE-----TLV 291 (427)
T ss_pred EEEcCceeecCCCCcEEEEEECCHHHHHHHHHHH------------H------hcCCCCCHHHHHHHHcCCC-----hHH
Confidence 99999999986554 599998888766664321 0 1122355543333333332 245
Q ss_pred HHHHHHHHHHHHHHHHHHHc-CCcc-ccC-----CCc---------cCCceeEEEEcCCCC-CHHHHHHHHHhhCCeEEc
Q 015729 273 NVIERHRRLGKATRLAVEAW-GLKN-CTQ-----KEE---------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLG 335 (401)
Q Consensus 273 ~~~~~~~~~~~~l~~~L~~~-g~~~-~~~-----~~~---------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~~i~v~ 335 (401)
..+++..++++.+.+.|++. ++.- .-+ ..+ ...+.++.|.+..+. .+..+.+.|. -+++.+.
T Consensus 292 ~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-l~~~~~s 370 (427)
T PRK07049 292 LRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQ-IFKLAVS 370 (427)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCc-ccEEccc
Confidence 56777789999999999875 4322 111 000 123568889884221 1223333332 2222222
Q ss_pred cCCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 336 LGLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 336 ~g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.|.. ...++.+|||+.. ||.|.+++-|+.+|+
T Consensus 371 lG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 371 LGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred CCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 2211 0123569998654 777888888877775
No 266
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=4.9e-21 Score=180.46 Aligned_cols=213 Identities=17% Similarity=0.105 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.++++.|.+. .+++++|+.|+..++ +++++||+|+++.+.|.+.+ +...+...|++++.++..
T Consensus 49 ~p~~~~Le~~lA~l~g~~~---~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 122 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHA---GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTS-- 122 (377)
T ss_pred ChHHHHHHHHHHHHhCCCc---eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCC--
Confidence 4567899999999999865 456777888887665 57899999999999876554 334556789999988743
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|++++|
T Consensus 123 ---d~~~l~~ai~~----~tklV~le~P~NPtg~~~dl~~I~~la~~--~g~~lvvD~a~~~~~~~-~p~~~g~Divv~S 192 (377)
T PRK07671 123 ---NLEEVEEAIRP----NTKAIYVETPTNPLLKITDIKKISTIAKE--KGLLTIVDNTFMTPYWQ-SPISLGADIVLHS 192 (377)
T ss_pred ---CHHHHHHhcCC----CCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCCCccccC-ChhhhCCeEEEec
Confidence 89999999974 56999999999999999999999999999 99999999998754322 2234678999999
Q ss_pred CCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++|+.+ .|+++++ +++.+++... .... | ...+... +..++..+. -+..++
T Consensus 193 ~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~-------------~~~~-g----~~~~~~~---a~l~~~~l~--tl~~R~ 249 (377)
T PRK07671 193 ATKYLGGHSDVVAGLVVVNSPELAEDLHFV-------------QNST-G----GILGPQD---SWLLLRGLK--TLGIRM 249 (377)
T ss_pred CcccccCCccceeEEEEeCcHHHHHHHHHH-------------HHhh-c----CCCCHHH---HHHHHcCcC--hHHHHH
Confidence 9999976653 3667665 4555544321 1110 1 1233321 222222211 145678
Q ss_pred HHHHHHHHHHHHHHHHc
Q 015729 276 ERHRRLGKATRLAVEAW 292 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~ 292 (401)
++.+++++.+.+.|++.
T Consensus 250 ~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 250 EEHETNSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88889999999999874
No 267
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=1.8e-20 Score=180.47 Aligned_cols=302 Identities=19% Similarity=0.140 Sum_probs=200.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHc-C----------
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRL-N---------- 107 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~-g---------- 107 (401)
.+...++.++|+++++... +.+.|+++|++|++.++.. .+....+|+....+||+.....+.-.. .
T Consensus 85 ~~~~~~la~~L~~~~~~~~-~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 163 (433)
T PRK08117 85 YESILKLAEELAEITPGGL-DCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPL 163 (433)
T ss_pred CHHHHHHHHHHHHhCCCCC-CEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCC
Confidence 3556788899998874222 3589999999999998853 233446788888888886533221110 0
Q ss_pred -CcEEEEeCCCCCC------------CChHHHHHHHhc-cCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCC
Q 015729 108 -FNVDVVESDWGEG------------AKLDVLASKLAA-DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHP 169 (401)
Q Consensus 108 -~~~~~v~~~~~~~------------~d~~~le~~~~~-~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~ 169 (401)
..+..++.+.... -+++.+++.+++ ...+++.+|++.......|.+.+ ++++.++|++ ||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~--~g 241 (433)
T PRK08117 164 LGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDR--HG 241 (433)
T ss_pred CCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHH--cC
Confidence 0123333322111 145667777653 11246889999999998999987 8999999999 99
Q ss_pred cEEEEecccccCcc---eeccCccc--ceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 170 ALFLVDGVSSICAI---DFRMDEWG--IDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 170 ~~li~D~a~~~~~~---~~~~~~~~--~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
+++|+|++|+.... .+..+..+ +|++ +.+|.++++.++|+++.++++.+.+..... +
T Consensus 242 ~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~--t~sK~lg~G~pigav~~~~~i~~~~~~~~~----------------~ 303 (433)
T PRK08117 242 ILLIFDEVQTGFGRTGEWFAAQTFGVVPDIM--TIAKGIASGLPLSAVVASKELMEQWPLGSH----------------G 303 (433)
T ss_pred CEEEEecchhccCccccchhHhhcCCCCCEe--ehhhhccCCCcceeEEEcHHHHhhccCCCC----------------C
Confidence 99999999883211 11112223 5654 556999776668999999998776642210 1
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC------
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH------ 316 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~------ 316 (401)
. .++.++..+++..++++.+.+. +..++..++.+++++.|+++ .+.+... ....+.++.+.+.+.
T Consensus 304 ~--T~~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~--vrg~Gl~~gi~~~~~~~~~~~ 376 (433)
T PRK08117 304 T--TFGGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGD--VRGIGLMIGIEIVDPDGEPDG 376 (433)
T ss_pred C--CCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceee--eecCCcEEEEEEecCCCCcch
Confidence 1 2345677788888899887654 36677778888888888875 2332221 123445666666221
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.....+.+.|.++ ||.+.+... .++.+|+++...+|++|+++++++|.++++++
T Consensus 377 ~~~~~~~~~l~~~-Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 377 DAVEKILDKCLEK-GLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred HHHHHHHHHHHHC-CCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1234577777766 988765321 25689999888899999999999999998764
No 268
>PLN00144 acetylornithine transaminase
Probab=99.89 E-value=3.3e-20 Score=175.39 Aligned_cols=287 Identities=16% Similarity=0.114 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C-C------C------CCeEEEEcCCcchHHHHHHHHHc
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L-S------P------GDRIISFLIGQFSLLWIDQQQRL 106 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~-~------~------gd~vl~~~~~~~~~~~~~~~~~~ 106 (401)
+...++.++|.+..+. +.+.++++|++|++.++... . . + ..+|+....+||+.....+.. .
T Consensus 57 ~~~~~la~~l~~~~~~---~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~-~ 132 (382)
T PLN00144 57 IPQVELAKRLVASSFA---DRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALAL-T 132 (382)
T ss_pred HHHHHHHHHHHhcCCC---CeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhc-C
Confidence 4455777777776532 35999999999999988431 1 1 1 257899999999876433321 1
Q ss_pred CC------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCc
Q 015729 107 NF------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPA 170 (401)
Q Consensus 107 g~------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~ 170 (401)
+- .+..++.+ |++++++.+.. ++++++++...+|+.|...+ +++|.++|++ +|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~---~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~--~g~ 202 (382)
T PLN00144 133 SKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQK---GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDE--AGA 202 (382)
T ss_pred CCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCC---CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHH--cCC
Confidence 11 11222221 78999988853 46889999988999665542 7889999999 999
Q ss_pred EEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 171 LFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 171 ~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
++|+|+++..... .+ +.....+|++++ +|.++++.++|++++++++.+.+..... +
T Consensus 203 llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~--sK~l~~G~pig~v~~~~~~~~~~~~~~~----------------~- 263 (382)
T PLN00144 203 LLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTL--AKPLAGGLPIGAVLVTEKVASAINPGDH----------------G- 263 (382)
T ss_pred EEEEechhhCCCccchHhhhhhcCCCCCEEEe--cccccCCcceEEEEEcHHHHhccCCCCC----------------C-
Confidence 9999999874321 11 223345775555 5999877778999999998877653211 1
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCCCCHHHHH
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIV 323 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (401)
..++.++..++++.++++++.+.+ ..++..+..+++++.|+++ ..+.... -...+.++++++ + .+...+.
T Consensus 264 -~T~~~~pl~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~~~~--vrg~G~~~~l~l-~-~~~~~~~ 335 (382)
T PLN00144 264 -STFAGGPLVCNAALAVLDKISKPG---FLASVAKKGEYLRELLRRKLGGNPHVKE--VRGVGLLVGIQL-D-VPAGPLV 335 (382)
T ss_pred -CCCCCCHHHHHHHHHHHHHHhhch---HHHHHHHHHHHHHHHHHHHHhhCCCcee--eecCceEEEEEe-c-CccHHHH
Confidence 133466667788888889887643 4555666666666666653 3322211 112567888888 3 2457888
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
..+.++ ||.+.++.. ++.+|+++....+++|+++++++|++++.++
T Consensus 336 ~~~~~~-Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 336 DACRDS-GLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHC-CeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 888876 999887621 4789998877789999999999999998753
No 269
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.1e-20 Score=180.15 Aligned_cols=164 Identities=18% Similarity=0.177 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
..+...++++.+++++|.+. .+++++|+.|+.+++.+++++||+|+++...|.+.. +...+...|+++++++ +.
T Consensus 67 ~~pt~~~le~~la~l~g~~~---~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~ 142 (437)
T PRK05613 67 TNPTVEALENRIASLEGGVH---AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NP 142 (437)
T ss_pred cChHHHHHHHHHHHHhCCCe---EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CC
Confidence 34668899999999999853 566677789999888888999999999988777764 3455677899999998 32
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
. |++++++++++ ++++|++.++.||+|.+.|+++|.++|++ +|+++|+|++++.+.. .+..+.|+|++++
T Consensus 143 ~---d~e~l~~~l~~----~tk~V~~e~~~Np~~~v~di~~I~~la~~--~gi~livD~t~a~g~~-~~p~~~GaDivv~ 212 (437)
T PRK05613 143 D---DPESWQAAVQP----NTKAFFGETFANPQADVLDIPAVAEVAHR--NQVPLIVDNTIATAAL-VRPLELGADVVVA 212 (437)
T ss_pred C---CHHHHHHhCCc----cCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCeEEEECCCccccc-cChHHhCCCEEEe
Confidence 2 79999999874 56899999999999999999999999999 9999999999987654 3445678999999
Q ss_pred cCCCcccCC-Ccc-eEEEecHH
Q 015729 198 GSQKALSLP-TGM-GIVCASPK 217 (401)
Q Consensus 198 s~~K~l~g~-~g~-G~l~~~~~ 217 (401)
|.||+++|. -++ |+++.+++
T Consensus 213 S~~K~l~G~gd~~gG~vv~~~~ 234 (437)
T PRK05613 213 SLTKFYTGNGSGLGGVLIDGGK 234 (437)
T ss_pred eccceecCCCcceeEEEEecCc
Confidence 999999653 234 45554443
No 270
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.4e-20 Score=178.39 Aligned_cols=308 Identities=13% Similarity=0.049 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.+...++++.++++.|.+. .+.++||+.|+.+++.+++++||+|+++.+.|.+.. +.......|+++++++..
T Consensus 60 nPtv~~lE~~la~leg~~~---av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~-- 134 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVG---AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPN-- 134 (432)
T ss_pred CcHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCC--
Confidence 3568899999999999876 678999999999999989999999999998877654 233457789999999653
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
+|++++++++++ ++|+|++.++.||++.+.|+++|.++|++ +|+++++|++.+.+. ....-+.|+||++.|
T Consensus 135 --~d~~~l~~~I~~----~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~--~gi~livD~T~~tP~-~~~pl~~GADIvv~S 205 (432)
T PRK06702 135 --LTADEIVALAND----KTKLVYAESLGNPAMNVLNFKEFSDAAKE--LEVPFIVDNTLATPY-LCQAFEHGANIIVHS 205 (432)
T ss_pred --CCHHHHHHhCCc----CCeEEEEEcCCCccccccCHHHHHHHHHH--cCCEEEEECCCCchh-hCChhhcCCCEEEEc
Confidence 589999999985 56999999999999999999999999999 999999999975331 123446789999999
Q ss_pred CCCcccCCCcc--eEEEecHHHH-H-----HhccCCC---C-ccccch--HHHH--HHhhcCCCCCCCCcHHHHHHHHHH
Q 015729 199 SQKALSLPTGM--GIVCASPKAL-E-----ASKTAKS---V-RVFFDW--KDYI--KFYNLGTFWPYTPSIQLLYGLRAA 262 (401)
Q Consensus 199 ~~K~l~g~~g~--G~l~~~~~~~-~-----~~~~~~~---~-~~~~~~--~~~~--~~~~~g~~~~~~~~~~~~~a~~~a 262 (401)
.+|+++|..+. |+++.+..+. . .+..... . .+..+. ..+. ........+..+.++.... .+
T Consensus 206 ~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~---l~ 282 (432)
T PRK06702 206 TTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAY---IS 282 (432)
T ss_pred cccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHH---HH
Confidence 99999876542 5555333210 0 0000000 0 000000 0000 0000000112245553222 22
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccc-cCC-Cc------------cCCceeEEEEcCCCC-CHHHHHHHH
Q 015729 263 LDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNC-TQK-EE------------WFSDTVTAVIVPSHI-NSSEIVRRA 326 (401)
Q Consensus 263 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~-~~------------~~~~~~~~~~~~~~~-~~~~l~~~L 326 (401)
+..++ .++.+.++..+++..+.+.|++. .+... .+. ++ ...+.++.|.++.+. .+.++.+.|
T Consensus 283 ~rgL~--Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l 360 (432)
T PRK06702 283 NIGLE--TLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANV 360 (432)
T ss_pred HhccC--cHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhC
Confidence 22222 25678888899999999999985 43321 110 00 124568889984221 122333333
Q ss_pred HhhCCeEEccCCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 327 WQRYNLSLGLGLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 327 ~~~~~i~v~~g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
. -+.+.+..|.. ....+.+|+|+.. ||.|.+++-|+.+|+.
T Consensus 361 ~-l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 361 K-LATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALVG 424 (432)
T ss_pred c-cceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 2 22233222210 0013579998644 7888888888888753
No 271
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=9.4e-21 Score=180.55 Aligned_cols=304 Identities=16% Similarity=0.057 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.++++.|.+. .+++++|+.|+..++.+++++||+|+++...|.+.. +...+...|++++.++ +.
T Consensus 68 ~p~~~~Le~~lA~l~g~~~---av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~- 142 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVA---ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP- 142 (436)
T ss_pred CchHHHHHHHHHHHhCCCe---EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC-
Confidence 3556799999999999876 678889999999999999999999999988766554 2234456788888885 22
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
.|++++++++++ ++++|++.+++||+|.+.|+++|.++|++ +|+++|+|++++.+... ...++|+|+++.|
T Consensus 143 --~d~e~l~~ai~~----~tklV~ie~~sNp~G~v~Dl~~I~~la~~--~gi~liVD~t~a~~~~~-~pl~~GaDivv~S 213 (436)
T PRK07812 143 --DDLDAWRAAVRP----NTKAFFAETISNPQIDVLDIPGVAEVAHE--AGVPLIVDNTIATPYLI-RPLEHGADIVVHS 213 (436)
T ss_pred --CCHHHHHHhCCC----CCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCcccccC-CchhcCCCEEEEe
Confidence 289999998874 56999999999999999999999999999 99999999998866443 3335789999999
Q ss_pred CCCcccCCCc-ceEEEe-cHHH-HH--HhccCCC-Cccccc-------h-----HHHH-HHhhcCCCCCCCCcHHHHHHH
Q 015729 199 SQKALSLPTG-MGIVCA-SPKA-LE--ASKTAKS-VRVFFD-------W-----KDYI-KFYNLGTFWPYTPSIQLLYGL 259 (401)
Q Consensus 199 ~~K~l~g~~g-~G~l~~-~~~~-~~--~~~~~~~-~~~~~~-------~-----~~~~-~~~~~g~~~~~~~~~~~~~a~ 259 (401)
.||+++|..+ +|.+++ +... +. ....... ...+.. . +... .....| ...++.. +
T Consensus 214 ~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G----~~l~p~~---a 286 (436)
T PRK07812 214 ATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLG----SAISPFN---A 286 (436)
T ss_pred cccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcC----CCCCHHH---H
Confidence 9999965432 444444 3321 00 0000000 000000 0 0000 000112 2344421 2
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCcc-ccC-------------CCccCCceeEEEEcCCCC-CHHHHH
Q 015729 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKN-CTQ-------------KEEWFSDTVTAVIVPSHI-NSSEIV 323 (401)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~-------------~~~~~~~~~~~~~~~~~~-~~~~l~ 323 (401)
...++-+ .-+..+.++..+++..+.+.|++. +++. ..+ +.....+.++.|++..+. .+..+.
T Consensus 287 ~l~~rgl--~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~ 364 (436)
T PRK07812 287 FLIAQGL--ETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFV 364 (436)
T ss_pred HHHhcCc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHH
Confidence 2222211 126778999999999999999985 4321 111 000124668889984321 122333
Q ss_pred HHHHhhCCeEEccCCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 324 RRAWQRYNLSLGLGLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+.|. -+++.+..|.. ....+.+|||+.. ||.|.+++-|+.+|+.
T Consensus 365 ~~l~-l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~dl~~Al~~ 431 (436)
T PRK07812 365 NALT-LHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILADLEAGFAA 431 (436)
T ss_pred HhCC-cceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 3332 22222222211 0123569998654 6777777777777764
No 272
>PRK05939 hypothetical protein; Provisional
Probab=99.89 E-value=1.2e-20 Score=178.53 Aligned_cols=159 Identities=16% Similarity=0.182 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~ 119 (401)
.....++++.++++.|.+. .+.+++|+.|+..++.+++++||+|+++++.|.++. +.......|++++.++..
T Consensus 46 ~p~~~~lE~~la~leg~~~---~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~--- 119 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVG---TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT--- 119 (397)
T ss_pred CHHHHHHHHHHHHHhCCCe---EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC---
Confidence 4667899999999999876 456667799999999889999999999998776654 224456789999998753
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+. .++....|+|+++.|.
T Consensus 120 --d~e~l~~~l~~----~tklV~vesp~NptG~v~dl~~I~~la~~--~gi~livD~t~a~~~-~~~~~~~gaDivv~S~ 190 (397)
T PRK05939 120 --DVQNVAAAIRP----NTRMVFVETIANPGTQVADLAGIGALCRE--RGLLYVVDNTMTSPW-LFRPKDVGASLVINSL 190 (397)
T ss_pred --CHHHHHHhCCC----CCeEEEEECCCCCCCCHHhHHHHHHHHHH--cCCEEEEECCccccc-ccCccccCCEEEEecC
Confidence 79999999874 67999999999999999999999999999 999999999987653 3455567899999999
Q ss_pred CCcccCCC-cceEEEe
Q 015729 200 QKALSLPT-GMGIVCA 214 (401)
Q Consensus 200 ~K~l~g~~-g~G~l~~ 214 (401)
+|+++|.. .+|.+++
T Consensus 191 sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 191 SKYIAGHGNALGGAVT 206 (397)
T ss_pred eecccCCCCeEEEEEe
Confidence 99997643 2355444
No 273
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.89 E-value=2.1e-20 Score=178.75 Aligned_cols=162 Identities=18% Similarity=0.190 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......++++++++++|.+. .++++||++|+..++.+++++||+|+++.+.|.+.. +...+...|++++.++.+
T Consensus 55 ~~p~~~~le~~lA~l~g~~~---~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~- 130 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEGGVA---ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD- 130 (418)
T ss_pred CChhHHHHHHHHHHHhCCCe---EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC-
Confidence 34557799999999999754 788999999999999888999999999998776654 445667789999988753
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+.. ......++|+++.
T Consensus 131 ----d~~~l~~~l~~----~t~~V~le~p~NPtg~v~dl~~I~~la~~--~~i~livD~t~~~~~~-~~~l~~g~Divv~ 199 (418)
T TIGR01326 131 ----DPEEFEKAIDE----NTKAVFAETIGNPAINVPDIEAIAEVAHA--HGVPLIVDNTFATPYL-CRPIDHGADIVVH 199 (418)
T ss_pred ----CHHHHHHhcCc----CCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCchhhc-CCchhcCCeEEEE
Confidence 79999999874 56999999999999999999999999999 9999999999886532 2223457999999
Q ss_pred cCCCcccCC-CcceEEEecH
Q 015729 198 GSQKALSLP-TGMGIVCASP 216 (401)
Q Consensus 198 s~~K~l~g~-~g~G~l~~~~ 216 (401)
|.+|++++. -.+|++++++
T Consensus 200 S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 200 SATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CccccccCCccceEEEEEec
Confidence 999999642 2367777654
No 274
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=2.5e-20 Score=178.26 Aligned_cols=158 Identities=18% Similarity=0.187 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
....++++.++++.|.+. .+++++|++|+.+++.+++++||+|+++.+.|.+.. +...+...|++++.++.+
T Consensus 63 p~~~~le~~lA~l~g~~~---al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 136 (427)
T PRK05994 63 PTNAVLEERVAALEGGTA---ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD--- 136 (427)
T ss_pred ccHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC---
Confidence 457789999999999876 678899999999999889999999999999877654 344567789999988754
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+.. ......++|+++.|.
T Consensus 137 --d~~~l~~ai~~----~tklV~vesp~NptG~v~dl~~I~~la~~--~gi~livD~a~a~~~~-~~pl~~gaDivv~S~ 207 (427)
T PRK05994 137 --DPASFERAITP----RTKAIFIESIANPGGTVTDIAAIAEVAHR--AGLPLIVDNTLASPYL-IRPIEHGADIVVHSL 207 (427)
T ss_pred --CHHHHHHhcCc----CCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCcccccc-CCccccCCcEEEEcC
Confidence 78999998874 56999999999999999999999999999 9999999999986543 233457899999999
Q ss_pred CCcccCCCc-ceEEEe
Q 015729 200 QKALSLPTG-MGIVCA 214 (401)
Q Consensus 200 ~K~l~g~~g-~G~l~~ 214 (401)
+|+++|+.+ +|.+++
T Consensus 208 tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 208 TKFLGGHGNSMGGIIV 223 (427)
T ss_pred ccccCCCCCcEEEEEE
Confidence 999976543 343333
No 275
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=3e-20 Score=176.51 Aligned_cols=308 Identities=12% Similarity=0.081 Sum_probs=197.5
Q ss_pred CCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEcC
Q 015729 15 PGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLI 92 (401)
Q Consensus 15 ~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~ 92 (401)
.++..+.+++.+++.+..... .....+...++.+.+.+..+. +.++++++|++|++.++... ....++|++.+.
T Consensus 45 ~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~---~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~ 120 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWHVS-NLFTNSLQEEVASLLAENSAG---DLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQ 120 (377)
T ss_pred CCCHHHHHHHHHHHHhccccc-cccCCHHHHHHHHHHHhcCCC---CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 344444455555554421111 111123334444444444332 35899999999999998642 234467999988
Q ss_pred CcchHHHHHHHHHcCC------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----h
Q 015729 93 GQFSLLWIDQQQRLNF------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----L 156 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l 156 (401)
++|+..+..... .+. .+..++.+ |++++++.+. ++++++++..++++.|...+ +
T Consensus 121 ~~Hg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l 190 (377)
T PRK02936 121 SFHGRTFGTMSA-TGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFL 190 (377)
T ss_pred CcCCCcHHhhhc-cCCccccccCCCCCCCceEeCCC-----CHHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHH
Confidence 888765322221 121 11122211 7899999886 35799999999998887753 8
Q ss_pred HHHHHHhhhcCCCcEEEEecccccCcc---eeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
++|.++|++ +|+++|+|++|..... .+... ...+|+++ .+|.++++..+|+++.++++.+.+.....
T Consensus 191 ~~l~~l~~~--~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~~~~~~~~~~~~~~---- 262 (377)
T PRK02936 191 QEVQTLCKK--FGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIGKKELGTAFGPGSH---- 262 (377)
T ss_pred HHHHHHHHH--cCCEEEEeccccCCCcCchhhHHHhhCCCCcEEE--EcccccCCCccEEEEEcHHHHhhccCCCC----
Confidence 899999999 9999999999863211 11111 22356654 56999765557999999988776643210
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeE
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~ 309 (401)
...++.++..++++.++++.+..+ ...++..++.+++++.|++. ++....... ..+.++
T Consensus 263 --------------~~t~~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~--~~g~~~ 323 (377)
T PRK02936 263 --------------GSTFGGNPLAMAAAKEVLQVIKQP---SFLEEVQEKGEYFLQKLQEELEHLECVKNIR--GKGLMI 323 (377)
T ss_pred --------------CCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe--ecceEE
Confidence 112245667778888888876432 35567778888888888773 343322111 134578
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++.+++ +...+.+.|.++ ||.+.++ ..+++||++...++++++++++++|++++
T Consensus 324 ~i~~~~--~~~~~~~~l~~~-gv~v~~~----g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 324 GIECTE--EVAPVIEQLREE-GLLVLSA----GPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EEEecc--hHHHHHHHHHHC-CeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 888854 366788888766 9888754 24689999877789999999999998753
No 276
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.88 E-value=6e-20 Score=173.67 Aligned_cols=300 Identities=11% Similarity=0.121 Sum_probs=198.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChh-HHHHHHHhccC--C-CCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGT-GAWESALTNTL--S-PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t-~a~~~~~~~~~--~-~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (401)
...+..++++.+++++|.+.....++++|+| .++.+++.++- . +||.|+++...|.+.. +.+...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~--kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI--KAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH--HHHHHcCCeEEEeee
Confidence 4566889999999999998444478889999 57777765532 2 5899999988766654 678889999999995
Q ss_pred ---CCCCCCChHHHHHHHhccCCCCceEEEEEecC-CCcccccchHHHHHHhhhcCCCcEEEEecccccCccee-----c
Q 015729 116 ---DWGEGAKLDVLASKLAADTAHTIKAICIVHNE-TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-----R 186 (401)
Q Consensus 116 ---~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~-n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-----~ 186 (401)
+....+|++++++++++.+ .+..++++..++ +..|...|+++|.++|++ +|+++|+|+||+.++..+ .
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~-~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k--~gI~lIvDaAyg~~~~~~~~~~~~ 257 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIG-PDNILCVLSTTSCFAPRSPDDIEEIAKICAN--YDIPHIVNNAYGLQSNKYMELINK 257 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhcc-CCCEEEEEEcCCcCCCcchhCHHHHHHHHHH--cCCEEEEECcCcCcChhhhhhhhc
Confidence 3346789999999998532 133444544443 344578899999999999 999999999999765332 1
Q ss_pred cCcc-cceEEEecCCCcccCCCcceEEEe-cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHH
Q 015729 187 MDEW-GIDVALTGSQKALSLPTGMGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD 264 (401)
Q Consensus 187 ~~~~-~~di~~~s~~K~l~g~~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~ 264 (401)
..+. .+|++++|+||++..+.+.|++++ ++++.+.+.... .+. ..+.. ...+..++.
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y----------------~g~----~~~s~-~~~~~~~ll 316 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSY----------------PGR----ASASP-SLDVLITLL 316 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhc----------------cCC----CCChH-HHHHHHHHH
Confidence 1112 479999999999976666677767 566665554321 011 01111 123344444
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEcC--CCCCHHHHHHHHHhhCCeE----E
Q 015729 265 LIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVP--SHINSSEIVRRAWQRYNLS----L 334 (401)
Q Consensus 265 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~~~i~----v 334 (401)
.+..+++++..++..++++++.+.|+++ |-.+.....+ +.-+++.+. .+.+...+...|..+ +|. |
T Consensus 317 ~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n---~is~~~~~~~~~~~~~~~~g~~l~~~-~v~g~r~v 392 (444)
T TIGR03531 317 SLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPEN---PISSAMTLSTLKGKDPTMLGSMLYSR-RVTGPRVV 392 (444)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCC---ceeEEEecccccccCHHHHHHHHHhC-CCCCceee
Confidence 4455678899999999999999999874 6666543222 222334441 133566777777655 442 2
Q ss_pred ccCCCCC----------------CCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 335 GLGLNKV----------------AGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 335 ~~g~~~~----------------~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
.++.... ...|+-+.+.--.+++|+|.++++++++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 393 TNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred cCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 2332100 0113444444456899999999999875
No 277
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.88 E-value=5.4e-20 Score=175.66 Aligned_cols=296 Identities=16% Similarity=0.076 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC---CCCCeEEEEcCCcchHHHHHHHHHcC--------
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL---SPGDRIISFLIGQFSLLWIDQQQRLN-------- 107 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~---~~gd~vl~~~~~~~~~~~~~~~~~~g-------- 107 (401)
.+...++.++|.+...... ..+.|+++|++|++.++.- .. ....+|+....+||+.....+.....
T Consensus 116 ~~~~~~lAe~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 194 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFM 194 (442)
T ss_pred CHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCC
Confidence 4555678888888765433 3589999999999998842 22 12457888888888876333221100
Q ss_pred ---CcEEEEeCCCCCCCChHHHHHHHhc--cCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEeccc
Q 015729 108 ---FNVDVVESDWGEGAKLDVLASKLAA--DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 108 ---~~~~~v~~~~~~~~d~~~le~~~~~--~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
..+..++.+ |.+.+++.++. ...+++.++++.......|...| ++++.++|++ +|+++|+|+++
T Consensus 195 p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~--~g~llI~DEV~ 267 (442)
T TIGR03372 195 PLLPGFHHVAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE--FGALLILDEVQ 267 (442)
T ss_pred CCCCCCEEeCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH--cCCEEEEeecc
Confidence 012223222 67777777753 11146889999998888899887 8999999999 99999999998
Q ss_pred cc-Ccc--eecc--CcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCc
Q 015729 179 SI-CAI--DFRM--DEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (401)
Q Consensus 179 ~~-~~~--~~~~--~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (401)
.. |-. .+.. ....+|++++ .|.++++ .++|.++.++++.+.+... . +.-++ +++.+
T Consensus 268 tG~GRtG~~~a~e~~gv~PDivt~--gK~lg~G~~Pigavv~~~~i~~~~~~~---~-----------~~~~~--T~~gn 329 (442)
T TIGR03372 268 TGMGRTGKMFACEHEGVQPDILCL--AKALGGGVMPIGATIATEAVFSVLFDN---P-----------FLHTT--TFGGN 329 (442)
T ss_pred cCCCccccchhhhhcCCCCCeeee--hhhhcCCcccceEEEecHHHHHhhhcc---C-----------ccccC--CCCCC
Confidence 53 211 1112 2234788775 5999776 4688888998887766321 0 00011 23346
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCceeEEEEcCCCCCHHHHHHHHHhh
Q 015729 253 IQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (401)
Q Consensus 253 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (401)
+..+++..++++.+.+++ ..++.++..+++++.|+++ .++ .... ....+.++.+++.+......+.+.|+++
T Consensus 330 p~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~--vRG~Gl~~giel~~~~~~~~i~~~l~~~ 404 (442)
T TIGR03372 330 PLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIE--ARGKGLLMAIEFRDNEIGYAFAKELFQQ 404 (442)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEE--EecceEEEEEEeCChHHHHHHHHHHHHC
Confidence 677888899999887754 5667788888888888875 233 2211 1234567778874332345788888876
Q ss_pred CCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 330 YNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 330 ~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
||.+..... .++.+||.+...+|++|+|++++++++++
T Consensus 405 -Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 405 -NILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred -CcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 998864322 24689999988999999999999998763
No 278
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=5.8e-20 Score=176.67 Aligned_cols=305 Identities=15% Similarity=0.083 Sum_probs=204.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCC--C-CCeEEEEcCCcchHHHHHHHHHcCCcEE--EE
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLS--P-GDRIISFLIGQFSLLWIDQQQRLNFNVD--VV 113 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~--~-gd~vl~~~~~~~~~~~~~~~~~~g~~~~--~v 113 (401)
.+...++.++|.+...... ..+.|+++|++|++.++.. ... + ..+|+....+||+.....+.....-... +.
T Consensus 123 ~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 201 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFM 201 (459)
T ss_pred CHHHHHHHHHHHHhCCCCC-CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCC
Confidence 4556677888887764333 3589999999999998843 222 2 3468888888888763222221110000 01
Q ss_pred eCCCCC----CCChHHHHHHHhcc--CCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc
Q 015729 114 ESDWGE----GAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI 183 (401)
Q Consensus 114 ~~~~~~----~~d~~~le~~~~~~--~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~ 183 (401)
+..++. -.|.+++++.++.. ..+++.++++.......|.+.| ++++.++|++ +|+++|+||++.....
T Consensus 202 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~--~g~llI~DEV~tG~GR 279 (459)
T PRK11522 202 PLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE--FGALLILDEVQTGMGR 279 (459)
T ss_pred CCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH--cCCEEEeccceecCCc
Confidence 111100 01678888887631 1246789999999988999887 8999999999 9999999999863211
Q ss_pred -----eeccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHH
Q 015729 184 -----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLY 257 (401)
Q Consensus 184 -----~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 257 (401)
.++.....+|+++++ |.++++ .++|.++.+++..+.+... . +.-++ ++..++..++
T Consensus 280 tG~~~a~e~~gv~PDivt~g--K~lggG~~Pigav~~~~~i~~~~~~~---~-----------~~~~~--T~~gnp~~~A 341 (459)
T PRK11522 280 TGKMFACEHENVQPDILCLA--KALGGGVMPIGATIATEEVFSVLFDN---P-----------FLHTT--TFGGNPLACA 341 (459)
T ss_pred cchhhhhhccCCCCCEEEec--hhhhCCCccceeEEEcHHHHHHhccC---C-----------cccCC--CCCCCHHHHH
Confidence 111222347888665 999776 4689999999887755321 0 00011 2334677788
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEE
Q 015729 258 GLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL 334 (401)
Q Consensus 258 a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v 334 (401)
+..++++.+.++ +..++..++.++|++.|+++ .++ .+.. ....+.++.+.+.+......+.+.|+++ ||.+
T Consensus 342 aala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~--VrG~Gl~~giel~~~~~~~~i~~~l~~~-Gvl~ 415 (459)
T PRK11522 342 AALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQE--ARGKGMLMAIEFVDNEIGYNFASEMFRQ-RVLV 415 (459)
T ss_pred HHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceee--EEeceeEEEEEecCchHHHHHHHHHHHC-CeEE
Confidence 889999988765 36788899999999999886 343 2221 1134567778774322345788888876 9998
Q ss_pred ccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 335 GLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 335 ~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
.+... .++.+|+.+...+|++|+|+++++++++++++.
T Consensus 416 ~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 416 AGTLN--NAKTIRIEPPLTLTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred EecCC--CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 64421 257899998889999999999999999997754
No 279
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=1.8e-20 Score=178.73 Aligned_cols=305 Identities=13% Similarity=0.080 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (401)
.....++++.|+++.|.+. .+++++|++|+..++.+++++||+|+++.+.|.+.. +.......|+++..++.
T Consensus 57 ~pt~~~Le~~lA~l~g~~~---~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~--- 130 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVG---ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH--- 130 (425)
T ss_pred CchHHHHHHHHHHHhCCCc---eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC---
Confidence 3556799999999998654 678889999999999999999999999998777544 22222335666666653
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
.|++++++++++ ++++|++++++||+|.+.|+++|.++|++ +|+++|+|++++.+... .....++|+++.|
T Consensus 131 --~d~e~le~ai~~----~tklV~lesp~NPtG~v~dl~~I~~la~~--~~i~vVvD~a~a~~~~~-~p~~~gaDivv~S 201 (425)
T PRK06084 131 --DDIAALEALIDE----RTKAVFCESIGNPAGNIIDIQALADAAHR--HGVPLIVDNTVATPVLC-RPFEHGADIVVHS 201 (425)
T ss_pred --CCHHHHHHHhcc----CCcEEEEeCCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCcccccC-ChhhcCCCEEEEC
Confidence 389999999974 56999999999999999999999999999 99999999999866442 2335689999999
Q ss_pred CCCcccCCC-cc-eEEEecHHH-HHH----hccCCC-Cccccch--HH------HH----HHhhcCCCCCCCCcHHHHHH
Q 015729 199 SQKALSLPT-GM-GIVCASPKA-LEA----SKTAKS-VRVFFDW--KD------YI----KFYNLGTFWPYTPSIQLLYG 258 (401)
Q Consensus 199 ~~K~l~g~~-g~-G~l~~~~~~-~~~----~~~~~~-~~~~~~~--~~------~~----~~~~~g~~~~~~~~~~~~~a 258 (401)
.+|+++|+. .+ |+++.++.. ... ...... ...++.+ .. .. .....+. ....+...++
T Consensus 202 ~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--g~~l~~~~a~- 278 (425)
T PRK06084 202 LTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNM--GAALSPFNAF- 278 (425)
T ss_pred chhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhc--CCCCCHHHHH-
Confidence 999997543 23 555543321 111 100000 0001100 00 00 0001111 2234443222
Q ss_pred HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCC-Cc-----------cC-CceeEEEEcCCCC-CHHHH
Q 015729 259 LRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLK-NCTQK-EE-----------WF-SDTVTAVIVPSHI-NSSEI 322 (401)
Q Consensus 259 ~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-~~-----------~~-~~~~~~~~~~~~~-~~~~l 322 (401)
..+..+ ..+..+.++..+++..+.+.|++. ++. +..+. ++ .. .+.++.|++..+. ...++
T Consensus 279 --l~lrgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f 354 (425)
T PRK06084 279 --LILQGL--ETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGARF 354 (425)
T ss_pred --HHHcCc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHH
Confidence 222211 136778899999999999999985 432 11110 00 02 3568889984321 12233
Q ss_pred HHHHHhhCCeEEccCCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 323 VRRAWQRYNLSLGLGLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.|. -+++.+..|.. ....+.+|||+.. ||.|.+++-|+.+|+.
T Consensus 355 ~~~l~-l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed~~dLi~dl~~Al~~ 422 (425)
T PRK06084 355 IDALK-LVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EHIDDIIADLAQALDA 422 (425)
T ss_pred HHhCC-cceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHh
Confidence 33332 22222222211 0123569998644 7778888888777753
No 280
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.88 E-value=1.1e-20 Score=176.95 Aligned_cols=228 Identities=19% Similarity=0.146 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHH-HHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQ-QRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~-~~~g~~~~~v~~~~~ 118 (401)
.....+++++++++.|.+. +++++||++|+.+++ .++++||+|+++.+.|.+.. +.... ...+.++..
T Consensus 53 ~p~~~~le~~lA~leg~~~---~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~------ 122 (364)
T PRK07269 53 NPTRAKLEETLAAIESADY---ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY------ 122 (364)
T ss_pred CccHHHHHHHHHHHhCCCe---EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe------
Confidence 4557899999999998654 899999999999888 46799999999988655443 21221 211222111
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEec
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
..|++++++++++ ++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... ..-..++|++++|
T Consensus 123 -~~d~~~l~~~i~~----~TklV~lesP~NPtg~~~di~~I~~la~~--~gi~vvvD~t~~~~~~~-~pl~~gaDivv~S 194 (364)
T PRK07269 123 -ANTEEELIAAIEE----DTDIVYIETPTNPLMVEFDIEKVAKLAHA--KGAKVIVDNTFYSPIYQ-RPIELGADIVLHS 194 (364)
T ss_pred -cCCHHHHHHhcCc----CceEEEEECCCCCCCeeeCHHHHHHHHHH--cCCEEEEECCCcccccC-CchhhCCcEEEec
Confidence 2479999999874 56999999999999999999999999999 99999999997654322 2335689999999
Q ss_pred CCCcccCCCc--ceEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHH
Q 015729 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (401)
Q Consensus 199 ~~K~l~g~~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 275 (401)
.+|+++|... .|+++++ +++.+++... .. ..| ...+...++-...+++ .++.++
T Consensus 195 ~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~-------------~~-~~G----~~~s~~~a~l~~~~L~-----tL~~r~ 251 (364)
T PRK07269 195 ATKYLSGHNDVLAGVVVTNDLELYEKLFYN-------------LN-TTG----AVLSPFDSYLLMRGLK-----TLSLRM 251 (364)
T ss_pred CceeccCCCcccceEEEeCcHHHHHHHHHH-------------HH-HhC----CCCCHHHHHHHHcCCC-----cHHHHH
Confidence 9999976543 3777775 4554544311 00 012 1234432222222222 367788
Q ss_pred HHHHHHHHHHHHHHHHc-CCcc-ccCCCccCCceeEEEEc
Q 015729 276 ERHRRLGKATRLAVEAW-GLKN-CTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~ 313 (401)
++.+++++.+.++|++. ++.. ..+ + .+.+++|.+
T Consensus 252 ~~~~~na~~~a~~L~~~p~v~~v~yp--g--~gg~~sf~~ 287 (364)
T PRK07269 252 ERSTANAQEVVAFLKKSPAVKEVLYT--G--KGGMISFKV 287 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEeCC--C--cCcEEEEEE
Confidence 99999999999999875 4332 222 1 345777887
No 281
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-19 Score=173.37 Aligned_cols=330 Identities=16% Similarity=0.135 Sum_probs=211.8
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeE
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRI 87 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~v 87 (401)
+.+++.++..+.+++.+.+.+....+......+...++-++|.+..+... ..+.|+++|++|++.++.. ......+|
T Consensus 52 ~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~tgr~~i 130 (443)
T PRK08360 52 VQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDN-PKVSFGLSGSDANDGAIKFARAYTKRRKI 130 (443)
T ss_pred hcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCC-CEEEEcCCHHHHHHHHHHHHHHhcCCCeE
Confidence 33444444444444444444321111111223445677788888775432 3599999999999998843 23445678
Q ss_pred EEEcCCcchHHHHHHHHHcCC------------cEEEEeCCCCCC------------CChHHHHHHHhcc-CCCCceEEE
Q 015729 88 ISFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEG------------AKLDVLASKLAAD-TAHTIKAIC 142 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~------------~d~~~le~~~~~~-~~~~~~~i~ 142 (401)
+....+||+.....+.. .+. .+..++.+.... -+.+.+++.+... ..+++++|+
T Consensus 131 i~~~~~yHG~t~~a~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi 209 (443)
T PRK08360 131 LSYLRSYYGSTYGAMSL-TGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALF 209 (443)
T ss_pred EEEeCCcCCcCHHHHHh-cCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEE
Confidence 88888888875322221 111 123333322100 1234566666532 125789999
Q ss_pred EEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCCCcceEEE
Q 015729 143 IVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLPTGMGIVC 213 (401)
Q Consensus 143 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~ 213 (401)
+...++++|.+.+ +++|.++|++ +|+++|+|++|..... . .......+|++++ +|.++++.++|+++
T Consensus 210 ~eP~~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK~l~~G~pigav~ 285 (443)
T PRK08360 210 AEPIQGDAGMIVPPEDYFKKLKKILDE--HGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITL--GKPLGGGLPISATI 285 (443)
T ss_pred ECCccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCccchhhhhcCCCCCEEEe--cccccCCceeEEEE
Confidence 9988899998876 7889999999 9999999999873211 1 1111234677765 69997666689999
Q ss_pred ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
+++++.+.+.... ..+.++.++..++++.++++.+.+.+ ..++.+++.+++++.|+++
T Consensus 286 ~~~~i~~~~~~~~------------------~~~T~~~~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~ 344 (443)
T PRK08360 286 GRAEIMDSLPPLA------------------HAFTLSGNPVASAAALAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMK 344 (443)
T ss_pred EcHHHHhhhcCCC------------------CCCCCCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHH
Confidence 9999877765321 11133455666788888888887653 6778888888888888875
Q ss_pred -CCccccCCCccCCceeEEEEcCCC--------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHH
Q 015729 293 -GLKNCTQKEEWFSDTVTAVIVPSH--------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCL 363 (401)
Q Consensus 293 -g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~ 363 (401)
..++... ....+.++.+++.+. ..+..+...|.++ ||.+.+. .++.+|+.+...+|++|+|+++
T Consensus 345 ~~~~~v~~--vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lr~~P~l~~t~~~id~~~ 417 (443)
T PRK08360 345 KKHELIGD--VRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWEL-GLIVTFF----SGNVLRIQPPLTIEKEVLDEGL 417 (443)
T ss_pred HhCCCeee--eeccceEEEEEEecCCcccCccHHHHHHHHHHHHHC-CeEEeec----CCCEEEEeCCCCCCHHHHHHHH
Confidence 3443321 123456677766211 0134677778766 9887532 2578999998899999999999
Q ss_pred HHHHHHHHhc
Q 015729 364 AGVEMILKDV 373 (401)
Q Consensus 364 ~~i~~~l~~~ 373 (401)
++++++++++
T Consensus 418 ~~l~~~l~~~ 427 (443)
T PRK08360 418 DILEEAIEDV 427 (443)
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 282
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.87 E-value=4e-20 Score=172.85 Aligned_cols=290 Identities=18% Similarity=0.128 Sum_probs=189.0
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCC
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~ 116 (401)
........+++.|+++.|.+. ++++++|..|+..++.+++++||+|+++...|.+.. ........|+++.+++..
T Consensus 52 ~gnPt~~~le~~la~Le~g~~---a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~ 128 (386)
T PF01053_consen 52 YGNPTVRALEQRLAALEGGED---ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPT 128 (386)
T ss_dssp TC-HHHHHHHHHHHHHHT-SE---EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTT
T ss_pred cccccHHHHHHHHHHhhcccc---eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCch
Confidence 345677899999999998754 788899999999999999999999999999877765 444567789999988754
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCC-cEEEEecccccCcceeccCcccceEE
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP-ALFLVDGVSSICAIDFRMDEWGIDVA 195 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~-~~li~D~a~~~~~~~~~~~~~~~di~ 195 (401)
|++++++++++ ++++|++..|.||+..+.|+++|.++|++ +| +++++|.+.+.+ ..++.-.+|+|++
T Consensus 129 -----d~~~l~~~l~~----~t~~v~~EspsNP~l~v~Dl~~i~~~a~~--~g~~~~vVDnT~atp-~~~~pL~~GaDiv 196 (386)
T PF01053_consen 129 -----DLEALEAALRP----NTKLVFLESPSNPTLEVPDLEAIAKLAKE--HGDILVVVDNTFATP-YNQNPLELGADIV 196 (386)
T ss_dssp -----SHHHHHHHHCT----TEEEEEEESSBTTTTB---HHHHHHHHHH--TTT-EEEEECTTTHT-TTC-GGGGT-SEE
T ss_pred -----hHHHHHhhccc----cceEEEEEcCCCcccccccHHHHHHHHHH--hCCceEEeeccccce-eeeccCcCCceEE
Confidence 89999999985 66999999999999999999999999999 87 999999997654 2334456789999
Q ss_pred EecCCCcccCCCc--ceEEEecH--HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcH
Q 015729 196 LTGSQKALSLPTG--MGIVCASP--KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGL 271 (401)
Q Consensus 196 ~~s~~K~l~g~~g--~G~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~ 271 (401)
+.|.+|+++|... .|.+++++ ++.+++... ....|. +.++.. +...++-+ .-+
T Consensus 197 v~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~--------------~~~~G~----~~~p~d---a~ll~rgl--~Tl 253 (386)
T PF01053_consen 197 VHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF--------------RRLLGA----TLSPFD---AWLLLRGL--RTL 253 (386)
T ss_dssp EEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH--------------HHHHT-----B--HHH---HHHHHHHH--TTH
T ss_pred EeeccccccCCcceeeEEEEECchhhhhhhhcch--------------hhhcCc----cchHHH---HHHHhcCC--CcH
Confidence 9999999976543 37888765 554444321 011121 243322 22222211 126
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCceeEEEEcCCCC-CHHHHHHHHHhhCCeEEcc
Q 015729 272 ENVIERHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGL 336 (401)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~~i~v~~ 336 (401)
.-++++..++++.+.+.|++. .++ +.-+ .+. ...+.++.|+++++. ....+.+.|. -+.+.+..
T Consensus 254 ~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~-l~~~~~Sl 332 (386)
T PF01053_consen 254 PLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALK-LFSIAPSL 332 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-S-SSEESSS-
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhh-hHhhhhhc
Confidence 778889999999999999974 322 1111 110 123348899995432 2334444442 11111122
Q ss_pred CCC-----------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 337 GLN-----------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 337 g~~-----------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
|.. ...++.+|||+.. ||.+.+++.|+.+|+
T Consensus 333 Gg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 333 GGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred CCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 211 1123569998654 778888888887764
No 283
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=3e-19 Score=172.10 Aligned_cols=300 Identities=14% Similarity=0.096 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHH-------cCC---
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQR-------LNF--- 108 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~-------~g~--- 108 (401)
.+...++.+++.+.+.......+.|+++|++|++.++.- .....++|+....+||+.....+... .+.
T Consensus 98 ~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~ 177 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPF 177 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCC
Confidence 345557788888877543223589999999999998852 23344789999999998873332211 110
Q ss_pred --cEEEEeCCCCCC------CC--------hHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCC
Q 015729 109 --NVDVVESDWGEG------AK--------LDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRH 168 (401)
Q Consensus 109 --~~~~v~~~~~~~------~d--------~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~ 168 (401)
.+..++.....+ .+ .+.+++.+. + +++++|++...+...|.+.+ +++|.++|++ +
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~-~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~--~ 252 (443)
T PRK06058 178 APEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--A-DNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRE--N 252 (443)
T ss_pred CCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC--C-CceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH--c
Confidence 122232211110 00 122223222 1 46889998887777787764 7899999999 9
Q ss_pred CcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 169 PALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 169 ~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
|+++|.|+++..... .+ ......+|+++++ |.++++.++|.+++++++.+.+....
T Consensus 253 gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~Pi~av~~~~~i~~~~~~~~----------------- 313 (443)
T PRK06058 253 GVVFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KGIAGGLPLSAVTGRAEIMDAPHPGG----------------- 313 (443)
T ss_pred CCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--ccccCCCccEEEEEcHHHHhhccCCC-----------------
Confidence 999999999863321 11 2122347888886 99987777899999999877664321
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC---C-
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH---I- 317 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~---~- 317 (401)
...+++.++..+++..++++.+.++ +..++..+..+++.+.|+++ ...+... ....+.++.+.+... .
T Consensus 314 -~~~T~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrg~G~~~~i~~~~~~~~~~ 387 (443)
T PRK06058 314 -LGGTYGGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIGD--VRGRGAMIAIELVKPGTTEP 387 (443)
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEe--eeccceEEEEEEecCCCCCC
Confidence 1113346667788888999888765 36777788888899999875 2333221 113445666666211 1
Q ss_pred C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 318 N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 318 ~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+ ...+.+.|.++ ||.+.++... ++++|+.+...+|++|+|+++++++++++++
T Consensus 388 ~~~~~~~l~~~~~~~-Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 388 DAELTKALAAAAHAA-GVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred cHHHHHHHHHHHHHC-CeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 1 23566666666 9998765221 5689998888899999999999999998753
No 284
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.87 E-value=1.3e-19 Score=173.39 Aligned_cols=300 Identities=20% Similarity=0.171 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHH-------cC-----
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQR-------LN----- 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~-------~g----- 107 (401)
+...++-+++.+.........+.|+++|++|++.++.. ......+|+....+||+.....+... .+
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~ 162 (421)
T PRK09792 83 ESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFP 162 (421)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCC
Confidence 44457777787766433224589999999999998843 23344678999888888763222211 01
Q ss_pred CcEEEEeCCCCC-CC----ChHHHHHHHhcc-CCCCceEEEEEecCCCccccc-c---hHHHHHHhhhcCCCcEEEEecc
Q 015729 108 FNVDVVESDWGE-GA----KLDVLASKLAAD-TAHTIKAICIVHNETATGVTN-N---LSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 108 ~~~~~v~~~~~~-~~----d~~~le~~~~~~-~~~~~~~i~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~~~li~D~a 177 (401)
..+..++.+.+. .+ +++.+++.+.+. ..+++++|++...++++|... | +++|.++|++ +|+++|+|++
T Consensus 163 ~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~--~g~llI~DEv 240 (421)
T PRK09792 163 GSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDE--HGIVMIADEV 240 (421)
T ss_pred CCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEecc
Confidence 012333332211 11 347888887631 114689999999999999876 5 7889999999 9999999999
Q ss_pred cccCcc---eeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCc
Q 015729 178 SSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (401)
Q Consensus 178 ~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (401)
+..... ++..+ ...+|++++ +|.++++.++|++++++++.+.+..... +. +++.+
T Consensus 241 ~tg~gr~G~~~a~~~~~~~pDi~t~--gK~l~~G~pigav~~~~~i~~~~~~~~~----------------~~--T~~gn 300 (421)
T PRK09792 241 QSGFARTGKLFAMDHYADKPDLMTM--AKSLAGGMPLSGVVGNANIMDAPAPGGL----------------GG--TYAGN 300 (421)
T ss_pred ccCCCCCCchhHHHhcCCCCcEEEe--ehhhcCCCceEEEEEcHHHHhccCCCCc----------------CC--CCCCC
Confidence 774321 11222 234676655 5999877789999999998776643211 11 23456
Q ss_pred HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC-------CCHHHHH
Q 015729 253 IQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH-------INSSEIV 323 (401)
Q Consensus 253 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~ 323 (401)
+..+++..++++.+.+. +..++.++..+++.+.|+++ .++... .....+.+++++++++ .....+.
T Consensus 301 pl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~--~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~ 375 (421)
T PRK09792 301 PLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIA--AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQ 375 (421)
T ss_pred HHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcc--eecccceEEEEEecCCccCCcchHHHHHHH
Confidence 66677888888888764 35566667777777777764 233222 1223467888988543 1235677
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 324 ~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.+.++ ||.+.+.. ..++.+|+.+...++++|++++++++.++++
T Consensus 376 ~~~~~~-Gv~i~~~g--~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 376 QRALAQ-GLLLLTCG--AYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHC-CcEEeecC--CCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 777766 98885321 1257899987777999999999999999875
No 285
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.87 E-value=3.7e-20 Score=173.46 Aligned_cols=297 Identities=17% Similarity=0.155 Sum_probs=193.5
Q ss_pred CcccccCCCcCChHHHHHHHccC----cCC-CCCccHHHHHHHHHHHHHHHhcCCC------CceEEecCChhHHHHHHH
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRN----NED-YRSPAVPALTKTLLEDIKKIFKTTS------GTPFLIPTTGTGAWESAL 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~----~~~-~~~~~~~~~~~~l~~~la~~~g~~~------~~~i~~~~g~t~a~~~~~ 77 (401)
+.+.+.+++.....-+-+.+... ... ..++....+..++.+.+++++|.+. ...-++|+|||+++..++
T Consensus 41 ~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al 120 (373)
T PF00282_consen 41 RFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYAL 120 (373)
T ss_dssp TBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHH
T ss_pred hHhhhccCCccHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHH
Confidence 44555555544443333444442 211 2345566778899999999999982 134789999999998766
Q ss_pred hcc----C----CC-----C-CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCC--CceEE
Q 015729 78 TNT----L----SP-----G-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAH--TIKAI 141 (401)
Q Consensus 78 ~~~----~----~~-----g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~--~~~~i 141 (401)
.+. . .. + -.|++++..|++. .+.+...|+.++.|++++++++|+++|+++++++... .|-+|
T Consensus 121 ~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~--~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~v 198 (373)
T PF00282_consen 121 LAARERALPRSKAKGVEEIPKPVIYVSEQAHYSI--EKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAV 198 (373)
T ss_dssp HHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THH--HHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHhhhhhhcccccccccccccccccccHH--HHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceee
Confidence 321 1 01 1 2466666677766 4788999999999999999999999999998764311 24577
Q ss_pred EEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcce------eccCcccceEEEecCCCcccCCCcceEEEec
Q 015729 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID------FRMDEWGIDVALTGSQKALSLPTGMGIVCAS 215 (401)
Q Consensus 142 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~ 215 (401)
+.+.+++.+|.+.|+++|.++|++ +++|+|+|+|++...+. ....-.++|.++.++||+++.|.++|+++++
T Consensus 199 vat~Gtt~~Ga~D~l~~i~~i~~~--~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r 276 (373)
T PF00282_consen 199 VATAGTTNTGAIDPLEEIADICEK--YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVR 276 (373)
T ss_dssp EEEBS-TTTSBB-SHHHHHHHHHH--CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEES
T ss_pred eccCCCcccccccCHHHHhhhccc--cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEee
Confidence 888899999999999999999999 99999999998863321 1222246899999999999999999999988
Q ss_pred HHH-HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-C
Q 015729 216 PKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G 293 (401)
Q Consensus 216 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g 293 (401)
++. +.........+..............+.+....+--.....++.+++.+..+|+.+..++..++++++.+.|++. +
T Consensus 277 ~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~ 356 (373)
T PF00282_consen 277 DKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPR 356 (373)
T ss_dssp SGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred cccchHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 764 33222111111110000000011111111111224566788999999989999999999999999999999997 6
Q ss_pred CccccCCCccCCceeEEEEc
Q 015729 294 LKNCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~ 313 (401)
+++..+. ...+++|++
T Consensus 357 ~el~~~~----~~~~vcFr~ 372 (373)
T PF00282_consen 357 FELVNEP----DLNIVCFRY 372 (373)
T ss_dssp EEESSTT----SSSEEEEEE
T ss_pred EEEEcCC----CceEEEEEe
Confidence 7776532 224666664
No 286
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.87 E-value=2e-19 Score=171.71 Aligned_cols=323 Identities=15% Similarity=0.132 Sum_probs=204.4
Q ss_pred CChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCC--CCceEEe-cCChhHHHHHHHhc--cCCCCCeEEE
Q 015729 19 HIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTT--SGTPFLI-PTTGTGAWESALTN--TLSPGDRIIS 89 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~--~~~~i~~-~~g~t~a~~~~~~~--~~~~gd~vl~ 89 (401)
.-+|.+.+++.++... +......+...++.++|.+.+..+ ....+.| +++|++|++.++.. .....++|+.
T Consensus 51 h~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~ 130 (412)
T TIGR02407 51 HNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVS 130 (412)
T ss_pred CCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEE
Confidence 3445566555553321 111112344557777777764222 2223556 58999999998843 2344468999
Q ss_pred EcCCcchHHHHHHHHH--------cC---CcEEEEeCCCCCC---CChHHHHHHHhccC--CCCceEEEEEecCCCcccc
Q 015729 90 FLIGQFSLLWIDQQQR--------LN---FNVDVVESDWGEG---AKLDVLASKLAADT--AHTIKAICIVHNETATGVT 153 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~--------~g---~~~~~v~~~~~~~---~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~ 153 (401)
...+||+.....+... .+ ..+..+|.+.-.. -+++.+++.+++.. .+++.+|++...++..|..
T Consensus 131 ~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~ 210 (412)
T TIGR02407 131 FTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGIN 210 (412)
T ss_pred ECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCc
Confidence 9999998863322211 11 1223333321000 14677888886421 1357899999999999986
Q ss_pred cc----hHHHHHHhhhcCCCcEEEEecccc-cCc----ceeccCcccceEEEecCCCcccC-CCcceEEEecHHHHHHhc
Q 015729 154 NN----LSKVRKLLDEYRHPALFLVDGVSS-ICA----IDFRMDEWGIDVALTGSQKALSL-PTGMGIVCASPKALEASK 223 (401)
Q Consensus 154 ~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~----~~~~~~~~~~di~~~s~~K~l~g-~~g~G~l~~~~~~~~~~~ 223 (401)
.+ +++|.++|++ +|+++|+|+++. +|- ..++.....+|+++++ |++++ +.++|+++++++. +.+.
T Consensus 211 ~~~~~~l~~l~~lc~~--~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~--K~lg~~G~pigav~~~~~~-~~~~ 285 (412)
T TIGR02407 211 VASDEWLQRLEKLCRR--HDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLPLALTLIKPEL-DVWK 285 (412)
T ss_pred cCCHHHHHHHHHHHHH--cCCEEEEechhhCCCccchhHHhcccCCCCCEEEec--hhccCCccceeEEEEchhh-hccC
Confidence 53 7889999999 999999999986 221 1223234458888765 99976 6668999998875 4332
Q ss_pred cCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH-HHHhcHHHHHHHHHHHHHHHHHHHHHc--CCc-cccC
Q 015729 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL-IFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQ 299 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~-~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~ 299 (401)
... .++ .++.++..+++..++++. +.+ .+..++..+..+++++.|+++ .+. ...
T Consensus 286 ~~~----------------~~~--T~~gnpl~~aaa~a~l~~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~- 343 (412)
T TIGR02407 286 PGE----------------HNG--TFRGNNLAFVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDRIVAEYPELIK- 343 (412)
T ss_pred CCc----------------cCC--CCCccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhhCCCceE-
Confidence 110 011 234556666777888885 443 246677777777777777764 222 111
Q ss_pred CCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 300 KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.....+.++++++++......+.+.+.++ ||.+.+... .++.+|+.+...+|++|++++++++++++++
T Consensus 344 -~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~-Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 344 -QVRGRGLMQGIECGDGDLAGKIAKAAFEN-GLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred -eeecceeEEEEEecChHHHHHHHHHHHHC-CCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 12235678889886543456788888876 998865421 2568999999999999999999999998864
No 287
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.87 E-value=3.3e-19 Score=173.02 Aligned_cols=306 Identities=15% Similarity=0.110 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-------CC-CCeEEEEcCCcchHHHHHHHHHcCCc---
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDRIISFLIGQFSLLWIDQQQRLNFN--- 109 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-------~~-gd~vl~~~~~~~~~~~~~~~~~~g~~--- 109 (401)
.+...++.++|.+.+....-..+.|+++|++|++.++.... .+ .++|+..+.+||+.....+. ..|..
T Consensus 132 ~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~s-lsg~~~~~ 210 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISAS-LSGLPALH 210 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhh-ccCChhhc
Confidence 34566788888777543222358999999999999885421 12 36788888888887643221 11211
Q ss_pred ---------EEEEeCCCCCC-------------CChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHh
Q 015729 110 ---------VDVVESDWGEG-------------AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLL 163 (401)
Q Consensus 110 ---------~~~v~~~~~~~-------------~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~ 163 (401)
+..++.+...+ ...+++++.+.+...+++.+|++.......|.+.| ++++.++|
T Consensus 211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc 290 (504)
T PLN02760 211 QKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVL 290 (504)
T ss_pred cCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 22233221110 01245777664322246889999988888899887 89999999
Q ss_pred hhcCCCcEEEEecccc-cCcc--ee--ccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 164 DEYRHPALFLVDGVSS-ICAI--DF--RMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~-~~~~--~~--~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
++ +|+++|+||++. +|-. .+ +.....+|+++++ |.++++. ++|.+++++++.+.+.......
T Consensus 291 ~~--~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlg--K~lggG~~PigAv~~~~~i~d~~~~~~~~~-------- 358 (504)
T PLN02760 291 KK--YDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLA--KALSSAYMPIGAVLVSPEISDVIHSQSNKL-------- 358 (504)
T ss_pred HH--cCCEEEecchhhCCcccchhhHHHhcCCCCcEEEec--ccccCCccccceEeecHHHHhhhhcccccc--------
Confidence 99 999999999994 4321 11 2222347887776 9997653 6788999999887764321000
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
..+.-+. +++.++..+++..++++.+.+++ ..++.+++.++|++.|+++ ...+.. .....+.++.+.+.+.
T Consensus 359 -~~~~h~~--T~~gnPl~~Aaala~Le~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~--~vrG~Gl~~gie~~~~ 430 (504)
T PLN02760 359 -GSFAHGF--TYSGHPVSCAVALEALKIYKERN---IPEHVNKIAPRFQDGIKAFSGSPIIG--EIRGTGLILGTEFVDN 430 (504)
T ss_pred -cCcccCC--CCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhcCCCee--eEEeCceEEEEEEecC
Confidence 0011121 33456778888999999887753 6788888889999988876 333222 1223456777776321
Q ss_pred CC-----------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 IN-----------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~~-----------~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.. ...+.+.|+++ ||.+.+. +..+|+++...+|++|||+++++++++++++
T Consensus 431 ~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-----g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 431 KSPNDPFPAEWGVGAYFGAECKKR-GMLVRVA-----GDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred CcccccccchhHHHHHHHHHHHhC-CcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11 33567777766 9988642 3578999888899999999999999998765
No 288
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=3.1e-19 Score=171.18 Aligned_cols=300 Identities=18% Similarity=0.112 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHH-------cCC----
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQR-------LNF---- 108 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~-------~g~---- 108 (401)
+...++.++|.+.......+.+.|+++|++|++.++.- ......+|+....+||+.....+.-. .+.
T Consensus 76 ~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~ 155 (420)
T TIGR00700 76 EGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFA 155 (420)
T ss_pred hHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCC
Confidence 34557777787776432224599999999999998842 23444678888888888763322211 111
Q ss_pred -cEEEEeCCCCCC-------C----ChHHHHHHHhc-cCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcE
Q 015729 109 -NVDVVESDWGEG-------A----KLDVLASKLAA-DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPAL 171 (401)
Q Consensus 109 -~~~~v~~~~~~~-------~----d~~~le~~~~~-~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ 171 (401)
.+..++.....+ . +++.+++.+.. ...+++.+|++...+..+|.+++ +++|.++|++ +|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~--~gil 233 (420)
T TIGR00700 156 PEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCRE--HGIV 233 (420)
T ss_pred CCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHH--cCCE
Confidence 122333321100 0 24567776631 11257899999999888998876 7889999999 9999
Q ss_pred EEEecccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 172 FLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 172 li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
+|+|+++..... .+ +.....+|++++ +|.++++.++|++++++++.+.+..... +
T Consensus 234 lI~DEV~tg~gr~g~~~a~~~~~~~pDi~~l--sK~l~~G~pig~v~~~~~i~~~~~~~~~----------------~-- 293 (420)
T TIGR00700 234 FIADEVQTGFARTGAMFACEHEGPEPDLITT--AKSLADGLPLSGVTGRAEIMDAPAPGGL----------------G-- 293 (420)
T ss_pred EEEEecccCCcccchhHHHhhcCCCCCEEEe--eccccCCcceEEEEecHHHHhhcCCCCc----------------C--
Confidence 999999864321 11 222234777664 5999877778999999998776653211 1
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC---CC---
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH---IN--- 318 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~---~~--- 318 (401)
..++.++..++++.++++.+.+.+ ..++..+..+++++.|+++ ..+....-. ..+.++++.+.+. .+
T Consensus 294 ~T~~~~pl~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~vr--g~G~~~~i~~~~~~~~~~~~~ 368 (420)
T TIGR00700 294 GTYAGNPLACAAALAVLAIIESEG---LIERARQIGRLVTDRLTTLKAVDPRIGDVR--GLGAMIAVELVDPGTTEPDAG 368 (420)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCCEEEee--ccceEEEEEEecCCCCCccHH
Confidence 133455667788888888877654 4555556666677777654 222221111 2356777766211 11
Q ss_pred -HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 319 -SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 319 -~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
...+.+.+.++ ||.+.++... ++++||++...++++++++++++|+++++
T Consensus 369 ~~~~l~~~~~~~-Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 369 LAERIATAAHAA-GLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHC-CeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 23455555555 9999876432 57899987666899999999999998874
No 289
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=5.3e-19 Score=169.06 Aligned_cols=303 Identities=19% Similarity=0.155 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHH-------HcC----
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQ-------RLN---- 107 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~-------~~g---- 107 (401)
.+...++-+++.+.+.......+.|+++|++|++.++.. ......+|+....+||+.....+.- ..+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAM 161 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCC
Confidence 345567778888877543224699999999999998843 2344567898888888876332221 001
Q ss_pred -CcEEEEeCCCCC-CCC----hHHHHHHHhc-cCCCCceEEEEEecCCCccccc-c---hHHHHHHhhhcCCCcEEEEec
Q 015729 108 -FNVDVVESDWGE-GAK----LDVLASKLAA-DTAHTIKAICIVHNETATGVTN-N---LSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 108 -~~~~~v~~~~~~-~~d----~~~le~~~~~-~~~~~~~~i~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~~~li~D~ 176 (401)
..+..++.+... ..+ ++++++.+.+ ...+++++|++......+|... | +++|.++|++ +|+++|+|+
T Consensus 162 ~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~--~g~llI~DE 239 (425)
T PRK07495 162 MPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQ--HGILLIADE 239 (425)
T ss_pred CCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEec
Confidence 123344443211 122 4455777653 1224688999998877788654 3 7889999999 999999999
Q ss_pred ccccCcc---eeccCc--ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 177 VSSICAI---DFRMDE--WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 177 a~~~~~~---~~~~~~--~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
++..... .+..+. ..+|++++ +|.++++.++|++++++++.+.+.... ....++.
T Consensus 240 v~tG~gr~G~~~a~~~~gv~pDi~tl--sK~l~~G~pigav~~~~~i~~~~~~~~------------------~~~T~~~ 299 (425)
T PRK07495 240 VQTGFARTGKLFAMEHHEVAADLTTM--AKGLAGGFPLAAVTGRAEIMDAPGPGG------------------LGGTYGG 299 (425)
T ss_pred hhhcCCcCCCceeecccCCCCCEEee--hhhhcCCccceEEEEcHHHHhccCCCC------------------cCCCCCC
Confidence 9863211 112222 23566555 599977777899999999877664321 0113346
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCCC----C---HHHH
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHI----N---SSEI 322 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~l 322 (401)
++..+++..++++.+.+. +..++..++.+++++.|+++ .++.... ....+.++++++.+.. + ...+
T Consensus 300 ~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrG~Gl~~~iel~~~~~~~~~~~~~~~~ 374 (425)
T PRK07495 300 NPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIAD--IRGPGFMNAVEFNDADSGLPSAEFANRV 374 (425)
T ss_pred CHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeee--eecCceEEEEEEecCCCCCccHHHHHHH
Confidence 666778888999988764 36677778888888888775 2332221 1134678888873211 1 2356
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.++++ |+.+..... .++.+||.+...+|++|+|+++++++++++++
T Consensus 375 ~~~~~~~-Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 375 RLKALEK-GLILLTCGV--HGNVIRFLAPITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred HHHHHHC-CeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 6777766 988754311 25789999888999999999999999999765
No 290
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=7.3e-20 Score=156.70 Aligned_cols=321 Identities=16% Similarity=0.157 Sum_probs=223.0
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc-cCCCCCeEEEEcCCcc
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-TLSPGDRIISFLIGQF 95 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~-~~~~gd~vl~~~~~~~ 95 (401)
-+.+..+++++|.+....-.-++.+....+|+++.++++|.+. .+|+++||.++.++++. +-++|.+|++-+..|.
T Consensus 31 vT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~GKEA---gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI 107 (384)
T KOG1368|consen 31 VTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFGKEA---GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHI 107 (384)
T ss_pred ccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhCccc---eeeecccccccHHHHHHHhcCCCceEEeccchhe
Confidence 4556678888888855433334444567799999999999987 68899999999988876 5679999999888766
Q ss_pred hHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC----CCceEEEEEecCCCcc-cccchH---HHHHHhhhc
Q 015729 96 SLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA----HTIKAICIVHNETATG-VTNNLS---KVRKLLDEY 166 (401)
Q Consensus 96 ~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~----~~~~~i~~~~~~n~tG-~~~~l~---~i~~l~~~~ 166 (401)
..+ -+.+....|+.++.+...+++-+|++++|+++....+ .-+++|.+.+.++.+| .++|++ ++.++|++
T Consensus 108 ~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~- 186 (384)
T KOG1368|consen 108 HRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKR- 186 (384)
T ss_pred eehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhc-
Confidence 544 3456677788999999888999999999999974221 1478999998887776 888865 57889999
Q ss_pred CCCcEEEEecccccCc---ceeccCc--ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHh
Q 015729 167 RHPALFLVDGVSSICA---IDFRMDE--WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (401)
Q Consensus 167 ~~~~~li~D~a~~~~~---~~~~~~~--~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
+|+.++.|+|.-+-+ ......+ -.+|.+..+.+|.++.|-| ++++++++++++..-++ +.+
T Consensus 187 -~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~~R------------Kal 252 (384)
T KOG1368|consen 187 -HGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARHFR------------KAL 252 (384)
T ss_pred -cCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcc-cEEEccHHHHHHHHHHH------------HHh
Confidence 999999998743221 1112222 2468888899999987776 88999999987664321 111
Q ss_pred hcCCCCCCCCcHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcC-CCCC
Q 015729 242 NLGTFWPYTPSIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP-SHIN 318 (401)
Q Consensus 242 ~~g~~~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~ 318 (401)
--| .... ++.+|..++.- +.+. ..++-++.+..+.+.++.. ++++-.+.. .++ ++.+.+. ..++
T Consensus 253 GGG------mRQs---GvLaaaaLval~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~--etN-iv~~~l~q~~~~ 319 (384)
T KOG1368|consen 253 GGG------MRQS---GVLAAAALVALDENVP-LLRADHKRAKELAEYINTPEEIRVEVPAV--ETN-IVNMVLCQARLT 319 (384)
T ss_pred cCc------hhHH---HHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHhccccceeeecchh--hcc-eeeeecccccCC
Confidence 111 1121 22222222221 1233 6666777888888888876 365544311 233 3334443 3578
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH-HHHHHhc
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV-EMILKDV 373 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i-~~~l~~~ 373 (401)
++.+++.+.+ +||.+..+.. ..+|+.++.++|.++++.++..+ +.++...
T Consensus 320 ~~~l~~~~~k-~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 320 AEELCKFLEK-NGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred HHHHHHHHHH-CCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 9999999965 4998875533 35899999999999999999999 4455443
No 291
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.86 E-value=4.8e-19 Score=169.20 Aligned_cols=325 Identities=13% Similarity=0.076 Sum_probs=214.6
Q ss_pred CChHHHHHHHccCcCC--CC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C-----CC-CCe
Q 015729 19 HIPDQVIRAMNRNNED--YR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L-----SP-GDR 86 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~-----~~-gd~ 86 (401)
.-+|++.+++.++... +. .....+...++.+++.+...... +.+.|+++|++|++.++... . ++ ..+
T Consensus 60 h~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ 138 (429)
T PRK06173 60 YNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSL-NKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTK 138 (429)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcE
Confidence 3446666666664432 11 11223455678888888764322 35999999999999988431 1 12 357
Q ss_pred EEEEcCCcchHHHHHHHHH-------c--C---CcEEEEeCCCCC------CCChHHHHHHHhccCCCCceEEEEEec-C
Q 015729 87 IISFLIGQFSLLWIDQQQR-------L--N---FNVDVVESDWGE------GAKLDVLASKLAADTAHTIKAICIVHN-E 147 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~-------~--g---~~~~~v~~~~~~------~~d~~~le~~~~~~~~~~~~~i~~~~~-~ 147 (401)
|+....+||+..+..+... . + ..+..++.+... .-+++.+++.+.... +++.++++... +
T Consensus 139 ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~-~~iAAvi~EPi~q 217 (429)
T PRK06173 139 FATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKG-DEIAALILEPVVQ 217 (429)
T ss_pred EEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCC-CcEEEEEEcchhh
Confidence 8888888988654322110 0 0 012233322110 013566788886443 57899999985 7
Q ss_pred CCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceEEEecHH
Q 015729 148 TATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPK 217 (401)
Q Consensus 148 n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~ 217 (401)
...|...+ ++++.++|++ +|+++|+|++|..... . .+.....+|++++ .|.++|+ ..++.++.+++
T Consensus 218 g~gG~~~~~~~yl~~l~~lc~~--~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~gG~~p~~a~~~~~~ 293 (429)
T PRK06173 218 GAGGMYFYSPTYLVKARELCDQ--YGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCI--GKALTGGYLTLSATITTEA 293 (429)
T ss_pred ccCCcccCCHHHHHHHHHHHHH--cCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEe--ehhhhCCccccceEEecHH
Confidence 77788754 7889999999 9999999999853211 1 1222334788875 5999766 36789999999
Q ss_pred HHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCcc
Q 015729 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKN 296 (401)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 296 (401)
+.+.+....... +..++ +++.++..+++..++++.+.+++ ..++..++.++|++.|+++ +++.
T Consensus 294 i~~~~~~~~~~~-----------~~~~~--T~~g~p~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~ 357 (429)
T PRK06173 294 IAQTICSGEAKC-----------FMHGP--TFMANPLACAIAAESIRLLLESP---WQQNIQRIEAQLKQELAPAAEFDS 357 (429)
T ss_pred HHHHHhcCCCCc-----------cccCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCC
Confidence 877664311100 11121 22356778888999999887754 5778888899999999875 5443
Q ss_pred ccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 297 CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.. .....+.+..+.+.+..+...+.+.|+++ ||.+.+. ++.+||.+...+|++|+|+++++++++++++
T Consensus 358 v~--~vRg~Gl~~~iel~~~~~~~~i~~~l~e~-Gi~v~~~-----g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 358 VA--EVRVLGAIGVVEMKEPVNMATLQPRFVEH-GIWVRPF-----GKLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred ee--eeeccceEEEEEeCCcccHHHHHHHHHHC-CeEEEec-----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 32 12234567778885444567888989877 9988643 4689999888999999999999999999764
No 292
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=8.6e-19 Score=168.58 Aligned_cols=322 Identities=15% Similarity=0.117 Sum_probs=207.5
Q ss_pred ChHHHHHHHccCcCC--C--CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCC
Q 015729 20 IPDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIG 93 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~ 93 (401)
-+|++.+++.++... + ......+...++.++|++.+.......+.|+++|++|++.++.. ......+|+....+
T Consensus 59 ~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~ 138 (445)
T PRK08593 59 APPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNA 138 (445)
T ss_pred CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCC
Confidence 345565555554321 1 11122355667888888887543223599999999999998843 23334678888888
Q ss_pred cchHHHHHHHHHc---------C---CcEEEEeCCCCCC-----CC-------hHHHHHHHhcc-CCCCceEEEEEecCC
Q 015729 94 QFSLLWIDQQQRL---------N---FNVDVVESDWGEG-----AK-------LDVLASKLAAD-TAHTIKAICIVHNET 148 (401)
Q Consensus 94 ~~~~~~~~~~~~~---------g---~~~~~v~~~~~~~-----~d-------~~~le~~~~~~-~~~~~~~i~~~~~~n 148 (401)
||+.....+.... + ..+..++.+.... .+ .+++++.+.+. ..+++.+|++..+.+
T Consensus 139 YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g 218 (445)
T PRK08593 139 YHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQG 218 (445)
T ss_pred cCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccC
Confidence 8887632221110 0 1133344322110 11 24455555421 124689999999988
Q ss_pred Ccccccc----hHHHHHHhhhcCCCcEEEEecccc-cCcc--ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHH
Q 015729 149 ATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI--DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKAL 219 (401)
Q Consensus 149 ~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~ 219 (401)
..|.+.+ ++++.++|++ +|+++|+||++. +|.. .+ ......+|+++++ |.++++.++|++++++++.
T Consensus 219 ~gG~~~~~~~yl~~l~~lc~~--~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~g--K~l~~G~p~gav~~~~~i~ 294 (445)
T PRK08593 219 DGGLLEPVPGYFEALYKFCRE--HGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFG--KSLAGGMPMSAIVGRKEIM 294 (445)
T ss_pred CCCCcCCCHHHHHHHHHHHHH--cCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeec--ccccCCcccEEEEEcHHHH
Confidence 8898876 8899999999 999999999985 3221 11 1112346877654 9887666689999999987
Q ss_pred HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccc
Q 015729 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNC 297 (401)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 297 (401)
+.+.... ..++++.++..+++..++++.+.++ +..++..++.+++++.|+++ ..++.
T Consensus 295 ~~~~~~~------------------~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v 353 (445)
T PRK08593 295 ESLEAPA------------------HLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFV 353 (445)
T ss_pred hhhccCC------------------CCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 7664210 1123346667788888999988765 46778888888888888875 33333
Q ss_pred cCCCccCCceeEEEEcCCC----C----CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 298 TQKEEWFSDTVTAVIVPSH----I----NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~----~----~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
.. ....+.++.+.+... . ...++.+.|+++ ||.+.+. .++.+|+.+...+|++|+|+++++++++
T Consensus 354 ~~--vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~ 426 (445)
T PRK08593 354 GD--VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEH-GVVIIAV----AGNVLRFQPPLVITYEQLDTALNTIEQA 426 (445)
T ss_pred EE--EeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHC-CeEEecc----CCCEEEEECCCccCHHHHHHHHHHHHHH
Confidence 21 123445555555211 0 134677778766 9988543 2468999999999999999999999999
Q ss_pred HHhc
Q 015729 370 LKDV 373 (401)
Q Consensus 370 l~~~ 373 (401)
++++
T Consensus 427 l~~~ 430 (445)
T PRK08593 427 FTAL 430 (445)
T ss_pred HHHH
Confidence 8775
No 293
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=8e-19 Score=168.03 Aligned_cols=299 Identities=20% Similarity=0.137 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHcCC-----------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRLNF----------- 108 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~----------- 108 (401)
+...++-+++.++........+.|+++||+|++.++.. ......+|+....+||+.....+.. .+.
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~-t~~~~~~~~~~~~~ 161 (421)
T PRK06777 83 ASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMAL-TGKVAPYKVGFGPF 161 (421)
T ss_pred hHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhh-cCCCcccccCCCCC
Confidence 34457777788776533234589999999999998843 2344467888888888876332221 111
Q ss_pred --cEEEEeCCCCC-----CCChHHHHHHHhcc-CCCCceEEEEEecCCCcccc-cc---hHHHHHHhhhcCCCcEEEEec
Q 015729 109 --NVDVVESDWGE-----GAKLDVLASKLAAD-TAHTIKAICIVHNETATGVT-NN---LSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 109 --~~~~v~~~~~~-----~~d~~~le~~~~~~-~~~~~~~i~~~~~~n~tG~~-~~---l~~i~~l~~~~~~~~~li~D~ 176 (401)
.+..++.+... ..+++.+++.+++. ..+++.++++...++..|.. .| +++|.++|++ +|+++|+|+
T Consensus 162 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~--~g~llI~DE 239 (421)
T PRK06777 162 PGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDE--HGILLIADE 239 (421)
T ss_pred CCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEec
Confidence 11222222110 01356788877531 11468899999888888865 34 7889999999 999999999
Q ss_pred ccccCcc---eeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 177 VSSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 177 a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
++..... .+... ...+|+++ .+|.++++.++|+++.++++.+.+..... + ..++.
T Consensus 240 v~tg~gr~g~~~~~~~~~~~pDiv~--~sK~l~~G~pigav~~~~~i~~~~~~~~~----------------~--~T~~~ 299 (421)
T PRK06777 240 VQTGFARTGKLFAMEYYDVKPDLIT--MAKSLGGGMPISAVVGRAEVMDAPAPGGL----------------G--GTYAG 299 (421)
T ss_pred hhhCCccCCchhhhhhcCCCCCEEe--eehhhcCCCceEEEEEcHHHHhccCCCCC----------------C--CCCCc
Confidence 9873211 11112 22467765 46999766678999999998776653210 1 13345
Q ss_pred cHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC---CC----HHHH
Q 015729 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH---IN----SSEI 322 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~l 322 (401)
++..+++..++++.+.++ +..++..++.+++++.|+++ ..+.... ....+.++.+.+... .+ ...+
T Consensus 300 ~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrg~G~~~~i~~~~~~~~~~~~~~~~~l 374 (421)
T PRK06777 300 NPLAVAAALAVLDVIAEE---KLCQRALILGAHLVEVLEKAKASCPAIVD--IRARGSMVAVEFNDPQTGKPSPEFTRQY 374 (421)
T ss_pred CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEE--ecCceEEEEEEEecCccCCccHHHHHHH
Confidence 667778888888877653 57788888899999999875 2222211 112344555555221 11 2234
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.+.+.++ ||.+.++... ++++||.+....+++++++++++|++++.
T Consensus 375 ~~~~~~~-Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 375 QRQALEE-GLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHhC-CeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 4445555 9999876322 57999988777899999999999998874
No 294
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.86 E-value=2.4e-19 Score=172.67 Aligned_cols=319 Identities=15% Similarity=0.102 Sum_probs=196.1
Q ss_pred CChHHHHHHHccCcCCCCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcc
Q 015729 19 HIPDQVIRAMNRNNEDYRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQF 95 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~ 95 (401)
..+|.+++++.+....... ....+...++.++|++++... +.+++++||++|++.+++. .....++|+...++||
T Consensus 64 h~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~~--~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yh 141 (423)
T TIGR00713 64 HAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPSV--EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYH 141 (423)
T ss_pred CCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCcc--cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCC
Confidence 3345555555553322111 123455678999999987643 3599999999999998853 2345689999999988
Q ss_pred hHHHHHHHH-HcCCcEE---------------EEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----
Q 015729 96 SLLWIDQQQ-RLNFNVD---------------VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---- 155 (401)
Q Consensus 96 ~~~~~~~~~-~~g~~~~---------------~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---- 155 (401)
+........ ..+.... .+.++. -|++++++.+++.. +++++|++....+.+|.+.+
T Consensus 142 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~i~~~~-~~~aavi~ep~~~~~G~~~~~~~~ 217 (423)
T TIGR00713 142 GHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY---NDLEALEEVFEEYG-EEIAGVIVEPVAGNMGVVPPKPEF 217 (423)
T ss_pred CChhhhhccccCcccccCCCCCCCCCcccccceEEeCC---CCHHHHHHHHHHcC-CcEEEEEEeCCCCCCCCcCCCHHH
Confidence 864211110 0111000 011111 17899999987533 46788888755555898876
Q ss_pred hHHHHHHhhhcCCCcEEEEecccccCcc--ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccc
Q 015729 156 LSKVRKLLDEYRHPALFLVDGVSSICAI--DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (401)
Q Consensus 156 l~~i~~l~~~~~~~~~li~D~a~~~~~~--~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
+++|.++|++ +|+++|+|++|..... .+ ......+|++ +.+|.++++.++|++++++++.+.+..... ..
T Consensus 218 l~~l~~l~~~--~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~--~~ 291 (423)
T TIGR00713 218 LAGLRALTEE--YGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAFGGRREIMERLAPEGP--VY 291 (423)
T ss_pred HHHHHHHHHH--hCCEEEEEccccccccCcchhHHHhCCCcchh--hhhhhhcCCCceeeeeEHHHHHHhhCcCCC--ee
Confidence 6889999999 9999999999863321 11 1112235755 467999766668999999998887753210 00
Q ss_pred cchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEE
Q 015729 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTA 310 (401)
Q Consensus 232 ~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 310 (401)
. + ..++.++..++++.++++.+.+.+ .++..+....+.+.+.+.+++.++..... ..+.++.
T Consensus 292 ~-----------~--~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~----~~g~~~~ 354 (423)
T TIGR00713 292 Q-----------A--GTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVN----RVGSMFS 354 (423)
T ss_pred e-----------c--cCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE----eeccEEE
Confidence 0 1 133466677788888888877654 33444444444444454454445443211 1223444
Q ss_pred EEcCC-C---------CC---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 311 VIVPS-H---------IN---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 311 ~~~~~-~---------~~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+.. . .+ ...+.+.|+++ ||.+.++. .+.+|+++. ++++|+++++++++++++++
T Consensus 355 v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~----~~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 355 LFFTEEEVTNYADAKKSDTELFAKFFHEMLDK-GVFLPPSQ----FEACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred EEEecCCCCChhhhhcccHHHHHHHHHHHHHC-CeEEecCC----ccceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 44421 1 11 22577788875 99986442 135788654 69999999999999998753
No 295
>PRK06062 hypothetical protein; Provisional
Probab=99.86 E-value=1.1e-18 Score=167.87 Aligned_cols=321 Identities=15% Similarity=0.064 Sum_probs=206.9
Q ss_pred hHHHHHHHccCcCC--CC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcc
Q 015729 21 PDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQF 95 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~ 95 (401)
+|++.+++.++... +. .....+...++-++|.++..... +.+.|+++|++|++.++.. ......+|+....+||
T Consensus 71 ~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yH 149 (451)
T PRK06062 71 HPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDL-SKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYH 149 (451)
T ss_pred CHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCC-CEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCC
Confidence 35555555553321 11 11223445677788887764322 4599999999999998843 2344467888888888
Q ss_pred hHHHHHHHHHcC----------CcEEEEeCCCCCC--C----C-------hHHHHHHHhccCCCCceEEEEEecCCCccc
Q 015729 96 SLLWIDQQQRLN----------FNVDVVESDWGEG--A----K-------LDVLASKLAADTAHTIKAICIVHNETATGV 152 (401)
Q Consensus 96 ~~~~~~~~~~~g----------~~~~~v~~~~~~~--~----d-------~~~le~~~~~~~~~~~~~i~~~~~~n~tG~ 152 (401)
+.....+..... ..+..++.+...+ + | ++.+++.++....+++.+|++.......|.
T Consensus 150 G~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~ 229 (451)
T PRK06062 150 GGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGI 229 (451)
T ss_pred CCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCc
Confidence 876333222100 0112222221111 1 2 567888886432256889999998888899
Q ss_pred ccc----hHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHh
Q 015729 153 TNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEAS 222 (401)
Q Consensus 153 ~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~ 222 (401)
+.+ ++++.++|++ +|+++|+|+++..... . ++.....+|+++++ |.++++. ++|.++.++++.+.+
T Consensus 230 ~~p~~~yl~~lr~lc~~--~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~g--K~lggG~~Pigav~~~~~i~~~~ 305 (451)
T PRK06062 230 LVPPPGYLAGVRELCDR--HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFA--KGVNSGYVPLGGVAISEAIAATF 305 (451)
T ss_pred ccCCHHHHHHHHHHHHH--cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeec--hhhhcCCcCcEEEEEcHHHHHHh
Confidence 887 8999999999 9999999999874321 1 12223357877765 9997763 689999999987766
Q ss_pred ccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHc--CCccccC
Q 015729 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLG-KATRLAVEAW--GLKNCTQ 299 (401)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~-~~l~~~L~~~--g~~~~~~ 299 (401)
.... +..+. +++.++..+++..++|+.+.+++ ..++..+.. +++++.|+++ .++....
T Consensus 306 ~~~~--------------~~~~~--T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~ 366 (451)
T PRK06062 306 ADRP--------------YPGGL--TYSGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGE 366 (451)
T ss_pred ccCC--------------CCCCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence 4210 01121 33455777888999999887764 666666666 4777777765 2333211
Q ss_pred CCccCCceeEEEEcCCC------C--------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHH
Q 015729 300 KEEWFSDTVTAVIVPSH------I--------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAG 365 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~~~------~--------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~ 365 (401)
-...+.++.+++... . ....+.+.|+++ ||.+.+ .++.+|+++...+|++|+|+++++
T Consensus 367 --vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gvl~~~-----~~~~lrl~ppl~~t~~eid~~~~~ 438 (451)
T PRK06062 367 --VRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKER-GLLPFV-----NGNRIHVVPPCTVTEDEVREGLAI 438 (451)
T ss_pred --EeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC-CcEEee-----cCCEEEEECCccCCHHHHHHHHHH
Confidence 113455666666211 0 134677778766 988753 246899988888999999999999
Q ss_pred HHHHHHhc
Q 015729 366 VEMILKDV 373 (401)
Q Consensus 366 i~~~l~~~ 373 (401)
++++++++
T Consensus 439 l~~~l~~~ 446 (451)
T PRK06062 439 LDAALAVA 446 (451)
T ss_pred HHHHHHHh
Confidence 99999765
No 296
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.86 E-value=1.2e-18 Score=167.13 Aligned_cols=303 Identities=17% Similarity=0.165 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHhcCC--CCceEEe-cCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHH--------cCC
Q 015729 42 ALTKTLLEDIKKIFKTT--SGTPFLI-PTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQR--------LNF 108 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~--~~~~i~~-~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~--------~g~ 108 (401)
+...++.+++.+.+..+ ....+.| ++||++|++.++.. ......+|+....+||+.....+... .+.
T Consensus 82 ~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 161 (425)
T PRK09264 82 TAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGV 161 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCC
Confidence 44557777777765322 1223656 58999999998843 23444678888888888763322221 111
Q ss_pred ---cEEEEeCCCCC---CCChHHHHHHHhccC--CCCceEEEEEecCCCccccc----chHHHHHHhhhcCCCcEEEEec
Q 015729 109 ---NVDVVESDWGE---GAKLDVLASKLAADT--AHTIKAICIVHNETATGVTN----NLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 109 ---~~~~v~~~~~~---~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~~----~l~~i~~l~~~~~~~~~li~D~ 176 (401)
.+..++.+... .-|++++++.+++.. .+++.+|++....+..|... .+++|.++|++ ||+++|+|+
T Consensus 162 ~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~--~g~llI~DE 239 (425)
T PRK09264 162 PLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRK--HDILLIVDD 239 (425)
T ss_pred CCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCcEEEEec
Confidence 23445443210 026778888886421 13578999998888888765 38899999999 999999999
Q ss_pred ccccCc-----ceeccCcccceEEEecCCCcccC-CCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCC
Q 015729 177 VSSICA-----IDFRMDEWGIDVALTGSQKALSL-PTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (401)
Q Consensus 177 a~~~~~-----~~~~~~~~~~di~~~s~~K~l~g-~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 250 (401)
+|+... ..++.....+|+++++ |.+++ +.++|++++++++ ..+.... .+. .++
T Consensus 240 V~tG~GrtG~~~~~~~~~v~PDi~t~~--K~l~~~G~pigav~~~~~i-~~~~~~~----------------~~~--T~~ 298 (425)
T PRK09264 240 IQAGCGRTGTFFSFERAGITPDIVTLS--KSISGYGLPMALVLIKPEL-DVWKPGE----------------HNG--TFR 298 (425)
T ss_pred hhhCCccccHHHHHhhcCCCCCEEEec--cccCCCccceEEEEEchhh-hccCCCc----------------cCC--CCC
Confidence 986321 1122223457887775 99965 5567999998875 3322110 011 223
Q ss_pred CcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHh
Q 015729 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (401)
Q Consensus 251 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (401)
.++..+++..++++.+... .+..++.+++.+++++.|+++ ...... ......+.++++.+++......+.+.+.+
T Consensus 299 gnp~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~ 375 (425)
T PRK09264 299 GNNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGLG-AEVRGRGMMQGIDFGDGELAGKIAAEAFE 375 (425)
T ss_pred CCHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-ecceecccEEEEEecChHHHHHHHHHHHH
Confidence 4455556666777433322 357777888888888888775 233111 11123456778888543345678888887
Q ss_pred hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 329 ~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+ ||.+.+... .+..+|+++...+|++|+++++++++++++++
T Consensus 376 ~-Gv~~~~~~~--~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 376 N-GLIIETSGP--EDEVVKLLPPLTIDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred C-CCEEeccCC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7 998865422 14689998888899999999999999998765
No 297
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=2.4e-19 Score=169.99 Aligned_cols=307 Identities=14% Similarity=0.081 Sum_probs=196.6
Q ss_pred hHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEcCCcchHH
Q 015729 21 PDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLL 98 (401)
Q Consensus 21 ~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~~~~~~~~ 98 (401)
.|++++++.+......... .....++++.+++.+.......+++++||++|++.++... ..++++|++.+.++|+..
T Consensus 46 ~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~ 124 (375)
T PRK04260 46 HPQVQQALQKQAGLIWHSP-NLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRT 124 (375)
T ss_pred CHHHHHHHHHHHHhcCccc-CccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCccc
Confidence 4567766666443211110 1123456677777664443334688999999999887543 345678999888888755
Q ss_pred HHHHHHHcCC---------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhh
Q 015729 99 WIDQQQRLNF---------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (401)
Q Consensus 99 ~~~~~~~~g~---------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~ 165 (401)
+.... ..+. .+..++.. ...|++.+++.+. ++++++++..+++++|...+ ++++.++|++
T Consensus 125 ~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~ 197 (375)
T PRK04260 125 FGSMS-ATGQDKIKDGFGDGVPHFSYA--IFNDLNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQE 197 (375)
T ss_pred HHHHh-ccCCcccCCCCCCCCCCeEEe--CCCCHHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHH
Confidence 32221 1111 11111110 0137899998885 35689999999999998865 7999999999
Q ss_pred cCCCcEEEEecccccCcc---eec--cCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 166 YRHPALFLVDGVSSICAI---DFR--MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~---~~~--~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+|+++|+|++|..... .+. .....+|++ +.+|.++++..+|+++.++++.+.+.....
T Consensus 198 --~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~------------- 260 (375)
T PRK04260 198 --TGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSH------------- 260 (375)
T ss_pred --cCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCCCC-------------
Confidence 9999999999863211 111 122346766 456999755568999999988766643211
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCCCC
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
...++.++..++++.++++.+... +..++.++..+.+++.|.+. .......-. ..+.+++++++. +
T Consensus 261 -----~~t~~~~~~~~~aa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~~--~ 328 (375)
T PRK04260 261 -----GSTFGGNKLSMAAASATLDIMLTA---GFLEQALENGNYLQEQLQKALQDKETVTTVR--GLGYMIGIETTA--D 328 (375)
T ss_pred -----CCCCCcCHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe--ccceEEEEEecC--c
Confidence 112334566667777777776543 34555666666666666553 221111111 245678787732 5
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 319 ~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
..++.+.|.++ ||.+.+. ....+|+++...++++|+++++++|+++
T Consensus 329 ~~~~~~~l~~~-Gi~v~~~----~~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 329 LSQLVEAARDK-GLIVLTA----GTNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHHHHHHHhC-CCEEecC----CCCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 67899999876 9988654 2367999998889999999999999875
No 298
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.86 E-value=9.6e-19 Score=166.96 Aligned_cols=324 Identities=15% Similarity=0.080 Sum_probs=211.0
Q ss_pred CChHHHHHHHccCcCC--CC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC-----CCCCeE
Q 015729 19 HIPDQVIRAMNRNNED--YR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL-----SPGDRI 87 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~-----~~gd~v 87 (401)
.-+|++.+++.++... +. .....+...++.++|++..+.+. +.+.++++|++|++.++.- .. .+..+|
T Consensus 59 h~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~-~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~ki 137 (428)
T PRK07986 59 YNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPL-ECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRF 137 (428)
T ss_pred CCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 3346666666654332 11 11123455677788887765322 3599999999999998843 12 234689
Q ss_pred EEEcCCcchHHHHHHHHHcC------------CcEEEEeCCCCC------CCChHHHHHHHhccCCCCceEEEEEec-CC
Q 015729 88 ISFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGE------GAKLDVLASKLAADTAHTIKAICIVHN-ET 148 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~------~~d~~~le~~~~~~~~~~~~~i~~~~~-~n 148 (401)
+....+||+.....+....+ -.+..++..... .-|++++++.++... +++.+|++... +.
T Consensus 138 i~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~-~~iaavi~Epi~~g 216 (428)
T PRK07986 138 LTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHR-HEIAAVILEPIVQG 216 (428)
T ss_pred EEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCC-CcEEEEEEechhcC
Confidence 99999988865322211000 012233322110 115678888886543 46778888874 66
Q ss_pred Ccccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceEEEecHHH
Q 015729 149 ATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKA 218 (401)
Q Consensus 149 ~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~ 218 (401)
..|...+ +++|.++|++ +|+++|+||+|..... . ++.....+|++++ .|.++|+ .++|.+++++++
T Consensus 217 ~gg~~~~~~~~L~~l~~lc~~--~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~--gK~l~gG~~p~~av~~~~~i 292 (428)
T PRK07986 217 AGGMRIYHPEWLKRVRKLCDR--EGILLIADEIATGFGRTGKLFACEHAGIAPDILCL--GKALTGGTMTLSATLTTREV 292 (428)
T ss_pred cCCcccCCHHHHHHHHHHHHH--cCCEEEEeccccCCccCCCeeeecccCCCCCEEEe--chhhhCCcccCcchhchHHH
Confidence 6676542 7899999999 9999999999853211 1 1222334788875 5999776 478888999998
Q ss_pred HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccc
Q 015729 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNC 297 (401)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 297 (401)
.+.+....... +..++ +++.++..+++..++++.+.+++ ..++..++.+++++.|+++ ..+..
T Consensus 293 ~~~~~~~~~~~-----------~~~~~--T~~g~p~~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i 356 (428)
T PRK07986 293 AETISNGEAGC-----------FMHGP--TFMGNPLACAVANASLSLLESGD---WQQQVAAIEAQLREELAPLRDAPMV 356 (428)
T ss_pred HHHhhcCCCCc-----------cccCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 87775321000 00122 33456778888999999887764 5788888889999999886 43332
Q ss_pred cCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 298 TQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
. +....+.+..+++.+..+...+.+.|.++ ||.+.+. ++.+|+.+...+|++|++++++++++++++
T Consensus 357 ~--~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~-Gl~~~~~-----g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 357 A--DVRVLGAIGVVETTRPVNMAALQRFFVEQ-GVWIRPF-----GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred E--eEeccceEEEEEeCCcccHHHHHHHHHHC-CcEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 2 12234567777774434466888888876 9988643 468999888889999999999999999864
No 299
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.86 E-value=1.2e-18 Score=167.62 Aligned_cols=304 Identities=18% Similarity=0.114 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--------CCCCCeEEEEcCCcchHHHHHHHHHc------
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--------LSPGDRIISFLIGQFSLLWIDQQQRL------ 106 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--------~~~gd~vl~~~~~~~~~~~~~~~~~~------ 106 (401)
.+...++.++|.+..+... ..+.|+++|++|++.++... .....+|+....+||+.....+....
T Consensus 96 ~~~~~~lAe~L~~~~p~~~-~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~ 174 (453)
T PRK06943 96 HEPAIELAERLAALTGGTL-GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKD 174 (453)
T ss_pred CHHHHHHHHHHHHhCCCCC-CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhc
Confidence 3455678888888765432 35999999999999988432 11236799999999887532221110
Q ss_pred --C---CcEEEEeCCCCCC------------CChHHHHHHHhccCCCCceEEEEEe-cCCCcccccc----hHHHHHHhh
Q 015729 107 --N---FNVDVVESDWGEG------------AKLDVLASKLAADTAHTIKAICIVH-NETATGVTNN----LSKVRKLLD 164 (401)
Q Consensus 107 --g---~~~~~v~~~~~~~------------~d~~~le~~~~~~~~~~~~~i~~~~-~~n~tG~~~~----l~~i~~l~~ 164 (401)
+ ..+..++.+.... -+++++++.++... +++.+|++.. ++...|...+ ++++.++|+
T Consensus 175 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~ 253 (453)
T PRK06943 175 AYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERA-GKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCD 253 (453)
T ss_pred ccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCC-CceEEEEEeccccccCCcccCCHHHHHHHHHHHH
Confidence 0 0123333322110 02467788886544 5789999998 4777888764 788999999
Q ss_pred hcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 165 EYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+ +|+++|.||++..... .+ +.....+|+++++ |.++++ .++|.+++++++.+.+........
T Consensus 254 ~--~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~-------- 321 (453)
T PRK06943 254 R--YGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLS--KGISGGYLPLSLVLSRDAIFAAFYDDDVTRG-------- 321 (453)
T ss_pred H--cCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeee--hhhccCcccceEEEEcHHHHHhhcccCccCC--------
Confidence 9 9999999999763311 11 2223348999886 999877 478999999998876653110000
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHI 317 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (401)
+..++ +++.++..+++..++++.+.+++ ..++..+..+++.+.|+++ ....+. .....+.++.+++....
T Consensus 322 --~~~~~--T~~gnpl~~aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~--~vrG~Gl~~gvel~~~~ 392 (453)
T PRK06943 322 --FLHSH--SYTGNPLACRAALATLDLFAEDD---VLARNARKSARLRAALAPLAAHPQVR--HLRQRGTIFAFDVALDG 392 (453)
T ss_pred --ccCCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEE--eEeccccEEEEEEccCC
Confidence 01121 33456777888999999988754 6677788888888888876 322222 22245667777773211
Q ss_pred C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 318 N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 318 ~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+ ...+.+.+.++ ||.+.+. ++.+||++...+|++|+|+++++++++++++
T Consensus 393 ~~~~~~~~~i~~~~~~~-Gll~~~~-----g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 393 DAARTFSRRFFEAALER-ELLLRPI-----GTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CcchHHHHHHHHHHHHC-CcEEEec-----CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1 34577777766 9887642 3579999888899999999999999999764
No 300
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.85 E-value=5.6e-19 Score=167.56 Aligned_cols=311 Identities=14% Similarity=0.102 Sum_probs=198.3
Q ss_pred hHHHHHHHccCcCCC---CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC------CCC-CeEEEE
Q 015729 21 PDQVIRAMNRNNEDY---RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------SPG-DRIISF 90 (401)
Q Consensus 21 ~~~v~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~------~~g-d~vl~~ 90 (401)
+|++.+++.+..... ......+...++.+.+.+..+ .+.+++++||++|++.++.... +++ ++|+..
T Consensus 54 ~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~ 130 (395)
T PRK03715 54 NPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSC---FDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITF 130 (395)
T ss_pred CHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccC---CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEE
Confidence 466666666543221 111122333444444444322 2359999999999999885432 123 578888
Q ss_pred cCCcchHHHHHHHHHcCCcE---EEEeCCCCC----CCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHH
Q 015729 91 LIGQFSLLWIDQQQRLNFNV---DVVESDWGE----GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKV 159 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~---~~v~~~~~~----~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i 159 (401)
+.+||+.....+. ..+... ...+...+. ..|++++++.+. +++++|++..+++..|.+.+ +++|
T Consensus 131 ~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l 205 (395)
T PRK03715 131 DHSFHGRTLATMS-ASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQL 205 (395)
T ss_pred CCCcCCChHHHHh-hcCCcccccCCCCCCCCceeeCCchHHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHH
Confidence 8888887643322 222211 011111110 137889998886 35789999999999998876 8999
Q ss_pred HHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccch
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
.++|++ +|+++|+|++|+.... ..+.....+|+++++ |.++++.++|.+++++++.. +... .
T Consensus 206 ~~l~~~--~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~~i~~-~~~~-----~--- 272 (395)
T PRK03715 206 RALTKQ--HGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKAEVAV-FEAG-----D--- 272 (395)
T ss_pred HHHHHH--cCCEEEEeccccCCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEcccccc-ccCC-----C---
Confidence 999999 9999999999873211 112222347887765 99987666888888888642 1110 0
Q ss_pred HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEE
Q 015729 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVI 312 (401)
Q Consensus 235 ~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~ 312 (401)
.++ +++.++..+++..++++.+.++ +..++.+++.+++++.|+++ ...+ . .....+.++.+.
T Consensus 273 --------~~~--T~~g~pl~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i-~--~vrG~Glm~~i~ 336 (395)
T PRK03715 273 --------QGG--TYNGNPLMTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGL-E--GERGEGLLRALL 336 (395)
T ss_pred --------cCC--CCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCc-C--eEEcceeEEEEE
Confidence 011 2245567788889999988754 47788888999999998875 2221 1 112345677788
Q ss_pred cCCCCCHHHHHHHHHh--hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 313 VPSHINSSEIVRRAWQ--RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 313 ~~~~~~~~~l~~~L~~--~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.+. ....+.+.+.+ +.||.+... .+..+||.+...+|++|+|+++++|+++++++
T Consensus 337 l~~~-~~~~~~~~~~~~~~~Gi~~~~~----~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 337 LGKD-IGPQIVEKARDMQPDGLLLNAP----RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred ecCc-hHHHHHHHHHhccCCCEEEeec----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 7432 23344444432 128887533 24689999999999999999999999998764
No 301
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.85 E-value=1.7e-18 Score=166.35 Aligned_cols=305 Identities=19% Similarity=0.177 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC----C--CCCeEEEEcCCcchHHHHHHHHH--------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL----S--PGDRIISFLIGQFSLLWIDQQQR-------- 105 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~----~--~gd~vl~~~~~~~~~~~~~~~~~-------- 105 (401)
+...++.++|.+.+.... +.+.|+++|++|++.++.. .. . ...+|+....+||+.....+...
T Consensus 92 ~~~~~la~~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~ 170 (445)
T PRK09221 92 PLAFELAERLAELAPGGL-DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKM 170 (445)
T ss_pred HHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhc
Confidence 445578888888764322 3599999999999998843 11 1 13578999999988753222110
Q ss_pred cC---CcEEEEeCCC-CC--CC----------ChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhh
Q 015729 106 LN---FNVDVVESDW-GE--GA----------KLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (401)
Q Consensus 106 ~g---~~~~~v~~~~-~~--~~----------d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~ 165 (401)
.+ ..+..++.+. .. .+ ..+++++.++....+++.+|++....+..|.+.+ ++++.++|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~ 250 (445)
T PRK09221 171 FGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDK 250 (445)
T ss_pred cCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHH
Confidence 01 1123333321 00 00 1357777776432246889999999999999988 8999999999
Q ss_pred cCCCcEEEEecccc-cCc--cee--ccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 166 YRHPALFLVDGVSS-ICA--IDF--RMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 166 ~~~~~~li~D~a~~-~~~--~~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
+|+++|+|++++ +|- ..+ +.....+|+++++ |.++++ .++|.+++++++.+.+...... . .
T Consensus 251 --~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~--~-------~ 317 (445)
T PRK09221 251 --HGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFA--KGLTNGAIPMGAVIASDEIYDAFMQGPEY--A-------I 317 (445)
T ss_pred --cCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEec--cccccCcccceeeEEcHHHHHhhccCccc--c-------c
Confidence 999999999985 331 112 2222346888776 888654 4578899999987766431000 0 0
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCC--C
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS--H 316 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--~ 316 (401)
.+..+ .+++.++..+++..++++.+.+++ ..++..++.+++++.|+++ +...+.. ....+.+..+.+.. .
T Consensus 318 ~~~~~--~T~~~~pl~~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~--vrg~Gl~~~v~~~~~~~ 390 (445)
T PRK09221 318 EFFHG--YTYSAHPVACAAGLATLDIYREED---LFERAAELAPYFEDAVHSLKGLPHVID--IRNIGLVAGIELAPRPG 390 (445)
T ss_pred ccccc--cCCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhccCCCEEE--EecCceEEEEEEecccc
Confidence 01112 133456667778888999887754 6788899999999999886 4433221 11234455555521 1
Q ss_pred ---CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 ---INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ---~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
....++.+.|+++ ||.+.++ ++.+||++...+|++|+|+++++++++++++
T Consensus 391 ~~~~~~~~~~~~~~~~-Gv~~~~~-----~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 391 APGARGYEAFMKCFEK-GLLVRYT-----GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred cccchHHHHHHHHHHC-CeEEeec-----CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 1235678888776 9988642 4689999888999999999999999999764
No 302
>PRK06105 aminotransferase; Provisional
Probab=99.85 E-value=8e-19 Score=169.37 Aligned_cols=306 Identities=14% Similarity=0.054 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--------CCCCeEEEEcCCcchHHHHHHHH--------
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQ-------- 104 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~-------- 104 (401)
.+...++.++|.+++..+. ..+.|+++|++|++.++.... ....+|+....+||+.......-
T Consensus 91 ~~~~~~lae~L~~~~p~~~-~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~ 169 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPM-SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHR 169 (460)
T ss_pred CHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCccccc
Confidence 3455678888888875432 358999999999999885421 12357888888888876322110
Q ss_pred HcC---CcEEEEeCCCCCCC-------------ChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhh
Q 015729 105 RLN---FNVDVVESDWGEGA-------------KLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLD 164 (401)
Q Consensus 105 ~~g---~~~~~v~~~~~~~~-------------d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~ 164 (401)
..+ ..+..++.+..... ..+++|+.+.....+++.+|++...+...|...+ ++++.++|+
T Consensus 170 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~ 249 (460)
T PRK06105 170 SFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLR 249 (460)
T ss_pred ccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 011 01222332211111 1356777775322246899999988888898876 889999999
Q ss_pred hcCCCcEEEEecccc-cCcc--e--eccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 165 EYRHPALFLVDGVSS-ICAI--D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 165 ~~~~~~~li~D~a~~-~~~~--~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+ +|+++|+||++. +|-. . ++.....+|+++++ |.++++ .++|.++.++++.+.+........
T Consensus 250 ~--~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~g--K~lggG~~P~~av~~~~~i~~~~~~~~~~~~-------- 317 (460)
T PRK06105 250 K--YDILLVADEVICGFGRTGNMFGCETFGIKPDILVMS--KQLSSSYQPLSAVLMNEKVYDPIADESGKIG-------- 317 (460)
T ss_pred H--cCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeee--cccccCcccceEEEEcHHHHHHHhcccccCc--------
Confidence 9 999999999984 4321 1 12223347888776 999766 368999999998776653211000
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC-
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
.+ .+..+++.++..+++..++++.+.++ +..++..++.+++++.|+++ ...... .....+.+..+++...
T Consensus 318 -~~--~h~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~--~vrG~Gl~~gie~~~~~ 389 (460)
T PRK06105 318 -TF--GHGFTASGHPVAAAVALENLAIIEER---DLVGNAAERGARLQARLRALADHPLVG--EVRGVGLIAAVELVADK 389 (460)
T ss_pred -cc--ccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeE--EEEecceEEEEEEecCc
Confidence 00 01124456677778888899988875 46778888888898888886 333222 1223456666776211
Q ss_pred C-----C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 I-----N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~-----~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. + +..+...++++ ||.+.+. ++.+|+++...+|++|+|+++++++++++++
T Consensus 390 ~~~~~~~~~~~~a~~i~~~~~~~-Gvl~~~~-----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 390 ATKTPFEPPGKVGARANAAAHEH-GVISRAM-----GDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred ccCCCCCchhHHHHHHHHHHHHC-CeEEEec-----CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 0 0 24577777765 9988642 4689998888899999999999999999765
No 303
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.85 E-value=4.3e-20 Score=171.74 Aligned_cols=272 Identities=15% Similarity=0.180 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG- 118 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 118 (401)
+...+.+.++..|+.||++.. .++++|+|.+|.+++.+++++||+|++.-++|-|.. ..+...|+++++++...+
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t--~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~--~alil~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKT--FFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY--NALILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEE--EEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH--HHHHHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCCCeE--EEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH--HHHHHcCCeEEEecCCccc
Confidence 345688999999999999874 678899999999999999999999999999998886 356678999998886421
Q ss_pred ----CCCCh-----HHHHHHHhccCCCC-ceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCc----ce
Q 015729 119 ----EGAKL-----DVLASKLAADTAHT-IKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA----ID 184 (401)
Q Consensus 119 ----~~~d~-----~~le~~~~~~~~~~-~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~----~~ 184 (401)
+.+++ +.+++++++++..+ ++++++++| |..|.+.|+++|.++|++ ++++|++|+||+.-. ++
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~--~~~~llvDEAhGah~~F~~lp 216 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICHK--HGIPLLVDEAHGAHFGFHPLP 216 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCC--TECEEEEE-TT-TTGGCSGGG
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEECHHHHHHHhcc--cCCEEEEEccccccccCCCCc
Confidence 23566 99999999876222 445888876 568999999999999999 999999999987432 22
Q ss_pred eccCcccce-------EEEecCCCcccCCCcceEEEecHHH-H--HHhccCCCCccccchHHHHHHhhcCCCCCCCCcHH
Q 015729 185 FRMDEWGID-------VALTGSQKALSLPTGMGIVCASPKA-L--EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (401)
Q Consensus 185 ~~~~~~~~d-------i~~~s~~K~l~g~~g~G~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 254 (401)
.+....|+| +++.|.||++.+....+++.++.+. + +++. .....+. +.+|+..
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~------------~~l~~~~-----TTSPSY~ 279 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVN------------EALSMHQ-----TTSPSYP 279 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHH------------HHHHHHS------SS--HH
T ss_pred cchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHH------------HHHHHHc-----CCChHHH
Confidence 233456788 9999999999988888999988763 1 2221 1111222 3368889
Q ss_pred HHHHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHH---c-CCccccCCCc-------------------------cC
Q 015729 255 LLYGLRAALDLI-FEEGLENVIERHRRLGKATRLAVEA---W-GLKNCTQKEE-------------------------WF 304 (401)
Q Consensus 255 ~~~a~~~al~~~-~~~g~~~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~-------------------------~~ 304 (401)
.++++..+.+.+ ...| ++..++..++++.+++.+++ . +++++.++.- ..
T Consensus 280 lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~l 358 (417)
T PF01276_consen 280 LMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYML 358 (417)
T ss_dssp HHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE
T ss_pred HHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCcccc
Confidence 999999999988 5555 67888888999999999854 2 5555543210 01
Q ss_pred CceeEEEEcC----------CCCCHHHHHHHHHhhCCeEEccC
Q 015729 305 SDTVTAVIVP----------SHINSSEIVRRAWQRYNLSLGLG 337 (401)
Q Consensus 305 ~~~~~~~~~~----------~~~~~~~l~~~L~~~~~i~v~~g 337 (401)
.++-+.+.+| .|+++..+.++|.++ ||.+...
T Consensus 359 DP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~-~I~~Ek~ 400 (417)
T PF01276_consen 359 DPTKLTINTPGIDADGELSELGIPGYIVEKYLREH-GIQVEKT 400 (417)
T ss_dssp -TTEEEEE-STBETTSSB-SS---HHHHHHHHHHT-TEE-SEE
T ss_pred CCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHc-CCEEEec
Confidence 2334445542 357888999999877 9987644
No 304
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.85 E-value=2.4e-18 Score=160.60 Aligned_cols=303 Identities=15% Similarity=0.142 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC----
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD---- 116 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 116 (401)
...+.++++.+++++|.+. ++++++||.|++++....++|||.| +.+.|+.... ...+..|+..+.++.+
T Consensus 70 ~~s~~~lE~~va~~~G~~~---av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~-ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 70 SRNFYHLERTVRELYGFKY---VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTR-YHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCcHHHHHHHHHHHHCCCe---EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHH-HHHHhCCeEEEeeecccccc
Confidence 4457799999999999987 8999999999888766678999977 5565655442 2246678766666433
Q ss_pred ------CCCCCChHHHHHHHhccCCCCceEEEEEecCCCc-cccc---chHHHHHHhhhcCCCcEEEEecccccCccee-
Q 015729 117 ------WGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTN---NLSKVRKLLDEYRHPALFLVDGVSSICAIDF- 185 (401)
Q Consensus 117 ------~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-G~~~---~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~- 185 (401)
.++.+|++.+++++++....+++.+.++.++|.. |... ++++|.++|++ +|++||.|+|+.++...+
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~--~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEA--HGIKVFYDATRCVENAYFI 221 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHH--cCCEEEEEccchhhChhhh
Confidence 3478899999999986432355677777777765 7885 47899999999 999999999998754221
Q ss_pred ----------ccC------cccceEEEecCCCcccCCCcceEEE-ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCC
Q 015729 186 ----------RMD------EWGIDVALTGSQKALSLPTGMGIVC-ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (401)
Q Consensus 186 ----------~~~------~~~~di~~~s~~K~l~g~~g~G~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 248 (401)
++. --.+|..++|++|..+++.| |+++ .++++.++++..... + -|.-..
T Consensus 222 ~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~------------~-eG~~ty 287 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVV------------F-EGMPSY 287 (450)
T ss_pred hcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhh------------c-CCcccc
Confidence 110 11579999999999977777 7777 566776666543211 1 111001
Q ss_pred CCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc----C----CCCCHH
Q 015729 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV----P----SHINSS 320 (401)
Q Consensus 249 ~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~----~----~~~~~~ 320 (401)
+......+.++..+++...+ .....+..+..++|.+.|.+.|+++..+. .+..+.+.. | +..++.
T Consensus 288 Ggla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~p~----ggh~V~vda~~~lph~~~~~~p~~ 360 (450)
T TIGR02618 288 GGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVEPV----GGHAVFLDARRFLPHIPQDQFPAQ 360 (450)
T ss_pred CchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccCCC----CcceEEEEhHHhCCCCChhhChHH
Confidence 11112122233333332221 13444555678999999999999886542 223444543 2 235678
Q ss_pred HHHHHHHhhCCeEEc------cCCCCCCC-------cEEEEeecc-cCCHHHHHHHHHHHHHHHHh
Q 015729 321 EIVRRAWQRYNLSLG------LGLNKVAG-------KVFRIGHLG-HLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 321 ~l~~~L~~~~~i~v~------~g~~~~~~-------~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~ 372 (401)
.++..|....||.-. .|.++..+ ..+|+.+.- ..|.+.+|...+++.++.+.
T Consensus 361 al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 361 SLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred HHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 888888876677622 22222111 348986544 66889999999999988754
No 305
>PRK05965 hypothetical protein; Provisional
Probab=99.85 E-value=3e-18 Score=165.38 Aligned_cols=335 Identities=16% Similarity=0.110 Sum_probs=216.7
Q ss_pred hHHHHHHHccCcCC--CCC---ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC----C-C-CCeE
Q 015729 21 PDQVIRAMNRNNED--YRS---PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL----S-P-GDRI 87 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~---~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~----~-~-gd~v 87 (401)
+|++.+++.++... +.. ....+...++-++|.+....+. +.+.|+++|++|++.++.. .. . + ..+|
T Consensus 64 ~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~ki 142 (459)
T PRK05965 64 QESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL-NHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQF 142 (459)
T ss_pred CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc-CEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEE
Confidence 56666666664432 111 1123445578888888764322 3599999999999998843 11 1 2 3578
Q ss_pred EEEcCCcchHHHHHHHH--------HcCC---cEEEEeCCCCCC----CC--------hHHHHHHHhccCCCCceEEEEE
Q 015729 88 ISFLIGQFSLLWIDQQQ--------RLNF---NVDVVESDWGEG----AK--------LDVLASKLAADTAHTIKAICIV 144 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~--------~~g~---~~~~v~~~~~~~----~d--------~~~le~~~~~~~~~~~~~i~~~ 144 (401)
+....+||+.....+.- ..+. .+..++.+...+ -| ++++++.+++...+++.+|++.
T Consensus 143 i~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvE 222 (459)
T PRK05965 143 ISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCE 222 (459)
T ss_pred EEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 99998888875322111 1111 123333221110 12 2577888865432578999999
Q ss_pred ecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---eeccC--cccceEEEecCCCcccCCC-cceEEEe
Q 015729 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPT-GMGIVCA 214 (401)
Q Consensus 145 ~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~--~~~~di~~~s~~K~l~g~~-g~G~l~~ 214 (401)
..+...|.+.+ ++++.++|++ +|+++|.||++..... .+..+ ...+|+++++ |.++++. ++|.+++
T Consensus 223 Piqg~gG~~~p~~~yl~~lr~lc~~--~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~ 298 (459)
T PRK05965 223 PIQGSGGVIVPPKGWLKAMREACRE--LGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVA--KGLTSGYVPMGAVLM 298 (459)
T ss_pred ccccCCCCccCCHHHHHHHHHHHHH--cCCEEEEechhccCccCchhhhHhhcCCCCCeEEec--hhhccCCcceeEEEE
Confidence 98888888764 7889999999 9999999999864321 12222 2347888887 9998774 7999999
Q ss_pred cHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-C
Q 015729 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G 293 (401)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g 293 (401)
++++.+.+........ .+.-++ +++.++..+++..++++.+++++ ..++..+..+++.+.|+++ .
T Consensus 299 ~~~i~~~~~~~~~~~~---------~~~h~~--T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~ 364 (459)
T PRK05965 299 SDHVYQGIADGAGAAA---------PVGHGY--TYSAHPVSAAVGLEVLRLYHEGG---LLANGQKAGPRFAAGLDALRA 364 (459)
T ss_pred cHHHHHHHhccccccc---------cccccC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhcc
Confidence 9999877643210000 001122 34566677888899999988764 6777888888999999886 3
Q ss_pred CccccCCCccCCceeEEEEcCCCC------C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHH
Q 015729 294 LKNCTQKEEWFSDTVTAVIVPSHI------N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGC 362 (401)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~ 362 (401)
..... +....+.++.+++.+.. + ...+.+.++++ ||.+.+. ..+.+|+.+...+|++|++++
T Consensus 365 ~~~v~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gll~~~~----g~~~i~~~PpL~it~~ei~~~ 437 (459)
T PRK05965 365 HPLVG--DVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYAN-GLVFRAF----GDGVLGFAPALCCTEGEFDLI 437 (459)
T ss_pred CCCEE--EEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhC-CeEEEec----CCcEEEEECCCcCCHHHHHHH
Confidence 32222 22245666777763211 1 23566777766 9988632 246799988888999999999
Q ss_pred HHHHHHHHHhcCCCCCcch
Q 015729 363 LAGVEMILKDVGYPVKLGS 381 (401)
Q Consensus 363 ~~~i~~~l~~~~~~~~~~~ 381 (401)
+++++++++++...+++..
T Consensus 438 ~~~l~~~l~~~~~~~~~~~ 456 (459)
T PRK05965 438 FERTRKTLDDVLADPDVRA 456 (459)
T ss_pred HHHHHHHHHHHhcCcchhh
Confidence 9999999998755555443
No 306
>PRK06541 hypothetical protein; Provisional
Probab=99.85 E-value=1.7e-18 Score=166.94 Aligned_cols=304 Identities=14% Similarity=0.090 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC---C---CCCeEEEEcCCcchHHHHHHHHHcC------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL---S---PGDRIISFLIGQFSLLWIDQQQRLN------ 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~---~---~gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (401)
+...++.++|.++...+. +.+.|+++|++|++.++.- .. . ...+|+....+||+.....+.. .+
T Consensus 95 ~~~~~la~~l~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~-~~~~~~~~ 172 (460)
T PRK06541 95 PPAIELAERLAALAPGDL-NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAI-TGLPAFKA 172 (460)
T ss_pred HHHHHHHHHHHHhCCCCc-CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcC-cCChhhcc
Confidence 445677788887764322 4599999999999998842 11 1 2468899988888876322211 11
Q ss_pred ------CcEEEEeCCCCCC-----CC--------hHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhh
Q 015729 108 ------FNVDVVESDWGEG-----AK--------LDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLD 164 (401)
Q Consensus 108 ------~~~~~v~~~~~~~-----~d--------~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~ 164 (401)
..+..++.+.... -+ ++.+++.++....+++.+|++...+++.|.+.+ +++|.++|+
T Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~ 252 (460)
T PRK06541 173 PFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICD 252 (460)
T ss_pred ccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 1123333221100 11 366787776422246788888888999999987 899999999
Q ss_pred hcCCCcEEEEeccc-ccCcc--eeccC--cccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 165 EYRHPALFLVDGVS-SICAI--DFRMD--EWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 165 ~~~~~~~li~D~a~-~~~~~--~~~~~--~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+ +|+++|+|+++ ++|-. .+..+ ...+|++++ +|.++++. ++|.+++++++.+.+.... ....
T Consensus 253 ~--~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~--gK~l~~G~~pigav~~~~~i~~~~~~~~-~~~~------- 320 (460)
T PRK06541 253 R--YDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITC--AKGITSGYSPLGAMIASDRLFEPFLDGP-TMFL------- 320 (460)
T ss_pred H--cCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEe--cccccCCccceeEEEEcHHHHHHhhcCC-Cccc-------
Confidence 9 99999999998 44421 11121 234788875 49997654 6899999999877665321 1100
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC-
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
.+ .+++.++..+++..++++.+.+++ ..++..++.++|.+.|+++ .+.+... ....+.++.+++.+.
T Consensus 321 ----~~--~T~~gnp~~~aaala~l~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~v~~--vrg~Gl~~~ie~~~~~ 389 (460)
T PRK06541 321 ----HG--YTFGGHPVSAAVALANLDIFEREG---LLDHVRDNEPAFRATLEKLLDLPIVGD--VRGDGYFYGIELVKDK 389 (460)
T ss_pred ----cC--CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEE--EEecceEEEEEEecCc
Confidence 01 133455667788888888877653 6688889999999999886 4333211 113455666776221
Q ss_pred -----CCH--------HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 -----INS--------SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 -----~~~--------~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+. ..+...|+++ ||.+.+.. .....+||++...+|++|+|+++++++++++++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~--~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 390 ATKETFTDDESERLLRGFLSPALFEA-GLYCRADD--RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred ccccCCcchhhhhhHHHHHHHHHHhC-CeEEEecC--CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 000 2456677766 99987531 123679999998999999999999999998753
No 307
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.85 E-value=3.9e-20 Score=155.23 Aligned_cols=164 Identities=29% Similarity=0.300 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCCh
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL 123 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~ 123 (401)
+.++++.++++++.+. +.+++++|+|+|+..++.++.+++++|+++.++|++..+ ..++..|++++.++.+.++..+.
T Consensus 2 ~~~~~~~l~~~~~~~~-~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~ 79 (170)
T cd01494 2 LEELEEKLARLLQPGN-DKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW-VAAELAGAKPVPVPVDDAGYGGL 79 (170)
T ss_pred HHHHHHHHHHHcCCCC-CcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh-hHHHhcCCEEEEeccCCCCccch
Confidence 4589999999996433 348888999999999999988889999999999888875 56788899999998876543333
Q ss_pred --HHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee---ccCcccceEEEec
Q 015729 124 --DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---RMDEWGIDVALTG 198 (401)
Q Consensus 124 --~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~---~~~~~~~di~~~s 198 (401)
+.+++.... .+++++++++++|++|...|+++|.++|++ +|+++|+|+++..+.... +....++|+++.|
T Consensus 80 ~~~~~~~~~~~---~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s 154 (170)
T cd01494 80 DVAILEELKAK---PNVALIVITPNTTSGGVLVPLKEIRKIAKE--YGILLLVDAASAGGASPAPGVLIPEGGADVVTFS 154 (170)
T ss_pred hhhhhhhcccc---CceEEEEEecCcCCCCeEcCHHHHHHHHHH--cCCEEEEecccccccccccccccccccCCEEEEE
Confidence 244443322 578999999999999999999999999999 999999999999877654 4556689999999
Q ss_pred CCCcccCCCcceEEEec
Q 015729 199 SQKALSLPTGMGIVCAS 215 (401)
Q Consensus 199 ~~K~l~g~~g~G~l~~~ 215 (401)
.||++++ +|+|+++++
T Consensus 155 ~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 155 LHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccCC-CceEEEEeC
Confidence 9999976 888999875
No 308
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.85 E-value=1.3e-18 Score=165.56 Aligned_cols=314 Identities=19% Similarity=0.172 Sum_probs=199.8
Q ss_pred CChHHHHHHHccCcCC--CCC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC----C--C-CCe
Q 015729 19 HIPDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL----S--P-GDR 86 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~----~--~-gd~ 86 (401)
.-+|.+.+++.++... +.. ....+...++.++|.+..+. .+.+.|+++|++|++.++.. .. . + .++
T Consensus 56 h~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ 133 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF--AEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRV 133 (408)
T ss_pred CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC--CCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcE
Confidence 3345555555553321 111 11233445777777776532 24699999999999998843 11 1 1 246
Q ss_pred EEEEcCCcchHHHHHHHHHcCC------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 87 IISFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
|+....+||+.....+.. .+- .+..++ . .|++.+++.++. +++.++++...+...|.+.
T Consensus 134 ii~~~~~yHG~t~~~~s~-~~~~~~~~~~~~~~~~~~~~~--~---~d~~~l~~~~~~---~~~aavi~eP~~~~gg~~~ 204 (408)
T PRK04612 134 IVTFRGSFHGRTLAAVTA-TAQPKYQEGYEPLPGGFRYVD--F---NDVEALEAAMAG---GDVAAVMLEPIQGEGGVMP 204 (408)
T ss_pred EEEECCCcCCccHHHHHh-cCCcccccCCCCCCCCceEcC--C---CCHHHHHHhhCC---CCEEEEEECCccCCCCCcC
Confidence 889888888876432221 111 011111 1 278899988853 3566666665554444444
Q ss_pred c----hHHHHHHhhhcCCCcEEEEecccccCcc---eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 155 N----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 155 ~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
+ +++|.++|++ +|+++|+|+++..... .+.....+++..+.+.+|.++++.++|+++.++++.+.+.....
T Consensus 205 ~~~~~l~~l~~l~~~--~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~ 282 (408)
T PRK04612 205 AAPGFLARVRALCDQ--HDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAH 282 (408)
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCc
Confidence 2 7889999999 9999999999863211 11111223333344445999766678999998887666543210
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCC
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFS 305 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~ 305 (401)
+ ..++.++..+++..++++.+.++ +..++..++.+++++.|+++ .+.+... ....
T Consensus 283 ----------------~--~t~~~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~~--vrg~ 339 (408)
T PRK04612 283 ----------------G--TTFGGNPLAAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFAQ--VRGR 339 (408)
T ss_pred ----------------C--CCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeee--eecc
Confidence 1 12345677778888888888764 47788888899999999886 3333321 1234
Q ss_pred ceeEEEEcCCC--CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 306 DTVTAVIVPSH--INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 306 ~~~~~~~~~~~--~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+.++.+.+... ..+.++.+.|.++ ||.+.+. ..+.+|+.+...++++|+|+++++++++++++
T Consensus 340 Gl~~~i~~~~~~~~~a~~i~~~l~~~-Gvlv~~~----g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 340 GLMLGAVLAPAHAGQAGAILDLAAEH-GLLLLQA----GPDVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred ceEEEEEecCchhhHHHHHHHHHHHC-CeEEeeC----CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 56777776321 1245778888766 9988642 23789999888999999999999999999764
No 309
>PRK07482 hypothetical protein; Provisional
Probab=99.85 E-value=1.9e-18 Score=166.78 Aligned_cols=308 Identities=15% Similarity=0.081 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C----C--CCCeEEEEcCCcchHHHHHHH--------H
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L----S--PGDRIISFLIGQFSLLWIDQQ--------Q 104 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~----~--~gd~vl~~~~~~~~~~~~~~~--------~ 104 (401)
.+...++-++|.+....+. +.+.|+++|++|++.++... . . ...+|+....+||+....... .
T Consensus 93 ~~~~~~lAe~L~~~~p~~~-~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~ 171 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGM-SKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQ 171 (461)
T ss_pred CHHHHHHHHHHHHhCCCCc-CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhh
Confidence 3556678888888764322 35899999999999988432 1 1 235788888888886532111 0
Q ss_pred HcC---CcEEEEeCCCCCC-------------CChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhh
Q 015729 105 RLN---FNVDVVESDWGEG-------------AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLD 164 (401)
Q Consensus 105 ~~g---~~~~~v~~~~~~~-------------~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~ 164 (401)
..+ -.+..++.+...+ .+++++++.+.....+++.+|++.......|.+.+ +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~ 251 (461)
T PRK07482 172 HFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLK 251 (461)
T ss_pred ccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 111 1122333221101 03577888875332256899999988888888864 778999999
Q ss_pred hcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 165 EYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+ +|+++|.||++..... . ++.....+|+++++ |.++++. ++|.+++++++.+.+.......
T Consensus 252 ~--~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~--------- 318 (461)
T PRK07482 252 K--YDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVA--KGLTSAYAPLSGSIVGEKVWDVLEQGSDEH--------- 318 (461)
T ss_pred H--hCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEc--cccccCccccceeeecHHHHHHHhcccccC---------
Confidence 9 9999999999764321 1 12223348999886 9997774 7899999999877664321000
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
..+.-+ .+++.++..+++..++++.+.+++ ..++..+..+++.+.|+++ ...... .....+.++.+++.+.
T Consensus 319 ~~~~h~--~T~~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~--~vrG~Glm~giel~~~ 391 (461)
T PRK07482 319 GAIGHG--WTYSGHPICAAAALANLDILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVG--EVRGVGMLAAVEFVAD 391 (461)
T ss_pred CccccC--CCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeeceeEEEEEeccC
Confidence 001112 244567777889999999888764 6667778888888888764 333322 1223556777777321
Q ss_pred C------C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 I------N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~------~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. + ...+...|+++ ||.+.+.. .++.+|+.+...+|++|+|+++++++++++++
T Consensus 392 ~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~~---~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 392 RDDRTPFDPALKIGPQVSAAALER-GVIARAMP---HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred CCcCCCCChhhHHHHHHHHHHHHC-CcEEecCC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 1 24677778776 88875421 25689998888899999999999999999764
No 310
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.85 E-value=4.7e-18 Score=163.23 Aligned_cols=328 Identities=19% Similarity=0.190 Sum_probs=209.0
Q ss_pred CChHHHHHHHccCcCC--C--CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC-----CC-CCe
Q 015729 19 HIPDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL-----SP-GDR 86 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~-----~~-gd~ 86 (401)
.-+|.+.+++.++... + ......+...++.++|.+++.... +.+.++++|++|++.++.. .. .+ ..+
T Consensus 62 h~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ 140 (442)
T PRK13360 62 HGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGL-NHVFFTNSGSESVDTALKIALAYHRARGEGSRTR 140 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcE
Confidence 4456666666554321 1 111123445578888888764222 3589999999999998843 11 12 357
Q ss_pred EEEEcCCcchHHHHHHHHH--------cC---CcEEEEeCCCC---CCC----------ChHHHHHHHhccCCCCceEEE
Q 015729 87 IISFLIGQFSLLWIDQQQR--------LN---FNVDVVESDWG---EGA----------KLDVLASKLAADTAHTIKAIC 142 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~--------~g---~~~~~v~~~~~---~~~----------d~~~le~~~~~~~~~~~~~i~ 142 (401)
|+....+||+.....+.-. .+ ..+..++.... ..+ .++++++.+.....+++.+|+
T Consensus 141 ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavi 220 (442)
T PRK13360 141 LIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVI 220 (442)
T ss_pred EEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9999999998753222110 01 12333443311 001 145788888643224688999
Q ss_pred EEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccc-cCcc--ee--ccCcccceEEEecCCCcccCC-CcceEE
Q 015729 143 IVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI--DF--RMDEWGIDVALTGSQKALSLP-TGMGIV 212 (401)
Q Consensus 143 ~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l 212 (401)
+.......|.+.+ +++|.++|++ +|+++|+|++|. +|.. .+ +.....+|+++++ |.++++ .++|.+
T Consensus 221 vEpi~g~~G~~~~~~~fl~~lr~lc~~--~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~g--K~l~gG~~P~gav 296 (442)
T PRK13360 221 VEPVAGSTGVLIPPKGYLQRLREICDK--HGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCA--KGLTNGAIPMGAV 296 (442)
T ss_pred EccccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCCCccchhhhhcCCCCceeeee--eccccCccceEEE
Confidence 9999988999988 8999999999 999999999984 4321 11 2223347887665 999755 457889
Q ss_pred EecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Q 015729 213 CASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (401)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (401)
.+++++.+.+........ .+..+ .+++.++..+++..++++.+.+++ ..++..++.+++++.|+++
T Consensus 297 ~~~~~i~~~~~~~~~~~~---------~~~~~--~T~~g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l 362 (442)
T PRK13360 297 FVSSEIHDAFMQGPEAGI---------EFFHG--YTYSGHPLACAAALATLDLYEREG---LLTRAARLAPYWEDALHSL 362 (442)
T ss_pred EEcHHHHHHhhcCCcccc---------ccccC--CCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHh
Confidence 999998776643210000 00011 234457777889999999887764 6678888888999988876
Q ss_pred -CCccccCCCccCCceeEEEEcCC--C---CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 293 -GLKNCTQKEEWFSDTVTAVIVPS--H---INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 293 -g~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
....... ....+.+..+.+.. . ....++...|.++ ||.+... ++.+||++...+|++|+|++++++
T Consensus 363 ~~~~~v~~--vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-----~~~lr~~Ppl~~t~~eid~~~~~l 434 (442)
T PRK13360 363 RDAPHVID--IRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEK-GLMIRYT-----GDILALSPPLIIEEAQIDELFDIL 434 (442)
T ss_pred hcCCCeee--eeccceEEEEEEecCCCCcchhHHHHHHHHHHC-CcEEEec-----CCEEEEeCCCccCHHHHHHHHHHH
Confidence 3332221 11233344444411 1 1235677788776 9988642 467999988899999999999999
Q ss_pred HHHHHhc
Q 015729 367 EMILKDV 373 (401)
Q Consensus 367 ~~~l~~~ 373 (401)
+++++++
T Consensus 435 ~~~l~~~ 441 (442)
T PRK13360 435 AQALKET 441 (442)
T ss_pred HHHHHHh
Confidence 9998753
No 311
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=3.2e-18 Score=164.42 Aligned_cols=299 Identities=16% Similarity=0.095 Sum_probs=194.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHcC-----------
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRLN----------- 107 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g----------- 107 (401)
.+...++.++|.+.......+.+.|+++|++|++.++.. .....++|+....+||+.....+....+
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~ 175 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPL 175 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCC
Confidence 345567888888876532224599999999999998843 2334467888888888876333221100
Q ss_pred -CcEEEEeCCCCCC-----CC--------hHHHHH-HHhc-cCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcC
Q 015729 108 -FNVDVVESDWGEG-----AK--------LDVLAS-KLAA-DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYR 167 (401)
Q Consensus 108 -~~~~~v~~~~~~~-----~d--------~~~le~-~~~~-~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~ 167 (401)
-.+..++.+.... -+ .+.+++ .++. ...+++.+|++....+..|.+.+ ++++.++|++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~-- 253 (441)
T PRK05769 176 MPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADK-- 253 (441)
T ss_pred CCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH--
Confidence 1223333321100 01 234565 3332 11246889999988888899888 8999999999
Q ss_pred CCcEEEEeccccc-Ccc--eeccCc--ccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhh
Q 015729 168 HPALFLVDGVSSI-CAI--DFRMDE--WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (401)
Q Consensus 168 ~~~~li~D~a~~~-~~~--~~~~~~--~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
+|+++|+|+++.. |.. .+.... ..+|+++++ |.++++.++|++++++++.......
T Consensus 254 ~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~--K~l~~G~p~gav~~~~~i~~~~~~~----------------- 314 (441)
T PRK05769 254 YGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLA--KAIAGGLPLGAVIGRAELMFLPPGS----------------- 314 (441)
T ss_pred cCCEEEEechhhCCCcccceehhhccCCCCCEEEEc--ccccCCcccEEEEEehhhhhcCCCC-----------------
Confidence 9999999999873 211 112222 246888765 8887666689999998875422100
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcC--CccccCCCccCCceeEEEEcCCCC---
Q 015729 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEEWFSDTVTAVIVPSHI--- 317 (401)
Q Consensus 243 ~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~~--- 317 (401)
.+. .++.++..+++..++++.+.+ +..++..++.++|++.|+++. +.+... ....+.++.+.+.+..
T Consensus 315 ~~~--T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~--vrg~G~~~~i~~~~~~~~~ 386 (441)
T PRK05769 315 HAN--TFGGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGD--VRGLGLMIGVELVKDRKEP 386 (441)
T ss_pred CCC--CCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeee--eecceEEEEEEeccCCccc
Confidence 011 223456667888888888765 467788888889999888752 443321 1234556767662210
Q ss_pred ---CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 318 ---NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 318 ---~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
....+.+.|+++ ||.+.+. ....+||++...+|++|+|+++++++++++++
T Consensus 387 ~~~~~~~~~~~~~~~-Gil~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 387 DPKLRDKVLYEAFKR-GLLLLGA----GKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred cHHHHHHHHHHHHhC-CcEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 134567777766 9887532 23679998888899999999999999998753
No 312
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.85 E-value=2e-18 Score=159.39 Aligned_cols=291 Identities=15% Similarity=0.097 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
.....+++.++.+-|.+. .+.+++|..|+..++.+++++||+|+++...|.+.+ +....+..|+++..++..
T Consensus 63 PT~~~lE~~~a~LEg~~~---~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~--- 136 (396)
T COG0626 63 PTRDALEEALAELEGGED---AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG--- 136 (396)
T ss_pred ccHHHHHHHHHHhhCCCc---EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC---
Confidence 446689999999887766 678899999999999999999999999999777665 556677789988888744
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
+.+++++++.+ +++++|++..|.||+..+.|+++|.++|++ +|+++++|.+.+.+.. .+.-..|+||++.|.
T Consensus 137 --~~~~~~~~~~~---~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~--~g~~vvVDNTfatP~~-q~PL~~GaDIVvhSa 208 (396)
T COG0626 137 --DDEALEAAIKE---PNTKLVFLETPSNPLLEVPDIPAIARLAKA--YGALVVVDNTFATPVL-QRPLELGADIVVHSA 208 (396)
T ss_pred --ChHHHHHHhcc---cCceEEEEeCCCCcccccccHHHHHHHHHh--cCCEEEEECCcccccc-cChhhcCCCEEEEec
Confidence 56666766663 257999999999999999999999999999 8899999999776543 344457899999999
Q ss_pred CCcccCCCcc--eEEEecHHH-HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 200 QKALSLPTGM--GIVCASPKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 200 ~K~l~g~~g~--G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
+|+++|..-+ |++..+++. .+.+... .+-..| ...++. .++..++-++. +.-+.+
T Consensus 209 TKyl~GHsDvl~G~v~~~~~~~~~~~~~~-------------~~~~~G----~~l~p~---dA~l~lRGlkT--L~~Rm~ 266 (396)
T COG0626 209 TKYLGGHSDVLGGVVLTPNEELYELLFFA-------------QRANTG----AVLSPF---DAWLLLRGLRT--LALRME 266 (396)
T ss_pred cccccCCcceeeeEEecChHHHHHHHHHH-------------HHhhcC----CCCCHH---HHHHHHhccch--HHHHHH
Confidence 9999876543 766655544 3333110 000012 234443 22333332222 466888
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC---
Q 015729 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN--- 339 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~--- 339 (401)
+..+++..+.+.|++. .++ +.-+. +. ...+.++.|++.++.++..+.+.|. -+.+....|..
T Consensus 267 ~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~-l~~~a~SlGgveSL 345 (396)
T COG0626 267 RHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLK-LFKLAESLGGVESL 345 (396)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCC-ccEEeccCCCcccc
Confidence 8899999999999874 322 11111 00 0156689999954322334444442 22333333311
Q ss_pred --------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 340 --------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 340 --------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...++.+|+++.. ||++.+++-|+.+++.+
T Consensus 346 i~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 346 ISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred cccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 1134679998654 77788888887777643
No 313
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=4.2e-18 Score=163.91 Aligned_cols=300 Identities=17% Similarity=0.139 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHH-------cCC----
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQR-------LNF---- 108 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~-------~g~---- 108 (401)
+...++.++|.+..+... +.+.|+++|++|++.++.. ......+|+....+||+.....+... .+.
T Consensus 96 ~~~~~lae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 174 (457)
T PRK05639 96 ERAIRVAEKLAEISPIEN-PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM 174 (457)
T ss_pred HHHHHHHHHHHhhCCCCc-CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence 455578888888765332 3599999999999998843 33445678888888998763322211 111
Q ss_pred -cEEEEeCCCCCC--------CCh--------HHHHHHHhcc--CCCCceEEEEEecCCCcccccc----hHHHHHHhhh
Q 015729 109 -NVDVVESDWGEG--------AKL--------DVLASKLAAD--TAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (401)
Q Consensus 109 -~~~~v~~~~~~~--------~d~--------~~le~~~~~~--~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~ 165 (401)
.+..++.+.... -++ +.+++.+... ..+++.+|++...+...|.+.+ ++++.++|++
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~ 254 (457)
T PRK05639 175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE 254 (457)
T ss_pred CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 234444432110 022 2345444221 1257899999998888888765 7889999999
Q ss_pred cCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 166 YRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+|+++|+|+++..... ..+.....+|+++++ |.++++.++|.+++++++.+ .... . +
T Consensus 255 --~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~g--K~l~gG~pi~av~~~~~i~~-~~~~---~-~--------- 316 (457)
T PRK05639 255 --HGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFG--KGVASGMGLSGVIGRKELMD-LTSG---S-A--------- 316 (457)
T ss_pred --cCCEEEEechhhccCcCchHHHHHhcCCCCCEEEec--hhhcCCCcceeEEehHHHHh-hcCC---C-c---------
Confidence 9999999999873211 111122357988864 99987778899999999877 2211 0 0
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC--
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH-- 316 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~-- 316 (401)
+ +++..++..+++..++++.+.+++ ..++..++.++|++.|+++ ++.+... ....+.++.+.+-..
T Consensus 317 ---~--~T~~g~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~--VrG~Gl~~gve~~~~~~ 386 (457)
T PRK05639 317 ---L--LTPAANPVISAAAEATLEIIEEEN---LLKNALKVGEFIKKRLLEMKESFEVIGD--VRGKGLMIGVEIVKENG 386 (457)
T ss_pred ---c--cCCCcCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHhCCCEEe--eccceeEEEEEEecCCC
Confidence 1 123456667788888999887754 6677777888899988874 4544332 123455666665211
Q ss_pred C-C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 I-N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~-~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. + ...+.+.|+++ |+.+.+.. ..++.+||.+...+|++|+|+++++++++++++
T Consensus 387 ~~~~~~~~~~~~~~~~~-Gv~~~~~g--~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 387 KPDPELTGKICWRAFEL-GLILPSYG--MFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred CCCHHHHHHHHHHHHhC-CeEEeecC--CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 1 1 34677777776 99886531 125789999999999999999999999998765
No 314
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.84 E-value=3.7e-18 Score=164.10 Aligned_cols=302 Identities=18% Similarity=0.130 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHcCC------------
Q 015729 43 LTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRLNF------------ 108 (401)
Q Consensus 43 ~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~------------ 108 (401)
...++-+.+.+..+.+....++++++|++|++.++.. .+....+|+...++||+............
T Consensus 85 ~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~ 164 (425)
T PRK08088 85 PYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPG 164 (425)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCC
Confidence 3447777777776654333588999999999988743 23344678888998988763222211110
Q ss_pred cEEEE--eCCCCCCCC----hHHHHHHHhcc-CCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecc
Q 015729 109 NVDVV--ESDWGEGAK----LDVLASKLAAD-TAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 109 ~~~~v--~~~~~~~~d----~~~le~~~~~~-~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a 177 (401)
.+..+ +.+..+ .+ ++.+++.++.. ..++++++++.......|.+.+ +++|.++|++ +|+++|+|++
T Consensus 165 ~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~--~~~~lI~Dev 241 (425)
T PRK08088 165 HVYRALYPCPLHG-VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDE--HGIMLIADEV 241 (425)
T ss_pred CcEEcCCCccccC-ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEecc
Confidence 01111 111111 12 55688888621 1146788888877766676664 7889999999 9999999999
Q ss_pred cccCcc---eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHH
Q 015729 178 SSICAI---DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (401)
Q Consensus 178 ~~~~~~---~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 254 (401)
++.... .+.++..+.+..+.|.+|.++++.++|+++.++++.+.+..... ...++.++.
T Consensus 242 ~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~------------------~~t~~~~~~ 303 (425)
T PRK08088 242 QTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGL------------------GGTYAGNPI 303 (425)
T ss_pred ccCCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCCCCC------------------CCCCCcCHH
Confidence 873211 11111223333345567999877778999999999887754311 113335566
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC--------CCHHHHHH
Q 015729 255 LLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH--------INSSEIVR 324 (401)
Q Consensus 255 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~ 324 (401)
.++++.+.++....+ +..++.++..+++++.|.++ .++.... ....+.++++.++++ ....++..
T Consensus 304 ~~~a~~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~~~~~~~--v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~ 378 (425)
T PRK08088 304 ACAAALAVLKVFEQE---NLLQKANALGEKLKDGLLAIAEKHPEIGD--VRGLGAMIAIELFEDGDHSKPNAKLTAQIVA 378 (425)
T ss_pred HHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEE--EeccceEEEEEEecCCCCCCCCHHHHHHHHH
Confidence 667777777766543 35555555566666666553 2222211 112266788887322 12567888
Q ss_pred HHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 325 RAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+.++ ||.+.++... ++.+|+++...++++|+++.+++|++++...
T Consensus 379 ~~~~~-Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 379 RARDK-GLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred HHHhC-CCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 88776 8887654322 4789998887889999999999999998653
No 315
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.84 E-value=3e-18 Score=157.15 Aligned_cols=321 Identities=17% Similarity=0.159 Sum_probs=207.8
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeE
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRI 87 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~v 87 (401)
...++..+..+.+++.+.+.+... +..+ .+..-++-+.+.+.++.- +.+-|+++||+|...+++. -+...|+|
T Consensus 64 p~ilGH~~p~V~~Av~~~l~~G~~-fg~P--te~Ei~~Aell~~~~p~~--e~vrfvnSGTEAtmsAiRlARa~TgR~kI 138 (432)
T COG0001 64 PLILGHAHPAVVEAVQEQLERGLS-FGAP--TELEVELAELLIERVPSI--EKVRFVNSGTEATMSAIRLARAYTGRDKI 138 (432)
T ss_pred ccccCCCCHHHHHHHHHHHHhcCC-CCCC--CHHHHHHHHHHHHhcCcc--cEEEEecchhHHHHHHHHHHHHhhCCCeE
Confidence 344444444455555555555322 2222 344446778888877652 3499999999999988732 35566899
Q ss_pred EEEcCCcchHHHHHHHH-HcCC-----------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCC
Q 015729 88 ISFLIGQFSLLWIDQQQ-RLNF-----------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETA 149 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~-~~g~-----------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~ 149 (401)
+...-+||++....+.+ ..|. .+..++.+ |++.+++++++.. +++.+|++......
T Consensus 139 ikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g-~~IAaVIvEPv~gn 212 (432)
T COG0001 139 IKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYG-DDIAAVIVEPVAGN 212 (432)
T ss_pred EEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHcC-CcEEEEEeccccCC
Confidence 99999999887212221 1121 22333333 8999999998865 58999999998888
Q ss_pred cccccc----hHHHHHHhhhcCCCcEEEEecccccCcceec----cCcccceEEEecCCCcccCCCcceEEEecHHHHHH
Q 015729 150 TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAIDFR----MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (401)
Q Consensus 150 tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~----~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~ 221 (401)
.|.+.| ++.+.++|++ +|+++|.|++....-..+. .-...+|+.+++ |.++|+.++|.+-+++++++.
T Consensus 213 ~g~i~p~~~Fl~~Lr~lt~e--~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga~gGr~eiM~~ 288 (432)
T COG0001 213 MGVVPPEPGFLEGLRELTEE--HGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGAFGGRAEIMEQ 288 (432)
T ss_pred CCCCCCCHHHHHHHHHHHHH--cCcEEEEecchhhcccCCcccccccCcCcchhhhh--hhhcCCcceeeeccHHHHHhh
Confidence 999887 6789999999 9999999999774433321 112235666655 999999999999999999998
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH----HcCCccc
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVE----AWGLKNC 297 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~----~~g~~~~ 297 (401)
+.+... .+..|+ .+-++..+++-.++++.+.+.. ...++..++.+.|++.|+ +.|++..
T Consensus 289 ~~p~g~------------vyqaGT---~sgnplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~ 351 (432)
T COG0001 289 LAPLGP------------VYQAGT---LSGNPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLT 351 (432)
T ss_pred hCCCCC------------ccccCC---CCCcHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 776531 123353 3455566777788888777631 134444555555555554 4477776
Q ss_pred cCCCccCCceeEEEEcCC-CC---------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHH
Q 015729 298 TQKEEWFSDTVTAVIVPS-HI---------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLA 364 (401)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~-~~---------~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~ 364 (401)
.. +.+..+.+.+.+ +. + ...+.+.|+++ ||++.|..+. ... ++..++++|||+.++
T Consensus 352 v~----~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~~e--a~f----lS~ahte~di~~~~~ 420 (432)
T COG0001 352 VN----RVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQFE--AGF----LSTAHTEEDIDRTLE 420 (432)
T ss_pred Ee----eecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCcccc--cee----eecccCHHHHHHHHH
Confidence 53 223344444422 11 1 12344566666 9988755321 111 333579999999999
Q ss_pred HHHHHHHhc
Q 015729 365 GVEMILKDV 373 (401)
Q Consensus 365 ~i~~~l~~~ 373 (401)
+++++++++
T Consensus 421 a~~~~~~~~ 429 (432)
T COG0001 421 AADEAFKEL 429 (432)
T ss_pred HHHHHHHHh
Confidence 999998765
No 316
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.84 E-value=5.4e-19 Score=165.77 Aligned_cols=282 Identities=16% Similarity=0.138 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCC
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~ 117 (401)
......++++.++++.|.+. .+.+++|+.|+.+++.+++++||+|+++...|.+.. +.......|+++++++.+.
T Consensus 62 ~~P~~~~lE~~la~leg~~~---av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~ 138 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAEH---ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDR 138 (384)
T ss_pred CChhHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCC
Confidence 34667899999999999875 678899999999999999999999999876433333 2356677899999998764
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~ 197 (401)
...++ ++. +++++|++.++.||++.+.|+++|.++|++ ++ +++|++++.+.. ...-..++|++++
T Consensus 139 ~~~~~-------l~~---~~tklv~~e~~snpt~~v~Di~~I~~la~~--~~--lvVD~t~~s~~~-~~pl~~gaDivv~ 203 (384)
T PRK06434 139 LNSLD-------FDP---SNYDLIYAESITNPTLKVPDIKNVSSFCHE--ND--VIVDATFASPYN-QNPLDLGADVVIH 203 (384)
T ss_pred hhhee-------ecC---CCeeEEEEEcCCCCCceeecHHHHHHHHHH--cC--eEEECCCCCccc-CCchhcCCCEEEe
Confidence 22222 222 357999999999999999999999999999 77 467999764432 2223468999999
Q ss_pred cCCCcccCCCc--ceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHH
Q 015729 198 GSQKALSLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENV 274 (401)
Q Consensus 198 s~~K~l~g~~g--~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 274 (401)
|.+|+++|+.. .|.++.++ +..+++.... . ..|. ..+. ..+++-...-.-++.+
T Consensus 204 S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~------------~--~~G~----~~~~-----~~A~l~~~gL~tL~~R 260 (384)
T PRK06434 204 SATKYISGHSDVVMGVAGTNNKSIFNNLVERR------------K--TLGS----NPDP-----IQAYLALRGLKTLGLR 260 (384)
T ss_pred ecccccCCCCCceEEEEecCcHHHHHHHHHHH------------H--hcCC----CCCH-----HHHHHHHhCCCcHHHH
Confidence 99999987553 37776644 4444433110 0 1121 2333 2333332222236788
Q ss_pred HHHHHHHHHHHHHHHHHc-CCc-cccC-------CCccCCceeEEEEcCCCCCHHHHHHHHHhhCC---eEEccCCC---
Q 015729 275 IERHRRLGKATRLAVEAW-GLK-NCTQ-------KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYN---LSLGLGLN--- 339 (401)
Q Consensus 275 ~~~~~~~~~~l~~~L~~~-g~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---i~v~~g~~--- 339 (401)
+++.+++++.+.+.|++. .++ +.-| .-. ..+.++.|.++ + .++. ..+.++.. +.+..|..
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~-g~g~~~sf~l~-~--~~~~-~~f~~~l~l~~~~~slG~~~sl 335 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLR-GFGGMLSFELR-S--MEDV-HKFIRNLEIPMVAASLGGVESL 335 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcC-CCCceEEEEEC-C--HHHH-HHHHHhCCcceEccCCCCCCee
Confidence 999999999999999975 332 1111 111 23568889984 3 2222 23333323 22222211
Q ss_pred --------------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 340 --------------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 340 --------------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
...++.+|||+.. ||.+.+++-|+++|+
T Consensus 336 ~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 336 ITLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred eECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 0123569998644 677778887777764
No 317
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.84 E-value=4.6e-18 Score=164.39 Aligned_cols=303 Identities=19% Similarity=0.162 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHc---------C--
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRL---------N-- 107 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~---------g-- 107 (401)
.+...++.++|.+++.....+.+.|+++|++|++.++.. ......+|+....+||+.....+.... +
T Consensus 96 ~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~ 175 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPF 175 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCC
Confidence 345667888888887543223699999999999998843 234446788888888887632222110 0
Q ss_pred -CcEEEEeCCCCC----CCC--------hHHHHHHHhc-cCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCC
Q 015729 108 -FNVDVVESDWGE----GAK--------LDVLASKLAA-DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHP 169 (401)
Q Consensus 108 -~~~~~v~~~~~~----~~d--------~~~le~~~~~-~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~ 169 (401)
-.+..++..... ... .+.+++.+.. ...+++.+|++...+...|.+.+ +++|.++|++ +|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~--~g 253 (451)
T PRK06918 176 APEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSE--HG 253 (451)
T ss_pred CCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHH--cC
Confidence 012223322110 011 1234444321 11146788888887777787664 7789999999 99
Q ss_pred cEEEEecccccCc---ceeccCccc--ceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcC
Q 015729 170 ALFLVDGVSSICA---IDFRMDEWG--IDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLG 244 (401)
Q Consensus 170 ~~li~D~a~~~~~---~~~~~~~~~--~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 244 (401)
+++|+|+++.... ..+.....+ +|++ +.+|.++++.++|+++.++++.+.+..... +
T Consensus 254 illI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~----------------~ 315 (451)
T PRK06918 254 ILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGAGVPISGVIGRKEIMDESAPGEL----------------G 315 (451)
T ss_pred CEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcCCCccEEEEEcHHHHhccCCCCc----------------C
Confidence 9999999976332 122222233 6765 456999877778999999998776643211 1
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcC-C---CC-
Q 015729 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVP-S---HI- 317 (401)
Q Consensus 245 ~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~-~---~~- 317 (401)
..+..++..+++..++++.+.+.+ ..++..+..+++.+.|+++ ..+....-. ..+.++.+.+. + ..
T Consensus 316 --~T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~vr--g~G~~~~~~~~~~~~~~~~ 388 (451)
T PRK06918 316 --GTYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDVR--GLGAMCAFELVQDRKTKEP 388 (451)
T ss_pred --cCCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceeec--cceeEEEEEEccCCCcCCC
Confidence 133466666778888888876654 4455566667777777664 333221111 12344444441 1 01
Q ss_pred ---CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 318 ---NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 318 ---~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
....+.+.+.++ ||.+.++... ++++|+++...++++++++++++|+++++++
T Consensus 389 ~~~~~~~l~~~~~~~-Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 389 DKTLTANICKEANKR-GLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred cHHHHHHHHHHHHHC-CeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 134566666665 9999876322 4789998776789999999999999999765
No 318
>PRK15029 arginine decarboxylase; Provisional
Probab=99.84 E-value=3.2e-18 Score=170.49 Aligned_cols=302 Identities=10% Similarity=0.013 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC-
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG- 118 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 118 (401)
+...+.+.++..|++||++.. .++++|+|.+|.+++.+.+++||+|++.-++|-|.. ......|++++++....+
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t--~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~--~al~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRS--WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE--QGLILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcE--EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH--HHHHHcCCeEEEecccccc
Confidence 345688999999999999874 678999999999999999999999999999988876 346678999999875431
Q ss_pred ----CCCC-----hHHHHHHHhccCC------CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCc-
Q 015729 119 ----EGAK-----LDVLASKLAADTA------HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA- 182 (401)
Q Consensus 119 ----~~~d-----~~~le~~~~~~~~------~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~- 182 (401)
+.++ ++.+++++++++. .+++++++++| |..|.+.++++|+++|++ ++++|++|+||+...
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~--~~~~llvDEAhGah~~ 355 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEK--TSDRLHFDEAWYGYAR 355 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHh--cCCeEEEECccccccc
Confidence 2344 8999999977542 23448888876 568999999999999999 999999999987421
Q ss_pred ----cee-c-c-----Ccccce-EEEecCCCcccCCCcceEEEecHH--HHH--HhccCCCCccccchHHHHHHhhcCCC
Q 015729 183 ----IDF-R-M-----DEWGID-VALTGSQKALSLPTGMGIVCASPK--ALE--ASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 183 ----~~~-~-~-----~~~~~d-i~~~s~~K~l~g~~g~G~l~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
++. . . ...|+| +++.|.||++.+....+++.++.. .++ ++. .....+
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~------------~~l~~~----- 418 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFN------------QAYMMH----- 418 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHH------------HHHHHH-----
Confidence 111 1 1 125788 899999999988887788887543 111 111 111111
Q ss_pred CCCCCcHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHc-C-------------------------------
Q 015729 247 WPYTPSIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-G------------------------------- 293 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g------------------------------- 293 (401)
.+.+|+...++++..|...+.. .| +...++..+....+++.++++ +
T Consensus 419 qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 497 (755)
T PRK15029 419 ATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFAD 497 (755)
T ss_pred cCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccc
Confidence 2346888889999999988775 45 667778888888888888765 3
Q ss_pred -----------CccccCCCc------------cCCceeEEEEcCC-C---------CCHHHHHHHHHhhCCeEEccCCCC
Q 015729 294 -----------LKNCTQKEE------------WFSDTVTAVIVPS-H---------INSSEIVRRAWQRYNLSLGLGLNK 340 (401)
Q Consensus 294 -----------~~~~~~~~~------------~~~~~~~~~~~~~-~---------~~~~~l~~~L~~~~~i~v~~g~~~ 340 (401)
+.+..++.. ...+.-+.+..+. + +++..+.+.| +++||.+....
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L-~~~gI~~E~~~-- 574 (755)
T PRK15029 498 APTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTRTT-- 574 (755)
T ss_pred cchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHH-HHcCCEEEecC--
Confidence 111211000 0123334444421 2 3344888888 56699876442
Q ss_pred CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 341 VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 341 ~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
...+-+-+....+++++++++++|.++-+
T Consensus 575 --~~~vL~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 575 --DFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred --CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 22333323345789999999999988744
No 319
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.84 E-value=6.9e-18 Score=162.48 Aligned_cols=324 Identities=13% Similarity=0.128 Sum_probs=203.2
Q ss_pred CChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCC-CCceE-EecCChhHHHHHHHhc--cCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTT-SGTPF-LIPTTGTGAWESALTN--TLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~-~~~~i-~~~~g~t~a~~~~~~~--~~~~gd~vl~~ 90 (401)
.-+|.+.+++.++... +......+...++.++|.+..... ....+ .++++|++|++.++.- ......+|+..
T Consensus 55 h~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~ 134 (442)
T TIGR00709 55 HNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISF 134 (442)
T ss_pred CCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3445566665554321 111122355667888888876532 11234 4468999999998843 23444678888
Q ss_pred cCCcchHHHHHHHHH------cC-----CcEEEEeCCCCCCC--------Ch----HHHHHHHhc--cCCCCceEEEEEe
Q 015729 91 LIGQFSLLWIDQQQR------LN-----FNVDVVESDWGEGA--------KL----DVLASKLAA--DTAHTIKAICIVH 145 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~------~g-----~~~~~v~~~~~~~~--------d~----~~le~~~~~--~~~~~~~~i~~~~ 145 (401)
..+||+.....+... .+ ..+..++.+..... +. +.+++.++. ...+++.++++..
T Consensus 135 ~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Ep 214 (442)
T TIGR00709 135 SGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEA 214 (442)
T ss_pred cCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEcc
Confidence 888888763222211 11 12233333211111 11 223444431 1113678899998
Q ss_pred cCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---eecc--CcccceEEEecCCCcccCCCcceEEEecH
Q 015729 146 NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRM--DEWGIDVALTGSQKALSLPTGMGIVCASP 216 (401)
Q Consensus 146 ~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~--~~~~~di~~~s~~K~l~g~~g~G~l~~~~ 216 (401)
+++..|.+.+ ++++.++|++ +|+++|.|+++..... .+.. ....+|+++++ |.++++.++|.++.++
T Consensus 215 i~g~~G~~~~~~~yl~~lr~lc~~--~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~~G~Pigav~~~~ 290 (442)
T TIGR00709 215 IQGEGGVVAAPSEWLQKIREVTRK--HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMS--KAVGGGLPLAVLLIAP 290 (442)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEc--ccccCCcccEEEEEch
Confidence 8888787753 7889999999 9999999999873321 1111 22347888865 9998777789999988
Q ss_pred HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CC
Q 015729 217 KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GL 294 (401)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~ 294 (401)
+ .+.+... ....+++.++..+++..++++.+.+++ ..++..++.+++.+.|+++ .+
T Consensus 291 ~-~~~~~~~------------------~~~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~ 348 (442)
T TIGR00709 291 E-FDAWQPA------------------GHTGTFRGNQLAMVTGTEALNYWKDDN---LAQNAQERGERITSFLDDMIKEH 348 (442)
T ss_pred H-HhccCCC------------------cCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhC
Confidence 8 4444211 011134566777888889998887654 6668888888888888875 34
Q ss_pred ccccCCCccCCceeEEEEcCCCC--------------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHH
Q 015729 295 KNCTQKEEWFSDTVTAVIVPSHI--------------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLL 360 (401)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~ 360 (401)
..... ....+.++.+++.+.. -...+...++++ ||.+.+... .++.+|+.+...+|++|+|
T Consensus 349 ~~v~~--vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~--~~~~l~~~Ppl~it~~ei~ 423 (442)
T TIGR00709 349 PCIGN--VRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN-GLLLETGGR--EGEVFRLLCPITIDQEECE 423 (442)
T ss_pred CCeee--eeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC-CeEEeecCC--CCCEEEEECCCCCCHHHHH
Confidence 43322 2245667777773210 023566667666 998865322 2678999888899999999
Q ss_pred HHHHHHHHHHHhc
Q 015729 361 GCLAGVEMILKDV 373 (401)
Q Consensus 361 ~~~~~i~~~l~~~ 373 (401)
+++++++++++++
T Consensus 424 ~~~~~l~~~l~~~ 436 (442)
T TIGR00709 424 EGISRFKQAVEEA 436 (442)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 320
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=9.3e-18 Score=161.93 Aligned_cols=304 Identities=16% Similarity=0.062 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C------CCCCeEEEEcCCcchHHHHHHHHHcCC----
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L------SPGDRIISFLIGQFSLLWIDQQQRLNF---- 108 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~------~~gd~vl~~~~~~~~~~~~~~~~~~g~---- 108 (401)
.+...++.++|.++..... +.+.|+++|++|++.++... . ....+|+....+||+.....+.. .+.
T Consensus 89 ~~~~~~lae~L~~~~p~~~-~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~-~~~~~~~ 166 (466)
T PRK07030 89 HEPVIELSERLVKITPPGL-SRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSV-GDVALFT 166 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhc-cCCcccc
Confidence 3556678888888764222 35999999999999988432 1 12357888888888876332221 111
Q ss_pred --------cEEEEeCCCCCC------------CChHHHHHHHhccCCCCceEEEEEe-cCCCcccccc----hHHHHHHh
Q 015729 109 --------NVDVVESDWGEG------------AKLDVLASKLAADTAHTIKAICIVH-NETATGVTNN----LSKVRKLL 163 (401)
Q Consensus 109 --------~~~~v~~~~~~~------------~d~~~le~~~~~~~~~~~~~i~~~~-~~n~tG~~~~----l~~i~~l~ 163 (401)
.+..++...... -+++.+++.+++.. +++.++++.. ++...|.+.+ ++++.++|
T Consensus 167 ~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~-~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc 245 (466)
T PRK07030 167 ETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHH-DEIAAVIVEPLIQGAGGMRMYHPVYLKLLREAC 245 (466)
T ss_pred ccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCC-CceEEEEEecccccCCCcccCCHHHHHHHHHHH
Confidence 122333221100 02466788886543 5789999998 5777788764 78899999
Q ss_pred hhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 164 DEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
++ +|+++|.||++..... .+ +.....+|+++++ |.++++ .++|.+++++++.+.+.......
T Consensus 246 ~~--~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~-------- 313 (466)
T PRK07030 246 DR--YGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLS--KALTGGYLPLAAVLTTDTVYQAFYDDYPTL-------- 313 (466)
T ss_pred HH--cCCEEEEeehhhCcCccccchHHHhcCCCCCEEeee--hhccCCcccceEEEecHHHHHHHhcccccc--------
Confidence 99 9999999999763211 11 2223348999886 999877 37899999999987664211000
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH 316 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
..+..++ +++.++..+++..++++.+.+++ ..++..+..+++++.|+++ ...... +....+.++.+++.+.
T Consensus 314 -~~~~h~~--T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~--~vrG~Gl~~gie~~~~ 385 (466)
T PRK07030 314 -RAFLHSH--SYTGNPLACAAALATLDIFEQDN---VIENNRALARRMAEATAHLADHPHVA--EVRQTGMILAIEMVQD 385 (466)
T ss_pred -cccccCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEE--EeEeceeEEEEEeccC
Confidence 0001122 33456777888899999988754 6778888899999999886 333222 1224566777776221
Q ss_pred C--------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 I--------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~--------~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. + ...+.+.++++ |+.+.+. ++.+|+.+...+|++|+|+++++++++++++
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-----g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 386 KASKTPYPWQERRGLKVYQHALER-GALLRPL-----GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccccccCcchhHHHHHHHHHHHHC-CeEEEec-----CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 0 0 13577777766 9988642 4689998888899999999999999999887
No 321
>PRK07678 aminotransferase; Validated
Probab=99.83 E-value=8.9e-18 Score=161.87 Aligned_cols=307 Identities=13% Similarity=0.086 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C-----CCC-CeEEEEcCCcchHHHHHHHHHcC------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L-----SPG-DRIISFLIGQFSLLWIDQQQRLN------ 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~-----~~g-d~vl~~~~~~~~~~~~~~~~~~g------ 107 (401)
+...++.++|.+.++.. ..+.|+++|++|++.++... . +++ .+|+....+||+.....+.. .+
T Consensus 89 ~~~~~lae~l~~~~~~~--~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~-~~~~~~~~ 165 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGE--YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAA-TGQAQRKY 165 (451)
T ss_pred HHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhc-CCCccccc
Confidence 44567888888887543 35899999999999988431 1 122 57888888888876322221 11
Q ss_pred ------CcEEEEeCCCCCCC---------C---hHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhh
Q 015729 108 ------FNVDVVESDWGEGA---------K---LDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (401)
Q Consensus 108 ------~~~~~v~~~~~~~~---------d---~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~ 165 (401)
..+..++.+..... | .+.+++.++....+++.+|++.......|.+.+ ++++.++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~ 245 (451)
T PRK07678 166 KYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQK 245 (451)
T ss_pred ccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 11223332211111 1 233566675322257899999988888888875 7889999999
Q ss_pred cCCCcEEEEecccc-cCcc--eeccC--cccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 166 YRHPALFLVDGVSS-ICAI--DFRMD--EWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 166 ~~~~~~li~D~a~~-~~~~--~~~~~--~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
+|+++|+||++. +|-. .+..+ ...+|+++++ |.++++ .++|.+.+++++.+.+.......
T Consensus 246 --~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~g--K~lggG~~Pi~av~~~~~i~~~~~~~~~~~---------- 311 (451)
T PRK07678 246 --HGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMA--KGITSAYLPLSATAVKKEIYEAFKGKGEYE---------- 311 (451)
T ss_pred --cCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEee--cccccCCcceeEEEEcHHHHHHHhccCccc----------
Confidence 999999999985 3321 11222 2347888875 999876 47899999999987765321000
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC-
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
.+..+ .+++.++..+++..++++.+.+++ ..++..++.+++++.|+++ ....... ....+.++.+.+.+.
T Consensus 312 ~~~h~--~T~~gnp~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~--vrg~Gl~~~i~~~~~~ 384 (451)
T PRK07678 312 HFRHV--NTFGGNPAACALALKNLEIMENEN---LIERSAQLGELLLEQLKEELGEHPLVGD--IRGKGLLVGIELVNDK 384 (451)
T ss_pred ccccC--CCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEE--EEeeceEEEEEEecCC
Confidence 00011 244566778888999999887754 6677788888888888653 3333221 123455666766211
Q ss_pred -----CC---HHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 -----IN---SSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 -----~~---~~~l~~~L~~~~~i~v~~g~~--~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.+ ..++...|.++ ||.+.+... +..++.+|+++...+|++|||+++++++++++++
T Consensus 385 ~~~~~~~~~~a~~i~~~l~~~-Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 385 ETKEPADNDKVASVVAACKEK-GLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred cccCcCchHHHHHHHHHHHHC-CcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 01 34677777776 998865321 1224679999888899999999999999999765
No 322
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.83 E-value=6.4e-18 Score=161.83 Aligned_cols=324 Identities=12% Similarity=0.081 Sum_probs=206.3
Q ss_pred CChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-------CC-CCe
Q 015729 19 HIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDR 86 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-------~~-gd~ 86 (401)
.-+|++.+++.+.... .......+...++.+++++..+... +.+.++++|++|++.++.... .+ ..+
T Consensus 61 h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~-~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~ 139 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNAL-DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQK 139 (427)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccE
Confidence 4445566555553321 1111123445677788888765332 359999999999998884311 12 367
Q ss_pred EEEEcCCcchHHHHHHHHHcCC-------------cEEEEeCCCCC------CCChHHHHHHHhccCCCCceEEEEEec-
Q 015729 87 IISFLIGQFSLLWIDQQQRLNF-------------NVDVVESDWGE------GAKLDVLASKLAADTAHTIKAICIVHN- 146 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~------~~d~~~le~~~~~~~~~~~~~i~~~~~- 146 (401)
|+....+||+.....+.. .+- ....++..... .-|.+++++.+.+.. +++++|++...
T Consensus 140 il~~~~~yHG~t~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~-~~vaavivEPv~ 217 (427)
T TIGR00508 140 FLTIRSGYHGDTFGAMSV-CDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHS-DEIAAVILEPIV 217 (427)
T ss_pred EEEEcCCcCCccHhhhcc-cCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcC-CcEEEEEEechh
Confidence 999999999875322221 110 11122221110 114567788886543 46788888875
Q ss_pred CCCccccc----chHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcccceEEEecCCCcccCC-CcceEEEecH
Q 015729 147 ETATGVTN----NLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASP 216 (401)
Q Consensus 147 ~n~tG~~~----~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~ 216 (401)
++..|... .++++.++|++ +|+++|+|++|..... ..+.....+|++++ .|.++|+ ..++.++.++
T Consensus 218 ~g~gG~~~~~~~~l~~l~~lc~~--~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~--gK~l~gG~~p~~a~~~~~ 293 (427)
T TIGR00508 218 QGAGGMRFYHPTYLKRVQALCKQ--YDILLIADEIATGFGRTGKLFACEHAGVVPDILCV--GKALTGGYMTLSATVTTD 293 (427)
T ss_pred cCcCCcccCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCCccchhhhcCCCCCEEEe--chhhhcCcccceEEEEcH
Confidence 55556544 47889999999 9999999999852211 11112335788875 5999766 3678899999
Q ss_pred HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCcc
Q 015729 217 KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN 296 (401)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~ 296 (401)
++.+.+.......+. .++ +++.++..++++.++++.+.+++ ..++.+++.+++++.|++++...
T Consensus 294 ~~~~~~~~~~~~~~~-----------~~~--T~~g~p~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~ 357 (427)
T TIGR00508 294 KVAQTISSGEAGCFM-----------HGP--TFMGNPLACAVAEASLAILLEGE---WQKQVSAIENQLKRELSPLRKNP 357 (427)
T ss_pred HHHHHHhcCCCCccc-----------cCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCC
Confidence 987777532110000 011 22346777788889999887654 46888889999999998873221
Q ss_pred ccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 297 CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.. ......+.++.+.+.+..+...+.+.|.++ ||.+.+. +..+|+++...+|++|||++++++++++.+
T Consensus 358 ~i-~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~-Gv~~~~~-----~~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 358 VV-KDVRVLGAIGVVEMYKPVNVEELQKKFVEQ-GVWIRPF-----GKLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CE-EeEeccccEEEEEECCccCHHHHHHHHHHC-CeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 11 111123556777774434567888899877 9988643 347999888889999999999999999864
No 323
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.83 E-value=7.2e-18 Score=160.96 Aligned_cols=299 Identities=15% Similarity=0.101 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C-----CC-CCeEEEEcCCcchHHHHHHHHHcC------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L-----SP-GDRIISFLIGQFSLLWIDQQQRLN------ 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~-----~~-gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (401)
+...++.++|.+..+... +.+.|+++|++|++.++... . .+ ..+|+....+||+.....+....+
T Consensus 83 ~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~ 161 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGL-DHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHS 161 (422)
T ss_pred HHHHHHHHHHHhhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccc
Confidence 445678888888764322 35999999999999988431 1 12 357899998899865322221100
Q ss_pred ------CcEEEEeCCCCCCCC-------hHHHHHHHhccCCCCceEEEEEec-CCCcccccc----hHHHHHHhhhcCCC
Q 015729 108 ------FNVDVVESDWGEGAK-------LDVLASKLAADTAHTIKAICIVHN-ETATGVTNN----LSKVRKLLDEYRHP 169 (401)
Q Consensus 108 ------~~~~~v~~~~~~~~d-------~~~le~~~~~~~~~~~~~i~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~ 169 (401)
-....++.+.....+ .+.+++.+. +++.+|++... +...|...+ ++++.++|++ +|
T Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~--~g 235 (422)
T PRK05630 162 LWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDK--HD 235 (422)
T ss_pred cccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHH--cC
Confidence 122333332211111 234455454 36789999985 777787654 7889999999 99
Q ss_pred cEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 170 ALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 170 ~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
+++|+||++..... . ++.....+|+++++ |.++|+ ..+|.+++++++.+.+....... .+.-
T Consensus 236 ~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~g--K~l~gG~~p~~av~~~~~i~~~~~~~~~~~----------~~~h 303 (422)
T PRK05630 236 ILLIADEIATGFGRTGELFATLAAGVTPDIMCVG--KALTGGFMSFAATLCTDKVAQLISTPNGGG----------ALMH 303 (422)
T ss_pred CEEEEecceeCCCcCchhhHHHhcCCCCCeeeee--chhhcCccccceeeccHHHHHHHhccCCCC----------cccc
Confidence 99999999863221 1 12223347888664 999665 46799999999877664210000 0111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHH
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (401)
++ +++.++..+++..++++.+.+++ ..++..++.+++++.|+++ ..+.+. +....+.++.+++.+..+...+
T Consensus 304 ~~--T~~g~Pla~aaa~aaL~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~v~--~vRg~Gl~~~ie~~~~~~~~~~ 376 (422)
T PRK05630 304 GP--TFMANPLACAVAHASLEIIETGM---WRKQVKRIEAELIAGLSPLAHLPGVA--DVRVLGAIGVVEMEQPVDMEEA 376 (422)
T ss_pred CC--CCcCCHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHhhcCCCee--eeeccccEEEEEECCcccHHHH
Confidence 22 34567778888999999987754 4567788888888888765 222222 1223466788888443346688
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 323 ~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.++++ |+.+.+. ++.+||.+...+|++|+|+++++++++++.
T Consensus 377 ~~~~~~~-Gl~~~~~-----g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 377 TQAAVDH-GVWLRPF-----GRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHC-CeEEEec-----CCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 8888876 9988642 468999888899999999999999999863
No 324
>PRK06917 hypothetical protein; Provisional
Probab=99.83 E-value=2e-17 Score=159.14 Aligned_cols=307 Identities=13% Similarity=0.057 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--------CCCCCeEEEEcCCcchHHHHHHHHHcCC----
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--------LSPGDRIISFLIGQFSLLWIDQQQRLNF---- 108 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--------~~~gd~vl~~~~~~~~~~~~~~~~~~g~---- 108 (401)
.+...++.++|.+.+.... +.+.|+++||+|++.++... .....+|+....+||+.....+.. .+.
T Consensus 73 ~~~~~~lae~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~-~~~~~~~ 150 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDL-NWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSM-SGHPLRR 150 (447)
T ss_pred CHHHHHHHHHHHHhCCCCC-CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHh-cCCcccc
Confidence 3556678888888775432 35899999999999988532 122367888888888876333321 111
Q ss_pred --------cEEEEeCCCCCC--C----------ChHHHHHHHhccCCCCceEEEEEecCCC-cccccc----hHHHHHHh
Q 015729 109 --------NVDVVESDWGEG--A----------KLDVLASKLAADTAHTIKAICIVHNETA-TGVTNN----LSKVRKLL 163 (401)
Q Consensus 109 --------~~~~v~~~~~~~--~----------d~~~le~~~~~~~~~~~~~i~~~~~~n~-tG~~~~----l~~i~~l~ 163 (401)
.+..++.+.... . +++.+++.+++...+++.+|++...... .|.+.+ ++++.++|
T Consensus 151 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc 230 (447)
T PRK06917 151 QRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEIC 230 (447)
T ss_pred ccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHH
Confidence 112222111100 0 2457777776543346899999987654 456554 77899999
Q ss_pred hhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCCCCccccchHHH
Q 015729 164 DEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
++ +|+++|+||++..... .+ ......+|+++++ |.++++. ++|.+.+++++.+.+..... .
T Consensus 231 ~~--~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~g--K~l~~G~~Pi~a~~~~~~i~~~~~~~~~-~-------- 297 (447)
T PRK06917 231 DH--YDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLG--KGLGAGYTPIAATVVSDRVMEPILRGSR-S-------- 297 (447)
T ss_pred HH--cCCEEEEechhhCcCcccchhhHHhcCCCCCEEEee--ehhccCCcceEEEEEcHHHHHHHhccCc-c--------
Confidence 99 9999999999863211 11 1123347888775 9997764 68999999998776643210 0
Q ss_pred HHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcC-
Q 015729 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVP- 314 (401)
Q Consensus 238 ~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~- 314 (401)
+..++ +++.++..+++..++++.+.+++ ..++..++.++|++.|+++ ...+.. .....+.++.+++-
T Consensus 298 ---~~~~~--T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Gl~~~ie~~~ 367 (447)
T PRK06917 298 ---IMSGH--TLSANPLSAATALAVLEYMEKHN---LPEKAAEKGEYLIKGLQKVQQQSTIIG--DVRGKGLLIGVEFVA 367 (447)
T ss_pred ---ccccc--CCCCCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeecceEEEEEEec
Confidence 00111 33456677888899999887654 6778888888888888875 243322 12235566767662
Q ss_pred CC-----C-----CHHHHHHHHHhhCCeEEccCCC---CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 315 SH-----I-----NSSEIVRRAWQRYNLSLGLGLN---KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 315 ~~-----~-----~~~~l~~~L~~~~~i~v~~g~~---~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+. . -...+.+.++++ ||.+.+... ...++.+|+++...+|++|+|+++++++++++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 368 DKKTKQPFSKSQAVASELISVAAKN-GLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred cCCcCCCCcchhHHHHHHHHHHHhC-CcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 11 0 134567777766 999875421 1125689998888899999999999999999765
No 325
>PRK07483 hypothetical protein; Provisional
Probab=99.83 E-value=1.2e-17 Score=160.48 Aligned_cols=339 Identities=15% Similarity=0.100 Sum_probs=210.2
Q ss_pred cccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cC-----C
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TL-----S 82 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~-----~ 82 (401)
+.+++.++..+.+++.+.+.+....+......+...++.++|.+...... +.+.|+++|++|++.++.. .. +
T Consensus 41 ~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~~~~~g~ 119 (443)
T PRK07483 41 VSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGL-EHVYFVSGGSEAVEAALKLARQYFVEIGQ 119 (443)
T ss_pred hhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC-CEEEEcCCcHHHHHHHHHHHHHHHHhcCC
Confidence 33444444444444445544321111111223445677788887764322 3599999999999998842 12 1
Q ss_pred CC-CeEEEEcCCcchHHHHHHHHH--------cC---CcEEEEeCCCCCCC-------------ChHHHHHHHhccCCCC
Q 015729 83 PG-DRIISFLIGQFSLLWIDQQQR--------LN---FNVDVVESDWGEGA-------------KLDVLASKLAADTAHT 137 (401)
Q Consensus 83 ~g-d~vl~~~~~~~~~~~~~~~~~--------~g---~~~~~v~~~~~~~~-------------d~~~le~~~~~~~~~~ 137 (401)
++ .+|+....+||+.....+... .+ ..+..++.....+. .++++++.+.+...++
T Consensus 120 ~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 199 (443)
T PRK07483 120 PQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDT 199 (443)
T ss_pred CCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 23 568888888888763222211 00 01223332211110 0256776665322246
Q ss_pred ceEEEEEecCC-Ccccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCC
Q 015729 138 IKAICIVHNET-ATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPT 207 (401)
Q Consensus 138 ~~~i~~~~~~n-~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~ 207 (401)
+.+|++...+. ..|.+.+ ++.+.++|++ +|+++|+||++..... .+ +.....+|+++++ |.++++.
T Consensus 200 iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~--~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~ 275 (443)
T PRK07483 200 VAAFVAETVVGATAGAVPPVPGYFKRIREVCDR--YGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIA--KGLGAGY 275 (443)
T ss_pred eEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHH--hCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeeh--hhhccCc
Confidence 88999998875 3576664 7889999999 9999999999763321 11 1123347888886 9998774
Q ss_pred -cceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 015729 208 -GMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATR 286 (401)
Q Consensus 208 -g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~ 286 (401)
++|.+++++++.+.+.... . .+..++ +++.++..+++..++++.+.+++ ..++..+..++|+
T Consensus 276 ~Pi~av~~~~~i~~~~~~~~-~-----------~~~h~~--T~~gnpl~~aaa~a~l~~i~~~~---l~~~~~~~g~~l~ 338 (443)
T PRK07483 276 QPIGAVLASDRIYDAIADGS-G-----------FFQHGH--TYLGHATACAAALAVQRVIAEDG---LLANVRARGEQLR 338 (443)
T ss_pred cccEEEEEcHHHHHHHhcCC-C-----------ccccCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHH
Confidence 7899999999877664310 0 011122 33456677888899999888754 6777888888888
Q ss_pred HHHHHc--CCccccCCCccCCceeEEEEcCCC------CC-----HHHHHHHHHhhCCeEEccCCC---CCCCcEEEEee
Q 015729 287 LAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH------IN-----SSEIVRRAWQRYNLSLGLGLN---KVAGKVFRIGH 350 (401)
Q Consensus 287 ~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~------~~-----~~~l~~~L~~~~~i~v~~g~~---~~~~~~~Ri~~ 350 (401)
+.|+++ ..+.... ....+.++.+++.+. .+ ...+.+.++++ |+.+.+... ...++.+||.+
T Consensus 339 ~~L~~l~~~~~~i~~--vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~~~~~~~~~~~l~~~P 415 (443)
T PRK07483 339 ARLRERLGQHPHVGD--IRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR-GLMVYPMGGTIDGVRGDHVLLAP 415 (443)
T ss_pred HHHHHHHhcCCCeee--EeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC-CcEEEecCccccCCCCCEEEEEC
Confidence 888764 4443221 223455666766211 01 24577777776 998865421 11256899998
Q ss_pred cccCCHHHHHHHHHHHHHHHHhc
Q 015729 351 LGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 351 ~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...+|++|+|+++++++++++++
T Consensus 416 pL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 416 PFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999753
No 326
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.83 E-value=1.1e-17 Score=161.28 Aligned_cols=326 Identities=16% Similarity=0.093 Sum_probs=207.5
Q ss_pred CChHHHHHHHccCcCC--C--CCccHHHHHHHHHHHHHHHhcCC----CCceEEecCChhHHHHHHHhcc--C-----CC
Q 015729 19 HIPDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTT----SGTPFLIPTTGTGAWESALTNT--L-----SP 83 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~----~~~~i~~~~g~t~a~~~~~~~~--~-----~~ 83 (401)
.-+|++.+++.++... + ......+...++-++|.+.+... .-+.+.|+++|++|++.++... . ++
T Consensus 80 h~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~ 159 (472)
T PRK08742 80 HAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEH 159 (472)
T ss_pred CCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCC
Confidence 3456666666554321 1 11112344567778887776431 1246999999999999988431 1 12
Q ss_pred -CCeEEEEcCCcchHHHHHHHHHcCC------------cEEEEeCCCCCC------------CChHHHHHHHhccCCCCc
Q 015729 84 -GDRIISFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEG------------AKLDVLASKLAADTAHTI 138 (401)
Q Consensus 84 -gd~vl~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~------------~d~~~le~~~~~~~~~~~ 138 (401)
..+|+....+||+.....+.. .+. .+..++.+.... .+++.+++.++... +++
T Consensus 160 ~r~~ii~~~~syHG~t~gals~-~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~i 237 (472)
T PRK08742 160 RRTRFIALENGYHGETIGALAV-GDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSP-GEI 237 (472)
T ss_pred CCcEEEEECCCcCCCchhhhhc-cCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCC-Cce
Confidence 367899999888876322221 111 123333322111 12567777776433 578
Q ss_pred eEEEEEe-cCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCC-
Q 015729 139 KAICIVH-NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPT- 207 (401)
Q Consensus 139 ~~i~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~- 207 (401)
.+|++.. ..+..|.+.+ ++++.++|++ +|+++|.||++..... .+ +.....+|+++++ |.++|+.
T Consensus 238 AAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~--~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~g--Kgl~gG~~ 313 (472)
T PRK08742 238 CALILEPRLQCAGGMRMHHPAYLRRARELCDA--HGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLS--KGLTGGFL 313 (472)
T ss_pred EEEEEccccccCCCcccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEc--ccccCCCC
Confidence 8999987 4777787664 7889999999 9999999999763311 11 2223347998886 9997773
Q ss_pred cceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 015729 208 GMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRL 287 (401)
Q Consensus 208 g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~ 287 (401)
++|.+++++++.+.+........ +.-++ +++.++..+++..++++.+.+++ ..++..+..+++.+
T Consensus 314 Plaav~~~~ei~~~~~~~~~~~~----------~~h~~--T~~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~ 378 (472)
T PRK08742 314 PLSAVLATQQLYDAFLDDSRERA----------FLHSH--SYTGNPLACAAALATLDIFADDD---VIARNQPTAARMTQ 378 (472)
T ss_pred CcceeeccHHHHHHhhccCccCc----------cCcCC--CCCccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHH
Confidence 78999999998776642110000 00122 34456777889999999988765 55666666777776
Q ss_pred HHHHc-CCccccCCCccCCceeEEEEcCCC-C-----C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCC
Q 015729 288 AVEAW-GLKNCTQKEEWFSDTVTAVIVPSH-I-----N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLN 355 (401)
Q Consensus 288 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~-----~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~ 355 (401)
.++.+ .+.... +....+.++.+++... . + ...+.+.++++ ||.+.+. ++.+||.+...+|
T Consensus 379 ~~~~~~~~~~i~--dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----g~vi~~~PpL~it 450 (472)
T PRK08742 379 LAAQIGEHPHVA--DVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALAR-GVVLRPL-----GDVLYWMPPYCVD 450 (472)
T ss_pred HHHHHhcCCCee--eEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHC-CeEEEec-----CCEEEEECCCCCC
Confidence 66554 333322 2234566777777321 0 1 13566777766 9988642 4689999888999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 015729 356 ELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 356 ~~di~~~~~~i~~~l~~~ 373 (401)
++|+|+++++++++++++
T Consensus 451 ~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 451 EAQLALLADTTRHAIDEA 468 (472)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999764
No 327
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.82 E-value=2.6e-17 Score=154.10 Aligned_cols=302 Identities=14% Similarity=0.088 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES------ 115 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~------ 115 (401)
..+.++++.+++++|.+. ++.+++||.|++++....+++||.| +.+.++.... ......|+..+.+..
T Consensus 78 ~s~~~LE~~vAe~lG~e~---aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~-ahI~~~Ga~fvDi~~d~a~~~ 151 (460)
T PRK13237 78 RNFYHLEETVQEYYGFKH---VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTR-YHQELNGGIFVDIIIDEAHDA 151 (460)
T ss_pred CcHHHHHHHHHHHHCCCe---EEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhH-HHHHhCCcEEEeeeccccccc
Confidence 446699999999999987 8999999999998766678999965 5454554432 223556775444421
Q ss_pred ----CCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc-cccc---chHHHHHHhhhcCCCcEEEEecccccCccee--
Q 015729 116 ----DWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTN---NLSKVRKLLDEYRHPALFLVDGVSSICAIDF-- 185 (401)
Q Consensus 116 ----~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-G~~~---~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-- 185 (401)
+.++.+|++.+++.+++....++.++.+..++|.. |... ++++|.++|++ +|+.||.|+|+.++...+
T Consensus 152 ~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~--~Gl~Vi~DaAra~gna~fI~ 229 (460)
T PRK13237 152 QSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDK--HGIKVFFDATRCVENAYFIK 229 (460)
T ss_pred ccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHH--cCCEEEEECcchhcChhhhc
Confidence 23568999999999986433455667777777777 5665 57899999999 999999999998874321
Q ss_pred ----cc--Cc---------ccceEEEecCCCcccCCCcceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCC
Q 015729 186 ----RM--DE---------WGIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (401)
Q Consensus 186 ----~~--~~---------~~~di~~~s~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 249 (401)
.. .. -..|+.++|.+|.+.++.| |++++++ ++.++++...... -|.-..+
T Consensus 230 ~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~-------------eG~~tyg 295 (460)
T PRK13237 230 EREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVY-------------EGMPSYG 295 (460)
T ss_pred ccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhcccc-------------CCCcCCC
Confidence 11 11 1479999999999977766 6776654 5556555432210 0110011
Q ss_pred CCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc----C----CCCCHHH
Q 015729 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV----P----SHINSSE 321 (401)
Q Consensus 250 ~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~ 321 (401)
..+.--+.++..++..... ....++..+..++|.+.|.+.|+++..+.++ .-+.+.. | +..++..
T Consensus 296 g~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~gg----H~v~vda~~~lph~~~~~~p~~a 368 (460)
T PRK13237 296 GMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVEPVGG----HAVFLDARRFLPHLPQDQFPAQA 368 (460)
T ss_pred ChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceecCCCc----eEEEEEhHHhCCCCCcccChHHH
Confidence 1111122233333332222 2456666678899999999999999875322 2333432 2 2357788
Q ss_pred HHHHHHhhCCeEE------ccCCCCCCC-------cEEEEeecc-cCCHHHHHHHHHHHHHHHHh
Q 015729 322 IVRRAWQRYNLSL------GLGLNKVAG-------KVFRIGHLG-HLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 322 l~~~L~~~~~i~v------~~g~~~~~~-------~~~Ri~~~~-~~~~~di~~~~~~i~~~l~~ 372 (401)
++..|....||.- ..|.++..+ ..+|+.+.- ..|.+.+|...+++.++.+.
T Consensus 369 l~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 369 LAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred HHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 9999887667763 122222211 348986544 66889999999999988754
No 328
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.82 E-value=3.8e-18 Score=150.98 Aligned_cols=306 Identities=17% Similarity=0.107 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
.....++++|+.+-|.-. .+.+.+|..|+..++.++.++||+|+....-|-+.+ +....+..|+++++|+.+
T Consensus 62 PT~~vlE~RiAaLEGG~a---a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~--- 135 (426)
T COG2873 62 PTTDVLEERIAALEGGVA---ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD--- 135 (426)
T ss_pred chHHHHHHHHHHhhcchh---hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC---
Confidence 456689999999887765 577889999999999999999999998876444433 455668899999999866
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
|++.+++++++ ++|+|++....||.+.+.|++.|.++||+ +|+++|+|.+-+.+. -+..-++|+||++.|.
T Consensus 136 --d~~~~~~aI~~----nTkavf~EtigNP~~~v~Die~ia~iAh~--~gvpliVDNT~atpy-l~rP~~hGADIVvHS~ 206 (426)
T COG2873 136 --DPENFEAAIDE----NTKAVFAETIGNPGLDVLDIEAIAEIAHR--HGVPLIVDNTFATPY-LCRPIEHGADIVVHSA 206 (426)
T ss_pred --CHHHHHHHhCc----ccceEEEEeccCCCccccCHHHHHHHHHH--cCCcEEEecCCCcce-ecchhhcCCCEEEEee
Confidence 79999999996 55999999999999999999999999999 999999998866442 2344567899999999
Q ss_pred CCcccCC-CcceEEEecHHHHHHh-----ccCCCC-cccc--chHH------HH-H-HhhcCCCCCCCCcHHHHHHHHHH
Q 015729 200 QKALSLP-TGMGIVCASPKALEAS-----KTAKSV-RVFF--DWKD------YI-K-FYNLGTFWPYTPSIQLLYGLRAA 262 (401)
Q Consensus 200 ~K~l~g~-~g~G~l~~~~~~~~~~-----~~~~~~-~~~~--~~~~------~~-~-~~~~g~~~~~~~~~~~~~a~~~a 262 (401)
+||++|- ..+|-+++.....+.. +....+ ..|. .+.+ +. + +..-.+.+..+.++.+..-+...
T Consensus 207 TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqG 286 (426)
T COG2873 207 TKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQG 286 (426)
T ss_pred cccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhc
Confidence 9999653 2344444433222222 111110 1111 1111 00 0 00001111224555433322222
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CC---ccc--cC---------CCccCCceeEEEEcCCCCC-HHHHHHHH
Q 015729 263 LDLIFEEGLENVIERHRRLGKATRLAVEAW-GL---KNC--TQ---------KEEWFSDTVTAVIVPSHIN-SSEIVRRA 326 (401)
Q Consensus 263 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~---~~~--~~---------~~~~~~~~~~~~~~~~~~~-~~~l~~~L 326 (401)
++ -+.-+++|.++|+..+.+.|++- .+ ... .. .-....+.++.|.+.++.+ ...+.+.|
T Consensus 287 lE-----TL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l 361 (426)
T COG2873 287 LE-----TLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDAL 361 (426)
T ss_pred hh-----hhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHH
Confidence 22 14567888999999999999873 22 111 11 0012345688888855522 22343333
Q ss_pred H------h---hCCeEEccCCC-------------CCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 327 W------Q---RYNLSLGLGLN-------------KVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 327 ~------~---~~~i~v~~g~~-------------~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
. + -.-+.+.|-+. ...++.+|+|+. -||++.++.-|+..++
T Consensus 362 ~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVG----IEd~~DiiaDl~qAl~ 424 (426)
T COG2873 362 KLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVG----IEDIDDIIADLEQALE 424 (426)
T ss_pred HHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHh
Confidence 2 1 11244444322 113456999864 4777777777776664
No 329
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=2e-17 Score=159.68 Aligned_cols=326 Identities=16% Similarity=0.097 Sum_probs=209.2
Q ss_pred CChHHHHHHHccCcCC--C--CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-------CC-CCe
Q 015729 19 HIPDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDR 86 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~--~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-------~~-gd~ 86 (401)
.-+|+|.+++.++... + ......+...++.++|++++.... +.+.|+++|++|++.++.... .+ ..+
T Consensus 72 h~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ 150 (460)
T PRK06916 72 HQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGL-KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQR 150 (460)
T ss_pred CCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcE
Confidence 4455566665554332 1 111123445678888888775322 359999999999999884311 12 367
Q ss_pred EEEEcCCcchHHHHHHHHHcC------------CcEEEEeCCCCCC------------CChHHHHHHHhccCCCCceEEE
Q 015729 87 IISFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEG------------AKLDVLASKLAADTAHTIKAIC 142 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~------------~d~~~le~~~~~~~~~~~~~i~ 142 (401)
|+....+||+.....+.- .+ .....++.+...+ -+++++++.++... +++.+|+
T Consensus 151 ii~~~~~YHG~t~~als~-s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~iAAvi 228 (460)
T PRK06916 151 FVTLKNAYHGDTIGAVSV-GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKH-EEIAAII 228 (460)
T ss_pred EEEECCcCCcccHHhHhc-cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCC-CcEEEEE
Confidence 899999998866322211 11 0123333221100 13566777776433 5789999
Q ss_pred EEe-cCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceE
Q 015729 143 IVH-NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGI 211 (401)
Q Consensus 143 ~~~-~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~ 211 (401)
+.. +....|.+.+ ++++.++|++ +|+++|+||++..... . ++.....+|+++++ |.++++ .++|.
T Consensus 229 ~EP~iqg~gG~~~~~~~fl~~lr~lc~~--~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~a 304 (460)
T PRK06916 229 VEPLVQGAGGMITMPKGYLKGLRNLCTK--YNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAG--KGLTGGYLPIAI 304 (460)
T ss_pred EeccccCCCCcccCCHHHHHHHHHHHHH--cCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeee--hhhhcCccccce
Confidence 998 5777787764 7889999999 9999999999763211 1 11223347888775 999777 37899
Q ss_pred EEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 015729 212 VCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA 291 (401)
Q Consensus 212 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (401)
+.+++++.+.+....... ..+..+. +++.++..+++..++++.+.+++ ..++..++.+++++.|++
T Consensus 305 v~~~~ei~~~~~~~~~~~---------~~~~~~~--T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~l~~ 370 (460)
T PRK06916 305 TVTTDEIYNAFYGDYEEQ---------KTFFHGH--SYTGNPLGCAVALANLELYEKTN---LIEQVARKTEYVATQLED 370 (460)
T ss_pred eeecHHHHHHhhcccccc---------CccccCC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHH
Confidence 999999877664211000 0011121 33456777888899999887754 667888888999999988
Q ss_pred c-CCccccCCCccCCceeEEEEcCCCC--------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHH
Q 015729 292 W-GLKNCTQKEEWFSDTVTAVIVPSHI--------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 359 (401)
Q Consensus 292 ~-g~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di 359 (401)
+ ...... +....+.++.+++.+.. + ...+.+.++++ ||.+.+. ++.+|+.+...+|++|+
T Consensus 371 l~~~~~v~--~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-----g~~l~~~Ppl~it~~~i 442 (460)
T PRK06916 371 LFALKHVG--DIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSREL-GMLTRPL-----GNTIVFMPPLASTIDEL 442 (460)
T ss_pred hhcCCCeE--EeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHC-CeEEEec-----CCEEEEeCCcccCHHHH
Confidence 6 332222 12234556666662210 0 23677777766 9988642 46899987888999999
Q ss_pred HHHHHHHHHHHHhc
Q 015729 360 LGCLAGVEMILKDV 373 (401)
Q Consensus 360 ~~~~~~i~~~l~~~ 373 (401)
|+++++++++++++
T Consensus 443 d~~~~~l~~~l~~~ 456 (460)
T PRK06916 443 DEMLRILYKAISDV 456 (460)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999764
No 330
>PRK07481 hypothetical protein; Provisional
Probab=99.82 E-value=2.2e-17 Score=159.11 Aligned_cols=308 Identities=15% Similarity=0.124 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C-----CC-CCeEEEEcCCcchHHHHHHHHH--------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L-----SP-GDRIISFLIGQFSLLWIDQQQR-------- 105 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~-----~~-gd~vl~~~~~~~~~~~~~~~~~-------- 105 (401)
+...++.++|.++++...-+.+.|+++|++|++.++... . ++ ..+|+....+||+.....+.-.
T Consensus 86 ~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~ 165 (449)
T PRK07481 86 PRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRN 165 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccc
Confidence 455678888888774322345999999999999988431 1 12 3578999988888653222110
Q ss_pred cC---CcEEEEeCCCCC--C---CChHH--------HHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhh
Q 015729 106 LN---FNVDVVESDWGE--G---AKLDV--------LASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (401)
Q Consensus 106 ~g---~~~~~v~~~~~~--~---~d~~~--------le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~ 165 (401)
.+ ..+..++.+... . -|++. +|+.+.....+++.+|++...+...|.+.+ ++++.++|++
T Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~ 245 (449)
T PRK07481 166 YEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDR 245 (449)
T ss_pred cCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHH
Confidence 00 112223222110 0 13333 344443222257899999998888888765 7889999999
Q ss_pred cCCCcEEEEecccccCcc---e--eccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 166 YRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~~~---~--~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
+|+++|.||++..... . +......+|+++++ |.++++ .++|.+++++++.+.+....... .
T Consensus 246 --~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~---------~ 312 (449)
T PRK07481 246 --HGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVPLGATMVNARIADAFEANADFG---------G 312 (449)
T ss_pred --cCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcCceEEEEcHHHHHHHhccCccc---------c
Confidence 9999999999763321 1 12223347888886 999776 36899999999887765321000 0
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC-
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
.+..+. +++.++..+++..++++.+.++ +..++..+..+++.+.|+++ ...+... ....+.++.+++...
T Consensus 313 ~~~h~~--T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vrG~Glm~gi~l~~~~ 385 (449)
T PRK07481 313 AIMHGY--TYSGHPVACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGD--VRGKGLMLALDLVADK 385 (449)
T ss_pred ccccCC--CCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEE--EeecceEEEEEecccc
Confidence 011121 3345667778888899988765 46777888888888888875 3443321 123456677776211
Q ss_pred -----CC-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 317 -----IN-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 317 -----~~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
.+ ...+...|.++ ||.+.+. +..+|+++...+|++|+|+++++++++++++..
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~-----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 448 (449)
T PRK07481 386 ATREPIDPSKGYANAVADVAREN-GVLVRPS-----GTKIILSPPLVIQREDVDRIVDALDAGLSAVPF 448 (449)
T ss_pred cccCCCCchhHHHHHHHHHHHhC-CeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 01 23566677766 9988643 346899887788999999999999999987643
No 331
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.82 E-value=8.8e-18 Score=155.97 Aligned_cols=339 Identities=17% Similarity=0.137 Sum_probs=228.9
Q ss_pred CCCcccccCC------CcCChHHHHHHHccCcCC--CC--CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 7 PGKNHLFVPG------PVHIPDQVIRAMNRNNED--YR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 7 ~~~~~~~~~~------p~~~~~~v~~a~~~~~~~--~~--~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
-|+-|+++-+ -..-.+++.+|+.++... |. .........+|.++|+++....+=+.+.|++||++|++.+
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtA 121 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETA 121 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHH
Confidence 3455555443 244557777777775432 11 1111122668999999998743234599999999999998
Q ss_pred HhccC-------CCC-CeEEEEcCCcchHHHHHHHH------H---cC---CcEEEEeCCCC--------CC----CChH
Q 015729 77 LTNTL-------SPG-DRIISFLIGQFSLLWIDQQQ------R---LN---FNVDVVESDWG--------EG----AKLD 124 (401)
Q Consensus 77 ~~~~~-------~~g-d~vl~~~~~~~~~~~~~~~~------~---~g---~~~~~v~~~~~--------~~----~d~~ 124 (401)
+.-.+ +|. .+++....+||+..+..+.- + .+ ..+..++.+.. +. -..+
T Consensus 122 lKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~ 201 (449)
T COG0161 122 LKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAAD 201 (449)
T ss_pred HHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHH
Confidence 84321 343 34888888999876422111 0 11 12334443331 11 1256
Q ss_pred HHHHHHhccCCCCceEEEEEecCCC-cccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---eeccCc--ccceE
Q 015729 125 VLASKLAADTAHTIKAICIVHNETA-TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMDE--WGIDV 194 (401)
Q Consensus 125 ~le~~~~~~~~~~~~~i~~~~~~n~-tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~--~~~di 194 (401)
+||+++.+...+++.++++...... .|+++| ++++.++|++ ||+++|.||+-..+.. .|..+. ..+|+
T Consensus 202 ~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~k--y~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi 279 (449)
T COG0161 202 ELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDK--YGILLIADEVATGFGRTGKMFACEHAGIVPDI 279 (449)
T ss_pred HHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHH--cCcEEEeecceeCCCcCchhhhhhhcCCCCCe
Confidence 7888888765568999999988766 888875 7899999999 9999999998653321 222222 34788
Q ss_pred EEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHH
Q 015729 195 ALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLEN 273 (401)
Q Consensus 195 ~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 273 (401)
++.+ |.+.++ .++|.+++++++.+.+..... +.|.-|+ +++-++..+++..+.|+.+.+++
T Consensus 280 ~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~~~~~-----------~~f~HG~--TYsghPlacAaAla~L~i~e~e~--- 341 (449)
T COG0161 280 LCLA--KGLTGGYLPLSAVLTSDRIYEAFSDGDA-----------GAFMHGH--TYSGNPLACAAALANLDILEEED--- 341 (449)
T ss_pred eeec--ccccccchhhHhHhhhHHHHHHHhcccC-----------CeeccCC--ccccCHHHHHHHHHHHHHHHhcC---
Confidence 8877 888655 478999999999988875421 1122243 66777888899999999998875
Q ss_pred HHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCceeEEEEcCCCCC---------HHHHHHHHHhhCCeEEccCCCCCC
Q 015729 274 VIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVIVPSHIN---------SSEIVRRAWQRYNLSLGLGLNKVA 342 (401)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~L~~~~~i~v~~g~~~~~ 342 (401)
+.++.++...++.+.|++ + +.+.+.. ....+.+..+++-.... ...+.+.+.++ |+.++|.
T Consensus 342 l~~~~~~~~~~l~~~L~~~l~~~p~Vgd--VR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~-Gl~iRp~----- 413 (449)
T COG0161 342 LLERVAEIGAYLQAGLQAALADHPLVGD--VRGLGLIGAIELVADKATKTPFEARVGARVRAAALER-GLLIRPL----- 413 (449)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCcEEE--eeccceEEEEEEecccccccchhhhHHHHHHHHHHHC-CeEEeec-----
Confidence 677777888899999987 3 4444432 23456777778732222 34677777777 9999976
Q ss_pred CcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 343 GKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 343 ~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++.+-+++...+|++|+|++++++++++++.
T Consensus 414 g~~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 414 GDVIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred CCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 5588888877899999999999999999864
No 332
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=2.1e-17 Score=159.34 Aligned_cols=324 Identities=18% Similarity=0.109 Sum_probs=206.2
Q ss_pred CChHHHHHHHccCcC----CCCCccHHHHHHHHHHHHHHHhcCCCC--ceEEec-CChhHHHHHHHhc--cCCCCCeEEE
Q 015729 19 HIPDQVIRAMNRNNE----DYRSPAVPALTKTLLEDIKKIFKTTSG--TPFLIP-TTGTGAWESALTN--TLSPGDRIIS 89 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~~~~--~~i~~~-~g~t~a~~~~~~~--~~~~gd~vl~ 89 (401)
.-+|.|.++++++.. .+......+...++-+++.+.....-. ..+.++ ++|++|++.+++- ......+|+.
T Consensus 79 h~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~ 158 (464)
T PRK06938 79 HNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLS 158 (464)
T ss_pred CCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEE
Confidence 334566666665432 111111234444666777766542211 246565 7999999998843 2334468888
Q ss_pred EcCCcchHHHHHHHHHc--------C---CcEEEEeCCCCCC------------CChHHHHHHHhccC--CCCceEEEEE
Q 015729 90 FLIGQFSLLWIDQQQRL--------N---FNVDVVESDWGEG------------AKLDVLASKLAADT--AHTIKAICIV 144 (401)
Q Consensus 90 ~~~~~~~~~~~~~~~~~--------g---~~~~~v~~~~~~~------------~d~~~le~~~~~~~--~~~~~~i~~~ 144 (401)
...+||+.....+.... + -.+..++.+...+ .+.+.+++.+.+.. .+++.+|++.
T Consensus 159 ~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~E 238 (464)
T PRK06938 159 FQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILE 238 (464)
T ss_pred ECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEc
Confidence 88888887633222110 0 1233444432211 12567888886421 1358899999
Q ss_pred ecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEec
Q 015729 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCAS 215 (401)
Q Consensus 145 ~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~ 215 (401)
......|.+.+ ++++.++|++ +|+++|.||++..... .+ +.....+|+++++ |.++++.++|.++.+
T Consensus 239 Piqg~gG~~~p~~~yl~~lr~lc~~--~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~g--KglggG~PlsAv~~~ 314 (464)
T PRK06938 239 VVQGEGGVIPAPIEWLRGLRRITEE--AGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLS--KAIGGSLPLAVVVYR 314 (464)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEee--ccccCCCceEEEeeh
Confidence 88887888765 7889999999 9999999999763321 11 2223347998886 999877788999988
Q ss_pred HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--C
Q 015729 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--G 293 (401)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g 293 (401)
++. +.+... . .++ +++.++..+++..++++.+.++ +..++..++.+++.+.|+++ .
T Consensus 315 ~~~-~~~~~~-----~-----------~~~--T~~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~ 372 (464)
T PRK06938 315 EWL-DTWQPG-----A-----------HAG--TFRGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRD 372 (464)
T ss_pred hHh-hccCCC-----C-----------CCC--CCCcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHh
Confidence 774 433211 0 011 3446667788889999988765 46777888888888888875 3
Q ss_pred CccccCCCccCCceeEEEEcCCC--C---------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHH
Q 015729 294 LKNCTQKEEWFSDTVTAVIVPSH--I---------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 359 (401)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~--~---------~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di 359 (401)
.++... ....+.++.+++.+. . + ...+...|.++ |+.+.++.. .++.+|+.+...+|++|+
T Consensus 373 ~~~i~~--VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~g~--~~~~l~~~Ppl~it~~ei 447 (464)
T PRK06938 373 YPQLGD--VRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRR-GLILELGGR--HGSVVRFLPPLIITAEQI 447 (464)
T ss_pred CCCeee--eeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHC-CeEEeecCC--CCCEEEEECCCccCHHHH
Confidence 443321 224556777777321 0 1 23566777766 998865421 257899988888999999
Q ss_pred HHHHHHHHHHHHhc
Q 015729 360 LGCLAGVEMILKDV 373 (401)
Q Consensus 360 ~~~~~~i~~~l~~~ 373 (401)
|+++++++++++++
T Consensus 448 d~~~~~l~~~l~~~ 461 (464)
T PRK06938 448 DEVAEIFAEAVAAA 461 (464)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999764
No 333
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=3.7e-17 Score=157.66 Aligned_cols=318 Identities=15% Similarity=0.108 Sum_probs=205.2
Q ss_pred ChHHHHHHHccCcCC--CC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCc
Q 015729 20 IPDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQ 94 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~ 94 (401)
-+|+|.+++.++... +. .....+...++.++|+++++... +.+.|++||++|++.++.- ......+|+....+|
T Consensus 88 ~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~y 166 (459)
T PRK06082 88 GHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGEL-NRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSF 166 (459)
T ss_pred CCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCC-CEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCC
Confidence 445566555554321 11 11224556788888988875322 3599999999999998743 233447899998888
Q ss_pred chHHHHHHHHHcCC------------cEEEEeCCCCCC--C---------ChHHHHHHHhccCCCCceEEEEEecCCCcc
Q 015729 95 FSLLWIDQQQRLNF------------NVDVVESDWGEG--A---------KLDVLASKLAADTAHTIKAICIVHNETATG 151 (401)
Q Consensus 95 ~~~~~~~~~~~~g~------------~~~~v~~~~~~~--~---------d~~~le~~~~~~~~~~~~~i~~~~~~n~tG 151 (401)
|+.....+.- .+. .+..++.....+ . +++.+++.+++. +++.+|++..+.+..+
T Consensus 167 HG~t~~a~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~vAavIvEPv~g~g~ 243 (459)
T PRK06082 167 HGASLDAISV-GGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE--GGIGAFIAEAVRNTDV 243 (459)
T ss_pred cCccHHHHhh-cCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC--CCEEEEEECCccCCCC
Confidence 8876322211 111 123333211100 1 135577777642 3678888888876533
Q ss_pred cccc---hHHHHHHhhhcCCCcEEEEecccccCcce---e--ccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHh
Q 015729 152 VTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID---F--RMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEAS 222 (401)
Q Consensus 152 ~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~---~--~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~ 222 (401)
.+.| ++++.++|++ +|+++|+||++...... + +.....+|+++++ |.++++. ++|.+++++++....
T Consensus 244 ~~~~~~yl~~lr~lc~~--~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~g--Kgl~gG~~P~~av~~~~~i~~~~ 319 (459)
T PRK06082 244 QVPSKAYWKRVREICDK--HNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIG--KGLGGGLVPIAAMITKDKYNTAA 319 (459)
T ss_pred cCCCHHHHHHHHHHHHH--cCCEEEEechhhCCCccchhhHhHhhCCCCCEEEec--ccccCCCCcceEEEEcHHHHhhc
Confidence 3445 7899999999 99999999998743211 1 1122347888864 9997763 689999988865432
Q ss_pred ccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCC
Q 015729 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQK 300 (401)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~ 300 (401)
... + .+ ++++.++..+++..++++.+.+++ ..++..++.+++++.|+++ .+.+...
T Consensus 320 ~~~---------------~--~~-~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~- 377 (459)
T PRK06082 320 QIS---------------L--GH-YTHEKSPLGCAAALATIEVIEQEG---LLEKVKADSQFMRERLLEMKAKYPLIGD- 377 (459)
T ss_pred cCC---------------C--CC-CCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhhCCCeee-
Confidence 110 0 11 234466777888889999887653 7788888999999999875 3443321
Q ss_pred CccCCceeEEEEcCCCC-----C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 301 EEWFSDTVTAVIVPSHI-----N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 301 ~~~~~~~~~~~~~~~~~-----~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
....+.++.+++.+.. + ...+...+.++ ||.+.+. .++.+|+++...+|++|+|++++++++++.+
T Consensus 378 -vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~----~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 378 -VRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNN-GLSFKVS----QGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred -eeeccceeEEEEccCccccCccHHHHHHHHHHHHhC-CCEEEec----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 2235567777773211 1 33566667766 9887642 2578999888889999999999999999987
Q ss_pred c
Q 015729 373 V 373 (401)
Q Consensus 373 ~ 373 (401)
+
T Consensus 452 ~ 452 (459)
T PRK06082 452 I 452 (459)
T ss_pred H
Confidence 5
No 334
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.82 E-value=1.2e-17 Score=160.39 Aligned_cols=318 Identities=15% Similarity=0.089 Sum_probs=200.5
Q ss_pred cCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CCCCCeEEEEc
Q 015729 14 VPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFL 91 (401)
Q Consensus 14 ~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~~gd~vl~~~ 91 (401)
+.++..+.+++.+.+.+.. +. ....+...++.+++.+.+.. ...+.++++|++|++.++... ...+++|+..+
T Consensus 65 Gh~~p~i~~a~~~~~~~~~--~~-~~~~~~~~~la~~L~~~~~~--~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~ 139 (426)
T PRK00062 65 GHAHPEVVEAVIEAAEKGL--SF-GAPTELEVELAELVIELVPS--IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFE 139 (426)
T ss_pred CCCCHHHHHHHHHHHHhCC--cC-CCCCHHHHHHHHHHHHhCCC--CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence 3344444444445554421 11 12334556888888887632 235899999999999988653 33467899999
Q ss_pred CCcchHHHHHHHH-H-----cC-----CcEE-----EEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 92 IGQFSLLWIDQQQ-R-----LN-----FNVD-----VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 92 ~~~~~~~~~~~~~-~-----~g-----~~~~-----~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
++||+........ . .+ ...+ .+..+. -|++++++.+.+.. +++++|++....+.+|.+.+
T Consensus 140 ~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~i~~~~-~~~aaiivEpv~~~~G~~~~ 215 (426)
T PRK00062 140 GCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPY---NDLEAVEELFEEYG-DEIAAVIVEPVAGNMGVVPP 215 (426)
T ss_pred CccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCC---CCHHHHHHHHHhCC-CcEEEEEEeCCcCCCCCcCC
Confidence 9999875211111 0 01 0000 111111 27899999886533 47889999988888999987
Q ss_pred ----hHHHHHHhhhcCCCcEEEEecccccCcc--ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCC
Q 015729 156 ----LSKVRKLLDEYRHPALFLVDGVSSICAI--DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 156 ----l~~i~~l~~~~~~~~~li~D~a~~~~~~--~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~ 227 (401)
+++|.++|++ ||+++|+|++|..... .+ +.....+|++ +.+|.++++.++|++++++++.+.+.....
T Consensus 216 ~~~~l~~l~~l~~~--~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~ 291 (426)
T PRK00062 216 KPGFLEGLRELCDE--HGALLIFDEVMTGFRVALGGAQGYYGVTPDLT--TLGKIIGGGLPVGAFGGRREIMEQLAPLGP 291 (426)
T ss_pred CHHHHHHHHHHHHH--cCCEEEEeechhccccCCccHHHHhCCCcchH--hhhhHhhCCCcceeeeEHHHHHHhhccCCC
Confidence 8999999999 9999999999873211 11 1111235654 445999766557899999988887743210
Q ss_pred CccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCcc
Q 015729 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEW 303 (401)
Q Consensus 228 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~ 303 (401)
.+ .+..++.++..++++.++++.+.++ +..++..++.+++++.|+++ ++.....
T Consensus 292 --~~-------------~~~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vr---- 349 (426)
T PRK00062 292 --VY-------------QAGTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAGIPLTVN---- 349 (426)
T ss_pred --ce-------------ecccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcCCceEEE----
Confidence 00 0112346666678888888887664 36666777777777777653 4332111
Q ss_pred CCceeEEEEcCCC-C---------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 304 FSDTVTAVIVPSH-I---------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 304 ~~~~~~~~~~~~~-~---------~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
..+.++.+.+.+. . + +..+.+.|.++ ||.+.+... +.+++. ..+|++|++++++++++++
T Consensus 350 g~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~~----~~~~~~--~~~t~~ei~~~~~~l~~~l 422 (426)
T PRK00062 350 RVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQF----EAGFVS--AAHTDEDIEKTLEAARKAF 422 (426)
T ss_pred EecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCCc----Cceeee--ccCCHHHHHHHHHHHHHHH
Confidence 2344566665321 1 1 24688888766 999876421 345664 4689999999999999998
Q ss_pred Hhc
Q 015729 371 KDV 373 (401)
Q Consensus 371 ~~~ 373 (401)
+++
T Consensus 423 ~~~ 425 (426)
T PRK00062 423 AAL 425 (426)
T ss_pred Hhh
Confidence 764
No 335
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.81 E-value=2.1e-17 Score=157.88 Aligned_cols=293 Identities=11% Similarity=0.048 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHH---HHHHHHHcCC---cE-E-
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLL---WIDQQQRLNF---NV-D- 111 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~---~~~~~~~~g~---~~-~- 111 (401)
+...++-++|.+.++... +.+.|+++|++|++.++.. ......+|+....+||+.. +..+.. .+- .. .
T Consensus 93 ~~~~~la~~L~~~~~~~~-~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~-~~~~~~~~~~~ 170 (433)
T PRK00615 93 EQEILFAEELFSYLGLED-HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISF-SETSLDTLTHL 170 (433)
T ss_pred HHHHHHHHHHHHhCCCCc-CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCccccc-CCCCcCcCCCC
Confidence 445677788887775432 3599999999999998843 2333467888888888854 211111 010 00 0
Q ss_pred ---------EEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEeccc
Q 015729 112 ---------VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 112 ---------~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
.+.... -|++++++.+.+.. +++.+|++....+..|...| +++|.++|++ +|+++|+|++|
T Consensus 171 ~~~~~~~~~~~~~~~---~d~~~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~--~g~llI~DEv~ 244 (433)
T PRK00615 171 VDTDLAHPLTLSLPY---NDFQIFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRR--TGSLSIMDEVV 244 (433)
T ss_pred CCCCCCCCCeEeCCC---CCHHHHHHHHHhcC-CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHH--cCCEEEEEccc
Confidence 010111 16889999887544 46789999988888898887 4589999999 99999999998
Q ss_pred ccC-c-cee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHH
Q 015729 179 SIC-A-IDF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (401)
Q Consensus 179 ~~~-~-~~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 254 (401)
... . ..+ ......+|++++ .|.++++.++|.+++++++.+.+.... ..+. + .+++.++.
T Consensus 245 tG~R~G~~ga~~~~gv~PDi~~~--gK~lggG~p~~av~~~~~i~~~~~~~~--~~~~-----------~--~T~~g~p~ 307 (433)
T PRK00615 245 TGFRVAQGGAAAIYHVKPDITVY--GKILGGGLPAAAVVAHKSIMDHLAPEG--TIFQ-----------A--GTLSGNPL 307 (433)
T ss_pred ccccccHhHHHHhcCCCCCeEEE--cccccCCcceeeeeecHHHHhhhcCCC--Cccc-----------C--CCCcccHH
Confidence 522 1 011 111234788775 599976666799999999887764310 0000 1 13345677
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEcCCCC----------C--
Q 015729 255 LLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVPSHI----------N-- 318 (401)
Q Consensus 255 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~----------~-- 318 (401)
.+++..++++.+.+++ ..++..++.+++++.|+++ |+++... +.+.++.+.+.+.. +
T Consensus 308 ~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~----r~G~~~~i~~~~~~~~~~~~~~~~~~~ 380 (433)
T PRK00615 308 AMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLV----RYGSMFSFFFNENRPNNLAEAQLSDIE 380 (433)
T ss_pred HHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEE----eeceEEEEEEeCCCCCChHHHhhCCHH
Confidence 7888999999887653 5666777777776666653 5553221 24556667763211 0
Q ss_pred -HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 319 -SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 319 -~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...+.+.|.++ ||.+.+...+. . .+...+|++|||+++++++++++++
T Consensus 381 ~~~~~~~~l~~~-Gv~~~~~~~~~--~----~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 381 AFQTFYQSAFSK-GVYLSPSPFEA--S----FLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHHC-CeeecCccccc--c----ceecCCCHHHHHHHHHHHHHHHHHH
Confidence 12577777766 99987654321 1 2344579999999999999999764
No 336
>PRK07036 hypothetical protein; Provisional
Probab=99.81 E-value=4.7e-17 Score=157.24 Aligned_cols=304 Identities=16% Similarity=0.129 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C----C-C-CCeEEEEcCCcchHHHHHHHHHcC------
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L----S-P-GDRIISFLIGQFSLLWIDQQQRLN------ 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~----~-~-gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (401)
+...++.++|.+...... ..+.|++||++|++.++... . . + ..+|+....+||+..+..+.- .+
T Consensus 95 ~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~-~~~~~~~~ 172 (466)
T PRK07036 95 APAAELAAKLAELAPGDL-NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASL-TGKAADRT 172 (466)
T ss_pred HHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcc-cCCCcccc
Confidence 445677788877764322 35999999999999988431 1 1 2 357888888888866332211 11
Q ss_pred ------CcEEEEeCCCC----CCC--------ChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhh
Q 015729 108 ------FNVDVVESDWG----EGA--------KLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (401)
Q Consensus 108 ------~~~~~v~~~~~----~~~--------d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~ 165 (401)
..+..++.+.. ... ..+.+++.+.....+++.+|++.......|...+ ++++.++|++
T Consensus 173 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~ 252 (466)
T PRK07036 173 EFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRR 252 (466)
T ss_pred cccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHH
Confidence 11233332211 011 1244566665432257899999998888898876 8899999999
Q ss_pred cCCCcEEEEecccccC-cc--eeccC---cccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHH
Q 015729 166 YRHPALFLVDGVSSIC-AI--DFRMD---EWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (401)
Q Consensus 166 ~~~~~~li~D~a~~~~-~~--~~~~~---~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
+|+++|+||++... -. .+..+ ...+|+++++ |.++++ .++|.+++++++.+.+........
T Consensus 253 --~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~-------- 320 (466)
T PRK07036 253 --YDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFA--KGLTSGYQPLGAVIISERLLDVISGPNAKGN-------- 320 (466)
T ss_pred --cCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEc--cccccCccccEEEEEcHHHHHHHhcccCcCc--------
Confidence 99999999998533 21 12222 2347888876 999776 368999999999887653211000
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC-
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
.+..++ +++.++..+++..++++.+.+++ ..++..+..++|++.|+++ ...... .....+.++.+++.+.
T Consensus 321 -~~~~~~--T~~gnpl~~aaa~a~Le~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~--~vrG~Gl~~~ve~~~~~ 392 (466)
T PRK07036 321 -VFTHGF--TYSGHPVACAAALKNIEIMEREG---LCEHVREVGPYFEERLASLRELPLVG--DVRGDHLMACVECVADK 392 (466)
T ss_pred -ccccCC--CCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhccCCCEE--EEEeeceEEEEEEccCc
Confidence 011122 33456677888899999887654 7777888888888888775 333222 1224556777777321
Q ss_pred C-------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 I-------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~-------~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. + ...+...|+++ ||.+.+. ++.+|+++...+|++|+|+++++++++++++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~-----~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 393 GSKALLPEDIAIGQRIDRHCQER-GLLVRPL-----EHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred cccCCCCchhHHHHHHHHHHHHC-CcEEeec-----CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 0 1 23566777766 9888642 3578998777889999999999999988764
No 337
>PRK12403 putative aminotransferase; Provisional
Probab=99.81 E-value=7.1e-17 Score=155.89 Aligned_cols=323 Identities=13% Similarity=0.051 Sum_probs=201.5
Q ss_pred ChHHHHHHHccCcCC--CC--C-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC-------CCCC-e
Q 015729 20 IPDQVIRAMNRNNED--YR--S-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SPGD-R 86 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~--~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~-------~~gd-~ 86 (401)
-+|++.+++.++... +. . ....+...++.++|+++++... +.++++++|++|++.++.... ++++ .
T Consensus 71 ~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ 149 (460)
T PRK12403 71 GRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY-SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKI 149 (460)
T ss_pred CCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcE
Confidence 345666666554322 11 1 1123556688888888876432 358999999999999885431 2333 3
Q ss_pred EEEEcCCcchHHHHHHHHHcCC-----------cEEEEeCCCC----CCC--------ChHHHHHHHhccCCCCceEEEE
Q 015729 87 IISFLIGQFSLLWIDQQQRLNF-----------NVDVVESDWG----EGA--------KLDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~----~~~--------d~~~le~~~~~~~~~~~~~i~~ 143 (401)
|+....+||+.....+. ..+. .+..++.+.. +.. +.+.+++.+.+...+++.+|++
T Consensus 150 ii~~~~~yHG~t~~~~s-~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~ 228 (460)
T PRK12403 150 MIGRWNGYHGSTLAATA-LGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVA 228 (460)
T ss_pred EEEECCCcCcccHhhhh-cCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 45556677776532221 1121 1233332211 001 1355666664322246889999
Q ss_pred EecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCC-cceEEE
Q 015729 144 VHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPT-GMGIVC 213 (401)
Q Consensus 144 ~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~-g~G~l~ 213 (401)
....+..|.+.+ ++++.++|++ +|+++|+||++..... .+ +.....+|+++++ |.++++. ++|.++
T Consensus 229 Epv~g~gG~~~~~~~yl~~lr~lc~~--~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~g--K~lggG~~Piga~v 304 (460)
T PRK12403 229 EPFQGAGGMIFPPESYWPEIQRICRQ--YDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIA--KGLTSGYVPMGGLV 304 (460)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEc--ccccccccceEEEE
Confidence 988888898887 8999999999 9999999999863311 11 2122347888765 9998774 688888
Q ss_pred ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHH-HHHHHHHHHHHHc
Q 015729 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHR-RLGKATRLAVEAW 292 (401)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~-~~~~~l~~~L~~~ 292 (401)
+++++.+.+.... .. +..++ +++.++..+++..++|+.+.+++ ..++.. ++.+++++.|+++
T Consensus 305 ~~~~i~~~~~~~~-~~-----------~~~~~--T~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l 367 (460)
T PRK12403 305 LSKRIAEALVEQG-GV-----------FAHGL--TYSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREV 367 (460)
T ss_pred ECHHHHHHHhcCC-Cc-----------cccCC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHH
Confidence 9988877664211 00 00111 33466778889999999887754 566665 7788888888764
Q ss_pred --CCccccCCCccCCceeEEEEcCCC-C-----C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHH
Q 015729 293 --GLKNCTQKEEWFSDTVTAVIVPSH-I-----N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQL 359 (401)
Q Consensus 293 --g~~~~~~~~~~~~~~~~~~~~~~~-~-----~-----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di 359 (401)
...+... ....+.++.+++.+. . . ...+...+.++ |+.+.+. ++.+|+++.-.+|++|+
T Consensus 368 ~~~~~~i~~--vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----~~~~~l~Ppl~it~~ei 439 (460)
T PRK12403 368 FGDHPLVGE--VQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE-GVIIRST-----LGRMIMAPALVAGRAEI 439 (460)
T ss_pred HhcCCCEEe--EeecceEEEEEEccCccccccccchhHHHHHHHHHHHhC-CEEEEec-----CCEEEEECCCCCCHHHH
Confidence 3443322 223556777776321 0 1 11233445555 9888632 34689988878899999
Q ss_pred HHHHHHHHHHHHhc
Q 015729 360 LGCLAGVEMILKDV 373 (401)
Q Consensus 360 ~~~~~~i~~~l~~~ 373 (401)
|+++++++++++++
T Consensus 440 d~~~~~l~~al~~~ 453 (460)
T PRK12403 440 DELVDKTRIAVDRT 453 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998765
No 338
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.81 E-value=2e-17 Score=154.46 Aligned_cols=275 Identities=12% Similarity=0.098 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHH------cCC----
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQR------LNF---- 108 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~------~g~---- 108 (401)
.+...++.++++++.+.+ .++++++||+|++.++.. .....++|+....+||+.....+... .+.
T Consensus 65 ~~~~~~la~~l~~~~~~~---~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~ 141 (364)
T PRK04013 65 HEEKEEMLEELSKWVNYE---YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLV 141 (364)
T ss_pred CHHHHHHHHHHHhhcCCC---EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCC
Confidence 355678888888887543 489999999999998854 23333889999998888753322210 111
Q ss_pred -cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc-c---hHHHHHHhhhcCCCcEEEEecccccCcc
Q 015729 109 -NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-N---LSKVRKLLDEYRHPALFLVDGVSSICAI 183 (401)
Q Consensus 109 -~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~~~li~D~a~~~~~~ 183 (401)
.+..++.+ |++.+++.+. +++++|++.+.+...|... | ++++.++|++ +|+++|.|++++..-.
T Consensus 142 ~~~~~~~~~-----d~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~--~gillI~DEv~tG~Rt 210 (364)
T PRK04013 142 PGFKHIPFN-----DVEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTED--VGALLIADEVQSGLRT 210 (364)
T ss_pred CCcEEecCC-----CHHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEechhhcCCC
Confidence 12222221 6888888886 3679999998888777766 4 8899999999 9999999999873210
Q ss_pred --eec--cCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHH
Q 015729 184 --DFR--MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGL 259 (401)
Q Consensus 184 --~~~--~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 259 (401)
.+. .....+|+++++ |.++++.++|.++.+++. ... .+..++..++..+++.
T Consensus 211 G~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~~~----~~~------------------~~~~T~~gnp~~~aaa 266 (364)
T PRK04013 211 GKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNFDV----ERG------------------KHGSTFGGNPLACKAV 266 (364)
T ss_pred CchhHHHhcCCCCCEEEec--ccccCCceeEEEEecccc----cCC------------------CcCCCCCcCHHHHHHH
Confidence 111 123447888885 999877677888877664 110 0112445677788889
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC
Q 015729 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN 339 (401)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~ 339 (401)
.++++.+.++++... ..+. |+++.-+... +....+.++.+++.+ +...+.+.++++ |+.+.+.
T Consensus 267 ~a~l~~i~~~~l~~~---~~~~-------l~~l~~~~v~--~vRG~Gl~~gve~~~--~~~~i~~~~~~~-Gll~~~~-- 329 (364)
T PRK04013 267 AVTLRILRRERLVEK---AGEK-------FIEIKGERVV--TTRGRGLMIGIVLKK--PVGKYVEELQNR-GYLVHTA-- 329 (364)
T ss_pred HHHHHHHHhccHHHH---HHHH-------HHHhccCcce--eeeeCcEEEEEEeCC--cHHHHHHHHHhC-CcEEeeC--
Confidence 999999988763222 2221 2222112221 122456778888832 356788888876 8887542
Q ss_pred CCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 340 KVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 340 ~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.++.+||.+...+|++|++++++++++++++
T Consensus 330 --g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 330 --GQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred --CCCEEEEeCCcccCHHHHHHHHHHHHHHHHH
Confidence 2378999988899999999999999999875
No 339
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.81 E-value=3e-17 Score=161.93 Aligned_cols=309 Identities=11% Similarity=0.055 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-- 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-- 118 (401)
...+.+.++..|++||++.. .++++|+|.+|.+++.+.+++||+|++.-++|-|..- ......|++++++....+
T Consensus 173 eG~i~eAq~~AA~~fgAd~t--yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~h-gaLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKT--YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHH-GALIQAGATPVYLETARNPF 249 (720)
T ss_pred ChHHHHHHHHHHHHhCCCce--EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH-HHHHHcCCeEEEeecccccc
Confidence 45588999999999999874 6789999999999999999999999999999888652 235668999999876542
Q ss_pred ---CCCCh-----HHHHHHHhccCCC-----C-ceEEEEEecCCCcccccchHHHHHH-hhhcCCCcEEEEecccccCcc
Q 015729 119 ---EGAKL-----DVLASKLAADTAH-----T-IKAICIVHNETATGVTNNLSKVRKL-LDEYRHPALFLVDGVSSICAI 183 (401)
Q Consensus 119 ---~~~d~-----~~le~~~~~~~~~-----~-~~~i~~~~~~n~tG~~~~l~~i~~l-~~~~~~~~~li~D~a~~~~~~ 183 (401)
+.+++ +.+++++++++.+ + .++++++++ |.-|.++++++|+++ ++. ++ +|++|+||+....
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~--~~-~llvDEAhgah~~ 325 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHL--CD-YILFDSAWVGYEQ 325 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhcc--CC-cEEEeCcchhhhc
Confidence 23454 4599999876212 2 478888875 568999999999998 677 77 9999999874321
Q ss_pred --e----e--ccCcccce----EEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCC
Q 015729 184 --D----F--RMDEWGID----VALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (401)
Q Consensus 184 --~----~--~~~~~~~d----i~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 251 (401)
+ + ...+.|+| +++-|.||++.+....+++.++...++. +.-+.+.......+.. +.+.+|
T Consensus 326 F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g------~~~~v~~~r~~~al~m--~qSTSP 397 (720)
T PRK13578 326 FIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKG------QARYCPHKRLNNAFML--HASTSP 397 (720)
T ss_pred cCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCccccc------ccccCCHHHHHHHHHH--HcCCCh
Confidence 1 1 11245788 9999999999888887888876653210 0001222222222221 113467
Q ss_pred cHHHHHHHHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHH-HHc-CCccccCC---------------------------C
Q 015729 252 SIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAV-EAW-GLKNCTQK---------------------------E 301 (401)
Q Consensus 252 ~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L-~~~-g~~~~~~~---------------------------~ 301 (401)
+...++++..+...+.. .| +...++..+....+++.+ +.. +++++.++ .
T Consensus 398 sY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~ 476 (720)
T PRK13578 398 FYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGE 476 (720)
T ss_pred HHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCc
Confidence 77888888888777765 45 678888888888899888 444 66555211 0
Q ss_pred c------------cCCceeEEEEcCCCCC------------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHH
Q 015729 302 E------------WFSDTVTAVIVPSHIN------------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEL 357 (401)
Q Consensus 302 ~------------~~~~~~~~~~~~~~~~------------~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~ 357 (401)
. ...+.-+.+..| |++ +..+.+.|.++ ||.+..... ..+-+-+....+++
T Consensus 477 ~whgf~~~~~~~~~lDP~KltI~t~-G~~~~~G~~~~~Gipg~~l~~~L~e~-gI~~E~~d~----~~vL~l~s~g~t~~ 550 (720)
T PRK13578 477 KWHGFEGYAEDQYFVDPCKLLLTTP-GIDAETGEYEDFGIPATILANYLREN-GIVPEKCDL----NSILFLLTPAEDMA 550 (720)
T ss_pred cccccccccccccccCCceEEEEcC-CcCcccccccccCccHHHHHHHHHHc-CCEEEecCC----CeEEEEeCCCCCHH
Confidence 0 012333334332 333 68899999877 998764322 23333233346999
Q ss_pred HHHHHHHHHHHHHH
Q 015729 358 QLLGCLAGVEMILK 371 (401)
Q Consensus 358 di~~~~~~i~~~l~ 371 (401)
++++++++|.+.-+
T Consensus 551 ~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 551 KLQQLVAMLARFEK 564 (720)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987744
No 340
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.81 E-value=1.1e-17 Score=152.43 Aligned_cols=213 Identities=18% Similarity=0.137 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (401)
+....+++.++.+.|.+. ++..++|..|+..++..++++|++|++....|.+.. +......+|++...++.+
T Consensus 77 Pt~~~le~~iaal~ga~~---~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~--- 150 (409)
T KOG0053|consen 77 PTRDVLESGIAALEGAAH---ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD--- 150 (409)
T ss_pred CchHHHHHHHHHHhCCce---EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh---
Confidence 346689999999998877 677888999999999999999999999998877776 566777899999998876
Q ss_pred CCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecC
Q 015729 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 120 ~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
|++.+++++++ ++++|++..|.||+..+.|+++|.++|++ +|+++++|++-+.+ ...+.-..|+||++.|.
T Consensus 151 --~~~~~~~~i~~----~t~~V~~ESPsNPll~v~DI~~l~~la~~--~g~~vvVDnTf~~p-~~~~pL~lGADIV~hSa 221 (409)
T KOG0053|consen 151 --DLKKILKAIKE----NTKAVFLESPSNPLLKVPDIEKLARLAHK--YGFLVVVDNTFGSP-YNQDPLPLGADIVVHSA 221 (409)
T ss_pred --hHHHHHHhhcc----CceEEEEECCCCCccccccHHHHHHHHhh--CCCEEEEeCCcCcc-cccChhhcCCCEEEEee
Confidence 78899999884 57999999999999999999999999999 99999999996544 34566778999999999
Q ss_pred CCcccCCCcc--eEEEec-HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 200 QKALSLPTGM--GIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 200 ~K~l~g~~g~--G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
+|+++|..-+ |.++.+ +++..++.... ..-| +++++. .+...++-+.. +.-+++
T Consensus 222 TKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~--------------~~lg----~~~~p~---~~~ll~Rglkt--l~lRi~ 278 (409)
T KOG0053|consen 222 TKYIGGHSDVIGGSVVLNSEELASRLKFLQ--------------EDLG----WCEDPF---DLFLLSRGLKT--LHLRIN 278 (409)
T ss_pred eeeecCCcceeeeEEecCcHHHHHHHHHHH--------------HHhc----CCCCHH---HHHHHhcCcch--hhhhHH
Confidence 9999876543 888886 77766665321 1112 245552 22222332222 334556
Q ss_pred HHHHHHHHHHHHHHHc
Q 015729 277 RHRRLGKATRLAVEAW 292 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~ 292 (401)
+..+++..+.+.|++.
T Consensus 279 ~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 279 KHSENALKIALLLEAH 294 (409)
T ss_pred HHHHHHHHHHHHhhhC
Confidence 6667777777777763
No 341
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=4e-18 Score=153.97 Aligned_cols=328 Identities=16% Similarity=0.187 Sum_probs=226.1
Q ss_pred ccCCCcCChHHHHHHHccCcCCC----CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 13 FVPGPVHIPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
|.....+..+++.+++.++.... ..-...+.-.++++.+|+++|.+.. ++|..| -..+...+.+++.||.-|+
T Consensus 149 Fa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a--~vF~mG-f~TNs~~~p~l~~~gsLIi 225 (519)
T KOG1357|consen 149 FAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDA--IVFSMG-FATNSMNIPSLLGKGSLII 225 (519)
T ss_pred ccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcce--EEEecc-ccccccCcceeecCCccee
Confidence 44477888899999999966432 2233456677999999999999874 455443 5555555677899998887
Q ss_pred EEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhcc-----C-CCC--ce-EEEEEecCCCcccccchHHH
Q 015729 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD-----T-AHT--IK-AICIVHNETATGVTNNLSKV 159 (401)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~-----~-~~~--~~-~i~~~~~~n~tG~~~~l~~i 159 (401)
.....|-|.. .-++..|+.++....+ |.+.||+.+++. + .++ -| +++.....++-|.+.+++++
T Consensus 226 SDelNHaSi~--~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~v 298 (519)
T KOG1357|consen 226 SDELNHASLI--TGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEV 298 (519)
T ss_pred eccccchhee--ccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHH
Confidence 7777666654 3478889999999877 677888877651 1 011 13 34445666789999999999
Q ss_pred HHHhhhcCCCcEEEEecccccCcce---------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcc
Q 015729 160 RKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
++++|+ +..+++.|+||+.|++. +..+...+||+.++..|.+ |..| |++..++++.+.+........
T Consensus 299 valkkk--ykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~G-Gyiagsk~lid~lrt~s~~~~ 374 (519)
T KOG1357|consen 299 VALKKK--YKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAG-GYIAGSKELIDYLRTPSPSAL 374 (519)
T ss_pred HHhhcc--ccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-cccc-ceecCcHHHHhhhccCCCcee
Confidence 999999 99999999999988763 2334446899999999987 3554 899999999887765433222
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH-Hh---cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCc
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-EE---GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~-~~---g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (401)
| ..+.++..+.....++..+. +. ..++..++..++..+++..|.+.|+.+...++ ++
T Consensus 375 y----------------at~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~d---Sp 435 (519)
T KOG1357|consen 375 Y----------------ATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNND---SP 435 (519)
T ss_pred e----------------cccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCC---CC
Confidence 1 11233332333444555443 11 25788899999999999999999998887643 32
Q ss_pred eeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~---~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
++.+-+-.+.....+.+.|+++ +|.+....++ ......|++..+.+++|++|++++.+..+=++.+.
T Consensus 436 -Vvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~~~ 505 (519)
T KOG1357|consen 436 -VVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDEDGV 505 (519)
T ss_pred -cceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchhhcc
Confidence 2222221122345777788766 5554433332 23456899888899999999999999877544433
No 342
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.9e-17 Score=150.55 Aligned_cols=333 Identities=16% Similarity=0.086 Sum_probs=232.6
Q ss_pred ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---C-C-CC---CeEEEEcCCcchHHHHHHHHHcCCc
Q 015729 38 PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---L-S-PG---DRIISFLIGQFSLLWIDQQQRLNFN 109 (401)
Q Consensus 38 ~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---~-~-~g---d~vl~~~~~~~~~~~~~~~~~~g~~ 109 (401)
+.......++-++++.+++.+....-..|.|+|+++..+.... . + +| .+++++... ...|.+.++.++++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v--~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNV--HAAFEKAARYFEVE 193 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHH--HHHHHHHHhhEEEE
Confidence 3345667789999999999985544466889999966554321 1 1 12 234444332 22367889999999
Q ss_pred EEEEeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc-----
Q 015729 110 VDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI----- 183 (401)
Q Consensus 110 ~~~v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~----- 183 (401)
++.|++++ +.++|+..+.+.+++++ ..++.+.++.|+|.+.|+++|.++..+. +++.+++|++.+.+..
T Consensus 194 l~~V~~~~~~~~~D~~k~~~~i~eNt----i~lv~~~~~~p~G~~e~ve~l~~l~~e~-w~ipiHvDa~~GgFi~p~~~~ 268 (491)
T KOG1383|consen 194 LREVPLDEGDYRVDPGKVVRMIDENT----IMLVGSLPNFPTGEIEDVEKLADLLLEI-WDIPIHVDACLGGFINPAGYL 268 (491)
T ss_pred EEeeeccccceEecHHHHHHHhccce----EEEEEEcCCCCccchhhHHHHHHHHHHH-hCCceeecccCcccccccccc
Confidence 99999995 45899999999999755 8999999999999999999999987765 9999999999775544
Q ss_pred ---eeccCcccceEEEecCCCcccCCCcceEEEecHH-HHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHH
Q 015729 184 ---DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPK-ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGL 259 (401)
Q Consensus 184 ---~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 259 (401)
++|+...++..+..+.||+-..+.|+|++.-+.+ +.. .. +++ -.++...........++.+..+++++
T Consensus 269 ~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~----~q---~~~-~~~w~Gg~y~s~TlngSR~g~~va~~ 340 (491)
T KOG1383|consen 269 NEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLP----HQ---LFF-HTDWLGGIYASPTLNGSRPGSQVAAQ 340 (491)
T ss_pred CccccccCCCCceeEeeccceeeeeecCcEEEEEccccccc----ce---EEE-eccccCccccCcccccCCcccHHHHH
Confidence 4577777888999999998888999987765443 211 10 000 01111111112223345666778999
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEc--CCCCCHHHHHHHHHhhCCeEEcc
Q 015729 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV--PSHINSSEIVRRAWQRYNLSLGL 336 (401)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~L~~~~~i~v~~ 336 (401)
++++-.+..+|+.+..+++.++++.+++.+++. ++++.++. .++|.. ....+..+++..|.+. |..+..
T Consensus 341 wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp-------~vs~~~~~s~~~~i~elsd~l~~~-GW~lna 412 (491)
T KOG1383|consen 341 WAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP-------LVSFILFGSNDVNIFELSDLLRKK-GWILNA 412 (491)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC-------cEEEEEccCCccchhhhhHHHHhc-CcCccc
Confidence 999999999999999999999999999999997 88887641 233332 1346788999999865 765543
Q ss_pred CCCCCCCcEEEEeecccCC-HHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHccCCC
Q 015729 337 GLNKVAGKVFRIGHLGHLN-ELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNNIPM 396 (401)
Q Consensus 337 g~~~~~~~~~Ri~~~~~~~-~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (401)
--.| .+.+ +++.-.+. ++--|+++.-|++++.++.-.+....+..+|.+.++.-.|.
T Consensus 413 lq~P-~a~H--i~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~~~~~~~~a~yg~a~~~~~ 470 (491)
T KOG1383|consen 413 LQFP-AAIH--ICVTRVHAREDVADRFVADIRKVVEELKSLPESKTHGMAAIYGLAQKTPD 470 (491)
T ss_pred cCCC-CceE--EEEEeeeccHHHHHHHHHHHHHHHHHHHhCCCcccCcccchhhhhhcCCc
Confidence 3222 2333 32222223 34468999999999988766555555555888887555544
No 343
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=2.7e-17 Score=144.78 Aligned_cols=367 Identities=17% Similarity=0.170 Sum_probs=239.7
Q ss_pred cccCCCcCChHHHHHHHccCcCCC--------C---CccHHHH-HHHHHHHHHHHhcCCCCceE--EecCChhHHHHHHH
Q 015729 12 LFVPGPVHIPDQVIRAMNRNNEDY--------R---SPAVPAL-TKTLLEDIKKIFKTTSGTPF--LIPTTGTGAWESAL 77 (401)
Q Consensus 12 ~~~~~p~~~~~~v~~a~~~~~~~~--------~---~~~~~~~-~~~l~~~la~~~g~~~~~~i--~~~~g~t~a~~~~~ 77 (401)
-+++.--..+.+|+||+.....+. + +.++.+. ..-++++..+.|+.++..|- +-+-+|+-|+..+-
T Consensus 44 eLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavY 123 (477)
T KOG2467|consen 44 ELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVY 123 (477)
T ss_pred eEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHH
Confidence 344555567889999988744321 1 2223333 33467777889999865443 22557899999988
Q ss_pred hccCCCCCeEEEEcC---CcchHHHHHHHHHcCCcEEE-----EeCCC-CCCCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 78 TNTLSPGDRIISFLI---GQFSLLWIDQQQRLNFNVDV-----VESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~---~~~~~~~~~~~~~~g~~~~~-----v~~~~-~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
.++++|+++|+-.+. ||-++.+..-.+.-.+.-++ ..+++ .+-+|.|.||+.... -+||+|+.-. +
T Consensus 124 tall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~---frPk~iiaG~--S 198 (477)
T KOG2467|consen 124 TALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL---FRPKLIIAGT--S 198 (477)
T ss_pred hhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHh---cCCcEEEecc--c
Confidence 999999999987765 55555432211111111111 12233 356899999998765 4677776553 3
Q ss_pred CcccccchHHHHHHhhhcCCCcEEEEecccccC-----cceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhc
Q 015729 149 ATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC-----AIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK 223 (401)
Q Consensus 149 ~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~-----~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~ 223 (401)
.--...|.+++.++|++ .|.+++.|-||-.| ..+..++ .+||++.+.||++.||.| |+++.++.... ..
T Consensus 199 aY~R~~DYaR~R~Iad~--~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKsLRGPRg-~mIFyRkGvk~-~~ 272 (477)
T KOG2467|consen 199 AYSRLIDYARFRKIADK--VGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKSLRGPRG-AMIFYRKGVKS-IK 272 (477)
T ss_pred cchhhccHHHHHHHHHh--cCceeehhhhhHHHHHhcccCCCccc--ccceeeccccccccCCcc-eeEEEeccCCc-CC
Confidence 33466789999999999 99999999998544 3444555 689999999999998886 88888876422 22
Q ss_pred cCCCCccccchHHHHHH--hhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 015729 224 TAKSVRVFFDWKDYIKF--YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (401)
+........++.+..+. |. | .-+.|.-..++++.-||+.....+++...++..+|++.+.+.|.++|+++....
T Consensus 273 ~k~g~~i~ydlE~kINfaVFP-~--lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgG- 348 (477)
T KOG2467|consen 273 PKQGKEILYDLEDKINFAVFP-G--LQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGG- 348 (477)
T ss_pred CCCCCcceechhhhhhhhccc-c--ccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCC-
Confidence 22222334444443322 22 1 122366667788888888877777888999999999999999999999998743
Q ss_pred ccCCceeEEEEc-CCCCCHHHHHHHHHhhCCeEEcc----C-CCCCCCcEEEEeecccCC----HHHHHHHHHHHHHHHH
Q 015729 302 EWFSDTVTAVIV-PSHINSSEIVRRAWQRYNLSLGL----G-LNKVAGKVFRIGHLGHLN----ELQLLGCLAGVEMILK 371 (401)
Q Consensus 302 ~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~~i~v~~----g-~~~~~~~~~Ri~~~~~~~----~~di~~~~~~i~~~l~ 371 (401)
..+.++.+.+ |.|++...+-+.| +..+|.+.. | .....++.+|++..+-++ ++|+++..+-|.++.+
T Consensus 349 --TDnHlvLvDLr~~G~dGarvE~vl-e~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 349 --TDNHLVLVDLRPKGVDGARVEKVL-ELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred --ccceEEEEeccccCCchHHHHHHH-HHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 3445555665 4677776665555 444666432 2 223345679999876443 7899999998887754
Q ss_pred h-cCCCCCcc-hHHHHHHHHHHccCCC
Q 015729 372 D-VGYPVKLG-SGVAAASAYLQNNIPM 396 (401)
Q Consensus 372 ~-~~~~~~~~-~~~~~~~~~~~~~~~~ 396 (401)
- ..++..-+ .-+.++..++..+.++
T Consensus 426 i~~~~~~~~~~~~lkdf~~~~~~~~~~ 452 (477)
T KOG2467|consen 426 IALEIQKEAGGKKLKDFKKFLSENKVM 452 (477)
T ss_pred HHHHHHhhcccchHHHHHHHhccCchh
Confidence 1 22222223 4477777777666654
No 344
>PRK06149 hypothetical protein; Provisional
Probab=99.80 E-value=4.3e-17 Score=170.57 Aligned_cols=301 Identities=14% Similarity=0.060 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHc------CC-----
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRL------NF----- 108 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~------g~----- 108 (401)
+...++.+++++.+.... +.+.|+++|++|++.+++- ......+|+....+||+.......-.. +.
T Consensus 624 ~~~~elae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~ 702 (972)
T PRK06149 624 AAVAEFSERLAALAPDGL-DTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRP 702 (972)
T ss_pred HHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCC
Confidence 456688888888874322 3599999999999998852 233446788888888876532211100 00
Q ss_pred -cEEEEeCCCC--CCC---C-----hHHHHHHHhc--cCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcE
Q 015729 109 -NVDVVESDWG--EGA---K-----LDVLASKLAA--DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPAL 171 (401)
Q Consensus 109 -~~~~v~~~~~--~~~---d-----~~~le~~~~~--~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ 171 (401)
.+..++.+.. ..+ + .+++++.++. ...+++.+|++.......|.+.+ ++++.++|++ +|++
T Consensus 703 ~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~--~g~l 780 (972)
T PRK06149 703 DWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRA--RGGV 780 (972)
T ss_pred CCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHH--cCCE
Confidence 1122222111 111 1 2344444432 11146889999988888898887 8999999999 9999
Q ss_pred EEEecccc-cCcc---eeccC--cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCC
Q 015729 172 FLVDGVSS-ICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (401)
Q Consensus 172 li~D~a~~-~~~~---~~~~~--~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 245 (401)
+|+||++. +|.. .+.++ ...+|+++++ |.++++.++|.+++++++.+.+... ..+ ++
T Consensus 781 lI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~g--K~lg~G~Pl~av~~~~~i~~~~~~~---~~~------------~s 843 (972)
T PRK06149 781 CIADEVQVGYGRLGHYFWGFEQQGVVPDIITMA--KGMGNGHPLGAVITRREIAEALEAE---GYF------------FS 843 (972)
T ss_pred EEEEeehhcCCccCccchhhhhcCCCCCEEEec--ccccCCeeeEEEEEcHHHHhhhccC---Ccc------------cC
Confidence 99999984 4321 11222 2347888765 9998777789999999988766531 000 11
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEcCCC-----CC
Q 015729 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH-----IN 318 (401)
Q Consensus 246 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~-----~~ 318 (401)
+++.++..+++..++++.+++++ ..++..+..+++++.|+++ ...+... ....+.++.+++-.. .+
T Consensus 844 --T~~gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~--vrG~Gl~~gvel~~~~~~~~~~ 916 (972)
T PRK06149 844 --STGGSPVSCRIGMAVLDVLREEK---LQENARRVGDHLKARLEALADRHPLIGA--VHGMGLYLGVELVRDRQTLEPA 916 (972)
T ss_pred --CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEE--EeecceEEEEEEecCcccCCCC
Confidence 22456677788889999887754 6777888888899998876 2443322 223556777776211 11
Q ss_pred ---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 319 ---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 319 ---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
...+++.|+++ ||.+.+... .++.+||.+...+|++|+|++++++++++++
T Consensus 917 ~~~~~~i~~~l~~~-Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 917 TEETAAICDRLLEL-GVIMQPTGD--HLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred hHHHHHHHHHHHhC-CeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 34678888876 999875421 2468999888789999999999999999865
No 345
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.5e-17 Score=142.21 Aligned_cols=313 Identities=21% Similarity=0.205 Sum_probs=221.3
Q ss_pred CcCChHHHHHHHccCcCCCC--C-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc-----c-CC--C-C
Q 015729 17 PVHIPDQVIRAMNRNNEDYR--S-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-----T-LS--P-G 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~--~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~-----~-~~--~-g 84 (401)
....+|.+++++++..+.-. + .-+.+...++.+.+.+++|.+. ++..+.|.+|.+.++.- . .+ | .
T Consensus 73 qGhchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf~~~k---vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~n 149 (427)
T KOG1402|consen 73 QGHCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLFGYDK---VLPMNTGAEAVETACKLARKWGYRKKNIPKN 149 (427)
T ss_pred cCCCCHHHHHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhcCcce---eeecccchhHHHHHHHHHHHHHHhhccCCcc
Confidence 46677999999999765321 1 2245667789999999998876 78888889999988722 1 12 3 4
Q ss_pred CeEEEEcCCcchH-HHH--------HHHHHcCC----cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcc
Q 015729 85 DRIISFLIGQFSL-LWI--------DQQQRLNF----NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (401)
Q Consensus 85 d~vl~~~~~~~~~-~~~--------~~~~~~g~----~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG 151 (401)
..+++...+.|.. ... ..-+.+|- .+..|+.+ |.++|+.+++. +.++++++...+...|
T Consensus 150 ka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~---~~vaaFivEPIQGEaG 221 (427)
T KOG1402|consen 150 KAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKS---PNVAAFIVEPIQGEAG 221 (427)
T ss_pred ceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcC---CCeeEEEeeccccccc
Confidence 4455544433322 111 01111221 12222222 78999999986 5789999999999999
Q ss_pred cccc----hHHHHHHhhhcCCCcEEEEecccccCc-----ceeccCcccceEEEecCCCcccCC-CcceEEEecHHHHHH
Q 015729 152 VTNN----LSKVRKLLDEYRHPALFLVDGVSSICA-----IDFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEA 221 (401)
Q Consensus 152 ~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~-----~~~~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~ 221 (401)
++.| +++..++|.+ ||+++|.|+.|.... +..+.+...+|++++. |.++|+ .+.+.+.++++++-.
T Consensus 222 VvvP~~GYL~~vreLCtk--ynvl~I~DEvQTGl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~~im~~ 297 (427)
T KOG1402|consen 222 VVVPPPGYLKKVRELCTK--YNVLLIADEVQTGLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADDDIMLN 297 (427)
T ss_pred eEeCCchhHHHHHHHHHh--hcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecHHHHhc
Confidence 9986 7899999999 999999999987543 2457777789999987 888665 467888888998777
Q ss_pred hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCcc--ccC
Q 015729 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN--CTQ 299 (401)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~ 299 (401)
+.+... |+ .+.-++++++...++++.+.++ ++.++..++.+.++..|.++.-++ ..
T Consensus 298 ~~pgeH----------------gs--TyggNpLg~~vaiAalevi~ee---kL~era~~lG~~l~~~L~~l~~~~p~~v- 355 (427)
T KOG1402|consen 298 IKPGEH----------------GS--TYGGNPLGCAVAIAALEVIVEE---KLVERAAKLGEILRDQLNKLQKKFPHVV- 355 (427)
T ss_pred cCCCcc----------------cc--ccCCChHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccccccchh-
Confidence 765432 22 2235567778889999998874 688999999999999999973332 11
Q ss_pred CCccCCceeEEEEcC----CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 300 KEEWFSDTVTAVIVP----SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~----~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
+.....+.+..+.+. .+.++.++|-.|.++ |+.-.+. .++.+||.+...++++|+++.+++|.+++.
T Consensus 356 ~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~-g~LAkpt----H~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 356 KEVRGRGLLNAIVINPSKTSGQDAWDVCLALKEN-GLLAKPT----HGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred heeeccceEEEEEeccccccchhHHHHHHccccc-ccccCCC----CCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 122245566666662 235677888888776 7664433 256899999889999999999999988763
No 346
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.80 E-value=6.8e-17 Score=155.09 Aligned_cols=311 Identities=14% Similarity=0.121 Sum_probs=200.1
Q ss_pred hHHHHHHHccCcCC--CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcch
Q 015729 21 PDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFS 96 (401)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~ 96 (401)
+|.+.+++.++... +.. ...+...++.++|.+.... .+.+.|+++|++|++.++.. ......+|+....+||+
T Consensus 71 ~p~v~~ai~~q~~~~~~~~-~~~~~~~~la~~l~~~~p~--~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG 147 (428)
T PRK12389 71 HPHITKAITEAAENGVLYG-TPTELEIEFAKMLKEAIPS--LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHG 147 (428)
T ss_pred CHHHHHHHHHHHHhCCccC-CCCHHHHHHHHHHHHhCCC--CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCC
Confidence 35555555554321 111 1234456777777776642 24599999999999998843 23445678888888888
Q ss_pred HHHHHHHHHcCC-------------------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc--
Q 015729 97 LLWIDQQQRLNF-------------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (401)
Q Consensus 97 ~~~~~~~~~~g~-------------------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-- 155 (401)
.....+.. .+. ++..++ . -|++.+++.+.+.. +++.+|++....+..|.+.|
T Consensus 148 ~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~d~~~l~~~l~~~~-~~vaavi~EPv~g~~G~~~p~~ 220 (428)
T PRK12389 148 HSDLVLVA-AGSGPSTLGTPDSAGVPKSIAQEVITVP--F---NDIEALKEALDKWG-DEVAAVLVEPIVGNFGIVEPKP 220 (428)
T ss_pred ChHHHHHh-cCCcccccCCCCCCCCCCcccCceEEcC--C---CCHHHHHHHHHhcC-CcEEEEEEeCCCCCCCCcCCCH
Confidence 76322221 111 111111 1 17899999887544 46889999988888898887
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCccee----ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICAIDF----RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~~~~----~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+++|.++|++ +|+++|+||++..+-..+ ......+|+++++ |.++++.++|.+++++++.+.+.... .
T Consensus 221 ~yl~~l~~lc~~--~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~g--K~lggG~Pi~av~~~~~i~~~~~~~~--~ 294 (428)
T PRK12389 221 GFLEAVNELAHE--AGALVIYDEVITAFRFMYGGAQDLLGVEPDLTALG--KIIGGGLPIGAYGGRKDIMEQVAPLG--P 294 (428)
T ss_pred HHHHHHHHHHHH--cCCEEEEEccccccccCcchhhHHhCCCCCeeeec--hhhcCCCceeEEeEHHHHHhhhccCC--C
Confidence 8999999999 999999999987541111 1112347887665 99987777899999999887764211 0
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCce
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDT 307 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~ 307 (401)
.+. + .+++.++..+++..++++.+.+++ ..++..++.+++++.|+++ ...+.... ....+
T Consensus 295 ~~~-----------~--~T~~gnpl~~Aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~v-~r~~g- 356 (428)
T PRK12389 295 AYQ-----------A--GTMAGNPASMAAGIACLEVLQQEG---VYEKLDRLGAMLEEGILEAAEKHGITITI-NRLKG- 356 (428)
T ss_pred ccc-----------c--cCCccCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EecCc-
Confidence 000 1 133466777888899999887653 6777888888898888874 22221110 01122
Q ss_pred eEEEEcCC-CC---------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 308 VTAVIVPS-HI---------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 308 ~~~~~~~~-~~---------~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
++.+.+.+ .. + ...+.+.|.++ ||.+.+... +.+. +...+|++|++++++++++++++
T Consensus 357 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~----~~~~--~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 357 ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ-GINLAPSKY----EAWF--LTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC-CcEeecCCC----CCee--ecCCCCHHHHHHHHHHHHHHHHh
Confidence 44454421 11 1 34677777766 999876421 2233 34567999999999999999865
No 347
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.80 E-value=5.6e-17 Score=163.96 Aligned_cols=318 Identities=14% Similarity=0.046 Sum_probs=222.6
Q ss_pred CcCChHHHHHHHccCcCC---C--CCcc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-C--CCC
Q 015729 17 PVHIPDQVIRAMNRNNED---Y--RSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-L--SPG 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~---~--~~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~--~~g 84 (401)
|...|+.+.+.+.+.... + ++++ ..+..-+++.+++++.|.+-.. ..+..++|++.++++.+. . +++
T Consensus 75 ~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aN-aSl~d~atA~aEa~~~a~~~~~~~~ 153 (939)
T TIGR00461 75 GTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVAN-ASLLDEGTAAAEAMALSFNVSKKKA 153 (939)
T ss_pred CCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhh-hhccchhhHHHHHHHHHHHhhcCCC
Confidence 566677776566664321 1 1222 2344668999999999998543 567788888888766553 2 234
Q ss_pred CeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHH
Q 015729 85 DRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 85 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
++|++++..|+... +...++..|++++.++ ++++++.++ +.++++. ..|.+|.+.|+++|.++
T Consensus 154 ~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~~------~~~v~~q-~Pn~~G~ied~~~i~~~ 218 (939)
T TIGR00461 154 NKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAVD------VFGCLLQ-YPATDGSILDYKQLIDA 218 (939)
T ss_pred CEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcCC------EEEEEEE-CCCCCeEEecHHHHHHH
Confidence 78999999887765 4456678899988884 445555442 3444444 45779999999999999
Q ss_pred hhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCccc----CCCcceEEEecHHHHHHhccCCCC---------c
Q 015729 163 LDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALS----LPTGMGIVCASPKALEASKTAKSV---------R 229 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~----g~~g~G~l~~~~~~~~~~~~~~~~---------~ 229 (401)
+|+ .|.++++++-........+..++|+||++.+.+++.. |+++.|++++++++.+.++..... .
T Consensus 219 ~h~--~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~ 296 (939)
T TIGR00461 219 LHS--HKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTA 296 (939)
T ss_pred HHH--cCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCcc
Confidence 999 9999999776655556667778899999887776432 245679999999998888765532 0
Q ss_pred cc--cchHHHHHHhhcCCCCCCCCcHHH---HHHHHHH--HHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCc
Q 015729 230 VF--FDWKDYIKFYNLGTFWPYTPSIQL---LYGLRAA--LDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEE 302 (401)
Q Consensus 230 ~~--~~~~~~~~~~~~g~~~~~~~~~~~---~~a~~~a--l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 302 (401)
+. .+..++..+.++++ +++.. +.++.++ +.++..+|++++.++...++.++.+.|.+.|+++... .
T Consensus 297 ~~l~LqtReqhIrRekAt-----SNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~ 369 (939)
T TIGR00461 297 LRLALQTREQHIRRDKAT-----SNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--T 369 (939)
T ss_pred ceeecccccccccccccC-----cchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--C
Confidence 11 12233445666665 44432 3333334 3445577899999999999999999999999988753 2
Q ss_pred cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
... -+.++++ ..+++++.+.+.++ ||.++.. .++.+++++..++|++||+.+++.+.
T Consensus 370 -fF~-~~~v~~~-~~~~~~i~~~~~~~-gi~l~~~----~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 370 -WFD-TLTVKVG-NGISSELLKAAEEF-NINLRAV----DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -ccc-eEEEEeC-CCCHHHHHHHHHHC-CCeeeec----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 222 2335553 23678899999876 9887642 24689999999999999999999985
No 348
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=9.7e-17 Score=154.75 Aligned_cols=323 Identities=14% Similarity=0.116 Sum_probs=201.8
Q ss_pred CChHHHHHHHccCcCC----CCCccHHHHHHHHHHHHHHHhcCCC-CceE-EecCChhHHHHHHHhc--cCCCCCeEEEE
Q 015729 19 HIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTS-GTPF-LIPTTGTGAWESALTN--TLSPGDRIISF 90 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g~~~-~~~i-~~~~g~t~a~~~~~~~--~~~~gd~vl~~ 90 (401)
.-+|++.+++.++... +......+...++.+++.+.+.... ...+ +++++|++|++.++.. .....++|+..
T Consensus 74 H~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~ 153 (459)
T PRK06931 74 HNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISF 153 (459)
T ss_pred CCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3345566665554321 1111223455677788877764321 1124 5568999999998843 23445689999
Q ss_pred cCCcchHHHHHHHHHc-----------CCcEEEEeCCCCCC--C------ChHHH----HHHHhc--cCCCCceEEEEEe
Q 015729 91 LIGQFSLLWIDQQQRL-----------NFNVDVVESDWGEG--A------KLDVL----ASKLAA--DTAHTIKAICIVH 145 (401)
Q Consensus 91 ~~~~~~~~~~~~~~~~-----------g~~~~~v~~~~~~~--~------d~~~l----e~~~~~--~~~~~~~~i~~~~ 145 (401)
..+||+.....+.... ...+..++.+...+ + +.+.+ ++.+++ ...+++.+|++..
T Consensus 154 ~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EP 233 (459)
T PRK06931 154 SGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEA 233 (459)
T ss_pred CCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEcc
Confidence 9999988733332110 01233344322111 0 22333 333332 0113588999998
Q ss_pred cCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEecH
Q 015729 146 NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASP 216 (401)
Q Consensus 146 ~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~ 216 (401)
.+...|.+.+ ++++.++|++ +|+++|.||++..... .+ +.....+|+++++ |.++++.++|.+..++
T Consensus 234 iqg~gG~~~~~~~yl~~lr~lc~~--~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~ 309 (459)
T PRK06931 234 IQGEGGVNPAPVEWLQKIREVTQK--HGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK 309 (459)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH
Confidence 8888888765 7889999999 9999999999763321 11 1223347888886 9998877788888877
Q ss_pred HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CC
Q 015729 217 KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GL 294 (401)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~ 294 (401)
+. +.+.... .++ +++.++..+++..++++.+.+++ ..++..+..++|.+.|+++ ..
T Consensus 310 ~~-~~~~~~~----------------~~~--T~~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~ 367 (459)
T PRK06931 310 EF-DAWQPGG----------------HTG--TFRGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRY 367 (459)
T ss_pred HH-hhccCCC----------------CCC--CCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhC
Confidence 64 4442110 011 33466677888889999887764 6677788888888888875 34
Q ss_pred ccccCCCccCCceeEEEEcCCC---------C--C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHH
Q 015729 295 KNCTQKEEWFSDTVTAVIVPSH---------I--N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLL 360 (401)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~---------~--~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~ 360 (401)
.+... ....+.++.+++.+. . + ...+...|.++ ||.+.+... .++.+|+.+...+|++|+|
T Consensus 368 ~~i~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~--~~~~l~~~Ppl~it~~eid 442 (459)
T PRK06931 368 PCIGN--VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN-GLLLERGGR--NGNVVRLLPPLLITQAECE 442 (459)
T ss_pred CCeEe--EecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEECCCCcCHHHHH
Confidence 33221 224566777776321 0 1 23466667666 988865321 2578999888899999999
Q ss_pred HHHHHHHHHHHh
Q 015729 361 GCLAGVEMILKD 372 (401)
Q Consensus 361 ~~~~~i~~~l~~ 372 (401)
++++++++++++
T Consensus 443 ~~~~~l~~~l~~ 454 (459)
T PRK06931 443 EFIDRFEQALLA 454 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 349
>PRK07480 putative aminotransferase; Validated
Probab=99.80 E-value=1.1e-16 Score=154.31 Aligned_cols=303 Identities=14% Similarity=0.089 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C----C-C-CCeEEEEcCCcchHHHHHHHH--------
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L----S-P-GDRIISFLIGQFSLLWIDQQQ-------- 104 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~----~-~-gd~vl~~~~~~~~~~~~~~~~-------- 104 (401)
.+...++.++|.+.+.... +.+.|+++|++|++.++... . . + ..+|+....+||+.....+.-
T Consensus 93 ~~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~ 171 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGF-NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHE 171 (456)
T ss_pred CHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhc
Confidence 3556678888888875332 35999999999999988431 1 1 2 346888888888865322111
Q ss_pred HcCC---cEEEEeCCCCC--C--CC--------hHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhh
Q 015729 105 RLNF---NVDVVESDWGE--G--AK--------LDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (401)
Q Consensus 105 ~~g~---~~~~v~~~~~~--~--~d--------~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~ 165 (401)
..+. .+..++.+... . .+ .+.+++.+.+...+++.+|++...+...|...+ ++++.++|++
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~ 251 (456)
T PRK07480 172 QGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRK 251 (456)
T ss_pred ccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0010 11222211100 0 01 256665554332257889999998888888776 7889999999
Q ss_pred cCCCcEEEEecccc-cCcc--e--eccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCCCCccccchHHHHH
Q 015729 166 YRHPALFLVDGVSS-ICAI--D--FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (401)
Q Consensus 166 ~~~~~~li~D~a~~-~~~~--~--~~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
+|+++|+||++. +|-. . ++.....+|+++++ |.++++. ++|.+++++++.+.+.... ..
T Consensus 252 --~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~-~~---------- 316 (456)
T PRK07480 252 --YDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIA--KGLTSGYIPMGAVGVGDRVAEVLIEEG-GE---------- 316 (456)
T ss_pred --cCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeee--hhhccCCccceEEEEcHHHHHHHhcCC-CC----------
Confidence 999999999985 3211 1 12223347888776 9997763 6899999999877663110 00
Q ss_pred HhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHH-HHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC-
Q 015729 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERH-RRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH- 316 (401)
Q Consensus 240 ~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~-~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 316 (401)
+..++ +++.++..+++..++|+.+.+++ ..++. .+..+++.+.|+++ ...+... ....+.++.+++-+.
T Consensus 317 -~~~~~--T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~--vrG~Glm~gie~~~~~ 388 (456)
T PRK07480 317 -FNHGF--TYSGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGE--VRGVGLVGAIELVKDK 388 (456)
T ss_pred -cccCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeee--EEeecceEEEEEeccc
Confidence 11122 34566778889999999988765 55566 46777777777765 3332221 123456677776211
Q ss_pred C------C----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 317 I------N----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 317 ~------~----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
. + ...+...++++ ||.+.+. ++.+||.+...+|++|+|+++++++++++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 389 ATRERFEAGGGVGTICRDHCFAN-GLIMRAV-----GDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred cccccCcchhhHHHHHHHHHHHC-CcEEeec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0 1 13566667766 9888532 4679998888889999999999999999764
No 350
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.80 E-value=6.8e-17 Score=159.29 Aligned_cols=299 Identities=11% Similarity=0.072 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-- 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-- 118 (401)
...+.+.++..|+.||++.. .++++|+|.+|.+++.+.+.+||+|++.-++|-|.. ......|+++++++...+
T Consensus 194 ~G~i~eAe~~AA~~fgAd~t--yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~--haLilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRS--YMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT--HLMMMSDVTPIYFRPTRNAY 269 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcE--EEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH--HHHHHcCCeEEEeccccccc
Confidence 45678999999999999874 577899999999999999999999999999988876 346778999999876432
Q ss_pred ---CCCC-----hHHHHHHHhccCC-CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc---ee-
Q 015729 119 ---EGAK-----LDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI---DF- 185 (401)
Q Consensus 119 ---~~~d-----~~~le~~~~~~~~-~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~- 185 (401)
+.++ ++.+++++++++. .+++.++++++ +..|.+++++.|+++|+. ++ |++|+||+.... .+
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~--~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDV--KS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCC--CC--EEEEccchhhhccCcccC
Confidence 2344 8999999987652 23447777765 678999999999999988 76 699999874321 11
Q ss_pred --ccCcccc---e--EEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHH
Q 015729 186 --RMDEWGI---D--VALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYG 258 (401)
Q Consensus 186 --~~~~~~~---d--i~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 258 (401)
.....+. | +++.|.||++.+....+++.++..+ +-......+.. +.+.+|+...+++
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v--------------d~~~~n~a~~m--~~STSPsY~l~AS 408 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV--------------NEETFNEAYMM--HTTTSPHYGIVAS 408 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCC--------------CHHHHHHHHHH--HcCCCcHHHHHHH
Confidence 1111233 4 8999999999877776776553321 11111111111 1234688888889
Q ss_pred HHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHc-C------CccccCCC-------------c------------cCC
Q 015729 259 LRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-G------LKNCTQKE-------------E------------WFS 305 (401)
Q Consensus 259 ~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~~-------------~------------~~~ 305 (401)
+..+...+.. .| ++..++..+.+..+++.+.++ + ++++.++. . ...
T Consensus 409 LD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 487 (714)
T PRK15400 409 TETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLD 487 (714)
T ss_pred HHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccC
Confidence 9999888774 44 678888889999999999886 4 44443210 0 013
Q ss_pred ceeEEEEcCC----------CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 306 DTVTAVIVPS----------HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 306 ~~~~~~~~~~----------~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.-+.+..|. |+++..+.+.|.+ +||.+.... ...+-+-+....|++++++++++|.+.-
T Consensus 488 P~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e-~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f~ 557 (714)
T PRK15400 488 PIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDE-HGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFK 557 (714)
T ss_pred CceEEEEeCCCCCCccccccCCCHHHHHHHHHH-cCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 3334444432 5678889999965 499876432 2333333444579999999999998763
No 351
>PRK06148 hypothetical protein; Provisional
Probab=99.80 E-value=5.3e-17 Score=169.96 Aligned_cols=339 Identities=12% Similarity=0.032 Sum_probs=216.3
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--c
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--T 80 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~ 80 (401)
|.++.++..+++.+...+.+++.+.+.+.. .+. ....+...++-++|.+.+.... +.+.|++|||+|++.+++. .
T Consensus 626 ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~-~~~-~~~~~~~~~lAe~L~~~~p~~~-~~v~f~nSGsEA~e~AlklAr~ 702 (1013)
T PRK06148 626 YLDCFNNVCHVGHAHPRVVAAAARQAARLN-TNT-RYLHDAIVAYAERLTATLPDGL-TVAFFVNSGSEANSLALRLARA 702 (1013)
T ss_pred EEEcccChhhcCCCCHHHHHHHHHHHhhcC-CcC-CcCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHH
Confidence 444444444455454444555545444421 121 1223455677788887764322 4589999999999998843 2
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHH-------HcC----CcEEEEeCC--CCCCC---C-------hHHHHHHHhc--cCC
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQ-------RLN----FNVDVVESD--WGEGA---K-------LDVLASKLAA--DTA 135 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~-------~~g----~~~~~v~~~--~~~~~---d-------~~~le~~~~~--~~~ 135 (401)
.....+|+....+||+.....+.. ..+ ..+..++.. ....+ + .+.+++.++. ...
T Consensus 703 ~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 782 (1013)
T PRK06148 703 HTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKG 782 (1013)
T ss_pred hcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccC
Confidence 344568999999888875321110 001 011122211 00111 1 1345555542 112
Q ss_pred CCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEeccccc-Ccc---eeccC--cccceEEEecCCCcccC
Q 015729 136 HTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSI-CAI---DFRMD--EWGIDVALTGSQKALSL 205 (401)
Q Consensus 136 ~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~-~~~---~~~~~--~~~~di~~~s~~K~l~g 205 (401)
+++.+|++.......|.+.+ ++++.++|++ +|+++|.||++.. |-. .+..+ ...+|+++++ |.+++
T Consensus 783 ~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~--~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~g--K~lgg 858 (1013)
T PRK06148 783 RGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRA--AGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMG--KPIGN 858 (1013)
T ss_pred CceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH--hCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeec--ccccC
Confidence 46889999988888888876 8899999999 9999999999853 211 12222 3347888775 99988
Q ss_pred CCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 015729 206 PTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKAT 285 (401)
Q Consensus 206 ~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l 285 (401)
+.++|.+++++++.+.+.... .+ + .+++.++..+++..++++.+.+++ ..++..+..++|
T Consensus 859 G~Plgav~~~~ei~~~~~~g~----~~-----------~--~Tf~gnpla~aaa~a~L~~i~~e~---l~~~~~~~G~~l 918 (1013)
T PRK06148 859 GHPMGAVVTTREIADSFDNGM----EY-----------F--NTFGGNPVSCAIGLAVLDIIEDED---LQRNALEIGNYL 918 (1013)
T ss_pred CcceEEEEEcHHHHhhccCCC----cc-----------c--cCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHH
Confidence 888999999999887664310 00 1 133456677888889999887754 777788888999
Q ss_pred HHHHHHc--CCccccCCCccCCceeEEEEcCCC-----CC---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCC
Q 015729 286 RLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH-----IN---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLN 355 (401)
Q Consensus 286 ~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~ 355 (401)
++.|+++ ...+... ....+.++.+++... .+ ...+.+.|+++ ||.+.+... .++.+||.+...+|
T Consensus 919 ~~~L~~l~~~~~~i~~--VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g~--~~~vlr~~Ppl~it 993 (1013)
T PRK06148 919 LAGLRELQDRFDIIGD--VRGMGLFLGIELVTDRKTKAPATAIARYVKNGARER-GILIGTEGP--HDNVLKIRPPLIFS 993 (1013)
T ss_pred HHHHHHHHHhCCCceE--EeeeceEEEEEecCCccccCccHHHHHHHHHHHHhC-CeEEeccCC--CCCEEEEeCCccCC
Confidence 9999875 3443321 223456777776321 11 23577777766 999865421 25789999888999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 015729 356 ELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 356 ~~di~~~~~~i~~~l~~~ 373 (401)
++|+|+++++++++++++
T Consensus 994 ~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 994 RADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999999764
No 352
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.79 E-value=1.9e-16 Score=152.61 Aligned_cols=291 Identities=14% Similarity=0.085 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHH-c-----------C
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQR-L-----------N 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~-~-----------g 107 (401)
+...++-++|.+.+.. -+.+.|+++||+|++.++.. .....++|+....+||+......... . |
T Consensus 139 ~~~~~lAe~l~~~~p~--~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 139 LLENVLAEMVIDAVPS--VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred HHHHHHHHHHHHhCCC--CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 4455777778777643 24699999999999998843 23445688888888888541001110 0 1
Q ss_pred C------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecc
Q 015729 108 F------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 108 ~------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a 177 (401)
. .+..++ .+ |++++++.+.+.. +++.+|++....+..|.+.| ++++.++|++ +|+++|+|++
T Consensus 217 ~~~~~~~~~~~~~--~n---d~~~l~~~l~~~~-~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~--~g~lLI~DEV 288 (474)
T PLN02482 217 VPKAATSATLTAP--YN---DLEAVKKLFEANK-GEIAAVILEPVVGNSGFIVPKKEFLEGLREITKE--NGALLVFDEV 288 (474)
T ss_pred CCCCCCCCeEEec--CC---ChHHHHHHHHhCC-CceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEecc
Confidence 1 111111 11 7899999887543 46889999988888898876 5679999999 9999999999
Q ss_pred cccCcce--e--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcH
Q 015729 178 SSICAID--F--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSI 253 (401)
Q Consensus 178 ~~~~~~~--~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 253 (401)
+...-.. . ......+|++++ .|.++++.++|.+.+++++++.+.... ..++ .+ +++.++
T Consensus 289 ~tGfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~ei~~~~~~~~--~~~~----------~~---T~~gnp 351 (474)
T PLN02482 289 MTGFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRREIMEMVAPAG--PMYQ----------AG---TLSGNP 351 (474)
T ss_pred ccCeecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcHHHHHhhccCC--Cccc----------cc---CcchhH
Confidence 8632110 1 111234788766 499987777899999999988765311 1111 11 223456
Q ss_pred HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEcCC-CC---------C-
Q 015729 254 QLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVPS-HI---------N- 318 (401)
Q Consensus 254 ~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~-~~---------~- 318 (401)
..+++..++++.+.+. +..++..++.+++++.|+++ |+++.... ..+ ++.+.+.+ .+ +
T Consensus 352 l~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~---v~g-~~gi~f~~~~~~~~~~~~~~d~ 424 (474)
T PLN02482 352 LAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKAGHEMCGGY---ISG-MFGFFFTEGPVYNFADAKKSDT 424 (474)
T ss_pred HHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcc---cce-EEEEEEecCCccChhhhccCCH
Confidence 6677788888888654 37778888888888888875 33333211 122 33344311 10 1
Q ss_pred --HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 319 --SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 319 --~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...+.+.|+++ ||.+.+..... ++ +...+|++|||+++++++++++++
T Consensus 425 ~~~~~~~~~l~~~-Gv~~~~~~~~~-----~~-psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 425 AKFARFHRGMLEE-GVYLAPSQFEA-----GF-TSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred HHHHHHHHHHHHC-CeEEeccCCCC-----Cc-CCCCCCHHHHHHHHHHHHHHHHhC
Confidence 23567777776 99987643221 12 455789999999999999998754
No 353
>PRK07046 aminotransferase; Validated
Probab=99.79 E-value=1.8e-16 Score=152.41 Aligned_cols=292 Identities=14% Similarity=0.086 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHH-Hc----------CC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQ-RL----------NF 108 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~-~~----------g~ 108 (401)
+...++.+.|.+.++. +.+.|+++||+|++.+++. .....++|+....+||+.....+.. .. |.
T Consensus 115 ~~~~~lAe~l~~~~~~---~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~ 191 (453)
T PRK07046 115 EDAAWVGEELARRFGL---PYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQ 191 (453)
T ss_pred HHHHHHHHHHHHHhCC---CEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCC
Confidence 4556788888887743 3599999999999998843 3344578888888888864111111 00 11
Q ss_pred ------cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEeccc
Q 015729 109 ------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 109 ------~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
.+..+ +.+ |++.+++.+.. +++.+|++.......|.+.+ ++++.++|++ +|+++|.||++
T Consensus 192 ~~~~~~~~~~~--~~n---d~~~l~~~l~~---~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~--~g~llI~DEV~ 261 (453)
T PRK07046 192 VHDLTATTRVV--EFN---DLAALEAALAD---GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRR--YGTLLVIDETH 261 (453)
T ss_pred CccccCceEee--CCC---CHHHHHHHhCC---CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH--hCCEEEEEccc
Confidence 11111 111 78999998853 46889999988888888876 7889999999 99999999998
Q ss_pred c----cCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHH
Q 015729 179 S----ICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (401)
Q Consensus 179 ~----~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 254 (401)
. .|... ..-...+|+++++ |.++|+.++|.+.+++++.+.+......... ..+ ....+++.++.
T Consensus 262 tfr~g~Gg~~-~~~gv~PDi~t~g--K~lggG~Pi~av~g~~~i~~~~~~~~~~~~~-------~~~--~~~~T~~gnpl 329 (453)
T PRK07046 262 TISSGPGGYT-RAHGLEPDFLVVG--KPIAGGVPCAVYGFSAELAERAQAAKASAPP-------GHS--GIGTTLSANAL 329 (453)
T ss_pred cCccCCcchh-HHhCCCccceeeh--hhhcCCCcceeeeehHHHHHHHhhccccCCC-------CCc--eeCCCCcccHH
Confidence 5 33221 1112347888765 9998888899999999998877532110000 000 01113446677
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEcC-CCC----------C-
Q 015729 255 LLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVP-SHI----------N- 318 (401)
Q Consensus 255 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~-~~~----------~- 318 (401)
.+++..++++.+.+++ ..++..+..++|++.|+++ ++..... ..+.++.+.+. +.. +
T Consensus 330 ~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~----g~G~~~~i~~~~~~~~~~~~~~~~~~~ 402 (453)
T PRK07046 330 AMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRAVIARHGLPWHVT----RVGARVEFQFAPTPPRNGAEAAAALDP 402 (453)
T ss_pred HHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEE----EeCcEEEEEEeCCCCCCHHHHhcccCH
Confidence 7888889998886643 5677777788888888763 3332221 12234445441 111 1
Q ss_pred --HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 319 --SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 319 --~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...+...|.++ ||.+.+. ++.+++++ .+|++|+|+++++++++++++
T Consensus 403 ~~~~~~~~~~~~~-Gv~~~~~-----~~~~~~~p--~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 403 ELEAALHLYLLNR-GVLITPF-----HNMMLVCP--ATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHHHHHHHHHC-CCEEecc-----cCcEEEeC--CCCHHHHHHHHHHHHHHHHHH
Confidence 12455556665 9987642 34577765 389999999999999999764
No 354
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.78 E-value=5.8e-16 Score=152.79 Aligned_cols=299 Identities=12% Similarity=0.092 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC--
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-- 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-- 118 (401)
...+.+.++..|+.||++.. .++++|+|.+|.+++.+.+.+||+|++.-++|-|.. ......|+++++++...+
T Consensus 194 ~G~i~eAe~~aA~~fgAd~t--yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~--~aLilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQS--YIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA--HLLMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcE--EEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH--HHHHHcCCeeEEeccccccc
Confidence 45678999999999999874 577899999999999999999999999999998876 346678999999875432
Q ss_pred ---CCCCh-----HHHHHHHhccCC-CCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc--e-e-
Q 015729 119 ---EGAKL-----DVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI--D-F- 185 (401)
Q Consensus 119 ---~~~d~-----~~le~~~~~~~~-~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~--~-~- 185 (401)
+.+++ +.+++++++++. ++|+.++++++ +.-|.++++++|++.|.- . +|++|+||+.... + +
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~g~--~--~ilvDEAhgah~~F~p~~~ 344 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTLDV--P--SIHFDSAWVPYTHFHPIYQ 344 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHhCC--C--EEEEeccchhhhhcCcccC
Confidence 23455 899999987653 35678888876 678999999999999832 1 4579999874221 1 1
Q ss_pred --ccCcc--cceEE---EecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHH
Q 015729 186 --RMDEW--GIDVA---LTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYG 258 (401)
Q Consensus 186 --~~~~~--~~di~---~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 258 (401)
..... +.|.. +.|.||++.+....+++.++..+ +.......+.. +.+.+|+...+++
T Consensus 345 ~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v--------------d~~~~n~a~~m--~~STSPsY~LmAS 408 (713)
T PRK15399 345 GKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY--------------DEETFNEAFMM--HTSTSPSYPIVAS 408 (713)
T ss_pred CcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC--------------CHHHHHHHHHH--HcCCCcHHHHHHH
Confidence 11111 45766 89999999888888888775431 11111111111 1234688888889
Q ss_pred HHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHc-C------CccccCC-------------Cc------------cCC
Q 015729 259 LRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-G------LKNCTQK-------------EE------------WFS 305 (401)
Q Consensus 259 ~~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~-------------~~------------~~~ 305 (401)
+..+...+.. .| ++..++..+.+..+++.+.++ + ++++.++ +. ...
T Consensus 409 LD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lD 487 (713)
T PRK15399 409 VETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLD 487 (713)
T ss_pred HHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCC
Confidence 9999888874 45 678888888888899888875 3 3333210 00 113
Q ss_pred ceeEEEEcC----------CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 306 DTVTAVIVP----------SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 306 ~~~~~~~~~----------~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+.-+.+..| .|+++..+.+.|.++ ||.+.... ...+-+-+....+++++++++++|.+.-
T Consensus 488 P~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~-gI~~E~~d----~~~vL~l~s~g~t~~~~~~L~~aL~~f~ 557 (713)
T PRK15399 488 PVKVTILTPGMDEQGNMSEEGIPAALVAKFLDER-GIVVEKTG----PYNLLFLFSIGIDKTKAMGLLRGLTEFK 557 (713)
T ss_pred CceEEEEecCcccccccccCCCCHHHHHHHHHHc-CCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 334444443 267888999999654 99876442 2233333444569999999999998763
No 355
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.78 E-value=2e-16 Score=151.98 Aligned_cols=301 Identities=15% Similarity=0.167 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--C--------C---C-CCeEEEEcCCcchHHHHHHHHHcC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L--------S---P-GDRIISFLIGQFSLLWIDQQQRLN 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~--------~---~-gd~vl~~~~~~~~~~~~~~~~~~g 107 (401)
+...++.++|.++.+.+.-..+.|++||++|++.++.-. . . + ..+|+....+||+.....+....+
T Consensus 92 ~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~ 171 (443)
T PRK08297 92 VEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNT 171 (443)
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCC
Confidence 445567777777763222245999999999999988432 1 1 1 257999999999886433222111
Q ss_pred Cc----------EEEEeCCC------CCC---C------ChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHH
Q 015729 108 FN----------VDVVESDW------GEG---A------KLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSK 158 (401)
Q Consensus 108 ~~----------~~~v~~~~------~~~---~------d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~ 158 (401)
-. ...++... +.. . +++++++.+.+.+ +++.++++.......|.+.+ +++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~iAavI~EPi~g~~G~~~pp~~yl~~ 250 (443)
T PRK08297 172 DPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHP-HDIACFIAEPIQGEGGDNHFRPEFFAA 250 (443)
T ss_pred cccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCC-CcEEEEEEccccCCCCCcCCCHHHHHH
Confidence 00 00011000 000 0 2456667776544 57899999988888888753 788
Q ss_pred HHHHhhhcCCCcEEEEecccccC-cc--ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccc
Q 015729 159 VRKLLDEYRHPALFLVDGVSSIC-AI--DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~-~~--~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
|.++|++ +|+++|.||++... -. .+ +.....+|+++++ |.+ +. .|++ ..++..+.........
T Consensus 251 lr~lc~~--~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--K~l--~~-~a~l-~~~~i~~~~~~~~~~~---- 318 (443)
T PRK08297 251 MRELCDE--HDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFG--KKT--QV-CGIM-AGRRVDEVEDNVFAVS---- 318 (443)
T ss_pred HHHHHHH--cCCEEEEechhhccCccchHHHHHhcCCCCCEEEec--ccc--cc-ccee-cchHHHHhhhhhccCc----
Confidence 9999999 99999999998632 21 11 1122358988875 876 22 2444 4444322111000000
Q ss_pred hHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEE
Q 015729 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAV 311 (401)
Q Consensus 234 ~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~ 311 (401)
...+.+++.++..+++..++++.+.++ +..++..++.+++++.|+++ .++.... .....+.++.+
T Consensus 319 ---------~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~-~vrg~G~~~~i 385 (443)
T PRK08297 319 ---------SRINSTWGGNLVDMVRARRILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVS-NVRGRGLMCAF 385 (443)
T ss_pred ---------cccCCCCCccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcce-eeeccceEEEE
Confidence 001123345667778888888888765 36777888888888888775 2332210 11134567778
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
++++......+.+.|.++ ||.+.+.. ...+||.+...+|++|+|+++++++++++++
T Consensus 386 ~~~~~~~~~~~~~~l~~~-Gvl~~~~~----~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 386 DLPTTADRDEVIRRLWEE-GVLVLPCG----ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EecCHHHHHHHHHHHHHC-CEEEecCC----CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 885432345788888865 99986531 3579998888899999999999999998765
No 356
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.77 E-value=7.2e-17 Score=137.43 Aligned_cols=345 Identities=16% Similarity=0.204 Sum_probs=238.6
Q ss_pred CCCCCCcccccCCCcCChHHHHHHHccCc------------CCCCCccHHHHHHHHHHHHHHHhcCCCCceEEe-cCChh
Q 015729 4 MYAPGKNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGT 70 (401)
Q Consensus 4 ~~~~~~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t 70 (401)
+.+|++..+|++||..+|..|+..+++.. .+|++..+..++.+.+..++++++.++...++| .+|||
T Consensus 2 ~~a~~~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt 81 (370)
T KOG2790|consen 2 MDAPERVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGT 81 (370)
T ss_pred CCCccceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCc
Confidence 56799999999999999999988877722 236778888999999999999999997766766 56777
Q ss_pred HHHHHHHhccC--CCCCeEEEEcCCcchHHHHHHHHHcCC-cEEEEeCC---CCCCCChHHHHHHHhccCCCCceEEEEE
Q 015729 71 GAWESALTNTL--SPGDRIISFLIGQFSLLWIDQQQRLNF-NVDVVESD---WGEGAKLDVLASKLAADTAHTIKAICIV 144 (401)
Q Consensus 71 ~a~~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~~~g~-~~~~v~~~---~~~~~d~~~le~~~~~~~~~~~~~i~~~ 144 (401)
....++..++. +.|+..--+..|.+|.-...-+..+|. +.+..+.. .+..+|++.++-.- +-+.+++|
T Consensus 82 ~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~------da~yvyyC 155 (370)
T KOG2790|consen 82 GQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNP------DASYVYYC 155 (370)
T ss_pred ccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCC------CccEEEEe
Confidence 66655555543 455322222234565543344555554 34443332 12345666555322 23688999
Q ss_pred ecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhcc
Q 015729 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 145 ~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~ 224 (401)
...+..|+-.+--. +- .++|.+++.|-.+-+.+.++|+.+ .+++....+|.+ |+.|+-+++++++++.+...
T Consensus 156 aNETVHGVEf~~~P---~~--~~~~~vlVaDmSSnflSrpvDvsk--~gvi~aGAQKN~-G~aG~Tvvivr~dllg~~~~ 227 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP---VN--DPKGAVLVADMSSNFLSRPVDVSK--FGVIFAGAQKNV-GPAGVTVVIVRKDLLGNALD 227 (370)
T ss_pred cCceeeceecCCCC---CC--CCCCceEEEecccchhcCCccchh--cceEEecccccc-CccccEEEEEehhhhccccc
Confidence 88888888764322 11 248999999999888888999886 567888999998 69999999999999776543
Q ss_pred CCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
. ....++++.+. ...+..+|+|+.+++.+...++++.+.| ++...+...+.++.+.+.+.+- |+-..+.++.
T Consensus 228 ~--tP~v~dyk~~~----~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~ 301 (370)
T KOG2790|consen 228 I--TPSVLDYKIMD----KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPS 301 (370)
T ss_pred C--Cccccceeeec----cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchh
Confidence 2 22233333222 2345677899999999999999998776 8888888889999999999986 7776666666
Q ss_pred cCCceeEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 303 WFSDTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 303 ~~~~~~~~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+|-.-+.|++.+ +++ +++.+...++ +..-..|.- .=+.+|-|.+..++-++++++++-+++..+.
T Consensus 302 ~RS~MNV~Fri~~d~Le-~eFLkeA~~~-~mv~LKGhR--SVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 302 VRSRMNVPFRIEKDELE-AEFLKEAAKE-HMVQLKGHR--SVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhhhcccceeecchHHH-HHHHHHHHHh-hhhcccccc--ccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 6666666677632 222 2333333334 322122211 1245899999999999999999999988764
No 357
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.76 E-value=1.5e-18 Score=156.43 Aligned_cols=251 Identities=18% Similarity=0.141 Sum_probs=171.9
Q ss_pred ChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-
Q 015729 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL- 98 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~- 98 (401)
..+++++++.+.......|..++...++++.+++++|.+. .+|+++||.|+.+++++.++|++.|++..++|....
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~e~---a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E 83 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGKEA---ALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDE 83 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTSSE---EEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSS
T ss_pred CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCCCE---EEEeCCCChHHHHHHHHHHhcCCceeccccceeeeec
Confidence 5677888886655444467778899999999999999976 679999999999999998899999999988766554
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC--CCceEEEEEecCCCc-ccccc---hHHHHHHhhhcCCCcEE
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETAT-GVTNN---LSKVRKLLDEYRHPALF 172 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~--~~~~~i~~~~~~n~t-G~~~~---l~~i~~l~~~~~~~~~l 172 (401)
........|++++.++.+.++.+|++++++.+.+... .++++|+++++++.. |.+++ +++|.++|++ +|+.+
T Consensus 84 ~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~--~gl~l 161 (290)
T PF01212_consen 84 TGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELARE--HGLPL 161 (290)
T ss_dssp TTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHH--HT-EE
T ss_pred cchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHh--CceEE
Confidence 3334466899999999887688999999999987432 368899999887753 77776 5567888888 99999
Q ss_pred EEeccccc------CcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhh-cCC
Q 015729 173 LVDGVSSI------CAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN-LGT 245 (401)
Q Consensus 173 i~D~a~~~------~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~ 245 (401)
+.|++--+ +....+.. .++|++.+|++|.++.+.| ++|+++++++++.... .+.....+. .|
T Consensus 162 hmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~G-avl~~~~~~i~~~~~~--------~k~~gg~~~~~G- 230 (290)
T PF01212_consen 162 HMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGG-AVLAGNKEFIAKARRQ--------RKRLGGGMRQAG- 230 (290)
T ss_dssp EEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSE-EEEEESHHHHHHHHHH--------HHHHTHHHHHTT-
T ss_pred EEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccc-eEEEechHHHHHHHHH--------HHHhccCeeecc-
Confidence 99987421 11112222 4799999999998865554 9999999975543321 000001111 11
Q ss_pred CCCCCCcHHHHHHH-----HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCcccc
Q 015729 246 FWPYTPSIQLLYGL-----RAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCT 298 (401)
Q Consensus 246 ~~~~~~~~~~~~a~-----~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 298 (401)
. .++ ..++..+ + .......+..+.++.+.+.|+.++..+..
T Consensus 231 -------~---~~a~~~~~~~~l~~l-~-~~~~~~~~~~~~A~~La~~l~~~~~~~~~ 276 (290)
T PF01212_consen 231 -------V---LAAAELYQFAALRAL-E-LWLERARHANAMAKRLAAGLEALGGVLPR 276 (290)
T ss_dssp -------H---HHHHHHHHHHHHCHE-E-CSHHHHHCHHHHHHCHHHCHHEECEEEET
T ss_pred -------e---eeeechhhHHHHHHH-H-hhHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 1 111 1111111 1 12456677788899999999888765443
No 358
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.76 E-value=7.2e-16 Score=150.97 Aligned_cols=282 Identities=13% Similarity=0.073 Sum_probs=186.0
Q ss_pred CCCcccccCCCcCChHHHHHHHccCcCC-----CCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--
Q 015729 7 PGKNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-- 79 (401)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~-- 79 (401)
|++.+..-++|..++.-+-+.+....+. ..++....+..++-+.+++++|.+.. +-++|+|||.|+..++..
T Consensus 83 P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-~G~~TsGGT~ANl~aL~~AR 161 (608)
T TIGR03811 83 AGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-WGHIVADGSLANLEGLWYAR 161 (608)
T ss_pred ccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-CeEEeCChHHHHHHHHHHHH
Confidence 3344444445544443333433332211 23566667788999999999998764 367899999998865522
Q ss_pred -cC------CC-------------------------------------------CC------eEEEEcCCcchHHHHHHH
Q 015729 80 -TL------SP-------------------------------------------GD------RIISFLIGQFSLLWIDQQ 103 (401)
Q Consensus 80 -~~------~~-------------------------------------------gd------~vl~~~~~~~~~~~~~~~ 103 (401)
.. +. |. +++++...|+|. .+.+
T Consensus 162 ~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~--~KAa 239 (608)
T TIGR03811 162 NIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSW--LKAA 239 (608)
T ss_pred HhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHH--HHHH
Confidence 10 00 00 456666666665 4778
Q ss_pred HHcCC---cEEEEeCCCCCCCChHHHHHHHhccC--CCCceEEEEEecCCCcccccchHHHHHHhhh-cCCCc--EEEEe
Q 015729 104 QRLNF---NVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPA--LFLVD 175 (401)
Q Consensus 104 ~~~g~---~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~-~~~~~--~li~D 175 (401)
...|+ +++.|+++.++++|+++|++.+++.. +..+-+|+.+.+++.+|.+.|+++|.++|++ ..+|+ |+|+|
T Consensus 240 ~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVD 319 (608)
T TIGR03811 240 DIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVD 319 (608)
T ss_pred HHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeee
Confidence 88888 69999999999999999999997531 1234567888889999999999999999943 12776 79999
Q ss_pred cccccCc--ceec--------------------c----------------CcccceEEEecCCCcccCCCcceEEEecHH
Q 015729 176 GVSSICA--IDFR--------------------M----------------DEWGIDVALTGSQKALSLPTGMGIVCASPK 217 (401)
Q Consensus 176 ~a~~~~~--~~~~--------------------~----------------~~~~~di~~~s~~K~l~g~~g~G~l~~~~~ 217 (401)
+|++... +..+ + .-.++|.++..+||++..|.++|.+++++.
T Consensus 320 AAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 320 AAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred ccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 9988532 1111 0 013689999999999999999998888876
Q ss_pred HHHHhccCCCCccccchHHHHHHhhcCCC-CCCCCcHHHHHHHHHHHHHH--HHhcHHHHHHHHHHHHHHHHHHHHHcC
Q 015729 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTF-WPYTPSIQLLYGLRAALDLI--FEEGLENVIERHRRLGKATRLAVEAWG 293 (401)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~g 293 (401)
.........+.+.+..-..... ..|.+ .-++.+-...++++.+++.+ ...|+.++.++..++++++.+.|++.+
T Consensus 400 ~~~~~~~~~a~Yl~~~~~~~p~--~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~ 476 (608)
T TIGR03811 400 RMRDVISYFATYVFEKGADIPA--LLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLE 476 (608)
T ss_pred HHHHHHhcCcchhccccccCcc--cccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5433322222211110000000 00111 11123335567888999887 677899999999999999999998853
No 359
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.76 E-value=3.5e-16 Score=139.29 Aligned_cols=320 Identities=16% Similarity=0.079 Sum_probs=210.6
Q ss_pred cCChHHHHHHHccCcCC--CC-CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcC
Q 015729 18 VHIPDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLI 92 (401)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~ 92 (401)
...+|.|.+++.++... |. .-.....+.++.+.|...+-.+-. .++|+++|++|+++++.- .....-.++....
T Consensus 65 GHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~-~vfF~nsGsEANelal~mar~Yt~~~diIa~r~ 143 (442)
T KOG1404|consen 65 GHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLK-VVFFVNSGSEANELALKMARLYTGNLDIIARRN 143 (442)
T ss_pred CCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCce-EEEEecCCchHHHHHHHHHHHhcCCceEEEeec
Confidence 45667788887775532 21 112233455666777766654432 389999999999998732 2333347888888
Q ss_pred CcchHHHHHHHHHcCCcEEEEeCC-----------CC---CCC-----------ChHHHHHHHhccCCCCceEEEEEecC
Q 015729 93 GQFSLLWIDQQQRLNFNVDVVESD-----------WG---EGA-----------KLDVLASKLAADTAHTIKAICIVHNE 147 (401)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~-----------~~---~~~-----------d~~~le~~~~~~~~~~~~~i~~~~~~ 147 (401)
+||+..... +...+.....-+.+ ++ +.+ -.+++++.+..+..+++.+++...++
T Consensus 144 ~YHG~t~~t-~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIq 222 (442)
T KOG1404|consen 144 SYHGNTLYT-LGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQ 222 (442)
T ss_pred cccCCchhh-cccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhc
Confidence 898876322 11122222221111 10 000 12456666655555678899999999
Q ss_pred CCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc---eeccCcccceEEEecCCCcccCCCcceEEEecHHHHH
Q 015729 148 TATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (401)
Q Consensus 148 n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~---~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~ 220 (401)
...|.+.+ +++..++|++ +|.++|.|++++.... .+.++..++.--+-+..|.++.+.++|.++.++++.+
T Consensus 223 GvgG~v~~p~GYlka~~~~v~k--~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~ 300 (442)
T KOG1404|consen 223 GVGGIVELPPGYLKAAYKVVRK--RGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIAD 300 (442)
T ss_pred cCCccccCCchHHHHHHHHHHH--cCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHH
Confidence 88888864 7899999999 9999999999874332 2455555554344455699988889999999999988
Q ss_pred HhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCcccc
Q 015729 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCT 298 (401)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 298 (401)
-+..... .++.+..++...++-.++++.++++ ++.++..+...+|.+.|.++ ..++..
T Consensus 301 v~~~~~~-----------------~fnTyggnP~a~avg~aVL~Vikee---~LqE~aa~vG~yl~~~l~~l~d~h~iIG 360 (442)
T KOG1404|consen 301 VLNQKSS-----------------HFNTYGGNPVACAVGLAVLKVIKEE---NLQENAAEVGSYLLEKLAALKDKHPIIG 360 (442)
T ss_pred HHHhccc-----------------cccccCCCchhHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHhhcCCcee
Confidence 7765421 2233445555667777888888774 68888899999999999986 677766
Q ss_pred CCCccCCceeEEEEcCCC----C-C----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 299 QKEEWFSDTVTAVIVPSH----I-N----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~----~-~----~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
.-. ..+.++.+++=+. . . ...+-+.+++. |+.|..| ...|+.+||.+.-.+|++|+|.+++..
T Consensus 361 dVR--G~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~-Gvlvg~g--~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 361 DVR--GRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKEL-GVLVGKG--GIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ecc--cceeEEEEEEecccCCCCCcchHHHHHHHHHHHHh-Ceeeecc--cccceEEEecCCeeccHHHHHHHHHHH
Confidence 432 3555666665111 1 1 12355566655 9998444 344779999998899999998877755
No 360
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.76 E-value=7.4e-16 Score=147.97 Aligned_cols=294 Identities=15% Similarity=0.165 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc--CC------C------CCeEEEEcCCcchHHHHHHHHHcC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LS------P------GDRIISFLIGQFSLLWIDQQQRLN 107 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~--~~------~------gd~vl~~~~~~~~~~~~~~~~~~g 107 (401)
....++.++|++....+.-+.+.|+++|++|++.++... .. . +.+|+....+||+.....+.. .|
T Consensus 85 ~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~-~~ 163 (431)
T TIGR03251 85 VAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSL-TN 163 (431)
T ss_pred HHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhc-cC
Confidence 444566666776653222245899999999999988431 11 1 367999999999876332221 11
Q ss_pred Cc-EE----------EEeCC-------CCC-C-------CChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hH
Q 015729 108 FN-VD----------VVESD-------WGE-G-------AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LS 157 (401)
Q Consensus 108 ~~-~~----------~v~~~-------~~~-~-------~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~ 157 (401)
.. .. .++.. ... . -+++++++.+.... +++.++++.......|.+.+ ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~iAavivEPv~g~~G~~~~~~~~l~ 242 (431)
T TIGR03251 164 TDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERP-HDIACFIAEPIQGEGGDNHFRPEFLR 242 (431)
T ss_pred CccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCC-CcEEEEEEeccccCCCCcCCCHHHHH
Confidence 10 00 01110 000 0 02445566665433 57899999999888898763 78
Q ss_pred HHHHHhhhcCCCcEEEEecccc-cCcc----eeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCcccc
Q 015729 158 KVRKLLDEYRHPALFLVDGVSS-ICAI----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (401)
Q Consensus 158 ~i~~l~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~ 232 (401)
+|.++|++ +|+++|+|++++ +|.. .++.....+|+++++ |.+ + ..|++..+ +..+.........
T Consensus 243 ~l~~lc~~--~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~g--K~~--~-~~g~~~~~-~i~~~~~~~~~~~--- 311 (431)
T TIGR03251 243 AMRALCDE--HDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFG--KKT--Q-VCGIMAGR-RVDEVADNVFAVP--- 311 (431)
T ss_pred HHHHHHHH--cCCEEEEecchhccCccchHHHHHhcCCCCCEEEec--ccC--c-cceEEecc-hHHHhhhhcccCc---
Confidence 89999999 999999999987 3321 122223458998876 654 2 23555443 3211111000000
Q ss_pred chHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCceeE
Q 015729 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVT 309 (401)
Q Consensus 233 ~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~ 309 (401)
.. .++ +++.++..+++..++++.+.+++ ..++..++.+++.+.|+++ ... +... ....+.++
T Consensus 312 -------~~-~~~--T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~--vrg~G~~~ 376 (431)
T TIGR03251 312 -------SR-LNS--TWGGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSN--PRGRGLMC 376 (431)
T ss_pred -------cc-cCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceec--ccccceeE
Confidence 00 011 23456677888899999887765 4556666667777777664 232 2221 11235677
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
.+++++......+.+.|+++ ||.+.+. ....+|+++...+|++|+|++++++++
T Consensus 377 ~i~~~~~~~~~~~~~~l~~~-Gvl~~~~----g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 377 AFDLPSTADRDEVIRQLYRE-GVLLLGC----GERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEEeCCHHHHHHHHHHHHhC-CeEEecC----CCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 78875432345688888866 9998643 135799999889999999999999875
No 361
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=1.3e-16 Score=134.39 Aligned_cols=274 Identities=15% Similarity=0.122 Sum_probs=186.0
Q ss_pred ceEEecCChhHHHHHHHhccCCCC-CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCce
Q 015729 61 TPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIK 139 (401)
Q Consensus 61 ~~i~~~~g~t~a~~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~ 139 (401)
+.+.+..|+-+.+.++++..+.|| ++|+...| .+|.+. --+...+++++.++.+++.+++.|++.+.+..+ +++|
T Consensus 87 dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPP-tysMY~-v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~d--s~iK 162 (375)
T KOG0633|consen 87 DNICVGVGSDELIDLIIRCVCDPGKEKILDCPP-TYSMYV-VDAAINDAEVVKVPLNPDFSLNVDAIAEVLELD--SKIK 162 (375)
T ss_pred cceEEecCcHHHHHHHHhheecCCccceeecCC-cceeEE-EEeecCCceEEEecCCCCccccHHHHHHHHhcc--ccce
Confidence 448899999999999999999999 66766655 455541 124557899999999999999999999998765 3799
Q ss_pred EEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc----eeccCcccceEEEecCCCcccCCCcc--eEEE
Q 015729 140 AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI----DFRMDEWGIDVALTGSQKALSLPTGM--GIVC 213 (401)
Q Consensus 140 ~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~di~~~s~~K~l~g~~g~--G~l~ 213 (401)
.++++.|.||||.....+.|.++.+. +.|.++++|+|+--++- ..-..++..-++.-+.+|.+ |..|+ |+-+
T Consensus 163 ~~F~tSPgNPtg~~ik~~di~KiLe~-p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsf-GLAGiRvG~~~ 240 (375)
T KOG0633|consen 163 CIFLTSPGNPTGSIIKEDDILKILEM-PDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSF-GLAGIRVGYGA 240 (375)
T ss_pred EEEEcCCCCCCcccccHHHHHHHHhC-CCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhc-CcceeEeeccc
Confidence 99999999999999999999998884 56899999999753322 11123344567777889988 56664 8888
Q ss_pred ecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHH
Q 015729 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG---LENVIERHRRLGKATRLAVE 290 (401)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g---~~~~~~~~~~~~~~l~~~L~ 290 (401)
.+.++.+.+...+++ .+.+. ++..+|++.+.... ++..+....+.+.++...|.
T Consensus 241 ~~~~ia~iln~~KaP--------------------YNiS~---~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt 297 (375)
T KOG0633|consen 241 FPLSIAEILNRAKAP--------------------YNISV---AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELT 297 (375)
T ss_pred ccHHHHHHHHhccCC--------------------ccccc---hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhh
Confidence 888887766544332 12222 24455555554332 55666666666777777777
Q ss_pred Hc-CCccccCCCccCCceeEEEEcCCCCC--HHHHHHHHHhhCCeEEccC-CCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 291 AW-GLKNCTQKEEWFSDTVTAVIVPSHIN--SSEIVRRAWQRYNLSLGLG-LNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 291 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~L~~~~~i~v~~g-~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
++ ++.-.. .+..++ ++.+++.++-+ +..+...+..++||.|+-. ....-.+++||+ .+ |.|+-+.+++.+
T Consensus 298 ~v~~~~~~~--gg~daN-FiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRit-vG--t~EentvL~k~~ 371 (375)
T KOG0633|consen 298 EVPFLNDYP--GGSDAN-FILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRIT-VG--TPEENTVLMKCL 371 (375)
T ss_pred cCccccCCC--Cccccc-EEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEE-cC--CcccchHHHHHH
Confidence 75 333111 112343 55567743321 2334444555679998744 223235789994 44 677777788777
Q ss_pred HHH
Q 015729 367 EMI 369 (401)
Q Consensus 367 ~~~ 369 (401)
++.
T Consensus 372 K~~ 374 (375)
T KOG0633|consen 372 KQF 374 (375)
T ss_pred Hhh
Confidence 654
No 362
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.75 E-value=8.3e-17 Score=144.48 Aligned_cols=316 Identities=15% Similarity=0.135 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc----cCC----CC-----CeEE-EEcCCcchHHHHHHHHH
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN----TLS----PG-----DRII-SFLIGQFSLLWIDQQQR 105 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~----~~~----~g-----d~vl-~~~~~~~~~~~~~~~~~ 105 (401)
+.-...++..++.++.|++...+-+|++||+-++..++.. .+. .| +-|+ ++..+|+|.. +.+..
T Consensus 139 F~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~--kaAa~ 216 (510)
T KOG0629|consen 139 FVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK--KAAAF 216 (510)
T ss_pred EEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH--HHHHH
Confidence 3334557888889999998754478888888776655422 111 11 2233 3344666654 55555
Q ss_pred cC---CcEEEEeCCCCCCCChHHHHHHHhccC--CCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccccc
Q 015729 106 LN---FNVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI 180 (401)
Q Consensus 106 ~g---~~~~~v~~~~~~~~d~~~le~~~~~~~--~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~ 180 (401)
+| -+++.|++++.+.+++++||+++.+.. +..|..+-.+...+..|...|++.|+++|++ |++|+++|+|.+.
T Consensus 217 lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k--~~lWmHvDAAwGG 294 (510)
T KOG0629|consen 217 LGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEK--HKLWMHVDAAWGG 294 (510)
T ss_pred hccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHh--cCEEEEeeccccc
Confidence 66 489999999999999999999987633 1236666777778889999999999999999 9999999999887
Q ss_pred CcceeccC------cccceEEEecCCCcccCCCcceEEEecHHH-HHHhccCCCCccccchHHHH-------HHhhcCCC
Q 015729 181 CAIDFRMD------EWGIDVALTGSQKALSLPTGMGIVCASPKA-LEASKTAKSVRVFFDWKDYI-------KFYNLGTF 246 (401)
Q Consensus 181 ~~~~~~~~------~~~~di~~~s~~K~l~g~~g~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~ 246 (401)
|.+..... -..++.+.+++||+++.+..|+....+.+- +.++.++.+.+.+.+-+.+. +.+..|+
T Consensus 295 glLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGR- 373 (510)
T KOG0629|consen 295 GLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGR- 373 (510)
T ss_pred ccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCc-
Confidence 65432111 125789999999999888888887776554 56666665544443322222 2333342
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCC----C-H-
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHI----N-S- 319 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~----~-~- 319 (401)
-.++ .-++..++.=...|+++...++.++++++.+.|++. +++.+....+.+.+.-+| .+|..+ . .
T Consensus 374 ---h~D~---FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw-~vp~~lR~~~~~~e 446 (510)
T KOG0629|consen 374 ---HVDV---FKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFW-YVPPSLRGWQENPE 446 (510)
T ss_pred ---cccH---HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeec-cCchHhccCcccch
Confidence 1222 223333333234569999999999999999999998 655544322223332222 233211 1 1
Q ss_pred ---------HHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecc-cCCHHHHHHHHHHHHHH
Q 015729 320 ---------SEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLG-HLNELQLLGCLAGVEMI 369 (401)
Q Consensus 320 ---------~~l~~~L~~~~~i~v~~g~~~~--~~~~~Ri~~~~-~~~~~di~~~~~~i~~~ 369 (401)
..+-.++.++.-.. .++.+. .++.+|..+.+ .++++|+|.+++.|...
T Consensus 447 ~~~rL~kVaPkIK~~Mm~~Gt~M--i~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 447 RDSRLVKVAPKIKERMMKKGTTM--IGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hhhHHHhhCcHHHHHHHhcccee--eEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 12333344442222 223332 34568886655 67899999999998765
No 363
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.75 E-value=1.1e-15 Score=138.13 Aligned_cols=319 Identities=15% Similarity=0.097 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHH---HHHHHhccC-C----CCCeEEEEcCCcchHHHHHHHHHcCCcE
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGA---WESALTNTL-S----PGDRIISFLIGQFSLLWIDQQQRLNFNV 110 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~-~~g~t~a---~~~~~~~~~-~----~gd~vl~~~~~~~~~~~~~~~~~~g~~~ 110 (401)
..+++.+|++.|.++.|.+. +.+ .+.|+++ -.+++.+.. . ..+.+++++..|-.+ . ..+...|.++
T Consensus 107 ~l~li~~Lq~~L~~ITG~Da---vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN-P-ASAam~G~~V 181 (496)
T COG1003 107 YLELIYELQEWLKEITGMDA---VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN-P-ASAAMAGFKV 181 (496)
T ss_pred HHHHHHHHHHHHHHhcCCce---eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC-h-hhHhhcCceE
Confidence 45668899999999999886 433 3344432 223444432 1 235678887754433 2 3467789999
Q ss_pred EEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc-chHHHHHHhhhcCCCcEEEEecccccCcc-eeccC
Q 015729 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-NLSKVRKLLDEYRHPALFLVDGVSSICAI-DFRMD 188 (401)
Q Consensus 111 ~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~-~l~~i~~l~~~~~~~~~li~D~a~~~~~~-~~~~~ 188 (401)
+.|++++++.+|+++|++++.+ ++.++++++|++ .|... ++.+|.++.++ +|..|..|+|---+.+ -....
T Consensus 182 V~V~~~~~G~VDlddLk~k~~~----~~AalMiTnPsT-~GvFE~~I~ei~~ivH~--~Gg~vY~DGANlNA~vG~~rPG 254 (496)
T COG1003 182 VVVKCDENGNVDLDDLRAKAED----NLAALMITNPST-LGVFEEDIREICEIVHE--AGGQVYYDGANLNAIVGLARPG 254 (496)
T ss_pred EEEecCCCCCccHHHHHHHhcc----ceeEEEeccCcc-cccchhhHHHHHHHHHH--cCCEEEecCcchhhhhcccccc
Confidence 9999999999999999999984 568999998765 56665 68999999999 9999999988532111 12445
Q ss_pred cccceEEEecCCCcccCC-----CcceEEEecHHHHHHhccC----CCCccccchHHHHHHhhcCCCCCCCCcHHHHHHH
Q 015729 189 EWGIDVALTGSQKALSLP-----TGMGIVCASPKALEASKTA----KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGL 259 (401)
Q Consensus 189 ~~~~di~~~s~~K~l~g~-----~g~G~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~ 259 (401)
++|+|+.-+..||+|+.| +|.|-+.++..+..-++.. ....+..+.... +.......+.++.+++ .-.
T Consensus 255 d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~-~s~g~~~a~~Gs~~il--~~a 331 (496)
T COG1003 255 DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGK-KSIGVSAAPYGSASIL--PIA 331 (496)
T ss_pred ccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCC-ccceeeccccCcchHH--HHH
Confidence 678999999999999654 6788999987765544431 111101110000 0011111122333332 222
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC-ceeEEEE-c--CCCCCHHHHHHHHHhhCCeEEc
Q 015729 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS-DTVTAVI-V--PSHINSSEIVRRAWQRYNLSLG 335 (401)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~l~~~L~~~~~i~v~ 335 (401)
++=+.....+|+++.-+...-++.|+.+.|+. .+++.-.....+. -.++..+ + ..|++..+++++|.+- |+.-.
T Consensus 332 ~~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~-GfHaP 409 (496)
T COG1003 332 WAYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDY-GFHAP 409 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhc-CCCCC
Confidence 33344455667888889999999999999987 3444322111111 1122222 1 1368899999999975 77643
Q ss_pred cCCCCC-CCcEEEEeecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 336 LGLNKV-AGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 336 ~g~~~~-~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
..+++. -.+.+=|-+....+++++|++++++.++.++...
T Consensus 410 T~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 410 TMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred cccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 334431 2445666666677899999999999999877644
No 364
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.74 E-value=1.1e-15 Score=146.30 Aligned_cols=275 Identities=15% Similarity=0.127 Sum_probs=174.8
Q ss_pred ceEEecCChhHHHHHHHhcc--C-C-----------------------CC---CeEEEEcCCcchHHHHHHHHHc-----
Q 015729 61 TPFLIPTTGTGAWESALTNT--L-S-----------------------PG---DRIISFLIGQFSLLWIDQQQRL----- 106 (401)
Q Consensus 61 ~~i~~~~g~t~a~~~~~~~~--~-~-----------------------~g---d~vl~~~~~~~~~~~~~~~~~~----- 106 (401)
+.+.|++||++|++.++.-. . + +| .+|+....+||+.....+....
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~ 202 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH 202 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 45999999999999988431 1 0 11 2799999999988743332111
Q ss_pred --CC---cEEEEeCCCC-CC-------------CChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHh
Q 015729 107 --NF---NVDVVESDWG-EG-------------AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLL 163 (401)
Q Consensus 107 --g~---~~~~v~~~~~-~~-------------~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~ 163 (401)
+. ....++.+.. .. -+++.+++.+++.. +++.+|++.......|.+.+ ++++.++|
T Consensus 203 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~-~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc 281 (464)
T TIGR00699 203 KLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWH-KPVAAIIVEPIQSEGGDNHASPDFFRKLRDIT 281 (464)
T ss_pred ccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcC-CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 10 1122222210 00 13566788886533 46899999999888899887 89999999
Q ss_pred hhcCCCcEEEEecccccCcc---eeccC--cc--cceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHH
Q 015729 164 DEYRHPALFLVDGVSSICAI---DFRMD--EW--GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (401)
Q Consensus 164 ~~~~~~~~li~D~a~~~~~~---~~~~~--~~--~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~ 236 (401)
++ +|+++|+|+++..... .+..+ .. .+|+++++ |.+++. |++..+ +. +.... .
T Consensus 282 ~~--~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~g--K~lg~g---G~~~~~-~~---~~~~~--~------- 341 (464)
T TIGR00699 282 KK--HNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFS--KKFQTA---GYFFHD-PA---FRPNK--P------- 341 (464)
T ss_pred HH--cCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEeh--hhhccC---Cccccc-hh---ccCCC--C-------
Confidence 99 9999999999863221 11111 22 38887775 988311 333332 21 11100 0
Q ss_pred HHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCceeEEEEc
Q 015729 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTAVIV 313 (401)
Q Consensus 237 ~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~ 313 (401)
+..++ ++..++..+++..++++.+.+++ ..++..+..+++++.|+++ .+. .+..-.....+.++.+++
T Consensus 342 ----~~~~~--T~~gnp~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~ 412 (464)
T TIGR00699 342 ----YRQFN--TWMGDPSRALILREIIQEIKRKD---LLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDT 412 (464)
T ss_pred ----ccccc--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEec
Confidence 00111 33466677788888999887654 6667777788888888875 244 222111002466777887
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 314 PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 314 ~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
++......+.+.++++ |+.+... ..+.+||.+...+|++|+|+++++|++++
T Consensus 413 ~~~~~~~~i~~~~~~~-Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 413 PDEAKRDKLLKKARNN-GVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CCHHHHHHHHHHHHHC-CcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 5422256788888876 9988643 23689999998999999999999998763
No 365
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=3.8e-15 Score=133.74 Aligned_cols=338 Identities=16% Similarity=0.122 Sum_probs=205.7
Q ss_pred CCCCCCCcccccCCCcCChHHHHHHHccCcCCC----CCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
|.++...-..-+.|+. .|++.+++.+..... ..+...+ .-++.+.+.+.++....+.+.|+++||+|++.++.
T Consensus 58 yiD~~ssw~~~~~Gha--npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK 134 (433)
T KOG1401|consen 58 YIDFTSSWAVTILGHA--NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGKGSAERVFFCNSGTEANETALK 134 (433)
T ss_pred eeeeccceeccccCCC--CHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHH
Confidence 4444554444455555 888999998865432 1222223 66788888888877777789999999999999883
Q ss_pred c---cC---CCCC--eEEEEcCCcchHHHHHHHHHcCCcE----------EEEeCCCCCCCChHHHHHHHhccCCCCceE
Q 015729 79 N---TL---SPGD--RIISFLIGQFSLLWIDQQQRLNFNV----------DVVESDWGEGAKLDVLASKLAADTAHTIKA 140 (401)
Q Consensus 79 ~---~~---~~gd--~vl~~~~~~~~~~~~~~~~~~g~~~----------~~v~~~~~~~~d~~~le~~~~~~~~~~~~~ 140 (401)
. +. .+.+ +++...++||+.....+.. .+... .++...++ |..++++.+.... ..+.+
T Consensus 135 ~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~-~~~s~y~~~~~p~~p~v~~~~yn---d~t~l~k~~~~h~-~~IaA 209 (433)
T KOG1401|consen 135 FARKFTGKKHPEKKTKFIAFENSYHGRTLGALSV-TGNSKYGLPFDPIAPDVVTAEYN---DSTALEKLFESHK-GEIAA 209 (433)
T ss_pred HHHHhhcccCCccceeEEEEecCcCCcchhHHHh-hcccccCCCCCCCCCceeecccC---CHHHHHHHHHhCC-CceEE
Confidence 2 11 1222 4999999999876433321 12211 22222222 7899999998754 35899
Q ss_pred EEEEecCCCcccccc----hHHHHHHhhhcCCCcEEEEecccccCcc-ee----ccCcccceEEEecCCCcccCCCcceE
Q 015729 141 ICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI-DF----RMDEWGIDVALTGSQKALSLPTGMGI 211 (401)
Q Consensus 141 i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~li~D~a~~~~~~-~~----~~~~~~~di~~~s~~K~l~g~~g~G~ 211 (401)
+++.......|..+. +..+++.|++ +|+++|.|+.+..... -. ..-...+||++.. |.++|+.++|.
T Consensus 210 VIvEPiqGaGG~~p~~peFl~~L~k~C~~--~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA 285 (433)
T KOG1401|consen 210 VIVEPIQGAGGIIPADPEFLIGLRKECDD--NGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGA 285 (433)
T ss_pred EEEecccCCCCcccCCHHHHHHHHHHHhh--cCceEEeehhhhCccccchHHHHHHhCcCCcceeeh--hhccCCceeEE
Confidence 999999988888874 5679999999 9999999999874221 11 1112347877765 99988888999
Q ss_pred EEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 015729 212 VCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA 291 (401)
Q Consensus 212 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (401)
..++++..+.+.+... +..|+ .++-+++.+.+...+++.+.+. ..+++..+..+.|++.+.+
T Consensus 286 ~~v~~kV~~~i~~~~~-------------l~hg~--Tf~gnpLacsa~~~~l~~l~~~---e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 286 TGVRDKVAEMISPGDH-------------LYHGG--TFSGNPLACSAGIKVLDELKDP---ETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred EeehHHHHhhcCCCCc-------------cccCc--ccCCChhhhhHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHH
Confidence 9999999998876432 11243 3344556666777788877764 3556666666666666666
Q ss_pred cCCccccC-CCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEee--c--ccCCHHHHHHHHHHH
Q 015729 292 WGLKNCTQ-KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH--L--GHLNELQLLGCLAGV 366 (401)
Q Consensus 292 ~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~--~--~~~~~~di~~~~~~i 366 (401)
...+.... .....++.++.+.+... ...+....++. +..+..+........+|+.+ . ...+.|+++++++++
T Consensus 348 ~~~~~~~~i~g~~grgl~ig~~~~~p--~~~~~d~~~~~-~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~ 424 (433)
T KOG1401|consen 348 YLKKTPNSICGGVGRGLVIGFEFEGP--VYKFADAAREQ-GLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTIL 424 (433)
T ss_pred HhccCCCceeeeeeeEEEEEEEEeec--hhhhhhhhhhh-hHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHH
Confidence 31111111 11123444555544211 11111111111 11111111001112344443 1 123588999999999
Q ss_pred HHHHHhc
Q 015729 367 EMILKDV 373 (401)
Q Consensus 367 ~~~l~~~ 373 (401)
.+++.++
T Consensus 425 ~~~l~~~ 431 (433)
T KOG1401|consen 425 EKVLSAL 431 (433)
T ss_pred HHHHHHh
Confidence 9998765
No 366
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.73 E-value=3.7e-15 Score=128.17 Aligned_cols=293 Identities=13% Similarity=0.087 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhcc---CCCC--CeEEEE-cCCcchHHHHHHHHHcCCcEEE
Q 015729 40 VPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNT---LSPG--DRIISF-LIGQFSLLWIDQQQRLNFNVDV 112 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~---~~~g--d~vl~~-~~~~~~~~~~~~~~~~g~~~~~ 112 (401)
...++..+...+.+-+|+. .++++.+|+|+..|...+..-+ ...| ++|+.+ .|+|.++. ...-. .-.+
T Consensus 76 ~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~--d~~l~---~d~f 150 (417)
T COG3977 76 KAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA--DAGLE---EDLF 150 (417)
T ss_pred hhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccc--ccccC---ccce
Confidence 4456778888888888886 4466999999888877654222 2234 345554 45555443 11111 1111
Q ss_pred EeC------CCC----CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccc
Q 015729 113 VES------DWG----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 113 v~~------~~~----~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
|.. .+. .++|.+.++- . +++.+|.++-|.||||.+.. +.++.+++++ ||+++|+|.|++
T Consensus 151 Vs~kP~iel~~~g~FKY~vDF~~l~i--~----e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~--~giPliIDnAYg 222 (417)
T COG3977 151 VSAKPNIELLPAGQFKYHVDFEHLHI--G----ESTGAICVSRPTNPTGNVLTDEELAKLDALARQ--HGIPLIIDNAYG 222 (417)
T ss_pred eeccCCcccccccceeeccCHHHccc--c----cccceEEecCCCCCCCCcccHHHHHHHHHHhhh--cCCcEEEecccC
Confidence 221 112 3457766552 3 46789999999999999985 5566777888 999999999988
Q ss_pred cCcceeccCc----cc-ceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHH
Q 015729 180 ICAIDFRMDE----WG-IDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (401)
Q Consensus 180 ~~~~~~~~~~----~~-~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 254 (401)
......-+.+ |+ .-+.+.|.+|.-..+..||+++.+++++..+..+..--. +..|. ...
T Consensus 223 ~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~iis----------Lap~~-----~G~- 286 (417)
T COG3977 223 VPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGIIS----------LAPGR-----MGP- 286 (417)
T ss_pred CCCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccceee----------ecCCC-----ccH-
Confidence 6533322222 33 357788999943223457999999999887765532100 11111 111
Q ss_pred HHHHHHHHHHHHHHhcHH-----HHHHHHHHHHHHHHHHHHH-c---CCccccCCCccCCceeEEEEcCC-CCCHHHHHH
Q 015729 255 LLYGLRAALDLIFEEGLE-----NVIERHRRLGKATRLAVEA-W---GLKNCTQKEEWFSDTVTAVIVPS-HINSSEIVR 324 (401)
Q Consensus 255 ~~~a~~~al~~~~~~g~~-----~~~~~~~~~~~~l~~~L~~-~---g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 324 (401)
+-+. +.+++..+. -++--++...+...+.|++ + .+.+..+++ ..+.|+.+.+ .++..++.+
T Consensus 287 --Aia~---~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEG----AIFlWLWf~dLPItt~~LYq 357 (417)
T COG3977 287 --AIAA---EMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEG----AIFLWLWFKDLPITTEELYQ 357 (417)
T ss_pred --HHHH---HHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCc----ceeehhhhccCCCCHHHHHH
Confidence 1111 222221111 1222344555555555554 3 444444432 2455555532 467889999
Q ss_pred HHHhhCCeEEccCCCCC---------CCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 325 RAWQRYNLSLGLGLNKV---------AGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 325 ~L~~~~~i~v~~g~~~~---------~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
+|+.+ |+.+.||...+ ...++|++... +++.+++.+.+|.+..+++
T Consensus 358 ~LKa~-Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~--~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 358 RLKAR-GVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred HHHhC-eEEEecccccCCCCCCCCCCccceEEEecCC--CHHHHHHHHHHHHHHHHHH
Confidence 99876 99999995422 34569998877 8899999999998877653
No 367
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.73 E-value=3.8e-15 Score=138.70 Aligned_cols=299 Identities=13% Similarity=0.072 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---CCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEe
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVE 114 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~ 114 (401)
..+.+-|++.+++++.|.+-.. ..+..++|.+-++++.+. -++.++|+++...|+.+. ....+...|++++.++
T Consensus 108 ~Lq~lfe~Qs~i~eLTGmdvaN-aSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~ 186 (429)
T PF02347_consen 108 RLQALFEYQSMICELTGMDVAN-ASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP 186 (429)
T ss_dssp HHHHHHHHHHHHHHHHTSSEE--SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred HHHHHHHHHHHHHHhhCCCccC-CCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence 3455779999999999998432 456778887777655432 233468999998887765 3345666899999999
Q ss_pred CCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC-cceeccCcccce
Q 015729 115 SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC-AIDFRMDEWGID 193 (401)
Q Consensus 115 ~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~-~~~~~~~~~~~d 193 (401)
.+.++..| + +++.++++.+|+ ..|.+.++++|.+++|+ +|.++++ .+-... ..-..+.++|+|
T Consensus 187 ~~~~~~~d--------~----~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~--~gal~~~-~ad~~aL~~l~~Pge~GAD 250 (429)
T PF02347_consen 187 LDEDGTTD--------D----DDTAAVMVQNPN-TFGVFEDIKEIADIAHA--AGALVIV-GADPNALGGLKSPGEYGAD 250 (429)
T ss_dssp BBTTCSB---------S----TTEEEEEEESS--TTSB--THHHHHHHHHH--TT-EEEE-CGGCCGCCTC--GGGGT-S
T ss_pred ccccCCcc--------c----cCeEEEEeecCC-CCceEeeHHHHHHHHHH--cCCEEEE-ecCHHHHhCcCChhhcCcc
Confidence 88776555 2 467888888775 68999999999999999 9999887 543211 122345678999
Q ss_pred EEEecCCCcccCC-----CcceEEEecHHHHHHhccCCCC---------cc--ccchHHHHHHhhcCCCCCCCCcHHHHH
Q 015729 194 VALTGSQKALSLP-----TGMGIVCASPKALEASKTAKSV---------RV--FFDWKDYIKFYNLGTFWPYTPSIQLLY 257 (401)
Q Consensus 194 i~~~s~~K~l~g~-----~g~G~l~~~~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~ 257 (401)
|++.+ +|.|+.| +++|++.+++++.+.++..... .+ ..+-.++..+.++.+++..|...+...
T Consensus 251 I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~ 329 (429)
T PF02347_consen 251 IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLAL 329 (429)
T ss_dssp EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHH
T ss_pred EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHH
Confidence 99666 7777543 5689999999988887765421 11 122345566667776444444443333
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEcc
Q 015729 258 GLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL 336 (401)
Q Consensus 258 a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~ 336 (401)
.+..=+..+-.+|++++.++...++.++++.|.+. +..+. ... ....++ ... ......++.++.... |+...
T Consensus 330 ~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~--~~~-f~e~v~-~~~-~~~~~~~l~~~~~~~-gl~~~- 402 (429)
T PF02347_consen 330 AAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD--NPF-FFEFVV-VFS-KDKEVEELLKRGIEG-GLNLR- 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS--SSS-BSSEEE-EES-S-HHHHHHHHTT-----EEEG-
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC--CCC-ceeeee-ecC-CcHHHHHHHHHHHhc-CCCcc-
Confidence 33333345567789999999999999999999986 33322 222 222222 222 221222333333322 43332
Q ss_pred CCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 337 GLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 337 g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
....+.+-+++....|++|||.+++++
T Consensus 403 ---~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 403 ---YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ---GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ---ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 223447888888889999999999864
No 368
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.72 E-value=4.5e-15 Score=128.04 Aligned_cols=354 Identities=15% Similarity=0.115 Sum_probs=240.1
Q ss_pred CcccccCCCcCChHHHHHHHccCc--------CCC-CC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHh
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNN--------EDY-RS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~--------~~~-~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~ 78 (401)
..|+.+..=...|+.+.+.+.... ..| .+ ..+...-.-+...++.+.|....+ +.+.++-|.-+...+.
T Consensus 68 ~iYlcGNSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~E-vavmNsLTvNlh~Ll~ 146 (465)
T KOG3846|consen 68 VIYLCGNSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENE-VAVMNSLTVNLHSLLI 146 (465)
T ss_pred eEEEeccccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchh-hhhHhhhhhHHHHHHH
Confidence 455555555556665555444421 112 11 223333445667788999998755 8888999988998888
Q ss_pred ccCCCCC---eEEEEcCCcchHH--HHHHHHHcCCcEE----EEeCCCC-CCCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 79 NTLSPGD---RIISFLIGQFSLL--WIDQQQRLNFNVD----VVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 79 ~~~~~gd---~vl~~~~~~~~~~--~~~~~~~~g~~~~----~v~~~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
++.+|.. +|+...-.++|-+ ....++.-|+++. .++..++ ..+.-+++-+.+.++. +.+.+++++.++.
T Consensus 147 sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng-DeiA~v~fSGvqy 225 (465)
T KOG3846|consen 147 SFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG-DEIALVCFSGVQY 225 (465)
T ss_pred HhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC-CeEEEEEeeccee
Confidence 9988764 4666665555544 3456676776432 2222221 2344566666676665 5789999999999
Q ss_pred CcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCC-cceEEEecHHHHHHhccCCC
Q 015729 149 ATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKS 227 (401)
Q Consensus 149 ~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~-g~G~l~~~~~~~~~~~~~~~ 227 (401)
.||...++.+|...-+. .|+++=.|-||+.|..+.....||+|+.+++++|++++++ |+|-+++..+......+...
T Consensus 226 YTGQ~Fdi~aIT~Agq~--kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~ 303 (465)
T KOG3846|consen 226 YTGQYFDIGAITFAGQF--KGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLA 303 (465)
T ss_pred ecccccchhhhhhcccC--CCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHh
Confidence 99999999999966666 8999999999999999999999999999999999998776 46777777776554444333
Q ss_pred CccccchHH---HHHHhh--cC--CCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCc----
Q 015729 228 VRVFFDWKD---YIKFYN--LG--TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLK---- 295 (401)
Q Consensus 228 ~~~~~~~~~---~~~~~~--~g--~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~---- 295 (401)
..+..+... +.+.++ .| .+-..+|++....++...++.+.+..+++.+++..-+..|+-..++.. |.+
T Consensus 304 GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~r 383 (465)
T KOG3846|consen 304 GWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLR 383 (465)
T ss_pred hhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhh
Confidence 222222111 011111 11 133557999999999999999998878888888888888887777664 433
Q ss_pred -------cccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecc-cCCHHHHHHHHHHHH
Q 015729 296 -------NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNELQLLGCLAGVE 367 (401)
Q Consensus 296 -------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~-~~~~~di~~~~~~i~ 367 (401)
+..+......+--+.+.+.. +...+.+.|.++ |+.+. ...++.+|+.+.. +++-.|+..+++++.
T Consensus 384 t~Kl~~~IiTP~~~~erGcQLsl~Fss--p~~~vfqeL~kr-Gv~~D----kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~ 456 (465)
T KOG3846|consen 384 TEKLFFTIITPTSTDERGCQLSLYFSS--PTPKVFQELHKR-GVIGD----KRRPNVIRVAPVPLYNTFSDVYIFVNALN 456 (465)
T ss_pred hcceeEEEeCCcccccccceEEEEeCC--CchHHHHHHHHc-Ceecc----ccCCCceEeecchhhccHHHHHHHHHHHH
Confidence 22222111223344455522 446788888765 88753 3456789998755 889999999999999
Q ss_pred HHHHhc
Q 015729 368 MILKDV 373 (401)
Q Consensus 368 ~~l~~~ 373 (401)
+++..+
T Consensus 457 e~~d~~ 462 (465)
T KOG3846|consen 457 EAMDKL 462 (465)
T ss_pred HHHHHh
Confidence 998754
No 369
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.70 E-value=1.4e-14 Score=137.44 Aligned_cols=301 Identities=15% Similarity=0.104 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC---
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--- 118 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--- 118 (401)
..+.|.++..|+.+|.+.. ..+++|+|.|+..++.+.+++||.|++.-++|-|..-+ .-..|+.++++....+
T Consensus 70 G~i~eAqe~aA~~fgAd~t--yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~g--lilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 70 GPIKEAQELAARVFGADHT--YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHG--LILAGATPVYLEPSRNPLY 145 (557)
T ss_pred ccHHHHHHHHHHHhCCCce--EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHH--HHHcCCceEEecCCCCccc
Confidence 4478999999999999874 57789999999999999999999999999998887632 5567998988876443
Q ss_pred ---CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcc-----eeccCcc
Q 015729 119 ---EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEW 190 (401)
Q Consensus 119 ---~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~ 190 (401)
+.++.+.+++.+.+.+..+ |+++++++ +..|.++++++|++++++ .+.|+.+|++|....- +-...+.
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~-k~~vitnp-TYdGv~~n~~~i~~~~~~--~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAE-KLAVITNP-TYDGVCYNLRKIVELLHH--YGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhh-eeEEEecC-ccceEeecHHHHHHHHhh--cCceEEhhhcCcccccccccCcchhhhc
Confidence 4679999999887654211 56666654 668999999999999999 9999999999874321 1122235
Q ss_pred cceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhc
Q 015729 191 GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG 270 (401)
Q Consensus 191 ~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g 270 (401)
+.|+++-|.||.+++....+.+.+++. . ..+.......+.. ..+.+|+...++++..|-......|
T Consensus 222 ~~~~~tqS~HK~l~alSQaS~iHv~~~--~----------~~~~~r~nea~~~--h~STSPsY~l~ASlD~Ar~~~~~~G 287 (557)
T COG1982 222 GADFVTQSTHKLLAALSQASMIHVKDG--R----------AVNHERFNEALMM--HQSTSPSYPLMASLDVARMQEGNAG 287 (557)
T ss_pred CceEEEechhhhhhhhhhhHHHhhCCC--c----------cCCHHHHHHHHHH--HccCCchHHHHHHHHHHHHhhhhhh
Confidence 789999999999987776677777653 0 0111111111211 1133577777777777555544445
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHc-CCccccCCC---c--------------cCCceeEEEEcC-CCCCHHHHHHHHHh
Q 015729 271 ---LENVIERHRRLGKATRLAVEAW-GLKNCTQKE---E--------------WFSDTVTAVIVP-SHINSSEIVRRAWQ 328 (401)
Q Consensus 271 ---~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~--------------~~~~~~~~~~~~-~~~~~~~l~~~L~~ 328 (401)
++.......+.++.+++...+. +++++.+.. . ...+.-+.+..| .|+++..++++|++
T Consensus 288 ~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e 367 (557)
T COG1982 288 RELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLRE 367 (557)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHH
Confidence 2233566667777777777776 566655431 0 012334445544 57899999999988
Q ss_pred hCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 329 ~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
+ ||........ ...+-+++....+..+++.+++..+
T Consensus 368 ~-gii~e~~~d~--~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 368 H-GIIPEETGDY--SNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred c-CCeeeecCCc--eeeEEeeeccchHHHHHHHHHHHHH
Confidence 7 6654433221 2334444332345566666666555
No 370
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.69 E-value=1.9e-14 Score=145.83 Aligned_cols=326 Identities=15% Similarity=0.022 Sum_probs=205.4
Q ss_pred ChHHHHHHHccCcCCCCCc----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc---C----C------
Q 015729 20 IPDQVIRAMNRNNEDYRSP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---L----S------ 82 (401)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~----~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~---~----~------ 82 (401)
..|++.+++.++....... ...+...+|-++|.+..+.+.-..++|++||++|++.++.-. . .
T Consensus 383 ~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~ 462 (817)
T PLN02974 383 LQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSG 462 (817)
T ss_pred CCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 4677777777755432111 123445567777777433221246999999999999987321 1 1
Q ss_pred --------CCCeEEEEcCCcchHHHHHHHHHcCC---------c-----EEEEeCC--------------CCC-------
Q 015729 83 --------PGDRIISFLIGQFSLLWIDQQQRLNF---------N-----VDVVESD--------------WGE------- 119 (401)
Q Consensus 83 --------~gd~vl~~~~~~~~~~~~~~~~~~g~---------~-----~~~v~~~--------------~~~------- 119 (401)
...+|+....+||+.....+.- .+. . ..+++.+ ...
T Consensus 463 ~~~~~~~~~r~kIIa~~gsYHG~T~GAms~-sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~ 541 (817)
T PLN02974 463 NEKRGGDLIELKVLALDGSYHGDTLGAMEA-QAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGE 541 (817)
T ss_pred cccccccCCCCEEEEECCCcCCCCHHHHhh-CCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccc
Confidence 1346899999999876432221 110 0 0011100 000
Q ss_pred ---------CCC------------hHHHHHHHhc----cCCCCceEEEEEec-CCCcccccc----hHHHHHHhhhcCCC
Q 015729 120 ---------GAK------------LDVLASKLAA----DTAHTIKAICIVHN-ETATGVTNN----LSKVRKLLDEYRHP 169 (401)
Q Consensus 120 ---------~~d------------~~~le~~~~~----~~~~~~~~i~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~ 169 (401)
.+| .+.+++.+++ ...+++.++++... +...|++.+ ++.+.++|++ +|
T Consensus 542 ~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~--~g 619 (817)
T PLN02974 542 ETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRS--RK 619 (817)
T ss_pred ccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHH--hC
Confidence 001 2456676653 12257889999984 677788875 6889999999 99
Q ss_pred cEEEEecccccCcc---ee--ccCcccceEEEecCCCcccCC-CcceEEEecHHHHHHhccCCCCccccchHHHHHHhhc
Q 015729 170 ALFLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (401)
Q Consensus 170 ~~li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (401)
+++|.||+...... .+ +.....+|+++++ |.+.|+ .++|.+.+++++.+.+....... .+.-
T Consensus 620 ilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~I~~~f~~~~~~~----------~~~h 687 (817)
T PLN02974 620 IPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATEEVFEAFRGPSKLD----------ALLH 687 (817)
T ss_pred CEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcHHHHHhhccccccC----------Cccc
Confidence 99999999874321 12 2223347888887 999877 47999999999988775211000 0111
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHH-Hc-CCccccCCCccCCceeEEEEcCCCC---
Q 015729 244 GTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVE-AW-GLKNCTQKEEWFSDTVTAVIVPSHI--- 317 (401)
Q Consensus 244 g~~~~~~~~~~~~~a~~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~--- 317 (401)
|+ +++.++..+++..++|+.+.+++ .++..++..+..+++.+.|. .+ ..+.+. +....+.++.+++.+..
T Consensus 688 g~--Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~--~VRg~Gl~~~iel~~~~~~~ 763 (817)
T PLN02974 688 GH--SYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVE--RVVSLGTVLALELDAEGSGS 763 (817)
T ss_pred CC--CCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCee--EEEeeeeEEEEEEecCCccc
Confidence 32 45677788899999999998765 44556666666677776663 33 333322 12245677778773211
Q ss_pred --C---HHHHHHHHH-hhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHH
Q 015729 318 --N---SSEIVRRAW-QRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMIL 370 (401)
Q Consensus 318 --~---~~~l~~~L~-~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l 370 (401)
+ +..+.+.++ ++ ||.+++. ++.+++.+...+++++++++++++.+.|
T Consensus 764 ~~~~~~a~~v~~~~~~~~-Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 764 GYSSLYARSVVRRLRRED-GIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred ccchHHHHHHHHHHHHhC-CEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 1 245777777 55 9998753 5789987778899999999999998865
No 371
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.69 E-value=2.4e-14 Score=127.53 Aligned_cols=274 Identities=14% Similarity=0.149 Sum_probs=163.1
Q ss_pred HHHHHHHccCcCC------CCCccHHHH-HHHHHHHHHHHhcCCCCceEEe--cCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 22 DQVIRAMNRNNED------YRSPAVPAL-TKTLLEDIKKIFKTTSGTPFLI--PTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 22 ~~v~~a~~~~~~~------~~~~~~~~~-~~~l~~~la~~~g~~~~~~i~~--~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
.+|++|+++.... ..+|++.+. .+.+++-.++.+|.+.. ++- -.|||+|+..++.++++|||+++..+-
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~A--LVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG 104 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDA--LVRPQFVSGTHAIALALFGVLRPGDELLSITG 104 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEE--EEETTS-SHHHHHHHHHHHH--TT-EEEESSS
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhh--hhcccccchHHHHHHHHHhcCCCCCeEEEcCC
Confidence 4678888874321 234555554 55677777999999853 111 348999999999999999999887654
Q ss_pred CcchHHHHH----------HHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCC----cccccchHH
Q 015729 93 GQFSLLWID----------QQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETA----TGVTNNLSK 158 (401)
Q Consensus 93 ~~~~~~~~~----------~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~----tG~~~~l~~ 158 (401)
..+-. ... .....|+++..|++.+++.+|.+.++++++. ++|++++--.-.. +=.+.++++
T Consensus 105 ~PYDT-L~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~----~tk~v~IQRSrGYs~R~sl~i~~I~~ 179 (403)
T PF06838_consen 105 KPYDT-LEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKP----NTKMVLIQRSRGYSWRPSLTIEEIKE 179 (403)
T ss_dssp S--CC-HHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHT----TEEEEEEE-S-TTSSS----HHHHHH
T ss_pred Cchhh-HHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhcc----CceEEEEecCCCCCCCCCCCHHHHHH
Confidence 21211 111 1245789999999999999999999999984 5688887743211 112224666
Q ss_pred HHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCC--CcceEEEecHHHHHHhccCC-CCccccchH
Q 015729 159 VRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP--TGMGIVCASPKALEASKTAK-SVRVFFDWK 235 (401)
Q Consensus 159 i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~--~g~G~l~~~~~~~~~~~~~~-~~~~~~~~~ 235 (401)
+.+++|+.+.++++.+|.+|+-+.........|+|++.+|.-|..+|+ +.-|+++.+++++++..... +++
T Consensus 180 ~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPG------ 253 (403)
T PF06838_consen 180 IIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPG------ 253 (403)
T ss_dssp HHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TT------
T ss_pred HHHHHHhhCCCeEEEEeCCcceeccccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCc------
Confidence 777777778999999999999877777777889999999999999765 22399999999988764321 111
Q ss_pred HHHHHhhcCCCCCCCCcHHHHHHHHHHHH-HHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcC
Q 015729 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALD-LIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 236 ~~~~~~~~g~~~~~~~~~~~~~a~~~al~-~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (401)
..-+.|. |.... ...++ ++.. .....+..+-+......++++|+++.+.....++..+-.+.+.
T Consensus 254 ---iG~e~G~----t~~~~-----R~~~QGlFlA---P~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~ 318 (403)
T PF06838_consen 254 ---IGKEVGA----TLGTN-----RLMFQGLFLA---PHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELG 318 (403)
T ss_dssp ---TGGGSS------TTTH-----HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-S
T ss_pred ---ccccccc----CcchH-----HHHHhHHhhc---hHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECC
Confidence 1112232 22221 11121 2222 2455666666677777888899999887666678888889884
Q ss_pred CCCCHHHHHHHH
Q 015729 315 SHINSSEIVRRA 326 (401)
Q Consensus 315 ~~~~~~~l~~~L 326 (401)
+.+.+...|
T Consensus 319 ---~~e~l~~FC 327 (403)
T PF06838_consen 319 ---SPEKLIAFC 327 (403)
T ss_dssp ---SHHHHHHHH
T ss_pred ---CHHHHHHHH
Confidence 345444444
No 372
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.69 E-value=4e-14 Score=128.17 Aligned_cols=324 Identities=16% Similarity=0.143 Sum_probs=214.2
Q ss_pred CcCChHHHHHHHccCcCCC-----CCccH----HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CC--CC
Q 015729 17 PVHIPDQVIRAMNRNNEDY-----RSPAV----PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LS--PG 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~-----~~~~~----~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~--~g 84 (401)
+..+|+.|...+.+..... ++++. .+..-+++..++++.|.+-.. ....-++|.+-++++.+. +. +.
T Consensus 86 ~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VAN-ASm~DeaTAaAEAm~ma~r~~k~k~ 164 (450)
T COG0403 86 DTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVAN-ASMLDEATAAAEAMLMAKRVTKKKR 164 (450)
T ss_pred CCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCccc-chhhhhHHHHHHHHHHHHHhhcCcC
Confidence 5556666654666643322 12222 233568999999999998443 556778888888777553 22 35
Q ss_pred CeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcc-cccchHHHHH
Q 015729 85 DRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG-VTNNLSKVRK 161 (401)
Q Consensus 85 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG-~~~~l~~i~~ 161 (401)
++++++...|+... ....++..|.+++.++.+ |.+++++. +. ..+..+++.+|+ ..| ...++.+|.+
T Consensus 165 ~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~---~~~~gv~vQyP~-~~G~~~~d~~~l~~ 234 (450)
T COG0403 165 NKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DD---GDVFGVLVQYPN-TFGIVEEDLRALIE 234 (450)
T ss_pred ceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cc---cCeEEEEEecCC-CCCccchhHHHHHH
Confidence 78999999888775 445667778888888766 78888887 43 245677777765 577 6667999999
Q ss_pred HhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCccc-----CCCcceEEEecHHHHHHhccCCCC--------
Q 015729 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALS-----LPTGMGIVCASPKALEASKTAKSV-------- 228 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~-----g~~g~G~l~~~~~~~~~~~~~~~~-------- 228 (401)
.+|. ++.++++=.---...+-....++|+||++++.+- |+ |++.+|++.+++++.++.+.+...
T Consensus 235 ~~h~--~~al~~v~aDplaL~LL~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~ 311 (450)
T COG0403 235 AAHS--AGALVIVAADPLALGLLKPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGK 311 (450)
T ss_pred HHhh--cCCEEEEEechhHhhccCCccccCCceEEecCcc-cCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCC
Confidence 9999 8887776432222223334567899999999886 32 335579999999998888776531
Q ss_pred ---ccccchHHHHHHhhcCCCCCCCCcHHH---HHHHHHHHH--HHHHhcHHHHHHHHHHHHHHHHHHHHHc--CCcccc
Q 015729 229 ---RVFFDWKDYIKFYNLGTFWPYTPSIQL---LYGLRAALD--LIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCT 298 (401)
Q Consensus 229 ---~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~a~~~al~--~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 298 (401)
....+-.+++.+.++.+ ++++. +.++.+++- ++..+|++++.++..+++.+++++|.+. |+++..
T Consensus 312 ~A~rLaLQTREQHIRReKAT-----SNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~ 386 (450)
T COG0403 312 RAFRLALQTREQHIRREKAT-----SNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVF 386 (450)
T ss_pred chhhhhHHHHHHHHhhhccc-----hhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecc
Confidence 11234456677777776 44432 333333332 3346789999999999999999999975 577765
Q ss_pred CCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
. . +-+ -+.++++. .....+..+... .|+-++.-. ...+-+++....+++||+.+++++...
T Consensus 387 ~--~-fFd-t~~v~~~~-~~~~~l~~~~~~-~G~~L~~~~----~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 387 D--H-FFD-TFTVRVPE-EVAEALLAAAIA-GGINLRRVD----ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred c--c-cee-eEEEecch-hHHHHHHHHHHh-cCCceeeec----CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 3 2 222 23466643 123444444432 366654332 336778777788899999999988754
No 373
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.69 E-value=9.1e-15 Score=140.47 Aligned_cols=291 Identities=15% Similarity=0.126 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEE-cCCcchHH-HHH--HHHHcCCc----EEEE
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISF-LIGQFSLL-WID--QQQRLNFN----VDVV 113 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~-~~~~~~~~-~~~--~~~~~g~~----~~~v 113 (401)
..++.++|.+++.. .+.+.|+++|++|++.++.. ......+|+.. ..++++.. +.. .....+.. ...+
T Consensus 90 ~~~la~~l~~~~p~--~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~ 167 (431)
T PRK06209 90 ELDAAESFLELIDG--ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV 167 (431)
T ss_pred HHHHHHHHHHhCCc--cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc
Confidence 34677778777642 23599999999999998843 22323455554 33343311 100 00001110 0011
Q ss_pred eCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCccee-ccC---c
Q 015729 114 ESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-RMD---E 189 (401)
Q Consensus 114 ~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~-~~~---~ 189 (401)
.+..+ |++++++.+++.. +++.+|++.......+....+++|.++|++ +|+++|+|++|....... ... .
T Consensus 168 ~~~~~---d~~~l~~~l~~~~-~~~aavi~Epv~g~~~~~~~l~~l~~lc~~--~g~lLI~DEv~tG~~~~~~g~~~~~g 241 (431)
T PRK06209 168 TFRYN---DIASLEALFEDHP-GRIACVILEPATADEPQDGFLHEVRRLCHE--NGALFILDEMITGFRWHMRGAQKLYG 241 (431)
T ss_pred ccCCC---CHHHHHHHHHhCC-CCEEEEEEccccCCCCCHHHHHHHHHHHHH--cCCEEEEEcccccCCcCcchhhHHhC
Confidence 11221 7899999887533 357777877654432222248999999999 999999999985322110 111 2
Q ss_pred ccceEEEecCCCcccCCCcceEEEecHHHHHH--hccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHH
Q 015729 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEA--SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF 267 (401)
Q Consensus 190 ~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~ 267 (401)
..+|++++ .|.++++.++|.+++++++.+. +........ +.-++ ++++++..+++..++++.+.
T Consensus 242 v~PDi~t~--gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~----------~~~~~--T~~~np~~~aaa~a~l~~i~ 307 (431)
T PRK06209 242 IVPDLSCF--GKALGNGFAVSALAGKREYMELGGLEHTDRERV----------FLLST--THGAETHALAAAIATMAIYR 307 (431)
T ss_pred CCcceeee--hhhhcCCcccEEEEEHHHHHhhhcccccCCCCc----------eeecc--CCCCCHHHHHHHHHHHHHHh
Confidence 24677665 4999876667999999988765 211100000 00011 34566677889999999987
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEc--CCCCCHH----HHHHHHHhhCCeEEccC
Q 015729 268 EEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIV--PSHINSS----EIVRRAWQRYNLSLGLG 337 (401)
Q Consensus 268 ~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~l~~~L~~~~~i~v~~g 337 (401)
+++ ..++..++.+++++.|+++ ++....... .....+.+.. +.+.+.. .+.+.|.++ ||.+.
T Consensus 308 ~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~--G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~p-- 379 (431)
T PRK06209 308 DED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVRVS--GRPCCLTYSTLDGNGQPSQAFRTLFLQETIRR-GVLMP-- 379 (431)
T ss_pred ccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEee--cceEEEEEecCCcccCCcHHHHHHHHHHHHHC-Ccccc--
Confidence 754 5666777777777777653 322211100 1111111111 1111112 456667666 88652
Q ss_pred CCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 338 LNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 338 ~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.++++ ..+|++||++++++++++++++
T Consensus 380 -------~l~is--~~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 380 -------SLVVS--YAHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred -------ccccc--ccCCHHHHHHHHHHHHHHHHHH
Confidence 23444 5689999999999999999875
No 374
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.68 E-value=1.2e-13 Score=123.94 Aligned_cols=299 Identities=13% Similarity=0.088 Sum_probs=168.5
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHH-HHH-hc----cCC--------CCCeEEEEcCCcchHHHHHHHH
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWE-SAL-TN----TLS--------PGDRIISFLIGQFSLLWIDQQQ 104 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~-~~~-~~----~~~--------~gd~vl~~~~~~~~~~~~~~~~ 104 (401)
+..+.+.|+|+.+++++|.+..+ +++.+|++-.+. -++ .+ ... +.-+.+++.|||=-+. .+++
T Consensus 66 G~l~Gipe~r~l~a~llgv~~~~-viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF--ai~E 142 (425)
T PF12897_consen 66 GGLDGIPEARELFAELLGVPPEN-VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF--AITE 142 (425)
T ss_dssp S-SS--HHHHHHHHHHHTS-GGG-EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH--HHHH
T ss_pred CccCChHHHHHHHHHHhCCCHHH-EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH--HHHH
Confidence 55677899999999999998866 777666664432 222 22 111 1236789999866554 6899
Q ss_pred HcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEec-CCCcccccchHHHHHHhhh--cCCCcEEEEecccccC
Q 015729 105 RLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHN-ETATGVTNNLSKVRKLLDE--YRHPALFLVDGVSSIC 181 (401)
Q Consensus 105 ~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~-~n~tG~~~~l~~i~~l~~~--~~~~~~li~D~a~~~~ 181 (401)
.+|++.+.||+++++ +|.|.+|+.+.+++ .+|.++.+.- +||||.+++-+-+.+++.- .-.+..|+.|.||++-
T Consensus 143 ~~Giemi~VpM~~dG-PDmD~Ve~LV~~D~--svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vH 219 (425)
T PF12897_consen 143 HFGIEMIPVPMTEDG-PDMDMVEELVAEDP--SVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVH 219 (425)
T ss_dssp HCT-EEEEEEEETTE-E-HHHHHHHTHTST--TEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-
T ss_pred hhCcEEEecCCCCCC-CCHHHHHHHHhcCC--ccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEe
Confidence 999999999999887 69999999998765 7899977744 6999999987777777653 2389999999998766
Q ss_pred ccee--------cc-------CcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 182 AIDF--------RM-------DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 182 ~~~~--------~~-------~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
.+.- ++ ...+..+.+.|.+|.-..+.|++++..+++-++.+.... ..-..|
T Consensus 220 hL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~------------~~~tIg-- 285 (425)
T PF12897_consen 220 HLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHL------------SVQTIG-- 285 (425)
T ss_dssp BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHH------------HHH-S---
T ss_pred eccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHh------------cCceeC--
Confidence 5411 11 112345778899998777888999999998766554321 000011
Q ss_pred CCCCCcHHHHHHHHHHHHHHHH-h-cHHHHHHHHH----HHHHHHHHHHHH-cC----C-ccccCCCccCCceeEEEEcC
Q 015729 247 WPYTPSIQLLYGLRAALDLIFE-E-GLENVIERHR----RLGKATRLAVEA-WG----L-KNCTQKEEWFSDTVTAVIVP 314 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~-~-g~~~~~~~~~----~~~~~l~~~L~~-~g----~-~~~~~~~~~~~~~~~~~~~~ 314 (401)
+.=. -+..-.+++.. + |++..+++.. -..+.+.+.|++ +| + ....+ ..++++++..+
T Consensus 286 ----pdKv---NQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P----~GGYFIsld~~ 354 (425)
T PF12897_consen 286 ----PDKV---NQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKP----KGGYFISLDVL 354 (425)
T ss_dssp ------HH---HHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE-------SBSS-EEEEES
T ss_pred ----ccHH---HHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCC----CCceEEEEecC
Confidence 2221 22333344432 2 3333333222 222333344443 22 2 22222 45678999987
Q ss_pred CCCCHHHHHHHHHhhCCeEEcc-CCC-C----CCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 315 SHINSSEIVRRAWQRYNLSLGL-GLN-K----VAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~~-g~~-~----~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
++ .++++.+.+++. ||.+.+ |.. + .....+||++. +-+.+|++.+++.+.-+.+
T Consensus 355 ~G-~AkrvV~lakeA-GV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 355 DG-TAKRVVELAKEA-GVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCVK 414 (425)
T ss_dssp TT--HHHHHHHHHHT-TEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHHH
T ss_pred CC-hHHHHHHHHHHh-CceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 76 788999988776 999877 422 1 12456999654 4789999999999987764
No 375
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.59 E-value=1.7e-12 Score=120.52 Aligned_cols=323 Identities=13% Similarity=0.079 Sum_probs=200.8
Q ss_pred CChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCC-CCCeEEEEc------
Q 015729 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-PGDRIISFL------ 91 (401)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~-~gd~vl~~~------ 91 (401)
.++++++++|...+.. +.-...+.+|++.+++++|.+. ++++..|+.+..+++..+++ ||+++.+..
T Consensus 54 apS~~m~aAM~~GDD~---Y~gdpSv~~Lee~vael~G~E~---alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~ 127 (467)
T TIGR02617 54 AVTQSMQAAMMRGDEA---YSGSRSYYALAESVKNIFGYQY---TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAF 127 (467)
T ss_pred CCCHHHHHHHHcCCcc---cccCchHHHHHHHHHHHhCCce---EEECCCCchHHHHHHHhhcccccccccccccccccc
Confidence 5788899999873332 3334557799999999999987 78898999999988888887 677666332
Q ss_pred -CCcchHHHHHHHHHcCCcEEEEeC----------CCCCCCChHHHHHHHhccCCCCceEEEEEec-CCCcccccc---h
Q 015729 92 -IGQFSLLWIDQQQRLNFNVDVVES----------DWGEGAKLDVLASKLAADTAHTIKAICIVHN-ETATGVTNN---L 156 (401)
Q Consensus 92 -~~~~~~~~~~~~~~~g~~~~~v~~----------~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~-~n~tG~~~~---l 156 (401)
+.||-. ....+...|+.++.+.. +.++.+|++.+++.+++...+++-.+...-. |...|...| +
T Consensus 128 hn~~fet-t~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenl 206 (467)
T TIGR02617 128 SNYFFDT-TQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANL 206 (467)
T ss_pred eEEEEec-chHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHH
Confidence 222221 23456678887776532 2357899999999998632123333322222 333577776 4
Q ss_pred HHHHHHhhhcCCCcEEEEeccccc-----------CcceeccC------cccceEEEecCCCcccCCCcceEEEecHH--
Q 015729 157 SKVRKLLDEYRHPALFLVDGVSSI-----------CAIDFRMD------EWGIDVALTGSQKALSLPTGMGIVCASPK-- 217 (401)
Q Consensus 157 ~~i~~l~~~~~~~~~li~D~a~~~-----------~~~~~~~~------~~~~di~~~s~~K~l~g~~g~G~l~~~~~-- 217 (401)
.++.++|++ +|+.++.|+|--+ ++...++. --.+|.+.+|.+|.++.+.| |+++++++
T Consensus 207 r~V~~la~~--~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~ 283 (467)
T TIGR02617 207 KAVYEIAKK--YDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSF 283 (467)
T ss_pred HHHHHHHHH--cCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhH
Confidence 568889999 9999999986422 11112211 13589999999999987777 78887766
Q ss_pred --HHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCc
Q 015729 218 --ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295 (401)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~ 295 (401)
+.++.+...... -|.-+.+..+.--+-++...|.... -+...++..+..++|.+.|.+.|++
T Consensus 284 ~~l~~~~~~~~i~~-------------EGf~tYGGlagrd~ea~a~Gl~e~~---~~~yl~~ri~qv~yl~~~L~~~Gvp 347 (467)
T TIGR02617 284 FDVYTECRTLCVVQ-------------EGFPTYGGLEGGAMERLAVGLYDGM---NLDWLAYRINQVQYLVNGLEEIGVV 347 (467)
T ss_pred HHHHHHHHhhcccc-------------cCCcCcCchhHHHHHHHHhhhhhcc---cHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 233433322110 0111111233322233322333221 2345566667788999999999999
Q ss_pred cccCCCccCCceeEEEE-------cC-CCCCHHHHHHHHHhhCCeEE------ccCCCCCCC-------cEEEEeecc-c
Q 015729 296 NCTQKEEWFSDTVTAVI-------VP-SHINSSEIVRRAWQRYNLSL------GLGLNKVAG-------KVFRIGHLG-H 353 (401)
Q Consensus 296 ~~~~~~~~~~~~~~~~~-------~~-~~~~~~~l~~~L~~~~~i~v------~~g~~~~~~-------~~~Ri~~~~-~ 353 (401)
+.. .++ + -+.+. +| +..++..++..|....||.- ..+.++..+ ..+|+.+.- .
T Consensus 348 i~~-~Gg-h---av~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrv 422 (467)
T TIGR02617 348 CQQ-AGG-H---AAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRAT 422 (467)
T ss_pred EEe-cCc-c---EEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecccccc
Confidence 865 221 1 12222 12 24577889998887768762 122222111 348986544 6
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 015729 354 LNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 354 ~~~~di~~~~~~i~~~l~~ 372 (401)
.|.+.+|...+++.++.+.
T Consensus 423 yt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 423 YTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccHhHHHHHHHHHHHHHhh
Confidence 6899999999999988754
No 376
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.59 E-value=2e-13 Score=127.03 Aligned_cols=227 Identities=22% Similarity=0.207 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC--------CCCCeEEEEcCCcchHHHHHHHH-------
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQ------- 104 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~------- 104 (401)
..+...++.++|.+.++. ....+.++++|++|++.++.-.. ....+|+....+||+.....+.-
T Consensus 57 ~~~~~~~la~~L~~~~p~-~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~ 135 (339)
T PF00202_consen 57 THPEAAELAEKLAELFPG-GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYR 135 (339)
T ss_dssp EEHHHHHHHHHHHHHSST-TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHH
T ss_pred eccchhhhhhhhhhcccc-ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccc
Confidence 345566888888888854 33459999999999999884422 23468888888888765322221
Q ss_pred -HcC---CcEEEEeCCCCCC-----CChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHHHHHhhhcCCCcE
Q 015729 105 -RLN---FNVDVVESDWGEG-----AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPAL 171 (401)
Q Consensus 105 -~~g---~~~~~v~~~~~~~-----~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i~~l~~~~~~~~~ 171 (401)
..+ ..+..+|.+.... -..+.+++.+.+...+++.++++.......|...+ +++|.++|++ +|++
T Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~--~gil 213 (339)
T PF00202_consen 136 KGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCRE--HGIL 213 (339)
T ss_dssp TTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHH--TT-E
T ss_pred ccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccc--cccc
Confidence 111 1345566542110 00112333333221256889999988888787764 7889999999 9999
Q ss_pred EEEecccccCcc---ee--ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCC
Q 015729 172 FLVDGVSSICAI---DF--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (401)
Q Consensus 172 li~D~a~~~~~~---~~--~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 246 (401)
+|+||++..... .+ +.....+|+++++ |.++++.++|.+++++++.+.+..... ++
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~~~~~i~~~~~~~~~----------------~~- 274 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAVLGSEEIMEAFQPGSH----------------GS- 274 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEEEEEHHHHTTSCTTSS----------------TC-
T ss_pred eecccccccccccCCccceecccccCcccccc--cchhhhhhcccccccchhhcccccccc----------------cc-
Confidence 999999874321 12 2223458999997 999888889999999999887754321 11
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (401)
++..++..+++..++++.+.+++ ..++..+..+++.+.|+++
T Consensus 275 -T~~g~p~~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 275 -TFGGNPLSCAAALATLEILEEED---LLERVRELGERLREGLREL 316 (339)
T ss_dssp -TTTT-HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHH
T ss_pred -ccccchHhhhhhhhHHHhhccHH---HHHHHHHHHHHHHHHHHHH
Confidence 33456677888899999888765 5566677777777777765
No 377
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.57 E-value=4.5e-13 Score=115.49 Aligned_cols=282 Identities=15% Similarity=0.123 Sum_probs=182.1
Q ss_pred HHHHHHHccCcCC------CCCccHHHHHH-HHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCc
Q 015729 22 DQVIRAMNRNNED------YRSPAVPALTK-TLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (401)
Q Consensus 22 ~~v~~a~~~~~~~------~~~~~~~~~~~-~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~ 94 (401)
.+|++++.+.-.. ..++++.++-+ -|.+-.++.+|.+..---.-.-+||+|+.+++..+++|||+.+...-..
T Consensus 38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~P 117 (416)
T COG4100 38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSP 117 (416)
T ss_pred HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCc
Confidence 4677887774321 23566666644 5666669999988532111123789999999999999999988776532
Q ss_pred chHHH---------HHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEec----CCCcccccchHHHHH
Q 015729 95 FSLLW---------IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHN----ETATGVTNNLSKVRK 161 (401)
Q Consensus 95 ~~~~~---------~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~----~n~tG~~~~l~~i~~ 161 (401)
+-..- .......|++...+++..++.+|.+.++..+++ ++|+|.+--. .-|+=.+.+++++++
T Consensus 118 YDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~----~tkli~IQRS~GY~~RpS~~I~eI~~~i~ 193 (416)
T COG4100 118 YDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAISD----RTKLIGIQRSKGYAWRPSLSIAEIEEMIT 193 (416)
T ss_pred chhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcCc----cceEEEEEeccCcCCCCcccHHHHHHHHH
Confidence 32210 123455789999999999999999999999984 6688877632 223333446788888
Q ss_pred HhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCC--cceEEEecHHHHHHhccCCC-CccccchHHHH
Q 015729 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPT--GMGIVCASPKALEASKTAKS-VRVFFDWKDYI 238 (401)
Q Consensus 162 l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~--g~G~l~~~~~~~~~~~~~~~-~~~~~~~~~~~ 238 (401)
+.|+.+.|+++.+|.+++-+.........|+|++.+|.-|.-+|+. --|+++.+.++.+...-+.- ++
T Consensus 194 ~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPG--------- 264 (416)
T COG4100 194 FVKEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPG--------- 264 (416)
T ss_pred HHHhcCCCEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCC---------
Confidence 8888889999999999987776667777899999999999876542 12899999999876532110 00
Q ss_pred HHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCC
Q 015729 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (401)
Q Consensus 239 ~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (401)
..-+.| . .+.++....+-+.- -.....+..+-+.....-|+++|+++.+.....+...+-.+++++...
T Consensus 265 IG~e~G------a---t~~~l~~myqGlFl--APhvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf~~~eK 333 (416)
T COG4100 265 IGREGG------A---TLYSLREMYQGLFL--APHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKFGSKEK 333 (416)
T ss_pred cccccc------c---cHHHHHHHHhhhcc--chHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheecCCHHH
Confidence 001111 1 11222222221111 123455555566666677778899887765555666666777754322
Q ss_pred HHHHHHHHH
Q 015729 319 SSEIVRRAW 327 (401)
Q Consensus 319 ~~~l~~~L~ 327 (401)
--++|+.+.
T Consensus 334 mIaFcqaiQ 342 (416)
T COG4100 334 MIAFCQAIQ 342 (416)
T ss_pred HHHHHHHHh
Confidence 224555543
No 378
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.55 E-value=4.3e-12 Score=128.19 Aligned_cols=313 Identities=15% Similarity=0.108 Sum_probs=202.5
Q ss_pred CcCChHHHHHHHccCcCCC-----CCcc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-CC--CC
Q 015729 17 PVHIPDQVIRAMNRNNEDY-----RSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LS--PG 84 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~-----~~~~----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-~~--~g 84 (401)
+..+|..+.+.+.+..... ++++ ..+.+-+++.+++++.|.+-.. ..+..++|.+-++++.+. .. +.
T Consensus 90 ~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaN-ASl~D~atA~aEA~~ma~~~~~~k~ 168 (954)
T PRK12566 90 GTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLAN-ASLLDEATAAAEAMALAKRVAKSKS 168 (954)
T ss_pred CCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhh-hhhccchhHHHHHHHHHHHHhhcCC
Confidence 4455555546666643221 1222 2344668999999999998432 445667777666544332 22 24
Q ss_pred CeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHH
Q 015729 85 DRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (401)
Q Consensus 85 d~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l 162 (401)
.+|+++...|+... ....++..|++++. +++++.+++ .+..+++.+| |..|.+.|+++|.++
T Consensus 169 ~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~----~~~~v~vq~P-~~~G~i~d~~~i~~~ 232 (954)
T PRK12566 169 NRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAH----AVFGALLQYP-DTHGEIRDLRPLIDQ 232 (954)
T ss_pred CEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCC----CEEEEEEECC-CCceEEccHHHHHHH
Confidence 67888888777654 44566777887775 223333332 3566666665 578999999999999
Q ss_pred hhhcCCCcEEEEeccc--ccCcceeccCcccceEEEecCCCccc-----CCCcceEEEecHHHHHHhccCCCC-------
Q 015729 163 LDEYRHPALFLVDGVS--SICAIDFRMDEWGIDVALTGSQKALS-----LPTGMGIVCASPKALEASKTAKSV------- 228 (401)
Q Consensus 163 ~~~~~~~~~li~D~a~--~~~~~~~~~~~~~~di~~~s~~K~l~-----g~~g~G~l~~~~~~~~~~~~~~~~------- 228 (401)
+|+ .|.++++ ++- +++ +-....++|+||++++.+- |+ |+++.|++++++++.++++.....
T Consensus 233 ~h~--~gal~~~-~~d~laL~-ll~~Pge~GADI~vG~~Q~-fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G 307 (954)
T PRK12566 233 LHG--QQALACV-AADLLSLL-VLTPPGELGADVVLGSTQR-FGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARG 307 (954)
T ss_pred HHH--cCCEEEE-EeCHHHHh-CCCChhhcCCcEEeeCCCc-CCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCC
Confidence 999 8887663 332 222 2234567899999887663 32 345579999999998888776531
Q ss_pred ----ccccchHHHHHHhhcCCCCCCCCcHH---HHHHHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccC
Q 015729 229 ----RVFFDWKDYIKFYNLGTFWPYTPSIQ---LLYGLRAALDL--IFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQ 299 (401)
Q Consensus 229 ----~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~a~~~al~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 299 (401)
....+-.++..+.++.+ +++. .+.+..+++-. +-.+|++++.++...++.++.+.|.+.|+++...
T Consensus 308 ~~a~~l~LqtREQHIRReKAt-----SNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~ 382 (954)
T PRK12566 308 NTALRMALQTREQHIRREKAN-----SNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR 382 (954)
T ss_pred CeeeehhhhHHHHHhhhcccc-----chhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence 11223446667777776 4443 23333344332 2356788999999999999999999999887643
Q ss_pred CCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 300 KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
.+.. -+.+++ .. ++.++.++..++ ||-++.. .++.+.|++..+++++|++.++.++.
T Consensus 383 --~fF~--~~~v~~-~~-~~~~~~~~a~~~-~~n~r~~----~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 383 --HFFD--TLTLEV-GG-AQAAIIESAEAA-RINLRIL----GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred --Cccc--eEEEEc-cC-CHHHHHHHHHHC-CCeeEEe----CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 2222 233444 21 466676666554 7776632 34579999999999999999999884
No 379
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=7.8e-12 Score=112.18 Aligned_cols=323 Identities=16% Similarity=0.111 Sum_probs=200.8
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCC--CCccHHHHHHHHHHHHHHHhcC-CC----Cce--EEecCChhHHHHHHHhc
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY--RSPAVPALTKTLLEDIKKIFKT-TS----GTP--FLIPTTGTGAWESALTN 79 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g~-~~----~~~--i~~~~g~t~a~~~~~~~ 79 (401)
++|-+--|-.++-++|.+|-+.-.... ..+-+.+...+..+.+.+++-. +. ... .+-+.|||.|+..+..-
T Consensus 34 GvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~f 113 (396)
T COG1448 34 GVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADF 113 (396)
T ss_pred eeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHH
Confidence 456666677888888887777644332 2344455666777777665543 31 111 24588999999876533
Q ss_pred --cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC-CCC-CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc
Q 015729 80 --TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES-DWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (401)
Q Consensus 80 --~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~-~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~ 155 (401)
-..+..+|-+++|.+..+. .+.+..|.++...+. +.+ ..+|.+.+-+.+++-+ +...+++=...|||||.-++
T Consensus 114 l~~~~~~~~vwis~PtW~NH~--~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~-~~~vvLLH~CcHNPTG~D~t 190 (396)
T COG1448 114 LARFFPDATVWISDPTWPNHK--AIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAP-EGSVVLLHGCCHNPTGIDPT 190 (396)
T ss_pred HHHhCCCceEEeCCCCcHhHH--HHHHhcCCceeeeeccccccccccHHHHHHHHHhCC-CCCEEEEecCCCCCCCCCCC
Confidence 2456667999999665553 567889999988875 333 3588888888777643 22222222334799999886
Q ss_pred ---hHHHHHHhhhcCCCcEEEEecccccCcceeccC--------cccc-eEEEecCCCcccCCCc--ce---EEEecHHH
Q 015729 156 ---LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD--------EWGI-DVALTGSQKALSLPTG--MG---IVCASPKA 218 (401)
Q Consensus 156 ---l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~--------~~~~-di~~~s~~K~l~g~~g--~G---~l~~~~~~ 218 (401)
+++|.++.++ ++.+-+.|-||..+.--.+-+ ..+. -+++.|.+|.| |..| .| +++-+.+.
T Consensus 191 ~~qW~~l~~~~~~--r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnf-gLYgERVGa~~vva~~~~~ 267 (396)
T COG1448 191 EEQWQELADLIKE--RGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNF-GLYGERVGALSVVAEDAEE 267 (396)
T ss_pred HHHHHHHHHHHHH--cCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhh-hhhhhccceeEEEeCCHHH
Confidence 4567777778 999999998875332212211 1233 57888999998 4544 23 33444444
Q ss_pred HHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHH--HHH---HhcHHHHHHHHHHHHHHHHHHHHHc-
Q 015729 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD--LIF---EEGLENVIERHRRLGKATRLAVEAW- 292 (401)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~--~~~---~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (401)
..++.. +++...+ +. .++||..++..+...|. .+. +.+++..++++.+.++.|++.|++.
T Consensus 268 a~~v~s--------qlk~~iR----~~--ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~ 333 (396)
T COG1448 268 ADRVLS--------QLKAIIR----TN--YSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALG 333 (396)
T ss_pred HHHHHH--------HHHHHHH----hc--cCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 443321 1111111 11 23455555444444442 122 2236778889999999999999984
Q ss_pred ---CCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHH
Q 015729 293 ---GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMI 369 (401)
Q Consensus 293 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~ 369 (401)
.+..+.. +.+ ++. . .|.+.+++ .+|+++++|++.. .+ |++..+ +++..++.+.++|.++
T Consensus 334 ~~~~f~~i~~----Q~G-MFs--y-~Gls~~QV-~rLree~~IY~v~------sG--Ri~vaG-l~~~ni~~va~ai~~v 395 (396)
T COG1448 334 APRNFDFIIS----QRG-MFS--Y-TGLSPEQV-DRLREEFGIYLVA------SG--RINVAG-LNTSNIDYVAKAIAAV 395 (396)
T ss_pred CCcccchHhh----cCc-eee--c-CCCCHHHH-HHHHHhccEEEec------CC--eeeecc-CChhhHHHHHHHHHhh
Confidence 3555543 344 332 3 36666665 6677888998752 23 887666 8999999999999875
No 380
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=5.1e-12 Score=112.83 Aligned_cols=295 Identities=13% Similarity=0.088 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHhccC-CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEe
Q 015729 41 PALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTL-SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE 114 (401)
Q Consensus 41 ~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 114 (401)
...+.-+|+.+|+++ |.+ ++++|++|.|++.|+..++.-++ .+.+.|+++.|.|+=+. ..+ ...|...+...
T Consensus 112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYs-Ati-~l~~~~~v~Yy 189 (475)
T KOG0258|consen 112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYS-ATI-SLLGGTQVPYY 189 (475)
T ss_pred ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhH-HHH-HHhCCccccee
Confidence 344555666666655 432 45779999999999998876644 57788999999766443 333 34566666555
Q ss_pred CCC--CCCCChHHHHHHHhcc-CCCCceEEEEEecCCCcccccc---hHHHHHHhhhcCCCcEEEEecccccCcce----
Q 015729 115 SDW--GEGAKLDVLASKLAAD-TAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID---- 184 (401)
Q Consensus 115 ~~~--~~~~d~~~le~~~~~~-~~~~~~~i~~~~~~n~tG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~~~---- 184 (401)
+++ +|.+|.++|++.+++- ...+++++++.+|.||||.+.. +++|.++|++ +++.++.|++|.--...
T Consensus 190 LdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~--~~l~llaDEVYQ~Nvy~~~sk 267 (475)
T KOG0258|consen 190 LDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAE--EGLVLLADEVYQDNVYTTGSK 267 (475)
T ss_pred eccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHH--cCeEEechHHHHhhccCCCcc
Confidence 554 6789999999988752 2246899999999999999985 7788889999 99999999986421100
Q ss_pred e--------ccCccc---c-eEEEecCCCcccCCCc--ceEEE---ecHHHHHHhccCCCCccccchHHH-HHHhhcCCC
Q 015729 185 F--------RMDEWG---I-DVALTGSQKALSLPTG--MGIVC---ASPKALEASKTAKSVRVFFDWKDY-IKFYNLGTF 246 (401)
Q Consensus 185 ~--------~~~~~~---~-di~~~s~~K~l~g~~g--~G~l~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~ 246 (401)
| ...... + -+...|.||.+.|--| -|++= ..++....+.....-......... .......
T Consensus 268 FhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~Vn-- 345 (475)
T KOG0258|consen 268 FHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVN-- 345 (475)
T ss_pred hHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecC--
Confidence 0 111111 2 2344577887754322 25542 334433322211100000000000 0000111
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeEEEEcCCC---------
Q 015729 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH--------- 316 (401)
Q Consensus 247 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 316 (401)
++. .-....+.+.++ -+.+.+..++.++.+.+.++++ |+.+...++.-+ .+--+.+|.+
T Consensus 346 ----PP~----Pgd~Sy~~~~~E-kd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY--~fP~i~lP~kaie~A~~~~ 414 (475)
T KOG0258|consen 346 ----PPK----PGDPSYDLFSSE-KDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMY--LFPQISLPPKAIEAAKALG 414 (475)
T ss_pred ----CCC----CCCcchhhhhhh-hHhHHHHHHHHhHHHHHHHhhcCceeeccCcccee--ecccccCCHHHHHHHHHhC
Confidence 111 012233333333 2557777888888889999987 888766543211 1122334421
Q ss_pred -CCHHHHHHHHHhhCCeEEccCCCCC--CCcE-EEEeecc
Q 015729 317 -INSSEIVRRAWQRYNLSLGLGLNKV--AGKV-FRIGHLG 352 (401)
Q Consensus 317 -~~~~~l~~~L~~~~~i~v~~g~~~~--~~~~-~Ri~~~~ 352 (401)
.+..-.|..|++..||-+.||+... .|.| +|..+-.
T Consensus 415 ~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp 454 (475)
T KOG0258|consen 415 IAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP 454 (475)
T ss_pred CCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC
Confidence 1223467778888899999996532 3333 8886655
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.49 E-value=4.4e-12 Score=115.54 Aligned_cols=223 Identities=17% Similarity=0.129 Sum_probs=152.8
Q ss_pred CCcCChHHHHHHHccCcCCCC----CccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEc
Q 015729 16 GPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 91 (401)
|-+..++++++++........ .-.......++...-..+.+....+.+.++++.+.|+..++.++.. +.+|++.-
T Consensus 35 G~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~ 113 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSR 113 (395)
T ss_pred CCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEc
Confidence 667788888888887543321 1112223334444344455555444588899999999888777665 55655543
Q ss_pred -----CCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccc--cchHHHHHHhh
Q 015729 92 -----IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT--NNLSKVRKLLD 164 (401)
Q Consensus 92 -----~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~--~~l~~i~~l~~ 164 (401)
.++++. ....+..|++++.+.... .....+++.++.++ +++++-++.+|. |.. .+.++++++|+
T Consensus 114 g~lV~gg~~~v--~d~~~~aG~~l~EvG~tn--~t~~~d~~~AIne~----ta~llkV~s~~~-~f~~~l~~~~l~~ia~ 184 (395)
T COG1921 114 GELVEGGAFRV--PDIIRLAGAKLVEVGTTN--RTHLKDYELAINEN----TALLLKVHSSNY-GFTGMLSEEELVEIAH 184 (395)
T ss_pred cccccCCCCCh--hHHHHHcCCEEEEecccC--cCCHHHHHHHhccC----CeeEEEEeeccc-cccccccHHHHHHHHH
Confidence 244443 577888999999887543 35789999999864 488887777664 544 46788999999
Q ss_pred hcCCCcEEEEecccccCcc-ee---ccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHH
Q 015729 165 EYRHPALFLVDGVSSICAI-DF---RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~-~~---~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
+ +|+++++|++++.... .. .+-+.|+|++++|+.|.|+||. .|++++++++++++...... +.
T Consensus 185 ~--~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~~~l~----------Ra 251 (395)
T COG1921 185 E--KGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQSHPLK----------RA 251 (395)
T ss_pred H--cCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHHHHHHHHhhhhh----------hh
Confidence 9 9999999998764321 11 2234689999999999997666 69999999999887653211 11
Q ss_pred hhcCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 015729 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (401)
Q Consensus 241 ~~~g~~~~~~~~~~~~~a~~~al~~~~~~ 269 (401)
+. ..-..++++.++++.+...
T Consensus 252 lr--------v~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 252 LR--------VDKETLAALEAALELYLQP 272 (395)
T ss_pred hh--------cCcHhHHHHHHHHHHHcCc
Confidence 22 3335568899999988764
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.45 E-value=4.1e-12 Score=115.74 Aligned_cols=298 Identities=13% Similarity=0.113 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhH-HHHHHHhccC--CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCC--C
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTG-AWESALTNTL--SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW--G 118 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~-a~~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~ 118 (401)
...+-..+-+..|.......++++-+|. .+.+.+.++- ..++.|+.+...|.+-. ......|.+++.|+... +
T Consensus 58 tn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~--kai~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 58 TNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCF--KAIERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHH--HHHHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchH--HHHHhcCCeEEEeeccCCCC
Confidence 3344445556678775555677777774 3444444432 46788998888777544 56777899999998532 2
Q ss_pred C-CCChHHHHHHHhccCCCCceEEEEEecCCCcccccc-hHHHHHHhhhcCCCcEEEEecccccCcce------eccCcc
Q 015729 119 E-GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-LSKVRKLLDEYRHPALFLVDGVSSICAID------FRMDEW 190 (401)
Q Consensus 119 ~-~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~-l~~i~~l~~~~~~~~~li~D~a~~~~~~~------~~~~~~ 190 (401)
. ..|.+.+|+++++.. ....+.++++.+...+...| +++|.++|++ +|++.|+..||+.-+.. ......
T Consensus 136 ~l~td~~~ie~~i~~~G-~~~iLcvltttscfapr~~D~i~~IakiC~~--~~IPhlvNnAYgvQ~~~~~~~i~~a~~~G 212 (389)
T PF05889_consen 136 ELITDLEAIEAKIEELG-ADNILCVLTTTSCFAPRLPDDIEEIAKICKE--YDIPHLVNNAYGVQSSKCMHLIQQAWRVG 212 (389)
T ss_dssp EEEEHHHHHHHHHHHHC-GGGEEEEEEESSTTTTB----HHHHHHHHHH--HT--EEEEGTTTTT-HHHHHHHHHHHHHS
T ss_pred eeeccHHHHHHHHHHhC-CCCeEEEEEecCccCCCCCccHHHHHHHHHH--cCCceEEccchhhhHHHHHHHHHHHHhcC
Confidence 1 347888899886543 45578899998888888888 9999999999 99999999999872210 011112
Q ss_pred cceEEEecCCCcccCCCcceEEEecH-HHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh
Q 015729 191 GIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (401)
Q Consensus 191 ~~di~~~s~~K~l~g~~g~G~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~ 269 (401)
.+|+++-|.-|.|..|.|-+.++... ..+..+....+ |. ....+. .-.-..+..+-..
T Consensus 213 Rvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~Yp----------------GR--as~sp~---ld~~itLl~LG~~ 271 (389)
T PF05889_consen 213 RVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYP----------------GR--ASASPS---LDLFITLLSLGCT 271 (389)
T ss_dssp TCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSH----------------SH--BTSHHH---HHHHHHHHHHHHH
T ss_pred CcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhh----------------hh--hhcccc---hHHHHHHHHHhhh
Confidence 46777777777777676655665443 44554443211 11 000111 2233334444455
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCceeEEEEcCC--C---CCHHHHHHHHHhhCCeE----Ecc
Q 015729 270 GLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVPS--H---INSSEIVRRAWQRYNLS----LGL 336 (401)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~l~~~L~~~~~i~----v~~ 336 (401)
|+.....+..+...++++.|+++ +-.+... + .-+..+.+.++. . .+...+...|..+ +|. |.+
T Consensus 272 g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~-p--~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R-~VsG~RvV~~ 347 (389)
T PF05889_consen 272 GYGALLKERKASFPYLKERLKKWAEEVGERLLET-P--RNHISMAFTLDTLYEISQKDGTFLGSMLFKR-GVSGIRVVTP 347 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSS-T--T-SSEEEEE-TTCCTCCSSHHHHHHHHHHHT-TEESSEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC-C--CCCeeEEEECccchhhccchhhhHHHHHHhC-Ccccceeecc
Confidence 67778888888888888888764 4333221 1 233456677631 1 1235778888766 654 221
Q ss_pred CC-------CCCCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Q 015729 337 GL-------NKVAGKVFRIGHLGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 337 g~-------~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~ 371 (401)
.. ..+.-.++-+.+..-.++||+|.++++|+++++
T Consensus 348 ~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 348 GGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 11 112236788855555999999999999999875
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.1e-10 Score=106.64 Aligned_cols=267 Identities=15% Similarity=0.050 Sum_probs=167.9
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCC--ceEEEEEecCCCcccccchHHHHHHhh
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHT--IKAICIVHNETATGVTNNLSKVRKLLD 164 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~--~~~i~~~~~~n~tG~~~~l~~i~~l~~ 164 (401)
+..++..|.|. .+.+...+++.+.++.+.+..++.+.|++++.++.... |-.+..+...+.+-...++.+|..+|+
T Consensus 185 ~Y~SDqahssv--eka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 185 AYCSDQAHSSV--EKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCR 262 (511)
T ss_pred EEecCcccchH--HHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhh
Confidence 45555655554 46778889999999999988999999999998755222 223333333333334457999999999
Q ss_pred hcCCCcEEEEecccccCcc---eeccC---cccceEEEecCCCcccCCCcceEEEecHHH-HHHhccCC-------CCcc
Q 015729 165 EYRHPALFLVDGVSSICAI---DFRMD---EWGIDVALTGSQKALSLPTGMGIVCASPKA-LEASKTAK-------SVRV 230 (401)
Q Consensus 165 ~~~~~~~li~D~a~~~~~~---~~~~~---~~~~di~~~s~~K~l~g~~g~G~l~~~~~~-~~~~~~~~-------~~~~ 230 (401)
+ +|+|+++|+||+..+. .++.- -..+|.+.+.+|||+..-.-|..+++++.. +.+..... ....
T Consensus 263 ~--~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~ 340 (511)
T KOG0628|consen 263 E--EGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS 340 (511)
T ss_pred h--cCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhcc
Confidence 9 9999999999985432 22211 124789999999999766777888877662 10000000 0000
Q ss_pred ccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCceeE
Q 015729 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVT 309 (401)
Q Consensus 231 ~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 309 (401)
..++.+++.-+ |+ . ....-++-.++.+.-+++++..++..++++++-+.+.+- .+++..+ ..-.++
T Consensus 341 ~~Dyrhwqipl--~r------R-fRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~----~~lgLv 407 (511)
T KOG0628|consen 341 APDYRHWQIPL--GR------R-FRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK----RILGLV 407 (511)
T ss_pred CCCcccccccc--cc------c-hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc----ccccee
Confidence 11122111100 00 0 111234555565555556666777777777777777664 6776654 233477
Q ss_pred EEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCCCCcE-EEEeecc-cCCHHHHHHHHHHHHHHHHh
Q 015729 310 AVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKVAGKV-FRIGHLG-HLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 310 ~~~~~~-~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~-~Ri~~~~-~~~~~di~~~~~~i~~~l~~ 372 (401)
+|++.+ ....+++.+++....+|.+.+... .+++ +|++..+ ..+++|++...+.|.+...+
T Consensus 408 cFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l--~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 408 CFRLKGDNEINEALLNRLNSSGRIHLVPASL--HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EEeecCCcHHHHHHHHHHHhcCcEEEEEeee--cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 788732 123457888887666787776643 2444 8998766 55688999999999888766
No 384
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=1.9e-11 Score=109.27 Aligned_cols=330 Identities=15% Similarity=0.097 Sum_probs=205.7
Q ss_pred CCCCcccccCCCcCChHHHHHHHccCcCCC---CC-ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccC
Q 015729 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDY---RS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (401)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~---~~-~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~ 81 (401)
+...+||...+...+-+.+...+.+++... ++ ++..+.=..++++|++++|.+. .++.+-+-.++..++-++.
T Consensus 99 ~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~---aivYs~gF~ti~S~ipafs 175 (467)
T KOG1358|consen 99 FASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTED---AIVYSYGFSTIESAIPAFS 175 (467)
T ss_pred ccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcc---eeeeccccchhhhcchhhh
Confidence 445567777777888888888888875432 22 3333444578999999999987 4566777888888889999
Q ss_pred CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC-----CC---c-eEEEEEecCCCccc
Q 015729 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-----HT---I-KAICIVHNETATGV 152 (401)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~-----~~---~-~~i~~~~~~n~tG~ 152 (401)
++||-+.+....++... .-.+...-.++....+ |.+.+|+.+.+.+. +| + +.++.....-++|.
T Consensus 176 KrGDIi~~de~~nfaIq--~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~ 248 (467)
T KOG1358|consen 176 KRGDIIFVDEAVNFAIQ--KGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGD 248 (467)
T ss_pred ccCcEEEEehhhhHHHH--HHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCc
Confidence 99999888877655543 2222222233444333 67777766654320 01 1 34566666788999
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccCcce---------eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhc
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK 223 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~ 223 (401)
+.|+.+|.++..+ |...||+|+..++|... +......+|++++|+.-.++ ..| |+.+++.-..+.-+
T Consensus 249 i~pl~~iv~lk~K--yk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala-s~G-gFc~G~~~i~~hQr 324 (467)
T KOG1358|consen 249 ICPLPEIVKLKNK--YKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA-SGG-GFCAGKSFIADHQR 324 (467)
T ss_pred ccccHHHHHHHhh--heEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc-ccC-ceeecceeeEeeee
Confidence 9999999999999 99999999998877542 22223358999999887774 332 66666443221111
Q ss_pred cCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 015729 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (401)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (401)
.... |.-+..+.++....++..++.....+. .+.+..+.....+.+.|... ++.+.+..
T Consensus 325 --LSg~--------------~Y~fSAslPp~la~aa~~ai~i~~~~p--~~~~~L~~k~~~~H~~l~~~s~~~v~~~~-- 384 (467)
T KOG1358|consen 325 --LSGS--------------GYCFSASLPPYLAGAAIKAILIEEWNP--EIVQPLRAKVAKFHAALSSNSGFIVSGSP-- 384 (467)
T ss_pred --cccc--------------ceeeeccCchhhhhhHHHHHHHHhhCc--chhhhhhccccccchhhhcCCceEEecCc--
Confidence 0001 111233455555566677777655542 35566666666677777664 66665432
Q ss_pred cCCceeEEEEcCCC-CCH-------HHHHHHHHhhCCeEEccC-CC-----CCCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 303 WFSDTVTAVIVPSH-INS-------SEIVRRAWQRYNLSLGLG-LN-----KVAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 303 ~~~~~~~~~~~~~~-~~~-------~~l~~~L~~~~~i~v~~g-~~-----~~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
-|+ ++.+.+.+. .+. +++...+..+ ++.+... +- ..-..-+||++...++++|++++...|++
T Consensus 385 -~SP-i~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~ 461 (467)
T KOG1358|consen 385 -ESP-IIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKE 461 (467)
T ss_pred -CCc-eeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHH
Confidence 343 444555221 111 1344444445 5554322 11 11123599999999999999999999998
Q ss_pred HHHh
Q 015729 369 ILKD 372 (401)
Q Consensus 369 ~l~~ 372 (401)
+...
T Consensus 462 ~~~~ 465 (467)
T KOG1358|consen 462 VASA 465 (467)
T ss_pred HHHh
Confidence 8654
No 385
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.42 E-value=3.5e-13 Score=121.75 Aligned_cols=222 Identities=18% Similarity=0.156 Sum_probs=56.0
Q ss_pred CCcCChHHHHHHHccCcCCCCC--cc-----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEE
Q 015729 16 GPVHIPDQVIRAMNRNNEDYRS--PA-----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (401)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~--~~-----~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl 88 (401)
|-+++++++++++.+...++.. +. -..-+..+.+.++.+.|.+. .++++|...|+.+++.++ .+|.+|+
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltgAea---A~VvNnnaAAv~L~l~~l-a~~~EvI 89 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTGAEA---ALVVNNNAAAVLLALNTL-AKGKEVI 89 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccc-ccccccc
Confidence 5567888888888874433211 11 11235567788888888776 678888888888776664 4567777
Q ss_pred EEcCCcc----hHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCC--cccc--cchHHHH
Q 015729 89 SFLIGQF----SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETA--TGVT--NNLSKVR 160 (401)
Q Consensus 89 ~~~~~~~----~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~--tG~~--~~l~~i~ 160 (401)
++.-+-. ++....+.+..|+++++|-... ...++++|+++.+ ++.+++..|.+|. .|.. .++++++
T Consensus 90 vsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~t~~~Dye~AI~e----~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~ 163 (367)
T PF03841_consen 90 VSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--RTHLSDYEKAITE----NTAALLKVHTSNFRIQGFTGEVSLEELA 163 (367)
T ss_dssp -----------------------------------------------------------------------------HHH
T ss_pred ccccccccccccccccccccccccccccccccc--ccccccccccccc----cccccccccccccccccccccccHHHHH
Confidence 7643211 1124466777899998887653 3468899999985 5589988887766 3433 4799999
Q ss_pred HHhhhcCCCcEEEEecccccC-------c--ce--eccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCc
Q 015729 161 KLLDEYRHPALFLVDGVSSIC-------A--ID--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (401)
Q Consensus 161 ~l~~~~~~~~~li~D~a~~~~-------~--~~--~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~ 229 (401)
+++++ +++++++|...+.. . .+ .+.-+.|+|+++||+.|.++||. .|+++++++++++++...
T Consensus 164 ~la~~--~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~lI~~lk~~p--- 237 (367)
T PF03841_consen 164 ELAKE--HGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKELIEKLKKHP--- 237 (367)
T ss_dssp HHHHH--HT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHHHHHHHHHHH---
T ss_pred HHHhh--cCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHHHHHHHhhCC---
Confidence 99999 99999999876321 1 01 12345689999999999886655 799999999999876421
Q ss_pred cccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHH
Q 015729 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE 268 (401)
Q Consensus 230 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~ 268 (401)
..+.+. .+=..++++.++++.+..
T Consensus 238 -------l~Ralr--------vdK~tla~L~atL~~Y~~ 261 (367)
T PF03841_consen 238 -------LGRALR--------VDKLTLAALEATLRLYLD 261 (367)
T ss_dssp -------HTTT-B----------HHHHHHHHHHHHH---
T ss_pred -------CcceEe--------eCHHHHHHHHHHHHHHHH
Confidence 001111 333567888888887763
No 386
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.34 E-value=1.4e-09 Score=96.58 Aligned_cols=330 Identities=15% Similarity=0.136 Sum_probs=198.4
Q ss_pred ccCCCcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhcc-----CCCCCeE
Q 015729 13 FVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-----LSPGDRI 87 (401)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~-----~~~gd~v 87 (401)
.-.|...++.....+|-.....+ .-...+..|.+.+++.+|.+. ++.+.-|-.|=++.+..+ ..||.+.
T Consensus 53 TDSGTgams~~qwaamm~GDEAY---agsrs~~~L~~avkdifGfq~---~iPthQGRgAE~Il~~i~ik~~~~~pg~~~ 126 (471)
T COG3033 53 TDSGTGAMTDKQWAAMMRGDEAY---AGSRSYYALADAVKDIFGFQY---TIPTHQGRGAENILIPILIKKGEQEPGSKM 126 (471)
T ss_pred ccCCcccccHHHHHHHhccchhh---cccccHHHHHHHHHHhcCcee---eeeccCCccHHHHHHHHHhhhccccCCccc
Confidence 34566777777776666644332 123345578899999999754 556665555544433222 3467778
Q ss_pred EEEcCCcchHHHHHHHHHcCCcEEEEeCCC----------CCCCChHHHHHHHhccCCCCceEEEEEecCCC-cccccc-
Q 015729 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDW----------GEGAKLDVLASKLAADTAHTIKAICIVHNETA-TGVTNN- 155 (401)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~-tG~~~~- 155 (401)
+++++.||-..- .-.+..|+.++.++.++ .+.+|++.|++.+++-..+.+-.|+++..+|. .|...+
T Consensus 127 ~~~sN~~FdTTr-~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm 205 (471)
T COG3033 127 VAFSNYHFDTTR-GHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSM 205 (471)
T ss_pred cccccceecchh-HHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchH
Confidence 888888887653 33455787777776543 35789999999999755445556655544444 455544
Q ss_pred --hHHHHHHhhhcCCCcEEEEecccccCcc------eeccCcc-----------cceEEEecCCCcccCCCcceEEEecH
Q 015729 156 --LSKVRKLLDEYRHPALFLVDGVSSICAI------DFRMDEW-----------GIDVALTGSQKALSLPTGMGIVCASP 216 (401)
Q Consensus 156 --l~~i~~l~~~~~~~~~li~D~a~~~~~~------~~~~~~~-----------~~di~~~s~~K~l~g~~g~G~l~~~~ 216 (401)
+++..++|++ |+++++.|++...-.. ..+..++ .+|-.+.|..|=-....| |+++.++
T Consensus 206 ~n~r~v~~ia~k--y~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D 282 (471)
T COG3033 206 ANMKAVYEIAKK--YDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKD 282 (471)
T ss_pred HhHHHHHHHHHH--cCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecC
Confidence 6778999999 9999999987432110 0111111 367788888885544555 8999998
Q ss_pred H----HHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc
Q 015729 217 K----ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (401)
Q Consensus 217 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (401)
+ +...++..... .-|.-..+...--.+.++...|..-.+ . ...++.....++|.+.|.+.
T Consensus 283 ~~~fDvy~~~~~~~V~-------------~eG~~tYGgl~GrdmealAvGL~e~~~--~-~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 283 DSFFDVYEECRTLVVV-------------QEGFPTYGGLAGRDMEALAVGLREGVN--F-DYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred ccHHHHHHHHHhheEe-------------eccccccCcccchhHHHHHHHHHHhcC--c-HHHHHHHHHHHHHHHHHHhc
Confidence 7 33333332110 012111112222222333333322111 2 24444556678999999999
Q ss_pred CCccccCCCccCCceeEEEEc----C----CCCCHHHHHHHHHhhCCeEEc-cC-----CCCCCC-------cEEEEeec
Q 015729 293 GLKNCTQKEEWFSDTVTAVIV----P----SHINSSEIVRRAWQRYNLSLG-LG-----LNKVAG-------KVFRIGHL 351 (401)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~l~~~L~~~~~i~v~-~g-----~~~~~~-------~~~Ri~~~ 351 (401)
|+++..+-++ .-+.+.. | +..+++.++..|..+.||... .| .++..+ ..+|+...
T Consensus 347 GVpi~~paGG----Havfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltip 422 (471)
T COG3033 347 GVPIVQPAGG----HAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIP 422 (471)
T ss_pred CCeeEecCCC----ceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEecc
Confidence 9998765332 2222332 2 224677888888877788743 22 222221 34899654
Q ss_pred c-cCCHHHHHHHHHHHHHHHHh
Q 015729 352 G-HLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 352 ~-~~~~~di~~~~~~i~~~l~~ 372 (401)
- +.|.+-+|..+++++.+.+.
T Consensus 423 RrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 423 RRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ccccchhHHHHHHHHHHHHHhc
Confidence 3 66889999999999988764
No 387
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.31 E-value=4.2e-10 Score=97.40 Aligned_cols=345 Identities=13% Similarity=0.083 Sum_probs=196.5
Q ss_pred CCCCC-CCCcccccC----CCcCChHHHHHHHccCcCCCCC--ccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHH
Q 015729 2 DYMYA-PGKNHLFVP----GPVHIPDQVIRAMNRNNEDYRS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWE 74 (401)
Q Consensus 2 ~~~~~-~~~~~~~~~----~p~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~ 74 (401)
.||+- .+.-||++- -....+|+|++|...+...... .-..+...++.+.|..-+ +.-+.++|+++|++|+.
T Consensus 39 QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RFlhd~lv~cA~~l~stl--PeLsvc~F~NSGSEAND 116 (452)
T KOG1403|consen 39 QYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRFLHDELVQCARTLTSTL--PELSVCFFVNSGSEAND 116 (452)
T ss_pred ceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHhhcC--CCceEEEEecCCchhhH
Confidence 34433 334444443 3566778888888775432211 111122223333322221 22244788999999999
Q ss_pred HHHhc--cCCCCCeEEEEcCCcchHH---H----HHHHHHcCC-c--EEEEe-CCC--CCC-------------CChHHH
Q 015729 75 SALTN--TLSPGDRIISFLIGQFSLL---W----IDQQQRLNF-N--VDVVE-SDW--GEG-------------AKLDVL 126 (401)
Q Consensus 75 ~~~~~--~~~~gd~vl~~~~~~~~~~---~----~~~~~~~g~-~--~~~v~-~~~--~~~-------------~d~~~l 126 (401)
++++- -+.+...+++.+..|+++. + .+.-+..+. + .+.|. ++. .+. .-.+.+
T Consensus 117 LALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~v 196 (452)
T KOG1403|consen 117 LALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPV 196 (452)
T ss_pred HHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHH
Confidence 98733 3445556777777777654 1 111122222 2 22222 211 111 112344
Q ss_pred HHHHhc--cCCCCceEEEEEecCCCcccccch-HHHHHHhhh-cCCCcEEEEecccccCcc----eeccC--cccceEEE
Q 015729 127 ASKLAA--DTAHTIKAICIVHNETATGVTNNL-SKVRKLLDE-YRHPALFLVDGVSSICAI----DFRMD--EWGIDVAL 196 (401)
Q Consensus 127 e~~~~~--~~~~~~~~i~~~~~~n~tG~~~~l-~~i~~l~~~-~~~~~~li~D~a~~~~~~----~~~~~--~~~~di~~ 196 (401)
++.+.. ..+..+.+++....++-.|.+.|. ....++++. ++.|.+.|.|+++..+.. ...++ ..=+||++
T Consensus 197 k~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVt 276 (452)
T KOG1403|consen 197 KEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVT 276 (452)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchhe
Confidence 554432 122346667777777888888763 345555555 459999999999864321 11112 22367776
Q ss_pred ecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHhcHHHHHH
Q 015729 197 TGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (401)
Q Consensus 197 ~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 276 (401)
.. |.++.+-+.+.++..++..+.+...... |+ ..+.-++..++...+.++..+.+ ++.+
T Consensus 277 mg--KpmGNGhPVa~VattkeIA~Af~atgv~--YF--------------NTyGGnPVsCAv~laVm~v~e~E---~Lq~ 335 (452)
T KOG1403|consen 277 MG--KPMGNGHPVAAVATTKEIAQAFHATGVE--YF--------------NTYGGNPVSCAVGLAVMRVCEDE---NLQE 335 (452)
T ss_pred ec--ccCCCCCeeeEEeccHHHHHHhccccce--eh--------------hccCCCchhHHHHHHHHHHHhhh---hHHH
Confidence 55 8887677789999999998877654321 11 12234445556667777766654 4666
Q ss_pred HHHHHHHHHHHHHHHc--CCccccCCCccCCceeEEEEc--------CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEE
Q 015729 277 RHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIV--------PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVF 346 (401)
Q Consensus 277 ~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~ 346 (401)
..++..++|...|+++ ..++.+.- ...+.++.+.+ |+...+.-+..+|++.++|.+..-.. ..+.+
T Consensus 336 ha~~vG~~L~~lL~~~k~kh~~IGDv--RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~Nil 411 (452)
T KOG1403|consen 336 HAQQVGEKLEVLLRRLKQKHECIGDV--RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNIL 411 (452)
T ss_pred HHHHHHHHHHHHHHHHhhhccceecc--ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCcee
Confidence 6777777777777765 44444432 23344444543 11112335677788888888764322 35678
Q ss_pred EEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 347 RIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 347 Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
.|-+.-+.++++.++++..++++|..+
T Consensus 412 KiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 412 KIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred ecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 887766789999999999999988643
No 388
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.23 E-value=1.5e-09 Score=103.06 Aligned_cols=319 Identities=15% Similarity=0.089 Sum_probs=195.1
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEec-CChhH---HHHHHHhccC-CCCC---eE-EEEcCCcchHHHHHHHHHcCCc
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIP-TTGTG---AWESALTNTL-SPGD---RI-ISFLIGQFSLLWIDQQQRLNFN 109 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~---a~~~~~~~~~-~~gd---~v-l~~~~~~~~~~~~~~~~~~g~~ 109 (401)
++.+.+.+|++.+.++.|-+. +.+. ++|.+ |-..++++.+ .+|+ +| +++... ++... ..+...|.+
T Consensus 579 GY~~lf~~Le~~Lc~iTG~D~---~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSA-HGTNP-ASA~Magmk 653 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGFDS---FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSA-HGTNP-ASAAMAGMK 653 (1001)
T ss_pred hHHHHHHHHHHHhheeecccc---eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecc-cCCCh-hhHHhcCCE
Confidence 466778899999999988876 4453 33333 2333455543 3332 33 444443 43332 346778999
Q ss_pred EEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc-chHHHHHHhhhcCCCcEEEEecccccC-cceecc
Q 015729 110 VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-NLSKVRKLLDEYRHPALFLVDGVSSIC-AIDFRM 187 (401)
Q Consensus 110 ~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~-~l~~i~~l~~~~~~~~~li~D~a~~~~-~~~~~~ 187 (401)
++.|.++.++.+|..+|+++.++.. ++..+++++.|++ .|... .++++.++.++ +|.-|..|+|---. .--...
T Consensus 654 vvpV~~~~~G~id~~dLk~kaekh~-~~Laa~MvTYPST-~GvfE~~i~d~cd~iHe--hGGQVYlDGANMNAqVGlc~p 729 (1001)
T KOG2040|consen 654 VVPVGCDANGNIDMVDLKAKAEKHK-DNLAALMVTYPST-HGVFEEGIDDICDIIHE--HGGQVYLDGANMNAQVGLCRP 729 (1001)
T ss_pred EEEeeccCCCCccHHHHHHHHHHhh-hhhheeEEecccc-cccccccHHHHHHHHHh--cCCEEEecCCCccceecccCC
Confidence 9999999999999999999988755 5678889998765 56665 58999999999 99999999873210 001234
Q ss_pred CcccceEEEecCCCccc-----CCCcceEEEecHHHHHHhccCCCCcc-ccchHHHHHHhhcCCCCCCCCcHHHHHHHHH
Q 015729 188 DEWGIDVALTGSQKALS-----LPTGMGIVCASPKALEASKTAKSVRV-FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRA 261 (401)
Q Consensus 188 ~~~~~di~~~s~~K~l~-----g~~g~G~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~ 261 (401)
.+.|.|+--...||+|+ |++|+|-+.+++.+..-++.....+. ...-........+.. .++..++ ...++
T Consensus 730 Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP--~Gsa~IL--pISwa 805 (1001)
T KOG2040|consen 730 GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAP--WGSALIL--PISWA 805 (1001)
T ss_pred ccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccC--CCcceee--hhHHH
Confidence 46779999999999985 34677888887776544433221100 000000001111111 1112221 12244
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEc-----CCCCCHHHHHHHHHhhCCeEEcc
Q 015729 262 ALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV-----PSHINSSEIVRRAWQRYNLSLGL 336 (401)
Q Consensus 262 al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~L~~~~~i~v~~ 336 (401)
=++.....|+...-+...-++.|+.++|+.- ++++.......-..-+.+.+ ..++++.+++++|.+ +|..-..
T Consensus 806 YikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~D-YgFHaPT 883 (1001)
T KOG2040|consen 806 YIKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMD-YGFHAPT 883 (1001)
T ss_pred HHHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHh-ccCCCCc
Confidence 4455556678777777888999999999884 33322211111111111222 135788899999975 4654322
Q ss_pred CCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHhc
Q 015729 337 GLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDV 373 (401)
Q Consensus 337 g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~ 373 (401)
...+. .+.+=|-+....+++|+|++++++-.+.+|+
T Consensus 884 mswPV-~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 884 MSWPV-AGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred ccccc-CCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 23333 4456665655566889999999987665554
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.02 E-value=3.8e-08 Score=93.67 Aligned_cols=290 Identities=14% Similarity=0.119 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc-cCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEG 120 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~-~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 120 (401)
.-..+-+++++.|.+-.. ..+..-||.|-+++..+ -..++++.++....|+... ....+..+|++++..
T Consensus 165 llNyQTmi~dlTGL~~aN-ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~------- 236 (1001)
T KOG2040|consen 165 LLNYQTMITDLTGLPMAN-ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS------- 236 (1001)
T ss_pred HhhhHHhhhhccCCcccc-hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec-------
Confidence 335677788999987443 44455567776665433 3456677888888877654 222233344443332
Q ss_pred CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCC
Q 015729 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQ 200 (401)
Q Consensus 121 ~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~ 200 (401)
|+++.... . +.+..+++-.| +.-|.+.|..++++.+++ .+.++++-.---..++--...++|+||.++|++
T Consensus 237 -~~~~~~~s-~----~~v~gvlvQYP-~t~G~i~d~~el~~~a~~--~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQ 307 (1001)
T KOG2040|consen 237 -DIKEADYS-S----KDVSGVLVQYP-DTEGSVLDFDELVELAHA--NGSLVVMATDLLALTILRPPGEFGADIAVGSSQ 307 (1001)
T ss_pred -CHHHhhcc-c----cceeEEEEEcC-CCCCcccCHHHHHHHhhc--cCceEEEeehhhHHHccCChhhcCceeeecccc
Confidence 22222111 1 23455665555 557999999999999999 888766532211122333456789999999999
Q ss_pred CcccCCCc-----ceEEEecHHHHHHhccCCCC-----------ccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHH
Q 015729 201 KALSLPTG-----MGIVCASPKALEASKTAKSV-----------RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD 264 (401)
Q Consensus 201 K~l~g~~g-----~G~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~ 264 (401)
. |+.|.| .|+++++.++.+.++..... ....+..++..+.++.+ +++..+-++.+-+.
T Consensus 308 R-FGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKAT-----SNICTAQALLANma 381 (1001)
T KOG2040|consen 308 R-FGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKAT-----SNICTAQALLANMA 381 (1001)
T ss_pred c-cCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccc-----hhhhHHHHHHHHHH
Confidence 8 545544 36888888887776655421 11123334555555554 66654444444433
Q ss_pred HH-----HHhcHHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC
Q 015729 265 LI-----FEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN 339 (401)
Q Consensus 265 ~~-----~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~ 339 (401)
.+ ..+|++.+.++....+..|...|+..|.++... .+.. .+.+++ .. +.+++..+..++ +|-++
T Consensus 382 AmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k--~fFD--TLkI~~-~~-s~~~~l~rA~~~-~iNlr---- 450 (1001)
T KOG2040|consen 382 AMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHK--PFFD--TLKIRC-GC-SAEEVLDRAAKR-QINLR---- 450 (1001)
T ss_pred HHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhccc--cccc--eEEEEe-cC-cHHHHHHHHHhh-cCceE----
Confidence 22 245799999999999999999999988776543 1122 233555 22 567777776554 55544
Q ss_pred CCCCcEEEEeecccCCHHHHHHHHHHHH
Q 015729 340 KVAGKVFRIGHLGHLNELQLLGCLAGVE 367 (401)
Q Consensus 340 ~~~~~~~Ri~~~~~~~~~di~~~~~~i~ 367 (401)
....+.+-++.-.+.+++|+|.++..+.
T Consensus 451 ~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 451 LVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred EeecCceEEeecccccHHHHHHHHHHHc
Confidence 2345678898888999999999998886
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.92 E-value=2.1e-07 Score=83.18 Aligned_cols=282 Identities=13% Similarity=0.067 Sum_probs=134.6
Q ss_pred HHHHHHHHHHh---c-C-CCCceEEecCChhHHHHHHHhccCCC------CCeEEEEcCCcchHHHHHHHHHcCC-cEEE
Q 015729 45 KTLLEDIKKIF---K-T-TSGTPFLIPTTGTGAWESALTNTLSP------GDRIISFLIGQFSLLWIDQQQRLNF-NVDV 112 (401)
Q Consensus 45 ~~l~~~la~~~---g-~-~~~~~i~~~~g~t~a~~~~~~~~~~~------gd~vl~~~~~~~~~~~~~~~~~~g~-~~~~ 112 (401)
.||++.|+++. | + ....-+++..|+|+.+++++.++-.. --+|+...|- ++.+ ......+.- ...+
T Consensus 46 ~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPY-Y~~Y-~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 46 PELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPY-YSSY-PEQTDFFDSRLYKW 123 (363)
T ss_dssp HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS---CHH-HHHCCCT-BTTEEE
T ss_pred HHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCC-ccch-HHHHHhccccCccc
Confidence 34555554443 2 1 23344999999999999988765322 1367777774 4433 122222221 1222
Q ss_pred EeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccc
Q 015729 113 VESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGI 192 (401)
Q Consensus 113 v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~ 192 (401)
-- + ...+. ++++ ..+-+=+++.||||.|.+-. .+++. .+..+|.|-|+.+.....-.....-
T Consensus 124 ~G-d------a~~~~---~~~~-~~~~IElVTSPNNPDG~lr~-----~V~~g--~~~k~I~D~AYYWPhyTpI~~~aD~ 185 (363)
T PF04864_consen 124 AG-D------ASNFK---NSDN-PSPYIELVTSPNNPDGQLRE-----AVLNG--SSGKVIHDLAYYWPHYTPITAPADH 185 (363)
T ss_dssp EE-E------CCCGT---T-S--CCGEEEEEESS-TTT-----------SSTT--TEEEEEEE-TT-STTTS---S-B--
T ss_pred cc-c------HHhhc---cCCC-CCCeEEEEeCCCCCcccccc-----hhcCC--CCcceeeeeeeecccccccCCCCCC
Confidence 21 1 11111 1111 23445599999999998632 12344 6778999999887653221223346
Q ss_pred eEEEecCCCcccCCCc--ceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh-
Q 015729 193 DVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE- 269 (401)
Q Consensus 193 di~~~s~~K~l~g~~g--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~- 269 (401)
|+.+|+.+| +.|..| +|+.+++++...+-.. .+++..+ . ..+--...-+...|+.+...
T Consensus 186 DiMLFT~SK-~TGHAGSR~GWAlVKD~~Va~kM~--------------~y~~lnT--i-GvS~dsQLRa~kiLk~v~~~~ 247 (363)
T PF04864_consen 186 DIMLFTLSK-LTGHAGSRFGWALVKDEEVAKKMT--------------KYMELNT--I-GVSRDSQLRALKILKVVLDGY 247 (363)
T ss_dssp SEEEEEHHH-HCS-GGG-EEEEEES-HHHHHHHH--------------HHHHHHC--S-S--HHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEec-ccCccccccceeeecCHHHHHHHH--------------HHHHHhc--c-cCcHHHHHHHHHHHHHHHhcc
Confidence 899999999 456665 5999999876432211 1111111 0 12221111122222222211
Q ss_pred ----c----HHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc---------cCCceeEEEEcCCCCCHHHHHHHHHhhCC
Q 015729 270 ----G----LENVIERHRRLGKATRLAVEAW-GLKNCTQKEE---------WFSDTVTAVIVPSHINSSEIVRRAWQRYN 331 (401)
Q Consensus 270 ----g----~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 331 (401)
+ ++--.+..+++-+.|++.+.+- .+.+....+. .-++.+.|++.... ...+....|+ +.+
T Consensus 248 ~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-ed~DC~~~l~-~~~ 325 (363)
T PF04864_consen 248 GTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-EDEDCYAVLR-EAK 325 (363)
T ss_dssp CHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-GGSSHHHHHH-CTT
T ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-ccccHHHHHH-hCC
Confidence 1 2222333334444444444332 2222111111 12567899998432 2345555565 459
Q ss_pred eEEccCCCC-CCCcEEEEeecccCCHHHHHHHHHHHHH
Q 015729 332 LSLGLGLNK-VAGKVFRIGHLGHLNELQLLGCLAGVEM 368 (401)
Q Consensus 332 i~v~~g~~~-~~~~~~Ri~~~~~~~~~di~~~~~~i~~ 368 (401)
|..+.|... ...+++|||..- +++|+|.++++|..
T Consensus 326 I~tr~G~~fga~~ryVRlSml~--~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 326 IITRSGVLFGADSRYVRLSMLK--RDDDFDQLLERLSK 361 (363)
T ss_dssp EEEEEGGGGTS-TTEEEEESSS---HHHHHHHHHHHHC
T ss_pred cccCCCCccCCCCCeEEEeccC--CHHHHHHHHHHHHh
Confidence 999998442 356789999876 89999999999864
No 391
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.50 E-value=0.00012 Score=64.57 Aligned_cols=270 Identities=14% Similarity=0.118 Sum_probs=149.1
Q ss_pred EecCChhHHHHHHH---hccCCCCCeEEEEcCCcchHHHHHHHHHcCC-cEEEEeC--CCCCCCChHHHHHHHhccCCCC
Q 015729 64 LIPTTGTGAWESAL---TNTLSPGDRIISFLIGQFSLLWIDQQQRLNF-NVDVVES--DWGEGAKLDVLASKLAADTAHT 137 (401)
Q Consensus 64 ~~~~g~t~a~~~~~---~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~-~~~~v~~--~~~~~~d~~~le~~~~~~~~~~ 137 (401)
+-+-|||.|+.++. ..+++ ...|.++.|.+..+. .+++..|. ++...+. .++..+|.+-+-..+..-+ +
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~--~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~AP-e- 177 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHH--AIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAP-E- 177 (410)
T ss_pred eeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHH--HHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCC-C-
Confidence 33568899988754 22344 456889888666554 45666774 3333332 2234678888887776544 2
Q ss_pred ceEEEEE--ecCCCcccccchH---HHHHHhhhcCCCcEEEEecccccCc-ceeccCc--------ccc-eEEEecCCCc
Q 015729 138 IKAICIV--HNETATGVTNNLS---KVRKLLDEYRHPALFLVDGVSSICA-IDFRMDE--------WGI-DVALTGSQKA 202 (401)
Q Consensus 138 ~~~i~~~--~~~n~tG~~~~l~---~i~~l~~~~~~~~~li~D~a~~~~~-~~~~~~~--------~~~-di~~~s~~K~ 202 (401)
+.+++. ..+||||.-..-+ .|++..++ .+.+.+.|-++...+ -..+.+. .|. -+++-|..|.
T Consensus 178 -~si~iLhaCAhNPTGmDPT~EQW~qia~vik~--k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKN 254 (410)
T KOG1412|consen 178 -GSIIILHACAHNPTGMDPTREQWKQIADVIKS--KNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKN 254 (410)
T ss_pred -CcEEeeeccccCCCCCCCCHHHHHHHHHHHHh--cCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhh
Confidence 333333 3489999887644 46666666 899999998865322 2222222 234 3566789999
Q ss_pred ccCCCc--ce---EEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHH--HHHhc---HH
Q 015729 203 LSLPTG--MG---IVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL--IFEEG---LE 272 (401)
Q Consensus 203 l~g~~g--~G---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~--~~~~g---~~ 272 (401)
+ |..+ .| ++.-++..+..+. .++.....+. .++|+-.++--+...|.- +.+++ ++
T Consensus 255 f-GlYneRvGnltvv~~n~a~i~~v~------------SQl~lviR~~--~SNPPAyGArIV~kvL~tP~lre~W~~sik 319 (410)
T KOG1412|consen 255 F-GLYNERVGNLTVVVNNPAVIAGVK------------SQLTLVIRSN--WSNPPAYGARIVHKVLSTPELREQWIQSIK 319 (410)
T ss_pred c-ccccccccceEEEecChhHHHHHH------------HHHHHHHhhc--cCCCcchhhHHHHHHhcCHHHHHHHHHHHH
Confidence 8 4432 33 4444444433222 1111111111 223444333333333321 11221 44
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC----ccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEE
Q 015729 273 NVIERHRRLGKATRLAVEAWGL----KNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRI 348 (401)
Q Consensus 273 ~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri 348 (401)
....|+.+.+..|++.|..++- .-... +.+ ++ .+ .|++..++ +.|.+++.|++. ..+ |+
T Consensus 320 ~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~----QiG-MF--Sy-TGLtp~qV-~~li~~h~vyLl------~~G--RI 382 (410)
T KOG1412|consen 320 TMSSRIKKMRTALRDHLVALKTPGTWDHITQ----QIG-MF--SY-TGLTPAQV-DHLIENHKVYLL------SDG--RI 382 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHh----hcc-ce--ee-cCCCHHHH-HHHHHhceEEEe------cCC--cE
Confidence 5556666666777777766532 11111 222 33 33 56666555 667777788864 234 66
Q ss_pred eecccCCHHHHHHHHHHHHHHHHhcC
Q 015729 349 GHLGHLNELQLLGCLAGVEMILKDVG 374 (401)
Q Consensus 349 ~~~~~~~~~di~~~~~~i~~~l~~~~ 374 (401)
+.++ ++..-+|+..++|.+....+.
T Consensus 383 nisG-LN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 383 NISG-LNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred eeec-cccccHHHHHHHHHHHHHhhc
Confidence 6555 677788999999998877553
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.45 E-value=2.6e-05 Score=69.71 Aligned_cols=214 Identities=18% Similarity=0.154 Sum_probs=132.4
Q ss_pred hHHHHHHHhccCC--CCceEEEEEecCCCccccc--c--hHHHHHHhhhcCCCcEEEEecccccCcc----e----eccC
Q 015729 123 LDVLASKLAADTA--HTIKAICIVHNETATGVTN--N--LSKVRKLLDEYRHPALFLVDGVSSICAI----D----FRMD 188 (401)
Q Consensus 123 ~~~le~~~~~~~~--~~~~~i~~~~~~n~tG~~~--~--l~~i~~l~~~~~~~~~li~D~a~~~~~~----~----~~~~ 188 (401)
++++|+.+.+... ..+.++++...++..|.-. | ...+++++++ |++.+|+|+++..|.. + .+.+
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~K--h~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKK--HGVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHh--cCeEEEeeeeecCCCccCceeeehhcCCC
Confidence 4567777654221 1356778888888777654 2 6789999999 9999999999875532 1 1111
Q ss_pred cccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHH
Q 015729 189 EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE 268 (401)
Q Consensus 189 ~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~ 268 (401)
..+|+++|| |-|. .| |+. -.++ +++..+...+ ..|--.+.-..-+.++++.+++
T Consensus 333 -~PpD~vTFS--KK~q--~g-Gff-h~~~----frpn~pYrif---------------NTWmGdP~k~lll~~vv~~I~~ 386 (484)
T KOG1405|consen 333 -SPPDVVTFS--KKFQ--TG-GFF-HDEE----FRPNEPYRIF---------------NTWMGDPSKNLLLEEVVQEIKR 386 (484)
T ss_pred -CCccceehh--hhhh--cC-ccc-cCcc----cCCCchHHHh---------------hhhcCChHHHHHHHHHHHHHhH
Confidence 247888887 5452 22 322 2222 2222111111 0111222333456677777766
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHcCCccccC-CCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEE
Q 015729 269 EGLENVIERHRRLGKATRLAVEAWGLKNCTQ-KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFR 347 (401)
Q Consensus 269 ~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~R 347 (401)
+ .+.++.....+.|.++|.++.-+.... +.-...++++++.+|.+.-.+.++..++-+ |+.+..+ ...-+|
T Consensus 387 ~---~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~n-Gv~~GGC----g~~siR 458 (484)
T KOG1405|consen 387 E---DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLN-GVNLGGC----GDKSIR 458 (484)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHc-Cceeccc----ccceee
Confidence 4 578888889999999998862222111 112246789999998765455677767655 8876422 234578
Q ss_pred EeecccCCHHHHHHHHHHHHHHHHh
Q 015729 348 IGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 348 i~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+-+....++.-.+-+++++++.++.
T Consensus 459 fRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 459 FRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eccceeehhhhHHHHHHHHHHHhcc
Confidence 8777767888899999999998864
No 393
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.40 E-value=2.4e-05 Score=69.76 Aligned_cols=323 Identities=15% Similarity=0.069 Sum_probs=172.9
Q ss_pred CcccccCCCcCChHHHHHHHccCcCCCC--CccHHHHHHHHHHHHHHHh-cCC----CCceEE--ecCChhHHHHHHH--
Q 015729 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR--SPAVPALTKTLLEDIKKIF-KTT----SGTPFL--IPTTGTGAWESAL-- 77 (401)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~l~~~la~~~-g~~----~~~~i~--~~~g~t~a~~~~~-- 77 (401)
+.|.+--|...+.+.|.+|-++-..... .|.+.....|+.+..+++. |.. .+..++ -+-+||.|+-...
T Consensus 60 GaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~F 139 (427)
T KOG1411|consen 60 GAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEF 139 (427)
T ss_pred cceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHH
Confidence 3455555555555666666554322111 1222333556666555544 322 111232 2557788876543
Q ss_pred hccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC--CCCCCCChHHHHHHHhccCCCCceEEEEE--ecCCCcccc
Q 015729 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAADTAHTIKAICIV--HNETATGVT 153 (401)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~~~le~~~~~~~~~~~~~i~~~--~~~n~tG~~ 153 (401)
.+.+-++..|.+++|.+- ++ .......|+.+..... .....+|.+-+-+.+.+-+ + ..+++. ..|||||+-
T Consensus 140 l~~f~~~~~I~ip~PTWg-Nh-~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p-~--gs~ilLhaCaHNPTGvD 214 (427)
T KOG1411|consen 140 LARFYPSRDIYIPDPTWG-NH-KNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAP-E--GSIILLHACAHNPTGVD 214 (427)
T ss_pred HHhhccccceeecCCccc-cc-CccccccCcceeeeeeccccccccchHHHHHHHhcCC-C--CcEEEeehhhcCCCCCC
Confidence 333456888999998533 33 2345566776554443 3344678877666666544 2 233443 458999987
Q ss_pred cc---hHHHHHHhhhcCCCcEEEEecccccCc-ceeccC---------cccceEEEecCCCcccCCCc--c---eEEEec
Q 015729 154 NN---LSKVRKLLDEYRHPALFLVDGVSSICA-IDFRMD---------EWGIDVALTGSQKALSLPTG--M---GIVCAS 215 (401)
Q Consensus 154 ~~---l~~i~~l~~~~~~~~~li~D~a~~~~~-~~~~~~---------~~~~di~~~s~~K~l~g~~g--~---G~l~~~ 215 (401)
.. .++|.++.++ .+.+-+.|.++..++ -..+.+ +.+--.++-|..|.+ |..| . .+++-+
T Consensus 215 Pt~eqw~ki~~~~~~--k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM-GLYgERvGa~svvc~~ 291 (427)
T KOG1411|consen 215 PTKEQWEKISDLIKE--KNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM-GLYGERVGALSVVCKD 291 (427)
T ss_pred ccHHHHHHHHHHhhh--ccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc-chhhhccceeEEEecC
Confidence 75 5567777777 889999998875332 112211 223345667899998 4544 2 455555
Q ss_pred HHHHHHhccCCCCccccchHHHHHHhhcCCCCCCCCcHHHHHHHHHHH---HHHHHh--cHHHHHHHHHHHHHHHHHHHH
Q 015729 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAAL---DLIFEE--GLENVIERHRRLGKATRLAVE 290 (401)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~al---~~~~~~--g~~~~~~~~~~~~~~l~~~L~ 290 (401)
.+...+... +.+.+..+. ..+||..+.-.+...+ ++..++ .++....++...++.+.+.|+
T Consensus 292 ad~A~rV~S------------Qlk~liRpm--YSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~ 357 (427)
T KOG1411|consen 292 ADEAKRVES------------QLKILIRPM--YSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALE 357 (427)
T ss_pred HHHHHHHHH------------HHHHHhccc--ccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhh
Confidence 554433321 111111111 2234443221111111 111111 256677788888888999998
Q ss_pred HcCCcc----ccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecccCCHHHHHHHHHHH
Q 015729 291 AWGLKN----CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGV 366 (401)
Q Consensus 291 ~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i 366 (401)
..|... +.. +.+ ++ -+ .+++.+++ +.|.+++.|+.. ..+ |||..+ ++..-++++.++|
T Consensus 358 ~~gs~~~W~hI~~----QIG-MF--~f-Tgl~peQv-~~l~ke~~iYmT------~dG--RiS~aG-~ss~nV~yLa~ai 419 (427)
T KOG1411|consen 358 KEGSPGNWSHITK----QIG-MF--CF-TGLNPEQV-DWLTKEYHIYLT------KDG--RISMAG-LSSSNVPYLADAI 419 (427)
T ss_pred cCCCCccHHHHHH----hhh-ee--ee-cCCCHHHH-HHHHhhheeeec------cCc--eEeecc-ccccCCcccchhh
Confidence 764332 221 233 22 23 45565555 556666677754 123 676655 6666778888877
Q ss_pred HHHHH
Q 015729 367 EMILK 371 (401)
Q Consensus 367 ~~~l~ 371 (401)
.++-+
T Consensus 420 h~vtk 424 (427)
T KOG1411|consen 420 HAVTK 424 (427)
T ss_pred HhHhc
Confidence 66543
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.62 E-value=0.00025 Score=57.67 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHhc--CC-CCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcc
Q 015729 41 PALTKTLLEDIKKIFK--TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g--~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~ 95 (401)
.++.+.+.+.+.+.+| .+ .+++|++++|+++|++.++.+++.|||.|++++|.|+
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3444444455555545 22 3456999999999999999999999999999999765
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.39 E-value=0.14 Score=44.62 Aligned_cols=173 Identities=14% Similarity=0.155 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChh-HHHHHHHhccC--CC-CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTTGT-GAWESALTNTL--SP-GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g~t-~a~~~~~~~~~--~~-gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
-.++...+-.+.|.-.-...++++-+| ..+.+.+.++- +| -+-|+.+.-..-|- + +..-..|.+++.++.-.++
T Consensus 59 sne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~-~-ksi~~agfepiiie~i~d~ 136 (432)
T KOG3843|consen 59 SNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSC-F-KSIIHAGFEPIIIENILDG 136 (432)
T ss_pred HHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHH-H-HHHHhcCCCceeeeccccc
Confidence 345555555566653211133333233 22333333322 23 34455544322221 2 3345578888888743222
Q ss_pred ---CCChHHHHHHHhccCCCCceEEEEEecCCCcccc-----cchHHHHHHhhhcCCCcEEEEecccccCcce------e
Q 015729 120 ---GAKLDVLASKLAADTAHTIKAICIVHNETATGVT-----NNLSKVRKLLDEYRHPALFLVDGVSSICAID------F 185 (401)
Q Consensus 120 ---~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~-----~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~------~ 185 (401)
.-|++..++.+.+-. +..|+..+.. |.-. ..+++|..+|.. |+++-|+..+|+.-... .
T Consensus 137 d~l~tdleav~~~iee~g---~dcilci~st--tscfapr~pd~leaiaaica~--~diphivnnayglqsee~i~~iaa 209 (432)
T KOG3843|consen 137 DELITDLEAVEAIIEELG---EDCILCIHST--TSCFAPRSPDNLEAIAAICAA--HDIPHIVNNAYGLQSEECIHKIAA 209 (432)
T ss_pred hHHHHhHHHHHHHHHHhC---CceEEEEeec--ccccCCCCCchHHHHHHHHHc--cCchhhhccccccchHHHHHHHHH
Confidence 348899999887633 3334444322 2222 238999999999 99999999887654311 1
Q ss_pred ccCcccceEEEecCCCcccCCCcceEEE-ecHHHHHHhccC
Q 015729 186 RMDEWGIDVALTGSQKALSLPTGMGIVC-ASPKALEASKTA 225 (401)
Q Consensus 186 ~~~~~~~di~~~s~~K~l~g~~g~G~l~-~~~~~~~~~~~~ 225 (401)
..+...+|.++-|.-|.|..|-|-+++. .++.++..+.++
T Consensus 210 ~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ 250 (432)
T KOG3843|consen 210 AAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKM 250 (432)
T ss_pred HhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHh
Confidence 2223357999999999998777633333 556665555543
No 396
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=87.27 E-value=5.6 Score=30.54 Aligned_cols=89 Identities=16% Similarity=0.172 Sum_probs=57.9
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
.....+..|.++..++.+ .+.+++.+.+.+ .+++++.++... +.......++.+..++...++.+++=+.|
T Consensus 20 la~~l~~~G~~v~~~d~~----~~~~~l~~~~~~---~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~GG~~ 90 (121)
T PF02310_consen 20 LAAYLRKAGHEVDILDAN----VPPEELVEALRA---ERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVVGGPH 90 (121)
T ss_dssp HHHHHHHTTBEEEEEESS----B-HHHHHHHHHH---TTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred HHHHHHHCCCeEEEECCC----CCHHHHHHHHhc---CCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 456677789999888765 356888887766 467888887532 33445667788888776678999988876
Q ss_pred ccCcceeccC-c-ccceEEEe
Q 015729 179 SICAIDFRMD-E-WGIDVALT 197 (401)
Q Consensus 179 ~~~~~~~~~~-~-~~~di~~~ 197 (401)
..... -... . .++|.++.
T Consensus 91 ~t~~~-~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 91 ATADP-EEILREYPGIDYVVR 110 (121)
T ss_dssp SGHHH-HHHHHHHHTSEEEEE
T ss_pred hhcCh-HHHhccCcCcceecC
Confidence 53211 1111 1 46776554
No 397
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=85.30 E-value=30 Score=31.88 Aligned_cols=135 Identities=18% Similarity=0.204 Sum_probs=78.4
Q ss_pred HHHHHHHhccCCCCCeEEEEcCCcchHH----HHHHHHHcCCcEEEEeCCCCCCCCh-----HHHHHHHhccCCCCceEE
Q 015729 71 GAWESALTNTLSPGDRIISFLIGQFSLL----WIDQQQRLNFNVDVVESDWGEGAKL-----DVLASKLAADTAHTIKAI 141 (401)
Q Consensus 71 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~-----~~le~~~~~~~~~~~~~i 141 (401)
..+--+..-+.+.|.+|++....+|--. ...++++.|+.++.-+ ++ -|| ++++.+..+ ...++
T Consensus 154 TTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~--~G--~DpAaVafDAi~~Akar----~~Dvv 225 (340)
T COG0552 154 TTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK--EG--ADPAAVAFDAIQAAKAR----GIDVV 225 (340)
T ss_pred hHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC--CC--CCcHHHHHHHHHHHHHc----CCCEE
Confidence 3444444446678999998877666543 3456778888777654 22 244 566666553 45777
Q ss_pred EEEec---CCCcccccchHHHHHHhhh----cCCCcEEEEecccccCcc----eeccCcccceEEEecCCCcccCCCcce
Q 015729 142 CIVHN---ETATGVTNNLSKVRKLLDE----YRHPALFLVDGVSSICAI----DFRMDEWGIDVALTGSQKALSLPTGMG 210 (401)
Q Consensus 142 ~~~~~---~n~tG~~~~l~~i~~l~~~----~~~~~~li~D~a~~~~~~----~~~~~~~~~di~~~s~~K~l~g~~g~G 210 (401)
++... ||-..-+.++++|.+++++ .||.++++.|++.+--++ .|. +..+.|.++.+ |.=++..| |
T Consensus 226 liDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~-eav~l~GiIlT--KlDgtAKG-G 301 (340)
T COG0552 226 LIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFN-EAVGLDGIILT--KLDGTAKG-G 301 (340)
T ss_pred EEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHH-HhcCCceEEEE--ecccCCCc-c
Confidence 77732 3444444568889999888 245688888987442111 111 22356766665 63333344 4
Q ss_pred EEE-ecHH
Q 015729 211 IVC-ASPK 217 (401)
Q Consensus 211 ~l~-~~~~ 217 (401)
.+. +..+
T Consensus 302 ~il~I~~~ 309 (340)
T COG0552 302 IILSIAYE 309 (340)
T ss_pred eeeeHHHH
Confidence 443 4444
No 398
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=84.71 E-value=9.6 Score=34.82 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=65.8
Q ss_pred EEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC----------------------C
Q 015729 63 FLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE----------------------G 120 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~----------------------~ 120 (401)
..+++||-.-+.+-+...+.-.-.++-+-.+..+..+....+..|++..+++...++ .
T Consensus 31 ~~~~aGGKGINVa~vL~~lG~~~~a~GflGg~tg~~~~~~l~~~gi~~~fv~v~g~TRinvki~~~~~~~~Tein~~Gp~ 110 (310)
T COG1105 31 VTKTAGGKGINVARVLKDLGIPVTALGFLGGFTGEFFVALLKDEGIPDAFVEVKGDTRINVKILDEEDGEETEINFPGPE 110 (310)
T ss_pred ceecCCCCceeHHHHHHHcCCCceEEEecCCccHHHHHHHHHhcCCCceEEEccCCCeeeEEEEecCCCcEEEecCCCCC
Confidence 556677776666555444444344454545555544556667777766666653322 2
Q ss_pred CChHHHHHHH---hccCCCCceEEEEEecCCCcccccc-hHHHHHHhhhcCCCcEEEEeccc
Q 015729 121 AKLDVLASKL---AADTAHTIKAICIVHNETATGVTNN-LSKVRKLLDEYRHPALFLVDGVS 178 (401)
Q Consensus 121 ~d~~~le~~~---~~~~~~~~~~i~~~~~~n~tG~~~~-l~~i~~l~~~~~~~~~li~D~a~ 178 (401)
++.++++..+ +..- .+-.+++++ .+=|.|.-.+ ..+|.++|++ .|..+++|...
T Consensus 111 is~~~~~~~l~~~~~~l-~~~d~Vvls-GSlP~g~~~d~y~~li~~~~~--~g~~vilD~Sg 168 (310)
T COG1105 111 ISEAELEQFLEQLKALL-ESDDIVVLS-GSLPPGVPPDAYAELIRILRQ--QGAKVILDTSG 168 (310)
T ss_pred CCHHHHHHHHHHHHHhc-ccCCEEEEe-CCCCCCCCHHHHHHHHHHHHh--cCCeEEEECCh
Confidence 3444444433 3211 122344444 5666676665 7899999999 99999999763
No 399
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=82.03 E-value=14 Score=35.05 Aligned_cols=95 Identities=9% Similarity=0.049 Sum_probs=61.9
Q ss_pred HHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc--
Q 015729 73 WESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-- 150 (401)
Q Consensus 73 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-- 150 (401)
+.-++..+.+.+ +|+..+-+-....+...++++|+....+.+-..+ +++++.+.+++ .+|+++++..+++..
T Consensus 110 LLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aEt--~~e~I~~~l~~---~~p~lvVIDSIQT~~s~ 183 (456)
T COG1066 110 LLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAET--NLEDIIAELEQ---EKPDLVVIDSIQTLYSE 183 (456)
T ss_pred HHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehhc--CHHHHHHHHHh---cCCCEEEEeccceeecc
Confidence 333444556666 6666655445555666788888755444443333 78888888876 578999998776542
Q ss_pred ------ccccc----hHHHHHHhhhcCCCcEEEEe
Q 015729 151 ------GVTNN----LSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 151 ------G~~~~----l~~i~~l~~~~~~~~~li~D 175 (401)
|.+.- -.++.++||+ +|+.+++=
T Consensus 184 ~~~SapGsVsQVRe~t~~L~~~AK~--~~i~~fiV 216 (456)
T COG1066 184 EITSAPGSVSQVREVAAELMRLAKT--KNIAIFIV 216 (456)
T ss_pred cccCCCCcHHHHHHHHHHHHHHHHH--cCCeEEEE
Confidence 43332 3568999999 88877663
No 400
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=81.49 E-value=51 Score=31.56 Aligned_cols=131 Identities=12% Similarity=0.100 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHhcCCC-----CceE-EecCChh---HHHHHHHhccCCCCCeEEEEcCCcchHH----HHHHHHHcC
Q 015729 41 PALTKTLLEDIKKIFKTTS-----GTPF-LIPTTGT---GAWESALTNTLSPGDRIISFLIGQFSLL----WIDQQQRLN 107 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~-----~~~i-~~~~g~t---~a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~~~g 107 (401)
......+.+.+...++.+. +..+ ++.++|+ ..+..+...+...|.+|.+.+...+... +...++..|
T Consensus 217 ~~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lg 296 (436)
T PRK11889 217 EEVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIG 296 (436)
T ss_pred HHHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcC
Confidence 3455556666666665331 1223 3333332 2222222334456767766665444321 444555667
Q ss_pred CcEEEEeCCCCCCCChHHHHHHHhccCC-CCceEEEEEecCCCcccccchHHHHHHhhh-cCCCcEEEEeccc
Q 015729 108 FNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVS 178 (401)
Q Consensus 108 ~~~~~v~~~~~~~~d~~~le~~~~~~~~-~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~-~~~~~~li~D~a~ 178 (401)
+.+..+. +++++.+.+..... .+...|++..+....-....+.++.++.+. .++.+++++|++.
T Consensus 297 ipv~v~~-------d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~EL~~~lk~~~PdevlLVLsATt 362 (436)
T PRK11889 297 FEVIAVR-------DEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASM 362 (436)
T ss_pred CcEEecC-------CHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHHHHHHHhhcCCCeEEEEECCcc
Confidence 6555432 56677666643210 134677887553322222346677777765 4577888888763
No 401
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=77.16 E-value=18 Score=30.31 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=33.9
Q ss_pred ChHHHHHHHhccCCCCceEEEEEecCCCccccc-chHHHHHHhhh
Q 015729 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTN-NLSKVRKLLDE 165 (401)
Q Consensus 122 d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~-~l~~i~~l~~~ 165 (401)
|++...+.+...++.++.+|+-.+.+|+||... |-..+.++|..
T Consensus 121 dp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 121 DPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred CHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 677777777666644566777778889999886 78889999987
No 402
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=73.79 E-value=66 Score=29.31 Aligned_cols=119 Identities=13% Similarity=0.070 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHhccCCCCC--eEEEEc--CCcchHHHHHHHHHcCCcEEEEeCCC
Q 015729 43 LTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGD--RIISFL--IGQFSLLWIDQQQRLNFNVDVVESDW 117 (401)
Q Consensus 43 ~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~ 117 (401)
...+.++.+++.--.- .+.+++.|.+-+.++..++....+.|. +|++.. |.+-+..+.+..+..|+.+..+...
T Consensus 101 ~~~~a~~~ia~~~a~~i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~Ds- 179 (301)
T COG1184 101 RVEKAKERIAEIGAERIHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVDS- 179 (301)
T ss_pred HHHHHHHHHHHHHHhhccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEech-
Confidence 3445555555432211 223477888777777777766566666 566654 3334444666777788888887633
Q ss_pred CCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch---HHHHHHhhhcCCCcEEEEe
Q 015729 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 118 ~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l---~~i~~l~~~~~~~~~li~D 175 (401)
+.-..+++-. ++++-.+.-...|.+..- -.|+..|++ .++++++=
T Consensus 180 -------a~~~~~~~vd----~VivGad~I~~nG~lvnkiGT~~lA~~A~e--~~~Pf~v~ 227 (301)
T COG1184 180 -------AVGAFMSRVD----KVLVGADAILANGALVNKIGTSPLALAARE--LRVPFYVV 227 (301)
T ss_pred -------HHHHHHHhCC----EEEECccceecCCcEEeccchHHHHHHHHH--hCCCEEEE
Confidence 2222222211 445544444555655542 347777888 77766653
No 403
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=73.31 E-value=32 Score=26.27 Aligned_cols=90 Identities=16% Similarity=0.024 Sum_probs=54.0
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC-CcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH-PALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~-~~~li~D~a 177 (401)
.....+..|.+++... . ...++++.+.+.+ .++.++.++... +-....+.++.+.+++.+. ++.+++=+.
T Consensus 19 ~~~~l~~~G~~V~~lg--~--~~~~~~l~~~~~~---~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~ 89 (119)
T cd02067 19 VARALRDAGFEVIDLG--V--DVPPEEIVEAAKE---EDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGA 89 (119)
T ss_pred HHHHHHHCCCEEEECC--C--CCCHHHHHHHHHH---cCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 4456777888775544 2 2467788777765 467888887532 2234567778888887544 777777665
Q ss_pred cccCcceeccCcccceEEEec
Q 015729 178 SSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 178 ~~~~~~~~~~~~~~~di~~~s 198 (401)
+... .+-.+...|+|.++..
T Consensus 90 ~~~~-~~~~~~~~G~D~~~~~ 109 (119)
T cd02067 90 IVTR-DFKFLKEIGVDAYFGP 109 (119)
T ss_pred CCCh-hHHHHHHcCCeEEECC
Confidence 4322 1112344567766543
No 404
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=72.32 E-value=30 Score=34.26 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=50.8
Q ss_pred HHHHHcC-CcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccc
Q 015729 101 DQQQRLN-FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 101 ~~~~~~g-~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
..++..| .++..++...+ .++.+++.+.+.+ .++.+|.++.. |.......++++.++++..++.||+=+.|+
T Consensus 30 a~L~~~G~~~V~iiD~~~~-~~~~~~~~~~l~~---~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 30 GALLDAGYHDVTFLDAMTG-PLTDEKLVERLRA---HCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred HHHHhcCCcceEEeccccc-CCCHHHHHHHHHh---cCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 4456678 58888876543 3567888887765 35788888642 334455677888888855699999988876
Q ss_pred c
Q 015729 180 I 180 (401)
Q Consensus 180 ~ 180 (401)
.
T Consensus 103 t 103 (497)
T TIGR02026 103 T 103 (497)
T ss_pred C
Confidence 4
No 405
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=71.42 E-value=64 Score=27.49 Aligned_cols=125 Identities=10% Similarity=0.084 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEe--cCChhHHHHHHHhcc---C---C--CCCeEEEEcC--CcchHH---HHHHHHH
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLI--PTTGTGAWESALTNT---L---S--PGDRIISFLI--GQFSLL---WIDQQQR 105 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~--~~g~t~a~~~~~~~~---~---~--~gd~vl~~~~--~~~~~~---~~~~~~~ 105 (401)
.+.....-+.+.+.|.... +.+ ..=+++.+...+..+ + . ++.+|++... +.|... ...+.+.
T Consensus 32 ~~~l~p~m~~vG~~w~~~~---i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~ 108 (201)
T cd02070 32 EEGLAPGMDIVGDKYEEGE---IFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEA 108 (201)
T ss_pred HHHHHHHHHHHHHHHccCC---eeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHH
Confidence 3555666677777776543 211 112233333333221 1 1 2345555443 333332 4567788
Q ss_pred cCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCC--CcEEEEecc
Q 015729 106 LNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH--PALFLVDGV 177 (401)
Q Consensus 106 ~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~--~~~li~D~a 177 (401)
.|.+++..-.+ ..++++.+.+.+ .++.+|.++...+ .....+.++.+..++.+. ++.|++=+.
T Consensus 109 ~G~~vi~lG~~----~p~~~l~~~~~~---~~~d~v~lS~~~~--~~~~~~~~~i~~lr~~~~~~~~~i~vGG~ 173 (201)
T cd02070 109 NGFEVIDLGRD----VPPEEFVEAVKE---HKPDILGLSALMT--TTMGGMKEVIEALKEAGLRDKVKVMVGGA 173 (201)
T ss_pred CCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEecccc--ccHHHHHHHHHHHHHCCCCcCCeEEEECC
Confidence 89888655422 468888887776 4678888885432 234567888777777433 677776654
No 406
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=70.53 E-value=60 Score=27.06 Aligned_cols=120 Identities=15% Similarity=0.060 Sum_probs=62.7
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHH-------------
Q 015729 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQR------------- 105 (401)
Q Consensus 39 ~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~------------- 105 (401)
.+...+.+..+.+.+..+.+..+--.+.-|+|.+.++++.. +|.+|-+...+-|.... ...+.
T Consensus 34 d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT~~tNAl~e~---~g~~v~li~~~G~~d~l-~~~~~~~~~~~~~~~~lv 109 (176)
T PF05378_consen 34 DPAEGILEALDALLEESGIDPSDIDRVRHGTTVATNALLER---KGARVGLITTGGFGDVL-EIGRQWRPDLFDLQDPLV 109 (176)
T ss_pred CHHHHHHHHHHhhhcccCCChhhCcEEEeccHHHHHHHHhc---cCCCceEEeccCcHhhc-chhhccCCcccccccccc
Confidence 34445555555555555554433235677889999988765 33444333332232210 00000
Q ss_pred cCCcEEEEe--CCCC----CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch--HHHHHHhhh
Q 015729 106 LNFNVDVVE--SDWG----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL--SKVRKLLDE 165 (401)
Q Consensus 106 ~g~~~~~v~--~~~~----~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l--~~i~~l~~~ 165 (401)
..-.+..+. ++.+ ..+|.+++++.+.+.....++.+.++..+++ ..|. .++.+++++
T Consensus 110 ~~~~~~~v~gr~~~~G~~i~~ld~~~v~~~~~~l~~~gv~avAV~~~fS~---~np~hE~~v~eii~e 174 (176)
T PF05378_consen 110 PRERVFEVDGRIDADGEVIEPLDEDEVREALRELKDKGVEAVAVSLLFSY---RNPEHEQRVAEIIRE 174 (176)
T ss_pred cccCEEEECCccccCcEEecCCCHHHHHHHHHHHHhCCCCEEEEECccCC---CCHHHHHHHHHHHHh
Confidence 011222233 1222 2468888988887654345788888866543 3443 346777766
No 407
>PRK00394 transcription factor; Reviewed
Probab=69.61 E-value=66 Score=26.92 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-----C-CCcE-E------EEe
Q 015729 283 KATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-----V-AGKV-F------RIG 349 (401)
Q Consensus 283 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-----~-~~~~-~------Ri~ 349 (401)
+.+.+.|+++|+++.....-.-.+.+....++..++-+.++..+--+ +....|-.++ . .++. + ++.
T Consensus 73 ~~~~~~l~~~g~~~~~~~~~~i~NiVas~~l~~~i~L~~la~~~~~~-~~~YePe~fPglvyR~~~pk~~~lIF~SGKvv 151 (179)
T PRK00394 73 KIIIKKLKELGIKVIDEPEIKVQNIVASADLGVELNLNAIAIGLGLE-NIEYEPEQFPGLVYRLDDPKVVVLLFGSGKLV 151 (179)
T ss_pred HHHHHHHHHcCCCccCCCceEEEEEEEEEEcCCeEcHHHHHHhcCcC-CcEECcccCceEEEEecCCcEEEEEEcCCEEE
Confidence 34555566777765421111123445556666666766776655101 3333332211 0 0111 1 233
Q ss_pred ecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 350 HLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 350 ~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.+.-+++|+..+++.|...++++|.
T Consensus 152 itGaks~~~~~~a~~~i~~~l~~~g~ 177 (179)
T PRK00394 152 ITGAKSEEDAEKAVEKILEKLEELGL 177 (179)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHcCC
Confidence 45567899999999999999988765
No 408
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=67.98 E-value=72 Score=29.86 Aligned_cols=125 Identities=14% Similarity=0.038 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHhcCCC--CceEEecCChhHHHHHHHhccCCCCCeE--EEEcCCcchHH----HHHHHHHcCCcEE
Q 015729 40 VPALTKTLLEDIKKIFKTTS--GTPFLIPTTGTGAWESALTNTLSPGDRI--ISFLIGQFSLL----WIDQQQRLNFNVD 111 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~--~~~i~~~~g~t~a~~~~~~~~~~~gd~v--l~~~~~~~~~~----~~~~~~~~g~~~~ 111 (401)
+.+...++++.+.++-+... -+.++..+||-....++....-.-|.++ +..++++.+.. ...+++..|+...
T Consensus 38 ~~~~~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~ 117 (343)
T TIGR03573 38 WDEREKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLH 117 (343)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeE
Confidence 44455566666665544322 3346668888776654421111123333 45556554321 4566777898888
Q ss_pred EEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccc
Q 015729 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 112 ~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
.+..+ ++.+.+.+.... + -...+..+.. ......+.++|++ +|+.+|+.+.++
T Consensus 118 ~i~~d------~~~~~~l~~~~~----~--~~~~pc~~c~-~~~~~~l~~~A~~--~gi~~Il~G~~~ 170 (343)
T TIGR03573 118 TITIN------PETFRKLQRAYF----K--KVGDPEWPQD-HAIFASVYQVALK--FNIPLIIWGENI 170 (343)
T ss_pred EEeCC------HHHHHHHHHHHH----h--ccCCCchhhh-hHHHHHHHHHHHH--hCCCEEEeCCCH
Confidence 87754 444443332200 1 0011111111 1224678889999 999999987654
No 409
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=67.26 E-value=39 Score=28.95 Aligned_cols=113 Identities=14% Similarity=0.043 Sum_probs=61.0
Q ss_pred eEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
.+++.+||..|...+ ..++..|-+|.+.++... .....+.+. | ++..+.-+ ++.+. +. . ..+
T Consensus 11 ~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~-~~l~~l~~~-~-~i~~~~~~----~~~~d----l~-----~-~~l 72 (205)
T TIGR01470 11 AVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELE-SELTLLAEQ-G-GITWLARC----FDADI----LE-----G-AFL 72 (205)
T ss_pred eEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCC-HHHHHHHHc-C-CEEEEeCC----CCHHH----hC-----C-cEE
Confidence 478888888887654 566777888888877433 333344433 3 45555432 22332 22 1 233
Q ss_pred EEEecCCCcccccchHHHHHHhhhcCCCcEEE-Eeccc-ccCcceeccCcccceEEEec
Q 015729 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFL-VDGVS-SICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 142 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li-~D~a~-~~~~~~~~~~~~~~di~~~s 198 (401)
++.. ||....-..|.+.|++ .++++- +|+.. +.+.+|.-....+..+.++|
T Consensus 73 Vi~a----t~d~~ln~~i~~~a~~--~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT 125 (205)
T TIGR01470 73 VIAA----TDDEELNRRVAHAARA--RGVPVNVVDDPELCSFIFPSIVDRSPVVVAISS 125 (205)
T ss_pred EEEC----CCCHHHHHHHHHHHHH--cCCEEEECCCcccCeEEEeeEEEcCCEEEEEEC
Confidence 3333 3333345679999999 888773 45432 22333433444344444444
No 410
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=67.11 E-value=29 Score=26.34 Aligned_cols=72 Identities=10% Similarity=0.051 Sum_probs=43.6
Q ss_pred CeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhh
Q 015729 85 DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (401)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~ 164 (401)
++|++...|-........++..|++++.+..+++..- . -.+..+ +++.+. +....-...+++.|.++++
T Consensus 3 kkvLIanrGeia~r~~ra~r~~Gi~tv~v~s~~d~~s-~--~~~~ad-------~~~~~~-~~~~~~~yl~~e~I~~ia~ 71 (110)
T PF00289_consen 3 KKVLIANRGEIAVRIIRALRELGIETVAVNSNPDTVS-T--HVDMAD-------EAYFEP-PGPSPESYLNIEAIIDIAR 71 (110)
T ss_dssp SEEEESS-HHHHHHHHHHHHHTTSEEEEEEEGGGTTG-H--HHHHSS-------EEEEEE-SSSGGGTTTSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCcceeccCchhccc-c--cccccc-------cceecC-cchhhhhhccHHHHhhHhh
Confidence 3567766666666666778888998888887655311 1 111111 344444 3344445568899999999
Q ss_pred hcCCC
Q 015729 165 EYRHP 169 (401)
Q Consensus 165 ~~~~~ 169 (401)
+ .+
T Consensus 72 ~--~g 74 (110)
T PF00289_consen 72 K--EG 74 (110)
T ss_dssp H--TT
T ss_pred h--hc
Confidence 8 64
No 411
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=65.19 E-value=78 Score=26.14 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=21.9
Q ss_pred ecccCCHHHHHHHHHHHHHHHHhcCC
Q 015729 350 HLGHLNELQLLGCLAGVEMILKDVGY 375 (401)
Q Consensus 350 ~~~~~~~~di~~~~~~i~~~l~~~~~ 375 (401)
+.+.-+++|.+++++.+..-++++|+
T Consensus 159 iTGaK~~ed~~~Av~~i~~~L~elgl 184 (185)
T COG2101 159 ITGAKSEEDAEQAVEKIQSRLEELGL 184 (185)
T ss_pred EecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 44556899999999999999998874
No 412
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=63.84 E-value=34 Score=29.68 Aligned_cols=93 Identities=16% Similarity=0.125 Sum_probs=48.2
Q ss_pred EecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEE
Q 015729 64 LIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICI 143 (401)
Q Consensus 64 ~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~ 143 (401)
++..+|..+-.. +.+++.++-+|.+......+. .....+..|++++..+.+ |.+.|.++++. ...+++
T Consensus 3 V~GatG~~G~~v-~~~L~~~~~~V~~l~R~~~~~-~~~~l~~~g~~vv~~d~~-----~~~~l~~al~g-----~d~v~~ 70 (233)
T PF05368_consen 3 VTGATGNQGRSV-VRALLSAGFSVRALVRDPSSD-RAQQLQALGAEVVEADYD-----DPESLVAALKG-----VDAVFS 70 (233)
T ss_dssp EETTTSHHHHHH-HHHHHHTTGCEEEEESSSHHH-HHHHHHHTTTEEEES-TT------HHHHHHHHTT-----CSEEEE
T ss_pred EECCccHHHHHH-HHHHHhCCCCcEEEEeccchh-hhhhhhcccceEeecccC-----CHHHHHHHHcC-----CceEEe
Confidence 333445544332 244444666666655422222 223455678877655444 89999999974 345555
Q ss_pred EecCCCcccccchHHHHHHhhhcCCCc
Q 015729 144 VHNETATGVTNNLSKVRKLLDEYRHPA 170 (401)
Q Consensus 144 ~~~~n~tG~~~~l~~i~~l~~~~~~~~ 170 (401)
..+........--..+.+.|++ .|+
T Consensus 71 ~~~~~~~~~~~~~~~li~Aa~~--agV 95 (233)
T PF05368_consen 71 VTPPSHPSELEQQKNLIDAAKA--AGV 95 (233)
T ss_dssp ESSCSCCCHHHHHHHHHHHHHH--HT-
T ss_pred ecCcchhhhhhhhhhHHHhhhc--ccc
Confidence 5443322222234557777777 555
No 413
>PLN02476 O-methyltransferase
Probab=62.51 E-value=1.2e+02 Score=27.41 Aligned_cols=125 Identities=13% Similarity=0.058 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEe--cCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCc--EEEEeCC
Q 015729 42 ALTKTLLEDIKKIFKTTSGTPFLI--PTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFN--VDVVESD 116 (401)
Q Consensus 42 ~~~~~l~~~la~~~g~~~~~~i~~--~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~--~~~v~~~ 116 (401)
....++...+.+..+.+. ++= |..|..++.++ ..+.++.+|+..+....... .....+..|.+ +..+.-+
T Consensus 104 ~~~g~lL~~L~~~~~ak~---VLEIGT~tGySal~lA--~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 104 PDQAQLLAMLVQILGAER---CIEVGVYTGYSSLAVA--LVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred HHHHHHHHHHHHhcCCCe---EEEecCCCCHHHHHHH--HhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 334456666666655443 433 33334444332 23455556676665322222 33444556663 3333211
Q ss_pred CCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 117 ~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
-.+.|.+...+.......++++...- .....-++.+.++.+ .|.+|++|.+...|
T Consensus 179 -----A~e~L~~l~~~~~~~~FD~VFIDa~K--~~Y~~y~e~~l~lL~---~GGvIV~DNvL~~G 233 (278)
T PLN02476 179 -----AAESLKSMIQNGEGSSYDFAFVDADK--RMYQDYFELLLQLVR---VGGVIVMDNVLWHG 233 (278)
T ss_pred -----HHHHHHHHHhcccCCCCCEEEECCCH--HHHHHHHHHHHHhcC---CCcEEEEecCccCC
Confidence 23444443322111356788888642 112222444444443 67778889886554
No 414
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=62.50 E-value=97 Score=26.70 Aligned_cols=116 Identities=15% Similarity=0.084 Sum_probs=64.0
Q ss_pred eEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
.+++.+||..|.--+ ..+++.|.+|.+..+.. ......+.+..++ ..+. ..++++.+.. ..+
T Consensus 14 ~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~-~~el~~~~~~~~i--~~~~----~~~~~~~~~~----------~~l 75 (210)
T COG1648 14 KVLVVGGGSVALRKA-RLLLKAGADVTVVSPEF-EPELKALIEEGKI--KWIE----REFDAEDLDD----------AFL 75 (210)
T ss_pred EEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCc-cHHHHHHHHhcCc--chhh----cccChhhhcC----------ceE
Confidence 488889999888754 56788899999998865 3334444554442 2222 1234444332 233
Q ss_pred EEEecCCCcccccchHHHHHHhhhcCCCcEEEE-eccc-ccCcceeccCcccceEEEecCCC
Q 015729 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFLV-DGVS-SICAIDFRMDEWGIDVALTGSQK 201 (401)
Q Consensus 142 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~-D~a~-~~~~~~~~~~~~~~di~~~s~~K 201 (401)
++...++ ..--++|.+.|++ +++++-+ |... +...+|.-.+..+.-+.++|..|
T Consensus 76 viaAt~d----~~ln~~i~~~a~~--~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G~ 131 (210)
T COG1648 76 VIAATDD----EELNERIAKAARE--RRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGGK 131 (210)
T ss_pred EEEeCCC----HHHHHHHHHHHHH--hCCceeccCCcccCceecceeeccCCeEEEEECCCC
Confidence 3332222 2234679999999 7775543 4332 22234444444445555555433
No 415
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=62.02 E-value=57 Score=32.85 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=57.3
Q ss_pred HHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHH
Q 015729 53 KIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKL 130 (401)
Q Consensus 53 ~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~ 130 (401)
..+...+.--++.|+||.....-+ -+++.+|-.++++.. -+.+ --...+..|++...+... ++.++-...+
T Consensus 28 ~~l~g~d~lvvmPTGgGKSlCyQi-PAll~~G~TLVVSPL--iSLM~DQV~~l~~~Gi~A~~lnS~----l~~~e~~~v~ 100 (590)
T COG0514 28 ALLSGKDTLVVMPTGGGKSLCYQI-PALLLEGLTLVVSPL--ISLMKDQVDQLEAAGIRAAYLNST----LSREERQQVL 100 (590)
T ss_pred HHHcCCcEEEEccCCCCcchHhhh-HHHhcCCCEEEECch--HHHHHHHHHHHHHcCceeehhhcc----cCHHHHHHHH
Confidence 333344444356677877766544 355557755555433 4433 123445567655554433 2343333333
Q ss_pred hccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEeccccc
Q 015729 131 AADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI 180 (401)
Q Consensus 131 ~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~ 180 (401)
..-...+.++++++.=. ...+ .+.+..++. .-.++++|+||..
T Consensus 101 ~~l~~g~~klLyisPEr----l~~~--~f~~~L~~~-~i~l~vIDEAHCi 143 (590)
T COG0514 101 NQLKSGQLKLLYISPER----LMSP--RFLELLKRL-PISLVAIDEAHCI 143 (590)
T ss_pred HHHhcCceeEEEECchh----hcCh--HHHHHHHhC-CCceEEechHHHH
Confidence 22111457888887321 1111 222222231 5568999999974
No 416
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=60.46 E-value=12 Score=30.59 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=38.7
Q ss_pred ChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 122 d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
|..++++.++.+ ...+++- +|.+..++++.+..++++..+++++|-..+..
T Consensus 12 ~~~~le~~les~----~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESE----SQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCC----CeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 567888888753 3455444 46789999999999996677899999776654
No 417
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=60.40 E-value=25 Score=33.19 Aligned_cols=63 Identities=21% Similarity=0.190 Sum_probs=41.4
Q ss_pred cEEEEeCCCCCC-CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEec
Q 015729 109 NVDVVESDWGEG-AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (401)
Q Consensus 109 ~~~~v~~~~~~~-~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~ 176 (401)
++..++.++... .+...+-+.+++.- .+.++++++- +--|.+.+.+.+.++|++ .|+++++|-
T Consensus 115 QllRvD~Ee~~~~~~~~~ll~~~~~~l-~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~--~~~pVLvDP 178 (467)
T COG2870 115 QLLRLDFEEKFPIEDENKLLEKIKNAL-KSFDALVLSD--YAKGVLTNVQKMIDLARE--AGIPVLVDP 178 (467)
T ss_pred eEEEecccccCcchhHHHHHHHHHHHh-hcCCEEEEec--cccccchhHHHHHHHHHH--cCCcEEECC
Confidence 445555443322 23344444443311 2467888874 568999999999999999 999999993
No 418
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=60.31 E-value=1.1e+02 Score=26.22 Aligned_cols=127 Identities=17% Similarity=0.186 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEe--cCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCC--cEEEEe
Q 015729 40 VPALTKTLLEDIKKIFKTTSGTPFLI--PTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNF--NVDVVE 114 (401)
Q Consensus 40 ~~~~~~~l~~~la~~~g~~~~~~i~~--~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~--~~~~v~ 114 (401)
......++...+.+..+.+. ++- |..|..++.. ...+.++.+|++.+....... .....+..|. ++..+.
T Consensus 29 i~~~~g~lL~~l~~~~~~k~---vLEIGt~~GySal~l--a~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~ 103 (205)
T PF01596_consen 29 ISPETGQLLQMLVRLTRPKR---VLEIGTFTGYSALWL--AEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE 103 (205)
T ss_dssp HHHHHHHHHHHHHHHHT-SE---EEEESTTTSHHHHHH--HHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE
T ss_pred cCHHHHHHHHHHHHhcCCce---EEEeccccccHHHHH--HHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 34445567777777776554 443 3344444443 334566668888876432222 3345565665 455444
Q ss_pred CCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 115 SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 115 ~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
-+ -.+.+.+...+.......+|++... .......++.+.++.+ .|.+|++|.+-..|
T Consensus 104 gd-----a~~~l~~l~~~~~~~~fD~VFiDa~--K~~y~~y~~~~~~ll~---~ggvii~DN~l~~G 160 (205)
T PF01596_consen 104 GD-----ALEVLPELANDGEEGQFDFVFIDAD--KRNYLEYFEKALPLLR---PGGVIIADNVLWRG 160 (205)
T ss_dssp S------HHHHHHHHHHTTTTTSEEEEEEEST--GGGHHHHHHHHHHHEE---EEEEEEEETTTGGG
T ss_pred ec-----cHhhHHHHHhccCCCceeEEEEccc--ccchhhHHHHHhhhcc---CCeEEEEccccccc
Confidence 22 2455566555432125788888863 2223333555666555 57889999876544
No 419
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=59.20 E-value=1.1e+02 Score=26.59 Aligned_cols=113 Identities=17% Similarity=0.235 Sum_probs=59.8
Q ss_pred eEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEE
Q 015729 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i 141 (401)
.+++.+||..|..-+ ..+++-|.+|.+..|..... ...++... ++..+.-+ +++++++ . ..+
T Consensus 27 ~VLVVGGG~VA~RK~-~~Ll~~gA~VtVVap~i~~e-l~~l~~~~--~i~~~~r~----~~~~dl~---------g-~~L 88 (223)
T PRK05562 27 KVLIIGGGKAAFIKG-KTFLKKGCYVYILSKKFSKE-FLDLKKYG--NLKLIKGN----YDKEFIK---------D-KHL 88 (223)
T ss_pred EEEEECCCHHHHHHH-HHHHhCCCEEEEEcCCCCHH-HHHHHhCC--CEEEEeCC----CChHHhC---------C-CcE
Confidence 488899999987654 56677888888888864433 23333322 34444422 3444432 1 233
Q ss_pred EEEecCCCcccccchHHHHHHhhhcCCCcEEE-Eecc-cccCcceeccCcccceEEEec
Q 015729 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFL-VDGV-SSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 142 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li-~D~a-~~~~~~~~~~~~~~~di~~~s 198 (401)
++.. |+...=-+.|.+.|++ .++++. +|.. .+.+..|.-....+..+.++|
T Consensus 89 ViaA----TdD~~vN~~I~~~a~~--~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 89 IVIA----TDDEKLNNKIRKHCDR--LYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred EEEC----CCCHHHHHHHHHHHHH--cCCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence 3332 1111224679999998 776554 4543 222233333333334444444
No 420
>KOG1663 consensus O-methyltransferase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=58.55 E-value=1.3e+02 Score=26.35 Aligned_cols=152 Identities=14% Similarity=0.133 Sum_probs=77.9
Q ss_pred CcCChHHHHHHHccCcCCCCCccHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcch
Q 015729 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (401)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~ 96 (401)
+.+.-.++.++...............-.-.+-+++-+.++.+..-.+=+.. |-.|+. +...+.++.+|+..+-.+.+
T Consensus 34 e~~~l~el~e~t~~~~~~~~~m~v~~d~g~fl~~li~~~~ak~~lelGvfT-GySaL~--~Alalp~dGrv~a~eid~~~ 110 (237)
T KOG1663|consen 34 EPELLKELREATLTYPQPGSEMLVGPDKGQFLQMLIRLLNAKRTLELGVFT-GYSALA--VALALPEDGRVVAIEIDADA 110 (237)
T ss_pred CcHHHHHHHHHHhhcCCcccceecChHHHHHHHHHHHHhCCceEEEEeccc-CHHHHH--HHHhcCCCceEEEEecChHH
Confidence 333444445554443211112222333446677777888877632121111 222222 23346667788887664444
Q ss_pred HH-HHHHHHHcCC--cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEE
Q 015729 97 LL-WIDQQQRLNF--NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 97 ~~-~~~~~~~~g~--~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li 173 (401)
+. ...+.+..|+ ++..+.-+ ..+.|.+.+.+........+++.+-= .-.....++..++.+ .|.+|+
T Consensus 111 ~~~~~~~~k~agv~~KI~~i~g~-----a~esLd~l~~~~~~~tfDfaFvDadK--~nY~~y~e~~l~Llr---~GGvi~ 180 (237)
T KOG1663|consen 111 YEIGLELVKLAGVDHKITFIEGP-----ALESLDELLADGESGTFDFAFVDADK--DNYSNYYERLLRLLR---VGGVIV 180 (237)
T ss_pred HHHhHHHHHhccccceeeeeecc-----hhhhHHHHHhcCCCCceeEEEEccch--HHHHHHHHHHHhhcc---cccEEE
Confidence 43 2344455554 44444322 46677777665332345566766531 111234666777766 588899
Q ss_pred EecccccC
Q 015729 174 VDGVSSIC 181 (401)
Q Consensus 174 ~D~a~~~~ 181 (401)
+|.+-..|
T Consensus 181 ~DNvl~~G 188 (237)
T KOG1663|consen 181 VDNVLWPG 188 (237)
T ss_pred EeccccCC
Confidence 99876655
No 421
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=56.79 E-value=1.2e+02 Score=27.04 Aligned_cols=74 Identities=12% Similarity=0.042 Sum_probs=36.0
Q ss_pred CeEEEEcCCcch-HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHH
Q 015729 85 DRIISFLIGQFS-LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKV 159 (401)
Q Consensus 85 d~vl~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i 159 (401)
|.+++++...-- ..+...++..|+.++.+-.. . .+.+.+++..... ...+++...+..||...+ ++++
T Consensus 124 dGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaP-t--t~~~rl~~i~~~a----~GFiY~vs~~GvTG~~~~~~~~~~~~ 196 (265)
T COG0159 124 DGLLVPDLPPEESDELLKAAEKHGIDPIFLVAP-T--TPDERLKKIAEAA----SGFIYYVSRMGVTGARNPVSADVKEL 196 (265)
T ss_pred CEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCC-C--CCHHHHHHHHHhC----CCcEEEEecccccCCCcccchhHHHH
Confidence 556666642111 12445566666666655322 1 1445555554421 134555555566666654 3444
Q ss_pred HHHhhh
Q 015729 160 RKLLDE 165 (401)
Q Consensus 160 ~~l~~~ 165 (401)
.+..|+
T Consensus 197 v~~vr~ 202 (265)
T COG0159 197 VKRVRK 202 (265)
T ss_pred HHHHHH
Confidence 444444
No 422
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=56.42 E-value=1.4e+02 Score=26.16 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc------hHHHHHHhhhcCCCc
Q 015729 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN------LSKVRKLLDEYRHPA 170 (401)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~------l~~i~~l~~~~~~~~ 170 (401)
.......+..|+++ .+-+++++ .++.++..+..-. .+++++....-.|...- +.++.++.++++.++
T Consensus 98 ~~~i~~Ik~~G~ka-GlalnP~T--~~~~l~~~l~~vD----~VLvMsV~PGf~GQ~fi~~~l~KI~~lr~~~~~~~~~~ 170 (229)
T PRK09722 98 FRLIDEIRRAGMKV-GLVLNPET--PVESIKYYIHLLD----KITVMTVDPGFAGQPFIPEMLDKIAELKALRERNGLEY 170 (229)
T ss_pred HHHHHHHHHcCCCE-EEEeCCCC--CHHHHHHHHHhcC----EEEEEEEcCCCcchhccHHHHHHHHHHHHHHHhcCCCe
Confidence 33456667788765 45566665 5788888876421 34455544444565542 344555555544568
Q ss_pred EEEEecccccCcceeccCcccceEEEecC
Q 015729 171 LFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (401)
Q Consensus 171 ~li~D~a~~~~~~~~~~~~~~~di~~~s~ 199 (401)
.|-+|+--..... ....+.|+|+++.++
T Consensus 171 ~IeVDGGI~~~~i-~~~~~aGad~~V~Gs 198 (229)
T PRK09722 171 LIEVDGSCNQKTY-EKLMEAGADVFIVGT 198 (229)
T ss_pred EEEEECCCCHHHH-HHHHHcCCCEEEECh
Confidence 8999963211111 123355788877553
No 423
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=56.40 E-value=99 Score=29.34 Aligned_cols=89 Identities=9% Similarity=0.074 Sum_probs=48.8
Q ss_pred ccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc--------
Q 015729 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-------- 150 (401)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t-------- 150 (401)
...+.|.+|+..+.+.........+++.|.....+..... .+++.+.+.+++ .+++++++...++..
T Consensus 105 ~~a~~g~~VlYvs~EEs~~qi~~Ra~rlg~~~~~l~l~~e--~~le~I~~~i~~---~~~~lVVIDSIq~l~~~~~~~~~ 179 (372)
T cd01121 105 RLAKRGGKVLYVSGEESPEQIKLRADRLGISTENLYLLAE--TNLEDILASIEE---LKPDLVIIDSIQTVYSSELTSAP 179 (372)
T ss_pred HHHhcCCeEEEEECCcCHHHHHHHHHHcCCCcccEEEEcc--CcHHHHHHHHHh---cCCcEEEEcchHHhhccccccCC
Confidence 3445556676655433333333445556653332222111 367788887765 467899999876542
Q ss_pred ccccc----hHHHHHHhhhcCCCcEEEE
Q 015729 151 GVTNN----LSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 151 G~~~~----l~~i~~l~~~~~~~~~li~ 174 (401)
|.... +..+.+++++ +|+.+++
T Consensus 180 g~~~qvr~~~~~L~~lak~--~~itvil 205 (372)
T cd01121 180 GSVSQVRECTAELMRFAKE--RNIPIFI 205 (372)
T ss_pred CCHHHHHHHHHHHHHHHHH--cCCeEEE
Confidence 11111 3457788998 7775543
No 424
>cd04518 TBP_archaea archaeal TATA box binding protein (TBP): TBPs are transcription factors present in archaea and eukaryotes, that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA.
Probab=56.25 E-value=1.2e+02 Score=25.29 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-----CC-CcE-E------EEee
Q 015729 284 ATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-----VA-GKV-F------RIGH 350 (401)
Q Consensus 284 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~-----~~-~~~-~------Ri~~ 350 (401)
.+.+.|+++|++......-.-.+.+..+.++..++-+.++..+. +....|..++ .. ++. + ++.+
T Consensus 75 ~~~~~L~~~g~~~~~~~~~~i~NIVas~~l~~~i~L~~la~~~~---~~~YePe~fpglvyR~~~pk~~~lIF~SGKvvi 151 (174)
T cd04518 75 EIIKKLKDYGIKVIEKPEIKVQNIVASADLGREVNLDAIAIGLP---NAEYEPEQFPGLVYRLDEPKVVLLLFSSGKMVI 151 (174)
T ss_pred HHHHHHHhcCCCccCCCceEEEEEEEEEEcCCccCHHHHHhhCC---CCccCcccCceEEEEecCCcEEEEEeCCCEEEE
Confidence 34555666776654211111234455566766677667765442 2332222111 00 110 1 2234
Q ss_pred cccCCHHHHHHHHHHHHHHHHh
Q 015729 351 LGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 351 ~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.+.-+.+|+..+++.|...|++
T Consensus 152 tGaks~~~~~~a~~~i~~~l~~ 173 (174)
T cd04518 152 TGAKSEEDAKRAVEKLLSRLKE 173 (174)
T ss_pred EecCCHHHHHHHHHHHHHHHhh
Confidence 4557899999999988877764
No 425
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=56.19 E-value=70 Score=31.13 Aligned_cols=87 Identities=9% Similarity=0.066 Sum_probs=55.4
Q ss_pred EEEEcCCcchHHHHHHHHHcCCcEEEEe--CCC-----CCCCChHHHHHHHhccCC--CCceEEEEEecCCCcccccchH
Q 015729 87 IISFLIGQFSLLWIDQQQRLNFNVDVVE--SDW-----GEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNNLS 157 (401)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~--~~~-----~~~~d~~~le~~~~~~~~--~~~~~i~~~~~~n~tG~~~~l~ 157 (401)
+.++.. .+.....-.++.+|+..+.+. .+. .+++|...+++.++++-+ ++|-+++-....+..|...-+-
T Consensus 234 ~YiS~a-lh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~ 312 (838)
T KOG0630|consen 234 FYISEA-LHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMIL 312 (838)
T ss_pred EEEccc-ccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHH
Confidence 444433 333333346788887433332 222 357899999999987432 3444445555567788888899
Q ss_pred HHHHHhhhcCCC-cEEEEec
Q 015729 158 KVRKLLDEYRHP-ALFLVDG 176 (401)
Q Consensus 158 ~i~~l~~~~~~~-~~li~D~ 176 (401)
+|.++|++ ++ .|++.-+
T Consensus 313 kildi~ea--hakfWLHasG 330 (838)
T KOG0630|consen 313 KILDICEA--HAKFWLHASG 330 (838)
T ss_pred HHHHHHHH--hhheeEeecc
Confidence 99999999 55 7888753
No 426
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=52.69 E-value=2.3e+02 Score=27.50 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=47.1
Q ss_pred CCCCCeEEEEcCCcchHH--H--HHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 81 LSPGDRIISFLIGQFSLL--W--IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~--~--~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
...|.+|.+.+...+... + ...++..|+.+..+ .++..+.+.+.. .....|++..+..+.-....+
T Consensus 249 ~~~G~~V~Lit~Dt~R~aA~eQLk~yAe~lgvp~~~~-------~~~~~l~~~l~~---~~~D~VLIDTaGr~~rd~~~l 318 (432)
T PRK12724 249 LHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYPV-------KDIKKFKETLAR---DGSELILIDTAGYSHRNLEQL 318 (432)
T ss_pred HhcCCeEEEecccchhhhHHHHHHHHHHhcCCCeeeh-------HHHHHHHHHHHh---CCCCEEEEeCCCCCccCHHHH
Confidence 456777877766444332 1 22334445433221 134455555543 235678888543332233446
Q ss_pred HHHHHHhhh----cCCCcEEEEecccc
Q 015729 157 SKVRKLLDE----YRHPALFLVDGVSS 179 (401)
Q Consensus 157 ~~i~~l~~~----~~~~~~li~D~a~~ 179 (401)
+++.++.+. .+..+++++|++..
T Consensus 319 ~eL~~~~~~~~~~~~~e~~LVLsAt~~ 345 (432)
T PRK12724 319 ERMQSFYSCFGEKDSVENLLVLSSTSS 345 (432)
T ss_pred HHHHHHHHhhcCCCCCeEEEEEeCCCC
Confidence 666666553 13568899998754
No 427
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=51.78 E-value=68 Score=23.37 Aligned_cols=79 Identities=16% Similarity=0.030 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCccccCCCc-cCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEE
Q 015729 270 GLENVIERHRRLGKATRLAVEAWGLKNCTQKEE-WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRI 348 (401)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~~~~~~Ri 348 (401)
|++...+. .++.+.+++.+++.|.++...... .....+..++.|+...+..+.-.+.. .+.+|.
T Consensus 11 g~~~~~~~-~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~--------------~G~v~~ 75 (91)
T PF08734_consen 11 GAKGIKDS-PDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRS--------------SGNVRT 75 (91)
T ss_pred HHHHHhhc-HHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHc--------------CCceEE
Confidence 43434443 566667777777788776542110 02345666778753222233322221 233444
Q ss_pred eecccCCHHHHHHHH
Q 015729 349 GHLGHLNELQLLGCL 363 (401)
Q Consensus 349 ~~~~~~~~~di~~~~ 363 (401)
-....++.+|+.+++
T Consensus 76 et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 76 ETLRAFPWDEFDEIV 90 (91)
T ss_pred EEEecCCHHHHHHHh
Confidence 444456888887765
No 428
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=51.39 E-value=59 Score=30.08 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=56.2
Q ss_pred ChHHHHHHHhccC-CCCceEEEEEecCCCcccccchHHHHHHhhhcC--CCcEEEEecccccCcceeccCcccceEEEec
Q 015729 122 KLDVLASKLAADT-AHTIKAICIVHNETATGVTNNLSKVRKLLDEYR--HPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 122 d~~~le~~~~~~~-~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
+.+.+++.++.-. +++++.|++. .++|-|.+..-+.|.+..+++. .-+++.++...+.|.... ...+|=++.+
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY~I---A~aAd~I~a~ 156 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGYYI---ALAADKIVAD 156 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhhhh---hccCCEEEec
Confidence 4555555444311 1356777776 4789999987666665555532 247777776544444333 2346777777
Q ss_pred CCCcccCCCcceEEEecHHHHHHhcc
Q 015729 199 SQKALSLPTGMGIVCASPKALEASKT 224 (401)
Q Consensus 199 ~~K~l~g~~g~G~l~~~~~~~~~~~~ 224 (401)
++-.. |+ +|++...+.+.+.+..
T Consensus 157 p~si~-GS--IGVi~~~~~~~~l~~k 179 (317)
T COG0616 157 PSSIT-GS--IGVISGAPNFEELLEK 179 (317)
T ss_pred CCcee-ee--ceeEEecCCHHHHHHh
Confidence 66654 34 4788777666544443
No 429
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=50.28 E-value=1.8e+02 Score=26.06 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=42.3
Q ss_pred CeEEEEcCCcchH-HHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHH
Q 015729 85 DRIISFLIGQFSL-LWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKV 159 (401)
Q Consensus 85 d~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i 159 (401)
|.|++++..+-.. .+...++..|+.++.+=.+ .+ ..+.++...+.. ...+++......||.... +.++
T Consensus 121 dgviipDLP~ee~~~~~~~~~~~gi~~I~lv~P-tT--~~eri~~i~~~a----~gFIY~vS~~GvTG~~~~~~~~~~~~ 193 (263)
T CHL00200 121 KGLIIPDLPYEESDYLISVCNLYNIELILLIAP-TS--SKSRIQKIARAA----PGCIYLVSTTGVTGLKTELDKKLKKL 193 (263)
T ss_pred eEEEecCCCHHHHHHHHHHHHHcCCCEEEEECC-CC--CHHHHHHHHHhC----CCcEEEEcCCCCCCCCccccHHHHHH
Confidence 5677766532211 1445667777766655322 22 355666555431 135555455666776432 3444
Q ss_pred HHHhhhcCCCcEEEEe
Q 015729 160 RKLLDEYRHPALFLVD 175 (401)
Q Consensus 160 ~~l~~~~~~~~~li~D 175 (401)
.+..+++ .+.++.+|
T Consensus 194 i~~ir~~-t~~Pi~vG 208 (263)
T CHL00200 194 IETIKKM-TNKPIILG 208 (263)
T ss_pred HHHHHHh-cCCCEEEE
Confidence 4444442 45566655
No 430
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=50.15 E-value=64 Score=29.43 Aligned_cols=87 Identities=16% Similarity=0.126 Sum_probs=53.1
Q ss_pred CCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHH---HHHhccC
Q 015729 58 TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLA---SKLAADT 134 (401)
Q Consensus 58 ~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le---~~~~~~~ 134 (401)
++...++=.++|+.++-+++.+-.. |=++++..|+..|..-..+.+.+|++++.++..+++ ....++ +...+.+
T Consensus 60 ~pG~tIVE~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~--~~~a~~~a~el~~~~p 136 (300)
T COG0031 60 KPGGTIVEATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGN--MKGAIERAKELAAEIP 136 (300)
T ss_pred CCCCEEEEcCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCc--hHHHHHHHHHHHHhCC
Confidence 3444477788888888887755443 434555556567766667889999999999874432 233333 3444332
Q ss_pred CCCceEEEEEecCCCc
Q 015729 135 AHTIKAICIVHNETAT 150 (401)
Q Consensus 135 ~~~~~~i~~~~~~n~t 150 (401)
+ ..+...+..||.
T Consensus 137 ~---~~~~~~Qf~Npa 149 (300)
T COG0031 137 G---YAVWLNQFENPA 149 (300)
T ss_pred C---ceEchhhcCCCc
Confidence 1 266665555553
No 431
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=50.12 E-value=2.5e+02 Score=27.21 Aligned_cols=130 Identities=11% Similarity=0.164 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHhcCC---------CCceEEecC----ChhHHHHHHHhccCCCCCeEEEEcCCcchHHH----HHHH
Q 015729 41 PALTKTLLEDIKKIFKTT---------SGTPFLIPT----TGTGAWESALTNTLSPGDRIISFLIGQFSLLW----IDQQ 103 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~---------~~~~i~~~~----g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~ 103 (401)
...+.-+.+.+-+++|.. ++..|++++ |-|...--+..-+-+.|.+|++.....|-... ..++
T Consensus 72 q~~iKiV~eELv~llG~~~~~~~l~~~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD~~RpAA~eQL~~La 151 (451)
T COG0541 72 QQFIKIVYEELVKLLGGENSELNLAKKPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAADTYRPAAIEQLKQLA 151 (451)
T ss_pred HHHHHHHHHHHHHHhCCCCcccccCCCCCeEEEEEeccCCChHhHHHHHHHHHHHcCCceEEEecccCChHHHHHHHHHH
Confidence 345666777777788741 234233321 22222111111223467778777665454432 2333
Q ss_pred HHcCCcEEEEeCCCCCCCChHHH-HHHHhccCCCCceEEEEEecCCCccccc-c---hHHHHHHhhh-cCCCcEEEEecc
Q 015729 104 QRLNFNVDVVESDWGEGAKLDVL-ASKLAADTAHTIKAICIVHNETATGVTN-N---LSKVRKLLDE-YRHPALFLVDGV 177 (401)
Q Consensus 104 ~~~g~~~~~v~~~~~~~~d~~~l-e~~~~~~~~~~~~~i~~~~~~n~tG~~~-~---l~~i~~l~~~-~~~~~~li~D~a 177 (401)
+..|+ .+.+. +..-||-++ ++.+..-......++++.. .|... + ++++.++.+. .|..+++++|+.
T Consensus 152 ~q~~v--~~f~~--~~~~~Pv~Iak~al~~ak~~~~DvvIvDT----AGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam 223 (451)
T COG0541 152 EQVGV--PFFGS--GTEKDPVEIAKAALEKAKEEGYDVVIVDT----AGRLHIDEELMDELKEIKEVINPDETLLVVDAM 223 (451)
T ss_pred HHcCC--ceecC--CCCCCHHHHHHHHHHHHHHcCCCEEEEeC----CCcccccHHHHHHHHHHHhhcCCCeEEEEEecc
Confidence 43343 33333 222355544 3334321112345666663 45553 2 5667777666 569999999986
Q ss_pred c
Q 015729 178 S 178 (401)
Q Consensus 178 ~ 178 (401)
.
T Consensus 224 ~ 224 (451)
T COG0541 224 I 224 (451)
T ss_pred c
Confidence 3
No 432
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=48.92 E-value=83 Score=26.72 Aligned_cols=92 Identities=10% Similarity=0.117 Sum_probs=46.6
Q ss_pred CCeEEEEcCCcchHH----HHHHHHHcCCcEEEEeCCCCCCCCh-HHHHHHHhccCCCCceEEEEEecCCCcccccchHH
Q 015729 84 GDRIISFLIGQFSLL----WIDQQQRLNFNVDVVESDWGEGAKL-DVLASKLAADTAHTIKAICIVHNETATGVTNNLSK 158 (401)
Q Consensus 84 gd~vl~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~-~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~ 158 (401)
+.+|.+.+...+-.. ...+++..|+.+....... |+ +.+.+.+++...++...|++..+....-....+++
T Consensus 29 ~~~v~lis~D~~R~ga~eQL~~~a~~l~vp~~~~~~~~----~~~~~~~~~l~~~~~~~~D~vlIDT~Gr~~~d~~~~~e 104 (196)
T PF00448_consen 29 GKKVALISADTYRIGAVEQLKTYAEILGVPFYVARTES----DPAEIAREALEKFRKKGYDLVLIDTAGRSPRDEELLEE 104 (196)
T ss_dssp T--EEEEEESTSSTHHHHHHHHHHHHHTEEEEESSTTS----CHHHHHHHHHHHHHHTTSSEEEEEE-SSSSTHHHHHHH
T ss_pred cccceeecCCCCCccHHHHHHHHHHHhccccchhhcch----hhHHHHHHHHHHHhhcCCCEEEEecCCcchhhHHHHHH
Confidence 667665554434322 3456777786655544332 33 33333343211123468888865432222223555
Q ss_pred HHHHhhh-cCCCcEEEEecccc
Q 015729 159 VRKLLDE-YRHPALFLVDGVSS 179 (401)
Q Consensus 159 i~~l~~~-~~~~~~li~D~a~~ 179 (401)
+.++.+. .+..++++.|+...
T Consensus 105 l~~~~~~~~~~~~~LVlsa~~~ 126 (196)
T PF00448_consen 105 LKKLLEALNPDEVHLVLSATMG 126 (196)
T ss_dssp HHHHHHHHSSSEEEEEEEGGGG
T ss_pred HHHHhhhcCCccceEEEecccC
Confidence 5555555 34788999998754
No 433
>TIGR00322 diphth2_R diphthamide biosynthesis protein 2-related domain. Because archaeal species are known to have the diphthamide modification to the conserved His of archaeal and eukaryotic EF-2, it may be that the lone homolog of YKL191W in M. jannaschii, A. fulgidus, and M. thermoautotrophicum is orthologous. However, each of these is considerably shorter than YKL191W and seems more closely related to the uncharacterized protein YIL103W than to YKL191W.
Probab=48.61 E-value=80 Score=29.42 Aligned_cols=80 Identities=11% Similarity=0.214 Sum_probs=56.5
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhh-cCCCcEEEEecccccCcce-eccCcccceEEE
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVSSICAID-FRMDEWGIDVAL 196 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~-~~~~~~li~D~a~~~~~~~-~~~~~~~~di~~ 196 (401)
..++.+...+.+++. ..+-|.+- .|-|....-.+|.+..++ .+..++|..|-+++..+.. ......++|.++
T Consensus 3 y~~e~~~~i~~I~~~---~~krV~LQ---fPdgLl~~a~~ia~~l~~~~~~~v~IlaD~~YGaCcvdd~~a~~~~aD~iV 76 (332)
T TIGR00322 3 YNLETEKVIGNIRKY---NAKRVGLQ---MPEGLKIRALEIAEIIEQFCGVETVISGDTSFGACDIDDFTARALDVDLIV 76 (332)
T ss_pred ccccHHHHHHHHHHc---CCCEEEEE---CCHHHHHHHHHHHHHHHhccCceEEEEcCCceecCCCCHHHHhhcCCCEEE
Confidence 346677777777653 23445554 577888888888888776 4578888888888877653 233445899999
Q ss_pred ecCCCccc
Q 015729 197 TGSQKALS 204 (401)
Q Consensus 197 ~s~~K~l~ 204 (401)
.=+|..+.
T Consensus 77 HyGHscl~ 84 (332)
T TIGR00322 77 HYAHTPLV 84 (332)
T ss_pred EcCCCCCC
Confidence 99999885
No 434
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=48.52 E-value=2.5e+02 Score=26.82 Aligned_cols=88 Identities=10% Similarity=0.127 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCcchHH----HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHH
Q 015729 83 PGDRIISFLIGQFSLL----WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK 158 (401)
Q Consensus 83 ~gd~vl~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~ 158 (401)
.|.+|.+.+...+-.. +..+++..|+.+..+. +++++.+.+.+.. +...|++..+.........+.+
T Consensus 205 ~g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~-------~~~~l~~~L~~~~--~~DlVLIDTaGr~~~~~~~l~e 275 (388)
T PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE-------SFKDLKEEITQSK--DFDLVLVDTIGKSPKDFMKLAE 275 (388)
T ss_pred CCCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC-------cHHHHHHHHHHhC--CCCEEEEcCCCCCccCHHHHHH
Confidence 4667766655444332 3344555566443322 4667777665432 4567788765433333344677
Q ss_pred HHHHhhhc--CCCcEEEEecccc
Q 015729 159 VRKLLDEY--RHPALFLVDGVSS 179 (401)
Q Consensus 159 i~~l~~~~--~~~~~li~D~a~~ 179 (401)
+.++.+.. +..+++++|++..
T Consensus 276 l~~~l~~~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 276 MKELLNACGRDAEFHLAVSSTTK 298 (388)
T ss_pred HHHHHHhcCCCCeEEEEEcCCCC
Confidence 77777752 2368899998754
No 435
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=47.31 E-value=1.5e+02 Score=26.66 Aligned_cols=98 Identities=12% Similarity=0.094 Sum_probs=53.5
Q ss_pred EecCChhHHHHHHHh-ccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCC--CCc
Q 015729 64 LIPTTGTGAWESALT-NTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA--HTI 138 (401)
Q Consensus 64 ~~~~g~t~a~~~~~~-~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~--~~~ 138 (401)
++..|+|.+|-..+. .+...|.+++++.-.---.. ..++-+..|+++..+++|.. +++++++..++... ..+
T Consensus 9 ~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs---~~~~~~~l~~~l~~~~~~I 85 (265)
T COG0300 9 ALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS---DPEALERLEDELKERGGPI 85 (265)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC---ChhHHHHHHHHHHhcCCcc
Confidence 444567777766553 46678888777755211111 23344445778888888765 45555554433110 245
Q ss_pred eEEEEEecCCCccccc--chHHHHHHhh
Q 015729 139 KAICIVHNETATGVTN--NLSKVRKLLD 164 (401)
Q Consensus 139 ~~i~~~~~~n~tG~~~--~l~~i~~l~~ 164 (401)
.+++=+......|... +++++.+..+
T Consensus 86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 86 DVLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred cEEEECCCcCCccchhhCChHHHHHHHH
Confidence 5555555555555333 5666666655
No 436
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.86 E-value=1.3e+02 Score=22.33 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=34.7
Q ss_pred CCCCHHHHHHHHHhhCCeEEc-----cCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 315 SHINSSEIVRRAWQRYNLSLG-----LGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 315 ~~~~~~~l~~~L~~~~~i~v~-----~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
+..++.++.+.|.++ +.... .|+-+.....+-|+ .++++++.++..|++.++.
T Consensus 9 qd~da~~l~~~L~d~-~fraTkLAsTGGFlkaGNTTfliG----ved~~vd~~~s~Ike~C~~ 66 (109)
T COG3870 9 QDQDANELEDALTDK-NFRATKLASTGGFLKAGNTTFLIG----VEDDRVDALRSLIKENCKS 66 (109)
T ss_pred ecccHHHHHHHHHhC-CceeEEeeccCceeecCCeEEEEe----cccchhHHHHHHHHHHhhh
Confidence 456889999999876 54432 22322112224443 5788999999999998853
No 437
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=44.58 E-value=68 Score=28.77 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=49.7
Q ss_pred ChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE-ecccccCcceeccCcccceEEEecCC
Q 015729 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV-DGVSSICAIDFRMDEWGIDVALTGSQ 200 (401)
Q Consensus 122 d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~-D~a~~~~~~~~~~~~~~~di~~~s~~ 200 (401)
|.+.+.+.+++-+ +...+.++ .++|.|.+....+|+++.++++..+.+++ +.|.+.|.+ -..++|-++.+.+
T Consensus 76 dse~v~raI~~~~-~~~~IdLi--i~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTl----IALaADeIvM~p~ 148 (285)
T PF01972_consen 76 DSEFVLRAIREAP-KDKPIDLI--IHTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTL----IALAADEIVMGPG 148 (285)
T ss_pred hHHHHHHHHHhcC-CCCceEEE--EECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHH----HHHhCCeEEECCC
Confidence 5566677776533 11223233 36899999999999999999766666666 556666643 1345777777777
Q ss_pred Cccc
Q 015729 201 KALS 204 (401)
Q Consensus 201 K~l~ 204 (401)
-.++
T Consensus 149 a~LG 152 (285)
T PF01972_consen 149 AVLG 152 (285)
T ss_pred CccC
Confidence 7663
No 438
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=43.23 E-value=1.3e+02 Score=22.00 Aligned_cols=63 Identities=11% Similarity=0.104 Sum_probs=40.3
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHH--HHHHHhccCCCCceEEEEEecCCCccccc--chHHHHHHhhhcCCCcEEEE
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDV--LASKLAADTAHTIKAICIVHNETATGVTN--NLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~--le~~~~~~~~~~~~~i~~~~~~n~tG~~~--~l~~i~~l~~~~~~~~~li~ 174 (401)
+...++..|.+.+.. ..++...... ++..+. +..+|++.. +.+. -...+.+.|++ +|++++.
T Consensus 15 ~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~-----~aD~VIv~t-----~~vsH~~~~~vk~~akk--~~ip~~~ 80 (97)
T PF10087_consen 15 YKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIK-----KADLVIVFT-----DYVSHNAMWKVKKAAKK--YGIPIIY 80 (97)
T ss_pred HHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcC-----CCCEEEEEe-----CCcChHHHHHHHHHHHH--cCCcEEE
Confidence 557788899998888 2222233333 777774 345565542 2232 36778999999 9998775
Q ss_pred e
Q 015729 175 D 175 (401)
Q Consensus 175 D 175 (401)
=
T Consensus 81 ~ 81 (97)
T PF10087_consen 81 S 81 (97)
T ss_pred E
Confidence 4
No 439
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=42.79 E-value=2.7e+02 Score=25.53 Aligned_cols=159 Identities=10% Similarity=0.020 Sum_probs=82.2
Q ss_pred CCCCCCCCcccccCCCcCChHHHHHHHcc-CcC-C--CCCcc-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 015729 2 DYMYAPGKNHLFVPGPVHIPDQVIRAMNR-NNE-D--YRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (401)
Q Consensus 2 ~~~~~~~~~~~~~~~p~~~~~~v~~a~~~-~~~-~--~~~~~-~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 76 (401)
-.-.+|+-.+.+.|.|-..-+..-+.+.. .+. + -.... -..-.++|+-.+.+.+-... +-++|-|+.+++..-
T Consensus 2 ~l~rf~R~~l~~~pTPiq~L~rls~~lg~eiYiKRDD~t~l~~gGNK~RKLefll~eal~~g~--dTlvT~GgiQSNh~r 79 (323)
T COG2515 2 NLSRFPRMELIFGPTPIQKLPRLSAHLGVEIYIKRDDLTGLAFGGNKIRKLEFLLGEALRKGA--DTLVTYGGIQSNHVR 79 (323)
T ss_pred CcccCCccccCCCCChhhhHHHHHHhcCeEEEEEcccccccccCccHHHHHHHHHhhhhhcCC--cEEEEecccchhHHH
Confidence 34456666666666665555544444421 000 0 00111 12345566666656553322 368888999888754
Q ss_pred Hhc----cCCCCCeEEEEcCCc---chHHHHHHHHHcCCcEEEEeCCCCC--CCChHHHHHHHhccCCCCceEEEEEecC
Q 015729 77 LTN----TLSPGDRIISFLIGQ---FSLLWIDQQQRLNFNVDVVESDWGE--GAKLDVLASKLAADTAHTIKAICIVHNE 147 (401)
Q Consensus 77 ~~~----~~~~gd~vl~~~~~~---~~~~~~~~~~~~g~~~~~v~~~~~~--~~d~~~le~~~~~~~~~~~~~i~~~~~~ 147 (401)
..+ .+.- +-|++....- .-+.-..+....|+.++.++...+. +...+.+.+-+++.. .++.+ +.....
T Consensus 80 ~tAavA~~lGl-~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~~~g-~kpyv-Ip~GG~ 156 (323)
T COG2515 80 QTAAVAAKLGL-KCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVRKQG-GKPYV-IPEGGS 156 (323)
T ss_pred HHHHHHHhcCC-cEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHHHhcC-CCCcE-eccCCc
Confidence 322 2222 3344443311 1111113567789999988876554 334566666565543 34433 333346
Q ss_pred CCcccc---cchHHHHHHhhh
Q 015729 148 TATGVT---NNLSKVRKLLDE 165 (401)
Q Consensus 148 n~tG~~---~~l~~i~~l~~~ 165 (401)
||.|.. --..||++.+++
T Consensus 157 ~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 157 SPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred CccccccHHHHHHHHHHHHhh
Confidence 774444 456677777776
No 440
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=42.79 E-value=58 Score=28.86 Aligned_cols=70 Identities=11% Similarity=0.006 Sum_probs=41.9
Q ss_pred cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEe-cC----CCcccccchHHHHHHhhhcCCCcEEEEecccccCc
Q 015729 109 NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH-NE----TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA 182 (401)
Q Consensus 109 ~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~-~~----n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~ 182 (401)
+++.+... ...++++++.+++......-.-+++++ .. +++-...++..|..+-++ .+++|++|.+|+.|.
T Consensus 123 kPVilk~G--~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~--~~lPVivd~SHs~G~ 197 (250)
T PRK13397 123 KPILFKRG--LMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQK--TDLPIIVDVSHSTGR 197 (250)
T ss_pred CeEEEeCC--CCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHH--hCCCeEECCCCCCcc
Confidence 56666533 234777777665531101112344444 21 222235678888888887 899999999999874
No 441
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=42.70 E-value=1.9e+02 Score=26.40 Aligned_cols=148 Identities=15% Similarity=0.173 Sum_probs=65.9
Q ss_pred ceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCce
Q 015729 61 TPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIK 139 (401)
Q Consensus 61 ~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~ 139 (401)
+.+++|+||+.---.+..-+.+.|.++++.+-.-.+.. ..+..+..| ++....+|-...-+...+.+.++++-+ .+
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G-~V- 115 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVG-DV- 115 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcC-Cc-
Confidence 44677777766555555567788887766654333332 223333334 555555554322233444445554331 22
Q ss_pred EEEEEecCCCcccc---cchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecH
Q 015729 140 AICIVHNETATGVT---NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASP 216 (401)
Q Consensus 140 ~i~~~~~~n~tG~~---~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~ 216 (401)
-|++++..=.++.- ++-++|.+.-+ -|+.=+..-+.++. |.=.+..+-+|+..++.-.+.|++|++--+.++
T Consensus 116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~---vN~~~~f~t~kaFL--P~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK 190 (300)
T KOG1201|consen 116 DILVNNAGIVTGKKLLDCSDEEIQKTFD---VNTIAHFWTTKAFL--PKMLENNNGHIVTIASVAGLFGPAGLADYCASK 190 (300)
T ss_pred eEEEeccccccCCCccCCCHHHHHHHHH---HhhHHHHHHHHHHh--HHHHhcCCceEEEehhhhcccCCccchhhhhhH
Confidence 33333322112211 23455555544 23322222233322 111222344555555444455666644333433
No 442
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=42.07 E-value=1.7e+02 Score=23.11 Aligned_cols=70 Identities=16% Similarity=0.047 Sum_probs=44.3
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC-CCcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR-HPALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~-~~~~li~D~a 177 (401)
.....+..|.+++..-.+ ..++++-+++.+ +++.++.++.-. +.....++++.+.+++.. .+..+++=.+
T Consensus 21 v~~~l~~~GfeVi~LG~~----v~~e~~v~aa~~---~~adiVglS~l~--~~~~~~~~~~~~~l~~~gl~~~~vivGG~ 91 (134)
T TIGR01501 21 LDHAFTNAGFNVVNLGVL----SPQEEFIKAAIE---TKADAILVSSLY--GHGEIDCKGLRQKCDEAGLEGILLYVGGN 91 (134)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEeccc--ccCHHHHHHHHHHHHHCCCCCCEEEecCC
Confidence 456678888888766544 357777776655 456888887543 223345788888888721 2455555443
No 443
>PF01152 Bac_globin: Bacterial-like globin; InterPro: IPR001486 Globins are haem-containing proteins involved in binding and/or transporting oxygen. They belong to a very large and well studied family that is widely distributed in many organisms []. Globins have evolved from a common ancestor and can be divided into three groups: single-domain globins, and two types of chimeric globins, flavohaemoglobins and globin-coupled sensors. Bacteria have all three types of globins, while archaea lack flavohaemoglobins, and eukaryotes lack globin-coupled sensors []. Several functionally different haemoglobins can coexist in the same species. The major types of globins include: Haemoglobin (Hb): trimer of two alpha and two beta chains, although embryonic and foetal forms can substitute the alpha or beta chain for ones with higher oxygen affinity, such as gamma, delta, epsilon or zeta chains. Hb transports oxygen from lungs to other tissues in vertebrates []. Hb proteins are also present in unicellular organisms where they act as enzymes or sensors []. Myoglobin (Mb): monomeric protein responsible for oxygen storage in vertebrate muscle []. Neuroglobin: a myoglobin-like haemprotein expressed in vertebrate brain and retina, where it is involved in neuroprotection from damage due to hypoxia or ischemia []. Neuroglobin belongs to a branch of the globin family that diverged early in evolution. Cytoglobin: an oxygen sensor expressed in multiple tissues. Related to neuroglobin []. Erythrocruorin: highly cooperative extracellular respiratory proteins found in annelids and arthropods that are assembled from as many as 180 subunit into hexagonal bilayers []. Leghaemoglobin (legHb or symbiotic Hb): occurs in the root nodules of leguminous plants, where it facilitates the diffusion of oxygen to symbiotic bacteriods in order to promote nitrogen fixation. Non-symbiotic haemoglobin (NsHb): occurs in non-leguminous plants, and can be over-expressed in stressed plants []. Flavohaemoglobins (FHb): chimeric, with an N-terminal globin domain and a C-terminal ferredoxin reductase-like NAD/FAD-binding domain. FHb provides protection against nitric oxide via its C-terminal domain, which transfers electrons to haem in the globin []. Globin-coupled sensors: chimeric, with an N-terminal myoglobin-like domain and a C-terminal domain that resembles the cytoplasmic signalling domain of bacterial chemoreceptors. They bind oxygen, and act to initiate an aerotactic response or regulate gene expression [, ]. Protoglobin: a single domain globin found in archaea that is related to the N-terminal domain of globin-coupled sensors []. Truncated 2/2 globin: lack the first helix, giving them a 2-over-2 instead of the canonical 3-over-3 alpha-helical sandwich fold. Can be divided into three main groups (I, II and II) based on structural features []. This entry represents a group of haemoglobin-like proteins found in eubacteria, cyanobacteria, protozoa, algae and plants, but not in animals or yeast. These proteins have a truncated 2-over-2 rather than the canonical 3-over-3 alpha-helical sandwich fold []. This entry includes: HbN (or GlbN): a truncated haemoglobin-like protein that binds oxygen cooperatively with a very high affinity and a slow dissociation rate, which may exclude it from oxygen transport. It appears to be involved in bacterial nitric oxide detoxification and in nitrosative stress []. Cyanoglobin (or GlbN): a truncated haemoprotein found in cyanobacteria that has high oxygen affinity, and which appears to serve as part of a terminal oxidase, rather than as a respiratory pigment []. HbO (or GlbO): a truncated haemoglobin-like protein with a lower oxygen affinity than HbN. HbO associates with the bacterial cell membrane, where it significantly increases oxygen uptake over membranes lacking this protein. HbO appears to interact with a terminal oxidase, and could participate in an oxygen/electron-transfer process that facilitates oxygen transfer during aerobic metabolism []. Glb3: a nuclear-encoded truncated haemoglobin from plants that appears more closely related to HbO than HbN. Glb3 from Arabidopsis thaliana (Mouse-ear cress) exhibits an unusual concentration-independent binding of oxygen and carbon dioxide []. ; GO: 0019825 oxygen binding, 0015671 oxygen transport; PDB: 2BKM_B 1UVY_A 1DLW_A 2XYK_B 2IG3_A 2GKM_B 1S61_A 1S56_B 1RTE_B 2GLN_A ....
Probab=41.92 E-value=24 Score=27.04 Aligned_cols=41 Identities=20% Similarity=0.242 Sum_probs=33.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHcc
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNN 393 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 393 (401)
.+++++.+..++.+++++++++++......+...++.+..+
T Consensus 76 ~it~~~f~~~~~~~~~al~~~~v~~~~~~~~~~~~~~~~~~ 116 (120)
T PF01152_consen 76 GITEEHFDRWLELLKQALDELGVPEELIDELLARLESLRDD 116 (120)
T ss_dssp -BBHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999888777777777666543
No 444
>PF03147 FDX-ACB: Ferredoxin-fold anticodon binding domain; InterPro: IPR005121 Aminoacyl-tRNA synthetases (aaRSs) play a crucial role in the translation of the genetic code by means of covalent attachment of amino acids to their cognate tRNAs. Phenylalanine-tRNA synthetase (PheRS) is known to be among the most complex enzymes of the aaRS family. Bacterial and mitochondrial PheRSs share a ferredoxin-fold anticodon binding (FDX-ACB) domain, which represents a canonical double split alpha+beta motif having no insertions. The FDX-ACB domain displays a typical RNA recognition fold (RRM) (see PDOC00030 from PROSITEDOC) formed by the four-stranded antiparallel beta sheet, with two helices packed against it [, , , , ].; GO: 0000049 tRNA binding, 0000287 magnesium ion binding, 0004826 phenylalanine-tRNA ligase activity, 0005524 ATP binding, 0006432 phenylalanyl-tRNA aminoacylation, 0008033 tRNA processing; PDB: 1JJC_B 1EIY_B 1PYS_B 3HFZ_B 3TEH_B 3PCO_D 2RHS_D 2RHQ_B 2AKW_B 1B70_B ....
Probab=41.03 E-value=1.4e+02 Score=21.72 Aligned_cols=68 Identities=15% Similarity=0.169 Sum_probs=37.4
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCC-----eEEccCCCC--C-CCc---EEEEeecc---cCCHHHHHHHHHHHHHHHH-hc
Q 015729 309 TAVIVPSHINSSEIVRRAWQRYN-----LSLGLGLNK--V-AGK---VFRIGHLG---HLNELQLLGCLAGVEMILK-DV 373 (401)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~~-----i~v~~g~~~--~-~~~---~~Ri~~~~---~~~~~di~~~~~~i~~~l~-~~ 373 (401)
++|.+|+.+...++.+.+.+..+ |.+.--|.. . .+. .+|+.+.. +++.++++.+.+.|.+.+. ++
T Consensus 10 iS~~v~~~~~~~~i~~~i~~~~~~~l~~v~l~D~y~~~~l~~g~kS~~~rl~~~~~~~TLt~~ev~~~~~~i~~~l~~~~ 89 (94)
T PF03147_consen 10 ISFVVPEDVPFADIEEVIRSAGGPLLESVELFDVYRGEKLPEGKKSLTYRLTYQSPDRTLTDEEVNEIHDKIIKALEKKL 89 (94)
T ss_dssp EEEEEETTS-HHHHHHHHHHHHTTTEEEEEEEEEEESTTSGTTEEEEEEEEEE--SSS---HHHHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCCCHHHHHHHHHHhCccceeEEEEEEEEcCCCCCCCcEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 45666777788888887775422 111111111 1 122 27776543 6789999999999998884 56
Q ss_pred CCC
Q 015729 374 GYP 376 (401)
Q Consensus 374 ~~~ 376 (401)
|..
T Consensus 90 ~~~ 92 (94)
T PF03147_consen 90 GAE 92 (94)
T ss_dssp T-B
T ss_pred CcE
Confidence 653
No 445
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=40.33 E-value=78 Score=29.67 Aligned_cols=121 Identities=10% Similarity=0.005 Sum_probs=60.4
Q ss_pred HHHHHHhcCCCCceEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHH
Q 015729 49 EDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLAS 128 (401)
Q Consensus 49 ~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~ 128 (401)
++.++-+|.+ ++-..-....++.+.. + -|-+-+.............+...| +++.+.-.- ..+++++..
T Consensus 158 ~~~~~e~Gl~----~~tev~d~~~v~~~~~-~---~d~lqIga~~~~n~~LL~~va~t~-kPVllk~G~--~~t~ee~~~ 226 (352)
T PRK13396 158 AAAREATGLG----IITEVMDAADLEKIAE-V---ADVIQVGARNMQNFSLLKKVGAQD-KPVLLKRGM--AATIDEWLM 226 (352)
T ss_pred HHHHHHcCCc----EEEeeCCHHHHHHHHh-h---CCeEEECcccccCHHHHHHHHccC-CeEEEeCCC--CCCHHHHHH
Confidence 3445555554 2333333444554432 2 244444333222222223333334 566565332 236777666
Q ss_pred HHhccCCCCceEEEEEec-----C-CCcccccchHHHHHHhhhcCCCcEEEEecccccCc
Q 015729 129 KLAADTAHTIKAICIVHN-----E-TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA 182 (401)
Q Consensus 129 ~~~~~~~~~~~~i~~~~~-----~-n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~ 182 (401)
+++......-.-+++++- . +.+-...++..|..+-+. .+++||+|.+|+.|.
T Consensus 227 A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~--~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 227 AAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSL--THLPIMIDPSHGTGK 284 (352)
T ss_pred HHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHh--hCCCEEECCcccCCc
Confidence 554311011123444433 1 122345678888888666 789999999999874
No 446
>cd00652 TBP_TLF TATA box binding protein (TBP): Present in archaea and eukaryotes, TBPs are transcription factors that recognize promoters and initiate transcription. TBP has been shown to be an essential component of three different transcription initiation complexes: SL1, TFIID and TFIIIB, directing transcription by RNA polymerases I, II and III, respectively. TBP binds directly to the TATA box promoter element, where it nucleates polymerase assembly, thus defining the transcription start site. TBP's binding in the minor groove induces a dramatic DNA bending while its own structure barely changes. The conserved core domain of TBP, which binds to the TATA box, has a bipartite structure, with intramolecular symmetry generating a saddle-shaped structure that sits astride the DNA. New members of the TBP family, called TBP-like proteins (TBLP, TLF, TLP) or TBP-related factors (TRF1, TRF2,TRP), are similar to the core domain of TBPs, with identical or chemically similar amino acids at many
Probab=40.01 E-value=2.2e+02 Score=23.68 Aligned_cols=86 Identities=17% Similarity=0.069 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC-----C-Cc-EE------EEee
Q 015729 284 ATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV-----A-GK-VF------RIGH 350 (401)
Q Consensus 284 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~~~-----~-~~-~~------Ri~~ 350 (401)
.+.+.|+++|++......-.-.+.+..+.+|-.++-++++..+.+ .+...|..++. . ++ .+ ++.+
T Consensus 75 ~~~~~L~~~g~~~~~~~~~~v~NIvas~~l~~~i~L~~la~~~~~--~~~YePe~fpgli~r~~~pk~t~lIF~sGkvvi 152 (174)
T cd00652 75 KYARILQKLGFPVEKFPEFKVQNIVASCDLGFPIRLEELALKHPE--NASYEPELFPGLIYRMDEPKVVLLIFVSGKIVI 152 (174)
T ss_pred HHHHHHHHcCCCccccCceEEEEEEEEEECCCcccHHHHHhhhhc--ccEECCccCceEEEEecCCcEEEEEEcCCEEEE
Confidence 345555566666532211112344566677777787777766641 34443332210 0 00 01 2334
Q ss_pred cccCCHHHHHHHHHHHHHHHH
Q 015729 351 LGHLNELQLLGCLAGVEMILK 371 (401)
Q Consensus 351 ~~~~~~~di~~~~~~i~~~l~ 371 (401)
.+.-+++|+..+++.|-..|.
T Consensus 153 tGaks~~~~~~a~~~i~~~L~ 173 (174)
T cd00652 153 TGAKSREDIYEAVEKIYPILK 173 (174)
T ss_pred EecCCHHHHHHHHHHHHHHHh
Confidence 455678999999988877664
No 447
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=39.78 E-value=1.6e+02 Score=23.60 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=45.7
Q ss_pred CCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC------CCChHHHHHHHhccCCCCceEEEEEecCCCcccc-
Q 015729 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE------GAKLDVLASKLAADTAHTIKAICIVHNETATGVT- 153 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~------~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~- 153 (401)
..++++|.++ ||+.... ...+..+.++..++.+++. .+..++.++.+.. -.+++++... .+
T Consensus 8 ~~~~~~V~~V--G~f~P~~-~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~~-----aD~viiTGsT----lvN 75 (147)
T PF04016_consen 8 IGPGDKVGMV--GYFQPLV-EKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILPW-----ADVVIITGST----LVN 75 (147)
T ss_dssp TTTTSEEEEE--S--HCCH-HHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGGG------SEEEEECHH----CCT
T ss_pred hcCCCEEEEE--cCcHHHH-HHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHcc-----CCEEEEEeee----eec
Confidence 5678898887 5553332 3333467789999887631 1244566666653 3566666321 11
Q ss_pred cchHHHHHHhhhcCCCcEEEE
Q 015729 154 NNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~ 174 (401)
-.+++|.+.|++ ....+++
T Consensus 76 ~Ti~~iL~~~~~--~~~vil~ 94 (147)
T PF04016_consen 76 GTIDDILELARN--AREVILY 94 (147)
T ss_dssp TTHHHHHHHTTT--SSEEEEE
T ss_pred CCHHHHHHhCcc--CCeEEEE
Confidence 258899999995 4444443
No 448
>TIGR00272 DPH2 diphthamide biosynthesis protein 2. This protein has been shown in Saccharomyces cerevisiae to be one of several required for the modification of a particular histidine residue of translation elongation factor 2 to diphthamide. This modified site can then become the target for ADP-ribosylation by diphtheria toxin.
Probab=39.20 E-value=1.1e+02 Score=30.20 Aligned_cols=78 Identities=15% Similarity=0.210 Sum_probs=54.7
Q ss_pred CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc----CCCcEEEEecccccCcce-eccCcccceEE
Q 015729 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY----RHPALFLVDGVSSICAID-FRMDEWGIDVA 195 (401)
Q Consensus 121 ~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~----~~~~~li~D~a~~~~~~~-~~~~~~~~di~ 195 (401)
++.+.+.+.|++.. .+-|.+ +.|-|.+.+-.+|.+..++. ...++|+.|-+++..+.. ......++|++
T Consensus 37 yei~~~~~~I~~~~---~krVaL---QFPDgLL~~a~~va~~L~~~~~~~~~~v~IlaDtsYGaCCVDevaA~hv~aD~i 110 (496)
T TIGR00272 37 YEIEPTVGYIKQGN---EYQVAL---QFPDDLLKDSSKVVRLLQSKFPHGKIKFWVLADTAYSSCCVDEVAAEHVHAEAV 110 (496)
T ss_pred hhHHHHHHHHHHCC---CCEEEE---ECChHHHHHHHHHHHHHHhhcccCCceEEEEeCCcccccccCHHHHhhcCCCEE
Confidence 45666666666533 233444 46788888888887777661 378899999998887763 33444589999
Q ss_pred EecCCCccc
Q 015729 196 LTGSQKALS 204 (401)
Q Consensus 196 ~~s~~K~l~ 204 (401)
+.=+|-.+.
T Consensus 111 VHyGhsCLs 119 (496)
T TIGR00272 111 VHFGDACLS 119 (496)
T ss_pred EEeCCCCCC
Confidence 999998885
No 449
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=38.31 E-value=1.9e+02 Score=22.99 Aligned_cols=100 Identities=10% Similarity=0.110 Sum_probs=51.4
Q ss_pred EEecCChhHHHHHHHhccCCCCCeE-EEEcCC--cchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhcc--CCC
Q 015729 63 FLIPTTGTGAWESALTNTLSPGDRI-ISFLIG--QFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD--TAH 136 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~gd~v-l~~~~~--~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~--~~~ 136 (401)
++++++++.--..+...++..|..+ ++.... ..... ........+.++..+++|-. +.+.+++.+++- ...
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS---DPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT---SHHHHHHHHHHHHHHHS
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence 4455544333333345566676644 444432 11111 22223456788888887744 566666655431 112
Q ss_pred CceEEEEEecCCCcccccc--hHHHHHHhhh
Q 015729 137 TIKAICIVHNETATGVTNN--LSKVRKLLDE 165 (401)
Q Consensus 137 ~~~~i~~~~~~n~tG~~~~--l~~i~~l~~~ 165 (401)
.+..++.+......+...+ .+++.+..+-
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhhhcccc
Confidence 4667777766555555554 3555555554
No 450
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=37.63 E-value=2.1e+02 Score=28.06 Aligned_cols=87 Identities=8% Similarity=-0.005 Sum_probs=47.1
Q ss_pred cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc--------c
Q 015729 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--------G 151 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t--------G 151 (401)
..+.|.+|+..+.+.........+++.|.....+.+-.. .+++.+.+.+++ .+++.+++.+.++.. |
T Consensus 118 ~a~~g~kvlYvs~EEs~~qi~~ra~rlg~~~~~l~~~~e--~~~~~I~~~i~~---~~~~~vVIDSIq~l~~~~~~~~~g 192 (454)
T TIGR00416 118 LAKNQMKVLYVSGEESLQQIKMRAIRLGLPEPNLYVLSE--TNWEQICANIEE---ENPQACVIDSIQTLYSPDISSAPG 192 (454)
T ss_pred HHhcCCcEEEEECcCCHHHHHHHHHHcCCChHHeEEcCC--CCHHHHHHHHHh---cCCcEEEEecchhhcccccccCCC
Confidence 445555666655543333333334556653222222222 367888888765 467889999776532 2
Q ss_pred cccc----hHHHHHHhhhcCCCcEEE
Q 015729 152 VTNN----LSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 152 ~~~~----l~~i~~l~~~~~~~~~li 173 (401)
.... +..+.+++++ +|+.++
T Consensus 193 ~~~q~r~~~~~L~~~ak~--~giTvl 216 (454)
T TIGR00416 193 SVSQVRECTAELMRLAKT--RGIAIF 216 (454)
T ss_pred CHHHHHHHHHHHHHHHHH--hCCEEE
Confidence 2221 2347778888 666333
No 451
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=37.51 E-value=2.3e+02 Score=26.54 Aligned_cols=70 Identities=14% Similarity=0.222 Sum_probs=41.8
Q ss_pred CCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecC-CCcccccchHHHHHH
Q 015729 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNE-TATGVTNNLSKVRKL 162 (401)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~-n~tG~~~~l~~i~~l 162 (401)
+.+|++.+.|--...... ....|+++..||.+. +.+++. +. .++.|++++.. .|.-...-++.|.++
T Consensus 179 ~~~Vv~iD~GvK~nIlr~-L~~rg~~vtVVP~~t----~~eeIl---~~----~pDGiflSNGPGDP~~~~~~i~~ik~l 246 (368)
T COG0505 179 GKHVVVIDFGVKRNILRE-LVKRGCRVTVVPADT----SAEEIL---AL----NPDGIFLSNGPGDPAPLDYAIETIKEL 246 (368)
T ss_pred CcEEEEEEcCccHHHHHH-HHHCCCeEEEEcCCC----CHHHHH---hh----CCCEEEEeCCCCChhHHHHHHHHHHHH
Confidence 557888888755444433 444699999999763 455443 32 45789888654 442222234555555
Q ss_pred hhh
Q 015729 163 LDE 165 (401)
Q Consensus 163 ~~~ 165 (401)
...
T Consensus 247 ~~~ 249 (368)
T COG0505 247 LGT 249 (368)
T ss_pred hcc
Confidence 554
No 452
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=37.38 E-value=2.8e+02 Score=24.22 Aligned_cols=92 Identities=13% Similarity=0.078 Sum_probs=48.8
Q ss_pred HHHHHHHcCC--cEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc------hHHHHHHhhhcCCCc
Q 015729 99 WIDQQQRLNF--NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN------LSKVRKLLDEYRHPA 170 (401)
Q Consensus 99 ~~~~~~~~g~--~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~------l~~i~~l~~~~~~~~ 170 (401)
.....+..|+ +. .+-+++++ .++.++..+..-. .+++++....-.|...- ++++.++.+++++++
T Consensus 108 ~l~~Ik~~g~~~ka-GlalnP~T--p~~~i~~~l~~vD----~VLiMtV~PGfgGQ~f~~~~l~KI~~lr~~~~~~~~~~ 180 (228)
T PRK08091 108 TIEWLAKQKTTVLI-GLCLCPET--PISLLEPYLDQID----LIQILTLDPRTGTKAPSDLILDRVIQVENRLGNRRVEK 180 (228)
T ss_pred HHHHHHHCCCCceE-EEEECCCC--CHHHHHHHHhhcC----EEEEEEECCCCCCccccHHHHHHHHHHHHHHHhcCCCc
Confidence 3345566665 43 44456654 5677777775311 34455544444455541 344455555544568
Q ss_pred EEEEecccccCcceeccCcccceEEEec
Q 015729 171 LFLVDGVSSICAIDFRMDEWGIDVALTG 198 (401)
Q Consensus 171 ~li~D~a~~~~~~~~~~~~~~~di~~~s 198 (401)
.|-+|+--..... ....+.|+|+++.+
T Consensus 181 ~IeVDGGI~~~ti-~~l~~aGaD~~V~G 207 (228)
T PRK08091 181 LISIDGSMTLELA-SYLKQHQIDWVVSG 207 (228)
T ss_pred eEEEECCCCHHHH-HHHHHCCCCEEEEC
Confidence 8999963211111 12345688987765
No 453
>PLN02788 phenylalanine-tRNA synthetase
Probab=37.35 E-value=2.9e+02 Score=26.53 Aligned_cols=81 Identities=16% Similarity=0.192 Sum_probs=49.6
Q ss_pred CccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCC-e----EEccCC-CCCCCc---EEEEeecc---cCCHHHHHH
Q 015729 294 LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYN-L----SLGLGL-NKVAGK---VFRIGHLG---HLNELQLLG 361 (401)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-i----~v~~g~-~~~~~~---~~Ri~~~~---~~~~~di~~ 361 (401)
++.++..+..... ++|.+|+.++..++.+.+++..| + .+.--+ .+..|. .+||.+.. ++|++|++.
T Consensus 307 fkp~SkfP~v~RD--iSf~v~~~v~~~~i~~~Ir~~~g~lle~V~lfD~Y~g~k~GkkSl~~Rl~yrs~erTLTdeEIn~ 384 (402)
T PLN02788 307 FKPYSKYPPCYKD--ISFWISDEFTENNLCEVVRGIAGDLVEEVKLIDNFTNPKKGKTSHCYRIVYRSMERSLTDEEINA 384 (402)
T ss_pred cCcCCCCCCccee--EEEEECCCCCHHHHHHHHHHhCcCeEEEEEEEEEecCCCCCcEEEEEEEEEECCCCCCCHHHHHH
Confidence 3444444443443 56677888888999888876323 1 111111 111222 37886544 778999999
Q ss_pred HHHHHHHHH-HhcCCC
Q 015729 362 CLAGVEMIL-KDVGYP 376 (401)
Q Consensus 362 ~~~~i~~~l-~~~~~~ 376 (401)
+.+.|.+.+ +++|++
T Consensus 385 i~~kI~~~L~~klgv~ 400 (402)
T PLN02788 385 LQDKVREEVQKKLGVE 400 (402)
T ss_pred HHHHHHHHHHHHhCcE
Confidence 999998877 455654
No 454
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=37.14 E-value=9.4 Score=31.70 Aligned_cols=72 Identities=19% Similarity=0.321 Sum_probs=43.3
Q ss_pred CceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecH
Q 015729 137 TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASP 216 (401)
Q Consensus 137 ~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~ 216 (401)
+...+++- +|.+..++++.+.+++++.-++|++|-..+++.- +.+++++. + ...+ -|++..+.
T Consensus 19 ~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D-----~~~i~~L~----~-~~~~--dGIISTk~ 81 (175)
T PF04309_consen 19 DVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRD-----EAGIEYLK----E-YGKP--DGIISTKS 81 (175)
T ss_dssp SSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SS-----HHHHHHHH----H-TT----SEEEESSH
T ss_pred CCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCC-----HHHHHHHH----H-cCCC--cEEEeCCH
Confidence 34566665 4778999999999999777788888987766532 22222211 1 1112 26777777
Q ss_pred HHHHHhccC
Q 015729 217 KALEASKTA 225 (401)
Q Consensus 217 ~~~~~~~~~ 225 (401)
..+......
T Consensus 82 ~~i~~Ak~~ 90 (175)
T PF04309_consen 82 NLIKRAKKL 90 (175)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 776655543
No 455
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=36.74 E-value=3.1e+02 Score=24.51 Aligned_cols=74 Identities=11% Similarity=0.049 Sum_probs=37.2
Q ss_pred CeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccc----hHHH
Q 015729 85 DRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKV 159 (401)
Q Consensus 85 d~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~----l~~i 159 (401)
|-+++++..+--.. +...++..|+.++..=.+ . ...+.+++..+.. ...+++......||...+ +++.
T Consensus 117 dGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p-~--t~~~Ri~~i~~~a----~gFiY~vs~~GvTG~~~~~~~~l~~~ 189 (259)
T PF00290_consen 117 DGLIIPDLPPEESEELREAAKKHGLDLIPLVAP-T--TPEERIKKIAKQA----SGFIYLVSRMGVTGSRTELPDELKEF 189 (259)
T ss_dssp EEEEETTSBGGGHHHHHHHHHHTT-EEEEEEET-T--S-HHHHHHHHHH-----SSEEEEESSSSSSSTTSSCHHHHHHH
T ss_pred CEEEEcCCChHHHHHHHHHHHHcCCeEEEEECC-C--CCHHHHHHHHHhC----CcEEEeeccCCCCCCcccchHHHHHH
Confidence 56777765322221 445666677765554322 1 1455556555432 245666666667777643 3444
Q ss_pred HHHhhh
Q 015729 160 RKLLDE 165 (401)
Q Consensus 160 ~~l~~~ 165 (401)
.+.+++
T Consensus 190 i~~ik~ 195 (259)
T PF00290_consen 190 IKRIKK 195 (259)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444444
No 456
>PRK11823 DNA repair protein RadA; Provisional
Probab=36.74 E-value=2.3e+02 Score=27.64 Aligned_cols=86 Identities=10% Similarity=0.118 Sum_probs=47.0
Q ss_pred CCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCc--------ccc
Q 015729 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--------GVT 153 (401)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~t--------G~~ 153 (401)
..|.+|+..+.+.........+++.|.....+..... .+++.+.+.+++ .+++++++...++.. |..
T Consensus 106 ~~g~~vlYvs~Ees~~qi~~ra~rlg~~~~~l~~~~e--~~l~~i~~~i~~---~~~~lVVIDSIq~l~~~~~~~~~g~~ 180 (446)
T PRK11823 106 AAGGKVLYVSGEESASQIKLRAERLGLPSDNLYLLAE--TNLEAILATIEE---EKPDLVVIDSIQTMYSPELESAPGSV 180 (446)
T ss_pred hcCCeEEEEEccccHHHHHHHHHHcCCChhcEEEeCC--CCHHHHHHHHHh---hCCCEEEEechhhhccccccCCCCCH
Confidence 4455666555433333333445666653322222222 257777777765 467889999876432 111
Q ss_pred cc----hHHHHHHhhhcCCCcEEEE
Q 015729 154 NN----LSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 154 ~~----l~~i~~l~~~~~~~~~li~ 174 (401)
.. +..+.+++++ +|+.++.
T Consensus 181 ~qvr~~~~~L~~~ak~--~~itvil 203 (446)
T PRK11823 181 SQVRECAAELMRLAKQ--RGIAVFL 203 (446)
T ss_pred HHHHHHHHHHHHHHHH--cCCEEEE
Confidence 11 2357888888 7775444
No 457
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=36.65 E-value=1.8e+02 Score=25.26 Aligned_cols=65 Identities=8% Similarity=0.204 Sum_probs=39.9
Q ss_pred HHHHHHHcCCcEEEE-eCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 99 WIDQQQRLNFNVDVV-ESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v-~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
+...++..|.++..+ +...+..--.+.+++.+. .++++|++..... .....+.+-|++ .|++|+.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~----~~~d~Iiv~~~~~-----~~~~~~l~~~~~--~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAIS----QGVDGIIVSPVDP-----DSLAPFLEKAKA--AGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHH----TTESEEEEESSST-----TTTHHHHHHHHH--TTSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHH----hcCCEEEecCCCH-----HHHHHHHHHHhh--cCceEEE
Confidence 356778889988886 443322112345555665 4678888775432 223455566777 8897776
No 458
>PLN02683 pyruvate dehydrogenase E1 component subunit beta
Probab=36.32 E-value=1.5e+02 Score=27.96 Aligned_cols=24 Identities=8% Similarity=0.020 Sum_probs=13.4
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
.|.+.|.+.+++ ++.++++++...
T Consensus 268 lD~~~l~~~~~~--t~~vvtvEE~~~ 291 (356)
T PLN02683 268 LDRDTINASVRK--TNRLVTVEEGWP 291 (356)
T ss_pred cCHHHHHHHHhh--cCeEEEEeCCCc
Confidence 455556666666 555555555443
No 459
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=35.75 E-value=2.2e+02 Score=22.51 Aligned_cols=70 Identities=13% Similarity=-0.015 Sum_probs=44.3
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhc-CCCcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY-RHPALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~-~~~~~li~D~a 177 (401)
...+.+..|.+++..-.+ ..++++.+.+.+ .++.++.++...+ .....+.++.+.+++. ..++.+++=++
T Consensus 23 v~~~lr~~G~eVi~LG~~----vp~e~i~~~a~~---~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~~~~~~~i~vGG~ 93 (137)
T PRK02261 23 LDRALTEAGFEVINLGVM----TSQEEFIDAAIE---TDADAILVSSLYG--HGEIDCRGLREKCIEAGLGDILLYVGGN 93 (137)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEcCccc--cCHHHHHHHHHHHHhcCCCCCeEEEECC
Confidence 445678888888766544 457888777765 4578888875433 2333566777777763 33666665443
No 460
>PRK13689 hypothetical protein; Provisional
Probab=35.68 E-value=1.3e+02 Score=20.93 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCCCcch-HHHHHHHHH-HccCC
Q 015729 354 LNELQLLGCLAGVEMILKDVGYPVKLGS-GVAAASAYL-QNNIP 395 (401)
Q Consensus 354 ~~~~di~~~~~~i~~~l~~~~~~~~~~~-~~~~~~~~~-~~~~~ 395 (401)
.+.+++|.++..+-.+|++...+.++.- .+++.--.+ ..++|
T Consensus 7 Ysd~qvE~il~el~~VLeKH~Ap~DLSLMvLGN~vTnlln~~V~ 50 (75)
T PRK13689 7 YSDEQVEQLLAELLAVLEKHKAPTDLSLMVLGNMVTNLLNTSVA 50 (75)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCC
Confidence 4689999999999999999999999988 466665555 44443
No 461
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=35.61 E-value=74 Score=28.21 Aligned_cols=66 Identities=9% Similarity=0.038 Sum_probs=36.8
Q ss_pred cEEEEeCCCCCCCChHHHHHHHhccCC-CCceEEEEEecCCCccc---ccchHHHHHHhhhcCCCcEEEEeccccc
Q 015729 109 NVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGV---TNNLSKVRKLLDEYRHPALFLVDGVSSI 180 (401)
Q Consensus 109 ~~~~v~~~~~~~~d~~~le~~~~~~~~-~~~~~i~~~~~~n~tG~---~~~l~~i~~l~~~~~~~~~li~D~a~~~ 180 (401)
+++.+. .+...+++++..+++...+ ...+++++.-.. .+|. +.|+..+.-+ ++ .+.+||+|.+|+.
T Consensus 117 kpV~lK--rG~~~t~~e~l~aaeyi~~~Gn~~viLcERG~-tf~y~r~~~D~~~ip~~-k~--~~~PVi~DpSHsv 186 (258)
T TIGR01362 117 RIVNVK--KGQFLSPWDMKNVVEKVLSTGNKNILLCERGT-SFGYNNLVVDMRSLPIM-RE--LGCPVIFDATHSV 186 (258)
T ss_pred CeEEec--CCCcCCHHHHHHHHHHHHHcCCCcEEEEeCCC-CcCCCCcccchhhhHHH-Hh--cCCCEEEeCCccc
Confidence 444443 3333567665444332100 133555555444 4455 4577776655 44 5799999999983
No 462
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=35.46 E-value=3.9e+02 Score=25.74 Aligned_cols=75 Identities=19% Similarity=0.018 Sum_probs=45.3
Q ss_pred CCCCeEEEEcCCcchHH---H---HH-HHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc
Q 015729 82 SPGDRIISFLIGQFSLL---W---ID-QQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 82 ~~gd~vl~~~~~~~~~~---~---~~-~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
+++|.|+.+.++.++.. . .. .....|+++.. ....-+..+.++++..++. -+|+-++..|. ..-
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~h~SgHa~~~dl~~~i~~---~~Pk~~ipvHg-----e~~ 387 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIK-RIHVSGHASQEDHKLLLRL---LKPKYIIPVHG-----EYR 387 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEe-ceEecCCCCHHHHHHHHHH---hCCCEEEecCC-----cHH
Confidence 47889998887666654 1 11 23346666542 1223345578888887764 25687777764 334
Q ss_pred chHHHHHHhhh
Q 015729 155 NLSKVRKLLDE 165 (401)
Q Consensus 155 ~l~~i~~l~~~ 165 (401)
.+...++++++
T Consensus 388 ~~~~~~~~a~~ 398 (422)
T TIGR00649 388 MLINHTKLAEE 398 (422)
T ss_pred HHHHHHHHHHH
Confidence 55666667766
No 463
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=34.77 E-value=4.3e+02 Score=25.59 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=47.2
Q ss_pred CCCCCeEEEEcCCcchHH----HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 81 LSPGDRIISFLIGQFSLL----WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
...|.+|.+.+...+... +..+++..|+.+..+. +++++.+.+.+.. ....|++..+....-....+
T Consensus 248 ~~~g~~V~li~~D~~r~~a~eqL~~~a~~~~vp~~~~~-------~~~~l~~~l~~~~--~~DlVlIDt~G~~~~d~~~~ 318 (424)
T PRK05703 248 LYGKKKVALITLDTYRIGAVEQLKTYAKIMGIPVEVVY-------DPKELAKALEQLR--DCDVILIDTAGRSQRDKRLI 318 (424)
T ss_pred hcCCCeEEEEECCccHHHHHHHHHHHHHHhCCceEccC-------CHHhHHHHHHHhC--CCCEEEEeCCCCCCCCHHHH
Confidence 355677777766444321 2234555565443321 4556666665432 34678888654322222234
Q ss_pred HHHHHHhhh--cCCCcEEEEecccc
Q 015729 157 SKVRKLLDE--YRHPALFLVDGVSS 179 (401)
Q Consensus 157 ~~i~~l~~~--~~~~~~li~D~a~~ 179 (401)
+++.++.+. .+..+++++++...
T Consensus 319 ~~L~~ll~~~~~~~~~~LVl~a~~~ 343 (424)
T PRK05703 319 EELKALIEFSGEPIDVYLVLSATTK 343 (424)
T ss_pred HHHHHHHhccCCCCeEEEEEECCCC
Confidence 556666552 23467888887643
No 464
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated
Probab=34.71 E-value=1.5e+02 Score=27.48 Aligned_cols=24 Identities=13% Similarity=0.279 Sum_probs=14.0
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccc
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
.|.+.|.+.+++ ++-++++++.+.
T Consensus 241 lD~~~i~~~~~~--t~~vv~vEE~~~ 264 (327)
T CHL00144 241 LDLGTISKSVKK--THKVLIVEECMK 264 (327)
T ss_pred CCHHHHHHHHHh--hCcEEEEECCCC
Confidence 355556666666 555555665543
No 465
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=33.20 E-value=3.2e+02 Score=23.55 Aligned_cols=70 Identities=9% Similarity=0.025 Sum_probs=46.6
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a 177 (401)
...+.+..|.+++..-.+ ..++++.+.+.+ .++.++.++...+ .....++++.+..++.+.++.|++=++
T Consensus 108 v~~~l~~~G~~Vi~LG~~----vp~e~~v~~~~~---~~~~~V~lS~~~~--~~~~~~~~~i~~L~~~~~~~~i~vGG~ 177 (213)
T cd02069 108 VGVILSNNGYEVIDLGVM----VPIEKILEAAKE---HKADIIGLSGLLV--PSLDEMVEVAEEMNRRGIKIPLLIGGA 177 (213)
T ss_pred HHHHHHhCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEccchh--ccHHHHHHHHHHHHhcCCCCeEEEECh
Confidence 445678889887766544 468888888876 4678888875433 234467777777776445777776553
No 466
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=32.61 E-value=40 Score=29.91 Aligned_cols=26 Identities=19% Similarity=0.129 Sum_probs=15.4
Q ss_pred EEecCChhHHHHHHHhccCCCCCeEEEE
Q 015729 63 FLIPTTGTGAWESALTNTLSPGDRIISF 90 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 90 (401)
+.+.+|.++|-.++ ..+...|. |+++
T Consensus 3 ILvlgGTtE~r~la-~~L~~~g~-v~~s 28 (249)
T PF02571_consen 3 ILVLGGTTEGRKLA-ERLAEAGY-VIVS 28 (249)
T ss_pred EEEEechHHHHHHH-HHHHhcCC-EEEE
Confidence 56667777777654 34455555 4444
No 467
>PRK08462 biotin carboxylase; Validated
Probab=32.49 E-value=2.9e+02 Score=26.79 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=24.2
Q ss_pred CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEE
Q 015729 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (401)
Q Consensus 121 ~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li 173 (401)
.|.+.+.+.+++ .++.+|+-.. |.+.....++++|++ .|+.++
T Consensus 63 ~~~~~l~~~~~~---~~~D~i~pg~-----g~lse~~~~a~~~e~--~Gi~~~ 105 (445)
T PRK08462 63 LNIPAIISAAEI---FEADAIFPGY-----GFLSENQNFVEICSH--HNIKFI 105 (445)
T ss_pred CCHHHHHHHHHH---cCCCEEEECC-----CccccCHHHHHHHHH--CCCeEE
Confidence 356677776665 3455554432 333334566677777 776555
No 468
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=32.47 E-value=2.5e+02 Score=22.06 Aligned_cols=71 Identities=15% Similarity=0.042 Sum_probs=45.7
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcC-CCcEEEEecc
Q 015729 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR-HPALFLVDGV 177 (401)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~-~~~~li~D~a 177 (401)
.....+..|.+++..-.+ ..++.+.+++.+ +++.++.++.-. +.....++++.+.+++.. .++.+++=++
T Consensus 19 v~~~L~~~GfeVidLG~~----v~~e~~v~aa~~---~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 19 LDHAFTEAGFNVVNLGVL----SPQEEFIDAAIE---TDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 345667788887766544 357777666655 456788887543 233445788888888832 3667777655
Q ss_pred c
Q 015729 178 S 178 (401)
Q Consensus 178 ~ 178 (401)
.
T Consensus 90 ~ 90 (128)
T cd02072 90 L 90 (128)
T ss_pred C
Confidence 3
No 469
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=32.26 E-value=77 Score=24.04 Aligned_cols=51 Identities=10% Similarity=0.136 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHhhCCeEEc-----cCCCCCCCcEEEEeecccCCHHHHHHHHHHHHHHHHh
Q 015729 317 INSSEIVRRAWQRYNLSLG-----LGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKD 372 (401)
Q Consensus 317 ~~~~~l~~~L~~~~~i~v~-----~g~~~~~~~~~Ri~~~~~~~~~di~~~~~~i~~~l~~ 372 (401)
.|+..+.+.|.++ |+.+. .|+-..+...+=++ .+++++|++++.|++-+++
T Consensus 11 ~Da~~l~~~L~~~-g~~~TkLsstGGFLr~GNtTlliG----vede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 11 EDADDLSDALNEN-GFRVTKLSSTGGFLREGNTTLLIG----VEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHHHHHT-T--EEEEEEEETTTTEEEEEEEEE----EEGGGHHHHHHHHHHHH--
T ss_pred hhHHHHHHHHHHC-CceEEEEecccceeccCCEEEEEE----ecHHHHHHHHHHHHHhhcC
Confidence 3678899999866 76653 22332111224444 4789999999999998863
No 470
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional
Probab=31.36 E-value=2e+02 Score=27.03 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=16.1
Q ss_pred cchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 154 NNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 154 ~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
.|.+.|.+.+++ .+-++++++....|
T Consensus 273 ld~e~i~~~~~~--~~~IvvvEE~~~~G 298 (355)
T PTZ00182 273 WDRETIVKSVKK--TGRCVIVHEAPPTC 298 (355)
T ss_pred CCHHHHHHHHhc--CCEEEEEEeCCCCC
Confidence 466667777777 66666666554433
No 471
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=31.15 E-value=84 Score=28.07 Aligned_cols=53 Identities=21% Similarity=0.238 Sum_probs=34.5
Q ss_pred cEEEEeecccCCHHHHHHHHHHHHHHHHhcCCC--------CCcchHHHHHHHHHHccCCC
Q 015729 344 KVFRIGHLGHLNELQLLGCLAGVEMILKDVGYP--------VKLGSGVAAASAYLQNNIPM 396 (401)
Q Consensus 344 ~~~Ri~~~~~~~~~di~~~~~~i~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 396 (401)
..+.+|+.-+.+.+.+-+-.+.+++.++++|++ +....++.++..|++.++|.
T Consensus 133 tFVh~sfprhms~~~l~~Rr~~M~~~C~~lGi~fv~~taPDP~sd~gv~gaqqfIlE~vp~ 193 (275)
T PF12683_consen 133 TFVHYSFPRHMSYELLARRRDIMEEACKDLGIKFVEVTAPDPTSDVGVAGAQQFILEDVPK 193 (275)
T ss_dssp -EEEEEETTGGGSHHHHHHHHHHHHHHHHCT--EEEEEE---SSTCHHHHHHHHHHHHHHH
T ss_pred eEEEEechhhcchHHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcHHHHHHHHHHHHH
Confidence 456776666667777777777788888888875 23334677888888777763
No 472
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=30.78 E-value=4.8e+02 Score=24.90 Aligned_cols=71 Identities=20% Similarity=0.112 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (401)
.+...+..+.|++++|..++ . + .--...+.-.+.. ..-.|.+|.+...+.....+...+...|++++.+-.
T Consensus 235 ~~~t~~~l~~la~~~g~~~~--~-i-~~e~~~~~~~l~~~~~~l~Gkrv~i~g~~~~~~~la~~L~elGm~vv~~~t 307 (396)
T cd01979 235 PDGTRAWLEAICSAFGIFPS--V-L-AEREARAWRALEPYLDLLRGKSIFFMGDNLLEIPLARFLTRCGMIVVEVGT 307 (396)
T ss_pred hHHHHHHHHHHHHHhCCChh--H-H-HHHHHHHHHHHHHHHHhhcCCEEEEECCchHHHHHHHHHHHCCCEEEeeCC
Confidence 35566777778888875331 1 1 1111122222211 112467777664433444456666678998887744
No 473
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=30.46 E-value=2e+02 Score=26.70 Aligned_cols=68 Identities=18% Similarity=0.062 Sum_probs=38.1
Q ss_pred EEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcC--CcEEEEeCCCCCCCChHHHHHHHhcc
Q 015729 63 FLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLN--FNVDVVESDWGEGAKLDVLASKLAAD 133 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g--~~~~~v~~~~~~~~d~~~le~~~~~~ 133 (401)
+++|+|+=.--......+++.|+.|++.++=.-+.. .....+..+ -.+.++..|- .|.+.|++.+++.
T Consensus 5 VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl---~D~~~L~kvF~~~ 76 (343)
T KOG1371|consen 5 VLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDL---NDAEALEKLFSEV 76 (343)
T ss_pred EEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEecc---CCHHHHHHHHhhc
Confidence 566655433333344567889999999988222221 112222222 3444444443 3899999999863
No 474
>cd00454 Trunc_globin Truncated hemoglobins (trHbs) are a family of oxygen-binding heme proteins found in cyanobacteria, eubacteria, unicellular eukaryotes, and plants. The truncated hemoglobins have a characteristic two-over-two alpha helical folding pattern that is distinct from the three-over-three pattern found in other globins. A subset of these have been demonstrated to form homodimers.
Probab=30.38 E-value=67 Score=24.31 Aligned_cols=40 Identities=18% Similarity=0.298 Sum_probs=31.9
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHc
Q 015729 353 HLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQN 392 (401)
Q Consensus 353 ~~~~~di~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 392 (401)
.+++++.+..++.+.+++++.+.+.++...+.+..+-+..
T Consensus 72 ~I~~~~f~~~l~~l~~al~~~~~~~~~~~~~~~~~~~~~~ 111 (116)
T cd00454 72 PITEEEFDAWLELLRDALDELGVPAELADALLARAERIAD 111 (116)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999887777765555554443
No 475
>PLN02591 tryptophan synthase
Probab=30.27 E-value=3.9e+02 Score=23.72 Aligned_cols=82 Identities=9% Similarity=0.048 Sum_probs=44.5
Q ss_pred CeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCccccc----chHHH
Q 015729 85 DRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN----NLSKV 159 (401)
Q Consensus 85 d~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~----~l~~i 159 (401)
|-+++++..+-... +...++..|+..+.+-.+ . .+.+.+++.... ....+++......||... .+++.
T Consensus 108 ~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P-t--t~~~ri~~ia~~----~~gFIY~Vs~~GvTG~~~~~~~~~~~~ 180 (250)
T PLN02591 108 HGLVVPDLPLEETEALRAEAAKNGIELVLLTTP-T--TPTERMKAIAEA----SEGFVYLVSSTGVTGARASVSGRVESL 180 (250)
T ss_pred CEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC-C--CCHHHHHHHHHh----CCCcEEEeeCCCCcCCCcCCchhHHHH
Confidence 66777776432111 456677777766665422 1 134555655543 224566665566677643 24554
Q ss_pred HHHhhhcCCCcEEEE
Q 015729 160 RKLLDEYRHPALFLV 174 (401)
Q Consensus 160 ~~l~~~~~~~~~li~ 174 (401)
.+.++++ .++++++
T Consensus 181 i~~vk~~-~~~Pv~v 194 (250)
T PLN02591 181 LQELKEV-TDKPVAV 194 (250)
T ss_pred HHHHHhc-CCCceEE
Confidence 5555553 4666664
No 476
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=30.13 E-value=36 Score=26.35 Aligned_cols=40 Identities=15% Similarity=0.017 Sum_probs=24.7
Q ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCC
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 120 (401)
+...+.++||.|++...+..... +....+++.|-++++++
T Consensus 74 AAArl~~~GD~VII~sy~~~~~~-----e~~~~~P~vv~vd~~N~ 113 (126)
T TIGR00223 74 AAARCVSVGDIVIIASYVTMPDE-----EARTHRPNVAYFEGDNE 113 (126)
T ss_pred HHHhcCCCCCEEEEEECCcCCHH-----HHhcCCCEEEEECCCCC
Confidence 44568899999999877665432 22234555555555543
No 477
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=29.98 E-value=3.7e+02 Score=23.35 Aligned_cols=11 Identities=27% Similarity=0.594 Sum_probs=5.1
Q ss_pred EEEecHHHHHH
Q 015729 211 IVCASPKALEA 221 (401)
Q Consensus 211 ~l~~~~~~~~~ 221 (401)
+++.++...+.
T Consensus 203 ~v~Ig~~ta~a 213 (240)
T PRK09189 203 FLCLSARVAAA 213 (240)
T ss_pred eEEeCHHHHHH
Confidence 44455554443
No 478
>TIGR01389 recQ ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ.
Probab=29.96 E-value=6e+02 Score=25.78 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=44.3
Q ss_pred ecCChhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEE
Q 015729 65 IPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAIC 142 (401)
Q Consensus 65 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~ 142 (401)
.|++|...... +-++...|-. +++.| .-+.. .....+..|+.+..+..+ .+.++-.+....-...+.++++
T Consensus 36 PTG~GKTl~y~-lpal~~~g~~-lVisP-l~sL~~dq~~~l~~~gi~~~~~~s~----~~~~~~~~~~~~l~~~~~~il~ 108 (591)
T TIGR01389 36 PTGGGKSLCYQ-VPALLLKGLT-VVISP-LISLMKDQVDQLRAAGVAAAYLNST----LSAKEQQDIEKALVNGELKLLY 108 (591)
T ss_pred CCCccHhHHHH-HHHHHcCCcE-EEEcC-CHHHHHHHHHHHHHcCCcEEEEeCC----CCHHHHHHHHHHHhCCCCCEEE
Confidence 35666554433 2334445544 44445 23222 122344467766655433 2343333222211112445555
Q ss_pred EEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 143 IVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 143 ~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
++. . .+.. ..+.+..+.. .=.+||+|++|...
T Consensus 109 ~tp-e----~l~~-~~~~~~l~~~-~l~~iViDEaH~i~ 140 (591)
T TIGR01389 109 VAP-E----RLEQ-DYFLNMLQRI-PIALVAVDEAHCVS 140 (591)
T ss_pred ECh-h----HhcC-hHHHHHHhcC-CCCEEEEeCCcccc
Confidence 542 2 1111 1222222221 33489999999753
No 479
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=29.51 E-value=47 Score=29.45 Aligned_cols=29 Identities=21% Similarity=0.131 Sum_probs=16.1
Q ss_pred EEecCChhHHHHHHHhccCCCCCeEEEEcC
Q 015729 63 FLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 92 (401)
+.+.+|.+++-.++ ..+.+.|-.++++..
T Consensus 5 IlvlgGT~egr~la-~~L~~~g~~v~~Sva 33 (248)
T PRK08057 5 ILLLGGTSEARALA-RALAAAGVDIVLSLA 33 (248)
T ss_pred EEEEechHHHHHHH-HHHHhCCCeEEEEEc
Confidence 56667777776654 233344555555544
No 480
>PRK06139 short chain dehydrogenase; Provisional
Probab=29.46 E-value=3.6e+02 Score=24.94 Aligned_cols=80 Identities=15% Similarity=0.055 Sum_probs=41.4
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhc---cCCCC
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA---DTAHT 137 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~---~~~~~ 137 (401)
.++..|++.++-..+ ..+...|.+|++......... ....++..|.++..+++|-. |.+.+++.+++ .. .+
T Consensus 9 ~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~---d~~~v~~~~~~~~~~~-g~ 84 (330)
T PRK06139 9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVT---DADQVKALATQAASFG-GR 84 (330)
T ss_pred EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC---CHHHHHHHHHHHHHhc-CC
Confidence 344445555554444 456778888887754222111 22233345667766666543 56666665542 11 24
Q ss_pred ceEEEEEec
Q 015729 138 IKAICIVHN 146 (401)
Q Consensus 138 ~~~i~~~~~ 146 (401)
+..++-+..
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 555555443
No 481
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=29.33 E-value=4.8e+02 Score=24.40 Aligned_cols=55 Identities=15% Similarity=0.095 Sum_probs=32.4
Q ss_pred CCCChHHHHHHHhccCCCCceEEEEE--ecCCCccccc------chHHHHHHhhh-cCCCcEEEEecc
Q 015729 119 EGAKLDVLASKLAADTAHTIKAICIV--HNETATGVTN------NLSKVRKLLDE-YRHPALFLVDGV 177 (401)
Q Consensus 119 ~~~d~~~le~~~~~~~~~~~~~i~~~--~~~n~tG~~~------~l~~i~~l~~~-~~~~~~li~D~a 177 (401)
+..+++..+++++. ....+.+. ..++-++... .+..+.+.++. +.+++.||.|.-
T Consensus 157 NV~T~e~a~~Li~a----GAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGG 220 (343)
T TIGR01305 157 NVVTGEMVEELILS----GADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGG 220 (343)
T ss_pred cccCHHHHHHHHHc----CCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCC
Confidence 35688988888874 33455444 2233344332 35555555554 337999999953
No 482
>PRK14974 cell division protein FtsY; Provisional
Probab=29.08 E-value=4.8e+02 Score=24.36 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=42.6
Q ss_pred cCCCCCeEEEEcCCcchH----HHHHHHHHcCCcEEEEeCCCCCCCChHHH-HHHHhccCCCCceEEEEEecCCCccccc
Q 015729 80 TLSPGDRIISFLIGQFSL----LWIDQQQRLNFNVDVVESDWGEGAKLDVL-ASKLAADTAHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l-e~~~~~~~~~~~~~i~~~~~~n~tG~~~ 154 (401)
+...|-+|.+.....+-. .+...++..|+.+.... . ..|+..+ .+.+.........+|++..+........
T Consensus 164 l~~~g~~V~li~~Dt~R~~a~eqL~~~a~~lgv~v~~~~--~--g~dp~~v~~~ai~~~~~~~~DvVLIDTaGr~~~~~~ 239 (336)
T PRK14974 164 LKKNGFSVVIAAGDTFRAGAIEQLEEHAERLGVKVIKHK--Y--GADPAAVAYDAIEHAKARGIDVVLIDTAGRMHTDAN 239 (336)
T ss_pred HHHcCCeEEEecCCcCcHHHHHHHHHHHHHcCCceeccc--C--CCCHHHHHHHHHHHHHhCCCCEEEEECCCccCCcHH
Confidence 444566776665433322 13445666676554322 1 1244332 2222210002345777775432221111
Q ss_pred chHHHHHHhhh-cCCCcEEEEeccc
Q 015729 155 NLSKVRKLLDE-YRHPALFLVDGVS 178 (401)
Q Consensus 155 ~l~~i~~l~~~-~~~~~~li~D~a~ 178 (401)
-++++.++.+. .|..++++.|+..
T Consensus 240 lm~eL~~i~~~~~pd~~iLVl~a~~ 264 (336)
T PRK14974 240 LMDELKKIVRVTKPDLVIFVGDALA 264 (336)
T ss_pred HHHHHHHHHHhhCCceEEEeecccc
Confidence 23444444333 2367778888754
No 483
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=28.49 E-value=56 Score=27.29 Aligned_cols=30 Identities=17% Similarity=0.133 Sum_probs=14.6
Q ss_pred ChhHHHHHHHhccCCCCC-eEEEEcCCcchH
Q 015729 68 TGTGAWESALTNTLSPGD-RIISFLIGQFSL 97 (401)
Q Consensus 68 g~t~a~~~~~~~~~~~gd-~vl~~~~~~~~~ 97 (401)
|-|.++-.++..+...+. +|+++.|...+.
T Consensus 9 GKSa~lGl~~a~l~~~~~~~I~vtAP~~~~~ 39 (177)
T PF05127_consen 9 GKSAALGLAAAALIQKGKIRILVTAPSPENV 39 (177)
T ss_dssp SHHHHHHHCCCCSSS-----EEEE-SS--S-
T ss_pred CHHHHHHHHHHHHHHhcCceEEEecCCHHHH
Confidence 556666666666666664 788887754443
No 484
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=28.14 E-value=4.2e+02 Score=23.34 Aligned_cols=97 Identities=8% Similarity=-0.070 Sum_probs=54.3
Q ss_pred hhHHHHHHHhccCCCCCeEEEEcCCcchHH--HHHHHHHcCCcEEEEe---CCCC---CCCChHHHHHHHhccCCCCceE
Q 015729 69 GTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVE---SDWG---EGAKLDVLASKLAADTAHTIKA 140 (401)
Q Consensus 69 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~---~~~~---~~~d~~~le~~~~~~~~~~~~~ 140 (401)
.+.|+..++..+ .-.+|-+.+|...... .....+..|++++.+. ...+ ++++++.+.+.+.+-......+
T Consensus 107 ~~~A~~~AL~al--g~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aDA 184 (239)
T TIGR02990 107 PSSAAVDGLAAL--GVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDADA 184 (239)
T ss_pred HHHHHHHHHHHc--CCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCCE
Confidence 344444444443 2256777777222222 4456677888887763 2222 3578998888877532245678
Q ss_pred EEEEecCCCcccccchHHHHHHhhhcCCCcEEEE
Q 015729 141 ICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (401)
Q Consensus 141 i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~ 174 (401)
|+++..+ +-.++-|.++=++ .|.+||.
T Consensus 185 ifisCTn-----Lrt~~vi~~lE~~--lGkPVls 211 (239)
T TIGR02990 185 LFLSCTA-----LRAATCAQRIEQA--IGKPVVT 211 (239)
T ss_pred EEEeCCC-----chhHHHHHHHHHH--HCCCEEE
Confidence 8887432 2223444444445 6667653
No 485
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=28.08 E-value=1.6e+02 Score=29.82 Aligned_cols=265 Identities=14% Similarity=0.113 Sum_probs=124.3
Q ss_pred cccccCCCcCChHHHHHHHccCc------CCCC----CccHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHh
Q 015729 10 NHLFVPGPVHIPDQVIRAMNRNN------EDYR----SPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALT 78 (401)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~------~~~~----~~~~~~~~~~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~ 78 (401)
.|+.++|-...+++-.+...... ..|. +....+.....|=++..+++.. .+..++++. .++|+...+.
T Consensus 22 ~yldhag~tl~sesq~~g~~~~sq~~e~~nphs~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~vae 100 (728)
T KOG2142|consen 22 AYLDHAGRTLFSESQLEGVAFQSQSSENANPHSHLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVAE 100 (728)
T ss_pred HHHHhhhhhhhhhcccchhhhhhhccccCCCcccccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHHH
Confidence 46666666666665555522211 1111 1223455666666777788765 334467777 9999998876
Q ss_pred cc--CCCCCeEEEEcCCcchHH--H-HHHH-HHcCCcEEEE-eCC---CCCCCChHHHHHHHhccCCCCceEEEEEecCC
Q 015729 79 NT--LSPGDRIISFLIGQFSLL--W-IDQQ-QRLNFNVDVV-ESD---WGEGAKLDVLASKLAADTAHTIKAICIVHNET 148 (401)
Q Consensus 79 ~~--~~~gd~vl~~~~~~~~~~--~-~~~~-~~~g~~~~~v-~~~---~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n 148 (401)
++ ...+.++--....++++. . ..++ ...|+.+.-+ ... ....+.+.+...-+. ...+.......|
T Consensus 101 ~fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~ls-----~~~L~~g~a~~n 175 (728)
T KOG2142|consen 101 AFPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANLS-----EHSLFGGAAQSN 175 (728)
T ss_pred hCccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccCcc-----cchhcccchhcc
Confidence 63 445555443333222221 0 0011 1122222222 111 111111111111111 012223333334
Q ss_pred CcccccchHHHHHHhhhcCCCcEEEEecccccCcceeccCcccceEEEecCCCcccCCCcceEEEecHHHHHHhccCCCC
Q 015729 149 ATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (401)
Q Consensus 149 ~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~~K~l~g~~g~G~l~~~~~~~~~~~~~~~~ 228 (401)
-.|..+.. .|..... .+.+=++++|++.-..+.+++.+.+.+|.... ..|.|+-+. |.|....+..+... -+..
T Consensus 176 feg~kik~-ri~d~L~-ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet--gAvlv~~r~A~~~G-gkt~ 249 (728)
T KOG2142|consen 176 FEGDKIKL-RIMDRLN-IPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET--GAVLVMNRSAELKG-GKTA 249 (728)
T ss_pred cccceeee-eeecccc-cCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCc--hhhHHHhhhhHhhc-Cccc
Confidence 44443111 1111111 23667899999987778888999999998888 889774344 44444344333332 1111
Q ss_pred ccccch-------HHHHHHhhcCCCCCCCCcHHHHHHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHH
Q 015729 229 RVFFDW-------KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE--GLENVIERHRRLGKATRLAVEA 291 (401)
Q Consensus 229 ~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~a~~~al~~~~~~--g~~~~~~~~~~~~~~l~~~L~~ 291 (401)
..++.| .+..++++.|+ .+...++.....+....+- ++..+......+.++..-.|+.
T Consensus 250 sa~f~wp~~~l~s~~lkkr~e~gk-----~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda 316 (728)
T KOG2142|consen 250 SAEFSWPMLYLLSEKLKKRFEDGK-----LRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDA 316 (728)
T ss_pred eeecccchHHHHHHHHHHHHhhcc-----ccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhh
Confidence 112222 23456777775 4444334444444433321 2344444444455544444544
No 486
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=27.56 E-value=4.4e+02 Score=23.37 Aligned_cols=123 Identities=14% Similarity=0.109 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCC--hhHHHHHHHhccCCCCCeEEEEcCCcchHH-HHHHHHHcCC--cEEEEeCCCC
Q 015729 44 TKTLLEDIKKIFKTTSGTPFLIPTT--GTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNF--NVDVVESDWG 118 (401)
Q Consensus 44 ~~~l~~~la~~~g~~~~~~i~~~~g--~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~--~~~~v~~~~~ 118 (401)
..++...+.+..+.+. ++=.+. |-.++. +...+.++.+|+..+....... .....+..|. ++..+.-+
T Consensus 67 ~g~lL~~l~~~~~ak~---iLEiGT~~GySal~--la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~-- 139 (247)
T PLN02589 67 EGQFLNMLLKLINAKN---TMEIGVYTGYSLLA--TALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP-- 139 (247)
T ss_pred HHHHHHHHHHHhCCCE---EEEEeChhhHHHHH--HHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--
Confidence 3355555555555443 333332 222332 2223455567777766322111 2234455554 23333211
Q ss_pred CCCChHHHHHHHhcc-CCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 119 EGAKLDVLASKLAAD-TAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 119 ~~~d~~~le~~~~~~-~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
-.+.|.+..... ......+|++.+. .......++.+.++.+ .|.+|++|.+...|
T Consensus 140 ---a~e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~---~GGviv~DNvl~~G 195 (247)
T PLN02589 140 ---ALPVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK---VGGVIGYDNTLWNG 195 (247)
T ss_pred ---HHHHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC---CCeEEEEcCCCCCC
Confidence 234444433221 0135678888853 2222223444444433 67789999886555
No 487
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=27.50 E-value=5.6e+02 Score=24.60 Aligned_cols=74 Identities=20% Similarity=0.149 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc--cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG 118 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~--~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 118 (401)
.+...++.+.|++++|.+.+. +. . -...+..++.. ..-.|++|.+...+-....+...+...|++++.+-....
T Consensus 233 i~~T~~~l~~la~~~g~~~~~-~~--~-e~~~~~~~l~~~~~~l~Gkrv~i~gd~~~~~~l~~~L~elGm~~v~~~t~~~ 308 (407)
T TIGR01279 233 PDGTRRFLEAIAAEFGIEVDK-LS--E-REAQAWRALEPHTQLLRGKKIFFFGDNLLELPLARFLKRCGMEVVECGTPYI 308 (407)
T ss_pred HHHHHHHHHHHHHHhCcCHHH-HH--H-HHHHHHHHHHHHHHhcCCCEEEEECCchHHHHHHHHHHHCCCEEEEecCCCC
Confidence 455667778888888876421 10 0 01111112211 122477777665433434455666668998887765443
No 488
>PLN03013 cysteine synthase
Probab=27.16 E-value=2.2e+02 Score=27.63 Aligned_cols=54 Identities=15% Similarity=0.155 Sum_probs=30.1
Q ss_pred eEEecCChhHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCC
Q 015729 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD 116 (401)
Q Consensus 62 ~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 116 (401)
.++-.++|..++-.++.+-. .|=++.+..|...+..-....+.+|++++.++.+
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~-~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAAS-RGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEEECCcHHHHHHHHHHHH-cCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 36667777777766654422 2223333333334443345677788888877643
No 489
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=27.07 E-value=1.2e+02 Score=26.79 Aligned_cols=27 Identities=15% Similarity=0.144 Sum_probs=23.2
Q ss_pred ccchHHHHHHhhhcCCCcEEEEecccccC
Q 015729 153 TNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (401)
Q Consensus 153 ~~~l~~i~~l~~~~~~~~~li~D~a~~~~ 181 (401)
....+.+.++.++ +++-+++|++|-+.
T Consensus 52 ~l~~e~l~~~l~e--~~i~llIDATHPyA 78 (257)
T COG2099 52 FLGAEGLAAFLRE--EGIDLLIDATHPYA 78 (257)
T ss_pred cCCHHHHHHHHHH--cCCCEEEECCChHH
Confidence 3467899999999 99999999998754
No 490
>PF06877 RraB: Regulator of ribonuclease activity B; InterPro: IPR009671 This entry occurs in several hypothetical bacterial proteins of around 120 residues in length. The function of these proteins is unknown. The protein structure has been determined for one member of this group, the hypothetical protein VCO424 from Vibrio cholerae; it has an alpha+beta sandwich fold.; PDB: 1NXI_A.
Probab=27.05 E-value=2.6e+02 Score=20.60 Aligned_cols=85 Identities=11% Similarity=0.008 Sum_probs=44.8
Q ss_pred HHHHHHHHcCCccccCCCccCCceeEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC---CCCCcE-EEEeecccCCHHHH
Q 015729 284 ATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN---KVAGKV-FRIGHLGHLNELQL 359 (401)
Q Consensus 284 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~v~~g~~---~~~~~~-~Ri~~~~~~~~~di 359 (401)
.+.+.|.+.|..+..+ ...-.++.+++.-+...++..+.+. |..+..-.. ...+.+ ++++....++.+.|
T Consensus 8 ~vl~~L~~~Gddl~~~-----r~ieh~~~f~~~~~~~~f~~~~~~~-g~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~I 81 (104)
T PF06877_consen 8 EVLEALEEDGDDLSKP-----RPIEHWFYFEDEEDAEKFAEELEKL-GYEVESAEEDEEDGDGPYCLDISREMVLDYEDI 81 (104)
T ss_dssp HHHHHHHHHT--TTS------EEEEEEEEES-HHHHHHHHHHHHHH-S---B----B-SS-SSBEEEEEEEEE-S-HHHH
T ss_pred HHHHHHHhcCCCCCCC-----eEEEEEEEeCCHHHHHHHHHHHHHC-CCEEEEeecccCCCCceEEEEEEEecCCCHHHH
Confidence 3445555556655432 2233445565544566788888765 766554322 111222 67766667788999
Q ss_pred HHHHHHHHHHHHhcC
Q 015729 360 LGCLAGVEMILKDVG 374 (401)
Q Consensus 360 ~~~~~~i~~~l~~~~ 374 (401)
......|....++.+
T Consensus 82 ~~~~~~l~~lA~~~~ 96 (104)
T PF06877_consen 82 NAITQELEDLAKEFG 96 (104)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999988887764
No 491
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=27.00 E-value=41 Score=26.11 Aligned_cols=40 Identities=20% Similarity=0.103 Sum_probs=24.7
Q ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCC
Q 015729 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120 (401)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 120 (401)
+...+.++||.|++...++.... +..+.+++.|-++++++
T Consensus 74 AAAr~~~~GD~vII~ay~~~~~~-----e~~~~~P~vv~vd~~N~ 113 (126)
T PRK05449 74 AAARLVQVGDLVIIAAYAQMDEE-----EAKTHKPKVVFVDEDNR 113 (126)
T ss_pred HHHhcCCCCCEEEEEECccCCHH-----HHhcCCCEEEEECCCCC
Confidence 44567899999999877655432 22344555555555543
No 492
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=26.69 E-value=3e+02 Score=26.61 Aligned_cols=84 Identities=8% Similarity=-0.064 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHhc-cCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCC
Q 015729 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE 119 (401)
Q Consensus 41 ~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~-~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 119 (401)
.+...++.+.|++++|.+.++.+. .--...+..+... ..-.|.+|.+....-....+.......|.+++.+-.....
T Consensus 257 ~~~t~~~l~~l~~~~g~~~~~~~~--~~r~~~~~~~~~~~~~l~gk~v~i~~~~~~~~~l~~~L~e~G~~v~~v~~~~~~ 334 (428)
T cd01965 257 LKATDEFLRALSKLSGKPIPEELE--RERGRLLDAMLDSHFYLGGKRVAIAGDPDLLLGLSRFLLEMGAEPVAAVTGTDN 334 (428)
T ss_pred hHHHHHHHHHHHHHHCCCCCHHHH--HHHHHHHHHHHHHHHHhcCCEEEEEcChHHHHHHHHHHHHcCCcceEEEEcCCC
Confidence 455667778888888876432111 0011122222211 1224677777654333333556677789988877665443
Q ss_pred CCChHHH
Q 015729 120 GAKLDVL 126 (401)
Q Consensus 120 ~~d~~~l 126 (401)
..+.+.+
T Consensus 335 ~~~~~~~ 341 (428)
T cd01965 335 PPFEKRM 341 (428)
T ss_pred chhHHHH
Confidence 3333444
No 493
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=26.60 E-value=86 Score=24.46 Aligned_cols=47 Identities=9% Similarity=0.005 Sum_probs=24.6
Q ss_pred CChHHHHHHHhccCCCCceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEe
Q 015729 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 121 ~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D 175 (401)
++.+..++.+++--..++-+++++... .+.+++.++|++ ++++|+.=
T Consensus 65 l~~~~r~~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~--~~ipll~t 111 (127)
T PF02603_consen 65 LDEEERKERLEKLFSYNPPCIIVTRGL------EPPPELIELAEK--YNIPLLRT 111 (127)
T ss_dssp S-HHHHCCHHHHHCTTT-S-EEEETTT---------HHHHHHHHH--CT--EEEE
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHH--hCCcEEEc
Confidence 344444344433222456788888643 567889999999 99988753
No 494
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional
Probab=26.41 E-value=5.9e+02 Score=24.49 Aligned_cols=90 Identities=12% Similarity=0.079 Sum_probs=42.1
Q ss_pred cCCCCCeEEEEcCCcchH----HHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccC-CCCceEEEEEecCCCccccc
Q 015729 80 TLSPGDRIISFLIGQFSL----LWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT-AHTIKAICIVHNETATGVTN 154 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~-~~~~~~i~~~~~~n~tG~~~ 154 (401)
+...|.+|.+.+...+.. .|...++..++.+... .+++++.+.+..-. ......|++..+....-...
T Consensus 230 l~~~g~~V~lItaDtyR~gAveQLk~yae~lgvpv~~~-------~dp~dL~~al~~l~~~~~~D~VLIDTAGr~~~d~~ 302 (407)
T PRK12726 230 LLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELIVA-------TSPAELEEAVQYMTYVNCVDHILIDTVGRNYLAEE 302 (407)
T ss_pred HHHcCCeEEEEeCCccCccHHHHHHHHhhcCCCCEEec-------CCHHHHHHHHHHHHhcCCCCEEEEECCCCCccCHH
Confidence 344566666555433422 2555666666644322 25777766654311 01245677775432111111
Q ss_pred chHHHHHHhhh-cCCCcEEEEec
Q 015729 155 NLSKVRKLLDE-YRHPALFLVDG 176 (401)
Q Consensus 155 ~l~~i~~l~~~-~~~~~~li~D~ 176 (401)
-++++.++.+. ++.-++++.++
T Consensus 303 ~l~EL~~l~~~~~p~~~~LVLsa 325 (407)
T PRK12726 303 SVSEISAYTDVVHPDLTCFTFSS 325 (407)
T ss_pred HHHHHHHHhhccCCceEEEECCC
Confidence 24555555544 22333444443
No 495
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=26.38 E-value=3e+02 Score=22.37 Aligned_cols=73 Identities=11% Similarity=0.145 Sum_probs=41.2
Q ss_pred HhccCCCCCeEEEEcCCcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCceEEEEEecCCCcccccch
Q 015729 77 LTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (401)
Q Consensus 77 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~~~i~~~~~~n~tG~~~~l 156 (401)
+..+++.|-+|........ ... . ..++..+..+. .|++.+.+++.. ...++.+.+.++. .....
T Consensus 15 ~~~L~~~~~~V~~~~R~~~-~~~-~-----~~~~~~~~~d~---~d~~~~~~al~~-----~d~vi~~~~~~~~-~~~~~ 78 (183)
T PF13460_consen 15 AKQLLRRGHEVTALVRSPS-KAE-D-----SPGVEIIQGDL---FDPDSVKAALKG-----ADAVIHAAGPPPK-DVDAA 78 (183)
T ss_dssp HHHHHHTTSEEEEEESSGG-GHH-H-----CTTEEEEESCT---TCHHHHHHHHTT-----SSEEEECCHSTTT-HHHHH
T ss_pred HHHHHHCCCEEEEEecCch-hcc-c-----ccccccceeee---hhhhhhhhhhhh-----cchhhhhhhhhcc-ccccc
Confidence 3556666677777765322 211 1 33445555543 378999998873 3455555443333 23345
Q ss_pred HHHHHHhhh
Q 015729 157 SKVRKLLDE 165 (401)
Q Consensus 157 ~~i~~l~~~ 165 (401)
+.+.+.|++
T Consensus 79 ~~~~~a~~~ 87 (183)
T PF13460_consen 79 KNIIEAAKK 87 (183)
T ss_dssp HHHHHHHHH
T ss_pred ccccccccc
Confidence 667777777
No 496
>PRK07109 short chain dehydrogenase; Provisional
Probab=26.21 E-value=4.6e+02 Score=24.22 Aligned_cols=65 Identities=11% Similarity=0.084 Sum_probs=35.7
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH-HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHh
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~ 131 (401)
+++| |++.++-..+ ..+...|-+|++......... .....+..|.++..+.+|-. |.+.+++.++
T Consensus 11 vlIT-Gas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~---d~~~v~~~~~ 77 (334)
T PRK07109 11 VVIT-GASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVA---DAEAVQAAAD 77 (334)
T ss_pred EEEE-CCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCC---CHHHHHHHHH
Confidence 4444 4555554444 556677888877655322111 22223445677777776643 5666666554
No 497
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=26.18 E-value=4.7e+02 Score=26.82 Aligned_cols=69 Identities=19% Similarity=0.265 Sum_probs=45.5
Q ss_pred EEecCChhHHHHHHH-hccCCCCCeEEEEcCCcchHH----HHH---HHHHcCCcEEEEeCCCCCCCChHHHHHHHhc
Q 015729 63 FLIPTTGTGAWESAL-TNTLSPGDRIISFLIGQFSLL----WID---QQQRLNFNVDVVESDWGEGAKLDVLASKLAA 132 (401)
Q Consensus 63 i~~~~g~t~a~~~~~-~~~~~~gd~vl~~~~~~~~~~----~~~---~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~ 132 (401)
.++|+.+...|-..+ ..++..|-+|++++. .++.. +.. .-.+.|..+..|+.+-.---|.|+|.+.|-.
T Consensus 399 alVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS-~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~ 475 (866)
T COG4982 399 ALVTGASKGSIAAAVVARLLAGGATVIATTS-RLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGD 475 (866)
T ss_pred EEEecCCCcchHHHHHHHHHhCCcEEEEEcc-cccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcc
Confidence 456666666666544 568899999988866 34332 111 1123578899999887655588888888754
No 498
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=26.10 E-value=1.6e+02 Score=26.21 Aligned_cols=97 Identities=7% Similarity=0.083 Sum_probs=53.6
Q ss_pred EEecCChhHHHHHHHhccCCCCCeEEEEcC--CcchHH----HHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCC
Q 015729 63 FLIPTTGTGAWESALTNTLSPGDRIISFLI--GQFSLL----WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAH 136 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~--~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~ 136 (401)
++..+||...-.++..+.-.-|++|+..+- .+.+.. ....++..|++..+++.+.- +++ +..++.
T Consensus 21 ~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~---~~~-----~~~n~~- 91 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRM---DPE-----FKENPE- 91 (269)
T ss_pred EEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhc---chh-----hccCCC-
Confidence 455667776554444342233466654432 222221 34577778999999987632 321 222221
Q ss_pred CceEEEEEecCCCcccccchHHHHHHhhhcCCCcEEEEecccc
Q 015729 137 TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSS 179 (401)
Q Consensus 137 ~~~~i~~~~~~n~tG~~~~l~~i~~l~~~~~~~~~li~D~a~~ 179 (401)
.-+++|- ..=.+.|.+.+++ +|.-+++|++-+
T Consensus 92 --~rCY~CK-------~~v~~~l~~~a~~--~Gyd~V~dGtNa 123 (269)
T COG1606 92 --NRCYLCK-------RAVYSTLVEEAEK--RGYDVVADGTNA 123 (269)
T ss_pred --CcchHHH-------HHHHHHHHHHHHH--cCCCEEEeCCcH
Confidence 1123321 1124668899999 888899998754
No 499
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=26.10 E-value=5.1e+02 Score=23.70 Aligned_cols=98 Identities=13% Similarity=0.156 Sum_probs=45.9
Q ss_pred EEecCChhHHHHHHHhccCCCC--CeEEEEcC--CcchHHHHHHHHHcCCcEEEEeCCCCCCCChHHHHHHHhccCCCCc
Q 015729 63 FLIPTTGTGAWESALTNTLSPG--DRIISFLI--GQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTI 138 (401)
Q Consensus 63 i~~~~g~t~a~~~~~~~~~~~g--d~vl~~~~--~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~le~~~~~~~~~~~ 138 (401)
.++|.+-+..+...+......| -+|++... ...+..........|+.+..++.. .+--.+.+ +
T Consensus 118 ~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~Ds--------a~~~~m~~-----v 184 (301)
T TIGR00511 118 VVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVDS--------AVRYFMKE-----V 184 (301)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEehh--------HHHHHHHh-----C
Confidence 5555555544444443333233 34555543 111222344455568877777632 11112221 2
Q ss_pred -eEEEEEecCCCcccccc-h--HHHHHHhhhcCCCcEEEEe
Q 015729 139 -KAICIVHNETATGVTNN-L--SKVRKLLDEYRHPALFLVD 175 (401)
Q Consensus 139 -~~i~~~~~~n~tG~~~~-l--~~i~~l~~~~~~~~~li~D 175 (401)
++++-...-...|.+.. + -.++-.|+. +++++++=
T Consensus 185 d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~--~~vPv~V~ 223 (301)
T TIGR00511 185 DHVVVGADAITANGALINKIGTSQLALAARE--ARVPFMVA 223 (301)
T ss_pred CEEEECccEEecCCCEEEHHhHHHHHHHHHH--hCCCEEEE
Confidence 33333333344554443 2 246667777 77777754
No 500
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=25.87 E-value=4.9e+02 Score=23.38 Aligned_cols=90 Identities=16% Similarity=0.224 Sum_probs=45.3
Q ss_pred cCCCCCeEEEEcCCcchHH----HHHHHHHcCCcEEEEeCCCCCCCChHH-----HHHHHhccCCCCceEEEEEecCCCc
Q 015729 80 TLSPGDRIISFLIGQFSLL----WIDQQQRLNFNVDVVESDWGEGAKLDV-----LASKLAADTAHTIKAICIVHNETAT 150 (401)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~-----le~~~~~~~~~~~~~i~~~~~~n~t 150 (401)
+.+.|.+|.+.+...+... ...+++..|+.+.... . ..|+.. ++.... .....+++..+....
T Consensus 96 l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~--~--~~dp~~~~~~~l~~~~~----~~~D~ViIDT~G~~~ 167 (272)
T TIGR00064 96 LKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQK--E--GADPAAVAFDAIQKAKA----RNIDVVLIDTAGRLQ 167 (272)
T ss_pred HHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCC--C--CCCHHHHHHHHHHHHHH----CCCCEEEEeCCCCCc
Confidence 4466778877765433221 2334566665443222 2 124432 222222 234677887654221
Q ss_pred ---ccccchHHHHHHhhh----cCCCcEEEEecc
Q 015729 151 ---GVTNNLSKVRKLLDE----YRHPALFLVDGV 177 (401)
Q Consensus 151 ---G~~~~l~~i~~l~~~----~~~~~~li~D~a 177 (401)
..+..++++.+.+++ .+.++++++|+.
T Consensus 168 ~d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~ 201 (272)
T TIGR00064 168 NKVNLMDELKKIKRVIKKVDKDAPDEVLLVLDAT 201 (272)
T ss_pred chHHHHHHHHHHHHHHhcccCCCCceEEEEEECC
Confidence 111235555555551 147889999986
Done!